Query 038880
Match_columns 276
No_of_seqs 136 out of 337
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 06:28:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038880.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038880hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2uw1_A Desaturase, plastid del 100.0 1.5E-99 5E-104 714.5 24.9 274 1-276 50-338 (338)
2 1za0_A Possible acyl-[acyl-car 100.0 3E-72 1E-76 517.5 7.5 211 1-229 45-271 (275)
3 1j30_A 144AA long hypothetical 94.9 0.047 1.6E-06 44.3 6.0 60 95-154 80-140 (144)
4 2fkz_A Bacterioferritin; ferro 94.4 0.3 1E-05 38.7 9.7 61 95-155 82-142 (155)
5 3uoi_A Bacterioferritin, BFR; 94.0 0.38 1.3E-05 38.7 9.7 62 95-156 84-145 (161)
6 1jgc_A Bacterioferritin, BFR; 94.0 0.39 1.3E-05 38.5 9.7 63 95-157 82-144 (161)
7 2y3q_A Bacterioferritin; metal 93.8 0.45 1.5E-05 37.9 9.7 63 95-157 82-144 (158)
8 3qhb_A Symerythrin, ORF180; fo 93.6 0.11 3.9E-06 44.7 6.0 44 114-157 135-178 (179)
9 4am5_A Bacterioferritin; metal 93.3 0.54 1.8E-05 38.4 9.5 60 95-154 82-141 (159)
10 3r2k_A Bacterioferritin, BFR; 93.2 0.58 2E-05 37.4 9.4 62 95-156 81-143 (154)
11 3fvb_A Bacterioferritin; niaid 93.2 0.57 1.9E-05 39.2 9.7 62 95-156 103-164 (182)
12 2oh3_A Rubrerythrin, COG1633: 93.1 0.16 5.5E-06 41.9 6.0 59 95-153 5-63 (167)
13 3pwf_A Rubrerythrin; non heme 93.0 0.14 4.8E-06 43.5 5.7 60 95-154 67-127 (170)
14 1lko_A Rubrerythrin all-iron(I 93.0 0.2 6.9E-06 43.0 6.7 62 94-155 81-143 (191)
15 1nfv_A Bacterioferritin; 24 su 92.6 0.32 1.1E-05 40.1 7.3 66 95-160 87-152 (179)
16 2fzf_A Hypothetical protein; s 92.6 0.089 3E-06 43.7 3.8 58 95-155 20-77 (175)
17 3gvy_A Bacterioferritin; iron 92.4 0.52 1.8E-05 38.0 8.1 63 95-157 82-144 (161)
18 4di0_A Rubrerythrin; ssgcid, s 92.2 0.15 5.2E-06 42.1 4.6 41 113-153 101-141 (144)
19 2fzf_A Hypothetical protein; s 92.2 0.16 5.3E-06 42.2 4.7 57 97-156 107-163 (175)
20 2qqy_A Sigma B operon; dodecam 91.9 1.2 4.2E-05 34.8 9.6 58 95-152 85-142 (149)
21 1vjx_A Putative ferritin-like 91.7 0.11 3.6E-06 42.7 3.2 54 94-151 13-66 (157)
22 3qb9_A Bacterioferritin, BFR; 91.7 1.2 4.2E-05 36.3 9.7 61 95-155 84-144 (174)
23 2oh3_A Rubrerythrin, COG1633: 91.4 0.29 9.9E-06 40.3 5.6 57 95-154 93-149 (167)
24 2vzb_A Putative bacterioferrit 90.8 0.59 2E-05 37.8 6.8 59 95-154 102-160 (170)
25 1vjx_A Putative ferritin-like 90.5 0.48 1.6E-05 38.7 6.0 56 95-153 100-155 (157)
26 2jd6_0 Ferritin homolog, ferri 90.4 4.7 0.00016 32.9 12.1 78 95-172 82-160 (174)
27 1yuz_A Nigerythrin; rubrythrin 90.3 0.35 1.2E-05 42.0 5.3 61 95-155 103-164 (202)
28 1yuz_A Nigerythrin; rubrythrin 86.8 2.8 9.5E-05 36.3 8.6 86 112-207 45-140 (202)
29 1krq_A Ferritin; H-chain like 85.7 2 6.7E-05 35.5 6.9 64 94-157 81-144 (167)
30 1eum_A Ferritin 1; ECFTNA, met 84.9 6.7 0.00023 32.0 9.8 65 94-158 81-145 (165)
31 3oj5_A Ferritin family protein 84.6 6.6 0.00022 32.8 9.7 76 95-172 87-162 (189)
32 3ee4_A Probable ribonucleoside 84.1 1.4 4.7E-05 40.8 5.7 35 126-160 197-231 (323)
33 1syy_A Ribonucleoside-diphosph 83.6 0.89 3E-05 42.3 4.2 35 126-160 213-247 (346)
34 2rcc_A Ribonucleoside-diphosph 82.5 1.9 6.4E-05 40.0 5.9 35 126-160 206-240 (346)
35 3uno_A Probable bacterioferrit 80.8 11 0.00036 32.1 9.7 79 95-175 87-165 (189)
36 3k6c_A Uncharacterized protein 80.3 2.1 7.3E-05 33.3 4.5 36 123-161 43-78 (95)
37 1mxr_A Ribonucleotide reductas 80.1 1.3 4.6E-05 41.6 4.0 35 126-160 224-260 (375)
38 1s3q_A Ferritin; ferroxidase, 79.9 13 0.00043 30.9 9.6 78 94-171 83-161 (173)
39 1zpy_A Hypothetical protein NE 78.6 4.3 0.00015 31.6 5.8 49 107-161 30-78 (95)
40 3qhb_A Symerythrin, ORF180; fo 75.9 2.5 8.5E-05 36.3 4.2 40 114-153 44-83 (179)
41 2e0z_A Virus-like particle; ba 74.6 0.62 2.1E-05 43.9 0.0 53 99-154 23-75 (345)
42 2o1z_A Ribonucleotide reductas 73.8 3 0.0001 38.3 4.5 34 126-160 211-244 (311)
43 3mjo_A Ribonucleotide reductas 73.1 5.5 0.00019 36.2 6.0 70 95-167 155-228 (296)
44 3bvf_A Ferritin; iron storage, 72.9 23 0.00079 29.3 9.4 62 94-155 95-156 (181)
45 3dhz_A Ribonucleotide reductas 71.4 6.2 0.00021 36.4 6.0 68 95-166 156-228 (329)
46 2v2p_A Ferritin light chain; m 71.0 26 0.00088 28.9 9.2 61 94-154 90-151 (174)
47 2inc_A Toluene, O-xylene monoo 70.4 5.2 0.00018 39.3 5.5 63 95-157 183-247 (491)
48 3olj_A Ribonucleoside-diphosph 70.4 4.1 0.00014 36.8 4.5 34 126-159 188-221 (286)
49 3n37_A Ribonucleoside-diphosph 70.2 7 0.00024 35.9 6.0 66 95-164 146-216 (319)
50 2itb_A TRNA-(MS(2)IO(6)A)-hydr 68.9 5.7 0.00019 34.9 4.8 67 97-167 113-180 (206)
51 1rcd_A L ferritin; iron storag 68.4 30 0.001 28.5 9.1 61 94-154 91-152 (173)
52 1o9i_A Pseudocatalase; oxidore 68.4 4.9 0.00017 36.6 4.4 48 104-154 145-192 (266)
53 4a58_A Ribonucleoside-diphosph 68.2 4.9 0.00017 37.1 4.5 35 126-160 196-232 (324)
54 1ji5_A DLP-1; dodecamer, four- 68.1 29 0.00098 26.9 8.5 57 95-151 85-141 (142)
55 3ge3_A Toluene-4-monooxygenase 67.9 8.1 0.00028 38.1 6.2 103 110-213 201-322 (500)
56 1mty_D Methane monooxygenase h 67.9 7.2 0.00025 38.5 5.9 65 95-160 182-248 (512)
57 2p1i_A Ribonucleotide reductas 67.3 4 0.00014 38.1 3.7 31 126-156 212-242 (349)
58 4dr0_A Ribonucleoside-diphosph 66.7 8.5 0.00029 35.9 5.9 41 126-166 205-245 (350)
59 1vlg_A Ferritin; TM1128, struc 66.5 18 0.00061 29.7 7.3 63 95-157 96-158 (176)
60 1mty_B Methane monooxygenase h 65.9 21 0.0007 33.9 8.4 52 109-160 251-303 (384)
61 2vxx_A Starvation induced DNA 65.8 36 0.0012 28.3 9.2 58 95-152 113-170 (192)
62 3u52_A Phenol hydroxylase comp 65.6 11 0.00037 37.2 6.6 94 116-213 209-326 (511)
63 3a68_A Sferh-4, ferritin-4, ch 64.9 32 0.0011 29.6 8.9 74 97-170 130-204 (212)
64 1h0o_A Ribonucleoside-diphosph 64.9 5.9 0.0002 37.6 4.5 31 126-156 253-283 (390)
65 1jk0_B RNR Y4, ribonucleoside- 64.5 6.2 0.00021 36.7 4.5 32 126-157 206-237 (345)
66 2cih_A Ferritin heavy chain; a 64.2 42 0.0014 28.0 9.3 62 94-155 95-157 (183)
67 3qz3_A Ferritin; structural ge 64.1 50 0.0017 27.6 9.8 64 95-158 91-154 (184)
68 4a58_A Ribonucleoside-diphosph 63.8 21 0.00072 32.8 7.9 47 115-161 88-134 (324)
69 2v8t_A Manganese-containing ps 63.3 6.8 0.00023 36.2 4.4 50 103-155 151-200 (302)
70 3pwf_A Rubrerythrin; non heme 63.1 16 0.00056 30.6 6.4 82 112-207 23-104 (170)
71 3chh_A P-aminobenzoate N-oxyge 62.9 12 0.0004 35.0 6.0 45 127-171 214-258 (336)
72 3pvt_A Phenylacetic acid degra 61.1 51 0.0017 30.4 9.9 115 97-222 118-241 (311)
73 2inc_B Toluene, O-xylene monoo 60.2 19 0.00064 33.2 6.9 63 95-157 207-271 (322)
74 1j30_A 144AA long hypothetical 59.8 19 0.00066 28.5 6.1 48 106-153 19-66 (144)
75 2hz8_A De novo designed DIIRON 59.4 3.4 0.00012 33.3 1.4 43 107-152 44-86 (115)
76 1jk0_A RNR Y2, ribonucleoside- 59.1 8.6 0.00029 36.9 4.5 34 126-160 279-312 (419)
77 3sxm_A Transcriptional regulat 56.5 53 0.0018 24.8 8.0 61 108-171 57-127 (140)
78 2rcc_A Ribonucleoside-diphosph 55.8 20 0.00069 33.0 6.3 39 117-155 96-134 (346)
79 3ge3_B Toluene-4-monooxygenase 55.1 21 0.0007 33.1 6.2 65 95-160 211-277 (327)
80 3ka8_A Ferritin, middle subuni 54.9 77 0.0026 26.1 9.3 65 94-158 91-156 (176)
81 3ee4_A Probable ribonucleoside 54.1 29 0.001 31.8 7.1 30 125-154 95-124 (323)
82 1syy_A Ribonucleoside-diphosph 52.8 20 0.00069 33.0 5.8 41 120-161 100-140 (346)
83 3vnx_A Ferritin; 4-helix bundl 52.0 32 0.0011 29.5 6.6 61 97-157 125-186 (204)
84 4di0_A Rubrerythrin; ssgcid, s 51.8 31 0.001 28.0 6.1 41 112-152 29-69 (144)
85 1jig_A DLP-2; dodecamer, four- 51.0 36 0.0012 26.6 6.3 56 95-150 89-144 (146)
86 1n1q_A DPS protein; four-helix 51.0 44 0.0015 26.2 6.8 57 95-151 92-148 (149)
87 2nl9_A Fusion protein consisti 49.8 12 0.00042 30.7 3.4 42 130-172 40-82 (157)
88 1nfv_A Bacterioferritin; 24 su 47.8 37 0.0013 27.4 6.0 48 106-153 22-69 (179)
89 2w3p_A Benzoyl-COA-dihydrodiol 46.2 6.9 0.00024 39.1 1.5 52 1-63 477-528 (556)
90 4hw4_A Induced myeloid leukemi 45.9 29 0.00098 28.7 5.1 32 140-172 51-82 (157)
91 3olj_A Ribonucleoside-diphosph 44.6 54 0.0018 29.4 7.1 42 119-161 84-125 (286)
92 2o1z_A Ribonucleotide reductas 44.4 23 0.00079 32.3 4.7 37 119-155 108-144 (311)
93 2c41_A DPS family DNA-binding 42.8 1.2E+02 0.0042 23.9 8.8 57 95-151 94-150 (158)
94 3ihu_A Transcriptional regulat 42.7 1.1E+02 0.0037 25.4 8.4 60 109-171 140-210 (222)
95 2kua_A BCL-2-like protein 10; 42.2 37 0.0013 28.5 5.3 43 129-176 43-86 (170)
96 2wj6_A 1H-3-hydroxy-4-oxoquina 41.7 12 0.0004 31.8 2.2 61 173-247 58-121 (276)
97 1ohu_A Apoptosis regulator CED 41.5 55 0.0019 27.6 6.3 50 129-179 45-95 (175)
98 1mhy_B Methane monooxygenase h 40.7 11 0.00037 36.0 1.9 65 95-159 243-310 (395)
99 3e6s_A Ferritin; iron storage, 40.5 1.5E+02 0.0051 24.2 10.8 66 95-160 83-148 (168)
100 2fjc_A Antigen TPF1; mini ferr 40.4 59 0.002 26.1 6.1 45 107-151 110-154 (156)
101 1tjo_A Iron-rich DPSA-homolog 40.1 1.4E+02 0.0049 24.4 8.7 55 97-151 116-170 (182)
102 3om8_A Probable hydrolase; str 39.4 18 0.00062 30.2 3.0 61 173-247 58-120 (266)
103 3kxu_A Ferritin; iron storage 39.2 1.7E+02 0.0059 24.5 9.3 65 94-158 91-156 (191)
104 3pk1_A Induced myeloid leukemi 39.1 30 0.001 29.7 4.3 42 130-172 73-115 (189)
105 2y3q_A Bacterioferritin; metal 38.3 74 0.0025 24.6 6.3 47 107-153 18-64 (158)
106 2bk6_A Non-heme iron-containin 37.5 50 0.0017 26.5 5.2 46 106-151 105-150 (156)
107 2d5k_A DPS, DPS family protein 36.7 95 0.0032 24.7 6.8 57 95-151 91-147 (156)
108 2gs4_A Protein YCIF; stress pr 34.5 77 0.0026 26.3 6.0 47 108-154 111-157 (166)
109 3sxy_A Transcriptional regulat 34.3 1.5E+02 0.0051 24.5 7.9 60 109-171 133-202 (218)
110 1mxr_A Ribonucleotide reductas 34.2 64 0.0022 30.0 6.0 46 120-166 95-140 (375)
111 1h0o_A Ribonucleoside-diphosph 34.0 74 0.0025 30.0 6.5 37 119-155 149-185 (390)
112 2cf7_A DPR; peroxide resistanc 34.0 60 0.0021 26.5 5.2 46 107-152 115-160 (165)
113 2chp_A MRGA, metalloregulation 33.8 71 0.0024 25.5 5.6 45 106-150 107-151 (153)
114 3afi_E Haloalkane dehalogenase 33.5 18 0.00061 31.2 2.0 61 173-247 60-122 (316)
115 2hs5_A Putative transcriptiona 33.3 1.5E+02 0.0051 25.1 7.9 59 110-171 150-222 (239)
116 2yjk_A AFP, DPS; metal-binding 33.1 82 0.0028 25.4 5.9 45 107-152 116-160 (161)
117 1lko_A Rubrerythrin all-iron(I 32.8 64 0.0022 27.1 5.3 45 107-151 20-64 (191)
118 2p1i_A Ribonucleotide reductas 32.7 53 0.0018 30.4 5.2 36 120-155 110-145 (349)
119 1jgc_A Bacterioferritin, BFR; 32.7 1E+02 0.0035 23.8 6.3 47 107-153 18-64 (161)
120 2wlu_A DPS-like peroxide resis 32.6 64 0.0022 26.6 5.2 45 107-151 125-169 (175)
121 3hl1_A Ferritin like protein; 32.0 49 0.0017 30.7 4.8 47 107-154 22-68 (317)
122 1o9r_A Agrobacterium tumefacie 31.6 66 0.0023 25.9 5.1 44 107-150 114-157 (162)
123 3kwo_A Putative bacterioferrit 31.4 1E+02 0.0035 24.6 6.1 45 107-151 102-146 (152)
124 4dr0_A Ribonucleoside-diphosph 31.1 1E+02 0.0035 28.5 6.9 37 119-155 97-134 (350)
125 2w3l_A BCL2-XL, apoptosis regu 30.9 49 0.0017 26.5 4.1 35 140-175 43-77 (144)
126 2c2u_A DPS, DNA-binding stress 30.7 94 0.0032 26.6 6.1 45 107-151 157-201 (207)
127 2puj_A 2-hydroxy-6-OXO-6-pheny 30.5 23 0.00079 29.7 2.2 62 173-247 68-131 (286)
128 2xgw_A Peroxide resistance pro 30.4 71 0.0024 27.2 5.2 45 107-151 141-185 (199)
129 3ilc_A BCL-2-like protein 1; a 30.1 22 0.00075 30.9 1.9 44 128-172 86-130 (197)
130 3qb9_A Bacterioferritin, BFR; 30.1 1.2E+02 0.0039 24.2 6.3 47 107-153 20-66 (174)
131 2y6w_A BCL-2-like protein 2; a 30.0 69 0.0024 26.8 5.0 43 131-174 57-100 (177)
132 3n37_A Ribonucleoside-diphosph 29.7 85 0.0029 28.5 6.0 37 120-156 78-114 (319)
133 3mjo_A Ribonucleotide reductas 29.7 87 0.003 28.2 6.0 37 120-156 87-123 (296)
134 2fkz_A Bacterioferritin; ferro 29.4 1.3E+02 0.0044 22.9 6.3 47 107-153 18-64 (155)
135 2wfl_A Polyneuridine-aldehyde 28.8 32 0.0011 28.6 2.7 62 173-247 42-106 (264)
136 1iup_A META-cleavage product h 28.6 35 0.0012 28.6 3.0 62 173-247 59-122 (282)
137 3iq1_A DPS family protein; csg 28.6 94 0.0032 25.0 5.5 45 107-151 114-158 (159)
138 3p7i_A PHND, subunit of alkylp 28.3 1.2E+02 0.0041 26.9 6.7 61 193-255 243-310 (321)
139 1azw_A Proline iminopeptidase; 27.1 36 0.0012 28.4 2.8 63 173-247 65-129 (313)
140 1xkl_A SABP2, salicylic acid-b 27.0 40 0.0014 28.3 3.0 62 173-247 36-100 (273)
141 3dhz_A Ribonucleotide reductas 26.8 86 0.0029 28.6 5.5 35 122-156 90-124 (329)
142 4aq3_A Apoptosis regulator BCL 26.2 93 0.0032 25.9 5.2 43 129-172 55-98 (169)
143 2pyb_A NAPA, neutrophil activa 25.9 97 0.0033 24.6 5.1 45 106-150 102-146 (151)
144 2a5y_A Apoptosis regulator CED 25.5 85 0.0029 27.1 4.9 48 131-179 67-115 (204)
145 1hw1_A FADR, fatty acid metabo 25.3 2.3E+02 0.0078 23.5 7.6 61 108-171 143-217 (239)
146 2qqy_A Sigma B operon; dodecam 25.2 75 0.0026 24.2 4.1 47 107-153 22-68 (149)
147 2xua_A PCAD, 3-oxoadipate ENOL 25.1 44 0.0015 27.5 2.9 61 173-247 57-119 (266)
148 3v48_A Aminohydrolase, putativ 25.0 37 0.0013 28.1 2.5 60 173-245 46-107 (268)
149 4am5_A Bacterioferritin; metal 24.8 1.6E+02 0.0056 23.2 6.3 44 107-150 18-61 (159)
150 2xmz_A Hydrolase, alpha/beta h 24.8 38 0.0013 27.8 2.4 58 173-243 47-106 (269)
151 2gyq_A YCFI, putative structur 24.6 79 0.0027 26.5 4.4 43 109-151 118-160 (173)
152 1q0r_A RDMC, aclacinomycin met 24.5 45 0.0015 27.9 2.9 64 173-247 56-121 (298)
153 3c6x_A Hydroxynitrilase; atomi 23.8 29 0.001 28.8 1.6 62 173-247 35-99 (257)
154 1wm1_A Proline iminopeptidase; 23.7 44 0.0015 27.9 2.7 63 173-247 68-132 (317)
155 1jk0_B RNR Y4, ribonucleoside- 23.4 96 0.0033 28.5 5.1 36 120-155 104-139 (345)
156 2clb_A DPS-like protein; DI-ir 22.9 1.7E+02 0.0059 24.1 6.2 62 95-161 112-173 (188)
157 4eve_A Neutrophil-activating p 22.9 1.7E+02 0.0059 23.7 6.1 44 107-150 119-162 (164)
158 3bf7_A Esterase YBFF; thioeste 22.8 46 0.0016 27.2 2.6 60 173-247 47-108 (255)
159 2ims_A Apoptosis regulator BAK 22.3 78 0.0027 26.1 3.9 32 140-172 71-102 (171)
160 1otk_A Protein PAAC, phenylace 22.2 4.1E+02 0.014 23.5 10.6 115 96-222 87-210 (249)
161 1u2e_A 2-hydroxy-6-ketonona-2, 21.4 44 0.0015 27.7 2.2 61 173-246 71-133 (289)
162 2wue_A 2-hydroxy-6-OXO-6-pheny 20.8 34 0.0012 28.9 1.4 61 173-246 70-132 (291)
163 2di3_A Bacterial regulatory pr 20.6 2.9E+02 0.0099 23.0 7.3 60 109-171 143-220 (239)
164 2yg9_A DNA-3-methyladenine gly 20.4 2.9E+02 0.01 23.5 7.4 117 126-252 39-162 (225)
No 1
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=100.00 E-value=1.5e-99 Score=714.53 Aligned_cols=274 Identities=68% Similarity=1.142 Sum_probs=266.5
Q ss_pred ChHHHHHHHHHHhcCCChhhHHhhhhhhhccccCChhhhhhhhhcCCCCCCCCCCCchhhhhh---------------hh
Q 038880 1 GFYEQVKELRERCKQLPAEYFVVLVGDMITEEALPTYQTMLNTIDGVRDETGASLTSWATWIR---------------YL 65 (276)
Q Consensus 1 ~f~~~v~~lr~~a~~Lpd~~~v~lv~~~lTEd~LPtY~~~l~~~~gv~~~~g~~~~~W~~W~~---------------YL 65 (276)
+|.++|++||+++++|||++++||+|||||||||||||++||++||+++++|+|+++|++|++ ||
T Consensus 50 ~F~~~~~~~~~~~~~l~d~~~v~lv~~~iTEd~LPtY~~~L~~~fgvrd~~g~~~~~w~~w~~~WtaEEnrHg~aL~~YL 129 (338)
T 2uw1_A 50 GFEEQVRELRERAKEIPDDYFVVLVGDMITEEALPTYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENRHGDLLNKYL 129 (338)
T ss_dssp THHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTHHHHHHHHTTSTTTSCSSSSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhcccccHhhccCCHHHHHHHHHHHHhhhcchHHHHHHHHHcCcccccCCCcchHHHHhhhHhHHHHHHHHHHHHHH
Confidence 599999999999999999999999999999999999999999999999999999999999987 99
Q ss_pred hhhcCCChHHHHHHHHHHHhcCCCCCCCCCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHH
Q 038880 66 YLSGCVDMKQIERSIQYLIRSGMDPKFENNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHEL 145 (276)
Q Consensus 66 ~~sg~vDp~~lE~~~~~li~~G~~~~~~~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~ 145 (276)
|+||+|||+++|+++|++|++||+|+++++||++|+||||||+||++||+|||++|+++|||+|++||++||+||+||+.
T Consensus 130 ~lsgrvDp~~lE~~~~~~i~~Gfd~~~~~~p~~~~vy~sfQE~AT~vsh~n~~r~A~~~gdPvLa~i~~~IA~DE~RH~~ 209 (338)
T 2uw1_A 130 YLSGRVDMRKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHAT 209 (338)
T ss_dssp HHHSSSCHHHHHHHHHHHHHHCCCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHhhccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhcccccccc
Q 038880 146 AYTKIVEKLFEIDPDDAILALAGMMKKTIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKLM 225 (276)
Q Consensus 146 fY~~iv~~~le~dPd~tm~Aia~~m~~~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~~ 225 (276)
||+++|+++|++|||++|.||++||+++|+||||+|+||+++++|+||+++||++||||+.+|.+||++||++|+|++++
T Consensus 210 ~Y~~~v~~~le~dpd~~~~Aia~vm~~~~~MPa~~m~dg~~~~~f~~~s~~a~r~GvYt~~dy~dil~~l~~~W~i~~~~ 289 (338)
T 2uw1_A 210 AYTKIVEKLAEIDPDTTVIAFADMMRKKITMPAHLMYDGSDELLFKHFTAVAQRLGVYSALDYCDILEFLVDKWNVERLT 289 (338)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCTTTTCCCSSCTTHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHTTGGGCC
T ss_pred HHHHHHHHHHhhCchhHHHHHHHHHHhcCcCCcccCcCCCChhhHHHHHHHHHHhCCCChHHHHHHHHHHHHHcCccccc
Confidence 99999999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhcchHHHHHHHHHHHhhHhhhCCCCcCceeeeCCcccC
Q 038880 226 GLTSEGRKARDFVCGLPSRIRRLEDKAQANMAKKACSTVPFSWVFGKDIRV 276 (276)
Q Consensus 226 gL~~eg~~Ar~~l~~l~~r~~r~~er~~~~~~~~~~~~~~f~wi~~~~~~~ 276 (276)
|||+||++||||||+||+|++||+||++.| +|+. .+++|||||+|+|.|
T Consensus 290 gl~~eg~~ard~l~~l~~r~~r~~er~~~~-~~~~-~~~~f~wi~~~~~~~ 338 (338)
T 2uw1_A 290 GLSDEGRKAQEYVCELGPKIRRLEERAQGR-AKEA-PTMPFSWIFDRQVKL 338 (338)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC-CEEEEGGGTTEEEEC
T ss_pred CCCHHHHHHHHHHHcchHHHHHHHHHhhhh-hhcC-CCCCeeEeecCcccC
Confidence 999999999999999999999999999999 4433 459999999999865
No 2
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=100.00 E-value=3e-72 Score=517.46 Aligned_cols=211 Identities=18% Similarity=0.202 Sum_probs=178.5
Q ss_pred ChHH-HHHHHHHHhcCCChhhHHhhhhhhhccccCChhhhhhhhhcCCCCCCCCCCCchhhhhh---------------h
Q 038880 1 GFYE-QVKELRERCKQLPAEYFVVLVGDMITEEALPTYQTMLNTIDGVRDETGASLTSWATWIR---------------Y 64 (276)
Q Consensus 1 ~f~~-~v~~lr~~a~~Lpd~~~v~lv~~~lTEd~LPtY~~~l~~~~gv~~~~g~~~~~W~~W~~---------------Y 64 (276)
+|.+ ++++||++++.|||++++||++||+|||||||||++|+++||. +++|++|++ |
T Consensus 45 ~F~~~~~~~~~~~~~~L~d~~~~~l~~~~itEd~LP~Y~~~L~~~~~~-------d~~w~~w~~~WtaEE~rHg~aL~~Y 117 (275)
T 1za0_A 45 NFAFLGGRDWDPSQSTLPRTITDACEILLILKDNLAGHHRELVEHFIL-------EDWWGRWLGRWTAEEHLHAIALREY 117 (275)
T ss_dssp CCGGGTSCCCCGGGCCSCHHHHHHHHHHHHHHHC----------------------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhcccccccHhhccCCHHHHHHHHHHHHHhhcchHHHHHHHHhcCC-------CchHHHHhhhHhHHHHHHHHHHHHH
Confidence 4777 8999999999999999999999999999999999999999997 578998887 9
Q ss_pred hhhhcCCChHHHHHHHHHHHhcCCCCCCCCCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHH
Q 038880 65 LYLSGCVDMKQIERSIQYLIRSGMDPKFENNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHE 144 (276)
Q Consensus 65 L~~sg~vDp~~lE~~~~~li~~G~~~~~~~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~ 144 (276)
|++||+|||+++|++++++|++||+|+ .++||++|+|+||||+||++||+|||+ .+|||+|++||++||+||+||+
T Consensus 118 L~~sg~vdp~~lE~~~~~~i~~g~~~~-~~~p~~~~vy~~fqE~aT~v~y~n~a~---~~~dPvL~~i~~~IA~DE~RH~ 193 (275)
T 1za0_A 118 LVVTREVDPVANEDVRVQHVMKGYRAE-KYTQVETLVYMAFYERCGAVFCRNLAA---QIEEPILAGLIDRIARDEVRHE 193 (275)
T ss_dssp HHHHTCSCTTTTTCTTC-----------CCCHHHHHHHHHHHHHHHHHHHHHHHH---HCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHhhcCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHH---hcCChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 689999999999999999999999997 5999999999999999999999
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHhhccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc
Q 038880 145 LAYTKIVEKLFEIDPDDAILALAGMMKKTIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL 224 (276)
Q Consensus 145 ~fY~~iv~~~le~dPd~tm~Aia~~m~~~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~ 224 (276)
.||+++|+++|++|||++|.||++|| ++|+||||+|++| +||++++|++||||+.+|++||+++|++|+|+++
T Consensus 194 ~~y~~~v~~~le~dpd~~~~A~a~~~-~~~~MP~~~m~~~------~~~~~~~~~~GvY~~~dy~~vl~~l~~~W~v~~~ 266 (275)
T 1za0_A 194 EFFANLVTHCLDYTRDETIAAIAARA-ADLDVLGADIEAY------RDKLQNVADAGIFGKPQLRQLISDRITAWGLAGE 266 (275)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHH-HHCCCTTTTSTTC------HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHH-hcCcCCcCcCchh------hHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcccc
Confidence 99999999999999999999999999 5999999999876 5699999999999999999999999999999999
Q ss_pred cCCCH
Q 038880 225 MGLTS 229 (276)
Q Consensus 225 ~gL~~ 229 (276)
+||+.
T Consensus 267 ~~L~~ 271 (275)
T 1za0_A 267 PSLKQ 271 (275)
T ss_dssp GGGGG
T ss_pred ccHHH
Confidence 99974
No 3
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=94.86 E-value=0.047 Score=44.34 Aligned_cols=60 Identities=18% Similarity=0.144 Sum_probs=53.3
Q ss_pred CCcchhhhhhhhhhhH-HHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERAT-FISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT-~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~ 154 (276)
++..+|-...=+|.-. ...+.+.+++|+..||+..+.++..|+.||..|...|..+++.+
T Consensus 80 ~~~e~L~~al~~E~~~~~~~y~~~~~~A~~egd~~~~~~f~~i~~~E~~H~~~~~~~l~~i 140 (144)
T 1j30_A 80 TLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQL 140 (144)
T ss_dssp SHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777777788887 57789999999999999999999999999999999999998764
No 4
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=94.37 E-value=0.3 Score=38.65 Aligned_cols=61 Identities=11% Similarity=0.004 Sum_probs=52.6
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
++...+-...=.|...-.++++..++|...|||....++..|..+|..|..++..+++.+-
T Consensus 82 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~i~ 142 (155)
T 2fkz_A 82 HTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASRELLEDILESEEDHIDWLETQLDLID 142 (155)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666778888888999999998889999999999999999999999999987653
No 5
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=94.00 E-value=0.38 Score=38.74 Aligned_cols=62 Identities=16% Similarity=0.050 Sum_probs=50.9
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHh
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFE 156 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le 156 (276)
++...|-...=.|....-+++...++|.+.|||....+|..|..||..|..++...++.+=.
T Consensus 84 ~~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~i~~ 145 (161)
T 3uoi_A 84 TLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDK 145 (161)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555577777778889999998999999999999999999999999999876543
No 6
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=94.00 E-value=0.39 Score=38.45 Aligned_cols=63 Identities=14% Similarity=0.110 Sum_probs=53.9
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhc
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEI 157 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~ 157 (276)
++...+-...=.|.....+++++.++|...|||....+|..|..+|..|..++..+++.+-..
T Consensus 82 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l~~~ 144 (161)
T 1jgc_A 82 GPRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNIFESLITDEEGHVDFLETQISLYDRL 144 (161)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445667667777888888899999999888999999999999999999999999999775443
No 7
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=93.80 E-value=0.45 Score=37.94 Aligned_cols=63 Identities=11% Similarity=-0.069 Sum_probs=54.2
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhc
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEI 157 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~ 157 (276)
++...+-...=.|.....+++++.++|...||+....++..|..||..|..++..+++.+=..
T Consensus 82 ~~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l~~~ 144 (158)
T 2y3q_A 82 DVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKM 144 (158)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555677777777888888899999999888999999999999999999999999998765443
No 8
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=93.59 E-value=0.11 Score=44.71 Aligned_cols=44 Identities=30% Similarity=0.426 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhc
Q 038880 114 HGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEI 157 (276)
Q Consensus 114 h~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~ 157 (276)
|...++.|++.|++..++....|+.+|++|..-|+.+++.+.++
T Consensus 135 Yp~fA~~A~eEG~~eiA~~F~~ia~~Ek~H~~ry~~ll~~l~~~ 178 (179)
T 3qhb_A 135 YPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLEV 178 (179)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 77789999999999999999999999999999999999887654
No 9
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=93.27 E-value=0.54 Score=38.36 Aligned_cols=60 Identities=15% Similarity=0.058 Sum_probs=50.5
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~ 154 (276)
++...|-...=.|+...-++.+..++|...||+....++..|..||..|...+...++.+
T Consensus 82 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~il~eEeeH~~~l~~~L~~i 141 (159)
T 4am5_A 82 TVKEVLESDLAAEREARALYQEGAAYAASVGDFPSKNLFEELMGDEEHHIDFLETQLDLV 141 (159)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555567777777899999999999999999999999999999999999888654
No 10
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=93.22 E-value=0.58 Score=37.45 Aligned_cols=62 Identities=15% Similarity=0.057 Sum_probs=50.9
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhch-hhHHHHHHHHHHHHHHh
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASD-EKRHELAYTKIVEKLFE 156 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~D-E~rH~~fY~~iv~~~le 156 (276)
++...|-...-.|...--++++..++|.+.|||....+|..|..| |..|..++...++.+=.
T Consensus 81 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~e~ee~h~~~l~~~l~~i~~ 143 (154)
T 3r2k_A 81 TVPEMLEADLKLERHVRAALAKGIALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGLIAR 143 (154)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555556777777788999999989999999999999999 99999999998876533
No 11
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=93.17 E-value=0.57 Score=39.21 Aligned_cols=62 Identities=16% Similarity=0.066 Sum_probs=51.4
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHh
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFE 156 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le 156 (276)
++...|-...-.|....-++++..++|...||+....+|..|..||..|..++.+.++.+=.
T Consensus 103 ~~~e~l~~~l~~E~~~~~~y~~~i~~A~~~~D~~t~~~L~~il~eEe~h~~~l~~~l~~i~~ 164 (182)
T 3fvb_A 103 NVKEVLEADLKGEYDARASYKESREICDKLGDYVSKQLFDELLADEEGHIDFLETQLDLLAK 164 (182)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555655556677777788999999988999999999999999999999999999876543
No 12
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=93.06 E-value=0.16 Score=41.89 Aligned_cols=59 Identities=10% Similarity=-0.041 Sum_probs=50.9
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEK 153 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~ 153 (276)
+....+.+.--.|....-+|..+|+.-+..++|.++++...||.||..|..++.++...
T Consensus 5 ~~~e~L~~Ai~~E~~~~~~Y~~lA~~~~~~~~~~~k~~f~~LA~eE~~H~~~l~~~~~~ 63 (167)
T 2oh3_A 5 TLAEFLAHAIALETEAAERYVELADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRA 63 (167)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45667788888899999999988885556889999999999999999999999998654
No 13
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=93.03 E-value=0.14 Score=43.49 Aligned_cols=60 Identities=17% Similarity=0.017 Sum_probs=50.0
Q ss_pred CCcchhhhhhhhhhh-HHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERA-TFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 95 ~p~~~~vYtsfQE~A-T~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~ 154 (276)
+...+|--..-.|.- ....|...++.|++.||+..+.++..|+.||++|...|..+++.+
T Consensus 67 ~t~enL~~a~~gE~~e~~~mY~~~a~~A~eeg~~~~a~~f~~i~~~E~~H~~~~~~~l~~l 127 (170)
T 3pwf_A 67 KTPENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKA 127 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 335666666666664 345577899999999999999999999999999999999998876
No 14
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=93.00 E-value=0.2 Score=43.00 Aligned_cols=62 Identities=21% Similarity=0.239 Sum_probs=54.2
Q ss_pred CCCcchhhhhhhhh-hhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 94 NNPYNGFIYTSFQE-RATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 94 ~~p~~~~vYtsfQE-~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
+++..+|--+.=+| ...-..+.+.++.|++.||...+.++..|+.+|..|+.-|+++++.+-
T Consensus 81 ~s~~e~l~~al~~E~~e~t~~y~~~~~~A~eegd~~~~~~f~~~~~~E~ehe~~~~~~l~~l~ 143 (191)
T 1lko_A 81 ADTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNIK 143 (191)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 46778888888888 555556889999999999999999999999999999999999998753
No 15
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=92.60 E-value=0.32 Score=40.12 Aligned_cols=66 Identities=21% Similarity=0.208 Sum_probs=57.6
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD 160 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd 160 (276)
++...|-...=.|.....+++++.++|...||+....+|..|..||..|...+..+++.+-....+
T Consensus 87 ~~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~l~~~g~~ 152 (179)
T 1nfv_A 87 AVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDT 152 (179)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
Confidence 566777777778888888899999999889999999999999999999999999999887666544
No 16
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=92.58 E-value=0.089 Score=43.68 Aligned_cols=58 Identities=17% Similarity=0.043 Sum_probs=50.7
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
+....+.+..-.|....-+|...|+. ..||.++.++..||.+|..|...+.+++..++
T Consensus 20 ~~~e~L~~A~~~E~~a~~~Y~~~A~~---~~~~~~~~~f~~lA~~E~~H~~~l~~~~~~l~ 77 (175)
T 2fzf_A 20 SLEELLGMAIKAEIGAREFYKSLAEK---IKIEALKEKINWLAEEEKKHEALLRKLYSQMF 77 (175)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHS---CCCTTHHHHHHHHHHHTHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45667888888999999999977775 55899999999999999999999999998764
No 17
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=92.39 E-value=0.52 Score=38.03 Aligned_cols=63 Identities=10% Similarity=-0.050 Sum_probs=51.4
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhc
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEI 157 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~ 157 (276)
++...|-...=.|...--+++...++|...|||....+|..|..||..|..++...++.+=..
T Consensus 82 ~~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~i~~~ 144 (161)
T 3gvy_A 82 TLRETLDADLAAEHDARTLYIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDLMGSI 144 (161)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 445556655556777777788888999889999999999999999999999999998766443
No 18
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=92.19 E-value=0.15 Score=42.08 Aligned_cols=41 Identities=24% Similarity=0.327 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHH
Q 038880 113 SHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEK 153 (276)
Q Consensus 113 sh~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~ 153 (276)
-|...++.|++.|++..+.+...|+.||++|..-|..+++.
T Consensus 101 ~Y~~~a~~A~~eG~~~ia~~f~~~a~~E~~Ha~~~~~~l~~ 141 (144)
T 4di0_A 101 MYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDG 141 (144)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 47778899999999999999999999999999999998864
No 19
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=92.16 E-value=0.16 Score=42.16 Aligned_cols=57 Identities=11% Similarity=0.009 Sum_probs=46.4
Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHh
Q 038880 97 YNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFE 156 (276)
Q Consensus 97 ~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le 156 (276)
...+-...=.|..+..+|...++. ..||...+++..||.||..|...+.++++.+-.
T Consensus 107 ~~~L~~ai~~E~~a~~~Y~~~a~~---~~d~~~r~l~~~ia~eE~~H~~~l~~~l~~l~~ 163 (175)
T 2fzf_A 107 IDLIRWAMKAEEIAAEFYLKLEEM---VKEEEKKRLMRYLADMERGHYYTLRAEYELLLN 163 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT---SCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445556666788888889977664 559999999999999999999999999876543
No 20
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=91.89 E-value=1.2 Score=34.81 Aligned_cols=58 Identities=14% Similarity=0.090 Sum_probs=50.2
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVE 152 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~ 152 (276)
++...+-...=.|.....+++...++|...||+....++..|..||..|..+++.++.
T Consensus 85 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~ 142 (149)
T 2qqy_A 85 DVREMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKLEDMIADETNHMEELDRLLN 142 (149)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3445666677778888888999999998889999999999999999999999998775
No 21
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=91.69 E-value=0.11 Score=42.72 Aligned_cols=54 Identities=11% Similarity=-0.010 Sum_probs=47.0
Q ss_pred CCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 94 NNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 94 ~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
+++...+.+.---|....-+|.++|. +++|.+.+++..||.+|.+|..++.++-
T Consensus 13 ~~~~e~L~~Ai~~E~~~~~~Y~~lA~----~~~~~~k~lF~~LA~eE~~H~~~l~~l~ 66 (157)
T 1vjx_A 13 MKVSDILTVAIRLEEEGERFYRELSE----HFNGEIKKTFLELADQERIHAEIFRKMS 66 (157)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHHHTT----SCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 35667788888889999999997666 4599999999999999999999999994
No 22
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=91.69 E-value=1.2 Score=36.32 Aligned_cols=61 Identities=16% Similarity=0.044 Sum_probs=53.2
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
++...+-...=.|.....+++++.++|...||+....++..|..+|..|...+...++.+=
T Consensus 84 ~~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~l~eEe~h~~~l~~~l~~i~ 144 (174)
T 3qb9_A 84 TLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMD 144 (174)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566777777778888888999999999899999999999999999999999999887653
No 23
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=91.45 E-value=0.29 Score=40.32 Aligned_cols=57 Identities=23% Similarity=0.313 Sum_probs=46.8
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~ 154 (276)
++...+-+.-=-|..+..+|..++. ...||...+++..||.||..|.....++.+.+
T Consensus 93 ~~~~~l~~A~~~E~~a~~fY~~~a~---~~~d~~~k~~~~~la~eE~~H~~~l~~~~~~~ 149 (167)
T 2oh3_A 93 TPYHALRYARDNEIRGMEYYKEAAA---NSADPEVKRLGADFAAEEAEHVVALDKWIEKT 149 (167)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3445566666678999999996655 56799999999999999999999999887654
No 24
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=90.78 E-value=0.59 Score=37.79 Aligned_cols=59 Identities=15% Similarity=0.221 Sum_probs=50.6
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~ 154 (276)
++...+-...=.|....-++++..++|+.. ||....++..|..+|..|...+..+++.+
T Consensus 102 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~-D~~t~~~l~~~~~ee~~h~~~l~~~l~~l 160 (170)
T 2vzb_A 102 DSVSLLNQNVSSERCAILRYQEIANFTNGK-DYTTCDIAKHILAEEEEHEQDLQDYLTDI 160 (170)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666777888888899999998766 99999999999999999999999988754
No 25
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=90.52 E-value=0.48 Score=38.74 Aligned_cols=56 Identities=11% Similarity=-0.024 Sum_probs=46.5
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEK 153 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~ 153 (276)
++...+-..-=-|+.+..+|..++. ...||...+++..||.||..|.....+++..
T Consensus 100 ~~~~~l~~ai~~E~~a~~~Y~~~a~---~~~d~~~k~l~~~la~eE~~H~~~l~~~~~~ 155 (157)
T 1vjx_A 100 TLKEVLDIAISVEKDSIILYYELKD---GLVNSDAQKTVKKIIDQEKEHLRKLLEMKRE 155 (157)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH---HCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3455666667789999999996666 5679999999999999999999998888754
No 26
>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0
Probab=90.38 E-value=4.7 Score=32.93 Aligned_cols=78 Identities=19% Similarity=0.161 Sum_probs=63.4
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCc-hhHHHHHHHHHhh
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDP-DDAILALAGMMKK 172 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dP-d~tm~Aia~~m~~ 172 (276)
++...|-...-.|+...-.++++.++|...||+....++..|..++..|...++.+++.+=.+-. ...+--|..-+.+
T Consensus 82 ~~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~l~eq~e~~~~l~~~l~~l~~~g~~~~g~~~~d~~l~~ 160 (174)
T 2jd6_0 82 SPLKAFEAAYEHEKFISKSIYELAALAEEEKDYSTRAFLEWFINEQVEEEASVKKILDKLKFAKDSPQILFMLDKELSA 160 (174)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchhhhhHHHhh
Confidence 55667777777788877788889999999999999999999999999999999999988666543 3456777777754
No 27
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=90.33 E-value=0.35 Score=42.04 Aligned_cols=61 Identities=18% Similarity=0.038 Sum_probs=49.9
Q ss_pred CCcchhhhhhhhh-hhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQE-RATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 95 ~p~~~~vYtsfQE-~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
+...+|--..=.| ...-..|.+.++.|++.||...+.++..|+.+|..|+.-|+.+++.+-
T Consensus 103 st~enL~~a~~gE~~E~t~my~~~a~~A~eEgd~~~a~~f~~i~~~E~~H~~~~~~ll~~l~ 164 (202)
T 1yuz_A 103 SCDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAERYLAAYNDID 164 (202)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455666666666 444456888999999999999999999999999999999999987643
No 28
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=86.79 E-value=2.8 Score=36.27 Aligned_cols=86 Identities=20% Similarity=0.095 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCc----------hhHHHHHHHHHhhccCCccccC
Q 038880 112 ISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDP----------DDAILALAGMMKKTIKMPAHLM 181 (276)
Q Consensus 112 ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dP----------d~tm~Aia~~m~~~~~MP~~~m 181 (276)
.-|...|+.|+..|-+.++++...+|.+|..|+.-|.+++..+ +-+| ..+..-|...+.. -
T Consensus 45 ~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~l~~l-~~~~~i~~~p~~~~gst~enL~~a~~g-------E- 115 (202)
T 1yuz_A 45 AKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEM-EPGYEKPTVAAPSAYSCDLNLISGANG-------E- 115 (202)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-STTCCCCCC--CCCCCHHHHHHHHHHH-------H-
T ss_pred HHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceeccCCccCCCCHHHHHHHHHHh-------H-
Confidence 3477788999999999999999999999999999999998763 2221 1333333333321 0
Q ss_pred CCCCcchhhhhHHHHHHHhcCCChhh
Q 038880 182 YDGQNDKIFYHFSAVAQRLGVYTAKD 207 (276)
Q Consensus 182 ~dg~~~~lf~~~s~v~araGiY~~~d 207 (276)
.....+.|..++.++.+-|-+...+
T Consensus 116 -~~E~t~my~~~a~~A~eEgd~~~a~ 140 (202)
T 1yuz_A 116 -IYETSDMYPAFIRKAQEEGNSKAVH 140 (202)
T ss_dssp -HHHHHTHHHHHHHHHHHHTCHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 0111245777888888888776655
No 29
>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=85.72 E-value=2 Score=35.46 Aligned_cols=64 Identities=19% Similarity=0.109 Sum_probs=56.2
Q ss_pred CCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhc
Q 038880 94 NNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEI 157 (276)
Q Consensus 94 ~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~ 157 (276)
.++...|-...-+|+...-++.++.++|...|||.+..++..+-.|+..|+.-+..+++.+=.+
T Consensus 81 ~~~~e~l~~al~~E~~~~~~~~~l~~~a~~~~D~~~~~~l~~~l~Eq~e~~~~l~~~l~~l~~~ 144 (167)
T 1krq_A 81 KSLLDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLI 144 (167)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3677888888888998888899999999999999999999999999999999999998766433
No 30
>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1
Probab=84.93 E-value=6.7 Score=32.04 Aligned_cols=65 Identities=17% Similarity=0.078 Sum_probs=57.3
Q ss_pred CCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcC
Q 038880 94 NNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEID 158 (276)
Q Consensus 94 ~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~d 158 (276)
+++...|-...-+|+...-++.++.++|...|||.+..++..+-.|+..|......+++.+=.+-
T Consensus 81 ~~~~e~l~~al~~E~~~~~~~~~l~~~a~~~~D~~~~~fl~~~l~eq~e~~~~l~~~l~~l~~~g 145 (165)
T 1eum_A 81 SSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAG 145 (165)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 36778888888889888888999999999999999999999999999999999999988765544
No 31
>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A
Probab=84.56 E-value=6.6 Score=32.77 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=61.3
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhh
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDDAILALAGMMKK 172 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~ 172 (276)
++...|-...=.|+...-.++++.++|...||+....++..|..++..|..+++.+++.+=.+-.+ +-.+..-+.+
T Consensus 87 ~~~e~l~~~l~~E~~~~~~~~~l~~~A~~~~D~~t~~~l~~~l~eqe~~~~~l~~~l~~l~~~g~~--l~~~d~~l~~ 162 (189)
T 3oj5_A 87 RPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGAN--LFELENFVAR 162 (189)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch--HhHHHHHHHH
Confidence 455666666667777777788899999999999999999999999999999999999887665533 5666666654
No 32
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=84.07 E-value=1.4 Score=40.83 Aligned_cols=35 Identities=20% Similarity=0.148 Sum_probs=33.0
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD 160 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd 160 (276)
=|.++++...|.+||.+|..|...++..++.-+|+
T Consensus 197 m~G~~~~i~lI~RDE~~H~~f~~~l~~~l~~e~p~ 231 (323)
T 3ee4_A 197 LPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDA 231 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 68899999999999999999999999999998884
No 33
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=83.58 E-value=0.89 Score=42.29 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=32.8
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD 160 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd 160 (276)
=|.++++...|++||.+|..|...++..++.-+|+
T Consensus 213 m~g~~~~i~~I~RDE~~H~~f~~~l~~~~~~e~p~ 247 (346)
T 1syy_A 213 MIGIGEQYQYILRDETIHLNFGIDLINGIKEENPE 247 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCh
Confidence 68899999999999999999999999999987886
No 34
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=82.55 E-value=1.9 Score=40.03 Aligned_cols=35 Identities=23% Similarity=0.338 Sum_probs=32.7
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD 160 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd 160 (276)
=|.++++...|.+||.+|..|...++..++.-+|+
T Consensus 206 m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~e~~~ 240 (346)
T 2rcc_A 206 MVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPE 240 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCCh
Confidence 78999999999999999999999999999987774
No 35
>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A
Probab=80.81 E-value=11 Score=32.07 Aligned_cols=79 Identities=14% Similarity=0.198 Sum_probs=63.0
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhcc
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDDAILALAGMMKKTI 174 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~~~ 174 (276)
++...|-...-+|+-..-+..++.++|...+||.+..++..+-.+|..|...+.+++..+=.+-.+ ...+..-+.++.
T Consensus 87 s~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~fL~EQve~~~~l~~~l~~l~~~g~~--~~~l~~yL~~~~ 164 (189)
T 3uno_A 87 RPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGAN--LFELENFVAREV 164 (189)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--HHHHHHHHHHHh
Confidence 566777777778998888899999999999999999999999999999999999999877555332 224555554444
Q ss_pred C
Q 038880 175 K 175 (276)
Q Consensus 175 ~ 175 (276)
+
T Consensus 165 ~ 165 (189)
T 3uno_A 165 D 165 (189)
T ss_dssp C
T ss_pred c
Confidence 4
No 36
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=80.32 E-value=2.1 Score=33.35 Aligned_cols=36 Identities=22% Similarity=0.209 Sum_probs=30.2
Q ss_pred HhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchh
Q 038880 123 EHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDD 161 (276)
Q Consensus 123 ~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~ 161 (276)
.+.||.+.+|+..|+.+|+.|..-+.+++ ...||..
T Consensus 43 ~~~d~~~k~vl~~i~~EEkeH~g~~lelL---rr~Dp~~ 78 (95)
T 3k6c_A 43 ACKDKELKAILAHNRDEEKEHAAMLLEWI---RRCDPAF 78 (95)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHTCHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHhCHHH
Confidence 47799999999999999999988776665 5678754
No 37
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=80.07 E-value=1.3 Score=41.57 Aligned_cols=35 Identities=29% Similarity=0.257 Sum_probs=31.8
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHh--cCch
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFE--IDPD 160 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le--~dPd 160 (276)
=|.++++...|++||.+|..|...++..+.. .+|+
T Consensus 224 m~G~~~~i~lI~RDE~lH~~~~~~l~~~l~~~~e~p~ 260 (375)
T 1mxr_A 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPE 260 (375)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChh
Confidence 5789999999999999999999999999887 6774
No 38
>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A
Probab=79.87 E-value=13 Score=30.88 Aligned_cols=78 Identities=19% Similarity=0.158 Sum_probs=63.1
Q ss_pred CCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCc-hhHHHHHHHHHh
Q 038880 94 NNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDP-DDAILALAGMMK 171 (276)
Q Consensus 94 ~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dP-d~tm~Aia~~m~ 171 (276)
.++...|-..--+|+...-+..++.++|...+||.+..++..+-.|+..|......+++.+=.+.. ...+--|..-+.
T Consensus 83 ~~~~e~le~aL~~E~~v~~~~~~l~~~a~~~~D~~t~~fle~~l~eq~e~~~~l~~~l~~l~~~g~~~~g~~~~D~~l~ 161 (173)
T 1s3q_A 83 DSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLRLIGEDKRALLFLDKELS 161 (173)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHhHHhHHHh
Confidence 367788888888999999999999999999999999999999999999999999999877644432 234555555554
No 39
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=78.62 E-value=4.3 Score=31.57 Aligned_cols=49 Identities=18% Similarity=0.160 Sum_probs=37.1
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchh
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDD 161 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~ 161 (276)
|+-.--.|...|. .+.||.+.+|+.-||.+|+.|..-+.+.+.+. ||+.
T Consensus 30 EleAI~~Y~q~A~---~t~D~evk~vl~~iadEEkeH~g~~l~~Lrr~---dp~~ 78 (95)
T 1zpy_A 30 ELEAVDLYNQRVN---ACKDKELKAILAHNRDEEKEHAAMLLEWIRRC---DPAF 78 (95)
T ss_dssp HHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT---CHHH
T ss_pred HHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CHHH
Confidence 3333444664444 47799999999999999999999888777654 7775
No 40
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=75.93 E-value=2.5 Score=36.26 Aligned_cols=40 Identities=23% Similarity=0.324 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHH
Q 038880 114 HGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEK 153 (276)
Q Consensus 114 h~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~ 153 (276)
|-..|+.|++-|-|.++.+...||..|+.|..-|.+++..
T Consensus 44 Y~~fA~~A~~EG~~~IA~~F~~~A~~E~~HA~r~~kll~~ 83 (179)
T 3qhb_A 44 YPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSE 83 (179)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5566788889999999999999999999999999998865
No 41
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=74.61 E-value=0.62 Score=43.88 Aligned_cols=53 Identities=19% Similarity=0.138 Sum_probs=0.0
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHH
Q 038880 99 GFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 99 ~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~ 154 (276)
.+-..--.|.-..-+|...|+. +.||.+.+++..||.+|++|+.-|.+++..+
T Consensus 23 air~ai~~E~eAi~~Y~q~A~~---~~d~~~K~vl~~ia~EEk~H~~~f~~ll~~l 75 (345)
T 2e0z_A 23 ILRLAIIAELDAINLYEQMARY---SEDENVRKILLDVAREEKAHVGEFMALLLNL 75 (345)
T ss_dssp --------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455678888889966665 5599999999999999999999999888766
No 42
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=73.84 E-value=3 Score=38.26 Aligned_cols=34 Identities=21% Similarity=-0.017 Sum_probs=31.1
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD 160 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd 160 (276)
=|.++++...|.+||.+|..|...++..+.+ .|+
T Consensus 211 m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~-~~~ 244 (311)
T 2o1z_A 211 LHGLTFSNELISRDEGLHTDFNCLIYSLLEN-KLP 244 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-CCC
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 7899999999999999999999999998886 665
No 43
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=73.10 E-value=5.5 Score=36.20 Aligned_cols=70 Identities=13% Similarity=0.016 Sum_probs=46.7
Q ss_pred CCcchhhhhhhhhhhHH----HHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchhHHHHHH
Q 038880 95 NPYNGFIYTSFQERATF----ISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDDAILALA 167 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~----ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~tm~Aia 167 (276)
+|+..++...+=|---+ .+--++++. --=|.++++...|.+||.+|..|-..+...+++--|......+.
T Consensus 155 ~~~~~~va~~~lEGi~FysgF~~~~~l~~~---g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~~~~~e~~ 228 (296)
T 3mjo_A 155 DPLKKKVASTLLESFLFYSGFYLPMYLSSR---AKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYK 228 (296)
T ss_dssp CHHHHHHHHHHHHHTHHHHHTHHHHHHHHT---TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHH
Confidence 56666665555554322 222233331 11588999999999999999999888888888887765544433
No 44
>3bvf_A Ferritin; iron storage, metal-binding, oxidoreductase; 1.50A {Helicobacter pylori} PDB: 3bve_A 3bvi_A 3bvk_A 3bvl_A 3egm_A
Probab=72.92 E-value=23 Score=29.34 Aligned_cols=62 Identities=15% Similarity=0.083 Sum_probs=50.7
Q ss_pred CCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 94 NNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 94 ~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
.++...|-...-.|+...-++.++.++|...||+....++..|..|+..++.-+..++..+=
T Consensus 95 ~~~~e~le~aL~~E~~~~~~~~~l~~~A~~~~D~~t~~~l~~~l~eqvEe~~~l~~~l~~l~ 156 (181)
T 3bvf_A 95 EGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIE 156 (181)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36677888888888888888999999999999999999999999995555555777776553
No 45
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=71.42 E-value=6.2 Score=36.39 Aligned_cols=68 Identities=13% Similarity=0.044 Sum_probs=45.6
Q ss_pred CCcchhhhhhhhhhhH----HHHHHHHHHHHHHhC-CHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchhHHHHH
Q 038880 95 NPYNGFIYTSFQERAT----FISHGNTARLAKEHG-DMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDDAILAL 166 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT----~ish~ntar~a~~~g-DpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~tm~Ai 166 (276)
+|+..++...+=|--- +.+--++++ .| =|.++++...|.+||.+|..|-..+...++.--|......+
T Consensus 156 ~~~~~~va~~~lEGi~FysgF~~~~~l~~----~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~~~~~~~~~e~ 228 (329)
T 3dhz_A 156 DPLKKKVASTLLESFLFYSGFYLPMYLSS----RAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEY 228 (329)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHT----TTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHH
Confidence 5666665555555422 222223333 22 58899999999999999999988888888888776544333
No 46
>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...
Probab=70.99 E-value=26 Score=28.93 Aligned_cols=61 Identities=8% Similarity=0.034 Sum_probs=54.1
Q ss_pred CCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhH-hhchhhHHHHHHHHHHHHH
Q 038880 94 NNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGV-IASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 94 ~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~-IA~DE~rH~~fY~~iv~~~ 154 (276)
.++...|--.--+|+...-+..++.++|...+||.+..++.. +-.|+.-|......++..+
T Consensus 90 ~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~t~~fLe~~~l~eq~e~~~~l~~~l~~l 151 (174)
T 2v2p_A 90 GTTPDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNI 151 (174)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 366778888888899999999999999999999999999998 9999999999998888664
No 47
>2inc_A Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 2ind_A* 1t0q_A 1t0r_A 1t0s_A 3n1z_A* 3rnf_A* 3n20_A* 3rnc_A 3rn9_A* 3n1x_A 3rne_A 2rdb_A* 3n1y_A* 3rnb_A 3rng_A 3rna_A
Probab=70.45 E-value=5.2 Score=39.25 Aligned_cols=63 Identities=27% Similarity=0.229 Sum_probs=45.8
Q ss_pred CCcchhhhhhhh-hh-hHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhc
Q 038880 95 NPYNGFIYTSFQ-ER-ATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEI 157 (276)
Q Consensus 95 ~p~~~~vYtsfQ-E~-AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~ 157 (276)
+|.+.++.+.|= |- -|.+.-..+++.|...||+.+..+...|-.||.||..+=..+|..+++-
T Consensus 183 D~~E~~ialnlv~E~~~tnll~~~f~~~Aa~nGD~lt~~v~~siq~DEaRH~~~g~~ll~~ll~d 247 (491)
T 2inc_A 183 DSVAVSIMLTFAFETGFTNMQFLGLAADAAEAGDHTFASLISSIQTDESRHAQQGGPSLKILVEN 247 (491)
T ss_dssp CHHHHHHHCCCCCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 555554444333 21 2333332356666678999999999999999999999999999999876
No 48
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=70.43 E-value=4.1 Score=36.83 Aligned_cols=34 Identities=18% Similarity=0.014 Sum_probs=29.9
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCc
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFEIDP 159 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dP 159 (276)
=|.++++...|++||.+|..|...++..+++--+
T Consensus 188 m~g~~~~i~~I~RDE~~H~~~~~~l~~~l~~~~~ 221 (286)
T 3olj_A 188 MPGLTFSNELISRDEGLHCDFACLMFKHLVHKPS 221 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3889999999999999999999999998876433
No 49
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=70.16 E-value=7 Score=35.87 Aligned_cols=66 Identities=20% Similarity=0.077 Sum_probs=44.4
Q ss_pred CCcchhhhhhhhhhh----HHHHHHHHHHHHHHhC-CHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchhHHH
Q 038880 95 NPYNGFIYTSFQERA----TFISHGNTARLAKEHG-DMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDDAIL 164 (276)
Q Consensus 95 ~p~~~~vYtsfQE~A----T~ish~ntar~a~~~g-DpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~tm~ 164 (276)
+|+..++...+=|-- .+.+--++++ .| =|.++++...|.+||.+|..|-..+...+++--|..-..
T Consensus 146 ~~~~~~va~~~lEgi~Fys~F~~~~~l~~----~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~~~~~~~~~~~~ 216 (319)
T 3n37_A 146 DPLKKKIASVFLESFLFYSGFWLPMYFSS----RGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQRE 216 (319)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHH----TTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCchhHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhHHhHH
Confidence 456655554444542 2222223433 23 588999999999999999999888888888887765433
No 50
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7
Probab=68.85 E-value=5.7 Score=34.93 Aligned_cols=67 Identities=18% Similarity=0.180 Sum_probs=52.3
Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhc-CchhHHHHHH
Q 038880 97 YNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEI-DPDDAILALA 167 (276)
Q Consensus 97 ~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~-dPd~tm~Aia 167 (276)
++.++..++=| .=||.+.+.+|....|+ |++....+..-|+||+.-|-.+-..+++. +=++-+..+.
T Consensus 113 ~D~Llv~AlIE---ARSCERF~lLa~~l~d~-L~~FY~~Ll~SEArHy~~yl~LA~~y~~~~~v~~R~~~l~ 180 (206)
T 2itb_A 113 VDTLVVGAFIE---ARSCERFAALVPHLDEE-LGRFYHGLLKSEARHYQGYLKLAHNYGDEADIARCVELVR 180 (206)
T ss_dssp HHHHHHHHHHH---HHHHHHHHHHGGGSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HHhHHHHHHHHhcCcHH-HHHHHHHHHHHHhhHHHHHHHHHHHHcCcchHHHHHHHHH
Confidence 34566666666 46899999999888778 99999999999999999999999998865 3344343333
No 51
>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A
Probab=68.37 E-value=30 Score=28.49 Aligned_cols=61 Identities=8% Similarity=0.015 Sum_probs=54.6
Q ss_pred CCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHh-HhhchhhHHHHHHHHHHHHH
Q 038880 94 NNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICG-VIASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 94 ~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~-~IA~DE~rH~~fY~~iv~~~ 154 (276)
.++...|--.--+|+...-++.++.++|...+||.+..++. .+-.|+.-|+.....++..+
T Consensus 91 ~~~~e~le~aL~~E~~v~~~l~~l~~~a~~~~D~~t~~fLe~~~l~eq~e~~~~l~~~l~~l 152 (173)
T 1rcd_A 91 ANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTDFLESPYLSESVETIKKLGDHITSL 152 (173)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36777888888899999999999999999999999999999 99999999999988888654
No 52
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=68.36 E-value=4.9 Score=36.57 Aligned_cols=48 Identities=17% Similarity=0.266 Sum_probs=39.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHH
Q 038880 104 SFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 104 sfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~ 154 (276)
..=|...+.-|.|+-++ +.||....+|..|-.||..|..-|.+.++.+
T Consensus 145 iaaE~~Ar~~Y~rl~~~---tdDp~vkd~L~fLi~RE~~H~~~f~~aLe~l 192 (266)
T 1o9i_A 145 VVRESEARLQVSRLYSM---TEDEGVRDMLKFLLARETQHQLQFMKAQEEL 192 (266)
T ss_dssp HHHHHHHHHHHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh---cCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33466667777866665 5599999999999999999999999988876
No 53
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=68.24 E-value=4.9 Score=37.13 Aligned_cols=35 Identities=17% Similarity=0.103 Sum_probs=31.1
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHh--cCch
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFE--IDPD 160 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le--~dPd 160 (276)
=|.++++...|++||.+|..|-..++..+++ -.|+
T Consensus 196 m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~p~ 232 (324)
T 4a58_A 196 MPGICLANNYISRDELLHTRAASLLYNSMTAKADRPR 232 (324)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Confidence 5889999999999999999999999999886 4554
No 54
>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1
Probab=68.11 E-value=29 Score=26.89 Aligned_cols=57 Identities=7% Similarity=0.008 Sum_probs=46.9
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
++...|-...=.|...--++++..++|...||+....+|..|-.++..|.-+....+
T Consensus 85 ~~~e~l~~~l~~e~~~~~~~~~~~~~a~~~~D~~t~~~l~~~l~e~ek~~w~l~~~l 141 (142)
T 1ji5_A 85 TAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTSDLLLGIYTELEKHAWMLRAFL 141 (142)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445566666667777777888899999888999999999999999999998877654
No 55
>3ge3_A Toluene-4-monooxygenase system protein A; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} SCOP: a.25.1.2 PDB: 3ge8_A 3dhi_A* 3dhh_A* 3dhg_A* 3i5j_A 3i63_A 3q14_A 3q2a_A* 3q3m_A* 3q3n_A* 3q3o_A* 3rmk_A* 3ri7_A
Probab=67.95 E-value=8.1 Score=38.08 Aligned_cols=103 Identities=20% Similarity=0.192 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhc-Cchh--------------HHHHHHHHHhhcc
Q 038880 110 TFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEI-DPDD--------------AILALAGMMKKTI 174 (276)
Q Consensus 110 T~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~-dPd~--------------tm~Aia~~m~~~~ 174 (276)
|.+.-..++..|...||.++..|+..|-+||.||+.-=..+|.-+++- +|+. ++.++..+|-. +
T Consensus 201 tnll~v~l~~~Aa~NGD~~tptl~~S~qsDe~Rh~~~g~alv~~lle~~~~~n~q~wld~wfwra~~a~~al~G~~~d-Y 279 (500)
T 3ge3_A 201 ANMQFLGLAADAAEAGDYTFANLISSIQTDESRHAQQGGPALQLLIENGKREEAQKKVDMAIWRAWRLFAVLTGPVMD-Y 279 (500)
T ss_dssp HHHHHTHHHHHHHHTTCHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred hHHHHHHHHHHHHHcCChhhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence 444444566777789999999999999999999999999999999987 7754 33344433321 2
Q ss_pred CCcc-ccCCCCCc---chhhhhHHHHHHHhcCCChhhHHHHHH
Q 038880 175 KMPA-HLMYDGQN---DKIFYHFSAVAQRLGVYTAKDYADILA 213 (276)
Q Consensus 175 ~MP~-~~m~dg~~---~~lf~~~s~v~araGiY~~~dy~~Vl~ 213 (276)
--|- +----+.+ ....++|...+.+.||=-|....+.++
T Consensus 280 ~~p~~~r~~S~~e~~~ewi~~~~~~~L~~~Gl~~P~~~~~~~~ 322 (500)
T 3ge3_A 280 YTPLEDRSQSFKEFMYEWIIGQFERSLIDLGLDKPWYWDLFLK 322 (500)
T ss_dssp TSCGGGCSSCHHHHHHHHTTTTHHHHHHHTTCCCCTTHHHHHH
T ss_pred cCccccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 1120 00001100 123455788899999988887666553
No 56
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A 1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A 1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Probab=67.91 E-value=7.2 Score=38.54 Aligned_cols=65 Identities=20% Similarity=0.114 Sum_probs=48.7
Q ss_pred CCcchhhhhhhh-h-hhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch
Q 038880 95 NPYNGFIYTSFQ-E-RATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD 160 (276)
Q Consensus 95 ~p~~~~vYtsfQ-E-~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd 160 (276)
++.+.++.+.|= | .-|.+.-..+.+.|...||..+..+...|..||.||..-=..+|..+++ ||+
T Consensus 182 D~~E~~valn~v~E~~~tnll~~~~~~~Aa~nGD~~tptv~~siqsDEaRH~~~g~~ll~~Lle-d~~ 248 (512)
T 1mty_D 182 DAVECSLNLQLVGEACFTNPLIVAVTEWAAANGDEITPTVFLSIETDELRHMANGYQTVVSIAN-DPA 248 (512)
T ss_dssp CHHHHHHHHTTTHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SHH
T ss_pred ChHHHhhhhhhhHHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-Ccc
Confidence 455555544433 2 2244444456777778999999999999999999999999999999998 564
No 57
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=67.27 E-value=4 Score=38.09 Aligned_cols=31 Identities=23% Similarity=0.008 Sum_probs=28.9
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHh
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFE 156 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le 156 (276)
=|.++++...|.+||.+|..|...++..+.+
T Consensus 212 m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~ 242 (349)
T 2p1i_A 212 LHGLTFSNELISRDEGLHTDFNCLIYSLLEN 242 (349)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6789999999999999999999999998776
No 58
>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=66.74 E-value=8.5 Score=35.90 Aligned_cols=41 Identities=17% Similarity=0.285 Sum_probs=34.2
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchhHHHHH
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDDAILAL 166 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~tm~Ai 166 (276)
=|.++++...|.+||.+|..|-..+...++..-|..-...+
T Consensus 205 m~G~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~e~~~e~ 245 (350)
T 4dr0_A 205 LMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAEL 245 (350)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 58899999999999999999988888888887777654433
No 59
>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*
Probab=66.48 E-value=18 Score=29.71 Aligned_cols=63 Identities=17% Similarity=0.063 Sum_probs=52.7
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhc
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEI 157 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~ 157 (276)
++...|-...-.|+...-++++..++|...||+....++..+-.++..++.....++..+=.+
T Consensus 96 ~~~e~le~~l~~E~~v~~~~~~l~~~A~~~~D~~t~~~l~~~l~eq~ee~~~l~~~l~~l~~~ 158 (176)
T 1vlg_A 96 GIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVSFLKWFVDEQVEEEDQVREILDLLEKA 158 (176)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 566777777778888888899999999999999999999999999777777888887766444
No 60
>1mty_B Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1xvb_C 1fyz_C 1fz0_C 1fz2_C 1fz3_C 1fz4_C 1fz5_C 1fz6_C 1fz7_C 1fz8_C 1fz9_C 1fzh_C 1fzi_C 1xu3_C 1xu5_C 1fz1_C 1xvc_C 1xvd_C 1xve_C 1xvf_C ...
Probab=65.90 E-value=21 Score=33.94 Aligned_cols=52 Identities=13% Similarity=0.050 Sum_probs=44.5
Q ss_pred hHHHHHHH-HHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch
Q 038880 109 ATFISHGN-TARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD 160 (276)
Q Consensus 109 AT~ish~n-tar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd 160 (276)
-|.+.... .+++|...||.+...|+..+-.||.||+.-=..+|+-++|.||+
T Consensus 251 ~~~L~~~~~~~~~Aa~nGD~~tp~l~~s~q~D~~Rh~~w~~alvk~lle~d~~ 303 (384)
T 1mty_B 251 FGQFVRREFFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYNCLGDDPE 303 (384)
T ss_dssp HHHHHHHTTHHHHGGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTCTT
T ss_pred hHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 34555555 47788889999999999999999999999999999999988983
No 61
>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}
Probab=65.84 E-value=36 Score=28.28 Aligned_cols=58 Identities=16% Similarity=0.039 Sum_probs=48.0
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVE 152 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~ 152 (276)
++-..|-...=.|...--+++...++|...||+....+|..|-.||..|.-+....+.
T Consensus 113 ~~~e~l~~~l~~e~~~i~~~~~~i~~a~~~~D~~T~~lL~~~l~eeEkh~w~L~~~L~ 170 (192)
T 2vxx_A 113 NCRQMLSNDLQAEQAIIGVLRQQATQAESLGDRATAYLYDQILLKTEERAYHIGHFLA 170 (192)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4445666666677777778888999999999999999999999999999988877664
No 62
>3u52_A Phenol hydroxylase component PHN; 4-helix bundle, dioxygen, hydrocarbons, oxidore; HET: MPO EPE; 1.95A {Pseudomonas stutzeri} PDB: 2inn_A 2inp_A
Probab=65.61 E-value=11 Score=37.24 Aligned_cols=94 Identities=17% Similarity=0.153 Sum_probs=62.0
Q ss_pred HHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchh--------------HHHHHHHHHhh--ccCCccc
Q 038880 116 NTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDD--------------AILALAGMMKK--TIKMPAH 179 (276)
Q Consensus 116 ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~--------------tm~Aia~~m~~--~~~MP~~ 179 (276)
.+.+.|...||..+..+...+-.||.||..-=..+|+.+++-||+. +..|++ .+.- -+-.| +
T Consensus 209 ~~~~~Aa~nGD~~t~t~~~s~qsDesRh~~w~~alvk~~l~~dp~Nr~llq~wl~~w~wra~~Al~-~lg~~~dY~~p-~ 286 (511)
T 3u52_A 209 PFMSGAAYNGDMATVTFGFSAQSDEARHMTLGLEVIKFILEQHEDNVPIVQRWIDKWFWRGFRLLS-LVSMMMDYMLP-N 286 (511)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTCS-S
T ss_pred HHHHHHHHCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH-HHHHHHhccCc-c
Confidence 3334555689999999999999999999999999999999888874 222331 2210 12234 2
Q ss_pred cCCCCCcchhh----hh----HHHHHHHhcCCChhhHHHHHH
Q 038880 180 LMYDGQNDKIF----YH----FSAVAQRLGVYTAKDYADILA 213 (276)
Q Consensus 180 ~m~dg~~~~lf----~~----~s~v~araGiY~~~dy~~Vl~ 213 (276)
-..-+. +.+ ++ +...+.+.||=-|....+.++
T Consensus 287 r~~s~~--e~~~~~~e~~~~~~~~~L~~~Gl~~P~~~~~~~~ 326 (511)
T 3u52_A 287 KVMSWS--EAWEVYYEQNGGALFKDLERYGIRPPKYQDVAND 326 (511)
T ss_dssp CCCCHH--HHHHHHTHHHHHHHHHHHGGGTCCCCTTHHHHHH
T ss_pred ccccHH--HHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHH
Confidence 111121 223 22 566788889888887766653
No 63
>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A
Probab=64.88 E-value=32 Score=29.59 Aligned_cols=74 Identities=15% Similarity=0.157 Sum_probs=57.1
Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHh-HhhchhhHHHHHHHHHHHHHHhcCchhHHHHHHHHH
Q 038880 97 YNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICG-VIASDEKRHELAYTKIVEKLFEIDPDDAILALAGMM 170 (276)
Q Consensus 97 ~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~-~IA~DE~rH~~fY~~iv~~~le~dPd~tm~Aia~~m 170 (276)
...|--.--+|+...-+..++.++|...+|+.+..++. .+-.|+.-|+.....++..+=.+-...++--|..-+
T Consensus 130 ~e~le~aL~~Ek~v~~~l~~l~~~A~~~~D~~t~~fLe~~fL~EQve~~~~l~~~l~~l~~~g~~~gl~l~D~~l 204 (212)
T 3a68_A 130 LHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQML 204 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCeehHHhHHH
Confidence 56677777788888888999999999999999999998 999999999999888887654433222343444433
No 64
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=64.87 E-value=5.9 Score=37.64 Aligned_cols=31 Identities=19% Similarity=0.041 Sum_probs=28.6
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHh
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFE 156 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le 156 (276)
=|.++++...|.+||.+|..|...++..+.+
T Consensus 253 MpG~~~~i~lI~RDE~lH~~f~~~l~~~l~~ 283 (390)
T 1h0o_A 253 MPGLTFSNELISRDEGLHCDFACLMFKHLVH 283 (390)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 6899999999999999999999999997665
No 65
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=64.49 E-value=6.2 Score=36.70 Aligned_cols=32 Identities=16% Similarity=-0.103 Sum_probs=29.1
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHhc
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFEI 157 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le~ 157 (276)
=|.++++...|++||.+|..|...++..+.+-
T Consensus 206 m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~ 237 (345)
T 1jk0_B 206 MPGLAMANRNICRDRGAYTDFSCLLFAHLRTK 237 (345)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 57899999999999999999999999987764
No 66
>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A
Probab=64.24 E-value=42 Score=27.98 Aligned_cols=62 Identities=15% Similarity=0.081 Sum_probs=54.2
Q ss_pred CCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHh-HhhchhhHHHHHHHHHHHHHH
Q 038880 94 NNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICG-VIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 94 ~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~-~IA~DE~rH~~fY~~iv~~~l 155 (276)
.++...|-..--+|+...-+..++.++|...+|+.+..++. .+-.++.-|......++..+=
T Consensus 95 ~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~t~~fLe~~fl~eq~e~~~~l~~~l~~l~ 157 (183)
T 2cih_A 95 ESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLR 157 (183)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677788888889998889999999999999999999999 699999999999998887653
No 67
>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1
Probab=64.14 E-value=50 Score=27.56 Aligned_cols=64 Identities=16% Similarity=0.077 Sum_probs=55.2
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcC
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEID 158 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~d 158 (276)
++...|-..--+|+...-+..++.++|...+||.+..++..+-.++..|......++..+=.+-
T Consensus 91 ~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~fl~EQve~~~~l~~~l~~l~~~g 154 (184)
T 3qz3_A 91 SLGEVFRETYQHEQKITQQINKLAHVAFTSQDYSTFNFLQWYVAEQHEEEKLFKGILDKLELVG 154 (184)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5667777777778888888999999999999999999999999999999999999987754444
No 68
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=63.77 E-value=21 Score=32.79 Aligned_cols=47 Identities=19% Similarity=0.207 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchh
Q 038880 115 GNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDD 161 (276)
Q Consensus 115 ~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~ 161 (276)
.|++.+......|-+...++..+.-|+.|..+|+.+++.+.-.||.+
T Consensus 88 ~nl~~l~~~i~~pE~~~~l~~q~~~E~iHs~sYs~il~tl~~~d~~e 134 (324)
T 4a58_A 88 FNIDELVTSFESHDIDHYYTEQKAMENVHGETYANILNMLFDGDRAA 134 (324)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred hhHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 45666666677899999999999999999999999999988777765
No 69
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=63.27 E-value=6.8 Score=36.25 Aligned_cols=50 Identities=20% Similarity=0.175 Sum_probs=40.6
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 103 TSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 103 tsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
-..=|...+.-|.++-++ +.||....+|..|-.||..|..-|.+.++.+=
T Consensus 151 NiaAE~~Ar~~Y~rL~~~---tdDp~vkd~L~fLi~RE~~H~~~f~~ALe~l~ 200 (302)
T 2v8t_A 151 NFFLEVAARTHKLRVYEM---TDNPVAREMIGYLLVRGGVHAAAYGKALESLT 200 (302)
T ss_dssp HHHHHHHHHHHHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh---cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334466667777766665 56999999999999999999999999998863
No 70
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=63.06 E-value=16 Score=30.58 Aligned_cols=82 Identities=16% Similarity=0.030 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhccCCccccCCCCCcchhhh
Q 038880 112 ISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDDAILALAGMMKKTIKMPAHLMYDGQNDKIFY 191 (276)
Q Consensus 112 ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~~~~MP~~~m~dg~~~~lf~ 191 (276)
.-|---|+.|+.-|=|.++++...+|.+|..|..-+-+.+.. -..|..-+...+.. . .+.-.+.|-
T Consensus 23 ~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~-----i~~t~enL~~a~~g-------E--~~e~~~mY~ 88 (170)
T 3pwf_A 23 MRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGK-----LGKTPENLQMGIEG-------E--TFEVEEMYP 88 (170)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCHHHHHHHHHHH-------H--HHHHHTHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCChHHHHHHHHHh-------H--HHHHHHHHH
Confidence 334455677888999999999999999999998755554322 23344444444431 0 001124567
Q ss_pred hHHHHHHHhcCCChhh
Q 038880 192 HFSAVAQRLGVYTAKD 207 (276)
Q Consensus 192 ~~s~v~araGiY~~~d 207 (276)
.++.++.+-|-+...+
T Consensus 89 ~~a~~A~eeg~~~~a~ 104 (170)
T 3pwf_A 89 VYNKAAEFQGEKEAVR 104 (170)
T ss_dssp HHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHCCCHHHHH
Confidence 7888888888877766
No 71
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=62.88 E-value=12 Score=34.96 Aligned_cols=45 Identities=18% Similarity=0.158 Sum_probs=35.4
Q ss_pred HHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchhHHHHHHHHHh
Q 038880 127 MKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDDAILALAGMMK 171 (276)
Q Consensus 127 pvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~ 171 (276)
|...++...=..||+||..|+++++...+..-+...-..++..+.
T Consensus 214 P~vR~v~riHv~DEaRH~~fare~~~~~~~~l~~~~R~~~~~~l~ 258 (336)
T 3chh_A 214 PMHSLITTLHLRDETAHGSIVVEVVRELYARMNEQQRRALVRCLP 258 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 555666666688999999999999999998887765666666664
No 72
>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein complex, ferritin-like fold, bacterial multi monooxygenase, structural genomics; HET: 3HC; 2.03A {Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C* 3pwq_C
Probab=61.13 E-value=51 Score=30.37 Aligned_cols=115 Identities=13% Similarity=0.002 Sum_probs=76.2
Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch---hHHHHHHHHHhhc
Q 038880 97 YNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD---DAILALAGMMKKT 173 (276)
Q Consensus 97 ~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd---~tm~Aia~~m~~~ 173 (276)
..+++...|-..+-.+.+. .++. +.++.|+.++.+|-+.|.-|..|=.+.|.++-+-+|. .+-.||.....-.
T Consensus 118 ad~vvr~~l~D~~a~~~~~---~L~~-ss~~plA~~a~ki~kEE~yH~~~g~~wv~rL~~gt~esr~r~Q~Al~~~wp~~ 193 (311)
T 3pvt_A 118 ADIGVIGWLVDGAAIVNQV---ALCR-TSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQKQMLQDAINRFWWPA 193 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHH---TTTT-CSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 4566666666777666655 4432 6699999999999999999999999999999987665 3345555555322
Q ss_pred cCCccccCCCCCcchhhhhHHHHHHHhcCCC--h---hh-HHHHHHHHHhccccc
Q 038880 174 IKMPAHLMYDGQNDKIFYHFSAVAQRLGVYT--A---KD-YADILAFLIERWEVE 222 (276)
Q Consensus 174 ~~MP~~~m~dg~~~~lf~~~s~v~araGiY~--~---~d-y~~Vl~~ll~~W~v~ 222 (276)
..|=|. +|. + ...+..+.+.||=. + ++ +.+.+.++++..++.
T Consensus 194 ~elFg~--~~~-~----s~~~~~~~~~Gi~~~~n~eLR~~w~~~v~~~l~~~gL~ 241 (311)
T 3pvt_A 194 LMMFGP--NDD-N----SPNSARSLTWKIKRFTNDELRQRFVDNTVPQVEMLGMT 241 (311)
T ss_dssp HHTTCS--CGG-G----CTTHHHHHHTTSCSSCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHcCC--Ccc-c----cchHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 222111 111 1 12366677778774 3 23 567888888887775
No 73
>2inc_B Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 3n20_B* 1t0r_B 1t0s_B 1t0q_B* 3n1x_B 3n1y_B* 3n1z_B* 2rdb_B* 3rn9_B* 3rna_B 3rnb_B 3rnc_B 3rne_B 3rnf_B* 3rng_B 2ind_B*
Probab=60.24 E-value=19 Score=33.21 Aligned_cols=63 Identities=17% Similarity=0.161 Sum_probs=49.7
Q ss_pred CCcchhhhhhh--hhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhc
Q 038880 95 NPYNGFIYTSF--QERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEI 157 (276)
Q Consensus 95 ~p~~~~vYtsf--QE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~ 157 (276)
||.+.++...| -=.-|.+....+.+.|...||..+..|..-+-.||.||+.-=..+|+-+++-
T Consensus 207 Dw~E~~va~nlv~e~l~~~l~~~~~~~~Aa~nGD~~t~~l~~s~q~D~~Rh~~~~~alvk~~~~~ 271 (322)
T 2inc_B 207 DWGEAFTAINLVTKPAVEEALLQQLGSLAQSEGDTLLGLLAQAQKRDAERHRRWSSALVKMALEK 271 (322)
T ss_dssp SHHHHHHHHHTTHHHHHHHHHTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 55555554433 3345666666777888889999999999999999999999999999888876
No 74
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=59.80 E-value=19 Score=28.54 Aligned_cols=48 Identities=21% Similarity=0.166 Sum_probs=39.2
Q ss_pred hhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHH
Q 038880 106 QERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEK 153 (276)
Q Consensus 106 QE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~ 153 (276)
-|......|--.|+.++..|-|.++.++..+|.+|..|..-+-+.+..
T Consensus 19 ~E~~A~~~Y~~~A~~a~~~g~~~~a~~f~~~A~eE~~HA~~~~~~l~~ 66 (144)
T 1j30_A 19 GESMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQ 66 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 355556667777888888999999999999999999999877666654
No 75
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=59.44 E-value=3.4 Score=33.26 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=36.8
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVE 152 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~ 152 (276)
|...-.+|..++.+|- +..-.+++--|+.||.+|...|+++..
T Consensus 44 E~~AI~~Y~qLA~~AP---~ee~k~iI~eIr~DE~rH~~~F~~lY~ 86 (115)
T 2hz8_A 44 EKQAVKVYKEAAEKAR---NPEKRQVIDKILEDEEKHIEWLKAASK 86 (115)
T ss_dssp HHHHHHHHHHHHHSCC---CTTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888998887654 677778888999999999999999987
No 76
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=59.07 E-value=8.6 Score=36.95 Aligned_cols=34 Identities=24% Similarity=0.148 Sum_probs=29.8
Q ss_pred CHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch
Q 038880 126 DMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD 160 (276)
Q Consensus 126 DpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd 160 (276)
=|.++++...|.+||.+|..|...++..+.+ .|+
T Consensus 279 MpG~~~~i~lI~RDE~lH~~f~~~l~~~l~~-~~~ 312 (419)
T 1jk0_A 279 MPGLTFSNELICRDEGLHTDFACLLFAHLKN-KPD 312 (419)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-CCC
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCC
Confidence 7899999999999999999999999987554 554
No 77
>3sxm_A Transcriptional regulator, GNTR family; transcription factor, metal-binding, structur genomics, PSI-2, protein structure initiative; 1.55A {Thermotoga maritima} PDB: 3sxk_A 3sxz_A
Probab=56.47 E-value=53 Score=24.79 Aligned_cols=61 Identities=16% Similarity=0.111 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHhHhhc-------h---hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHh
Q 038880 108 RATFISHGNTARLAKEHGDMKLAQICGVIAS-------D---EKRHELAYTKIVEKLFEIDPDDAILALAGMMK 171 (276)
Q Consensus 108 ~AT~ish~ntar~a~~~gDpvLa~il~~IA~-------D---E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~ 171 (276)
.+-.-||.-+.+ .+|+|.|.+++..+-. + -..-..-.+.|++++..-||+.+..++...+.
T Consensus 57 ~~d~~FH~~i~~---~s~N~~l~~~~~~l~~~~~~~~~~~~~~~~~~~eH~~I~~Ai~~~D~~~A~~~~~~Hl~ 127 (140)
T 3sxm_A 57 DSDERLHKLFIR---ASGNELIISLYEKIWDRIDLVRHLNERYVVSNREHKELIERIISGDKEGAIEKLKEHLK 127 (140)
T ss_dssp HHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHcCccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 356778995554 6889999988877642 1 11222447789999999999999888877764
No 78
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=55.77 E-value=20 Score=32.99 Aligned_cols=39 Identities=26% Similarity=0.363 Sum_probs=32.8
Q ss_pred HHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 117 TARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 117 tar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
+.++.....+|-....++..+..|+.|..+|+.+++.+.
T Consensus 96 l~~l~~~~~~~e~~~~~~~q~~~E~iHs~sYs~il~tl~ 134 (346)
T 2rcc_A 96 SMRAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLV 134 (346)
T ss_dssp HHHHHTTBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344444566899999999999999999999999998883
No 79
>3ge3_B Toluene-4-monooxygenase system protein E; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} PDB: 3ge8_B 3i5j_B 3i63_B 3dhi_B* 3dhh_B* 3dhg_B* 3q14_B 3q2a_B* 3q3m_B* 3q3n_B* 3q3o_B* 3rmk_B* 3ri7_B
Probab=55.09 E-value=21 Score=33.12 Aligned_cols=65 Identities=18% Similarity=0.131 Sum_probs=51.6
Q ss_pred CCcchhhhh--hhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch
Q 038880 95 NPYNGFIYT--SFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD 160 (276)
Q Consensus 95 ~p~~~~vYt--sfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd 160 (276)
||.+.++-. +|-=.-|.+....+.+.|...||..+..+..-+-.||.||+.-=..+|+-+++- |+
T Consensus 211 Dw~E~~vA~nlv~E~l~~~L~~~~~~~~Aa~nGD~~t~~l~~s~qsD~~Rh~~~~~alvk~ll~~-~~ 277 (327)
T 3ge3_B 211 DWGEAFVSLNLVVKPMIVESIFKPLQQQAWENNDTLLPLLIDSQLKDAERHSRWSKALVKHALEN-PD 277 (327)
T ss_dssp SHHHHHHHHHHTHHHHHHHHTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-TH
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-hH
Confidence 555555433 333356777777788888889999999999999999999999999999888887 44
No 80
>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A
Probab=54.89 E-value=77 Score=26.12 Aligned_cols=65 Identities=12% Similarity=0.111 Sum_probs=55.9
Q ss_pred CCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhH-hhchhhHHHHHHHHHHHHHHhcC
Q 038880 94 NNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGV-IASDEKRHELAYTKIVEKLFEID 158 (276)
Q Consensus 94 ~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~-IA~DE~rH~~fY~~iv~~~le~d 158 (276)
.+|...|-..-=+|+...-+..++.++|...+||.+..++.. +=.++..|..-...++..+=.+.
T Consensus 91 ~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~~fl~eQve~~~~l~~~l~~l~~~g 156 (176)
T 3ka8_A 91 GNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVKHIKRIGDFITNLKRLG 156 (176)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 366778888878899888889999999999999999999995 99999999999999887765554
No 81
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=54.08 E-value=29 Score=31.81 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=28.2
Q ss_pred CCHHHHHHHhHhhchhhHHHHHHHHHHHHH
Q 038880 125 GDMKLAQICGVIASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 125 gDpvLa~il~~IA~DE~rH~~fY~~iv~~~ 154 (276)
+.|-....++..+.+|+.|..+|+.+++.+
T Consensus 95 ~~pE~~~~l~~q~~~EaiHs~sYs~il~tl 124 (323)
T 3ee4_A 95 GRLADEMYLTQFAFEEAKHTQVFRMWLDAV 124 (323)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 569999999999999999999999999887
No 82
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=52.76 E-value=20 Score=33.03 Aligned_cols=41 Identities=22% Similarity=0.156 Sum_probs=34.4
Q ss_pred HHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchh
Q 038880 120 LAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDD 161 (276)
Q Consensus 120 ~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~ 161 (276)
+......|-+...++..+..|+.|..+|+.+++.+. .+|++
T Consensus 100 l~~~v~~~E~~~~l~~q~~~EaiHs~sYs~il~tl~-~~~~e 140 (346)
T 1syy_A 100 IFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLG-LDEKE 140 (346)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CCHHH
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHH
Confidence 334456999999999999999999999999998874 57754
No 83
>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa}
Probab=52.00 E-value=32 Score=29.46 Aligned_cols=61 Identities=15% Similarity=0.123 Sum_probs=51.0
Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHh-HhhchhhHHHHHHHHHHHHHHhc
Q 038880 97 YNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICG-VIASDEKRHELAYTKIVEKLFEI 157 (276)
Q Consensus 97 ~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~-~IA~DE~rH~~fY~~iv~~~le~ 157 (276)
...|-..-=+|+.-.-+..++.++|...+||.+..++. .+-.++..|..-...++..+=.+
T Consensus 125 ~e~le~aL~~Ek~v~~~l~~l~~lA~~~~D~~t~~fLe~~fL~EQve~i~~l~~~l~~l~~~ 186 (204)
T 3vnx_A 125 LYAMELALSLEKLNFQKLQALQAIADKHKDAALCDFVEGGLLSEQVDAVKEHAVYVSQLRRV 186 (204)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45666666678888888899999999999999999999 79999999999998888765333
No 84
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=51.80 E-value=31 Score=28.00 Aligned_cols=41 Identities=20% Similarity=0.094 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHH
Q 038880 112 ISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVE 152 (276)
Q Consensus 112 ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~ 152 (276)
.-|---|+.|+.-|=|.++++...+|.+|..|..-+-+++.
T Consensus 29 ~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~ 69 (144)
T 4di0_A 29 RRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLE 69 (144)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33555567777899999999999999999999986666654
No 85
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=51.03 E-value=36 Score=26.57 Aligned_cols=56 Identities=14% Similarity=0.036 Sum_probs=45.0
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKI 150 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~i 150 (276)
++...|--..=.|...--.+++...+|.+.||+....++..|-.++..|.-|.+..
T Consensus 89 ~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll~~~l~e~ek~~w~l~~~ 144 (146)
T 1jig_A 89 SAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADMLLAIHTTLEQHVWMLSAF 144 (146)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455555555677777778888999988899999999999999999998887654
No 86
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=50.95 E-value=44 Score=26.22 Aligned_cols=57 Identities=11% Similarity=-0.016 Sum_probs=45.2
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
++-..|--..=.|...--.+++...+|.+.||+....++..|-.++..|.-|.+..+
T Consensus 92 ~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll~~~l~e~ek~~w~l~~~l 148 (149)
T 1n1q_A 92 SAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADMLDAIEAGLEKHVWMLEAFL 148 (149)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344455555556666667788889999888999999999999999999998887654
No 87
>2nl9_A Fusion protein consisting of induced myeloid LEUK differentiation protein MCL-1 homolog...; apoptosis, MCL-1, BIM; HET: MSE; 1.55A {Rattus norvegicus} PDB: 2nla_A 3d7v_A 3io9_A 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 1wsx_A 2jm6_B 2roc_A 2rod_A 2kbw_A 3mk8_B
Probab=49.84 E-value=12 Score=30.69 Aligned_cols=42 Identities=19% Similarity=0.421 Sum_probs=32.5
Q ss_pred HHHHhHhhch-hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhh
Q 038880 130 AQICGVIASD-EKRHELAYTKIVEKLFEIDPDDAILALAGMMKK 172 (276)
Q Consensus 130 a~il~~IA~D-E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~ 172 (276)
...|.+|+.+ |.+|..+|++++.. |.++|+.++..|..|+.+
T Consensus 40 ~~~Lr~i~dele~~~~~~f~~~~~~-l~i~~~~~~~~f~~Va~e 82 (157)
T 2nl9_A 40 LETLRRVGDGVQRNHETAFQGMLRK-LDIKNEDDVKSLSRVMIH 82 (157)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH-HCCCSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCchHHHHHHHHHHH
Confidence 3444444443 78999999999977 588999888889888875
No 88
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=47.84 E-value=37 Score=27.43 Aligned_cols=48 Identities=21% Similarity=0.145 Sum_probs=39.2
Q ss_pred hhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHH
Q 038880 106 QERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEK 153 (276)
Q Consensus 106 QE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~ 153 (276)
-|......|.+.+..++..|-|.++.++..+|.+|..|..-+.+.+..
T Consensus 22 ~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~ 69 (179)
T 1nfv_A 22 MELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKE 69 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666677888888776677999999999999999999877777654
No 89
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=46.22 E-value=6.9 Score=39.12 Aligned_cols=52 Identities=21% Similarity=0.390 Sum_probs=45.2
Q ss_pred ChHHHHHHHHHHhcCCChhhHHhhhhhhhccccCChhhhhhhhhcCCCCCCCCCCCchhhhhh
Q 038880 1 GFYEQVKELRERCKQLPAEYFVVLVGDMITEEALPTYQTMLNTIDGVRDETGASLTSWATWIR 63 (276)
Q Consensus 1 ~f~~~v~~lr~~a~~Lpd~~~v~lv~~~lTEd~LPtY~~~l~~~~gv~~~~g~~~~~W~~W~~ 63 (276)
+|.|+|+-.=|.-+.+|++.+.+|..|+ -.+.-.+|-.++||. -++|..|+-
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-------~~~~~~~~~ 528 (556)
T 2w3p_A 477 DWADEIRIALEERAAMSPDALTGLEANL----RFNGPETMETRIFGR-------LTAWQNWIF 528 (556)
T ss_dssp THHHHHHHHHHHHHHSCHHHHHHHHHHH----SSCSCCCHHHHHHTH-------HHHHHHHHH
T ss_pred ChHHHHHHHHHHHhccCcchhccchhhc----ccCCchhhhhHHHHH-------hHHHHHHhh
Confidence 5889998777777789999999999998 478888999999998 889999975
No 90
>4hw4_A Induced myeloid leukemia cell differentiation Pro 1; anti-apoptotic protein, BH3 peptides, apoptosis; 1.53A {Homo sapiens} PDB: 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 2kbw_A 4hw3_A* 4hw2_A* 3d7v_A 3io9_A 2nl9_A* 2nla_A 4g35_A* 1wsx_A 2jm6_B 2roc_A 2rod_A 3mk8_B
Probab=45.89 E-value=29 Score=28.74 Aligned_cols=32 Identities=22% Similarity=0.501 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhh
Q 038880 140 EKRHELAYTKIVEKLFEIDPDDAILALAGMMKK 172 (276)
Q Consensus 140 E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~ 172 (276)
|.+|..+|.+++. -|.+.|+.++..|..||.+
T Consensus 51 e~~~~~~f~~m~~-~L~it~~~a~~~F~~Va~e 82 (157)
T 4hw4_A 51 QRNHETAFQGMLR-KLDIKNEDDVKSLSRVMIH 82 (157)
T ss_dssp HHHTHHHHHHHHH-HHCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCCCCchHHHHHHHHHHH
Confidence 7889999999996 6889999999999999974
No 91
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=44.58 E-value=54 Score=29.38 Aligned_cols=42 Identities=19% Similarity=0.346 Sum_probs=35.1
Q ss_pred HHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchh
Q 038880 119 RLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDD 161 (276)
Q Consensus 119 r~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~ 161 (276)
++......|-+...++..+..|+.|..+|+.+++.+.. ||.+
T Consensus 84 ~~~~~v~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~-d~~e 125 (286)
T 3olj_A 84 RFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIK-DPKE 125 (286)
T ss_dssp THHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CHHH
Confidence 34444678999999999999999999999999999873 6654
No 92
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=44.36 E-value=23 Score=32.31 Aligned_cols=37 Identities=8% Similarity=0.197 Sum_probs=32.4
Q ss_pred HHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 119 RLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 119 r~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
++......|-...+++..+..|+.|..+|+.+++.+.
T Consensus 108 ~l~~~v~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~ 144 (311)
T 2o1z_A 108 KFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYI 144 (311)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4555566899999999999999999999999999875
No 93
>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=42.78 E-value=1.2e+02 Score=23.90 Aligned_cols=57 Identities=12% Similarity=0.144 Sum_probs=45.8
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
++...|-...=.|...--.+++..++|.+.||++...++.-|-.++..|.-|.+..+
T Consensus 94 ~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll~~~l~~~Ek~~w~l~~~l 150 (158)
T 2c41_A 94 TVKQMIEEAIANHELIITEMHQDAEIATEAGDIGTADLYTRLVQTHQKHRWFLKEFL 150 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344555555556777777788899999999999999999999999999988877665
No 94
>3ihu_A Transcriptional regulator, GNTR family; YP_298823.1, DNA binding protein, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.92A {Ralstonia eutropha}
Probab=42.66 E-value=1.1e+02 Score=25.43 Aligned_cols=60 Identities=18% Similarity=0.074 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHhHhhc--------hhhHH---HHHHHHHHHHHHhcCchhHHHHHHHHHh
Q 038880 109 ATFISHGNTARLAKEHGDMKLAQICGVIAS--------DEKRH---ELAYTKIVEKLFEIDPDDAILALAGMMK 171 (276)
Q Consensus 109 AT~ish~ntar~a~~~gDpvLa~il~~IA~--------DE~rH---~~fY~~iv~~~le~dPd~tm~Aia~~m~ 171 (276)
+-.-||.-+++ .+|+|.|.+++..+.. ....+ ..-...|++++..-||+.+..++...+.
T Consensus 140 ~d~~FH~~i~~---~s~N~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~eH~~I~~Ai~~~d~~~A~~~~~~Hl~ 210 (222)
T 3ihu_A 140 ARRHFYRTLLE---MGDNRELRRLFPTIHMPIVHAQHRLASLRQMRLDDYRRIATAVLAGEPDAAEAAGAAHVK 210 (222)
T ss_dssp HHHHHHHHHHH---HHCCHHHHHHHHHHHCHHHHHHTTGGGGHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHhccchhhhhhHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 45568995555 5789999888876632 11111 2356889999999999999988888775
No 95
>2kua_A BCL-2-like protein 10; BOO, DIVA, apoptosis, BH3-only, membrane, mitochondri nucleus, transmembrane; NMR {Mus musculus}
Probab=42.19 E-value=37 Score=28.48 Aligned_cols=43 Identities=9% Similarity=0.175 Sum_probs=31.6
Q ss_pred HHHHHhHhhch-hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhccCC
Q 038880 129 LAQICGVIASD-EKRHELAYTKIVEKLFEIDPDDAILALAGMMKKTIKM 176 (276)
Q Consensus 129 La~il~~IA~D-E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~~~~M 176 (276)
++..+++++.+ |.+|..+|+++. ..|+.+...|..|+.+-|.=
T Consensus 43 ~~~~Lr~v~~ele~~~~~~f~~~~-----~~~~~a~~~f~~Va~elF~d 86 (170)
T 2kua_A 43 EAALLRSVTRQIQQEHQEFFSSFC-----ESRGNRLELVKQMADKLLSK 86 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-----TTTSCHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-----CCcchHHHHHHHHHHHHhcc
Confidence 34455555544 678999999999 68999999999999753433
No 96
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=41.73 E-value=12 Score=31.84 Aligned_cols=61 Identities=11% Similarity=0.153 Sum_probs=45.9
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcc-hHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGL-PSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l-~~r~~r 247 (276)
.+.+|||.-.+.. .+-|+..++.+-+..+++..+++.. =|-|=.|.-|..+-... |.|+++
T Consensus 58 a~DlrGhG~S~~~--------------~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~ 121 (276)
T 2wj6_A 58 VPNWRGHGLSPSE--------------VPDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPR 121 (276)
T ss_dssp EECCTTCSSSCCC--------------CCCCCHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCC
T ss_pred EeCCCCCCCCCCC--------------CCCCCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhce
Confidence 4567888654431 1358888898888899999998865 48888899898888777 777655
No 97
>1ohu_A Apoptosis regulator CED-9; BCL-2 family; 2.03A {Caenorhabditis elegans} SCOP: f.1.4.1 PDB: 1ty4_A
Probab=41.50 E-value=55 Score=27.56 Aligned_cols=50 Identities=14% Similarity=0.217 Sum_probs=35.0
Q ss_pred HHHHHhHhhch-hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhccCCccc
Q 038880 129 LAQICGVIASD-EKRHELAYTKIVEKLFEIDPDDAILALAGMMKKTIKMPAH 179 (276)
Q Consensus 129 La~il~~IA~D-E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~~~~MP~~ 179 (276)
+..++++|+.+ |.+|..+|++++..+- ++|+.+...+..|+.+-|.|-..
T Consensus 45 ~~~~Lr~vgdelE~~~~~~f~~m~~qL~-i~~~~a~~~f~~Va~elF~~~~e 95 (175)
T 1ohu_A 45 EHEMMRVMGTIFEKKHAENFETFSEQLL-AVPRISFSLYQDVVRTVGNAQTD 95 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT-SSSSCCHHHHHHHHTTSCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCchhHHHHHHHHHHHhcccCC
Confidence 33444444433 5689999999997765 78999999999999877776443
No 98
>1mhy_B Methane monooxygenase hydroxylase; oxidoreductase, NADP, one-carbon metabolism; 2.00A {Methylosinus trichosporium} SCOP: a.25.1.2 PDB: 1mhz_B
Probab=40.66 E-value=11 Score=36.02 Aligned_cols=65 Identities=11% Similarity=-0.065 Sum_probs=50.0
Q ss_pred CCcchhhhhhh--hhhhHHHHHHHH-HHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCc
Q 038880 95 NPYNGFIYTSF--QERATFISHGNT-ARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDP 159 (276)
Q Consensus 95 ~p~~~~vYtsf--QE~AT~ish~nt-ar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dP 159 (276)
+|.+.++...| -=.-|.+....+ +++|...||.+...|+..+-.||.||+.-=..+|+.++|.||
T Consensus 243 Dw~E~~vA~nlv~E~l~~~L~~~~~~~~~Aa~nGD~~tptl~~s~q~D~~Rh~~~~~alvk~lle~d~ 310 (395)
T 1mhy_B 243 DWNEILWAGHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQSQTYFQTTRGAIDDLFVYCLANDS 310 (395)
T ss_dssp CHHHHHHHHHHTHHHHHHHHHHTTTHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCTCT
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44444443332 334456666667 788888999999999999999999999999999999997784
No 99
>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A
Probab=40.50 E-value=1.5e+02 Score=24.19 Aligned_cols=66 Identities=17% Similarity=0.060 Sum_probs=55.9
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD 160 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd 160 (276)
+|...|--.--+|+...-+..++.++|...+||.+..++..+=.++..|..-...++..+=.+-++
T Consensus 83 ~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~fl~eQve~~~~l~~~l~~l~~~g~~ 148 (168)
T 3e6s_A 83 SPEDVWQSILELEQANTRSLLNLAEAASTCHDFAVMAFLNPFHLQQVNEEDKIGSILAKVTDENRT 148 (168)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 556677666677888888899999999999999999999999999999999999998876555444
No 100
>2fjc_A Antigen TPF1; mini ferritin, iron binding protein, metal transport; 2.50A {Treponema pallidum} SCOP: a.25.1.1
Probab=40.43 E-value=59 Score=26.14 Aligned_cols=45 Identities=18% Similarity=0.014 Sum_probs=36.9
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
|......++...++|.+.||++.+.|+..|-.|+..|.-|.+..+
T Consensus 110 ~~~~i~~~r~~i~~a~~~~D~~T~dll~~il~~~Ek~~w~L~a~l 154 (156)
T 2fjc_A 110 FEYLSTRFSQTQVLAAESGDAVTDGIITDILRTLGKAIWMLGATL 154 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445556677777888888999999999999999999988877654
No 101
>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A
Probab=40.06 E-value=1.4e+02 Score=24.38 Aligned_cols=55 Identities=9% Similarity=-0.016 Sum_probs=43.1
Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 97 YNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 97 ~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
-..+--..=.|....-.++...++|.+.||++.+.++..|-.|+..|.-|.+..+
T Consensus 116 ~e~l~~~l~~e~~~i~~~r~~i~~a~e~~D~~T~dll~~~l~~~Ek~~w~L~a~l 170 (182)
T 1tjo_A 116 RTSLANDMAIYGDIIEATREHTELAENLGDHATAHMLREGLIELEDDAHHIEHYL 170 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444445666666788888889999999999999999999999988777654
No 102
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=39.36 E-value=18 Score=30.22 Aligned_cols=61 Identities=23% Similarity=0.280 Sum_probs=45.8
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||.-.+... +-|+..++.+-+..+++..++... =|-|-.|--|..+....|.|+++
T Consensus 58 ~~D~rG~G~S~~~~--------------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~ 120 (266)
T 3om8_A 58 RYDARGHGASSVPP--------------GPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIER 120 (266)
T ss_dssp EECCTTSTTSCCCC--------------SCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEE
T ss_pred EEcCCCCCCCCCCC--------------CCCCHHHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhhe
Confidence 45778886554321 357888888888889999988765 49999999999988777777554
No 103
>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A
Probab=39.16 E-value=1.7e+02 Score=24.53 Aligned_cols=65 Identities=9% Similarity=0.021 Sum_probs=55.5
Q ss_pred CCCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHh-HhhchhhHHHHHHHHHHHHHHhcC
Q 038880 94 NNPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICG-VIASDEKRHELAYTKIVEKLFEID 158 (276)
Q Consensus 94 ~~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~-~IA~DE~rH~~fY~~iv~~~le~d 158 (276)
.++...|-.+--+|+.-.-+..++.++|...+||.+...+. .+-.++..|......++..+=.+-
T Consensus 91 ~s~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~~fL~EQve~i~~l~~~l~~l~~~g 156 (191)
T 3kxu_A 91 GKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLG 156 (191)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 36677888777789988888999999999999999999998 599999999999999887765553
No 104
>3pk1_A Induced myeloid leukemia cell differentiation Pro 1; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens}
Probab=39.06 E-value=30 Score=29.67 Aligned_cols=42 Identities=17% Similarity=0.379 Sum_probs=33.0
Q ss_pred HHHHhHhhch-hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhh
Q 038880 130 AQICGVIASD-EKRHELAYTKIVEKLFEIDPDDAILALAGMMKK 172 (276)
Q Consensus 130 a~il~~IA~D-E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~ 172 (276)
.+.|.+|+.+ |.+|..+|.+++. -|.+.|+.++..|..|+.+
T Consensus 73 ~~~Lr~vgdEle~~~~~~F~~m~~-qL~it~~~a~~~F~~Va~e 115 (189)
T 3pk1_A 73 LETLRRVGDGVQRNHETAFQGMLR-KLDIKNEDDVKSLSRVMIH 115 (189)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHH-HHTCCSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCchHHHHHHHHHHH
Confidence 3455555544 7889999999996 4888999888889999875
No 105
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=38.25 E-value=74 Score=24.59 Aligned_cols=47 Identities=21% Similarity=0.101 Sum_probs=37.8
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEK 153 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~ 153 (276)
|......|.+.+..++..|=|.++..+..+|.+|..|..-+.+.+..
T Consensus 18 E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~ 64 (158)
T 2y3q_A 18 ELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILF 64 (158)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555667778888776777899999999999999999877777654
No 106
>2bk6_A Non-heme iron-containing ferritin; DPS (DNA binding protein from starved cells), ferroxidase center, mutagenesis study; 2.19A {Listeria innocua} SCOP: a.25.1.1 PDB: 1qgh_A 2bjy_A 2iy4_A 2bkc_A
Probab=37.49 E-value=50 Score=26.51 Aligned_cols=46 Identities=9% Similarity=0.043 Sum_probs=37.2
Q ss_pred hhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 106 QERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 106 QE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
-|......++...++|.+.||++.+.|+..|-.|+..|.-|.+..+
T Consensus 105 ~~~~~i~~~r~~i~~a~~~~D~~T~dll~~il~~~Ek~~w~L~a~l 150 (156)
T 2bk6_A 105 TLELLRDEYKQGIELTDKEGDDVTNDMLIAFKASIDKHIWMFKAFL 150 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhHCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455556677777888888999999999999999999988877654
No 107
>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}
Probab=36.72 E-value=95 Score=24.65 Aligned_cols=57 Identities=11% Similarity=0.015 Sum_probs=45.8
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
++...|-...=.|...--++++..++|.+.||++-..++.-|-.++..|.-|.+..+
T Consensus 91 ~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll~~~l~e~Ek~~w~L~a~l 147 (156)
T 2d5k_A 91 SAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYL 147 (156)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444566666666777777788899999888999999999999999999988876654
No 108
>2gs4_A Protein YCIF; stress proteins, rubrerythrin, metal binding protein; 2.00A {Escherichia coli} SCOP: a.25.1.4
Probab=34.47 E-value=77 Score=26.34 Aligned_cols=47 Identities=23% Similarity=0.238 Sum_probs=40.6
Q ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHH
Q 038880 108 RATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 108 ~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~ 154 (276)
.=.--+|+.+..+|+..|++..+++|..+=.+|.+|-...+.+-+..
T Consensus 111 hyEIA~YgtL~a~A~~lG~~~~~~lL~~~L~EE~~~d~~L~~la~~~ 157 (166)
T 2gs4_A 111 HYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINN 157 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445689999999999999999999999999999999999887653
No 109
>3sxy_A Transcriptional regulator, GNTR family; transcription factor, metal-binding, structur genomics, PSI-2, protein structure initiative; 1.65A {Thermotoga maritima} PDB: 3dbw_A 3fms_A*
Probab=34.29 E-value=1.5e+02 Score=24.47 Aligned_cols=60 Identities=17% Similarity=0.135 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHhHhhc----------hhhHHHHHHHHHHHHHHhcCchhHHHHHHHHHh
Q 038880 109 ATFISHGNTARLAKEHGDMKLAQICGVIAS----------DEKRHELAYTKIVEKLFEIDPDDAILALAGMMK 171 (276)
Q Consensus 109 AT~ish~ntar~a~~~gDpvLa~il~~IA~----------DE~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~ 171 (276)
+-.-||.-+.+ .+|+|.|..++..+.. +-..-......|++++..-||+.+..++...+.
T Consensus 133 ~d~~FH~~i~~---~s~N~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~H~~i~~ai~~~d~~~A~~~~~~Hl~ 202 (218)
T 3sxy_A 133 SDERLHKLFIR---ASGNELIISLYEKIWDRIDLVRHLNERYVVSNREHKELIERIISGDKEGAIEKLKEHLK 202 (218)
T ss_dssp HHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHTGGGCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35568995555 6889999988877642 112223467889999999999999888887775
No 110
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=34.23 E-value=64 Score=30.01 Aligned_cols=46 Identities=22% Similarity=0.201 Sum_probs=37.4
Q ss_pred HHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchhHHHHH
Q 038880 120 LAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDDAILAL 166 (276)
Q Consensus 120 ~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~tm~Ai 166 (276)
+......|-+...+...+.-|+.|...|+.|++.+. .||+....++
T Consensus 95 ~~~~v~~pE~~~~l~~~~~~E~iHs~sYs~il~tl~-~~~~e~f~~i 140 (375)
T 1mxr_A 95 LLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV-NDPSVVFDDI 140 (375)
T ss_dssp TGGGBCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-SCHHHHHHHH
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHH
Confidence 444567899999999999999999999999999985 5787644443
No 111
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=34.03 E-value=74 Score=30.01 Aligned_cols=37 Identities=16% Similarity=0.250 Sum_probs=31.9
Q ss_pred HHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 119 RLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 119 r~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
++......|-+..+++..+..|+.|..+|+.+++.+.
T Consensus 149 ~~~~~v~~pE~~~~~~~Q~~~EaiHsesYS~il~tl~ 185 (390)
T 1h0o_A 149 RFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185 (390)
T ss_dssp THHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4555567999999999999999999999999998853
No 112
>2cf7_A DPR; peroxide resistance, DPS-family, ferritin-like, ferroxidase, iron-binding; HET: EPE; 1.50A {Streptococcus suis} PDB: 2ux1_A* 2bw1_A* 1umn_A* 2v15_A* 2xjm_A* 2xjn_A* 2xjo_A* 2xkq_A*
Probab=34.00 E-value=60 Score=26.48 Aligned_cols=46 Identities=15% Similarity=0.085 Sum_probs=37.1
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVE 152 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~ 152 (276)
|......++...++|.+.||++-+.|+..|-.|+..|.-|.+..++
T Consensus 115 ~~~~i~~~r~~i~~a~~~~D~~T~dll~~il~~~Ek~~w~L~a~L~ 160 (165)
T 2cf7_A 115 FRYLAALFQKGFDVSDEEGDSVTNDIFNVAKASIEKHIWMLQAELG 160 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4445556777778888889999999999999999999888776543
No 113
>2chp_A MRGA, metalloregulation DNA-binding stress protein; DNA-binding protein, DPS, dodecameric, ferritin; 2.0A {Bacillus subtilis}
Probab=33.82 E-value=71 Score=25.53 Aligned_cols=45 Identities=11% Similarity=0.048 Sum_probs=35.7
Q ss_pred hhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHH
Q 038880 106 QERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKI 150 (276)
Q Consensus 106 QE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~i 150 (276)
-|......++...++|.+.||++.+.|+..|-.|+..|.-|.+..
T Consensus 107 ~~~~~i~~~r~~i~~a~~~~D~~T~dll~~il~~~Ek~~w~L~a~ 151 (153)
T 2chp_A 107 DYKQISSESKFVIGLAEENQDNATADLFVGLIEEVEKQVWMLSSY 151 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344555567777778888899999999999999999998877654
No 114
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=33.54 E-value=18 Score=31.19 Aligned_cols=61 Identities=15% Similarity=0.010 Sum_probs=45.5
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||...+.. .+.|+..++.+-+..+++..++++. =|-|=.|--|..+....|.|+++
T Consensus 60 a~Dl~G~G~S~~~--------------~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~ 122 (316)
T 3afi_E 60 APDLIGFGQSGKP--------------DIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRG 122 (316)
T ss_dssp EECCTTSTTSCCC--------------SSCCCHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEE
T ss_pred EECCCCCCCCCCC--------------CCCCCHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhh
Confidence 4677888654321 1358999999888999999998765 48888999999888766766554
No 115
>2hs5_A Putative transcriptional regulator GNTR; APC6050, rhodococcus SP. RH structural genomics, PSI-2, protein structure initiative; 2.20A {Rhodococcus SP} SCOP: a.4.5.6 a.78.1.1
Probab=33.27 E-value=1.5e+02 Score=25.11 Aligned_cols=59 Identities=10% Similarity=0.077 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHhHhhch-----------hh---HHHHHHHHHHHHHHhcCchhHHHHHHHHHh
Q 038880 110 TFISHGNTARLAKEHGDMKLAQICGVIASD-----------EK---RHELAYTKIVEKLFEIDPDDAILALAGMMK 171 (276)
Q Consensus 110 T~ish~ntar~a~~~gDpvLa~il~~IA~D-----------E~---rH~~fY~~iv~~~le~dPd~tm~Aia~~m~ 171 (276)
..-||.-+.+ .+|+|.|..++..+..- .. .-..-...|++++..-||+.+..++...+.
T Consensus 150 d~~FH~~i~~---~s~N~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~eH~~I~~Ai~~~D~~~A~~~m~~Hl~ 222 (239)
T 2hs5_A 150 DIHFHSALAS---LNNSNRIDELMRSVWNEARLVFHVMDDAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLE 222 (239)
T ss_dssp HHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3468885554 68899999888766431 01 112235678888899999988888777664
No 116
>2yjk_A AFP, DPS; metal-binding protein, iron uptake, ferritin fold; 2.00A {Microbacterium arborescens} PDB: 2yjj_A
Probab=33.11 E-value=82 Score=25.42 Aligned_cols=45 Identities=7% Similarity=0.005 Sum_probs=35.6
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVE 152 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~ 152 (276)
|......++... +|.+.||++.+.|+..|-.|+..|.-|.+..++
T Consensus 116 ~~~~i~~~r~~i-~a~~~~D~~T~dll~~il~~~Ek~~w~L~a~l~ 160 (161)
T 2yjk_A 116 IDAALVDLQAAI-DGLDEVDLTSQDVAIEIKRGVDKDRWFLLAHLA 160 (161)
T ss_dssp HHHHHHHHHHHH-HHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhcccCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444445566666 888889999999999999999999888876653
No 117
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=32.76 E-value=64 Score=27.12 Aligned_cols=45 Identities=20% Similarity=0.195 Sum_probs=36.5
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
|.....-|--.|+.|+..|=|.++.+....|..|.-|+.-+-+.+
T Consensus 20 E~~A~~~Yl~~A~~a~~~G~~~iA~~f~~~A~eE~~HA~~~~~~l 64 (191)
T 1lko_A 20 ESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFL 64 (191)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455566777888889999999999999999999997666665
No 118
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=32.71 E-value=53 Score=30.37 Aligned_cols=36 Identities=11% Similarity=0.226 Sum_probs=31.1
Q ss_pred HHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 120 LAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 120 ~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
+......|-...+++..+..|+.|..+|+.+++.+.
T Consensus 110 l~~~v~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~ 145 (349)
T 2p1i_A 110 FLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYI 145 (349)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 444456899999999999999999999999998774
No 119
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=32.71 E-value=1e+02 Score=23.83 Aligned_cols=47 Identities=17% Similarity=0.034 Sum_probs=37.0
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEK 153 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~ 153 (276)
|......|.+.+..++..|=+.++..+..+|.+|..|..-+.+.+..
T Consensus 18 E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~ 64 (161)
T 1jgc_A 18 ELTAISQYWVHFRLQEDWGLAKMAKKSREESIEEMGHADKIIARILF 64 (161)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555567778888777788899999999999999999877665543
No 120
>2wlu_A DPS-like peroxide resistance protein; DNA-binding, oxidoreductase; 1.94A {Streptococcus pyogenes} PDB: 2wla_A
Probab=32.55 E-value=64 Score=26.60 Aligned_cols=45 Identities=7% Similarity=-0.056 Sum_probs=36.8
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
|......++...++|.+.||++.+.|+..|-.|+..|.-|.+..+
T Consensus 125 ~~~~i~~~r~~i~~ae~~~D~~T~dll~~il~~~Ek~~w~L~a~L 169 (175)
T 2wlu_A 125 YLYLSSLYQVGLDITDEEGDAGTNDLFTAAKTEAEKTIWMLQAER 169 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445555677777888888999999999999999999988877654
No 121
>3hl1_A Ferritin like protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Caulobacter vibrioides}
Probab=32.02 E-value=49 Score=30.72 Aligned_cols=47 Identities=13% Similarity=-0.051 Sum_probs=33.2
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKL 154 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~ 154 (276)
|.+|-..|- +|-..=+-.+....+++..|+.+|.+|+.--.|++.++
T Consensus 22 E~stIp~YL-~a~ySi~~~n~~~~~~i~~V~~eEMlHl~l~aNll~Ai 68 (317)
T 3hl1_A 22 ELWTIPYYL-TVLYSIKDPTTVPYRLIQAAVYQEMLHAQLVSNIANAY 68 (317)
T ss_dssp HHHHHHHHH-HHHHHBSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-HHHhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 666666555 22221111234677899999999999999999999886
No 122
>1o9r_A Agrobacterium tumefaciens DPS; iron-binding protein, DNA protection from oxidative damage, DNA-binding, iron- binding protein; 1.45A {Agrobacterium tumefaciens} SCOP: a.25.1.1 PDB: 3ge4_A*
Probab=31.63 E-value=66 Score=25.94 Aligned_cols=44 Identities=14% Similarity=-0.020 Sum_probs=35.3
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKI 150 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~i 150 (276)
|......++...++|.+.||++.+.++..|-.|+..|.-|.+..
T Consensus 114 ~~~~i~~~r~~i~~a~~~~D~~T~dll~~il~~~Ek~~w~L~a~ 157 (162)
T 1o9r_A 114 YGEVANMIRKAIDDSDEAGDPTTADIFTAASRDLDKSLWFLEAH 157 (162)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445567777788888999999999999999999998876654
No 123
>3kwo_A Putative bacterioferritin; alpha-helix, bacterial ferritin fold, structural genomics, center for structural genomics of infectious diseases; 1.99A {Campylobacter jejuni} SCOP: a.25.1.0
Probab=31.36 E-value=1e+02 Score=24.58 Aligned_cols=45 Identities=7% Similarity=-0.028 Sum_probs=36.4
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
|......++...++|.+.||++.+.|+.-|-.|+..|.-|.+..+
T Consensus 102 ~~~~i~~~r~~i~~a~~~~D~~T~dll~~~l~~~Ek~~w~L~a~l 146 (152)
T 3kwo_A 102 YEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATL 146 (152)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555677777788888999999999999999999988776554
No 124
>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=31.05 E-value=1e+02 Score=28.46 Aligned_cols=37 Identities=19% Similarity=0.209 Sum_probs=32.3
Q ss_pred HHHHHhCCHHHHHHHhHhhchhh-HHHHHHHHHHHHHH
Q 038880 119 RLAKEHGDMKLAQICGVIASDEK-RHELAYTKIVEKLF 155 (276)
Q Consensus 119 r~a~~~gDpvLa~il~~IA~DE~-rH~~fY~~iv~~~l 155 (276)
++......|-+..+++..+.-|+ .|...|+.+++.+.
T Consensus 97 ~~~~~v~~pE~~~~~~~q~~~E~aiHs~sYs~il~tl~ 134 (350)
T 4dr0_A 97 IVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLA 134 (350)
T ss_dssp HHHHHSCSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHS
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44445668999999999999999 99999999999886
No 125
>2w3l_A BCL2-XL, apoptosis regulator BCL-2; HET: DRO; 2.10A {Homo sapiens} PDB: 2o2f_A*
Probab=30.92 E-value=49 Score=26.53 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhccC
Q 038880 140 EKRHELAYTKIVEKLFEIDPDDAILALAGMMKKTIK 175 (276)
Q Consensus 140 E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~~~~ 175 (276)
|.+|..+|+++++.+ .++|+.+...|..|+.+-|.
T Consensus 43 e~~~~~~f~~~~~~l-~i~~~~~~~~f~~Va~elF~ 77 (144)
T 2w3l_A 43 SRRYRRDFAEMSSGL-HLTPFTARGRFATVVEELFR 77 (144)
T ss_dssp HHHTHHHHHHHHTTC-CCCTTTHHHHHHHHHHHHTT
T ss_pred HHHhHHHHHHHHHHc-CCCCccHHHHHHHHHHHHhc
Confidence 678999999998875 78899999999999875444
No 126
>2c2u_A DPS, DNA-binding stress response protein; DNA-binding protein, iron; 1.1A {Deinococcus radiodurans} PDB: 2c2f_A 2f7n_A
Probab=30.68 E-value=94 Score=26.62 Aligned_cols=45 Identities=11% Similarity=0.011 Sum_probs=36.9
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
|......++....+|...||++.+.|+..|-.|+..|.-|.+..+
T Consensus 157 e~~~i~~~re~i~~aee~~D~~T~dLl~~il~~~EkhiW~L~a~L 201 (207)
T 2c2u_A 157 LSRVGKGYRDDSQACDEANDPVTADMYNGYAATIDKIRWMLQAIM 201 (207)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445556677788888889999999999999999999988776654
No 127
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=30.51 E-value=23 Score=29.75 Aligned_cols=62 Identities=18% Similarity=0.201 Sum_probs=44.5
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||.-.+.... ..|+..++.+-+..+++..++.+. =|-|=.|--|..+....|.|+++
T Consensus 68 ~~D~~G~G~S~~~~~-------------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~ 131 (286)
T 2puj_A 68 LKDSPGFNKSDAVVM-------------DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGK 131 (286)
T ss_dssp EECCTTSTTSCCCCC-------------SSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEE
T ss_pred EECCCCCCCCCCCCC-------------cCcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhhe
Confidence 467888876554220 147777887777788888888765 48899999999888777766554
No 128
>2xgw_A Peroxide resistance protein; metal binding protein; 2.10A {Streptococcus pyogenes}
Probab=30.42 E-value=71 Score=27.21 Aligned_cols=45 Identities=7% Similarity=-0.056 Sum_probs=37.1
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
|......++...++|.+.||++.+.|+..|-.|+..|.-|.+..+
T Consensus 141 e~~~i~~~re~i~~aee~~D~~T~dll~~il~~~Ekh~w~L~a~L 185 (199)
T 2xgw_A 141 YLYLSSLYQVGLDITDEEGDAGTNDLFTAAKTEAEKTIWMLQAER 185 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555677777888888999999999999999999988877654
No 129
>3ilc_A BCL-2-like protein 1; apoptosis, BH3 domain, alternative splicing, cytoplasm, membrane, mitochondrion, transmembrane; 1.64A {Mus musculus} PDB: 3ihd_A 2bzw_A 1pq1_A 1pq0_A 3ihc_A 3iih_A 1af3_A 3ihf_A 3ilb_A 3iig_A 3ihe_A
Probab=30.15 E-value=22 Score=30.89 Aligned_cols=44 Identities=16% Similarity=0.308 Sum_probs=36.4
Q ss_pred HHHHHHhHhhch-hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhh
Q 038880 128 KLAQICGVIASD-EKRHELAYTKIVEKLFEIDPDDAILALAGMMKK 172 (276)
Q Consensus 128 vLa~il~~IA~D-E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~ 172 (276)
.+.+.|.+|+.+ |.+|..+|++++.. |.+.|+.+...|..|+.+
T Consensus 86 ~V~~~Lr~lGdElE~~~~~~F~~m~~q-L~it~~~a~~~F~~Va~e 130 (197)
T 3ilc_A 86 AVKQALREAGDEFELRARRAFSDLTSQ-LHITPGTAYQSFEQVVNE 130 (197)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCHHHHHH-HCCCTTCCHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHH-hCCCcchHHHHHHHHHHH
Confidence 455666666555 58999999999999 899999999999999974
No 130
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=30.15 E-value=1.2e+02 Score=24.17 Aligned_cols=47 Identities=19% Similarity=0.081 Sum_probs=37.5
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEK 153 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~ 153 (276)
|......|.+.+..++..|=|.++.++..+|.+|..|..-+.+.+..
T Consensus 20 E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~ 66 (174)
T 3qb9_A 20 ELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILL 66 (174)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555567777887776677999999999999999999877776654
No 131
>2y6w_A BCL-2-like protein 2; apoptosis; HET: PGE; 2.00A {Homo sapiens} PDB: 1mk3_A 1zy3_A
Probab=30.04 E-value=69 Score=26.80 Aligned_cols=43 Identities=14% Similarity=0.302 Sum_probs=30.7
Q ss_pred HHHhHhhch-hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhcc
Q 038880 131 QICGVIASD-EKRHELAYTKIVEKLFEIDPDDAILALAGMMKKTI 174 (276)
Q Consensus 131 ~il~~IA~D-E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~~~ 174 (276)
..|.+|+.+ |.+|..+|++++..+ .++|+.+...|..|+.+-|
T Consensus 57 ~~Lr~~gdele~~~~~~f~~~~~~l-~i~~~~~~~~f~~Va~elF 100 (177)
T 2y6w_A 57 QAMRAAGDEFETRFRRTFSDLAAQL-HVTPGSAQQRFTQVSDELF 100 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhc-CCCCccHHHHHHHHHHHHh
Confidence 333444333 668999999999776 5688888888888887534
No 132
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=29.72 E-value=85 Score=28.50 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=31.8
Q ss_pred HHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHh
Q 038880 120 LAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFE 156 (276)
Q Consensus 120 ~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le 156 (276)
+......|-....++.++..|+.|..+|+.+++.+..
T Consensus 78 ~~~~~~~pe~~~~~~~q~~~E~iHs~sYs~il~tl~~ 114 (319)
T 3n37_A 78 LMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQ 114 (319)
T ss_dssp HGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3344668999999999999999999999999998763
No 133
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=29.66 E-value=87 Score=28.17 Aligned_cols=37 Identities=24% Similarity=0.236 Sum_probs=32.1
Q ss_pred HHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHh
Q 038880 120 LAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFE 156 (276)
Q Consensus 120 ~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le 156 (276)
+......|-....++..+..|+.|..+|+.+++.+..
T Consensus 87 ~~~~~~~pe~~~~~~~q~~~E~iHs~sYs~il~tl~~ 123 (296)
T 3mjo_A 87 LLPDAETMHEEAVYTNIAFMESVHAKSYSNIFMTLAS 123 (296)
T ss_dssp HGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4445668999999999999999999999999998873
No 134
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=29.40 E-value=1.3e+02 Score=22.95 Aligned_cols=47 Identities=21% Similarity=0.026 Sum_probs=35.6
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEK 153 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~ 153 (276)
|......|.+.+..++..|=+.++..+..+|.+|..|..-+.+.+..
T Consensus 18 E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~ 64 (155)
T 2fkz_A 18 ELIAINQYFLHARMYEDWGLEKLGKHEYHESIDEMKHADKLIKRILF 64 (155)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556677777777778899999999999999999866665543
No 135
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=28.82 E-value=32 Score=28.59 Aligned_cols=62 Identities=18% Similarity=0.184 Sum_probs=43.9
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccc-cccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWE-VEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~-v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||.-.+... .+.|+..+|.+-+..+++..+ +.+. =|-|=.|--|..+....|.|+++
T Consensus 42 a~Dl~G~G~S~~~~-------------~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~ 106 (264)
T 2wfl_A 42 AVDLSAAGINPRRL-------------DEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISV 106 (264)
T ss_dssp EECCTTSTTCSCCG-------------GGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHCGGGEEE
T ss_pred EeecCCCCCCCCCc-------------ccccCHHHHHHHHHHHHHHhCCCCCeEEEEeChHHHHHHHHHHhChhhhce
Confidence 45678886544311 236888889877888889886 4543 48888888888888777777665
No 136
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=28.64 E-value=35 Score=28.65 Aligned_cols=62 Identities=19% Similarity=0.206 Sum_probs=45.6
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||.-.+... ...|+..++.+-+..+++..++.+. =|-|=.|--|..+....|.|+++
T Consensus 59 ~~Dl~G~G~S~~~~-------------~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~ 122 (282)
T 1iup_A 59 APDMVGFGFTDRPE-------------NYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDR 122 (282)
T ss_dssp EECCTTSTTSCCCT-------------TCCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEE
T ss_pred EECCCCCCCCCCCC-------------CCCCCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHH
Confidence 46778886554321 0147888888878888899988765 48999999999988777776654
No 137
>3iq1_A DPS family protein; csgid, SAD, niaid, metal transport, STRU genomics, center for structural genomics of infectious DISE; 1.67A {Vibrio cholerae o1 biovar el tor}
Probab=28.63 E-value=94 Score=24.96 Aligned_cols=45 Identities=11% Similarity=0.092 Sum_probs=35.4
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
|......++...++|.+.||++-+.|+.-|-.|+..|.=|.+..+
T Consensus 114 ~~~~i~~~r~~i~~ae~~~D~~T~dll~~~l~~~Ek~~WmL~a~l 158 (159)
T 3iq1_A 114 FSILLHQQRDILELAGETGDEGTSALMSDYIREQEKLVWMLNAWL 158 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHcCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445555677777788888999999999999999999977766543
No 138
>3p7i_A PHND, subunit of alkylphosphonate ABC transporter; phosphonate binding protein, transport protein; 1.71A {Escherichia coli UTI89} PDB: 3qk6_A 3quj_A* 3s4u_A
Probab=28.34 E-value=1.2e+02 Score=26.95 Aligned_cols=61 Identities=25% Similarity=0.303 Sum_probs=41.0
Q ss_pred HHHHHHHhcCC-----ChhhHHHH--HHHHHhccccccccCCCHHHHHHHHHHhcchHHHHHHHHHHHhh
Q 038880 193 FSAVAQRLGVY-----TAKDYADI--LAFLIERWEVEKLMGLTSEGRKARDFVCGLPSRIRRLEDKAQAN 255 (276)
Q Consensus 193 ~s~v~araGiY-----~~~dy~~V--l~~ll~~W~v~~~~gL~~eg~~Ar~~l~~l~~r~~r~~er~~~~ 255 (276)
+..++.+.|+. +..+|..| ++-.-++-+++.=+.|+++++++| |..+.+++.+++.|..+.
T Consensus 243 ~~~~l~~~g~~gf~~~~~~dy~~ir~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 310 (321)
T 3p7i_A 243 EKAVLERLGWAPFRASSDLQLVPIRQLALFKEMQSVKDNKGLNEQDKLAK--TTAIQAQLDDLDRLNNAL 310 (321)
T ss_dssp HHHHHHHHTEEEEEECCGGGGHHHHHHHHHHHHHHHHTCTTCCHHHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcCCeeeCCHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 34455555544 45567655 455555666666679999998775 778888888888776655
No 139
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=27.14 E-value=36 Score=28.39 Aligned_cols=63 Identities=13% Similarity=0.035 Sum_probs=45.8
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||.-.+... ..+.|+..++.+-+..+++..++... =|-|=.|--|..+....|.|+++
T Consensus 65 ~~D~~G~G~S~~~~------------~~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~ 129 (313)
T 1azw_A 65 LFDQRGSGRSTPHA------------DLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTE 129 (313)
T ss_dssp EECCTTSTTSBSTT------------CCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEE
T ss_pred EECCCCCcCCCCCc------------ccccccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeE
Confidence 56788887654321 02356777777667788888888764 49999999999988887877654
No 140
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=26.98 E-value=40 Score=28.27 Aligned_cols=62 Identities=21% Similarity=0.128 Sum_probs=44.4
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccc-cccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWE-VEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~-v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||.-.+... .+.|+..+|.+-+..+++..+ +.+. =|-|=.|--|+.+....|.|+++
T Consensus 36 a~Dl~G~G~S~~~~-------------~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~P~~v~~ 100 (273)
T 1xkl_A 36 ALDLAASGTDLRKI-------------EELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYA 100 (273)
T ss_dssp ECCCTTSTTCCCCG-------------GGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEE
T ss_pred EecCCCCCCCccCc-------------ccccCHHHHHHHHHHHHHHhccCCCEEEEecCHHHHHHHHHHHhChHhheE
Confidence 45778886544311 246899999877788999986 4543 48888888899888777877665
No 141
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=26.77 E-value=86 Score=28.65 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=30.9
Q ss_pred HHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHh
Q 038880 122 KEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFE 156 (276)
Q Consensus 122 ~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le 156 (276)
.....|-+...++..+..|+.|..+|+.+++.+..
T Consensus 90 ~~~~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~ 124 (329)
T 3dhz_A 90 PDAETMHEEAVYTNIAFMESVHAKSYSNIFMTLAS 124 (329)
T ss_dssp GGCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34567999999999999999999999999998763
No 142
>4aq3_A Apoptosis regulator BCL-2, BCL-2-like protein 1; chimera; HET: 398; 2.40A {Homo sapiens} PDB: 1g5m_A 1gjh_A 1ysw_A* 2o21_A* 2o22_A*
Probab=26.23 E-value=93 Score=25.92 Aligned_cols=43 Identities=14% Similarity=0.195 Sum_probs=33.3
Q ss_pred HHHHHhHhhch-hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhh
Q 038880 129 LAQICGVIASD-EKRHELAYTKIVEKLFEIDPDDAILALAGMMKK 172 (276)
Q Consensus 129 La~il~~IA~D-E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~ 172 (276)
+...|.+|+.+ |.+|..+|.+++..+ .++|+.+...|..|+.+
T Consensus 55 v~~~Lr~igdele~~~~~~f~~~~~~L-~it~~~a~~~F~~Va~e 98 (169)
T 4aq3_A 55 VHLALRQAGDDFSRRYRGDFAEMSSQL-HLTPFTARGRFATVVEE 98 (169)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHC-CCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHc-CCCCCcHHHHHHHHHHH
Confidence 33444444443 677999999999887 88999999999999975
No 143
>2pyb_A NAPA, neutrophil activating protein; ferritin, DPS, four-helix bundle, metal transport; 2.60A {Borrelia burgdorferi}
Probab=25.92 E-value=97 Score=24.61 Aligned_cols=45 Identities=20% Similarity=0.152 Sum_probs=36.6
Q ss_pred hhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHH
Q 038880 106 QERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKI 150 (276)
Q Consensus 106 QE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~i 150 (276)
-|....-.++...++|.+.||++-+.|+..|-.|+..|.-|.+..
T Consensus 102 ~~~~~i~~~r~~i~~a~~~~D~~T~dll~~il~~~Ek~~w~L~a~ 146 (151)
T 2pyb_A 102 SLTEILKNIFGMRKLIDTAGDYGTANIMDDIMSDLEKHLWMHKAL 146 (151)
T ss_dssp THHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355556667778888888899999999999999999998776543
No 144
>2a5y_A Apoptosis regulator CED-9; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: f.1.4.1
Probab=25.50 E-value=85 Score=27.13 Aligned_cols=48 Identities=15% Similarity=0.251 Sum_probs=34.4
Q ss_pred HHHhHhhch-hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhccCCccc
Q 038880 131 QICGVIASD-EKRHELAYTKIVEKLFEIDPDDAILALAGMMKKTIKMPAH 179 (276)
Q Consensus 131 ~il~~IA~D-E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~~~~MP~~ 179 (276)
.+|.+|+.+ |.+|..+|.+++..+- ++|+.+...|..|+.+-|.|-..
T Consensus 67 ~~Lr~vgdelE~~~~~~f~~m~~qL~-i~~~~a~~~F~~Va~elF~~~~e 115 (204)
T 2a5y_A 67 EMMRVMGTIFEKKHAENFETFSEQLL-AVPRISFSLYQDVVRTVGNAQTD 115 (204)
T ss_dssp HHHHHHHHHHHHHTCTTHHHHHHHHH-SSSSCCHHHHHHHHTTTTCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCCchhHHHHHHHHHHHhcccCC
Confidence 444444333 5589999999997765 78888899999999877776543
No 145
>1hw1_A FADR, fatty acid metabolism regulator protein; helix-turn-helix, helix bundle, transcription; 1.50A {Escherichia coli} SCOP: a.4.5.6 a.78.1.1 PDB: 1hw2_A 1e2x_A 1h9g_A* 1h9t_A
Probab=25.29 E-value=2.3e+02 Score=23.47 Aligned_cols=61 Identities=11% Similarity=-0.010 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHhHhhc-----------hhhH---HHHHHHHHHHHHHhcCchhHHHHHHHHHh
Q 038880 108 RATFISHGNTARLAKEHGDMKLAQICGVIAS-----------DEKR---HELAYTKIVEKLFEIDPDDAILALAGMMK 171 (276)
Q Consensus 108 ~AT~ish~ntar~a~~~gDpvLa~il~~IA~-----------DE~r---H~~fY~~iv~~~le~dPd~tm~Aia~~m~ 171 (276)
.+-.-||..++. .+|+|.|..++..+.. +... -......|++++..-||+.+..++...+.
T Consensus 143 ~~d~~fh~~i~~---~~~n~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~H~~I~~Ai~~~D~~~A~~~m~~Hl~ 217 (239)
T 1hw1_A 143 ELDYNIFRGLAF---ASGNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGH 217 (239)
T ss_dssp HHHHHHHHHHHH---HTTCHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHH---HCCCcHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345568886655 4779988777654421 1111 12346789999999999999988887775
No 146
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=25.21 E-value=75 Score=24.18 Aligned_cols=47 Identities=19% Similarity=0.136 Sum_probs=33.4
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEK 153 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~ 153 (276)
|......|.+.+..++..|=+.++..+..+|.+|..|..-+.+.+..
T Consensus 22 E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~ 68 (149)
T 2qqy_A 22 EYSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKT 68 (149)
T ss_dssp HHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556666666543334678999999999999999876666543
No 147
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=25.05 E-value=44 Score=27.53 Aligned_cols=61 Identities=18% Similarity=0.273 Sum_probs=43.0
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||.-.+... +-|+..++.+-+..+++..++... =|-|-.|--|..+....|.|+++
T Consensus 57 ~~D~~G~G~S~~~~--------------~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~ 119 (266)
T 2xua_A 57 RYDTRGHGHSEAPK--------------GPYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIER 119 (266)
T ss_dssp EECCTTSTTSCCCS--------------SCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEE
T ss_pred EecCCCCCCCCCCC--------------CCCCHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhhe
Confidence 46788886554321 247888887777788888887654 48888888888877666665443
No 148
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=25.04 E-value=37 Score=28.14 Aligned_cols=60 Identities=10% Similarity=0.027 Sum_probs=44.5
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRI 245 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~ 245 (276)
.+.+|||.-.+... ..-|+..++.+-+..+++..++.+. =|.|=.|--|..+....|.|+
T Consensus 46 ~~Dl~G~G~S~~~~-------------~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v 107 (268)
T 3v48_A 46 CYDQRGTGNNPDTL-------------AEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASV 107 (268)
T ss_dssp ECCCTTBTTBCCCC-------------CTTCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTE
T ss_pred EECCCCCCCCCCCc-------------cccCCHHHHHHHHHHHHHHcCCCCeEEEEecHHHHHHHHHHHhChhhc
Confidence 56788886544321 1247888898888889999998764 489999999999887777654
No 149
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=24.80 E-value=1.6e+02 Score=23.16 Aligned_cols=44 Identities=16% Similarity=0.093 Sum_probs=34.2
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKI 150 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~i 150 (276)
|......|-..+..++..|=+.++......|.+|..|+.-+.+.
T Consensus 18 El~A~~~Y~~~a~~~~~~g~~~~a~~f~~~a~eE~~HA~~l~~~ 61 (159)
T 4am5_A 18 ELTAVSQYWLHYRMLEDWGYKDLAKKWRAESIEEMAHADKFVER 61 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555556666777777899999999999999999998654443
No 150
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=24.75 E-value=38 Score=27.79 Aligned_cols=58 Identities=16% Similarity=0.241 Sum_probs=39.9
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPS 243 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~ 243 (276)
.+.+|||.-.+... ...|+..++.+-+..+++..++... =|-|=.|--|..+....|.
T Consensus 47 ~~Dl~G~G~S~~~~-------------~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 106 (269)
T 2xmz_A 47 TIDLPGHGEDQSSM-------------DETWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHI 106 (269)
T ss_dssp EECCTTSTTCCCCT-------------TSCCCHHHHHHHHHHHHGGGTTSEEEEEEETHHHHHHHHHHHHCSS
T ss_pred EecCCCCCCCCCCC-------------CCccCHHHHHHHHHHHHHHcCCCcEEEEEECchHHHHHHHHHhCch
Confidence 56788886655421 0157888888888888888887655 3888888888776644443
No 151
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4
Probab=24.61 E-value=79 Score=26.47 Aligned_cols=43 Identities=14% Similarity=0.156 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHH
Q 038880 109 ATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIV 151 (276)
Q Consensus 109 AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv 151 (276)
=.--+|+.+..+|+..|++..+++|..+=.+|.+|-...+.+-
T Consensus 118 yEIA~YgtL~a~A~~lG~~e~~~lL~~~L~EE~~~d~~L~~la 160 (173)
T 2gyq_A 118 YEIARYGTLIAWAEELGHDDIVRFLTTNLNEEKAANTKLNTVA 160 (173)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445688999999999999999999999999999988777654
No 152
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=24.47 E-value=45 Score=27.86 Aligned_cols=64 Identities=11% Similarity=0.123 Sum_probs=45.3
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||.-.+...+ ..+.|+..++.+-+..+++..++.+. =|-|=.|--|..+....|.|+++
T Consensus 56 ~~D~rG~G~S~~~~~-----------~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 121 (298)
T 1q0r_A 56 RYDHRDTGRSTTRDF-----------AAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSS 121 (298)
T ss_dssp EECCTTSTTSCCCCT-----------TTSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEE
T ss_pred eeCCCCCCCCCCCCC-----------CcCCcCHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhhe
Confidence 467888866554111 01358888888778888898888765 48899999998887766666554
No 153
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=23.83 E-value=29 Score=28.76 Aligned_cols=62 Identities=16% Similarity=0.131 Sum_probs=43.4
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccc-cccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWE-VEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~-v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||.-.+.. ..+.|+..+|.+-+..+++..+ +.+. =|-|=.|--|+.+....|.|+++
T Consensus 35 a~Dl~G~G~S~~~-------------~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~ 99 (257)
T 3c6x_A 35 ALDLAASGVDPRQ-------------IEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAA 99 (257)
T ss_dssp EECCTTSTTCSCC-------------GGGCCSHHHHTHHHHHHHHTSCTTCCEEEEEEETHHHHHHHHHHHHGGGEEE
T ss_pred EeCCCCCCCCCCC-------------cccccCHHHHHHHHHHHHHhccccCCeEEEEECcchHHHHHHHHhCchhhhe
Confidence 4567777654331 1246899999777788889985 4443 48888888898888777776555
No 154
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=23.74 E-value=44 Score=27.88 Aligned_cols=63 Identities=16% Similarity=0.035 Sum_probs=45.5
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||.-.+... ....|+..++.+-+..+++..++... =|-|=.|--|..+....|.|+++
T Consensus 68 ~~D~~G~G~S~~~~------------~~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 132 (317)
T 1wm1_A 68 LFDQRGCGRSRPHA------------SLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSE 132 (317)
T ss_dssp EECCTTSTTCBSTT------------CCTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEE
T ss_pred EECCCCCCCCCCCc------------ccccccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheee
Confidence 56788886554321 02356777777777888888888764 49999999999988888877654
No 155
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=23.43 E-value=96 Score=28.54 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=31.7
Q ss_pred HHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHH
Q 038880 120 LAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLF 155 (276)
Q Consensus 120 ~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~l 155 (276)
+......|-+..+++..+..|+.|..+|+.+++.+.
T Consensus 104 l~~~v~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~ 139 (345)
T 1jk0_B 104 FSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFF 139 (345)
T ss_dssp HHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 444566899999999999999999999999999885
No 156
>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}
Probab=22.93 E-value=1.7e+02 Score=24.13 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=47.6
Q ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCchh
Q 038880 95 NPYNGFIYTSFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPDD 161 (276)
Q Consensus 95 ~p~~~~vYtsfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd~ 161 (276)
++...|--..=.|...--++++...+|.+. |++...++.-|-.++.-|...+..+++ -+|++
T Consensus 112 ~~~e~l~~~l~~e~~v~~~~~~~i~~A~e~-D~~T~dlL~~~l~e~ee~~~~l~~~L~----~~~~g 173 (188)
T 2clb_A 112 DPKEILKVLLEAEQCAIRTWKEVCDMTYGK-DPRTYDLAQRILQEEIEHEAWFLELLY----GRPSG 173 (188)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHS----CCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCc
Confidence 344455555556666667788888888888 999999999999999999999887764 44554
No 157
>4eve_A Neutrophil-activating protein; dodecamer, four-helix bundle, metal transport; 2.10A {Helicobacter pylori} PDB: 4evd_A 3t9j_A 3ta8_A 4evb_A 4evc_A 1ji4_A
Probab=22.92 E-value=1.7e+02 Score=23.71 Aligned_cols=44 Identities=7% Similarity=-0.052 Sum_probs=34.8
Q ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHH
Q 038880 107 ERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKI 150 (276)
Q Consensus 107 E~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~i 150 (276)
|......++...++|.+.||++.+.|+.-|-.|+..|.=|.+..
T Consensus 119 ~~~~i~~~r~~i~~aee~~D~~T~dll~~il~~~Ek~~WmL~a~ 162 (164)
T 4eve_A 119 YKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLQAH 162 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45555567777778888899999999999999999887776544
No 158
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=22.83 E-value=46 Score=27.17 Aligned_cols=60 Identities=17% Similarity=0.263 Sum_probs=39.6
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRIRR 247 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~~r 247 (276)
.+.+|||.-.+... .|+..++.+-+..+++..++... =|-|=.|--|..+....|.|+++
T Consensus 47 a~Dl~G~G~S~~~~---------------~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 108 (255)
T 3bf7_A 47 QVDVRNHGLSPREP---------------VMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDK 108 (255)
T ss_dssp EECCTTSTTSCCCS---------------CCCHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEE
T ss_pred EecCCCCCCCCCCC---------------CcCHHHHHHHHHHHHHHcCCCCeeEEeeCccHHHHHHHHHhCcHhhcc
Confidence 46778886544311 35666676666677777777654 38888888888877666665544
No 159
>2ims_A Apoptosis regulator BAK; dimer; 1.48A {Homo sapiens} PDB: 2imt_A 2jcn_A 2yv6_A 3qbr_B* 2xpx_B 2jby_B 2voh_B*
Probab=22.27 E-value=78 Score=26.13 Aligned_cols=32 Identities=6% Similarity=0.262 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHHHHhcCchhHHHHHHHHHhh
Q 038880 140 EKRHELAYTKIVEKLFEIDPDDAILALAGMMKK 172 (276)
Q Consensus 140 E~rH~~fY~~iv~~~le~dPd~tm~Aia~~m~~ 172 (276)
|.+|..+|++++.. |.++|+.+...|..|+.+
T Consensus 71 e~~~~~~f~~m~~~-l~~~~~~~~~~f~~Va~e 102 (171)
T 2ims_A 71 NRRYDSEFQTMLQH-LQPTAENAYEYFTKIATS 102 (171)
T ss_dssp CHHHHHHHHHHHTT-CCSSHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHH-cCCCcccHHHHHHHHHHH
Confidence 67899999999987 578899999999999975
No 160
>1otk_A Protein PAAC, phenylacetic acid degradation protein PAAC; structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: a.25.1.2 PDB: 3pvt_B* 3pvr_B* 3pvy_B* 3pw1_B* 3pw8_A* 3pwq_A
Probab=22.23 E-value=4.1e+02 Score=23.48 Aligned_cols=115 Identities=15% Similarity=0.094 Sum_probs=70.0
Q ss_pred Ccchhhhh-hhhhhhHHHHHHHHHHHHHHhCCHHHHHHHhHhhchhhHHHHHHHHHHHHHHhcCch---hHHHHHHHHHh
Q 038880 96 PYNGFIYT-SFQERATFISHGNTARLAKEHGDMKLAQICGVIASDEKRHELAYTKIVEKLFEIDPD---DAILALAGMMK 171 (276)
Q Consensus 96 p~~~~vYt-sfQE~AT~ish~ntar~a~~~gDpvLa~il~~IA~DE~rH~~fY~~iv~~~le~dPd---~tm~Aia~~m~ 171 (276)
|...|+.| .+|=.-..--+-+...+.+ +.++.|+.++.+|.+.|.-|..+=.+.|..+-+-.++ .+-.|+..+..
T Consensus 87 P~gdwa~ti~r~~l~d~~~~~~~~~L~~-ss~~plA~ia~K~~kEe~yH~~h~~~w~~rL~~gT~Es~~r~Q~Al~~~wp 165 (249)
T 1otk_A 87 PNGNFADTIARQYFIDAWHVALFTRLME-SRDPQLAAISAKAIKEARYHLRFSRGWLERLGNGTDVSGQKMQQAINKLWR 165 (249)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 44445433 2233323333445556654 6799999999999999999999999999987643333 45566666653
Q ss_pred hccCCccccCCCCCcchhhhhHHHHHHHhcCCCh-hh----HHHHHHHHHhccccc
Q 038880 172 KTIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTA-KD----YADILAFLIERWEVE 222 (276)
Q Consensus 172 ~~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~-~d----y~~Vl~~ll~~W~v~ 222 (276)
- ...|..-.+ ....+.+.||-.. .+ +.+.+.+++..-++.
T Consensus 166 ~-----~~elF~~~~------~~~~l~~~Gi~~~~~~Lr~~w~~~v~~~l~~agL~ 210 (249)
T 1otk_A 166 F-----TAELFDADE------IDIALSEEGIAVDPRTLRAAWEAEVFAGINEATLN 210 (249)
T ss_dssp G-----TGGGGCCCH------HHHHHHHTTSSCCGGGGHHHHHHHHHHHHHHTTCC
T ss_pred H-----HHHHcCCCc------cHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 1 111222111 2345566666543 32 457788888876664
No 161
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=21.36 E-value=44 Score=27.74 Aligned_cols=61 Identities=18% Similarity=0.290 Sum_probs=43.8
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRIR 246 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~~ 246 (276)
.+.+|||...+.... ..|+..++.+.+..+++..++... =|-|=.|--|..+....|.|++
T Consensus 71 ~~D~~G~G~S~~~~~-------------~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~ 133 (289)
T 1u2e_A 71 LLDCPGWGKSDSVVN-------------SGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVG 133 (289)
T ss_dssp EECCTTSTTSCCCCC-------------SSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEE
T ss_pred EEcCCCCCCCCCCCc-------------cccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhh
Confidence 567888876554220 146777787778888888888654 4889999999988877776644
No 162
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=20.77 E-value=34 Score=28.89 Aligned_cols=61 Identities=18% Similarity=0.188 Sum_probs=42.2
Q ss_pred ccCCccccCCCCCcchhhhhHHHHHHHhcCCChhhHHHHHHHHHhccccccc--cCCCHHHHHHHHHHhcchHHHH
Q 038880 173 TIKMPAHLMYDGQNDKIFYHFSAVAQRLGVYTAKDYADILAFLIERWEVEKL--MGLTSEGRKARDFVCGLPSRIR 246 (276)
Q Consensus 173 ~~~MP~~~m~dg~~~~lf~~~s~v~araGiY~~~dy~~Vl~~ll~~W~v~~~--~gL~~eg~~Ar~~l~~l~~r~~ 246 (276)
.+.+|||.-.+.... ..|+..++.+-+..+++..++.+. =|-|=.|--|..+....|.|++
T Consensus 70 a~Dl~G~G~S~~~~~-------------~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~ 132 (291)
T 2wue_A 70 AVDQPGYGHSDKRAE-------------HGQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAG 132 (291)
T ss_dssp EECCTTSTTSCCCSC-------------CSSHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEE
T ss_pred EECCCCCCCCCCCCC-------------CCcCHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhc
Confidence 567888876554220 136777887777788888888654 3888888888887765555543
No 163
>2di3_A Bacterial regulatory proteins, GNTR family; helix-turn-helix, transcription; 2.05A {Corynebacterium glutamicum}
Probab=20.60 E-value=2.9e+02 Score=23.00 Aligned_cols=60 Identities=8% Similarity=-0.002 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHhHhhch---------------hh---HHHHHHHHHHHHHHhcCchhHHHHHHHHH
Q 038880 109 ATFISHGNTARLAKEHGDMKLAQICGVIASD---------------EK---RHELAYTKIVEKLFEIDPDDAILALAGMM 170 (276)
Q Consensus 109 AT~ish~ntar~a~~~gDpvLa~il~~IA~D---------------E~---rH~~fY~~iv~~~le~dPd~tm~Aia~~m 170 (276)
+-.-||.-+++ .+|+|.|..++..+..- .. .-..-...|++++-.-||+.+..++...+
T Consensus 143 ~d~~FH~~i~~---~s~N~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~eH~~I~~Ai~~~D~~~A~~~m~~Hl 219 (239)
T 2di3_A 143 FDAEFHVVISK---GAENPLISTLMEALRLSVADHTVARARALPDWRATSARLQKEHRAILAALRAGESTVAATLIKEHI 219 (239)
T ss_dssp HHHHHHHHHHT---TBSSHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HcCCHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 44568995555 68899998887655321 11 11223577888888889988887777666
Q ss_pred h
Q 038880 171 K 171 (276)
Q Consensus 171 ~ 171 (276)
.
T Consensus 220 ~ 220 (239)
T 2di3_A 220 E 220 (239)
T ss_dssp H
T ss_pred H
Confidence 4
No 164
>2yg9_A DNA-3-methyladenine glycosidase II, putative; hydrolase, DNA repair; 1.95A {Deinococcus radiodurans} PDB: 2yg8_A
Probab=20.35 E-value=2.9e+02 Score=23.53 Aligned_cols=117 Identities=15% Similarity=0.060 Sum_probs=67.4
Q ss_pred CHHHHHHHhHhhch--hhHHHHHHHHHHHHHHhcC-chhHHHHHHHHHhhccCCccc-cCCCCCcchhhhhHHHHHHHhc
Q 038880 126 DMKLAQICGVIASD--EKRHELAYTKIVEKLFEID-PDDAILALAGMMKKTIKMPAH-LMYDGQNDKIFYHFSAVAQRLG 201 (276)
Q Consensus 126 DpvLa~il~~IA~D--E~rH~~fY~~iv~~~le~d-Pd~tm~Aia~~m~~~~~MP~~-~m~dg~~~~lf~~~s~v~araG 201 (276)
||.|+.+......= --.+..-|.-+|..++... .......+-..+.+.|--|.- .+..-. ...+..+|
T Consensus 39 D~~l~~l~~~~~~~~~~~~~~dpfe~Lv~~IlsQq~s~~~a~~~~~rL~~~~G~ptp~~la~~~--------~e~Lr~~G 110 (225)
T 2yg9_A 39 DPVLAQVTSLCGELPVLAPTPDPFGRLVRSVAGQQLSVKAAQAIYGRLEGLPGGVVPAALLKVS--------GDDLRGVG 110 (225)
T ss_dssp SHHHHHHHHHHCCCCCCCCCSCHHHHHHHHHHHTTSCHHHHHHHHHHHHTSTTCSCHHHHTTSC--------HHHHHHTT
T ss_pred CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHhCcChHHHHHHHHHHHHHHhCcCCHHHHHcCC--------HHHHHHCC
Confidence 88888888877543 2345567888898888764 334444444444445522211 011111 12347799
Q ss_pred CCChhh-H-HHHHHHHHh-ccccccccCCCHHHHHHHHHHhcchHHHHHHHHHH
Q 038880 202 VYTAKD-Y-ADILAFLIE-RWEVEKLMGLTSEGRKARDFVCGLPSRIRRLEDKA 252 (276)
Q Consensus 202 iY~~~d-y-~~Vl~~ll~-~W~v~~~~gL~~eg~~Ar~~l~~l~~r~~r~~er~ 252 (276)
.|..+- | .++.+.+++ ...++.+.+++ -+.+++.|+.||.=-.+-++-.
T Consensus 111 ~~~~KA~~i~~lA~~~~~g~~~l~~l~~~~--~~e~~~~L~~l~GIG~~TA~~i 162 (225)
T 2yg9_A 111 LSWAKVRTVQAAAAAAVSGQIDFAHLSGQP--DELVIAELVQLPGIGRWTAEMF 162 (225)
T ss_dssp CCHHHHHHHHHHHHHHHTTSSCGGGCTTSC--HHHHHHHHHTSTTCCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhCCcCHHHHhcCC--HHHHHHHHHcCCCCCHHHHHHH
Confidence 876544 6 566666665 23444444444 3567888888887555555544
Done!