Query 038881
Match_columns 794
No_of_seqs 483 out of 3198
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 06:30:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038881.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038881hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 1E-118 3E-123 1047.5 50.7 628 138-793 1-644 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 9E-109 3E-113 967.1 48.9 612 138-793 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 4.8E-81 1.6E-85 760.8 43.7 541 155-793 6-605 (926)
4 3afg_A Subtilisin-like serine 100.0 3.6E-61 1.2E-65 553.4 37.4 364 52-651 37-418 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.2E-58 4.3E-63 515.7 21.6 344 51-651 3-392 (395)
6 3t41_A Epidermin leader peptid 100.0 4E-55 1.4E-59 499.8 29.6 358 50-652 44-466 (471)
7 1r6v_A Subtilisin-like serine 100.0 4.8E-55 1.6E-59 507.9 29.7 380 46-662 27-450 (671)
8 2p4e_P Proprotein convertase s 100.0 1.6E-57 5.6E-62 524.9 6.5 375 47-650 72-465 (692)
9 1y9z_A Alkaline serine proteas 100.0 2.9E-55 9.9E-60 495.6 23.6 391 144-672 5-437 (441)
10 1gci_A Subtilisin; hydrolase, 100.0 1.5E-52 5.1E-57 442.0 20.4 265 144-650 5-269 (269)
11 1r0r_E Subtilisin carlsberg; h 100.0 1E-52 3.5E-57 444.9 19.1 265 145-650 6-274 (274)
12 1dbi_A AK.1 serine protease; h 100.0 5.8E-52 2E-56 440.3 22.8 268 144-650 12-279 (280)
13 1to2_E Subtilisin BPN'; serine 100.0 4E-52 1.4E-56 441.7 19.9 268 144-651 5-276 (281)
14 2x8j_A Intracellular subtilisi 100.0 2.7E-52 9.1E-57 452.5 18.2 274 143-651 21-311 (327)
15 4h6x_A Thiazoline oxidase/subt 100.0 3.2E-53 1.1E-57 465.5 7.4 306 156-650 21-337 (357)
16 1thm_A Thermitase; hydrolase(s 100.0 3.5E-51 1.2E-55 434.3 21.7 267 144-650 12-278 (279)
17 2ixt_A 36KDA protease; serine 100.0 4.2E-50 1.4E-54 433.4 22.3 290 144-645 7-309 (310)
18 3zxy_A Subtilisin-like protein 100.0 4.6E-51 1.6E-55 434.8 14.1 266 162-650 3-274 (282)
19 2z30_A TK-subtilisin; thermoco 100.0 7.3E-51 2.5E-55 440.6 15.3 274 144-651 9-317 (320)
20 4h6w_A N-terminal cyanobactin 100.0 1.6E-50 5.6E-55 436.0 13.6 272 156-650 11-287 (306)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 5E-50 1.7E-54 439.5 15.6 279 144-651 24-329 (347)
22 3lxu_X Tripeptidyl-peptidase 2 100.0 2.2E-48 7.7E-53 469.3 26.3 355 239-792 267-651 (1354)
23 1sh7_A Extracellular subtilisi 100.0 2E-48 7E-53 413.4 22.1 248 144-619 5-257 (284)
24 1wmd_A Protease; alpha-beta hy 100.0 1.1E-48 3.9E-53 441.3 20.2 295 155-652 10-319 (434)
25 3lpc_A APRB2; protease, subtil 100.0 8.2E-49 2.8E-53 429.0 18.0 299 154-651 20-337 (340)
26 2b6n_A Proteinase K; S binding 100.0 6.4E-48 2.2E-52 409.0 20.9 249 144-618 7-260 (278)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 7.8E-48 2.7E-52 408.5 19.6 249 143-619 6-259 (276)
28 2pwa_A Proteinase K; structure 100.0 6.3E-48 2.2E-52 408.6 16.8 255 143-645 6-271 (279)
29 2oxa_A Extracellular serine pr 100.0 1.2E-46 4.2E-51 440.7 23.7 300 154-655 58-429 (600)
30 1p8j_A Furin precursor; prohor 100.0 1.1E-46 3.8E-51 428.6 19.2 293 154-653 26-332 (471)
31 2qtw_B Proprotein convertase s 100.0 3E-46 1E-50 420.6 18.2 291 145-650 4-313 (546)
32 2id4_A Kexin; KEX2, kexin, fur 100.0 6.3E-46 2.1E-50 425.2 19.6 285 154-653 42-344 (503)
33 3f7m_A Alkaline serine proteas 100.0 7E-46 2.4E-50 394.1 17.8 230 157-619 24-261 (279)
34 3hjr_A Extracellular serine pr 100.0 7.7E-44 2.6E-48 418.6 27.0 298 154-653 58-427 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 4.3E-25 1.5E-29 253.3 7.3 97 269-373 273-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 9.9E-22 3.4E-26 214.9 11.3 99 271-373 90-206 (372)
37 2w2n_P Proprotein convertase s 99.1 9.7E-11 3.3E-15 105.5 6.4 81 46-136 33-113 (114)
38 3edy_A Tripeptidyl-peptidase 1 99.0 6.9E-10 2.3E-14 126.4 10.4 98 271-373 262-374 (544)
39 3cnq_P Subtilisin BPN'; unclea 99.0 1.4E-09 4.8E-14 91.6 9.7 75 47-140 5-79 (80)
40 2qtw_A Proprotein convertase s 99.0 4E-10 1.4E-14 102.7 6.5 94 33-136 29-123 (124)
41 3icu_A E3 ubiquitin-protein li 98.7 3.8E-08 1.3E-12 96.1 11.1 94 422-515 82-187 (194)
42 1v5i_B POIA1, IA-1=serine prot 98.7 2.5E-08 8.4E-13 82.9 8.1 70 51-136 3-75 (76)
43 2z30_B TK-subtilisin; thermoco 97.3 0.00028 9.7E-09 56.2 5.6 42 93-135 22-63 (65)
44 2ek8_A Aminopeptidase; metallo 96.8 0.0028 9.6E-08 70.3 9.7 73 430-502 107-182 (421)
45 3iib_A Peptidase M28; YP_92679 96.0 0.021 7.1E-07 63.7 10.3 82 433-514 124-226 (444)
46 3fed_A Glutamate carboxypeptid 96.0 0.0056 1.9E-07 71.7 5.6 71 433-503 150-268 (707)
47 3kas_A Transferrin receptor pr 95.4 0.014 4.8E-07 67.7 6.3 69 434-502 128-230 (640)
48 2ys4_A Hydrocephalus-inducing 95.3 0.047 1.6E-06 49.1 8.2 73 707-789 41-114 (122)
49 3lxu_X Tripeptidyl-peptidase 2 88.5 0.29 9.8E-06 60.6 4.5 26 161-186 31-56 (1354)
50 3qbt_B Inositol polyphosphate 86.6 6.4 0.00022 35.9 11.5 86 707-793 43-137 (140)
51 1y9z_A Alkaline serine proteas 85.2 0.48 1.7E-05 52.5 3.8 29 523-559 183-211 (441)
52 2r39_A FIXG-related protein; s 80.7 6.1 0.00021 34.8 8.5 53 708-762 32-85 (118)
53 2e6j_A Hydin protein; PAPD, st 80.1 1.7 5.7E-05 37.8 4.5 55 707-762 26-82 (112)
54 3idu_A Uncharacterized protein 74.8 12 0.00041 33.5 8.5 51 706-760 32-84 (127)
55 2qsv_A Uncharacterized protein 68.8 15 0.00051 36.1 8.7 79 707-791 19-103 (220)
56 3zyz_A Beta-D-glucoside glucoh 65.6 16 0.00054 42.8 9.3 86 707-793 613-712 (713)
57 3qis_A Inositol polyphosphate 65.4 51 0.0017 35.0 12.6 86 707-793 46-140 (366)
58 1m1s_A WR4; structural genomic 63.2 65 0.0022 28.1 10.6 51 709-762 25-76 (116)
59 2x41_A Beta-glucosidase; hydro 61.0 15 0.00053 43.0 8.1 55 707-762 615-678 (721)
60 3abz_A Beta-glucosidase I; gly 51.0 24 0.00083 42.0 7.6 160 574-759 618-795 (845)
61 2qsv_A Uncharacterized protein 50.5 88 0.003 30.4 10.5 78 707-790 134-217 (220)
62 1z9l_A Vesicle-associated memb 46.9 51 0.0018 29.1 7.4 52 707-761 27-79 (128)
63 3isy_A Bsupi, intracellular pr 43.8 92 0.0032 27.3 8.3 69 706-778 17-104 (120)
64 1msp_A MSP, major sperm protei 41.3 53 0.0018 29.1 6.5 51 708-761 26-77 (126)
65 1wic_A Hypothetical protein ri 41.3 59 0.002 29.8 7.1 53 707-762 35-88 (152)
66 1wgl_A TOLL-interacting protei 38.6 21 0.00071 27.2 2.8 34 582-615 3-36 (59)
67 1row_A SSP-19, MSP-domain prot 38.0 1.1E+02 0.0036 26.4 7.7 50 710-762 18-68 (109)
68 1w8o_A Bacterial sialidase; 3D 37.2 1.9E+02 0.0064 32.6 12.1 63 696-762 363-427 (601)
69 2kq1_A BH0266 protein; solutio 34.5 8 0.00027 34.1 -0.1 53 710-762 56-111 (119)
70 2l0d_A Cell surface protein; s 33.7 1.2E+02 0.004 26.4 7.3 24 706-729 18-43 (114)
71 2cri_A Vesicle-associated memb 32.8 71 0.0024 29.0 6.1 52 707-761 31-83 (147)
72 3hrz_B Cobra venom factor; ser 28.4 1.6E+02 0.0053 29.4 8.3 65 694-761 85-155 (252)
73 2kut_A Uncharacterized protein 26.2 31 0.001 30.5 2.2 55 706-762 15-75 (122)
74 3q48_A Chaperone CUPB2; IG fol 24.3 5.3E+02 0.018 25.6 12.4 53 707-761 42-104 (257)
75 3e9t_A Na/Ca exchange protein; 23.8 1.8E+02 0.0062 24.9 6.9 63 697-761 9-77 (114)
76 1ni7_A ER75, hypothetical prot 22.8 57 0.002 30.1 3.4 33 576-609 77-109 (155)
77 4acq_A Alpha-2-macroglobulin; 21.7 2.2E+02 0.0074 36.2 9.6 66 693-761 771-840 (1451)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=1e-118 Score=1047.53 Aligned_cols=628 Identities=37% Similarity=0.638 Sum_probs=567.3
Q ss_pred ccCCccccccccCCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCC-ccccccccccc
Q 038881 138 TTHSWEFLGLERNGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKD-AKFLCNRKLIG 216 (794)
Q Consensus 138 ~~~s~~~~gl~~~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~-~~~~~n~ki~g 216 (794)
++++|+|+||.. ...+|..+.+|+||+|||||||||++||+|.+.+++|+|.+|+|.|+.|.+ ....||+|+++
T Consensus 1 Tt~s~~flgl~~-----~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig 75 (649)
T 3i6s_A 1 TTHTSDFLKLNP-----SSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIG 75 (649)
T ss_dssp CCSHHHHTTCCS-----SSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEE
T ss_pred CCCChHHcCCCC-----chhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceee
Confidence 578999999974 357999999999999999999999999999999999999999999999988 77899999999
Q ss_pred eeeccccc-ccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCC
Q 038881 217 ARYFNKGY-AAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECY 295 (794)
Q Consensus 217 ~~~~~~~~-~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~ 295 (794)
+++|.+++ .. ......+..+++|.+||||||||||||+.+++.+.+|++.+.+.||||+|+|+++|+++.. | +.
T Consensus 76 ~~~f~~~~~~~-~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~--g--~~ 150 (649)
T 3i6s_A 76 ANYFNKGILAN-DPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE--G--TF 150 (649)
T ss_dssp EEECCHHHHHH-CTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETT--E--EC
T ss_pred eEeccCccccc-ccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCC--C--CC
Confidence 99999776 33 1112224567889999999999999999988889999988999999999999999999987 4 89
Q ss_pred hHHHHHHHHHhHhCCceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEeccccCCC
Q 038881 296 DADILAAFDMAIHDGVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTVSNIAPWQITVGASTMDR 375 (794)
Q Consensus 296 ~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~~~ 375 (794)
.+++++||+||+++|+||||||||.....+..+++.+++++|.++|++||+||||+|+...++.+.+||+|+|||++.+|
T Consensus 151 ~~~i~~Ai~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr 230 (649)
T 3i6s_A 151 TSDLIAAMDQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDR 230 (649)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSC
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeeccc
Confidence 99999999999999999999999998667788999999999999999999999999999999999999999999999999
Q ss_pred CccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCc--cceEEEEecCCchhhhH
Q 038881 376 DFPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKV--KGKILVCLRGDNARIDK 453 (794)
Q Consensus 376 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~g~~~~~~~ 453 (794)
.|..++.+++++++.|.+++..... ...+|+++.. ....|.+..++...+ +||||+|+|+.|.+.+|
T Consensus 231 ~f~~~~~lgng~~~~g~sl~~~~~~-~~~~plv~~~----------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k 299 (649)
T 3i6s_A 231 TFAGTLTLGNGLKIRGWSLFPARAF-VRDSPVIYNK----------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQM 299 (649)
T ss_dssp EEEEEEEETTSCEEEEECCCSSCBC-EEEEEEECCT----------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHH
T ss_pred ceeeEEEeCCCcEEeeeecccCccc-CcceeeEecc----------cccccccccccccccccCCcEEEEeCCCccHHHH
Confidence 9999999999999999999877654 6789999854 356899888887777 99999999999999999
Q ss_pred HHHHHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCC
Q 038881 454 GQQALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKG 533 (794)
Q Consensus 454 ~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~G 533 (794)
..+++++|+.|+|++|+. .....+.+.+|+++|+..+|+.|+.|++++.+++++|.+..+..+....+.++.|||||
T Consensus 300 ~~~~~~~Ga~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrG 376 (649)
T 3i6s_A 300 RIITRARLKAAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARG 376 (649)
T ss_dssp HHHHHHTCSEEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCS
T ss_pred HHHHHhcCceEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCC
Confidence 999999999999999987 34556778999999999999999999999999999999999998888899999999999
Q ss_pred CCCCCCCcccCceEeCCceEEeeecCCCCCCCCCCCC-CCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHH
Q 038881 534 PSSVAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDR-RRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIM 612 (794)
Q Consensus 534 p~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~ 612 (794)
|+...++++||||+|||++|+++|+..........+. ....|..+||||||||||||++|||||+||+|+|++||++||
T Consensus 377 P~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLm 456 (649)
T 3i6s_A 377 PSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMM 456 (649)
T ss_dssp SCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHH
T ss_pred CCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence 9987779999999999999999998865433322222 336899999999999999999999999999999999999999
Q ss_pred hcCccccCCCcccccC-CCCCCCCCcccccccccccccCCCccccCCchhhhhhhhcCCCCccceEeccccccc--CCCC
Q 038881 613 TTASIQDNNKGQILNA-SSYKATPFSYGAGHIQPNLAMDPGLVYDLTENDYLNFLCALGYNKTQIALFSDKTYR--CPEY 689 (794)
Q Consensus 613 ~TA~~~~~~g~~~~~~-~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 689 (794)
+||.++++.+.++.+. .+.+++++.||+|+||+.+|++||||||.+.+||+.|||++||+.++|+.|++.++. |++
T Consensus 457 tTA~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~- 535 (649)
T 3i6s_A 457 TTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN- 535 (649)
T ss_dssp HTCBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC-
T ss_pred cccccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC-
Confidence 9999999999998875 466888999999999999999999999999999999999999999999999998888 986
Q ss_pred CCCCCCCCCeEEeec-CCce-----EEEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEcc
Q 038881 690 VSTANFNYPSITVPK-LSGS-----IIVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVRK 762 (794)
Q Consensus 690 ~~~~~~n~ps~~~~~-~~~~-----~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~ 762 (794)
...+||||||++.. +.+. ++|+|||||||. ..||+++++.|.|++|+|+|.+|+|++.+|+++|+|||+...
T Consensus 536 -~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~ 614 (649)
T 3i6s_A 536 -PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIG 614 (649)
T ss_dssp -CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECC
T ss_pred -chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecc
Confidence 46799999999987 5555 899999999999 899999999999999999999999988899999999999876
Q ss_pred cccCCCCeEEEEEEEEeC-CccEEEeEEEEEe
Q 038881 763 VRAATKDYVFGDLVWADD-KQHQVRSPIVVNP 793 (794)
Q Consensus 763 ~~~~~~~~~~G~~~~~~~-~~~~v~~P~~~~~ 793 (794)
...+.|.||+|+|+++ +.|.||+||+|++
T Consensus 615 --~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~ 644 (649)
T 3i6s_A 615 --DEGQSRNVGSITWVEQNGNHSVRSPIVTSP 644 (649)
T ss_dssp --C---CCCEEEEEEEETTSCCEEEEEEEEEE
T ss_pred --cCCCceEEEEEEEEcCCCCeEEEEeEEEEE
Confidence 4567789999999996 7899999999986
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=8.7e-109 Score=967.09 Aligned_cols=612 Identities=42% Similarity=0.751 Sum_probs=516.8
Q ss_pred ccCCccccccccCCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccce
Q 038881 138 TTHSWEFLGLERNGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGA 217 (794)
Q Consensus 138 ~~~s~~~~gl~~~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~ 217 (794)
++++|+|+||+ ..+|.+..+|+||+|||||||||++||+|.++++++++.+|+|.|+.+.+ +.||+|++++
T Consensus 1 tt~s~~flGl~-------~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~--~~~n~k~ig~ 71 (621)
T 3vta_A 1 TTRSWDFLGFP-------LTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNN--FRCNRKIIGA 71 (621)
T ss_dssp CCSHHHHTTCC-------TTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSS--CCCCSSEEEE
T ss_pred CCCChhHcCCC-------ccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCC--cccCcceeee
Confidence 57899999997 36888889999999999999999999999999999999999999998865 7899999999
Q ss_pred eecccccccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChH
Q 038881 218 RYFNKGYAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDA 297 (794)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~ 297 (794)
++|..+. .....+..+++|++||||||||||||+.+.+.+.+|.+.+.++||||+|+|++||+|++. | |..+
T Consensus 72 ~~~~~~~----~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~--g--~~~~ 143 (621)
T 3vta_A 72 RSYHIGR----PISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWND--G--CSDT 143 (621)
T ss_dssp EECCCSS----SCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETT--E--ECHH
T ss_pred eecccCC----ccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCC--C--CCHH
Confidence 9998763 111223557889999999999999999988888888888899999999999999999987 4 8899
Q ss_pred HHHHHHHHhHhCCceEEEEccCCCC-CCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEeccccCCCC
Q 038881 298 DILAAFDMAIHDGVDVLSVSLGGGP-SKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTVSNIAPWQITVGASTMDRD 376 (794)
Q Consensus 298 ~i~~ai~~a~~~g~dVIN~SlG~~~-~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~~~~ 376 (794)
++++||++|+++|+||||||||+.. ..+..+++++++++|.++|++||+||||+|+...++++.+||+++|++++.++.
T Consensus 144 di~~a~~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~ 223 (621)
T 3vta_A 144 DILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRK 223 (621)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEE
T ss_pred HHHHHHHHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeecccc
Confidence 9999999999999999999999873 446678899999999999999999999999999999999999999999999999
Q ss_pred ccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHH
Q 038881 377 FPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQ 456 (794)
Q Consensus 377 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~ 456 (794)
+...+.++++..+.+.++.... ...+++++..+.............|.+..++..+++|||++|.++. ..+..+
T Consensus 224 ~~~~~~~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~---~~~~~~ 297 (621)
T 3vta_A 224 FVTQVQIGNGQSFQGVSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASF---GPHEFF 297 (621)
T ss_dssp EEEEEEETTSCEEEEBCCCCSC---CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCC---CHHHHH
T ss_pred ceeeEEeccCceeeeeecccCC---CcccccccccccccccccccccccccccccccccccceEEEEecCC---ChhHHh
Confidence 9999999999999998876543 5678888877766555566677889999999999999999998754 456777
Q ss_pred HHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCC
Q 038881 457 ALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSS 536 (794)
Q Consensus 457 ~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~ 536 (794)
....|+.+++++++... ..+.+.+|...++..++..++.|+..+..+.+.+...... .....+.++.||||||+.
T Consensus 298 ~~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~-~~~~~~~va~FSSrGP~~ 372 (621)
T 3vta_A 298 KSLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI-LNASAPVVVSFSSRGPNR 372 (621)
T ss_dssp HHHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEE-ECTTCCCBCTTSCCCSCT
T ss_pred hhhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEe-ccCCCCceeeecCCCCCC
Confidence 88899999999987653 2356789999999999999999999999988888665544 345678999999999998
Q ss_pred CCCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCc
Q 038881 537 VAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTAS 616 (794)
Q Consensus 537 ~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~ 616 (794)
..++++||||+|||++|+|+++....... ......|..|||||||||||||++|||||+||+|+|++||++||+||+
T Consensus 373 ~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~ 449 (621)
T 3vta_A 373 ATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTAS 449 (621)
T ss_dssp TCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCB
T ss_pred CCCCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCC
Confidence 77899999999999999999986543322 234468999999999999999999999999999999999999999999
Q ss_pred cccCCCcccccCCCCCCCCCcccccccccccccCCCccccCCchhhhhhhhcCCCCccceEecccccccCCCCC--CCCC
Q 038881 617 IQDNNKGQILNASSYKATPFSYGAGHIQPNLAMDPGLVYDLTENDYLNFLCALGYNKTQIALFSDKTYRCPEYV--STAN 694 (794)
Q Consensus 617 ~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 694 (794)
+++..+. +..+++||+|+||+.+|++||||||++.+||+.|||+++|++++++.+++....|+... ...+
T Consensus 450 ~~~~~~~--------~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (621)
T 3vta_A 450 PMNARFN--------PQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWD 521 (621)
T ss_dssp CCCTTTC--------TTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGGG
T ss_pred cccccCC--------CCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcccc
Confidence 8876543 56788999999999999999999999999999999999999999999999988898644 3779
Q ss_pred CCCCeEEee---cCCceEEEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEcccccCCCCe
Q 038881 695 FNYPSITVP---KLSGSIIVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVRKVRAATKDY 770 (794)
Q Consensus 695 ~n~ps~~~~---~~~~~~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~ 770 (794)
||||||++. .+..+++|+|||||++. ..||+++++.|.|++|+|+|.+|+|++.+|+++|+|||+. ..++.|
T Consensus 522 lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~----~~~~~~ 597 (621)
T 3vta_A 522 LNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG----SIKGFV 597 (621)
T ss_dssp SCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEE----CCCSSE
T ss_pred cccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEe----cCCCce
Confidence 999999985 44568899999999999 9999999999999999999999999888999999999976 467889
Q ss_pred EEEEEEEEeCCccEEEeEEEEEe
Q 038881 771 VFGDLVWADDKQHQVRSPIVVNP 793 (794)
Q Consensus 771 ~~G~~~~~~~~~~~v~~P~~~~~ 793 (794)
+||+|+|++ +.|.||+||+|+.
T Consensus 598 ~~g~l~w~d-~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 598 VSASLVWSD-GVHYVRSPITITS 619 (621)
T ss_dssp EEEEEEEEC-SSCCCEEEEEEEC
T ss_pred EEEEEEEEc-CCEEEEeCEEEEE
Confidence 999999998 8999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=4.8e-81 Score=760.77 Aligned_cols=541 Identities=24% Similarity=0.311 Sum_probs=422.2
Q ss_pred ccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCC----------C-ccccccccccceeecccc
Q 038881 155 SNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDK----------D-AKFLCNRKLIGARYFNKG 223 (794)
Q Consensus 155 ~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~----------~-~~~~~n~ki~g~~~~~~~ 223 (794)
+..+|..+++|+||+|||||||||++||+|.+. ..|++.|..+. . .+.+||+|++++++|.++
T Consensus 6 ~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~ 79 (926)
T 1xf1_A 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD 79 (926)
T ss_dssp CHHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC
T ss_pred cHHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccC
Confidence 458999999999999999999999999999853 56766665321 1 345899999999999754
Q ss_pred cccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHH
Q 038881 224 YAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAF 303 (794)
Q Consensus 224 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai 303 (794)
. ...|..||||||||||||+.+.+.+ .++.+.||||+|+|+++|+|++. |..+..+++++||
T Consensus 80 ~------------~~~D~~gHGThVAgiiAg~~~~~~~----~~~~~~GvAP~A~l~~~kv~~~~--g~~~~~~~i~~Ai 141 (926)
T 1xf1_A 80 G------------KTAVDQEHGTHVSGILSGNAPSETK----EPYRLEGAMPEAQLLLMRVEIVN--GLADYARNYAQAI 141 (926)
T ss_dssp S------------CCCCSSTTTTHHHHSSCCCCCCCCS----CSCCTTTTCTTSEEEEEECCCCS--CHHHHHHHHHHHH
T ss_pred C------------CCCCCCCcHHHHHHHHhCCCccCcc----cCCceEEECCCCEEEEEEeecCC--CCCCcHHHHHHHH
Confidence 1 2238899999999999998654332 13567999999999999999876 3124567899999
Q ss_pred HHhHhCCceEEEEccCCCC--CCCCCCHHHHHHHHHHhCCcEEEEecCCCCCC-------------CCCcCC--CCCceE
Q 038881 304 DMAIHDGVDVLSVSLGGGP--SKFFNDSTAIGSFHAVKHGMVVICSAGNSGPT-------------DSTVSN--IAPWQI 366 (794)
Q Consensus 304 ~~a~~~g~dVIN~SlG~~~--~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~-------------~~~~~~--~ap~vi 366 (794)
++|+++|+||||||||+.. ...+.+++..+++.|.++|++||+||||+|+. ..++.+ .+||+|
T Consensus 142 ~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vi 221 (926)
T 1xf1_A 142 RDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTL 221 (926)
T ss_dssp HHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSE
T ss_pred HHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceE
Confidence 9999999999999999873 33456778889999999999999999999963 223333 479999
Q ss_pred EeccccCCCCccceEEe-cCCeEEeeeecCC-CCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEe
Q 038881 367 TVGASTMDRDFPSYVVV-SNNKRYKGQSLSS-KGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCL 444 (794)
Q Consensus 367 tVgAs~~~~~~~~~~~~-~~~~~~~g~~~~~-~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~ 444 (794)
+|||++.++.+...+.+ +++....+.++.. ..+.....+|+++... .|.+..+ .+++||||||+
T Consensus 222 tVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~------------g~~~~~~--~~v~Gkivl~~ 287 (926)
T 1xf1_A 222 TVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR------------GTKEDDF--KDVKGKIALIE 287 (926)
T ss_dssp EEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT------------SCSTTTT--TTCTTSEEEEE
T ss_pred EEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC------------CCCccch--hhcCCeEEEEE
Confidence 99999999988888877 4443333333321 1222357789998532 4776666 68999999999
Q ss_pred cCCchhhhHHHHHHHcCceEEEEeccCCCCccc-cCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCC
Q 038881 445 RGDNARIDKGQQALLAGAVGMVLANAQENGNEL-LADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPA 523 (794)
Q Consensus 445 ~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~-~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~ 523 (794)
|+.|.+.+|..+++++||.|+|++|+....... ......+|+.+|+..+|..|+. ....+.++............
T Consensus 288 rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~~~~ 363 (926)
T 1xf1_A 288 RGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPTASG 363 (926)
T ss_dssp CCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEECSSC
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceecccCCc
Confidence 999999999999999999999999987643322 2345789999999999998874 33344443333323445567
Q ss_pred CccccccCCCCCCCCCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHh----hC
Q 038881 524 PIMAAFSSKGPSSVAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKT----LH 599 (794)
Q Consensus 524 ~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~ 599 (794)
+.++.||||||+. ++++||||+|||++|+|++++ +.|..+||||||||||||++|||+| .|
T Consensus 364 ~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~-------------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~ 428 (926)
T 1xf1_A 364 TKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVAN-------------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQY 428 (926)
T ss_dssp SBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSC-------------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSS
T ss_pred ceeccccCCCCCC--CCccCceEECCCCCEEeeccC-------------CcceecCccchhHHHHHHHHHHHHHHHhccC
Confidence 8999999999997 999999999999999999976 3899999999999999999999964 59
Q ss_pred CCCCHHH----HHHHHHhcCccccCCCcccccCCCCCCCCCcccccccccccccCCCccccCCchhhhhhhhcCCCCccc
Q 038881 600 PEWSPAA----IKSAIMTTASIQDNNKGQILNASSYKATPFSYGAGHIQPNLAMDPGLVYDLTENDYLNFLCALGYNKTQ 675 (794)
Q Consensus 600 p~lsp~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~~~~~ 675 (794)
|+|+|+| ||++||+||+++...+. ...+++++||+|+||+.+|+++.+ |+|..+++..
T Consensus 429 P~~sp~~~~~~Iks~L~~TA~~~~~~~~------~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~- 490 (926)
T 1xf1_A 429 PDMTPSERLDLAKKVLMSSATALYDEDE------KAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS- 490 (926)
T ss_dssp SSSHHHHHHHHHHHHHHHHSBCCEEGGG------TEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS-
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccCCC------CccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc-
Confidence 9999997 99999999998754321 224678899999999999999854 5677665432
Q ss_pred eEecccccccCCCCCCCCCCCCCeEEeecCCceEEEEEEEEecCC-C--ceEEEEEeC--CCCcEEEEEccEEEEe----
Q 038881 676 IALFSDKTYRCPEYVSTANFNYPSITVPKLSGSIIVSRTVRNVGS-P--GTYIARVRN--PKGISVSVEPRSLKFL---- 746 (794)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~n~ps~~~~~~~~~~~~~~tv~n~~~-~--~ty~~~~~~--~~g~~v~~~p~~~~~~---- 746 (794)
+|.++++....+++|||+|+|+ + .+|++++.. |.+..++++|..+.+.
T Consensus 491 -----------------------~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~ 547 (926)
T 1xf1_A 491 -----------------------KVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQK 547 (926)
T ss_dssp -----------------------CEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEE
T ss_pred -----------------------eeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCe
Confidence 3344444567899999999997 4 567777765 6688888888765443
Q ss_pred ---cCCcEEEEEEEEEEccc------ccCCCCeEEEEEEEEeC-Ccc-EEEeEEEEEe
Q 038881 747 ---RVGEEKNFKVTIKVRKV------RAATKDYVFGDLVWADD-KQH-QVRSPIVVNP 793 (794)
Q Consensus 747 ---~~~~~~~~~vt~~~~~~------~~~~~~~~~G~~~~~~~-~~~-~v~~P~~~~~ 793 (794)
++||+++|+|||++... .++++.|+||+|+|+++ +.| .||+||++..
T Consensus 548 vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 548 ITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred EEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 45999999999998620 13467789999999953 545 5999999864
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=3.6e-61 Score=553.36 Aligned_cols=364 Identities=32% Similarity=0.457 Sum_probs=289.3
Q ss_pred cEEEEeCCCCCCCCccccccccchHHHHHHHHHhcCCCCCCCcceEEEecceeeeEEEEeCHHHHHHH-----------H
Q 038881 52 HHCCQKGAHSHGPELSAVDLHRVTESHYEFLGSFLHGNDNPEDAIFYSYTRHINGFAAKLDDAVAAEI-----------A 120 (794)
Q Consensus 52 ~YIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ng~s~~~~~~~i~~L-----------~ 120 (794)
.|||+|++.... +...++++.+ ..++.++|+ .|+||+++++++++++| +
T Consensus 37 ~~iV~~~~~~~~------------~~~~~~~~~~-------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~ 96 (539)
T 3afg_A 37 STIIMFDNQADK------------EKAVEILDFL-------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNA 96 (539)
T ss_dssp EEEEEESSHHHH------------HHHHHHHHHH-------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CC
T ss_pred EEEEEECCCCCH------------HHHHHHHHhc-------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccc
Confidence 599999985311 2223334332 257889997 79999999999999999 8
Q ss_pred cCCCeEEEEecceecccccCCcccccccc-CCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccc
Q 038881 121 KHPKVVSVFLNQGRKLHTTHSWEFLGLER-NGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGI 199 (794)
Q Consensus 121 ~~p~V~~v~~~~~~~~~~~~s~~~~gl~~-~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~ 199 (794)
++|+|++|++++.+++.... ++++. ..+..+..+|..+++|+||+|||||||||++||+|.+
T Consensus 97 ~~~~V~~v~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~------------- 159 (539)
T 3afg_A 97 QLSGVQFIQEDYVVKVAVET----EGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG------------- 159 (539)
T ss_dssp CCTTEEEEEECCEEECC---------------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT-------------
T ss_pred cCCCeeEEEecccccccCcc----ccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC-------------
Confidence 99999999999988765321 12211 1122356899999999999999999999999999964
Q ss_pred cccCCCccccccccccceeecccccccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceE
Q 038881 200 CENDKDAKFLCNRKLIGARYFNKGYAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARV 279 (794)
Q Consensus 200 ~~~g~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L 279 (794)
++++.++|.++ ...+.|++||||||||||+|.... ..+.+.||||+|+|
T Consensus 160 -------------~i~~~~d~~~~-----------~~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvAp~A~l 208 (539)
T 3afg_A 160 -------------KVIGWVDFVNG-----------KTTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMAPGAKL 208 (539)
T ss_dssp -------------TEEEEEETTTC-----------CSSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSCTTCEE
T ss_pred -------------CEeeeEECCCC-----------CCCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEECCCCEE
Confidence 35566677643 235678999999999999987421 12346899999999
Q ss_pred EEEEeecCCCCCCCCChHHHHHHHHHhHhC----CceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCC
Q 038881 280 AAYKVCWPPVTGNECYDADILAAFDMAIHD----GVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTD 355 (794)
Q Consensus 280 ~~~kv~~~~~~G~~~~~~~i~~ai~~a~~~----g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~ 355 (794)
+.+|++++. | .+..+++++||+||+++ |++|||||||........+.+..++.++.++|++||+||||+|+..
T Consensus 209 ~~~kv~~~~--g-~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~ 285 (539)
T 3afg_A 209 VGIKVLNGQ--G-SGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNK 285 (539)
T ss_dssp EEEECSCTT--S-EEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSS
T ss_pred EEEEeecCC--C-CcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCC
Confidence 999999876 4 47789999999999975 9999999999885445678899999999999999999999999865
Q ss_pred CCc--CCCCCceEEeccccCCCCccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCC
Q 038881 356 STV--SNIAPWQITVGASTMDRDFPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDP 433 (794)
Q Consensus 356 ~~~--~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~ 433 (794)
.++ +..++++|+|||++.+
T Consensus 286 ~~~~~Pa~~~~vitVgA~~~~----------------------------------------------------------- 306 (539)
T 3afg_A 286 YTVGSPAAASKVITVGAVDKY----------------------------------------------------------- 306 (539)
T ss_dssp SCCCTTTTCSSSEEEEEECTT-----------------------------------------------------------
T ss_pred CcccCCccCCceEEEeeecCC-----------------------------------------------------------
Confidence 443 4567999999985431
Q ss_pred CCccceEEEEecCCchhhhHHHHHHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEe
Q 038881 434 KKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTR 513 (794)
Q Consensus 434 ~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~ 513 (794)
T Consensus 307 -------------------------------------------------------------------------------- 306 (539)
T 3afg_A 307 -------------------------------------------------------------------------------- 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecCCCCCccccccCCCCCCCCCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHH
Q 038881 514 ATTELGLKPAPIMAAFSSKGPSSVAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVG 593 (794)
Q Consensus 514 ~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aA 593 (794)
+.+++||||||+. ++++||||+|||++|+++++...... ......|..++|||||||||||++|
T Consensus 307 ----------~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~sGTSmAaP~VAG~aA 370 (539)
T 3afg_A 307 ----------DVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAPGTAMATPHVAGIAA 370 (539)
T ss_dssp ----------SCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEECSHHHHHHHHHHHHH
T ss_pred ----------cccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCCC----CCCcccccccCchHHHHHHHHHHHH
Confidence 3788999999998 89999999999999999986532110 1112369999999999999999999
Q ss_pred HHHhhCCCCCHHHHHHHHHhcCccccCCCcccccCCCCCCCCCcccccccccccccCC
Q 038881 594 LLKTLHPEWSPAAIKSAIMTTASIQDNNKGQILNASSYKATPFSYGAGHIQPNLAMDP 651 (794)
Q Consensus 594 Ll~q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 651 (794)
||+|++|+|+|++||++|++||+++...+ .+++.||+|+||+.+|++.
T Consensus 371 Ll~~~~p~~s~~~vk~~L~~tA~~~~~~~----------~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 371 LLLQAHPSWTPDKVKTALIETADIVKPDE----------IADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp HHHHHCTTCCHHHHHHHHHHHSBCSSGGG----------CSBTTTBTCBCCHHHHHTG
T ss_pred HHHHHCCCCCHHHHHHHHHhhCccCCCCC----------CCccCccCCccCHHHHhhh
Confidence 99999999999999999999999874321 2467899999999999984
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.2e-58 Score=515.74 Aligned_cols=344 Identities=24% Similarity=0.344 Sum_probs=278.4
Q ss_pred ccEEEEeCCCCCCCCccccccccchHHHHHHHHHhcCCCCCCCcceEEEecceeeeEEEEeCHHHHHHHHcCCCeEEEEe
Q 038881 51 THHCCQKGAHSHGPELSAVDLHRVTESHYEFLGSFLHGNDNPEDAIFYSYTRHINGFAAKLDDAVAAEIAKHPKVVSVFL 130 (794)
Q Consensus 51 ~~YIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ng~s~~~~~~~i~~L~~~p~V~~v~~ 130 (794)
.+|||+||+.... .++++.. ..++.+.|. .+++|+++++++++++|+++|+|++|++
T Consensus 3 ~~~iV~~~~~~~~---------------~~~~~~~-------g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~ 59 (395)
T 2z2z_A 3 IRVIVSVDKAKFN---------------PHEVLGI-------GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEF 59 (395)
T ss_dssp EEEEEEECTTTCC---------------HHHHHHT-------TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEE
T ss_pred EEEEEEECCCccH---------------HHHHHHc-------CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEE
Confidence 5899999996422 1233332 357889998 5999999999999999999999999999
Q ss_pred cceecccccCC-----------ccccccccCCCccccccccccCCCCc--eEEEEecCCCCCCCCCCcCCCCCCCCCccc
Q 038881 131 NQGRKLHTTHS-----------WEFLGLERNGRVESNSIWKKARYGED--TIIGNLDTGVWPESKSFSDEGLGPIPSKWK 197 (794)
Q Consensus 131 ~~~~~~~~~~s-----------~~~~gl~~~~~~~~~~~~~~g~~G~G--V~VaVIDTGId~~Hp~f~~~g~~~~~~~~~ 197 (794)
++.++++.... ...|++..+. +..+|..+ +|+| |+|||||||||++||+|.++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~---~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~---------- 125 (395)
T 2z2z_A 60 DHQAVLLGKPSWLGGGSTQPAQTIPWGIERVK---APSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------- 125 (395)
T ss_dssp CCEEEECCEECC------CCSCCCCHHHHHTT---CGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG----------
T ss_pred eeeecccCCCCcccccccCccccCCcchhhcC---HHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc----------
Confidence 99887643221 1235555443 56899988 9999 99999999999999999743
Q ss_pred cccccCCCccccccccccceeecccccccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCc
Q 038881 198 GICENDKDAKFLCNRKLIGARYFNKGYAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKA 277 (794)
Q Consensus 198 g~~~~g~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A 277 (794)
+..+++|..+. ...+..+..|.+||||||||||+|.. ++..+.||||+|
T Consensus 126 ----------------~~~~~~~~~~~------~~~~~~~~~d~~gHGT~vAgiia~~~---------n~~g~~GvAp~a 174 (395)
T 2z2z_A 126 ----------------IAWCVSTLRGK------VSTKLRDCADQNGHGTHVIGTIAALN---------NDIGVVGVAPGV 174 (395)
T ss_dssp ----------------EEEEEECGGGC------CBCCHHHHBCSSSHHHHHHHHHHCCC---------SSSSCCCSSTTC
T ss_pred ----------------cccCccccCCc------ccCCCCCCCCCCCCHHHHHHHHHeec---------CCCceEEECCCC
Confidence 34444554331 00001124678999999999999873 122358999999
Q ss_pred eEEEEEeecCCCCCCCCChHHHHHHHHHhHhC--------------------CceEEEEccCCCCCCCCCCHHHHHHHHH
Q 038881 278 RVAAYKVCWPPVTGNECYDADILAAFDMAIHD--------------------GVDVLSVSLGGGPSKFFNDSTAIGSFHA 337 (794)
Q Consensus 278 ~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~~--------------------g~dVIN~SlG~~~~~~~~~~~~~a~~~a 337 (794)
+|+.+|++++. | .+..+++++||+||+++ +++|||||||... ....+..++.++
T Consensus 175 ~l~~~kv~~~~--g-~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a 248 (395)
T 2z2z_A 175 QIYSVRVLDAR--G-SGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQA 248 (395)
T ss_dssp EEEEEECSCTT--S-EEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHH
T ss_pred EEEEEEEecCC--C-CccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC---CCHHHHHHHHHH
Confidence 99999999876 4 46789999999999987 9999999999873 245677788889
Q ss_pred HhCCcEEEEecCCCCCCCCCcCCCCCceEEeccccCCCCccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcc
Q 038881 338 VKHGMVVICSAGNSGPTDSTVSNIAPWQITVGASTMDRDFPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAAN 417 (794)
Q Consensus 338 ~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~ 417 (794)
.++|++||+||||+|.....++...|++|+|||++.+
T Consensus 249 ~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------------------------- 285 (395)
T 2z2z_A 249 YNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN------------------------------------------- 285 (395)
T ss_dssp HHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT-------------------------------------------
T ss_pred HHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecCC-------------------------------------------
Confidence 9999999999999998877777888999999986432
Q ss_pred cchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHH
Q 038881 418 ASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADL 497 (794)
Q Consensus 418 ~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l 497 (794)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCcccee
Q 038881 498 FRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNA 577 (794)
Q Consensus 498 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~ 577 (794)
+.++.||+||| +|+|||++|+|+++. +.|..
T Consensus 286 --------------------------~~~a~fS~~G~----------~v~APG~~i~s~~~~-------------~~y~~ 316 (395)
T 2z2z_A 286 --------------------------DNIASFSNRQP----------EVSAPGVDILSTYPD-------------DSYET 316 (395)
T ss_dssp --------------------------SCBCTTSCSSC----------SEEEECSSEEEEETT-------------TEEEE
T ss_pred --------------------------CCCCcccCCCC----------CEEeCCCCeeeecCC-------------CceEe
Confidence 47789999997 689999999999976 48999
Q ss_pred eccccchhhHHHHHHHHHHhhCC-------------CCCHHHHHHHHHhcCccccCCCcccccCCCCCCCCCcccccccc
Q 038881 578 LSGTSMSCPHVSGIVGLLKTLHP-------------EWSPAAIKSAIMTTASIQDNNKGQILNASSYKATPFSYGAGHIQ 644 (794)
Q Consensus 578 ~sGTSmAaP~VAG~aALl~q~~p-------------~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn 644 (794)
++|||||||||||++|||+|++| .|++.+||++|++||+++... ..+..||||+||
T Consensus 317 ~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~-----------g~~~~~G~G~vd 385 (395)
T 2z2z_A 317 LMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT-----------GWDADYGYGVVR 385 (395)
T ss_dssp EESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCC
T ss_pred cCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCC-----------CCCCCccCceeC
Confidence 99999999999999999999999 999999999999999987432 236789999999
Q ss_pred cccccCC
Q 038881 645 PNLAMDP 651 (794)
Q Consensus 645 ~~~Al~~ 651 (794)
+.+|++.
T Consensus 386 ~~~A~~~ 392 (395)
T 2z2z_A 386 AALAVQA 392 (395)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999863
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=4e-55 Score=499.79 Aligned_cols=358 Identities=18% Similarity=0.213 Sum_probs=275.1
Q ss_pred CccEEEEeCCCCCCCCccccccccchHHHHHHHHHhcCCCCCCCcceEEEecceeeeEEEEeCHHHHHHHHc-CCCeEEE
Q 038881 50 QTHHCCQKGAHSHGPELSAVDLHRVTESHYEFLGSFLHGNDNPEDAIFYSYTRHINGFAAKLDDAVAAEIAK-HPKVVSV 128 (794)
Q Consensus 50 ~~~YIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ng~s~~~~~~~i~~L~~-~p~V~~v 128 (794)
.+.|||++++. ....++++.. +.++.+.|. .+++|+++++++++++|++ +|+|++|
T Consensus 44 ~~~yiv~~~~~---------------~~~~~~~~~~-------g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v 100 (471)
T 3t41_A 44 ELYYSVEYKNT---------------ATFNKLVKKK-------SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYI 100 (471)
T ss_dssp CEEEEEEESCH---------------HHHHHHHHHH-------TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEE
T ss_pred ceEEEEEcCCH---------------HHHHHHHHhC-------CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEE
Confidence 45799988773 2233344333 246778886 6999999999999999999 9999999
Q ss_pred EecceecccccCC----------ccccccccCCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCcccc
Q 038881 129 FLNQGRKLHTTHS----------WEFLGLERNGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKG 198 (794)
Q Consensus 129 ~~~~~~~~~~~~s----------~~~~gl~~~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g 198 (794)
++++.+++..... ...|++..+.. ...+|..+.+|+||+|||||||||++||+|.++- |.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~--~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~ 171 (471)
T 3t41_A 101 NATCSTCITSEKTIDRTSNESLFSRQWDMNKITN--NGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNF-------STD 171 (471)
T ss_dssp EECCSSCBCCCCCCCC---CCSCCCCHHHHTTTT--TTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTB-------CTT
T ss_pred EecceeccccccccccCCCCccccccccHhhccC--cHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCc-------ccC
Confidence 9998887654321 12345554431 1368999999999999999999999999998641 111
Q ss_pred ccccCCCccccccccccceeecccccccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCce
Q 038881 199 ICENDKDAKFLCNRKLIGARYFNKGYAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKAR 278 (794)
Q Consensus 199 ~~~~g~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~ 278 (794)
. ..++....|... ......+...+.|..||||||||||+|+. .+.||||+|+
T Consensus 172 ~------------~~~~~~~~~~~~----~~~~~~~~~~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~ 223 (471)
T 3t41_A 172 S------------KNLVPLNGFRGT----EPEETGDVHDVNDRKGHGTMVSGQTSANG------------KLIGVAPNNK 223 (471)
T ss_dssp C------------EECCCTTCGGGC----CTTCCCCTTCCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSC
T ss_pred C------------cccccCCCccCC----CcccCCCCCCCcCCCCccchhhheeecCC------------ceeEECCCCe
Confidence 0 001111111111 00111123356789999999999999863 2589999999
Q ss_pred EEEEEeecCCCCCCCCChHHHHHHHHHhHhCCceEEEEccCCCC-CC------------CCCCHHHHHHHHHHhCCcEEE
Q 038881 279 VAAYKVCWPPVTGNECYDADILAAFDMAIHDGVDVLSVSLGGGP-SK------------FFNDSTAIGSFHAVKHGMVVI 345 (794)
Q Consensus 279 L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~~g~dVIN~SlG~~~-~~------------~~~~~~~~a~~~a~~~Gv~vV 345 (794)
|+.+|++++. .+...++++||+++++++++|||||||... .. ...+.+..++..+.++|++||
T Consensus 224 l~~~kv~~~~----~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV 299 (471)
T 3t41_A 224 FTMYRVFGSK----KTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVV 299 (471)
T ss_dssp EEEEECCSSS----CCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEEeccCC----CCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEE
Confidence 9999999874 378999999999999999999999999841 00 122457788888999999999
Q ss_pred EecCCCCCCCCC------------------cCCCCCceEEeccccCCCCccceEEecCCeEEeeeecCCCCCCCCceece
Q 038881 346 CSAGNSGPTDST------------------VSNIAPWQITVGASTMDRDFPSYVVVSNNKRYKGQSLSSKGLPSNKLFPL 407 (794)
Q Consensus 346 ~AAGN~G~~~~~------------------~~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~pl 407 (794)
+||||+|..... .+..++++|+|||++.+
T Consensus 300 ~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~~--------------------------------- 346 (471)
T 3t41_A 300 AAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQK--------------------------------- 346 (471)
T ss_dssp EECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECTT---------------------------------
T ss_pred EEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCCC---------------------------------
Confidence 999999976542 45677899999986432
Q ss_pred EEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCceEEEEeccCCCCccccCCCCcccEE
Q 038881 408 ISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLANAQENGNELLADPHLLPAS 487 (794)
Q Consensus 408 v~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~ 487 (794)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCcccCceEeCCce---------------
Q 038881 488 HINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILKPDITAPGVT--------------- 552 (794)
Q Consensus 488 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~--------------- 552 (794)
+.+++||+|||+. |||+|||++
T Consensus 347 ------------------------------------~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~ 383 (471)
T 3t41_A 347 ------------------------------------SNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNE 383 (471)
T ss_dssp ------------------------------------SSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHT
T ss_pred ------------------------------------CCCCCccCCCCCC-------CeEEecCCCccccccccccccccc
Confidence 4688999999963 499999987
Q ss_pred -------EEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCC-CCCHHHHHHHHHhcCccccCCCcc
Q 038881 553 -------IIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHP-EWSPAAIKSAIMTTASIQDNNKGQ 624 (794)
Q Consensus 553 -------I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-~lsp~~ik~~L~~TA~~~~~~g~~ 624 (794)
|+++++. +.|..++|||||||||||++|||+|++| .++|++||++|++||.+...
T Consensus 384 ~~~~~~~i~s~~~~-------------~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~---- 446 (471)
T 3t41_A 384 GYMHKENILTTANN-------------GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN---- 446 (471)
T ss_dssp TTHHHHSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC----
T ss_pred ccccCceeEecCCC-------------CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC----
Confidence 8888866 4899999999999999999999999999 89999999999999987532
Q ss_pred cccCCCCCCCCCcccccccccccccCCC
Q 038881 625 ILNASSYKATPFSYGAGHIQPNLAMDPG 652 (794)
Q Consensus 625 ~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 652 (794)
.++..||||+||+.+|++..
T Consensus 447 --------~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 447 --------KPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp --------CCHHHHTTCBBCHHHHTTTT
T ss_pred --------CCcCccccChhCHHHHHHHH
Confidence 35678999999999999853
No 7
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=4.8e-55 Score=507.93 Aligned_cols=380 Identities=21% Similarity=0.211 Sum_probs=279.5
Q ss_pred cccCCccEEEEeCCCCCCCCccccccccchHHHHHHHHHhcCCCCCCCcceEEEecceeeeEEEEeCH----HHHHHHH-
Q 038881 46 FSMLQTHHCCQKGAHSHGPELSAVDLHRVTESHYEFLGSFLHGNDNPEDAIFYSYTRHINGFAAKLDD----AVAAEIA- 120 (794)
Q Consensus 46 ~~~~~~~YIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ng~s~~~~~----~~i~~L~- 120 (794)
...++++|||+||+.. ...++++.+ + .++.+.+. .+++++++++. +.+++|+
T Consensus 27 ~~~~~~~~IV~~k~~~---------------~~~~~~~~~-g------~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~ 83 (671)
T 1r6v_A 27 GEYTEGKILVGYNDRS---------------EVDKIVKAV-N------GKVVLELP-QIKVVSIKLNGMTVKQAYDKIKA 83 (671)
T ss_dssp TSBCTTEEEEEESSHH---------------HHHHHHHHH-T------CEEEEEEG-GGTEEEEECSSCCHHHHHHHHTT
T ss_pred CccCCccEEEEECCCc---------------CHHHHHHhc-C------CeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHh
Confidence 3578999999999842 112233332 1 45677776 78999999864 3456776
Q ss_pred -cCCCeEEEEecceecccc----c-----------------------CCccccccccCCCcccccc-ccccCCCCceEEE
Q 038881 121 -KHPKVVSVFLNQGRKLHT----T-----------------------HSWEFLGLERNGRVESNSI-WKKARYGEDTIIG 171 (794)
Q Consensus 121 -~~p~V~~v~~~~~~~~~~----~-----------------------~s~~~~gl~~~~~~~~~~~-~~~g~~G~GV~Va 171 (794)
++|+|++|||+..+++.. . .....|++..+. +..+ |+. ++|+||+||
T Consensus 84 ~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~---~~~a~w~~-~tG~gV~VA 159 (671)
T 1r6v_A 84 LALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIG---VTQQLWEE-ASGTNIIVA 159 (671)
T ss_dssp SCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTT---CCHHHHHH-CSCTTCEEE
T ss_pred ccCCCceEEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhccC---Cchhhhhc-cCCCCCEEE
Confidence 489999999997664431 0 001234554433 5566 888 899999999
Q ss_pred EecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccccccccCCCCCCCCCCCCCCCCCcceeec
Q 038881 172 NLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKGYAAAVGPLNSSFDTPRDKDGHGTHTLST 251 (794)
Q Consensus 172 VIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGi 251 (794)
|||||||++||+|.++ ++.++.+..+. ..+...+..|.+|||||||||
T Consensus 160 VIDTGVd~~HpdL~~~--------------------------~~~g~~~~~~~------~~p~~~d~~d~~gHGThVAGi 207 (671)
T 1r6v_A 160 VVDTGVDGTHPDLEGQ--------------------------VIAGYRPAFDE------ELPAGTDSSYGGSAGTHVAGT 207 (671)
T ss_dssp EEESCCBTTSGGGTTT--------------------------BCCEEEGGGTE------EECTTCBCCTTCSHHHHHHHH
T ss_pred EEeCCCCCCCcccccc--------------------------EEecccccCCC------cCCCCCCCccCCCcchhhhhh
Confidence 9999999999999754 11112211110 000012345678999999999
Q ss_pred ccccccccccccccCCCcccccCCCceEEEEEeecC----CCCCCCCChHHHHHHHHHhHhCCceEEEEccCCCCCCCCC
Q 038881 252 AGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWP----PVTGNECYDADILAAFDMAIHDGVDVLSVSLGGGPSKFFN 327 (794)
Q Consensus 252 iag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~----~~~G~~~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~ 327 (794)
|||.. ++..+.||||+|+|+.+|+++. ...| ....+.+++||+||+++|++|||||||+.. +.
T Consensus 208 IAa~~---------ng~gv~GVAP~A~I~~vkv~~~~~~~~g~g-~~s~~~i~~ai~~A~~~gadVIN~SlG~~~---~s 274 (671)
T 1r6v_A 208 IAAKK---------DGKGIVGVAPGAKIMPIVIFDDPALVGGNG-YVGDDYVAAGIIWATDHGAKVMNHSWGGWG---YS 274 (671)
T ss_dssp HHCCC---------SSSSCCCSCTTSEEEEEESBCCHHHHCTTS-BCCHHHHHHHHHHHHHTTCSEEEECEEBSC---CC
T ss_pred hhccC---------CCCceEEECCCCEEEEEEeccCccccCCCC-ccCHHHHHHHHHHHHHcCCCEEEeCCCCCC---CC
Confidence 99974 1233589999999999999986 1112 345678999999999999999999999862 34
Q ss_pred CHHHHHHHHHHhCCcEEEEecCCCCCCC-CCcCCCCCceEEeccccCCCCccceEEecCCeEEeeeecCCCCCCCCceec
Q 038881 328 DSTAIGSFHAVKHGMVVICSAGNSGPTD-STVSNIAPWQITVGASTMDRDFPSYVVVSNNKRYKGQSLSSKGLPSNKLFP 406 (794)
Q Consensus 328 ~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p 406 (794)
..+..++..|.++|++||+||||+|... ..++...|++|+|||++.+..
T Consensus 275 ~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~------------------------------ 324 (671)
T 1r6v_A 275 YTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG------------------------------ 324 (671)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT------------------------------
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC------------------------------
Confidence 5678888899999999999999999765 455667899999999643210
Q ss_pred eEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCceEEEEeccCCCCccccCCCCcccE
Q 038881 407 LISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLANAQENGNELLADPHLLPA 486 (794)
Q Consensus 407 lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~ 486 (794)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCcccCceEeCCceEEeeecCCCCCCC-
Q 038881 487 SHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILKPDITAPGVTIIAAYTEAAGPTN- 565 (794)
Q Consensus 487 ~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~- 565 (794)
...+++||++||.+ ||+|||++|+|+++.......
T Consensus 325 ------------------------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~ 360 (671)
T 1r6v_A 325 ------------------------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYE 360 (671)
T ss_dssp ------------------------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCC
T ss_pred ------------------------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccc
Confidence 01478999999987 999999999999876422110
Q ss_pred ----CCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccccCCCcccccCCCCCCCCCccccc
Q 038881 566 ----EDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQDNNKGQILNASSYKATPFSYGAG 641 (794)
Q Consensus 566 ----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G 641 (794)
.......+.|..++|||||||||||++|||+|++|+|+|.+||++|++||+++...+ .+..||||
T Consensus 361 ~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g-----------~d~~~G~G 429 (671)
T 1r6v_A 361 GHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG-----------WDHDTGYG 429 (671)
T ss_dssp CCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS-----------CBTTTBTC
T ss_pred cccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC-----------CCCCcccc
Confidence 001112357999999999999999999999999999999999999999999875332 35689999
Q ss_pred ccccccccCCCccccCCchhh
Q 038881 642 HIQPNLAMDPGLVYDLTENDY 662 (794)
Q Consensus 642 ~vn~~~Al~~~lv~~~~~~~~ 662 (794)
+||+.+|++..|..+....+|
T Consensus 430 ~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 430 LVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp BCCHHHHHHCCCCSSSEEEEE
T ss_pred eeCHHHHhhhhcCCCCCccce
Confidence 999999999887766544444
No 8
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1.6e-57 Score=524.86 Aligned_cols=375 Identities=19% Similarity=0.169 Sum_probs=62.1
Q ss_pred ccCCccEEEEeCCCCCCCCccccccccchHHHHHHHHHhcCCCCCCCcceEEEecceeeeEEEEeCHHHHHHHHcCCCeE
Q 038881 47 SMLQTHHCCQKGAHSHGPELSAVDLHRVTESHYEFLGSFLHGNDNPEDAIFYSYTRHINGFAAKLDDAVAAEIAKHPKVV 126 (794)
Q Consensus 47 ~~~~~~YIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ng~s~~~~~~~i~~L~~~p~V~ 126 (794)
..+|++|||+||++... ...+.+.+++...+.+. ....++.+.|++.|+||+++++++++++|+++|+|+
T Consensus 72 ~~ipg~YIV~lk~~~~~---------~~~~~~~~~l~a~~~~~-g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~ 141 (692)
T 2p4e_P 72 WRLPGTYVVVLKEETHL---------SQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVD 141 (692)
T ss_dssp GEEEEEEEEEECTTCCH---------HHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEE
T ss_pred ccCCCcEEEEECCCCCH---------HHHHHHHHHHHHHHhhc-ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCce
Confidence 47899999999997643 33344445554433211 123578999999999999999999999999999999
Q ss_pred EEEecceecccccCCccccccccCCCcc-ccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCC
Q 038881 127 SVFLNQGRKLHTTHSWEFLGLERNGRVE-SNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKD 205 (794)
Q Consensus 127 ~v~~~~~~~~~~~~s~~~~gl~~~~~~~-~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~ 205 (794)
+||+++.+..+ ... |++.++.... ....|..+.+|+||+|||||||||++||+|.++. .|.
T Consensus 142 ~Vepd~~v~~~-~~p---WgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~------~~~-------- 203 (692)
T 2p4e_P 142 YIEEDSSVFAQ-SIP---WNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV------MVT-------- 203 (692)
T ss_dssp EEEEEEEEEEC---------------------------------------------------------------------
T ss_pred EEEeccccccC-CCC---cchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCce------Eec--------
Confidence 99999987652 223 4665544321 2347888899999999999999999999998641 010
Q ss_pred ccccccccccceeecccccccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEee
Q 038881 206 AKFLCNRKLIGARYFNKGYAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVC 285 (794)
Q Consensus 206 ~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~ 285 (794)
.+.+..+. ++. .....+.|.+||||||||||+|+. .||||+|+|+++|++
T Consensus 204 -----------~~~~~~d~---dg~--~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl 253 (692)
T 2p4e_P 204 -----------DFENVPEE---DGT--RFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVL 253 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------ccccccCC---CCC--cccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEee
Confidence 00111000 000 001245689999999999999874 699999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHHhHhC------CceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCc-
Q 038881 286 WPPVTGNECYDADILAAFDMAIHD------GVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTV- 358 (794)
Q Consensus 286 ~~~~~G~~~~~~~i~~ai~~a~~~------g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~- 358 (794)
++. | .++.+++++||+|++++ +++|||||||+.. ...+..++.++.++|++||+||||+|.+....
T Consensus 254 ~~~--G-~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~s 326 (692)
T 2p4e_P 254 NCQ--G-KGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYS 326 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCC--C-CCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccC
Confidence 876 4 46888999999999986 8999999999863 34566667788999999999999999876544
Q ss_pred CCCCCceEEeccccCCCCccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccc
Q 038881 359 SNIAPWQITVGASTMDRDFPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKG 438 (794)
Q Consensus 359 ~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g 438 (794)
+...|++|+|||++.+...
T Consensus 327 PA~~~~vItVGA~d~~~~~------------------------------------------------------------- 345 (692)
T 2p4e_P 327 PASAPEVITVGATNAQDQP------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCEEEEEEEcCCCCc-------------------------------------------------------------
Confidence 4578999999997543200
Q ss_pred eEEEEecCCchhhhHHHHHHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeee
Q 038881 439 KILVCLRGDNARIDKGQQALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTEL 518 (794)
Q Consensus 439 kivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~ 518 (794)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCccccccCCCCCCCCCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhh
Q 038881 519 GLKPAPIMAAFSSKGPSSVAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTL 598 (794)
Q Consensus 519 ~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~ 598 (794)
...-+.||+|||.+ ||+|||++|+|+++... ..|..++|||||||||||++|||+|+
T Consensus 346 ----a~~ss~fSn~G~~v--------DI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls~ 402 (692)
T 2p4e_P 346 ----VTLGTLGTNFGRCV--------DLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSA 402 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----cccccccCCCCCce--------eEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHHH
Confidence 00112389999854 99999999999987631 37899999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCccccCCCccccc-----CCC----CCCCCCcccccc--cccccccC
Q 038881 599 HPEWSPAAIKSAIMTTASIQDNNKGQILN-----ASS----YKATPFSYGAGH--IQPNLAMD 650 (794)
Q Consensus 599 ~p~lsp~~ik~~L~~TA~~~~~~g~~~~~-----~~~----~~~~~~~~G~G~--vn~~~Al~ 650 (794)
+|+|+|++||++|++||.+..-...++.. ..+ .+.....+|+|+ .++..+..
T Consensus 403 ~P~ltp~qVk~~L~~tA~~~~~~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~~~s 465 (692)
T 2p4e_P 403 EPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 465 (692)
T ss_dssp ---------------------------------------------------------------
T ss_pred CCCCCHHHHHHHHHHhccccccCCCCCccccCCCCcceeecCCCccccCCCCccccccccccC
Confidence 99999999999999999764322111100 001 011345578888 77776654
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=2.9e-55 Score=495.57 Aligned_cols=391 Identities=21% Similarity=0.293 Sum_probs=282.1
Q ss_pred ccccccCCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccc
Q 038881 144 FLGLERNGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKG 223 (794)
Q Consensus 144 ~~gl~~~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~ 223 (794)
.|+++++. +..+|..+ |+||+|||||||||++||+|.++ ++..+++...
T Consensus 5 ~W~l~~i~---~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~--------------------------~~~~~~~~~~ 53 (441)
T 1y9z_A 5 PWGQTFVG---ATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN--------------------------NVTGTNNSGT 53 (441)
T ss_dssp CHHHHHTT---CSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS--------------------------EEEECCCTTS
T ss_pred CCChhhcC---hhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC--------------------------cccCcccCCC
Confidence 35666554 56889864 77999999999999999999753 1111122110
Q ss_pred cccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCc--eEEEEEeecCCCCCCCCChHHHHH
Q 038881 224 YAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKA--RVAAYKVCWPPVTGNECYDADILA 301 (794)
Q Consensus 224 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A--~L~~~kv~~~~~~G~~~~~~~i~~ 301 (794)
.+...+.|..||||||||||++... +..+.||||+| +|+.+|+++.. | .+..+++++
T Consensus 54 ---------~~~~~~~d~~gHGT~vAgiia~~~~---------~~g~~GvAP~a~~~l~~~kv~~~~--g-~~~~~~~~~ 112 (441)
T 1y9z_A 54 ---------GNWYQPGNNNAHGTHVAGTIAAIAN---------NEGVVGVMPNQNANIHIVKVFNEA--G-WGYSSSLVA 112 (441)
T ss_dssp ---------CCTTCCCSSCCHHHHHHHHHHCCCS---------SSBCCCSSCSSCSEEEEEECEETT--E-ECCSSCHHH
T ss_pred ---------CCCCCCCCCCCcHHHHHHHHhcccC---------CCCceEecCCCCCEEEEEEEeCCC--C-CcCHHHHHH
Confidence 0123466889999999999999751 22358999995 99999999876 3 467889999
Q ss_pred HHHHhHhC-CceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEeccccCCCCccce
Q 038881 302 AFDMAIHD-GVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTVSNIAPWQITVGASTMDRDFPSY 380 (794)
Q Consensus 302 ai~~a~~~-g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~ 380 (794)
||+||+++ |++|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+.....+
T Consensus 113 ai~~a~~~~g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~ 189 (441)
T 1y9z_A 113 AIDTCVNSGGANVVTMSLGGSG---STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAF 189 (441)
T ss_dssp HHHHHHHTTCCSEEEECCCBSC---CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTT
T ss_pred HHHHHHHhcCCcEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCcc
Confidence 99999999 9999999999873 2345677888899999999999999998877778888999999999887654333
Q ss_pred EEecCCe-----------------------EEeeeecCCCCC-CCCceec--eEEccchhhcccchhhccccCCC--CCC
Q 038881 381 VVVSNNK-----------------------RYKGQSLSSKGL-PSNKLFP--LISAADAKAANASTEVALLCEAG--TLD 432 (794)
Q Consensus 381 ~~~~~~~-----------------------~~~g~~~~~~~~-~~~~~~p--lv~~~~~~~~~~~~~~~~~c~~~--~~~ 432 (794)
...+... .+.|.+++.... +....++ +.+..... ..........|... .++
T Consensus 190 S~~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~-~g~~~~~~~~C~~~~~~~~ 268 (441)
T 1y9z_A 190 SQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPI-NASATGALAECTVNGTSFS 268 (441)
T ss_dssp SCCCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCC-CCEEEEEEEEEEEETTEEE
T ss_pred ccCCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCcccccccc-ccccccchhcccccccccc
Confidence 2222211 122222221100 0000000 11111100 00001123457654 567
Q ss_pred CCCccceEEEEecCCc-----hhhhHHHHHHHcCceEEEEeccCCCCcc------ccCCCCcccEEEEeccchHHHHHHH
Q 038881 433 PKKVKGKILVCLRGDN-----ARIDKGQQALLAGAVGMVLANAQENGNE------LLADPHLLPASHINFTDGADLFRDV 501 (794)
Q Consensus 433 ~~~~~gkivl~~~g~~-----~~~~~~~~~~~~Ga~gvi~~n~~~~~~~------~~~~~~~~p~~~i~~~~g~~l~~~~ 501 (794)
..+++|||++|+|+.| .+.+|..+++++|+.++|++|+...... .......+|.++++..+|+.|++++
T Consensus 269 ~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~ 348 (441)
T 1y9z_A 269 CGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKL 348 (441)
T ss_dssp CCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTT
T ss_pred CCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHh
Confidence 8899999999999876 7889999999999999999998642111 1223467999999999999999877
Q ss_pred hcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccc
Q 038881 502 NSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGT 581 (794)
Q Consensus 502 ~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGT 581 (794)
.+. . .+ ++... +.|..+|||
T Consensus 349 ~~~----~-----------------------------------t~--------~~~~~-------------~~y~~~sGT 368 (441)
T 1y9z_A 349 GQS----T-----------------------------------TV--------SNQGN-------------QDYEYYNGT 368 (441)
T ss_dssp TSE----E-----------------------------------EE--------EEEEE-------------ESEEEECSH
T ss_pred cCC----c-----------------------------------cc--------ccccC-------------CCceeeccc
Confidence 431 1 01 11111 389999999
Q ss_pred cchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccccCCCcccccCCCCCCCCCcccccccccccccCCCccccCCchh
Q 038881 582 SMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQDNNKGQILNASSYKATPFSYGAGHIQPNLAMDPGLVYDLTEND 661 (794)
Q Consensus 582 SmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~ 661 (794)
|||||||||++|||+|+||+|+|++||++||+||++++..+ ++.+||+|+||+.+|+ |
T Consensus 369 SmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g-----------~~~~~G~G~vn~~~A~-----------~ 426 (441)
T 1y9z_A 369 SMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAK-----------A 426 (441)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS-----------CBTTTBTCBCCHHHHH-----------H
T ss_pred ccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC-----------CcccccccccCHHHHH-----------H
Confidence 99999999999999999999999999999999999886543 3567999999999996 5
Q ss_pred hhhhhhcCCCC
Q 038881 662 YLNFLCALGYN 672 (794)
Q Consensus 662 ~~~~~~~~~~~ 672 (794)
|+.|||++++.
T Consensus 427 ~~~~lc~~~~~ 437 (441)
T 1y9z_A 427 YLDESCTGPTD 437 (441)
T ss_dssp HHHHCTTCC--
T ss_pred HHHhhhcCCCC
Confidence 99999998854
No 10
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.5e-52 Score=441.98 Aligned_cols=265 Identities=28% Similarity=0.418 Sum_probs=224.8
Q ss_pred ccccccCCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccc
Q 038881 144 FLGLERNGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKG 223 (794)
Q Consensus 144 ~~gl~~~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~ 223 (794)
.|++..+. +..+|..+++|+||+|+|||||| .+||+|+ +...++|..+
T Consensus 5 ~W~l~~i~---~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~----------------------------~~~~~~~~~~ 52 (269)
T 1gci_A 5 PWGISRVQ---APAAHNRGLTGSGVKVAVLDTGI-STHPDLN----------------------------IRGGASFVPG 52 (269)
T ss_dssp CHHHHHTT---HHHHHHTTCSCTTCEEEEEESCC-CCCTTCC----------------------------EEEEEECSTT
T ss_pred CcChhhcC---cHHHHhcCCCCCCCEEEEECCCC-CCCHhhc----------------------------ccCCcccCCC
Confidence 35665544 67899999999999999999999 8999994 2233455432
Q ss_pred cccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHH
Q 038881 224 YAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAF 303 (794)
Q Consensus 224 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai 303 (794)
.....|..||||||||||+|.. +...+.||||+|+|+.+|+++.. | .+..+++++||
T Consensus 53 -----------~~~~~d~~gHGT~vAgiia~~~---------~~~~~~GvAp~a~l~~~~v~~~~--g-~~~~~~~~~ai 109 (269)
T 1gci_A 53 -----------EPSTQDGNGHGTHVAGTIAALN---------NSIGVLGVAPSAELYAVKVLGAS--G-SGSVSSIAQGL 109 (269)
T ss_dssp -----------CCSCSCSSSHHHHHHHHHHCCC---------SSSBCCCSSTTCEEEEEECBCTT--S-CBCHHHHHHHH
T ss_pred -----------CCCCCCCCCChHHHHHHHhcCc---------CCCCcEEeCCCCEEEEEEeECCC--C-CcCHHHHHHHH
Confidence 2235688999999999999863 12235899999999999999876 3 46889999999
Q ss_pred HHhHhCCceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEeccccCCCCccceEEe
Q 038881 304 DMAIHDGVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTVSNIAPWQITVGASTMDRDFPSYVVV 383 (794)
Q Consensus 304 ~~a~~~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~ 383 (794)
+|+++++++|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 110 ~~a~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~--------- 177 (269)
T 1gci_A 110 EWAGNNGMHVANLSLGSPS---PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN--------- 177 (269)
T ss_dssp HHHHHTTCSEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT---------
T ss_pred HHHHHCCCeEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC---------
Confidence 9999999999999999873 2456778888999999999999999998877777788999999986432
Q ss_pred cCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCce
Q 038881 384 SNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAV 463 (794)
Q Consensus 384 ~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~ 463 (794)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCccc
Q 038881 464 GMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILK 543 (794)
Q Consensus 464 gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~K 543 (794)
+.++.||++||.+
T Consensus 178 ------------------------------------------------------------~~~~~~S~~G~~~------- 190 (269)
T 1gci_A 178 ------------------------------------------------------------NNRASFSQYGAGL------- 190 (269)
T ss_dssp ------------------------------------------------------------SCBCTTCCCSTTE-------
T ss_pred ------------------------------------------------------------CCCCCCCCCCCCc-------
Confidence 3678999999976
Q ss_pred CceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccccCCCc
Q 038881 544 PDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQDNNKG 623 (794)
Q Consensus 544 PDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~ 623 (794)
||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 191 -di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g---- 252 (269)
T 1gci_A 191 -DIVAPGVNVQSTYPG-------------STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG---- 252 (269)
T ss_dssp -EEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS----
T ss_pred -ceEecCCCeEeecCC-------------CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC----
Confidence 999999999999876 47999999999999999999999999999999999999999999862
Q ss_pred ccccCCCCCCCCCcccccccccccccC
Q 038881 624 QILNASSYKATPFSYGAGHIQPNLAMD 650 (794)
Q Consensus 624 ~~~~~~~~~~~~~~~G~G~vn~~~Al~ 650 (794)
++..||+|+||+.+|++
T Consensus 253 ----------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 ----------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp ----------CHHHHTTCBCCHHHHTC
T ss_pred ----------CCCCcccCccCHHHHcC
Confidence 35689999999999985
No 11
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1e-52 Score=444.90 Aligned_cols=265 Identities=28% Similarity=0.430 Sum_probs=222.4
Q ss_pred cccccCCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeeccccc
Q 038881 145 LGLERNGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKGY 224 (794)
Q Consensus 145 ~gl~~~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~~ 224 (794)
|+++.+. +..+|..+++|+||+|+|||||||++||+|+ +..+++|..+
T Consensus 6 w~l~~i~---~~~~~~~g~~G~gv~VaViDtGid~~h~~l~----------------------------~~~g~~~~~~- 53 (274)
T 1r0r_E 6 YGIPLIK---ADKVQAQGFKGANVKVAVLDTGIQASHPDLN----------------------------VVGGASFVAG- 53 (274)
T ss_dssp THHHHTT---HHHHHHHTCSCTTCEEEEEESCCCTTCTTCC----------------------------EEEEEECSTT-
T ss_pred CchhhcC---CHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc----------------------------CCCCccccCC-
Confidence 4655543 6789999999999999999999999999994 2233445432
Q ss_pred ccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHHH
Q 038881 225 AAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAFD 304 (794)
Q Consensus 225 ~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~ 304 (794)
.....|..||||||||||++.. +...+.||||+|+|+.+|+++.. | .+..+++++||+
T Consensus 54 ----------~~~~~d~~gHGT~vAgiia~~~---------~~~g~~GvAp~a~l~~~~v~~~~--g-~~~~~~i~~ai~ 111 (274)
T 1r0r_E 54 ----------EAYNTDGNGHGTHVAGTVAALD---------NTTGVLGVAPSVSLYAVKVLNSS--G-SGSYSGIVSGIE 111 (274)
T ss_dssp ----------CCTTCCSSSHHHHHHHHHHCCS---------SSSBCCCSSTTSEEEEEECSCTT--S-EECHHHHHHHHH
T ss_pred ----------CCCCCCCCCCHHHHHHHHHccC---------CCCceEEECCCCEEEEEEEECCC--C-CccHHHHHHHHH
Confidence 1235678999999999999863 12335899999999999999876 3 468889999999
Q ss_pred HhHhCCceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCC----CCcCCCCCceEEeccccCCCCccce
Q 038881 305 MAIHDGVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTD----STVSNIAPWQITVGASTMDRDFPSY 380 (794)
Q Consensus 305 ~a~~~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~----~~~~~~ap~vitVgAs~~~~~~~~~ 380 (794)
|+++++++|||||||... ....+..++.++.++|++||+||||+|... ..++...+++|+|||++.+
T Consensus 112 ~a~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~------ 182 (274)
T 1r0r_E 112 WATTNGMDVINMSLGGAS---GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN------ 182 (274)
T ss_dssp HHHHTTCSEEEECEEBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT------
T ss_pred HHHHcCCCEEEeCCCCCC---CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC------
Confidence 999999999999999873 245678888899999999999999999763 3345567899999986432
Q ss_pred EEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHc
Q 038881 381 VVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLA 460 (794)
Q Consensus 381 ~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~ 460 (794)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCC
Q 038881 461 GAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPE 540 (794)
Q Consensus 461 Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~ 540 (794)
+.++.||++||.+
T Consensus 183 ---------------------------------------------------------------~~~~~~S~~G~~~---- 195 (274)
T 1r0r_E 183 ---------------------------------------------------------------SNRASFSSVGAEL---- 195 (274)
T ss_dssp ---------------------------------------------------------------SCBCTTCCCSTTE----
T ss_pred ---------------------------------------------------------------CCcCccCCCCCCc----
Confidence 3678999999865
Q ss_pred cccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccccC
Q 038881 541 ILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQDN 620 (794)
Q Consensus 541 ~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~ 620 (794)
||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 196 ----di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g- 257 (274)
T 1r0r_E 196 ----EVMAPGAGVYSTYPT-------------NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG- 257 (274)
T ss_dssp ----EEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS-
T ss_pred ----eEEeCCCCeEeecCC-------------CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC-
Confidence 999999999999876 47999999999999999999999999999999999999999999862
Q ss_pred CCcccccCCCCCCCCCcccccccccccccC
Q 038881 621 NKGQILNASSYKATPFSYGAGHIQPNLAMD 650 (794)
Q Consensus 621 ~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 650 (794)
++..||+|+||+.+|++
T Consensus 258 -------------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 -------------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp -------------CHHHHTTCBCCHHHHTC
T ss_pred -------------CCCCcccCccCHHHHhC
Confidence 35689999999999985
No 12
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=5.8e-52 Score=440.32 Aligned_cols=268 Identities=27% Similarity=0.331 Sum_probs=219.1
Q ss_pred ccccccCCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccc
Q 038881 144 FLGLERNGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKG 223 (794)
Q Consensus 144 ~~gl~~~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~ 223 (794)
+|++..+. +..+|+.+..|+||+|||||||||++||+|.++ ++..++|.++
T Consensus 12 ~w~l~~i~---~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~--------------------------~~~~~~~~~~ 62 (280)
T 1dbi_A 12 QYGPQNTY---TDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK--------------------------VIKGYDFVDN 62 (280)
T ss_dssp CCTTGGGT---HHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT--------------------------EEEEEETTTT
T ss_pred CCChhhcC---cHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC--------------------------cccceeccCC
Confidence 45665543 678999988888999999999999999999743 4455566543
Q ss_pred cccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHH
Q 038881 224 YAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAF 303 (794)
Q Consensus 224 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai 303 (794)
..++.|..||||||||||+|...+ ...+.||||+|+|+.+|+++.+ | .+..+++++||
T Consensus 63 -----------~~~~~d~~gHGT~vAgiia~~~~~--------~~g~~GvAp~a~l~~~kv~~~~--g-~~~~~~i~~ai 120 (280)
T 1dbi_A 63 -----------DYDPMDLNNHGTHVAGIAAAETNN--------ATGIAGMAPNTRILAVRALDRN--G-SGTLSDIADAI 120 (280)
T ss_dssp -----------BSCCCCSSSHHHHHHHHHHCCCSS--------SSSCCCSSSSCEEEEEECCCTT--S-CCCHHHHHHHH
T ss_pred -----------CCCCCCCCCcHHHHHHHHhCcCCC--------CCcceEeCCCCEEEEEEEECCC--C-CcCHHHHHHHH
Confidence 234578899999999999987521 2235899999999999999876 4 47889999999
Q ss_pred HHhHhCCceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEeccccCCCCccceEEe
Q 038881 304 DMAIHDGVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTVSNIAPWQITVGASTMDRDFPSYVVV 383 (794)
Q Consensus 304 ~~a~~~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~ 383 (794)
+|+++++++|||||||... ....+..++.++.++|++||+||||+|......+...+++|+|||++.+
T Consensus 121 ~~a~~~g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--------- 188 (280)
T 1dbi_A 121 IYAADSGAEVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY--------- 188 (280)
T ss_dssp HHHHHTTCSEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT---------
T ss_pred HHHHHCCCCEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC---------
Confidence 9999999999999999862 3456788888999999999999999998766677788999999986432
Q ss_pred cCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCce
Q 038881 384 SNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAV 463 (794)
Q Consensus 384 ~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~ 463 (794)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCccc
Q 038881 464 GMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILK 543 (794)
Q Consensus 464 gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~K 543 (794)
+.++.||++||.+
T Consensus 189 ------------------------------------------------------------~~~~~~S~~G~~~------- 201 (280)
T 1dbi_A 189 ------------------------------------------------------------DRLASFSNYGTWV------- 201 (280)
T ss_dssp ------------------------------------------------------------SCBCTTBCCSTTC-------
T ss_pred ------------------------------------------------------------CCcCCCCCCCCCc-------
Confidence 3678999999876
Q ss_pred CceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccccCCCc
Q 038881 544 PDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQDNNKG 623 (794)
Q Consensus 544 PDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~ 623 (794)
||+|||++|+++++. +.|..++|||||||||||++|||++ |.+++.+||++|++||+++...
T Consensus 202 -dv~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~-- 263 (280)
T 1dbi_A 202 -DVVAPGVDIVSTITG-------------NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT-- 263 (280)
T ss_dssp -CEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB--
T ss_pred -eEEEecCCeEeecCC-------------CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC--
Confidence 999999999999875 4899999999999999999999987 8999999999999999987421
Q ss_pred ccccCCCCCCCCCcccccccccccccC
Q 038881 624 QILNASSYKATPFSYGAGHIQPNLAMD 650 (794)
Q Consensus 624 ~~~~~~~~~~~~~~~G~G~vn~~~Al~ 650 (794)
...||+|+||+.+|++
T Consensus 264 -----------~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 264 -----------GTYFKYGRINSYNAVT 279 (280)
T ss_dssp -----------TTTBSSEECCHHHHHT
T ss_pred -----------CCcccCCEECHHHHhc
Confidence 3579999999999986
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=4e-52 Score=441.74 Aligned_cols=268 Identities=28% Similarity=0.409 Sum_probs=223.4
Q ss_pred ccccccCCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccc
Q 038881 144 FLGLERNGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKG 223 (794)
Q Consensus 144 ~~gl~~~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~ 223 (794)
.|+++.+. +..+|..+++|+||+|||||||||++||+|+. ..+++|..+
T Consensus 5 ~w~l~~i~---~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~----------------------------~~g~~~~~~ 53 (281)
T 1to2_E 5 PYGVSQIK---APALHSQGYTGSNVKVAVIDSGIDSSHPDLKV----------------------------AGGASMVPS 53 (281)
T ss_dssp CHHHHHTT---HHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE----------------------------EEEEECCTT
T ss_pred CcchhhcC---hHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC----------------------------cCCccccCC
Confidence 35665544 67899999999999999999999999999942 223344332
Q ss_pred cccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHH
Q 038881 224 YAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAF 303 (794)
Q Consensus 224 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai 303 (794)
+.....|..||||||||||+|.. +...+.||||+|+|+.+|+++.+ | .+..++++++|
T Consensus 54 ----------~~~~~~d~~gHGT~vAgiia~~~---------~~~g~~GvAp~a~l~~~kv~~~~--g-~~~~~~i~~ai 111 (281)
T 1to2_E 54 ----------ETNPFQDNNSHGTHVAGTVAALN---------NSIGVLGVAPSASLYAVKVLGAD--G-SGQYSWIINGI 111 (281)
T ss_dssp ----------CCCTTCCSSSHHHHHHHHHHCCS---------SSSSBCCSSTTSEEEEEECSCTT--S-EECHHHHHHHH
T ss_pred ----------CCCCCCCCCCcHHHHHHHHhccC---------CCCcceeeCCCCEEEEEEEeCCC--C-CccHHHHHHHH
Confidence 01123678999999999999863 12335899999999999999876 3 46789999999
Q ss_pred HHhHhCCceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCC----CCcCCCCCceEEeccccCCCCccc
Q 038881 304 DMAIHDGVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTD----STVSNIAPWQITVGASTMDRDFPS 379 (794)
Q Consensus 304 ~~a~~~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~----~~~~~~ap~vitVgAs~~~~~~~~ 379 (794)
+|+++++++|||||||... ....+..++.++.++|++||+||||+|... ..++...|++|+|||++.+
T Consensus 112 ~~a~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~----- 183 (281)
T 1to2_E 112 EWAIANNMDVINMSLGGPS---GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS----- 183 (281)
T ss_dssp HHHHHTTCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT-----
T ss_pred HHHHHCCCcEEEECCcCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC-----
Confidence 9999999999999999873 245688888899999999999999999763 3345567899999986431
Q ss_pred eEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHH
Q 038881 380 YVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALL 459 (794)
Q Consensus 380 ~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~ 459 (794)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCC
Q 038881 460 AGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAP 539 (794)
Q Consensus 460 ~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~ 539 (794)
+.++.||++||.+
T Consensus 184 ----------------------------------------------------------------~~~~~fS~~G~~~--- 196 (281)
T 1to2_E 184 ----------------------------------------------------------------NQRASFSSVGPEL--- 196 (281)
T ss_dssp ----------------------------------------------------------------SCBCTTCCCSTTC---
T ss_pred ----------------------------------------------------------------CCcCCcCCCCCCc---
Confidence 4678999999976
Q ss_pred CcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCcccc
Q 038881 540 EILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQD 619 (794)
Q Consensus 540 ~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~ 619 (794)
||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|+++|||++|++||+++.
T Consensus 197 -----di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g 258 (281)
T 1to2_E 197 -----DVMAPGVSIQSTLPG-------------NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG 258 (281)
T ss_dssp -----CEEEECSSEEEEETT-------------TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS
T ss_pred -----eEEecCCCeEeecCC-------------CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC
Confidence 999999999999876 47999999999999999999999999999999999999999998862
Q ss_pred CCCcccccCCCCCCCCCcccccccccccccCC
Q 038881 620 NNKGQILNASSYKATPFSYGAGHIQPNLAMDP 651 (794)
Q Consensus 620 ~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 651 (794)
+++.||||+||+.+|++.
T Consensus 259 --------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 --------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp --------------CHHHHTTCBCCHHHHTSS
T ss_pred --------------CCCCcccceecHHHHhhh
Confidence 356899999999999985
No 14
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=2.7e-52 Score=452.50 Aligned_cols=274 Identities=27% Similarity=0.390 Sum_probs=223.1
Q ss_pred cccccccCCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeeccc
Q 038881 143 EFLGLERNGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNK 222 (794)
Q Consensus 143 ~~~gl~~~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~ 222 (794)
..|+++.+. +..+|..+++|+||+|||||||||++||+|.++ ++.+++|..
T Consensus 21 ~~w~l~~i~---~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~--------------------------~~~~~~~~~ 71 (327)
T 2x8j_A 21 VPMGVEIVE---APAVWRASAKGAGQIIGVIDTGCQVDHPDLAER--------------------------IIGGVNLTT 71 (327)
T ss_dssp CCHHHHHTT---HHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG--------------------------EEEEEECSS
T ss_pred cCcchhhcC---hHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc--------------------------ccCCccccC
Confidence 345666554 678999999999999999999999999999742 455566665
Q ss_pred cc-ccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHH
Q 038881 223 GY-AAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILA 301 (794)
Q Consensus 223 ~~-~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ 301 (794)
++ .. .....|..||||||||||+|.. .+..+.||||+|+|+.+|+++.. | .+..+++++
T Consensus 72 ~~~~~--------~~~~~d~~gHGT~VAgiia~~~---------~~~g~~GvAp~a~l~~~kv~~~~--g-~~~~~~i~~ 131 (327)
T 2x8j_A 72 DYGGD--------ETNFSDNNGHGTHVAGTVAAAE---------TGSGVVGVAPKADLFIIKALSGD--G-SGEMGWIAK 131 (327)
T ss_dssp GGGGC--------TTCCCCSSSHHHHHHHHHHCCC---------CSSBCCCSSTTCEEEEEECSCTT--S-EECHHHHHH
T ss_pred CCCCC--------CCCCCCCCCchHHHHHHHhccC---------CCCCcEeeCCCCEEEEEEeECCC--C-CcCHHHHHH
Confidence 43 11 2235688999999999999974 12335899999999999999876 3 467899999
Q ss_pred HHHHhHh------CCceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCC-----CCcCCCCCceEEecc
Q 038881 302 AFDMAIH------DGVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTD-----STVSNIAPWQITVGA 370 (794)
Q Consensus 302 ai~~a~~------~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-----~~~~~~ap~vitVgA 370 (794)
||+||++ .+++|||||||... ....+..++..+.++|++||+||||+|... ..++...+++|+|||
T Consensus 132 ai~~a~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga 208 (327)
T 2x8j_A 132 AIRYAVDWRGPKGEQMRIITMSLGGPT---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGA 208 (327)
T ss_dssp HHHHHHHCCCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEE
T ss_pred HHHHHHhhcccccCCceEEEECCCcCC---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEE
Confidence 9999999 89999999999873 245677888899999999999999999752 344557799999998
Q ss_pred ccCCCCccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchh
Q 038881 371 STMDRDFPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNAR 450 (794)
Q Consensus 371 s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~ 450 (794)
++.+
T Consensus 209 ~~~~---------------------------------------------------------------------------- 212 (327)
T 2x8j_A 209 VDFD---------------------------------------------------------------------------- 212 (327)
T ss_dssp ECTT----------------------------------------------------------------------------
T ss_pred ECCC----------------------------------------------------------------------------
Confidence 6432
Q ss_pred hhHHHHHHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCcccccc
Q 038881 451 IDKGQQALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFS 530 (794)
Q Consensus 451 ~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fS 530 (794)
+.++.||
T Consensus 213 -------------------------------------------------------------------------~~~~~fS 219 (327)
T 2x8j_A 213 -------------------------------------------------------------------------LRLSDFT 219 (327)
T ss_dssp -------------------------------------------------------------------------CCBSCC-
T ss_pred -------------------------------------------------------------------------CCCCCcc
Confidence 4678999
Q ss_pred CCCCCCCCCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhh-----CCCCCHH
Q 038881 531 SKGPSSVAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTL-----HPEWSPA 605 (794)
Q Consensus 531 S~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~p~lsp~ 605 (794)
++||.+ ||+|||++|+++++. +.|..++|||||||||||++|||+|+ +|.|++.
T Consensus 220 ~~G~~~--------di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~ 278 (327)
T 2x8j_A 220 NTNEEI--------DIVAPGVGIKSTYLD-------------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSET 278 (327)
T ss_dssp --CCCC--------SEEEECSSEEEECST-------------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHH
T ss_pred CCCCCc--------eEecCcCceEeecCC-------------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHH
Confidence 999865 999999999999875 47999999999999999999999999 9999999
Q ss_pred HHHHHHHhcCccccCCCcccccCCCCCCCCCcccccccccccccCC
Q 038881 606 AIKSAIMTTASIQDNNKGQILNASSYKATPFSYGAGHIQPNLAMDP 651 (794)
Q Consensus 606 ~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 651 (794)
+||++|++||+++. .++..+|+|+||+.+|++.
T Consensus 279 ~v~~~L~~tA~~~g-------------~~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 279 EIYAQLVRRATPIG-------------FTAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp HHHHHHHTTEECCS-------------SCHHHHTTCEECTTHHHHH
T ss_pred HHHHHHHHhCccCC-------------CCCCceeeeEECHHHHHHh
Confidence 99999999999862 2467899999999999973
No 15
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=3.2e-53 Score=465.51 Aligned_cols=306 Identities=18% Similarity=0.192 Sum_probs=200.7
Q ss_pred cccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCcccccccccc----ceeecccccccccCCC
Q 038881 156 NSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLI----GARYFNKGYAAAVGPL 231 (794)
Q Consensus 156 ~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~----g~~~~~~~~~~~~~~~ 231 (794)
..+|..+..|+||+|||||||||++||+|++....+....|...++.........+..+. ..+.+.... ...
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 96 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEAL----EAV 96 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHH----HHH
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCcccccccccccc----ccc
Confidence 489999999999999999999999999999876666667777655433210000000000 000000000 000
Q ss_pred CCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCC--CCCCChHHHHHHHHHhHhC
Q 038881 232 NSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVT--GNECYDADILAAFDMAIHD 309 (794)
Q Consensus 232 ~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~--G~~~~~~~i~~ai~~a~~~ 309 (794)
.++..++.|.+||||||||||+|+. ++.+.||||+|+|+.+|++..... ...+...++++||+++++.
T Consensus 97 ~~~~~~~~D~~gHGThVAGiiag~~----------~~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~ 166 (357)
T 4h6x_A 97 IPDTKDRIVLNDHACHVTSTIVGQE----------HSPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALEL 166 (357)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCT----------TSSCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHT
T ss_pred cCCCCCCcCCCCcHHHHHHHHhccC----------CCCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHc
Confidence 0112234567899999999999974 224589999999999999754310 0024556789999999999
Q ss_pred CceEEEEccCCCC-CCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEeccccCCCCccceEEecCCeE
Q 038881 310 GVDVLSVSLGGGP-SKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTVSNIAPWQITVGASTMDRDFPSYVVVSNNKR 388 (794)
Q Consensus 310 g~dVIN~SlG~~~-~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~~~ 388 (794)
|++|||||||... .....+.+..++.++.++|++||+||||+|.....++...|++|+|||++.+
T Consensus 167 g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------- 232 (357)
T 4h6x_A 167 GANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD-------------- 232 (357)
T ss_dssp TCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT--------------
T ss_pred CCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC--------------
Confidence 9999999999873 3345667888888999999999999999998877777888999999986432
Q ss_pred EeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCceEEEEe
Q 038881 389 YKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLA 468 (794)
Q Consensus 389 ~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~ 468 (794)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCcccCceEe
Q 038881 469 NAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILKPDITA 548 (794)
Q Consensus 469 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~A 548 (794)
+.++.||+||+.. .||||+|
T Consensus 233 -------------------------------------------------------~~~~~fSn~G~~~-----~~~di~A 252 (357)
T 4h6x_A 233 -------------------------------------------------------GTPCHFSNWGGNN-----TKEGILA 252 (357)
T ss_dssp -------------------------------------------------------SSBCTTCC---CT-----TTTEEEE
T ss_pred -------------------------------------------------------CcccccccCCCCC-----Cccceee
Confidence 4788999999753 5899999
Q ss_pred CCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhh----CCCCCHHHHHHHHHhcCccccCCCcc
Q 038881 549 PGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTL----HPEWSPAAIKSAIMTTASIQDNNKGQ 624 (794)
Q Consensus 549 PG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~lsp~~ik~~L~~TA~~~~~~g~~ 624 (794)
||++|+++++.. +.|..++|||||||||||++|||+++ +|.|+++|||++|++||++++...
T Consensus 253 PG~~i~s~~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~-- 318 (357)
T 4h6x_A 253 PGEEILGAQPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV-- 318 (357)
T ss_dssp ECSSEEECCTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC----------
T ss_pred cCCCeEeccCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC--
Confidence 999999998763 36778999999999999999999954 668999999999999999875322
Q ss_pred cccCCCCCCCCCcccccccccccccC
Q 038881 625 ILNASSYKATPFSYGAGHIQPNLAMD 650 (794)
Q Consensus 625 ~~~~~~~~~~~~~~G~G~vn~~~Al~ 650 (794)
...+.+||+|+||+.+|++
T Consensus 319 -------~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 319 -------VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp -------------CTTCBCCHHHHHH
T ss_pred -------CCCcccceeEEecHHHHHH
Confidence 2346789999999999997
No 16
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=3.5e-51 Score=434.26 Aligned_cols=267 Identities=28% Similarity=0.405 Sum_probs=224.9
Q ss_pred ccccccCCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccc
Q 038881 144 FLGLERNGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKG 223 (794)
Q Consensus 144 ~~gl~~~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~ 223 (794)
+|++..+. +..+|+.. +|+||+|||||||||++||+|.++ ++..++|.++
T Consensus 12 ~w~l~~i~---~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~~ 61 (279)
T 1thm_A 12 QYGPQKIQ---APQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK--------------------------VVGGWDFVDN 61 (279)
T ss_dssp CCHHHHTT---HHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT--------------------------EEEEEETTTT
T ss_pred ccChhhCC---hHHHHhcC-CCCCCEEEEEccCCCCCCcchhcC--------------------------ccccccccCC
Confidence 45565543 67899886 799999999999999999999743 4455666543
Q ss_pred cccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHH
Q 038881 224 YAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAF 303 (794)
Q Consensus 224 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai 303 (794)
...+.|..||||||||||+|...+ ...+.||||+|+|+.+|+++.. | .++.+++++||
T Consensus 62 -----------~~~~~d~~gHGT~vAgiia~~~~n--------~~g~~GvAp~a~l~~~~v~~~~--g-~~~~~~~~~ai 119 (279)
T 1thm_A 62 -----------DSTPQNGNGHGTHCAGIAAAVTNN--------STGIAGTAPKASILAVRVLDNS--G-SGTWTAVANGI 119 (279)
T ss_dssp -----------BSCCCCSSSHHHHHHHHHHCCCSS--------SSSCCCSSTTCEEEEEECSCTT--S-CCCHHHHHHHH
T ss_pred -----------CCCCCCCCCcHHHHHHHHhCccCC--------CCccEEeCCCCEEEEEEeeCCC--C-CccHHHHHHHH
Confidence 234578899999999999997522 2235899999999999999876 3 46888999999
Q ss_pred HHhHhCCceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEeccccCCCCccceEEe
Q 038881 304 DMAIHDGVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTVSNIAPWQITVGASTMDRDFPSYVVV 383 (794)
Q Consensus 304 ~~a~~~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~ 383 (794)
+||++++++|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 120 ~~a~~~g~~Vin~S~G~~~---~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--------- 187 (279)
T 1thm_A 120 TYAADQGAKVISLSLGGTV---GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN--------- 187 (279)
T ss_dssp HHHHHTTCSEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT---------
T ss_pred HHHHHCCCCEEEEecCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC---------
Confidence 9999999999999999873 3456788888999999999999999998777777888999999986432
Q ss_pred cCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCce
Q 038881 384 SNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAV 463 (794)
Q Consensus 384 ~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~ 463 (794)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCccc
Q 038881 464 GMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILK 543 (794)
Q Consensus 464 gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~K 543 (794)
+.++.||++||.+
T Consensus 188 ------------------------------------------------------------~~~~~fS~~G~~~------- 200 (279)
T 1thm_A 188 ------------------------------------------------------------DNKSSFSTYGSWV------- 200 (279)
T ss_dssp ------------------------------------------------------------SCBCTTCCCCTTC-------
T ss_pred ------------------------------------------------------------CCcCCcCCCCCce-------
Confidence 3678999999876
Q ss_pred CceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccccCCCc
Q 038881 544 PDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQDNNKG 623 (794)
Q Consensus 544 PDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~ 623 (794)
||+|||++|+++++. +.|..++|||||||||||++||| ++|.+++++||++|++||+++...
T Consensus 201 -dv~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~-- 262 (279)
T 1thm_A 201 -DVAAPGSSIYSTYPT-------------STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT-- 262 (279)
T ss_dssp -CEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB--
T ss_pred -EEEEcCCCeEEEeCC-------------CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC--
Confidence 999999999999876 47999999999999999999999 579999999999999999987432
Q ss_pred ccccCCCCCCCCCcccccccccccccC
Q 038881 624 QILNASSYKATPFSYGAGHIQPNLAMD 650 (794)
Q Consensus 624 ~~~~~~~~~~~~~~~G~G~vn~~~Al~ 650 (794)
...||+|+||+.+|++
T Consensus 263 -----------~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 263 -----------GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp -----------TTTBSSEECCHHHHHH
T ss_pred -----------CccccCCeeCHHHHhc
Confidence 2469999999999985
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=4.2e-50 Score=433.39 Aligned_cols=290 Identities=27% Similarity=0.342 Sum_probs=228.3
Q ss_pred ccccccCCCccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccc
Q 038881 144 FLGLERNGRVESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKG 223 (794)
Q Consensus 144 ~~gl~~~~~~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~ 223 (794)
.|++..+. +..+|..+++|+||+|||||||||++||+|.++ +...++|...
T Consensus 7 ~W~l~~i~---~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~--------------------------~~~~~~~~~~ 57 (310)
T 2ixt_A 7 PWGIKAIY---NNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN--------------------------VEQCKDFTGA 57 (310)
T ss_dssp CHHHHHHH---TCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT--------------------------EEEEEESSSS
T ss_pred CCchhhcC---chhhhhccCCCCCcEEEEEecCCCCCCHHHhhc--------------------------ccccccccCC
Confidence 34555443 678999999999999999999999999999753 3344555532
Q ss_pred cccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHH
Q 038881 224 YAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAF 303 (794)
Q Consensus 224 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai 303 (794)
. +.......|..||||||||||++.... +...+.||||+|+|+.+|+++.. | .+..+++++||
T Consensus 58 ~-------~~~~~~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~--g-~~~~~~~~~ai 120 (310)
T 2ixt_A 58 T-------TPINNSCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDS--G-SGYSDDIAAAI 120 (310)
T ss_dssp S-------SCEETCCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTT--S-CCCHHHHHHHH
T ss_pred C-------CCCCCCCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCC--C-CCcHHHHHHHH
Confidence 1 000123568899999999999987411 22345899999999999999876 3 46889999999
Q ss_pred HHhHhCCc-----eEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCC--CCcCCCCCceEEeccccCCCC
Q 038881 304 DMAIHDGV-----DVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTD--STVSNIAPWQITVGASTMDRD 376 (794)
Q Consensus 304 ~~a~~~g~-----dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~--~~~~~~ap~vitVgAs~~~~~ 376 (794)
+|++++++ +|||||||... ....+..++.++.++|++||+||||+|... ..++...+++|+|||++...
T Consensus 121 ~~a~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~- 196 (310)
T 2ixt_A 121 RHAADQATATGTKTIISMSLGSSA---NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ- 196 (310)
T ss_dssp HHHHHHHHHHTCCEEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE-
T ss_pred HHHHHhhhccCCCeEEEEcCCCCC---CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc-
Confidence 99999888 99999999873 245677888889999999999999999763 34556779999999864210
Q ss_pred ccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHH
Q 038881 377 FPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQ 456 (794)
Q Consensus 377 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~ 456 (794)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCC--ccccccCCCC
Q 038881 457 ALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAP--IMAAFSSKGP 534 (794)
Q Consensus 457 ~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSS~Gp 534 (794)
..+ .++.||++||
T Consensus 197 -----------------------------------------------------------------~~g~~~~~~~S~~G~ 211 (310)
T 2ixt_A 197 -----------------------------------------------------------------QNGTYRVADYSSRGY 211 (310)
T ss_dssp -----------------------------------------------------------------ETTEEEECTTSCCCC
T ss_pred -----------------------------------------------------------------cCCCeeeccccCCCC
Confidence 012 6788999999
Q ss_pred CCCC----CCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHH
Q 038881 535 SSVA----PEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSA 610 (794)
Q Consensus 535 ~~~~----~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~ 610 (794)
.... ..+.||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++++||++
T Consensus 212 ~~~~g~~~~~~~~~di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~ 278 (310)
T 2ixt_A 212 ISTAGDYVIQEGDIEISAPGSSVYSTWYN-------------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSN 278 (310)
T ss_dssp TTTTTSSSCCTTCCCEEEECSSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred ccCCccccccCCCeeEECCCCCEeeecCC-------------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 5321 134599999999999999875 48999999999999999999999999999999999999
Q ss_pred HHhcCccccCCCcccccCCCCCCCCCccccccccc
Q 038881 611 IMTTASIQDNNKGQILNASSYKATPFSYGAGHIQP 645 (794)
Q Consensus 611 L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~ 645 (794)
|++||++++..+. .......+..+|||++|+
T Consensus 279 L~~tA~~~~~~~~----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 279 LQERAKSVDIKGG----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp HHHHHHTSCCCBS----TTCCSSSBTTTBTCBCCC
T ss_pred HHhhCcccCCCCC----cccccCCccccccceeec
Confidence 9999998764321 112355678999999986
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=4.6e-51 Score=434.82 Aligned_cols=266 Identities=20% Similarity=0.191 Sum_probs=212.1
Q ss_pred cCCC-CceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccccccccCCCCCCCCCCCC
Q 038881 162 ARYG-EDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKGYAAAVGPLNSSFDTPRD 240 (794)
Q Consensus 162 g~~G-~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~d 240 (794)
..+| +||+|||||||||++||+|.++ .+..+.+... .......|
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~---------~~~~~d~~ 47 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA--------------------------DLTVLPTLAP---------TAARSDGF 47 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC--------------------------EEEECCCSSC---------CCCCTTCH
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC--------------------------eeecCcCCCC---------CCCCCCCC
Confidence 3578 7999999999999999999754 1111122211 00122335
Q ss_pred CCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhHhCCceEEEEccCC
Q 038881 241 KDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAIHDGVDVLSVSLGG 320 (794)
Q Consensus 241 ~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~~g~dVIN~SlG~ 320 (794)
.+||||||||||+|+. +..+.||||+|+|+.+|++.+... .....++++||+||++++++|||||||.
T Consensus 48 ~~gHGT~VAGiiag~~----------~~~~~GvAp~a~l~~~kv~~~~~~--~~~~~~i~~ai~~a~~~~~~Vin~S~G~ 115 (282)
T 3zxy_A 48 MSAHGTHVASIIFGQP----------ETSVPGIAPQCRGLIVPIFSDDRR--RITQLDLARGIERAVNAGAHIINISGGE 115 (282)
T ss_dssp HHHHHHHHHHHHHCCT----------TSSSCCSSTTSEEEEEECSCSSSS--CCCHHHHHHHHHHHHHTTCSEEEECCCE
T ss_pred CCCcccceeehhhccC----------CceeeeeccccceEeeEeeccccc--cchHHHHHHHHHHhhccCCeEEeccCcc
Confidence 6799999999999874 223589999999999999876532 4678899999999999999999999997
Q ss_pred CC-CCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEeccccCCCCccceEEecCCeEEeeeecCCCCC
Q 038881 321 GP-SKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTVSNIAPWQITVGASTMDRDFPSYVVVSNNKRYKGQSLSSKGL 399 (794)
Q Consensus 321 ~~-~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 399 (794)
.. .......+..++..+.++|+++|+||||+|......+...+++|+|||++.+
T Consensus 116 ~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------- 170 (282)
T 3zxy_A 116 LTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH------------------------- 170 (282)
T ss_dssp EESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT-------------------------
T ss_pred ccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC-------------------------
Confidence 63 2234455777888899999999999999998877777788999999986432
Q ss_pred CCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCceEEEEeccCCCCccccC
Q 038881 400 PSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLANAQENGNELLA 479 (794)
Q Consensus 400 ~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~ 479 (794)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCcccCceEeCCceEEeeecC
Q 038881 480 DPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILKPDITAPGVTIIAAYTE 559 (794)
Q Consensus 480 ~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~Sa~~~ 559 (794)
+.++.||+||+. ..||||+|||++|+++++.
T Consensus 171 --------------------------------------------~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~ 201 (282)
T 3zxy_A 171 --------------------------------------------GHPLDFSNWGST-----YEQQGILAPGEDILGAKPG 201 (282)
T ss_dssp --------------------------------------------SCBCSSSCCCHH-----HHHHEEEEECSSEEEECTT
T ss_pred --------------------------------------------CccccccCCCCC-----ccccceeccCcceeeecCC
Confidence 467889999864 3688999999999999876
Q ss_pred CCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhC----CCCCHHHHHHHHHhcCccccCCCcccccCCCCCCCC
Q 038881 560 AAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLH----PEWSPAAIKSAIMTTASIQDNNKGQILNASSYKATP 635 (794)
Q Consensus 560 ~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~ 635 (794)
+.|..++|||||||||||++|||+|++ |.++|+|||++|++||++++.. .+...
T Consensus 202 -------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~---------~~~~~ 259 (282)
T 3zxy_A 202 -------------GGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD---------APEQA 259 (282)
T ss_dssp -------------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC----------------C
T ss_pred -------------CceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC---------CCCcc
Confidence 489999999999999999999999874 7899999999999999886432 13345
Q ss_pred CcccccccccccccC
Q 038881 636 FSYGAGHIQPNLAMD 650 (794)
Q Consensus 636 ~~~G~G~vn~~~Al~ 650 (794)
..+|+|+||+.+|++
T Consensus 260 ~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 260 RRCLAGRLNVSGAFT 274 (282)
T ss_dssp GGGTTCBCCHHHHHH
T ss_pred CceeeeEeCHHHHHH
Confidence 689999999999986
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=7.3e-51 Score=440.61 Aligned_cols=274 Identities=27% Similarity=0.412 Sum_probs=225.0
Q ss_pred ccccccCCCccccccccccCCCC--ceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecc
Q 038881 144 FLGLERNGRVESNSIWKKARYGE--DTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFN 221 (794)
Q Consensus 144 ~~gl~~~~~~~~~~~~~~g~~G~--GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~ 221 (794)
.|++..+. +..+|+.+ +|+ ||+|||||||||++||+|.++ +...++|.
T Consensus 9 ~W~l~~i~---~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~--------------------------~~~~~~~~ 58 (320)
T 2z30_A 9 PWGIERVK---APSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN--------------------------IAWCVSTL 58 (320)
T ss_dssp CHHHHHTT---CGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG--------------------------EEEEEECG
T ss_pred CCChhhcC---hHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc--------------------------cccCcccc
Confidence 45666554 67899988 999 999999999999999999743 33444554
Q ss_pred cccccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHH
Q 038881 222 KGYAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILA 301 (794)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ 301 (794)
.+. ......+..|..||||||||||+|.. ++..+.||||+|+|+.+|+++.. | .+..+++++
T Consensus 59 ~~~------~~~~~~~~~d~~gHGT~vAgiia~~~---------n~~g~~GvAp~a~l~~~~v~~~~--g-~~~~~~i~~ 120 (320)
T 2z30_A 59 RGK------VSTKLRDCADQNGHGTHVIGTIAALN---------NDIGVVGVAPGVQIYSVRVLDAR--G-SGSYSDIAI 120 (320)
T ss_dssp GGC------CBCCHHHHBCSSSHHHHHHHHHHCCS---------SSBSCCCSSTTCEEEEEECSCTT--S-EEEHHHHHH
T ss_pred CCc------cCCCCCCCCCCCCCHHHHHHHHHccc---------CCCceEeeCCCCEEEEEEeeCCC--C-CccHHHHHH
Confidence 331 00001123578999999999999863 12235899999999999999876 4 467899999
Q ss_pred HHHHhHhC--------------------CceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCC
Q 038881 302 AFDMAIHD--------------------GVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTVSNI 361 (794)
Q Consensus 302 ai~~a~~~--------------------g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ 361 (794)
||+||+++ +++|||||||... ....+..++.++.++|++||+||||+|.....++..
T Consensus 121 ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~ 197 (320)
T 2z30_A 121 GIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAA 197 (320)
T ss_dssp HHHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTT
T ss_pred HHHHHHhCcccccccccccccccccccCCceEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCccc
Confidence 99999987 9999999999873 245677788889999999999999999887777788
Q ss_pred CCceEEeccccCCCCccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEE
Q 038881 362 APWQITVGASTMDRDFPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKIL 441 (794)
Q Consensus 362 ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv 441 (794)
.|++|+|||++.+
T Consensus 198 ~~~vi~Vga~~~~------------------------------------------------------------------- 210 (320)
T 2z30_A 198 YPEVIAVGAIDSN------------------------------------------------------------------- 210 (320)
T ss_dssp STTEEEEEEECTT-------------------------------------------------------------------
T ss_pred CCCeEEEEeeCCC-------------------------------------------------------------------
Confidence 8999999986432
Q ss_pred EEecCCchhhhHHHHHHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCC
Q 038881 442 VCLRGDNARIDKGQQALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLK 521 (794)
Q Consensus 442 l~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~ 521 (794)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccCCCCCCCCCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhC--
Q 038881 522 PAPIMAAFSSKGPSSVAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLH-- 599 (794)
Q Consensus 522 ~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-- 599 (794)
+.++.||++|| +|+|||++|+++++. +.|..++|||||||||||++|||+|++
T Consensus 211 --~~~~~~S~~g~----------~v~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~ 265 (320)
T 2z30_A 211 --DNIASFSNRQP----------EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQ 265 (320)
T ss_dssp --SCBCTTSCSSC----------SEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCcCcccCCCC----------CEEeCCCCeEEeccC-------------CCeEeccCHHHHHHHHHHHHHHHHHhchh
Confidence 46789999997 789999999999876 489999999999999999999999998
Q ss_pred -----------CCCCHHHHHHHHHhcCccccCCCcccccCCCCCCCCCcccccccccccccCC
Q 038881 600 -----------PEWSPAAIKSAIMTTASIQDNNKGQILNASSYKATPFSYGAGHIQPNLAMDP 651 (794)
Q Consensus 600 -----------p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 651 (794)
|.|++.+||++|++||+++... ..+..||+|+||+.+|++.
T Consensus 266 ~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~~-----------g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 266 KYGKILPVGTFDDISKNTVRGILHITADDLGPT-----------GWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp HHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCCHHHHHHH
T ss_pred hcccccccccCCCCCHHHHHHHHHhhCccCCCC-----------CCCCCcCCceeCHHHHHHH
Confidence 9999999999999999987432 2356899999999999863
No 20
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1.6e-50 Score=436.04 Aligned_cols=272 Identities=23% Similarity=0.259 Sum_probs=219.4
Q ss_pred cccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccccccccCCCCCCC
Q 038881 156 NSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKGYAAAVGPLNSSF 235 (794)
Q Consensus 156 ~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 235 (794)
+++|+....++||+|||||||||++||+|.++ .+.+..+|..+ +.
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~-------------------------~~~~~~~~~~~----------~~ 55 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA-------------------------DLTRLPSLVSG----------EA 55 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC-------------------------EEEECC-----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC-------------------------cccCCCcccCC----------CC
Confidence 48999987779999999999999999999754 11122223222 01
Q ss_pred CCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhHhCCceEEE
Q 038881 236 DTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAIHDGVDVLS 315 (794)
Q Consensus 236 ~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~~g~dVIN 315 (794)
....|.+||||||||||+|+. ++.+.||||+|+|+.+|++.+.. + .+....+++||+||++++++|||
T Consensus 56 ~~~~d~~gHGThVAGiiag~~----------~~~~~GVAp~a~l~~~kv~~~~~-~-~~~~~~i~~ai~~a~~~g~~vi~ 123 (306)
T 4h6w_A 56 NANGSMSTHGTHVASIIFGQH----------DSPVTGIAPQCRGLIVPVFADES-L-KLSQLDLSRAIEQAVNNGANIIN 123 (306)
T ss_dssp ---CCCCHHHHHHHHHHHCCT----------TSSSCCSSTTSEEEECCCCCSSS-C-CCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCCCCCCCchHHHHHHHHccc----------cCCcceeccccccceeecccccc-c-cchHHHHHHHHHHhhcccceeee
Confidence 234467899999999999874 23458999999999999987653 2 47888999999999999999999
Q ss_pred EccCCCC-CCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEeccccCCCCccceEEecCCeEEeeeec
Q 038881 316 VSLGGGP-SKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTVSNIAPWQITVGASTMDRDFPSYVVVSNNKRYKGQSL 394 (794)
Q Consensus 316 ~SlG~~~-~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~ap~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~ 394 (794)
+|||... .......+..++..+.++|++||+||||+|.....++...+++|+|||++..
T Consensus 124 ~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~-------------------- 183 (306)
T 4h6w_A 124 VSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ-------------------- 183 (306)
T ss_dssp ECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT--------------------
T ss_pred ccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC--------------------
Confidence 9999762 2334456778888999999999999999998777777788999999986432
Q ss_pred CCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCceEEEEeccCCCC
Q 038881 395 SSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLANAQENG 474 (794)
Q Consensus 395 ~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~ 474 (794)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCcccCceEeCCceEE
Q 038881 475 NELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILKPDITAPGVTII 554 (794)
Q Consensus 475 ~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~ 554 (794)
+.+++||++|+. ..||||+|||++|+
T Consensus 184 -------------------------------------------------~~~~~~s~~g~~-----~~~~di~APG~~i~ 209 (306)
T 4h6w_A 184 -------------------------------------------------GKPVDFSNWGDA-----YQKQGILAPGKDIL 209 (306)
T ss_dssp -------------------------------------------------SCBCSSSCBCHH-----HHHHEEEEECSSEE
T ss_pred -------------------------------------------------CCccccccccCC-----cCcceeecCCcCcc
Confidence 366789999964 36889999999999
Q ss_pred eeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhh----CCCCCHHHHHHHHHhcCccccCCCcccccCCC
Q 038881 555 AAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTL----HPEWSPAAIKSAIMTTASIQDNNKGQILNASS 630 (794)
Q Consensus 555 Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~ 630 (794)
++++. +.|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+
T Consensus 210 s~~~~-------------~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~-------- 268 (306)
T 4h6w_A 210 GAKPN-------------GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD-------- 268 (306)
T ss_dssp EECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT--------
T ss_pred cccCC-------------CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC--------
Confidence 99876 48999999999999999999999864 699999999999999999875433
Q ss_pred CCCCCCcccccccccccccC
Q 038881 631 YKATPFSYGAGHIQPNLAMD 650 (794)
Q Consensus 631 ~~~~~~~~G~G~vn~~~Al~ 650 (794)
......||+|+||+.+|++
T Consensus 269 -~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 269 -TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp -CSCGGGGTTCBCCHHHHHH
T ss_pred -CCCCCCcceeecCHHHHHH
Confidence 2234579999999999997
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=5e-50 Score=439.53 Aligned_cols=279 Identities=17% Similarity=0.133 Sum_probs=221.6
Q ss_pred ccccccCCCccccccccccCCCC--ceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecc
Q 038881 144 FLGLERNGRVESNSIWKKARYGE--DTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFN 221 (794)
Q Consensus 144 ~~gl~~~~~~~~~~~~~~g~~G~--GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~ 221 (794)
.|++..+. +..+|+. ++|+ ||+||||||||| +||+|.++ ++..++|.
T Consensus 24 ~W~l~~i~---~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~--------------------------~~~~~~~~ 72 (347)
T 2iy9_A 24 PWYFDAIG---LTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS--------------------------EFAKFSFT 72 (347)
T ss_dssp CHHHHHHT---CCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC--------------------------EEEEEECB
T ss_pred CcchhhCC---hHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC--------------------------cccCCccc
Confidence 34555443 5689988 8999 999999999999 99999753 34445554
Q ss_pred cccccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHH
Q 038881 222 KGYAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILA 301 (794)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ 301 (794)
++- .+. ......|..||||||||||+|. .| +.||||+|+|+.+|+++.. + .. ++++
T Consensus 73 ~~~----~~~--~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~--~--~~--~~~~ 128 (347)
T 2iy9_A 73 QDG----SPF--PVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDG--V--QD--SWIR 128 (347)
T ss_dssp TTC----CSS--CCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSB--C--TT--HHHH
T ss_pred CCC----CCC--CCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCC--C--HH--HHHH
Confidence 320 000 1124567889999999999986 22 3899999999999999765 2 22 9999
Q ss_pred HHHHhHhC------CceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCC-------CCCcCCCCC-----
Q 038881 302 AFDMAIHD------GVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPT-------DSTVSNIAP----- 363 (794)
Q Consensus 302 ai~~a~~~------g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~-------~~~~~~~ap----- 363 (794)
||+||+++ +++|||||||..........+..++..+.++|++||+||||+|.. ...++...+
T Consensus 129 ai~~a~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~ 208 (347)
T 2iy9_A 129 AIESIMSNVFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSV 208 (347)
T ss_dssp HHHHHHTCTTSCTTEEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHH
T ss_pred HHHHHHhhhhcccCCceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCcccccc
Confidence 99999999 999999999987433455678888889999999999999999975 334555677
Q ss_pred -----ceEEeccccC--CCCccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCc
Q 038881 364 -----WQITVGASTM--DRDFPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKV 436 (794)
Q Consensus 364 -----~vitVgAs~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 436 (794)
++|+|||++. +....
T Consensus 209 ~~~~~~vi~Vga~~~~~~g~~~---------------------------------------------------------- 230 (347)
T 2iy9_A 209 NKKQDPVIRVAALAQYRKGETP---------------------------------------------------------- 230 (347)
T ss_dssp HHHTCCEEEEEEECCCCTTSCC----------------------------------------------------------
T ss_pred ccccCCEEEEEEcccCCCCcee----------------------------------------------------------
Confidence 9999999754 21000
Q ss_pred cceEEEEecCCchhhhHHHHHHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEecee
Q 038881 437 KGKILVCLRGDNARIDKGQQALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATT 516 (794)
Q Consensus 437 ~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~ 516 (794)
T Consensus 231 -------------------------------------------------------------------------------- 230 (347)
T 2iy9_A 231 -------------------------------------------------------------------------------- 230 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCCCCccccccCCCCCCCCCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHH
Q 038881 517 ELGLKPAPIMAAFSSKGPSSVAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLK 596 (794)
Q Consensus 517 ~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 596 (794)
.....++.||++||+ ||||+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 231 ----~~~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~ 286 (347)
T 2iy9_A 231 ----VLHGGGITGSRFGNN-------WVDIAAPGQNITFLRPD-------------AKTGTGSGTSEATAIVSGVLAAMT 286 (347)
T ss_dssp ----CBCCCSSSCBCBCTT-------TCSEEEECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHH
T ss_pred ----cccCCCCCCCCCCCC-------CCEEEeCCCCeEeecCC-------------CCeEeccchHHHHHHHHHHHHHHH
Confidence 001356799999994 56999999999999875 489999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCccccCCCcccccCCCCCCCCCcccccccccccccCC
Q 038881 597 TLHPEWSPAAIKSAIMTTASIQDNNKGQILNASSYKATPFSYGAGHIQPNLAMDP 651 (794)
Q Consensus 597 q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 651 (794)
|++|+|++.+||++|++||+++...+ +..+|+|+||+.+|++.
T Consensus 287 ~~~p~lt~~~v~~~L~~tA~~~~~~~------------~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 287 SCNPRATATELKRTLLESADKYPSLV------------DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp HHCTTSCHHHHHHHHHHHSEECGGGT------------TTSGGGEECCHHHHHHH
T ss_pred HhCCCCCHHHHHHHHHHhCccCCCCC------------CccccCCEecHHHHHHH
Confidence 99999999999999999999874332 36899999999999974
No 22
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=2.2e-48 Score=469.28 Aligned_cols=355 Identities=23% Similarity=0.227 Sum_probs=249.9
Q ss_pred CCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhHh-----CCceE
Q 038881 239 RDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAIH-----DGVDV 313 (794)
Q Consensus 239 ~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~-----~g~dV 313 (794)
.|++||||||||||||.. ++..+.||||+|+|+.+|+++... +.......++.+|.+|++ .+++|
T Consensus 267 ~D~~GHGThVAGIIAa~~---------N~~g~~GVAP~AkI~~vKVld~~~-g~~~t~s~l~~AI~~Aid~a~~~~gadV 336 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH---------SSRDVDGVAPNAKIVSMTIGDGRL-GSMETGTALVRAMTKVMELCRDGRRIDV 336 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC---------SSSSSCCSCTTCEEEEEECBCTTT-SSCBCHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred CCCCCcHHHHHHHHhcCC---------CCCCceeecCCCEEEEEEeccCCC-CcccChHHHHHHHHHHHHHHhhcCCceE
Confidence 478999999999999984 233458999999999999997653 212356778888888877 79999
Q ss_pred EEEccCCCCCCCCCCHHHHHHHHHH-hCCcEEEEecCCCCCCCCCc--CC--CCCceEEeccccCCCCccceEEecCCeE
Q 038881 314 LSVSLGGGPSKFFNDSTAIGSFHAV-KHGMVVICSAGNSGPTDSTV--SN--IAPWQITVGASTMDRDFPSYVVVSNNKR 388 (794)
Q Consensus 314 IN~SlG~~~~~~~~~~~~~a~~~a~-~~Gv~vV~AAGN~G~~~~~~--~~--~ap~vitVgAs~~~~~~~~~~~~~~~~~ 388 (794)
||||||........+.+..++.++. ++|++||+||||+|+...++ ++ .++++|+|||++...........
T Consensus 337 INmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~----- 411 (1354)
T 3lxu_X 337 INMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM----- 411 (1354)
T ss_dssp EEECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC---------
T ss_pred EEcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc-----
Confidence 9999999854334567777888875 89999999999999875554 33 37999999998654311000000
Q ss_pred EeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCceEEEEe
Q 038881 389 YKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLA 468 (794)
Q Consensus 389 ~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~ 468 (794)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCcccCceEe
Q 038881 469 NAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILKPDITA 548 (794)
Q Consensus 469 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~A 548 (794)
.....+.+++||||||+. ++++||||+|
T Consensus 412 --------------------------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaA 439 (1354)
T 3lxu_X 412 --------------------------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCA 439 (1354)
T ss_dssp --------------------------------------------------------CCCCCCCCSCCS--SSSCCEEEEE
T ss_pred --------------------------------------------------ccCCCCccccccCCCCCc--cCCCcceEEe
Confidence 000125789999999998 8999999999
Q ss_pred CCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHh----hCCCCCHHHHHHHHHhcCccccCCCcc
Q 038881 549 PGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKT----LHPEWSPAAIKSAIMTTASIQDNNKGQ 624 (794)
Q Consensus 549 PG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~lsp~~ik~~L~~TA~~~~~~g~~ 624 (794)
||++|+++..... ++|..++|||||||||||++|||++ .+|.|++.+||++|++||+++..
T Consensus 440 PG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~---- 504 (1354)
T 3lxu_X 440 PGGAIASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY---- 504 (1354)
T ss_dssp EC--------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT----
T ss_pred cCceEEEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC----
Confidence 9999998865321 4789999999999999999999986 79999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccccccccCCCccccCCchhhhhhhhcCCCC-ccceEecccccccCCCCCCCCCCCCCeEEee
Q 038881 625 ILNASSYKATPFSYGAGHIQPNLAMDPGLVYDLTENDYLNFLCALGYN-KTQIALFSDKTYRCPEYVSTANFNYPSITVP 703 (794)
Q Consensus 625 ~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~ps~~~~ 703 (794)
.+++.||+|+||+.+|++..+.++....+++.|.|..+.+ ...|.+... .+
T Consensus 505 --------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIylR~~---~~----------------- 556 (1354)
T 3lxu_X 505 --------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIHLRQG---VQ----------------- 556 (1354)
T ss_dssp --------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEEECSS---CC-----------------
T ss_pred --------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceEEecc---cc-----------------
Confidence 2467899999999999999999999999999999998853 222221110 00
Q ss_pred cCCceEEEEE----EEEecC---C--Cce--EEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEcccccCCCCeEE
Q 038881 704 KLSGSIIVSR----TVRNVG---S--PGT--YIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVRKVRAATKDYVF 772 (794)
Q Consensus 704 ~~~~~~~~~~----tv~n~~---~--~~t--y~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~~~ 772 (794)
....++++ ++.|.. . ... -++.+.... --| ..|..+.+ .++.++|.|.++++. ...+.++
T Consensus 557 --~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv-~~p~~l~l--~~~~r~~~v~vDp~~---L~~G~h~ 627 (1354)
T 3lxu_X 557 --RNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWV-QCGAFLDL--SYGTRSIAVRVDPTG---LQPGVHS 627 (1354)
T ss_dssp --CSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTE-EECSCEEC--TTSCEEEEEEECGGG---CCSEEEE
T ss_pred --CCceEEEEEEeeeecCcccCChhhccceEEEEEEecCC-Cce-ecccceee--cCCCceEEEEECCCC---CCCccee
Confidence 12233333 342211 1 212 222222211 123 34888877 578899999999987 4557789
Q ss_pred EEEEEEeC----CccEEEeEEEEE
Q 038881 773 GDLVWADD----KQHQVRSPIVVN 792 (794)
Q Consensus 773 G~~~~~~~----~~~~v~~P~~~~ 792 (794)
+.|..-+. .++..|||+.|-
T Consensus 628 ~~v~~~D~~~~~~gp~f~ipvTv~ 651 (1354)
T 3lxu_X 628 AVIRAYDTDCVQKGSLFEIPVTVV 651 (1354)
T ss_dssp EEEEEEESSCTTSCCSEEEEEEEE
T ss_pred EEEEEEEcCCcccCceEEeeEEEE
Confidence 99987653 369999999874
No 23
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2e-48 Score=413.40 Aligned_cols=248 Identities=26% Similarity=0.378 Sum_probs=209.0
Q ss_pred ccccccCCCc--cccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecc
Q 038881 144 FLGLERNGRV--ESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFN 221 (794)
Q Consensus 144 ~~gl~~~~~~--~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~ 221 (794)
.|+|+++.+. +...+|..+++|+||+|||||||||++||+|.++ ++.+++|.
T Consensus 5 ~W~l~~i~~~~~~~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~ 58 (284)
T 1sh7_A 5 IWGLDRIDQRNLPLDRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR--------------------------SVSGYDFV 58 (284)
T ss_dssp CHHHHHHTCSSSSCCSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC--------------------------EEEEEETT
T ss_pred CcChhhcCCcccCchhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccccccc
Confidence 4566555432 3467899999999999999999999999999753 34455665
Q ss_pred cccccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHH
Q 038881 222 KGYAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILA 301 (794)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ 301 (794)
++ ...+.|..||||||||||+|.. .||||+|+|+.+|+++.. | .+..+++++
T Consensus 59 ~~-----------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~--g-~~~~~~~~~ 110 (284)
T 1sh7_A 59 DN-----------DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCS--G-SGTTSGVIS 110 (284)
T ss_dssp TT-----------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTT--S-CBCHHHHHH
T ss_pred CC-----------CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCC--C-CcCHHHHHH
Confidence 43 2346688999999999999863 699999999999999876 4 478899999
Q ss_pred HHHHhHh--CCceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcCCCCCceEEeccccCCCCcc
Q 038881 302 AFDMAIH--DGVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDS-TVSNIAPWQITVGASTMDRDFP 378 (794)
Q Consensus 302 ai~~a~~--~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~ap~vitVgAs~~~~~~~ 378 (794)
||+|+++ .+++|||||||.. ....+..++.++.++|++||+||||+|.... ..+...|++|+|||++.+
T Consensus 111 ai~~a~~~~~~~~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---- 182 (284)
T 1sh7_A 111 GVDWVAQNASGPSVANMSLGGG----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS---- 182 (284)
T ss_dssp HHHHHHHHCCSSEEEEECCCBS----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT----
T ss_pred HHHHHHhCCCCCcEEEeCCCCC----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC----
Confidence 9999997 4799999999987 3456788888999999999999999997653 345578999999986432
Q ss_pred ceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHH
Q 038881 379 SYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQAL 458 (794)
Q Consensus 379 ~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 458 (794)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCC
Q 038881 459 LAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVA 538 (794)
Q Consensus 459 ~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~ 538 (794)
+.++.||++||.+
T Consensus 183 -----------------------------------------------------------------~~~~~~S~~G~~~-- 195 (284)
T 1sh7_A 183 -----------------------------------------------------------------DSRSSFSNWGSCV-- 195 (284)
T ss_dssp -----------------------------------------------------------------SBBCTTCCBSTTC--
T ss_pred -----------------------------------------------------------------CCcCcccCCCCcc--
Confidence 4678999999976
Q ss_pred CCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccc
Q 038881 539 PEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQ 618 (794)
Q Consensus 539 ~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~ 618 (794)
||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|+++|||++|++||++.
T Consensus 196 ------di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 256 (284)
T 1sh7_A 196 ------DLFAPGSQIKSAWYD-------------GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASEN 256 (284)
T ss_dssp ------CEEEECSSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred ------EEEeccCCeEEecCC-------------CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccC
Confidence 999999999999876 4799999999999999999999999999999999999999999875
Q ss_pred c
Q 038881 619 D 619 (794)
Q Consensus 619 ~ 619 (794)
.
T Consensus 257 ~ 257 (284)
T 1sh7_A 257 K 257 (284)
T ss_dssp C
T ss_pred C
Confidence 3
No 24
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.1e-48 Score=441.29 Aligned_cols=295 Identities=24% Similarity=0.309 Sum_probs=226.1
Q ss_pred cccccc-ccCCCCceEEEEecCCCCC------CCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccccccc
Q 038881 155 SNSIWK-KARYGEDTIIGNLDTGVWP------ESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKGYAAA 227 (794)
Q Consensus 155 ~~~~~~-~g~~G~GV~VaVIDTGId~------~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~~~~~ 227 (794)
++.+|+ .+++|+||+|||||||||+ .||+|.++ +...++|.+.
T Consensus 10 ~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~--------------------------i~~~~~~~~~---- 59 (434)
T 1wmd_A 10 ADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK--------------------------ITALYALGRT---- 59 (434)
T ss_dssp HHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC--------------------------EEEEEETTTT----
T ss_pred chhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC--------------------------EeeeccccCC----
Confidence 458997 7999999999999999999 79999743 3344455432
Q ss_pred cCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhH
Q 038881 228 VGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAI 307 (794)
Q Consensus 228 ~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~ 307 (794)
..+.|..||||||||||+|+. ..+.||||+|+|+.+|+++..+.. .+...++.++|++++
T Consensus 60 --------~~~~d~~gHGT~VAgiiag~g-----------~~~~GvAp~a~l~~~~v~~~~g~~-~~~~~~~~~ai~~a~ 119 (434)
T 1wmd_A 60 --------NNANDTNGHGTHVAGSVLGNG-----------STNKGMAPQANLVFQSIMDSGGGL-GGLPSNLQTLFSQAY 119 (434)
T ss_dssp --------TCCCCSSSHHHHHHHHHHCCS-----------SSSCCSSTTSEEEEEECCCTTSSC-TTSCSSHHHHHHHHH
T ss_pred --------CCCCCCCCcHHHHHHHHHcCC-----------CCceeeCCCCEEEEEEeecCCCcc-ccccHHHHHHHHHHH
Confidence 256688999999999999863 125799999999999999876211 114568999999999
Q ss_pred hCCceEEEEccCCCCCCCCCCHHHHHHHHH-HhCCcEEEEecCCCCCCCCC--cCCCCCceEEeccccCCCCccceEEec
Q 038881 308 HDGVDVLSVSLGGGPSKFFNDSTAIGSFHA-VKHGMVVICSAGNSGPTDST--VSNIAPWQITVGASTMDRDFPSYVVVS 384 (794)
Q Consensus 308 ~~g~dVIN~SlG~~~~~~~~~~~~~a~~~a-~~~Gv~vV~AAGN~G~~~~~--~~~~ap~vitVgAs~~~~~~~~~~~~~ 384 (794)
+++++|||||||...... .+....++.++ .++|++||+||||+|..... .+..++++|+|||++..+...
T Consensus 120 ~~g~~Vin~S~G~~~~~~-~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~------ 192 (434)
T 1wmd_A 120 SAGARIHTNSWGAAVNGA-YTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF------ 192 (434)
T ss_dssp HTTCSEEEECCCBCCTTC-CCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG------
T ss_pred hcCCeEEEecCCCCcCCc-CCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc------
Confidence 999999999999874222 24455566555 58999999999999976543 445789999999976432000
Q ss_pred CCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCceE
Q 038881 385 NNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAVG 464 (794)
Q Consensus 385 ~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g 464 (794)
. .
T Consensus 193 -----------------------------------------~-----------------------------------~-- 194 (434)
T 1wmd_A 193 -----------------------------------------G-----------------------------------S-- 194 (434)
T ss_dssp -----------------------------------------C-----------------------------------G--
T ss_pred -----------------------------------------C-----------------------------------c--
Confidence 0 0
Q ss_pred EEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCcccC
Q 038881 465 MVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILKP 544 (794)
Q Consensus 465 vi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KP 544 (794)
.....+.++.||+|||+. ++++||
T Consensus 195 ------------------------------------------------------~~~~~~~~a~fS~~G~~~--~g~~kp 218 (434)
T 1wmd_A 195 ------------------------------------------------------YADNINHVAQFSSRGPTK--DGRIKP 218 (434)
T ss_dssp ------------------------------------------------------GGSCTTSBCTTSCCCCCT--TSCCCC
T ss_pred ------------------------------------------------------ccCCCCccccccCCCCCC--CCCCCc
Confidence 000135889999999998 899999
Q ss_pred ceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCC-----CHHHHHHHHHhcCcccc
Q 038881 545 DITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEW-----SPAAIKSAIMTTASIQD 619 (794)
Q Consensus 545 DI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~l-----sp~~ik~~L~~TA~~~~ 619 (794)
||+|||++|+++++........ .....+.|..++|||||||||||++|||+|++|++ ++++||++|++||+++.
T Consensus 219 di~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~ 297 (434)
T 1wmd_A 219 DVMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG 297 (434)
T ss_dssp CEEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS
T ss_pred eEEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccC
Confidence 9999999999998642210000 00013589999999999999999999999998865 89999999999998752
Q ss_pred CCCcccccCCCCCCCCCcccccccccccccCCC
Q 038881 620 NNKGQILNASSYKATPFSYGAGHIQPNLAMDPG 652 (794)
Q Consensus 620 ~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 652 (794)
. ..+++.||||+||+.+|++..
T Consensus 298 ~-----------~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 298 L-----------GYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp S-----------CSSCTTTTTCBCCHHHHHTCE
T ss_pred C-----------CCCCccCCcCeEeHHHhcccc
Confidence 1 346789999999999999753
No 25
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=8.2e-49 Score=428.99 Aligned_cols=299 Identities=22% Similarity=0.323 Sum_probs=220.5
Q ss_pred cccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCC-ccccccccc---cceeecccccccccC
Q 038881 154 ESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKD-AKFLCNRKL---IGARYFNKGYAAAVG 229 (794)
Q Consensus 154 ~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~-~~~~~n~ki---~g~~~~~~~~~~~~~ 229 (794)
++..+|+.+++|+||+||||||||+ +||+|.++-.. .|+ ..... .....+.+. .....+.+.+. .+
T Consensus 20 ~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~~ 89 (340)
T 3lpc_A 20 KADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYD---FISNSQISLDGDGRDADPFDEGDWFDNWA--CG 89 (340)
T ss_dssp CHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEE---CCCCHHHHCSSSSSBSCCBCCCCCBCTTT--TS
T ss_pred CHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----Ccc---ccCCccccccCCCccCCcccccccccccc--cc
Confidence 3779999999999999999999998 99999754110 110 00000 000000000 00000000000 00
Q ss_pred CCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhHh-
Q 038881 230 PLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAIH- 308 (794)
Q Consensus 230 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~- 308 (794)
..+.......|..||||||||||+|...+ ...+.||||+|+|+.+|+++.. + +...+++++|+|+++
T Consensus 90 ~~~~~~~~~~d~~gHGT~vAgiia~~~~~--------~~g~~GvAp~a~l~~~~v~~~~--~--~~~~~~~~ai~~a~~~ 157 (340)
T 3lpc_A 90 GRPDPRKERSDSSWHGSHVAGTIAAVTNN--------RIGVAGVAYGAKVVPVRALGRC--G--GYDSDISDGLYWAAGG 157 (340)
T ss_dssp CTTCGGGSCBCCCCHHHHHHHHHHCCCSS--------SSSCCCTTTTSEEEEEECCBTT--B--CCHHHHHHHHHHHHTC
T ss_pred CCCCcccCCCCCCCCHHHHHHHHHccCCC--------CCcceeecCCCEEEEEEEecCC--C--CcHHHHHHHHHHHhcc
Confidence 00011223568899999999999997522 2235899999999999999876 3 688999999999998
Q ss_pred ---------CCceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcCCCCCceEEeccccCCCCcc
Q 038881 309 ---------DGVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDS-TVSNIAPWQITVGASTMDRDFP 378 (794)
Q Consensus 309 ---------~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~ap~vitVgAs~~~~~~~ 378 (794)
.+++|||||||... .....+..++.++.++|++||+||||+|.... .++...+++|+|||++.+
T Consensus 158 ~~~~~~~~~~~~~Vin~S~G~~~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---- 231 (340)
T 3lpc_A 158 RIAGIPENRNPAKVINMSLGSDG--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR---- 231 (340)
T ss_dssp CCTTSCCCSSCCSEEEECCCEES--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT----
T ss_pred cccccccccCCCeEEEeCcCCCC--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC----
Confidence 89999999999862 23455777888899999999999999997654 345678999999986432
Q ss_pred ceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHH
Q 038881 379 SYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQAL 458 (794)
Q Consensus 379 ~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 458 (794)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCC
Q 038881 459 LAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVA 538 (794)
Q Consensus 459 ~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~ 538 (794)
+.++.||++||.+
T Consensus 232 -----------------------------------------------------------------~~~~~~S~~g~~~-- 244 (340)
T 3lpc_A 232 -----------------------------------------------------------------GIRASFSNYGVDV-- 244 (340)
T ss_dssp -----------------------------------------------------------------SSBCTTCCBSTTC--
T ss_pred -----------------------------------------------------------------CCcCCCCCCCCCc--
Confidence 4678999999854
Q ss_pred CCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhh-C---CCCCHHHHHHHHHhc
Q 038881 539 PEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTL-H---PEWSPAAIKSAIMTT 614 (794)
Q Consensus 539 ~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---p~lsp~~ik~~L~~T 614 (794)
||+|||++|+++++..... .....|..++|||||||||||++|||+|+ + |.|++++||++|++|
T Consensus 245 ------di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~t 312 (340)
T 3lpc_A 245 ------DLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVST 312 (340)
T ss_dssp ------CEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHT
T ss_pred ------eEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhc
Confidence 9999999999998764321 11246999999999999999999999998 5 999999999999999
Q ss_pred CccccCCCcccccCCCCCCCCCcccccccccccccCC
Q 038881 615 ASIQDNNKGQILNASSYKATPFSYGAGHIQPNLAMDP 651 (794)
Q Consensus 615 A~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 651 (794)
|+++.. .++..+|+|+||+.+|++.
T Consensus 313 A~~~~~------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 313 TSPFNG------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp CBCCSS------------CCSSCCCSSBCCHHHHHHH
T ss_pred CCcCCC------------CCCCCcccceecHHHHHHH
Confidence 998632 2456899999999999974
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=6.4e-48 Score=409.01 Aligned_cols=249 Identities=28% Similarity=0.398 Sum_probs=208.1
Q ss_pred ccccccCCCc--cccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecc
Q 038881 144 FLGLERNGRV--ESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFN 221 (794)
Q Consensus 144 ~~gl~~~~~~--~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~ 221 (794)
.|+|+++.+. +...+|..+++|+||+|+|||||||++||+|.++ +..+++|.
T Consensus 7 ~W~l~~i~~~~~~~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~--------------------------~~~~~d~~ 60 (278)
T 2b6n_A 7 TWGIDRIDQRNLPLDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR--------------------------ASSGYDFI 60 (278)
T ss_dssp CHHHHHHTCSSSSCCSEEECSCCCTTCEEEEEESCCCTTCGGGTTC--------------------------EEEEEETT
T ss_pred CCCccccCCccCCcchhcccCCCCCCCEEEEEeCCCCCCChhHhcc--------------------------cccCeecC
Confidence 4555554432 3467899999999999999999999999999753 33445555
Q ss_pred cccccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHH
Q 038881 222 KGYAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILA 301 (794)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ 301 (794)
++ ..++.|..||||||||||+|.. .||||+|+|+.+|++++. | .+..+++++
T Consensus 61 ~~-----------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~--g-~~~~~~~~~ 112 (278)
T 2b6n_A 61 DN-----------DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCS--G-SGSNSGVIA 112 (278)
T ss_dssp TT-----------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT--S-CCCHHHHHH
T ss_pred CC-----------CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCC--C-CccHHHHHH
Confidence 43 2345788999999999999863 699999999999999876 3 468899999
Q ss_pred HHHHhHh--CCceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCC-cCCCCCceEEeccccCCCCcc
Q 038881 302 AFDMAIH--DGVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDST-VSNIAPWQITVGASTMDRDFP 378 (794)
Q Consensus 302 ai~~a~~--~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~-~~~~ap~vitVgAs~~~~~~~ 378 (794)
||+|+++ .+++|||||||... ...+..++.++.++|++||+||||+|...+. .+...+++|+|||++.+
T Consensus 113 ai~~a~~~~~g~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---- 184 (278)
T 2b6n_A 113 GINWVKNNASGPAVANMSLGGGA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN---- 184 (278)
T ss_dssp HHHHHHHHCCSSEEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT----
T ss_pred HHHHHHhCCCCCeEEEECCCCCc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC----
Confidence 9999997 59999999999863 4567788888999999999999999976543 35578999999986432
Q ss_pred ceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHH
Q 038881 379 SYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQAL 458 (794)
Q Consensus 379 ~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 458 (794)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCC
Q 038881 459 LAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVA 538 (794)
Q Consensus 459 ~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~ 538 (794)
+.++.||++||.+
T Consensus 185 -----------------------------------------------------------------~~~~~~S~~G~~~-- 197 (278)
T 2b6n_A 185 -----------------------------------------------------------------DSRSSFSNYGTCL-- 197 (278)
T ss_dssp -----------------------------------------------------------------SBBCTTCCBSTTC--
T ss_pred -----------------------------------------------------------------CCcCCcCCCCCCC--
Confidence 4678999999966
Q ss_pred CCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccc
Q 038881 539 PEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQ 618 (794)
Q Consensus 539 ~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~ 618 (794)
||+|||++|+++++... +.|..++|||||||||||++|||+|++|+|+++|||++|++||++.
T Consensus 198 ------di~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 198 ------DIYAPGSSITSSWYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp ------CEEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred ------eEEeCCCCeECcccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 99999999999986521 3789999999999999999999999999999999999999999874
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=7.8e-48 Score=408.48 Aligned_cols=249 Identities=27% Similarity=0.379 Sum_probs=209.6
Q ss_pred cccccccCCC--ccccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeec
Q 038881 143 EFLGLERNGR--VESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYF 220 (794)
Q Consensus 143 ~~~gl~~~~~--~~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~ 220 (794)
..|++.++.. .+...+|..+++|+||+|||||||||++||+|.++ +...++|
T Consensus 6 ~~W~l~~i~~~~~~~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~ 59 (276)
T 4dzt_A 6 APWGLDRIDQRDLPLSNSYTYTATGRGVNVYVIDTGIRTTHREFGGR--------------------------ARVGYDA 59 (276)
T ss_dssp CCHHHHHHTSSSSSCCSCEECSCCCTTCEEEEEESCCCTTCGGGTTC--------------------------EEEEEET
T ss_pred CCCChhhcCCccCCcccceecCCCCCCcEEEEEccCCCCCChhHccC--------------------------eeccccC
Confidence 3455554433 23568899999999999999999999999999753 3334444
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHH
Q 038881 221 NKGYAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADIL 300 (794)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~ 300 (794)
..+ ...|..||||||||||+|.. .||||+|+|+.+|++++. + .+....++
T Consensus 60 ~~~-------------~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~--~-~~~~~~~~ 109 (276)
T 4dzt_A 60 LGG-------------NGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCN--G-SGSTSGVI 109 (276)
T ss_dssp TSS-------------CSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT--S-CCCHHHHH
T ss_pred CCC-------------CCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCC--C-CcCHHHHH
Confidence 432 45678999999999999873 799999999999999877 3 47889999
Q ss_pred HHHHHhHhC--CceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCc-CCCCCceEEeccccCCCCc
Q 038881 301 AAFDMAIHD--GVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTV-SNIAPWQITVGASTMDRDF 377 (794)
Q Consensus 301 ~ai~~a~~~--g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~-~~~ap~vitVgAs~~~~~~ 377 (794)
++|+|+++. +++|||||||.. ....+..++.++.++|++||+||||+|...... +...+++|+|||++.+
T Consensus 110 ~ai~~~~~~~~~~~vin~S~g~~----~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--- 182 (276)
T 4dzt_A 110 AGVDWVTRNHRRPAVANMSLGGG----VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS--- 182 (276)
T ss_dssp HHHHHHHHHCCSSEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---
T ss_pred HHHHHHHhcCCCCeEEEECCCCC----CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC---
Confidence 999999986 999999999986 356688888899999999999999999765544 5578899999986432
Q ss_pred cceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHH
Q 038881 378 PSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQA 457 (794)
Q Consensus 378 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 457 (794)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCC
Q 038881 458 LLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSV 537 (794)
Q Consensus 458 ~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~ 537 (794)
+.++.||++||+.
T Consensus 183 ------------------------------------------------------------------~~~~~~S~~g~~~- 195 (276)
T 4dzt_A 183 ------------------------------------------------------------------DARASFSNYGSCV- 195 (276)
T ss_dssp ------------------------------------------------------------------SBBCTTCCBSTTC-
T ss_pred ------------------------------------------------------------------CCcCCcCCCCCCc-
Confidence 4778999999987
Q ss_pred CCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCcc
Q 038881 538 APEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASI 617 (794)
Q Consensus 538 ~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~ 617 (794)
||+|||++|+++++... ..|..++|||||||+|||++|||+|++|++++++||++|++||++
T Consensus 196 -------dv~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~ 257 (276)
T 4dzt_A 196 -------DLFAPGASIPSAWYTSD-----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATT 257 (276)
T ss_dssp -------CEEEECSSEEEECTTSS-----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEE
T ss_pred -------eEEeCCCCeEccccCCC-----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcC
Confidence 99999999999987632 378999999999999999999999999999999999999999998
Q ss_pred cc
Q 038881 618 QD 619 (794)
Q Consensus 618 ~~ 619 (794)
..
T Consensus 258 ~~ 259 (276)
T 4dzt_A 258 GR 259 (276)
T ss_dssp SC
T ss_pred Cc
Confidence 64
No 28
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=6.3e-48 Score=408.57 Aligned_cols=255 Identities=28% Similarity=0.364 Sum_probs=209.0
Q ss_pred cccccccCCCcc---ccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceee
Q 038881 143 EFLGLERNGRVE---SNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARY 219 (794)
Q Consensus 143 ~~~gl~~~~~~~---~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~ 219 (794)
..|+|+++.... ....|. ..+|+||+|+|||||||++||+|.++ +...++
T Consensus 6 ~~W~l~~i~~~~~~~~~~~~~-~~~G~gv~VaViDsGvd~~H~~l~~~--------------------------~~~~~~ 58 (279)
T 2pwa_A 6 APWGLARISSTSPGTSTYYYD-ESAGQGSCVYVIDTGIEASHPEFEGR--------------------------AQMVKT 58 (279)
T ss_dssp CCHHHHHHTCSSTTCCCEECC-TTTTTTEEEEEEESCCCTTCGGGTTC--------------------------EEEEEE
T ss_pred CCcChhhcCCCCccccccccc-CCCCCCCEEEEEeCCCCCCChhHhCc--------------------------cccccC
Confidence 345666554321 122454 37999999999999999999999753 333444
Q ss_pred cccccccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHH
Q 038881 220 FNKGYAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADI 299 (794)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i 299 (794)
|.+ .+.|..||||||||||+|.. .||||+|+|+.+|+++.. | .+..+++
T Consensus 59 ~~~--------------~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~--g-~~~~~~~ 107 (279)
T 2pwa_A 59 YYY--------------SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDN--G-SGQYSTI 107 (279)
T ss_dssp SSS--------------CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT--S-CCCHHHH
T ss_pred CCC--------------CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCC--C-CcCHHHH
Confidence 431 35678999999999999863 799999999999999876 3 4788999
Q ss_pred HHHHHHhHhCCc-------eEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCC-cCCCCCceEEeccc
Q 038881 300 LAAFDMAIHDGV-------DVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDST-VSNIAPWQITVGAS 371 (794)
Q Consensus 300 ~~ai~~a~~~g~-------dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~-~~~~ap~vitVgAs 371 (794)
++||+|++++++ +|||||||.. ....+..++.++.++|++||+||||+|..... ++...|++|+|||+
T Consensus 108 ~~ai~~a~~~~~~~~~~~~~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~ 183 (279)
T 2pwa_A 108 IAGMDFVASDKNNRNCPKGVVASLSLGGG----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGAS 183 (279)
T ss_dssp HHHHHHHHHHGGGSCCTTEEEEEECCCEE----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEE
T ss_pred HHHHHHHHhcCccccCCCccEEEecCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEe
Confidence 999999999887 9999999976 34678888889999999999999999976543 45578999999986
Q ss_pred cCCCCccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhh
Q 038881 372 TMDRDFPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARI 451 (794)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~ 451 (794)
+.+
T Consensus 184 ~~~----------------------------------------------------------------------------- 186 (279)
T 2pwa_A 184 DRY----------------------------------------------------------------------------- 186 (279)
T ss_dssp CTT-----------------------------------------------------------------------------
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 432
Q ss_pred hHHHHHHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccC
Q 038881 452 DKGQQALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSS 531 (794)
Q Consensus 452 ~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS 531 (794)
+.++.||+
T Consensus 187 ------------------------------------------------------------------------~~~~~~S~ 194 (279)
T 2pwa_A 187 ------------------------------------------------------------------------DRRSSFSN 194 (279)
T ss_dssp ------------------------------------------------------------------------SBBCTTCC
T ss_pred ------------------------------------------------------------------------CCcCCcCC
Confidence 46789999
Q ss_pred CCCCCCCCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHH
Q 038881 532 KGPSSVAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAI 611 (794)
Q Consensus 532 ~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L 611 (794)
|||.+ ||+|||++|+++++. +.|..++|||||||||||++|||+|+ |++++.|||++|
T Consensus 195 ~G~~~--------di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L 252 (279)
T 2pwa_A 195 YGSVL--------DIFGPGTDILSTWIG-------------GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYI 252 (279)
T ss_dssp BSTTC--------CEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHH
T ss_pred CCCcc--------eEEEecCCeEEeecC-------------CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHH
Confidence 99976 999999999999876 37899999999999999999999999 999999999999
Q ss_pred HhcCccccCCCcccccCCCCCCCCCccccccccc
Q 038881 612 MTTASIQDNNKGQILNASSYKATPFSYGAGHIQP 645 (794)
Q Consensus 612 ~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vn~ 645 (794)
++||++... ..+|+|..|+
T Consensus 253 ~~tA~~~~~---------------~~~~~g~~n~ 271 (279)
T 2pwa_A 253 ADTANKGDL---------------SNIPFGTVNL 271 (279)
T ss_dssp HHHSEESCC---------------BSCCTTSCCE
T ss_pred HHhCccccc---------------CCCCCCCccE
Confidence 999987521 2367777776
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.2e-46 Score=440.72 Aligned_cols=300 Identities=19% Similarity=0.178 Sum_probs=206.4
Q ss_pred cccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccccccccCCCCC
Q 038881 154 ESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKGYAAAVGPLNS 233 (794)
Q Consensus 154 ~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 233 (794)
++..+|..+++|+||+|||||||||++||+|.++ ...+.++|..+.
T Consensus 58 n~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~-------------------------~~~~~~~~~~~~--------- 103 (600)
T 2oxa_A 58 NLWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADN-------------------------VRPGSKNVVTGS--------- 103 (600)
T ss_dssp CCHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGG-------------------------BCSCCBCTTTCS---------
T ss_pred ChHHHHhcCCCCCCcEEEEecCCcCCCCcchhhc-------------------------cccCceeccCCC---------
Confidence 4678999999999999999999999999999753 112233444331
Q ss_pred CCCCCCC-CCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhHhCCce
Q 038881 234 SFDTPRD-KDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAIHDGVD 312 (794)
Q Consensus 234 ~~~~~~d-~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~~g~d 312 (794)
.+..+.| .+||||||||||||.. ++..+.||||+|+|+.+|+++....+ .....+++....+..++++
T Consensus 104 ~d~~p~d~~~gHGT~vAGiiaa~~---------n~~g~~GVAp~A~l~~vkv~~~~~~~--~~~~~~~~~~~~a~~~~~~ 172 (600)
T 2oxa_A 104 DDPTPTDPDTGHGTSVSGIIAAVD---------NAIGTKGIAPRAQLQGFNLLDDNSQQ--LQKDWLYALGDSNASRDNR 172 (600)
T ss_dssp SCCCCCSTTCCHHHHHHHHHHCCS---------SSSSCCCSSTTCEEEEECTTSTTCCC--CHHHHHHHTTTSHHHHTCS
T ss_pred CCCCCCCCCCCCccHHHHHhhccc---------CCCcceEEccCCceEEEeeecCcccc--hHHHHHHHHhhhhcccCCe
Confidence 0123344 7899999999999972 12235899999999999999876211 1123444444446778999
Q ss_pred EEEEccCCCCC-CCCCCH----HHHHHHH---HHhCCcEEEEecCCCCCCCC----------------------CcCCCC
Q 038881 313 VLSVSLGGGPS-KFFNDS----TAIGSFH---AVKHGMVVICSAGNSGPTDS----------------------TVSNIA 362 (794)
Q Consensus 313 VIN~SlG~~~~-~~~~~~----~~~a~~~---a~~~Gv~vV~AAGN~G~~~~----------------------~~~~~a 362 (794)
|||||||.... ....+. +..++.. +.++|++||+||||+|.... ...+.+
T Consensus 173 Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s 252 (600)
T 2oxa_A 173 VFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSN 252 (600)
T ss_dssp EEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGS
T ss_pred EEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccC
Confidence 99999998731 122222 2222222 45789999999999986311 111234
Q ss_pred CceEEeccccCCCCccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEE
Q 038881 363 PWQITVGASTMDRDFPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILV 442 (794)
Q Consensus 363 p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl 442 (794)
+|+|+|||++.
T Consensus 253 ~~vItVgA~~~--------------------------------------------------------------------- 263 (600)
T 2oxa_A 253 FWNLVVSALNA--------------------------------------------------------------------- 263 (600)
T ss_dssp SSEEEEEEECT---------------------------------------------------------------------
T ss_pred ceeEEEecccC---------------------------------------------------------------------
Confidence 55666666432
Q ss_pred EecCCchhhhHHHHHHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCC
Q 038881 443 CLRGDNARIDKGQQALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKP 522 (794)
Q Consensus 443 ~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~ 522 (794)
T Consensus 264 -------------------------------------------------------------------------------- 263 (600)
T 2oxa_A 264 -------------------------------------------------------------------------------- 263 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccCCCCCCCCCCcccCceEeCCceEEeeecC-------CCCCC--------------CCCCCCCCccceeeccc
Q 038881 523 APIMAAFSSKGPSSVAPEILKPDITAPGVTIIAAYTE-------AAGPT--------------NEDYDRRRIPFNALSGT 581 (794)
Q Consensus 523 ~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~Sa~~~-------~~~~~--------------~~~~~~~~~~y~~~sGT 581 (794)
.+.++.||++||+. ||+|||++|.+..+. ..... ....+...+.|..++||
T Consensus 264 ~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGT 335 (600)
T 2oxa_A 264 DGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGT 335 (600)
T ss_dssp TSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSH
T ss_pred CCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccc
Confidence 25788999999998 999999986443221 10000 00001112348999999
Q ss_pred cchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccccCCCcccc--------------------cCCCCCCCCCccccc
Q 038881 582 SMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQDNNKGQIL--------------------NASSYKATPFSYGAG 641 (794)
Q Consensus 582 SmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~--------------------~~~~~~~~~~~~G~G 641 (794)
|||||||||++|||+|++|+|+|++||++|++||++++..+.++. ........++.||||
T Consensus 336 S~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G 415 (600)
T 2oxa_A 336 SSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFG 415 (600)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTC
T ss_pred hHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCc
Confidence 999999999999999999999999999999999999865432211 011222346789999
Q ss_pred ccccccccCCCccc
Q 038881 642 HIQPNLAMDPGLVY 655 (794)
Q Consensus 642 ~vn~~~Al~~~lv~ 655 (794)
+||+.+|++....+
T Consensus 416 ~vda~~Av~~A~~~ 429 (600)
T 2oxa_A 416 LIDVNKALELAANH 429 (600)
T ss_dssp BCCHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHhc
Confidence 99999999865433
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.1e-46 Score=428.64 Aligned_cols=293 Identities=15% Similarity=0.151 Sum_probs=218.9
Q ss_pred cccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccccccccCCCCC
Q 038881 154 ESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKGYAAAVGPLNS 233 (794)
Q Consensus 154 ~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 233 (794)
++..+|..+++|+||+|||||||||++||+|.++- .....++|.++. ..+.
T Consensus 26 ~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~------------------------~~~~~~d~~~~~---~~p~-- 76 (471)
T 1p8j_A 26 NVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNY------------------------DPGASFDVNDQD---PDPQ-- 76 (471)
T ss_dssp CCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGB------------------------CGGGCEETTTTB---SCCC--
T ss_pred ChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhcc------------------------CccCcccccCCC---CCCC--
Confidence 47899999999999999999999999999997530 011234444321 0010
Q ss_pred CCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhHh-CCce
Q 038881 234 SFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAIH-DGVD 312 (794)
Q Consensus 234 ~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~-~g~d 312 (794)
+.....|.+||||||||||+|...+ +..+.||||+|+|+.+|+++ +..+++++|++++++ ++++
T Consensus 77 ~~~~~~d~~gHGT~vAGiiaa~~~n--------~~g~~GvAp~a~i~~~rv~~-------g~~~~~~~ai~~a~~~~~~~ 141 (471)
T 1p8j_A 77 PRYTQMNDNRHGTRCAGEVAAVANN--------GVCGVGVAYNARIGGVRMLD-------GEVTDAVEARSLGLNPNHIH 141 (471)
T ss_dssp CCCCTTCTTCHHHHHHHHHHCCSSS--------SSSCCCTTTTSEEEEEECSS-------SCCCHHHHHHHHTSCTTTCC
T ss_pred CccCCCCCCCcHHHHHHHHHeeccC--------CCCCEEECCCCeEEEEEccC-------CchhHHHHHHHhhhccCCCe
Confidence 1124568899999999999996421 22358999999999999985 246689999999999 9999
Q ss_pred EEEEccCCCCCC----CCCCHHHHHHHHHHh-----CCcEEEEecCCCCCCCCC----cCCCCCceEEeccccCCCCccc
Q 038881 313 VLSVSLGGGPSK----FFNDSTAIGSFHAVK-----HGMVVICSAGNSGPTDST----VSNIAPWQITVGASTMDRDFPS 379 (794)
Q Consensus 313 VIN~SlG~~~~~----~~~~~~~~a~~~a~~-----~Gv~vV~AAGN~G~~~~~----~~~~ap~vitVgAs~~~~~~~~ 379 (794)
|||||||..... .....+..++.++.+ +|++||+||||+|..... ....++++|+|||++.+
T Consensus 142 Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~----- 216 (471)
T 1p8j_A 142 IYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF----- 216 (471)
T ss_dssp EEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT-----
T ss_pred EEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC-----
Confidence 999999986321 112234445555543 699999999999975322 12356899999986432
Q ss_pred eEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHH
Q 038881 380 YVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALL 459 (794)
Q Consensus 380 ~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~ 459 (794)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCC
Q 038881 460 AGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAP 539 (794)
Q Consensus 460 ~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~ 539 (794)
+.++.||++||.. .
T Consensus 217 ----------------------------------------------------------------g~~a~~S~~g~~~--~ 230 (471)
T 1p8j_A 217 ----------------------------------------------------------------GNVPWYSEACSST--L 230 (471)
T ss_dssp ----------------------------------------------------------------SCCCTTCCBCTTC--C
T ss_pred ----------------------------------------------------------------CCcccccCCCCcc--e
Confidence 4678999999987 5
Q ss_pred CcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCcccc
Q 038881 540 EILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQD 619 (794)
Q Consensus 540 ~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~ 619 (794)
...+|...+||.+|+++.... ..|..++|||||||||||++|||+|++|+|++++||++|++||++++
T Consensus 231 ~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~ 298 (471)
T 1p8j_A 231 ATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAH 298 (471)
T ss_dssp EEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTT
T ss_pred EEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCC
Confidence 555666667778999997641 36899999999999999999999999999999999999999999876
Q ss_pred CCCcccccCCCCCCCCCcccccccccccccCCCc
Q 038881 620 NNKGQILNASSYKATPFSYGAGHIQPNLAMDPGL 653 (794)
Q Consensus 620 ~~g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l 653 (794)
.....+.........+..||+|+||+.+|++...
T Consensus 299 ~~~~~~~~n~~g~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 299 LNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp CCCSCCEECTTSCEEBTTTBTCBCCHHHHHHHHH
T ss_pred CCCCCceecCCCcccCCCCCCEEEcHhHHHHHhh
Confidence 4332222111122345789999999999998543
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=3e-46 Score=420.57 Aligned_cols=291 Identities=20% Similarity=0.228 Sum_probs=208.5
Q ss_pred cccccCCCcc-ccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccc
Q 038881 145 LGLERNGRVE-SNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKG 223 (794)
Q Consensus 145 ~gl~~~~~~~-~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~ 223 (794)
|+|+++.+.. ....|..+++|+||+|+|||||||++||+|.++- ....+.+..+
T Consensus 4 WgL~rI~~~~~~~~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~-------------------------~~~~~~~v~~ 58 (546)
T 2qtw_B 4 WNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV-------------------------MVTDFENVPE 58 (546)
T ss_dssp HHHHHTSCSSCC--------CCTTSEEEEEESCCCTTSTTTTTTE-------------------------EEEEEECCCC
T ss_pred CChhhcCCCcccchhcccCCCCCCcEEEEECCCCCCCChHHcccc-------------------------cccCcccccC
Confidence 5676665432 2347888999999999999999999999997540 0011111110
Q ss_pred cccccCCCCCCCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHH
Q 038881 224 YAAAVGPLNSSFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAF 303 (794)
Q Consensus 224 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai 303 (794)
. .+. .......|..||||||||||+|+. .||||+|+|+.+|+++.+ | .++.+++++||
T Consensus 59 ~---dg~--~f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~--G-~g~~s~ii~ai 116 (546)
T 2qtw_B 59 E---DGT--RFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQ--G-KGTVSGTLIGL 116 (546)
T ss_dssp C---C---------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT--S-EEEHHHHHHHH
T ss_pred C---CCc--cccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCC--C-CcCHHHHHHHH
Confidence 0 000 001245688999999999999874 699999999999999876 4 46789999999
Q ss_pred HHhHhC------CceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCc-CCCCCceEEeccccCCCC
Q 038881 304 DMAIHD------GVDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTV-SNIAPWQITVGASTMDRD 376 (794)
Q Consensus 304 ~~a~~~------g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~-~~~ap~vitVgAs~~~~~ 376 (794)
+|+++. +++|||||||+. +...+..++.++.++|++||+||||+|.+.... +...|++|+|||++.+..
T Consensus 117 ~~a~~~~~~~~~g~~VINmSlGg~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~ 192 (546)
T 2qtw_B 117 EFIRKSQLVQPVGPLVVLLPLAGG----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQ 192 (546)
T ss_dssp HHHHHHHHHSCCSCEEEEECEEEE----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSC
T ss_pred HHHHHhhhhccCCCeEEEecCCCC----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCC
Confidence 999974 899999999975 345678888899999999999999999765433 557899999999764320
Q ss_pred ccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHH
Q 038881 377 FPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQ 456 (794)
Q Consensus 377 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~ 456 (794)
.
T Consensus 193 ~------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 193 P------------------------------------------------------------------------------- 193 (546)
T ss_dssp B-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCC
Q 038881 457 ALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSS 536 (794)
Q Consensus 457 ~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~ 536 (794)
...-..||++|+.+
T Consensus 194 ------------------------------------------------------------------a~~s~~fSn~G~~v 207 (546)
T 2qtw_B 194 ------------------------------------------------------------------VTLGTLGTNFGRCV 207 (546)
T ss_dssp ------------------------------------------------------------------CEETTEECCBSTTC
T ss_pred ------------------------------------------------------------------ccccCCcCCCCCcc
Confidence 00011389999855
Q ss_pred CCCCcccCceEeCCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCc
Q 038881 537 VAPEILKPDITAPGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTAS 616 (794)
Q Consensus 537 ~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~ 616 (794)
||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|+|||++|++||.
T Consensus 208 --------DI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt 268 (546)
T 2qtw_B 208 --------DLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSA 268 (546)
T ss_dssp --------CEEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSE
T ss_pred --------eEEecCccEEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcc
Confidence 99999999999987632 37899999999999999999999999999999999999999997
Q ss_pred cccCCCcccc------cCC---CCCCCCCcccccc--cccccccC
Q 038881 617 IQDNNKGQIL------NAS---SYKATPFSYGAGH--IQPNLAMD 650 (794)
Q Consensus 617 ~~~~~g~~~~------~~~---~~~~~~~~~G~G~--vn~~~Al~ 650 (794)
+.......+. ... ..+.....+|+|+ .++..+..
T Consensus 269 ~~~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 269 KDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp ESCSCGGGSCHHHHTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred ccccCCccCccccCCCCccchhccCCcccccCCCcchhchhccCC
Confidence 6432211110 000 1111456688998 88887775
No 32
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=6.3e-46 Score=425.23 Aligned_cols=285 Identities=18% Similarity=0.210 Sum_probs=217.6
Q ss_pred cccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccccccccCCCCC
Q 038881 154 ESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKGYAAAVGPLNS 233 (794)
Q Consensus 154 ~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 233 (794)
++..+|..+++|+||+|||||||||++||+|.++- ...++++|.++. .
T Consensus 42 ~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~------------------------~~~~~~d~~~~~--------~ 89 (503)
T 2id4_A 42 NVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF------------------------CAEGSWDFNDNT--------N 89 (503)
T ss_dssp CCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB------------------------CGGGCEETTTTB--------S
T ss_pred ChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc------------------------cccCcccCCCCC--------C
Confidence 46789999999999999999999999999997541 011234554331 0
Q ss_pred CCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhHhCCceE
Q 038881 234 SFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAIHDGVDV 313 (794)
Q Consensus 234 ~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~~g~dV 313 (794)
......|.+||||||||||+|...+ +..+.||||+|+|+.+|+++.. +...++++||+|+++++ +|
T Consensus 90 ~~~p~~d~~gHGT~vAGiiaa~~~n--------~~~~~GvAp~a~i~~~rv~~~~-----~~~~~~~~ai~~a~~~~-~I 155 (503)
T 2id4_A 90 LPKPRLSDDYHGTRCAGEIAAKKGN--------NFCGVGVGYNAKISGIRILSGD-----ITTEDEAASLIYGLDVN-DI 155 (503)
T ss_dssp CCCCCSTTTTHHHHHHHHHHCCSSS--------SSSCCCTTTTSEEEEEECTTSC-----CCHHHHHHHTTTTTTTC-SE
T ss_pred CCCCCCCCCChHHHHHHHHHhccCC--------CCCcEEECCCCEEEEEEeeCCC-----CChHHHHHHHHhHhhcC-CE
Confidence 0122357889999999999997422 2234899999999999999743 67889999999999988 99
Q ss_pred EEEccCCCCCC-C---CCCHHHHHHHHHH-----hCCcEEEEecCCCCCCCC--CcC--CCCCceEEeccccCCCCccce
Q 038881 314 LSVSLGGGPSK-F---FNDSTAIGSFHAV-----KHGMVVICSAGNSGPTDS--TVS--NIAPWQITVGASTMDRDFPSY 380 (794)
Q Consensus 314 IN~SlG~~~~~-~---~~~~~~~a~~~a~-----~~Gv~vV~AAGN~G~~~~--~~~--~~ap~vitVgAs~~~~~~~~~ 380 (794)
||||||..... . ....+..++.++. .+|++||+||||+|.... .++ ..++++|+|||++.+
T Consensus 156 in~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~------ 229 (503)
T 2id4_A 156 YSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK------ 229 (503)
T ss_dssp EEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT------
T ss_pred EEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC------
Confidence 99999986321 1 2234566666665 479999999999996532 222 256789999986432
Q ss_pred EEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHc
Q 038881 381 VVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLA 460 (794)
Q Consensus 381 ~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~ 460 (794)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCC
Q 038881 461 GAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPE 540 (794)
Q Consensus 461 Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~ 540 (794)
+.++.||++||..
T Consensus 230 ---------------------------------------------------------------~~~a~~S~~g~~~---- 242 (503)
T 2id4_A 230 ---------------------------------------------------------------DLHPPYSEGCSAV---- 242 (503)
T ss_dssp ---------------------------------------------------------------SCCCTTCCCCTTE----
T ss_pred ---------------------------------------------------------------CCcCCcCCCCCcc----
Confidence 4678999999988
Q ss_pred cccCceEe----CCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCc
Q 038881 541 ILKPDITA----PGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTAS 616 (794)
Q Consensus 541 ~~KPDI~A----PG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~ 616 (794)
|++| ||..|+++.... +.|..++|||||||||||++|||+|++|+|++++||++|++||+
T Consensus 243 ----~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 306 (503)
T 2id4_A 243 ----MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAV 306 (503)
T ss_dssp ----EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCB
T ss_pred ----eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccc
Confidence 8887 899999995431 47999999999999999999999999999999999999999999
Q ss_pred cccCC-CcccccCCCCCCCCCcccccccccccccCCCc
Q 038881 617 IQDNN-KGQILNASSYKATPFSYGAGHIQPNLAMDPGL 653 (794)
Q Consensus 617 ~~~~~-g~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l 653 (794)
++... ...+.........+..||+|+||+.+|++...
T Consensus 307 ~~~~~~~~~~~~~~~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 307 GLEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp CCTTCGGGCCEECSSSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred cCCCCcCCCceecCCCCccCcccCCcEecHHHHHHHHh
Confidence 87643 11111111122345689999999999998543
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=7e-46 Score=394.07 Aligned_cols=230 Identities=28% Similarity=0.391 Sum_probs=197.2
Q ss_pred ccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccccccccCCCCCCCC
Q 038881 157 SIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKGYAAAVGPLNSSFD 236 (794)
Q Consensus 157 ~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 236 (794)
.+|... +|+||+|||||||||++||+|.++ +...+.|..+
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~~------------- 63 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEGR--------------------------AKQIKSYAST------------- 63 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTTC--------------------------EEEEEECSSS-------------
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhccc--------------------------cccccCCCCC-------------
Confidence 566665 999999999999999999999753 3334444432
Q ss_pred CCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhHhCC------
Q 038881 237 TPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAIHDG------ 310 (794)
Q Consensus 237 ~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~~g------ 310 (794)
..|..||||||||||+|+. .||||+|+|+.+|+++.. | .+..++++++|+|+++++
T Consensus 64 -~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~--~-~~~~~~~~~ai~~~~~~~~~~~~~ 125 (279)
T 3f7m_A 64 -ARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDS--G-SGSLSNIIAGMDFVASDRQSRNCP 125 (279)
T ss_dssp -SSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT--S-CCCHHHHHHHHHHHHHHGGGSCCT
T ss_pred -CCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCC--C-CcCHHHHHHHHHHHHhccccccCC
Confidence 2378999999999999863 799999999999999876 3 478899999999999876
Q ss_pred -ceEEEEccCCCCCCCCCCHHHHHHHHHHhCCcEEEEecCCCCCCCCCc-CCCCCceEEeccccCCCCccceEEecCCeE
Q 038881 311 -VDVLSVSLGGGPSKFFNDSTAIGSFHAVKHGMVVICSAGNSGPTDSTV-SNIAPWQITVGASTMDRDFPSYVVVSNNKR 388 (794)
Q Consensus 311 -~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~-~~~ap~vitVgAs~~~~~~~~~~~~~~~~~ 388 (794)
++|||||||.. ....+..++.++.++|++||+||||+|...... +...+++|+|||++.+
T Consensus 126 ~~~Vin~S~g~~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~-------------- 187 (279)
T 3f7m_A 126 RRTVASMSLGGG----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN-------------- 187 (279)
T ss_dssp TEEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT--------------
T ss_pred CCeEEEeCCCcC----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC--------------
Confidence 99999999976 456788888899999999999999999765444 4577999999986432
Q ss_pred EeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEEEecCCchhhhHHHHHHHcCceEEEEe
Q 038881 389 YKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLA 468 (794)
Q Consensus 389 ~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~ 468 (794)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCCCCccccccCCCCCCCCCCcccCceEe
Q 038881 469 NAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKPAPIMAAFSSKGPSSVAPEILKPDITA 548 (794)
Q Consensus 469 n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~A 548 (794)
+.++.||++||.+ ||+|
T Consensus 188 -------------------------------------------------------~~~~~~S~~g~~~--------di~A 204 (279)
T 3f7m_A 188 -------------------------------------------------------DVRSTFSNYGRVV--------DIFA 204 (279)
T ss_dssp -------------------------------------------------------SBBCTTCCBSTTC--------CEEE
T ss_pred -------------------------------------------------------CCCCCCCCCCCCC--------eEEE
Confidence 4778999999976 9999
Q ss_pred CCceEEeeecCCCCCCCCCCCCCCccceeeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCcccc
Q 038881 549 PGVTIIAAYTEAAGPTNEDYDRRRIPFNALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQD 619 (794)
Q Consensus 549 PG~~I~Sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~ 619 (794)
||++|+++++. +.|..++|||||||+|||++|||+|++|. ++++||++|++||++..
T Consensus 205 pG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 205 PGTSITSTWIG-------------GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp ECSSEEEECGG-------------GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred CCCCeEeecCC-------------CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 99999999876 47899999999999999999999999999 99999999999998753
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=7.7e-44 Score=418.58 Aligned_cols=298 Identities=19% Similarity=0.176 Sum_probs=202.9
Q ss_pred cccccccccCCCCceEEEEecCCCCCCCCCCcCCCCCCCCCccccccccCCCccccccccccceeecccccccccCCCCC
Q 038881 154 ESNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEGLGPIPSKWKGICENDKDAKFLCNRKLIGARYFNKGYAAAVGPLNS 233 (794)
Q Consensus 154 ~~~~~~~~g~~G~GV~VaVIDTGId~~Hp~f~~~g~~~~~~~~~g~~~~g~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 233 (794)
++..+|..+++|+||+|||||||||++||||.++ ...+.++|.++. .
T Consensus 58 nv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n-------------------------~~~~~~~~~~~~------~-- 104 (600)
T 3hjr_A 58 NLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN-------------------------VRPGSKNVVTGS------D-- 104 (600)
T ss_dssp CCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG-------------------------BCSCCBCTTTSS------S--
T ss_pred CHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc-------------------------cccCcceeecCC------C--
Confidence 4678999999999999999999999999999753 011223343321 0
Q ss_pred CCCCCCCCCCCCcceeecccccccccccccccCCCcccccCCCceEEEEEeecCCCCCCCCChHHHHHHH-HHhHhCCce
Q 038881 234 SFDTPRDKDGHGTHTLSTAGGNFVAKASVFGLGKGTAKGGSPKARVAAYKVCWPPVTGNECYDADILAAF-DMAIHDGVD 312 (794)
Q Consensus 234 ~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai-~~a~~~g~d 312 (794)
+.....|.+||||||||||||.. + +..+.||||+|+|+.+|++++. + .+..++++.|+ +++..++++
T Consensus 105 dp~p~~~~~gHGThVAGiIAa~~----n-----~~g~~GVAp~A~l~~~rvl~~~--~-~~~~~~~~~a~~~~~~~~~~~ 172 (600)
T 3hjr_A 105 DPTPTDPDTAHGTSVSGIIAAVD----N-----AIGTKGIAPRAQLQGFNLLDDN--S-QQLQKDWLYALGDSNASRDNR 172 (600)
T ss_dssp CCCCCSTTCCHHHHHHHHHHCCS----S-----SSSCCCSSTTCEEEEECTTSTT--C-CCCHHHHHHHTTSSHHHHTCS
T ss_pred CCCCCCCCCChHHHHHHHHhEeC----C-----CCCcEEeCCCCEEEEEEeecCC--C-CccHHHHHHHhhhhhhhcCCC
Confidence 11233467899999999999863 1 2224899999999999999876 3 45677777776 567778999
Q ss_pred EEEEccCCCC-CCCCCCHH-----HHHHHH--HHhCCcEEEEecCCCCCCCCCc----------------------CCCC
Q 038881 313 VLSVSLGGGP-SKFFNDST-----AIGSFH--AVKHGMVVICSAGNSGPTDSTV----------------------SNIA 362 (794)
Q Consensus 313 VIN~SlG~~~-~~~~~~~~-----~~a~~~--a~~~Gv~vV~AAGN~G~~~~~~----------------------~~~a 362 (794)
|||+|||... .....+.. ..++.. ...+|+++|+||||.+...... ...+
T Consensus 173 I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~ 252 (600)
T 3hjr_A 173 VFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSN 252 (600)
T ss_dssp EEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGS
T ss_pred EEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCcccc
Confidence 9999999762 11222221 122221 2367999999999976321000 0011
Q ss_pred CceEEeccccCCCCccceEEecCCeEEeeeecCCCCCCCCceeceEEccchhhcccchhhccccCCCCCCCCCccceEEE
Q 038881 363 PWQITVGASTMDRDFPSYVVVSNNKRYKGQSLSSKGLPSNKLFPLISAADAKAANASTEVALLCEAGTLDPKKVKGKILV 442 (794)
Q Consensus 363 p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl 442 (794)
+++|+|||+
T Consensus 253 ~~~IsVgA~----------------------------------------------------------------------- 261 (600)
T 3hjr_A 253 FWNLVVSAL----------------------------------------------------------------------- 261 (600)
T ss_dssp SSEEEEEEE-----------------------------------------------------------------------
T ss_pred CcceEEeee-----------------------------------------------------------------------
Confidence 223333322
Q ss_pred EecCCchhhhHHHHHHHcCceEEEEeccCCCCccccCCCCcccEEEEeccchHHHHHHHhcCCCcEEEEEeceeeecCCC
Q 038881 443 CLRGDNARIDKGQQALLAGAVGMVLANAQENGNELLADPHLLPASHINFTDGADLFRDVNSTKRPVGYLTRATTELGLKP 522 (794)
Q Consensus 443 ~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~ 522 (794)
..
T Consensus 262 ------------------------------------------------------------------------------~~ 263 (600)
T 3hjr_A 262 ------------------------------------------------------------------------------NA 263 (600)
T ss_dssp ------------------------------------------------------------------------------CT
T ss_pred ------------------------------------------------------------------------------cC
Confidence 12
Q ss_pred CCccccccCCCCCCCCCCcccCceEeCCceE--------EeeecCCCCCC-------------CCCCCCCCccceeeccc
Q 038881 523 APIMAAFSSKGPSSVAPEILKPDITAPGVTI--------IAAYTEAAGPT-------------NEDYDRRRIPFNALSGT 581 (794)
Q Consensus 523 ~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I--------~Sa~~~~~~~~-------------~~~~~~~~~~y~~~sGT 581 (794)
.+.++.||++|+.. +++|||..+ .+..++..... ..........|..++||
T Consensus 264 ~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGT 335 (600)
T 3hjr_A 264 DGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGT 335 (600)
T ss_dssp TSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSH
T ss_pred CCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccc
Confidence 36788999999988 999999762 22222211000 00111223468899999
Q ss_pred cchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcCccccCCCccccc--------------------CCCCCCCCCccccc
Q 038881 582 SMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASIQDNNKGQILN--------------------ASSYKATPFSYGAG 641 (794)
Q Consensus 582 SmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~~--------------------~~~~~~~~~~~G~G 641 (794)
|||||||||++|||+|++|+|+++|||++|++||++++....|+.. ..........||+|
T Consensus 336 SmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG 415 (600)
T 3hjr_A 336 SSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFG 415 (600)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTC
T ss_pred cccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccCCc
Confidence 9999999999999999999999999999999999999876655321 11112235579999
Q ss_pred ccccccccCCCc
Q 038881 642 HIQPNLAMDPGL 653 (794)
Q Consensus 642 ~vn~~~Al~~~l 653 (794)
+||+.+|++...
T Consensus 416 ~vDA~~aV~~A~ 427 (600)
T 3hjr_A 416 LIDVNKALELAA 427 (600)
T ss_dssp BCCHHHHHHHHT
T ss_pred eecHHHHHHHhh
Confidence 999999997543
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=4.3e-25 Score=253.32 Aligned_cols=97 Identities=27% Similarity=0.430 Sum_probs=76.9
Q ss_pred cccccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhHh---CCceEEEEccCCCCCCC---CCCHHHHHHHHHHhCCc
Q 038881 269 TAKGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAIH---DGVDVLSVSLGGGPSKF---FNDSTAIGSFHAVKHGM 342 (794)
Q Consensus 269 ~~~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~---~g~dVIN~SlG~~~~~~---~~~~~~~a~~~a~~~Gv 342 (794)
.+.||||+|+|+.|++. ...+.++++|+||++ ++++|||||||.....+ +...+..++.+|..+||
T Consensus 273 ~~~gvAp~a~i~~~~~~--------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi 344 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP--------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGV 344 (552)
T ss_dssp HHHHHCTTSEEEEEECC--------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred hhhccCCCCeEEEEEcC--------CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCe
Confidence 45899999999999972 246789999999998 79999999999873211 12346666777889999
Q ss_pred EEEEecCCCCCCC--------CCcCCCCCceEEeccccC
Q 038881 343 VVICSAGNSGPTD--------STVSNIAPWQITVGASTM 373 (794)
Q Consensus 343 ~vV~AAGN~G~~~--------~~~~~~ap~vitVgAs~~ 373 (794)
+||+||||+|... ..++..+|+|++||+++.
T Consensus 345 ~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 345 TVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp EEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred EEEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 9999999999653 234467899999999754
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=9.9e-22 Score=214.90 Aligned_cols=99 Identities=18% Similarity=0.195 Sum_probs=79.0
Q ss_pred cccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhHh-CCceEEEEccCCCCC----CCCCCHHHHHHHHHHhCCcEEE
Q 038881 271 KGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAIH-DGVDVLSVSLGGGPS----KFFNDSTAIGSFHAVKHGMVVI 345 (794)
Q Consensus 271 ~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~~-~g~dVIN~SlG~~~~----~~~~~~~~~a~~~a~~~Gv~vV 345 (794)
..+||+++++.|++.+.. + +..++++++|+||++ ++++|||||||.... ..+.+.+..++.+|..+||+||
T Consensus 90 g~~aP~a~~~~~~~~~~~--~--~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv 165 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQS--A--SGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFS 165 (372)
T ss_dssp HHTTSCEEEEEEEEECTT--S--STTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEE
T ss_pred hhcCCCCcEEEEEeCCCC--C--cccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEE
Confidence 457999999999998654 2 678899999999998 899999999998621 1123456677777889999999
Q ss_pred EecCCCCCCCC-------------CcCCCCCceEEeccccC
Q 038881 346 CSAGNSGPTDS-------------TVSNIAPWQITVGASTM 373 (794)
Q Consensus 346 ~AAGN~G~~~~-------------~~~~~ap~vitVgAs~~ 373 (794)
+||||+|...+ .++..+|+|++||+++.
T Consensus 166 ~AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 166 VSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp EECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred EEECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 99999997643 23457899999999764
No 37
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.09 E-value=9.7e-11 Score=105.49 Aligned_cols=81 Identities=14% Similarity=0.012 Sum_probs=68.7
Q ss_pred cccCCccEEEEeCCCCCCCCccccccccchHHHHHHHHHhcCCCCCCCcceEEEecceeeeEEEEeCHHHHHHHHcCCCe
Q 038881 46 FSMLQTHHCCQKGAHSHGPELSAVDLHRVTESHYEFLGSFLHGNDNPEDAIFYSYTRHINGFAAKLDDAVAAEIAKHPKV 125 (794)
Q Consensus 46 ~~~~~~~YIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ng~s~~~~~~~i~~L~~~p~V 125 (794)
...+|++|||+|++.... .....|.+|+.+++.+ .....++.|.|++.|+||+++|+++++++|+++|+|
T Consensus 33 ~~~ip~~YIV~lk~~~~~---------~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V 102 (114)
T 2w2n_P 33 PWRLPGTYVVVLKEETHL---------SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHV 102 (114)
T ss_dssp GGEEEEEEEEEECTTCCH---------HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTE
T ss_pred ccCCCCcEEEEECCCCCH---------HHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCc
Confidence 357899999999987532 4556889999988764 234578999999999999999999999999999999
Q ss_pred EEEEecceecc
Q 038881 126 VSVFLNQGRKL 136 (794)
Q Consensus 126 ~~v~~~~~~~~ 136 (794)
.+||+|+.++.
T Consensus 103 ~~VE~D~~v~~ 113 (114)
T 2w2n_P 103 DYIEEDSSVFA 113 (114)
T ss_dssp EEEEEEEEEEE
T ss_pred cEEEeCceEec
Confidence 99999998764
No 38
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.00 E-value=6.9e-10 Score=126.41 Aligned_cols=98 Identities=16% Similarity=0.211 Sum_probs=63.2
Q ss_pred cccCCCceEEEEEeecCCCCCCCCChHHHHHHHHHhH--hCCceEEEEccCCCCCCC---CCCHHHHHHHHHHhCCcEEE
Q 038881 271 KGGSPKARVAAYKVCWPPVTGNECYDADILAAFDMAI--HDGVDVLSVSLGGGPSKF---FNDSTAIGSFHAVKHGMVVI 345 (794)
Q Consensus 271 ~GvAP~A~L~~~kv~~~~~~G~~~~~~~i~~ai~~a~--~~g~dVIN~SlG~~~~~~---~~~~~~~a~~~a~~~Gv~vV 345 (794)
.++++...++.+-..+.. ...+.++..+++.. .+.++|||+|||...... +...+...+.++..+||.|+
T Consensus 262 ~a~~~~i~~~~~~~~g~~-----~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~ 336 (544)
T 3edy_A 262 MSAGANISTWVYSSPGRH-----EGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLL 336 (544)
T ss_dssp HHHSTTSEEEEECCCSCC-----TTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hccCCCceEEEEecCCcc-----cccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEE
Confidence 455666666655432111 12234555454433 356899999999973211 22335555667889999999
Q ss_pred EecCCCCCCC----------CCcCCCCCceEEeccccC
Q 038881 346 CSAGNSGPTD----------STVSNIAPWQITVGASTM 373 (794)
Q Consensus 346 ~AAGN~G~~~----------~~~~~~ap~vitVgAs~~ 373 (794)
+|+||+|... ..+++.+|||++||+++.
T Consensus 337 ~ASGD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 337 FASGDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp EECCSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred EecCCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 9999999643 134567899999999764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=99.00 E-value=1.4e-09 Score=91.62 Aligned_cols=75 Identities=11% Similarity=0.083 Sum_probs=57.3
Q ss_pred ccCCccEEEEeCCCCCCCCccccccccchHHHHHHHHHhcCCCCCCCcceEEEecceeeeEEEEeCHHHHHHHHcCCCeE
Q 038881 47 SMLQTHHCCQKGAHSHGPELSAVDLHRVTESHYEFLGSFLHGNDNPEDAIFYSYTRHINGFAAKLDDAVAAEIAKHPKVV 126 (794)
Q Consensus 47 ~~~~~~YIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ng~s~~~~~~~i~~L~~~p~V~ 126 (794)
..+|++|||+||++... . ..+..+++. ...++.++|++ |+||+++++++++++|+++|+|.
T Consensus 5 ~~i~~~YIV~~k~~~~~---------~--~~~~~~~~~-------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~ 65 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKS---------C--AKKEDVISE-------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVA 65 (80)
T ss_dssp ---CCEEEEEECTTCCS---------H--HHHHHHHHT-------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEE
T ss_pred ccCCCCEEEEECCCCCh---------H--HHHHHHHHH-------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCcc
Confidence 46899999999997643 1 112222221 23689999998 99999999999999999999999
Q ss_pred EEEecceecccccC
Q 038881 127 SVFLNQGRKLHTTH 140 (794)
Q Consensus 127 ~v~~~~~~~~~~~~ 140 (794)
+||+|+.++++++.
T Consensus 66 ~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 66 YVEEDKLYRALSAT 79 (80)
T ss_dssp EEEECCEEEECCC-
T ss_pred EEEeCcEEEEeeec
Confidence 99999999887653
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.99 E-value=4e-10 Score=102.69 Aligned_cols=94 Identities=12% Similarity=-0.046 Sum_probs=69.1
Q ss_pred ccccccchhhc-cccccCCccEEEEeCCCCCCCCccccccccchHHHHHHHHHhcCCCCCCCcceEEEecceeeeEEEEe
Q 038881 33 FKSFPFPLILS-FLFSMLQTHHCCQKGAHSHGPELSAVDLHRVTESHYEFLGSFLHGNDNPEDAIFYSYTRHINGFAAKL 111 (794)
Q Consensus 33 ~~~~~~~~~~~-~~~~~~~~~YIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ng~s~~~ 111 (794)
.....+|++.. .....+|++|||+||++... .....|.+++.+++.+. ....++.|.|++.|+||++++
T Consensus 29 ~~~~~Apl~~~~~~~~~Ip~~YIV~~K~~~~~---------~~~~~~~~~l~~~~~~r-~~g~~i~~~Y~~~~~GFaa~l 98 (124)
T 2qtw_A 29 EHGTTATFHRCAKDPWRLPGTYVVVLKEETHL---------SQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKM 98 (124)
T ss_dssp ----CCEEECCSSGGGEEEEEEEEEECTTCCH---------HHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEEC
T ss_pred cccccccccccCCcccCCCCCEEEEECCCCCH---------HHHHHHHHHHHHHHhhc-ccCCceEEEecccceEEEEEc
Confidence 44456666554 34567999999999997643 33455666665543221 134689999999999999999
Q ss_pred CHHHHHHHHcCCCeEEEEecceecc
Q 038881 112 DDAVAAEIAKHPKVVSVFLNQGRKL 136 (794)
Q Consensus 112 ~~~~i~~L~~~p~V~~v~~~~~~~~ 136 (794)
+++++++|+++|+|.+|++|+.++.
T Consensus 99 ~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 99 SGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp CGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CHHHHHHHHcCCCCcEEEeCceEec
Confidence 9999999999999999999998764
No 41
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.74 E-value=3.8e-08 Score=96.10 Aligned_cols=94 Identities=18% Similarity=0.120 Sum_probs=75.9
Q ss_pred hccccCCCCCCCCC-------ccceEEEEecCC-chhhhHHHHHHHcCceEEEEeccCCCCccc----cCCCCcccEEEE
Q 038881 422 VALLCEAGTLDPKK-------VKGKILVCLRGD-NARIDKGQQALLAGAVGMVLANAQENGNEL----LADPHLLPASHI 489 (794)
Q Consensus 422 ~~~~c~~~~~~~~~-------~~gkivl~~~g~-~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~~----~~~~~~~p~~~i 489 (794)
+...|.+..+.... .++||+|++||. |+|.+|..+|+++||.++|+||+...+... ......+|+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 45789887653222 579999999999 999999999999999999999985322211 122357999999
Q ss_pred eccchHHHHHHHhcCCCcEEEEEece
Q 038881 490 NFTDGADLFRDVNSTKRPVGYLTRAT 515 (794)
Q Consensus 490 ~~~~g~~l~~~~~~~~~~~~~i~~~~ 515 (794)
+..+|+.|++++..+...+++|....
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999988888887764
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.73 E-value=2.5e-08 Score=82.85 Aligned_cols=70 Identities=10% Similarity=-0.006 Sum_probs=58.5
Q ss_pred ccEEEEeCCCCCCCCccccccccchHHHHHHHHHhcCCCCCCCcceEEEec-ceeeeEEEEeCHHHHHHHHcC--CCeEE
Q 038881 51 THHCCQKGAHSHGPELSAVDLHRVTESHYEFLGSFLHGNDNPEDAIFYSYT-RHINGFAAKLDDAVAAEIAKH--PKVVS 127 (794)
Q Consensus 51 ~~YIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~-~~~ng~s~~~~~~~i~~L~~~--p~V~~ 127 (794)
++|||+||++.+. ...+.|.+++...- .++.+.|. ..|+||+++++++.+++|+++ |.|.+
T Consensus 3 ~sYIV~lk~~~~~---------~~~~~~~~~~~~~g-------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~ 66 (76)
T 1v5i_B 3 GKFIVIFKNDVSE---------DKIRETKDEVIAEG-------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDS 66 (76)
T ss_dssp EEEEEEECTTCCH---------HHHHHHHHHHHHHT-------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEE
T ss_pred ceEEEEECCCCCH---------HHHHHHHHHHHhhC-------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcE
Confidence 6899999997643 45567777777652 46889994 799999999999999999999 89999
Q ss_pred EEecceecc
Q 038881 128 VFLNQGRKL 136 (794)
Q Consensus 128 v~~~~~~~~ 136 (794)
||+|+.+++
T Consensus 67 VE~D~~v~~ 75 (76)
T 1v5i_B 67 IEEDHVAHA 75 (76)
T ss_dssp EEECCEEEC
T ss_pred EcCCcEEeC
Confidence 999998764
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.32 E-value=0.00028 Score=56.22 Aligned_cols=42 Identities=17% Similarity=0.277 Sum_probs=38.9
Q ss_pred CcceEEEecceeeeEEEEeCHHHHHHHHcCCCeEEEEecceec
Q 038881 93 EDAIFYSYTRHINGFAAKLDDAVAAEIAKHPKVVSVFLNQGRK 135 (794)
Q Consensus 93 ~~~~~~~y~~~~ng~s~~~~~~~i~~L~~~p~V~~v~~~~~~~ 135 (794)
+.++.++|. .+++++++++.+.++.|+++|+|++||+|...+
T Consensus 22 gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 22 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp TCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred CCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 478999998 899999999999999999999999999998764
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.83 E-value=0.0028 Score=70.29 Aligned_cols=73 Identities=25% Similarity=0.334 Sum_probs=59.8
Q ss_pred CCCCCCccceEEEEecCCchhhhHHHHHHHcCceEEEEeccCCCCcc--cc-CCCCcccEEEEeccchHHHHHHHh
Q 038881 430 TLDPKKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLANAQENGNE--LL-ADPHLLPASHINFTDGADLFRDVN 502 (794)
Q Consensus 430 ~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~~--~~-~~~~~~p~~~i~~~~g~~l~~~~~ 502 (794)
++...+++|||||++++.|.|..|..+|+++||.|+|++++...... +. .....+|++.|+.++++.|..++.
T Consensus 107 D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 107 DVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred hcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 44445899999999999999999999999999999999998642211 11 134679999999999999999984
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.99 E-value=0.021 Score=63.69 Aligned_cols=82 Identities=17% Similarity=0.146 Sum_probs=61.4
Q ss_pred CCCccceEEEEecCCch---------hhhH----HHHHHHcCceEEEEeccCCCCcc--------ccCCCCcccEEEEec
Q 038881 433 PKKVKGKILVCLRGDNA---------RIDK----GQQALLAGAVGMVLANAQENGNE--------LLADPHLLPASHINF 491 (794)
Q Consensus 433 ~~~~~gkivl~~~g~~~---------~~~~----~~~~~~~Ga~gvi~~n~~~~~~~--------~~~~~~~~p~~~i~~ 491 (794)
..+++|||||++++.|. +..| ..+|.++||.|+|++++...... .......+|++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 56899999999998884 3444 35799999999999997542211 111235799999999
Q ss_pred cchHHHHHHHhcCCCcEEEEEec
Q 038881 492 TDGADLFRDVNSTKRPVGYLTRA 514 (794)
Q Consensus 492 ~~g~~l~~~~~~~~~~~~~i~~~ 514 (794)
++++.|+..+..+...++++...
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEe
Confidence 99999999998876666665543
No 46
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.95 E-value=0.0056 Score=71.74 Aligned_cols=71 Identities=27% Similarity=0.416 Sum_probs=56.6
Q ss_pred CCCccceEEEEecCCchhhhHHHHHHHcCceEEEEeccCCC----C---------------------------ccccC--
Q 038881 433 PKKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLANAQEN----G---------------------------NELLA-- 479 (794)
Q Consensus 433 ~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~----~---------------------------~~~~~-- 479 (794)
..+++|||+|+++|.|.+.+|..+|+++||.|+|+|++... + ....+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 45799999999999999999999999999999999986320 0 00000
Q ss_pred ---------------CCCcccEEEEeccchHHHHHHHhc
Q 038881 480 ---------------DPHLLPASHINFTDGADLFRDVNS 503 (794)
Q Consensus 480 ---------------~~~~~p~~~i~~~~g~~l~~~~~~ 503 (794)
....||++.|+..+++.|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 124689999999999999997754
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.44 E-value=0.014 Score=67.65 Aligned_cols=69 Identities=19% Similarity=0.239 Sum_probs=55.5
Q ss_pred CCccceEEEEecCCchhhhHHHHHHHcCceEEEEeccCCCCc------------------ccc----------------C
Q 038881 434 KKVKGKILVCLRGDNARIDKGQQALLAGAVGMVLANAQENGN------------------ELL----------------A 479 (794)
Q Consensus 434 ~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~gvi~~n~~~~~~------------------~~~----------------~ 479 (794)
.+++|||||+++|.|.+.+|..+|+++||.|+|+|++..... ... .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 589999999999999999999999999999999999753210 000 0
Q ss_pred CCCcccEEEEeccchHHHHHHHh
Q 038881 480 DPHLLPASHINFTDGADLFRDVN 502 (794)
Q Consensus 480 ~~~~~p~~~i~~~~g~~l~~~~~ 502 (794)
....+|+..|+..+++.|+..+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 12368999999999999988664
No 48
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.34 E-value=0.047 Score=49.12 Aligned_cols=73 Identities=23% Similarity=0.287 Sum_probs=54.0
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEcccccCCCCeEEEEEEEEeCCccEE
Q 038881 707 GSIIVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVRKVRAATKDYVFGDLVWADDKQHQV 785 (794)
Q Consensus 707 ~~~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~~~~~~~~~~~v 785 (794)
...+.+++++|+|. +..|++....| ++++|.+.++ ++|++..++|+|.+.. .+.+.+.+.+.-+++..+
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P~~-----~g~~~~~l~v~~~~g~~~ 110 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEPQS-----VGDHSGRLIVCYDTGEKV 110 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECCSS-----SBCCCCBCEEEESSSCEE
T ss_pred CeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEcCC-----CccEEEEEEEEECCCCEE
Confidence 67888999999999 88888876543 7889999999 7999999999998865 223455555543244555
Q ss_pred EeEE
Q 038881 786 RSPI 789 (794)
Q Consensus 786 ~~P~ 789 (794)
.+++
T Consensus 111 ~v~L 114 (122)
T 2ys4_A 111 FVSL 114 (122)
T ss_dssp CCEE
T ss_pred EEEE
Confidence 5543
No 49
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.47 E-value=0.29 Score=60.55 Aligned_cols=26 Identities=27% Similarity=0.417 Sum_probs=23.5
Q ss_pred ccCCCCceEEEEecCCCCCCCCCCcC
Q 038881 161 KARYGEDTIIGNLDTGVWPESKSFSD 186 (794)
Q Consensus 161 ~g~~G~GV~VaVIDTGId~~Hp~f~~ 186 (794)
..+.|+||+|||+|||||+.+|-|+-
T Consensus 31 P~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 31 PEYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TTCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCCccEEEEEeCCCCCCCCccee
Confidence 35799999999999999999999963
No 50
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=86.59 E-value=6.4 Score=35.89 Aligned_cols=86 Identities=16% Similarity=0.036 Sum_probs=60.6
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCC----CCcEEEEEccEEEEecCCcEEEEEEEEEEccc--ccC-C-CCeEEEEEEE
Q 038881 707 GSIIVSRTVRNVGS-PGTYIARVRNP----KGISVSVEPRSLKFLRVGEEKNFKVTIKVRKV--RAA-T-KDYVFGDLVW 777 (794)
Q Consensus 707 ~~~~~~~tv~n~~~-~~ty~~~~~~~----~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~--~~~-~-~~~~~G~~~~ 777 (794)
...+-+++++|.|. +.+|++..... ..--++++|..-++ .+|++.++.|++.++.. ... . ..-++--|++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 55678899999999 99999985321 12236778999999 79999999999987542 000 1 1223556777
Q ss_pred EeCCccEEEeEEEEEe
Q 038881 778 ADDKQHQVRSPIVVNP 793 (794)
Q Consensus 778 ~~~~~~~v~~P~~~~~ 793 (794)
.=.++....||+-..|
T Consensus 122 ~Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNY 137 (140)
T ss_dssp EETTSCEEEEEEEEEE
T ss_pred EeecCCcEEEEEeccc
Confidence 6446788889987655
No 51
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=85.24 E-value=0.48 Score=52.47 Aligned_cols=29 Identities=31% Similarity=0.362 Sum_probs=26.0
Q ss_pred CCccccccCCCCCCCCCCcccCceEeCCceEEeeecC
Q 038881 523 APIMAAFSSKGPSSVAPEILKPDITAPGVTIIAAYTE 559 (794)
Q Consensus 523 ~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~Sa~~~ 559 (794)
.+.++.||++|+.+ ||+|||++|+++++.
T Consensus 183 ~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 183 NLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp TCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 46899999999876 999999999999874
No 52
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=80.71 E-value=6.1 Score=34.81 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=43.6
Q ss_pred eEEEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEcc
Q 038881 708 SIIVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVRK 762 (794)
Q Consensus 708 ~~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~ 762 (794)
.-.+++.+.|... +.+|.++++..+++++. .+..+++ ++++..++.|.+....
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 3577888999999 99999999887776653 3556888 7999999999999876
No 53
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.11 E-value=1.7 Score=37.81 Aligned_cols=55 Identities=9% Similarity=0.083 Sum_probs=43.3
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeC-CCCcEEEEEccEEEEecCCcEEEEEEEEEEcc
Q 038881 707 GSIIVSRTVRNVGS-PGTYIARVRN-PKGISVSVEPRSLKFLRVGEEKNFKVTIKVRK 762 (794)
Q Consensus 707 ~~~~~~~tv~n~~~-~~ty~~~~~~-~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~ 762 (794)
...+.+++++|.|+ +..|++.... +.+..++++|..-++ .+|++++++|++.+..
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~ 82 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII 82 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC
Confidence 46778899999999 9999984321 113457789999888 7899999999998854
No 54
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=74.79 E-value=12 Score=33.48 Aligned_cols=51 Identities=18% Similarity=0.108 Sum_probs=36.8
Q ss_pred CceEEEEEEEEecCC--CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEE
Q 038881 706 SGSIIVSRTVRNVGS--PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKV 760 (794)
Q Consensus 706 ~~~~~~~~tv~n~~~--~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~ 760 (794)
+...++++||+|.|. ...|++.+-. .|-.+.- ..+.+ ++|++++|+++..+
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t--~~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKN--WTVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEE--EEEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEee--EEecc-CCCCeEEEEEEEEc
Confidence 468999999999998 5778887654 3443332 24456 78999988888764
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=68.76 E-value=15 Score=36.09 Aligned_cols=79 Identities=11% Similarity=0.069 Sum_probs=51.9
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEcccccCCCCeEEEEEEEEe-C---C
Q 038881 707 GSIIVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVRKVRAATKDYVFGDLVWAD-D---K 781 (794)
Q Consensus 707 ~~~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~~~~~~-~---~ 781 (794)
...+.+++++|.|+ +.+++... .|....+...|. ++ ++|++.+++|+++... ...-+...+.|.+.. + +
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~~--~I-~PG~~g~I~vt~~~~~--~~~~G~~~~~i~v~~~~~~~~ 92 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRAF--RL-QAREPRELNLSLAVPR--NMPPGMKDEPLVLEVTSPETG 92 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCEE--EE-CSSSCEEEEEEECCCT--TCCSEEEEEEEEEEEECTTTC
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEeeeCcc--ee-CCCCceEEEEEEcchh--cccCCceeeEEEEEEEcCCCC
Confidence 45677899999998 77777643 365544443344 44 8999999999998866 333455667777764 2 2
Q ss_pred -ccEEEeEEEE
Q 038881 782 -QHQVRSPIVV 791 (794)
Q Consensus 782 -~~~v~~P~~~ 791 (794)
....++|+..
T Consensus 93 ~~~~~~i~v~g 103 (220)
T 2qsv_A 93 KKAVDSVMVSL 103 (220)
T ss_dssp CEEEEEEEEEE
T ss_pred cccccEEEEEE
Confidence 2244666654
No 56
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=65.64 E-value=16 Score=42.75 Aligned_cols=86 Identities=13% Similarity=0.161 Sum_probs=49.1
Q ss_pred ceEEEEEEEEecCC-C--ceEEEEEeCCCCc-----EEEEEccEEEEecCCcEEEEEEEEEEcccc---cCCCCe--EEE
Q 038881 707 GSIIVSRTVRNVGS-P--GTYIARVRNPKGI-----SVSVEPRSLKFLRVGEEKNFKVTIKVRKVR---AATKDY--VFG 773 (794)
Q Consensus 707 ~~~~~~~tv~n~~~-~--~ty~~~~~~~~g~-----~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~---~~~~~~--~~G 773 (794)
...+++++|||+|+ + ++-.+-+..|.+. .--.-=..+.+ ++||+++++++++...-. ...+.| -.|
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~~ls~~d~~~~~w~ve~G 691 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRRDLSYWDTASQKWVVPSG 691 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGGGGCEEETTTTEEEECCE
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHHHeeeeecCCCeEEEcCc
Confidence 45789999999998 4 4555555555321 11122234556 899999999999876410 112333 235
Q ss_pred EEE-EEeCCccEEEeEEEEEe
Q 038881 774 DLV-WADDKQHQVRSPIVVNP 793 (794)
Q Consensus 774 ~~~-~~~~~~~~v~~P~~~~~ 793 (794)
... +.+...+.+|+--.+.+
T Consensus 692 ~y~v~vG~sS~d~~l~~~~~v 712 (713)
T 3zyz_A 692 SFGISVGASSRDIRLTSTLSV 712 (713)
T ss_dssp EEEEEEESSSSCEEEEEEEEE
T ss_pred eEEEEEECCCCCcceeEEEEE
Confidence 544 34444566665444433
No 57
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=65.39 E-value=51 Score=35.03 Aligned_cols=86 Identities=16% Similarity=0.050 Sum_probs=57.5
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCC----cEEEEEccEEEEecCCcEEEEEEEEEEccc--ccCC--CCeEEEEEEE
Q 038881 707 GSIIVSRTVRNVGS-PGTYIARVRNPKG----ISVSVEPRSLKFLRVGEEKNFKVTIKVRKV--RAAT--KDYVFGDLVW 777 (794)
Q Consensus 707 ~~~~~~~tv~n~~~-~~ty~~~~~~~~g----~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~--~~~~--~~~~~G~~~~ 777 (794)
...+-++|++|.|. +.+|.+....... -=++++|..-++ .+|++.+++|++.+... ...+ ..-.+--|++
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL 124 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 124 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEEEE
Confidence 56788889999999 9999996542221 127788999989 79999999999988752 0011 1223445666
Q ss_pred EeCCccEEEeEEEEEe
Q 038881 778 ADDKQHQVRSPIVVNP 793 (794)
Q Consensus 778 ~~~~~~~v~~P~~~~~ 793 (794)
.-.++...-+|+-..+
T Consensus 125 ~ve~G~d~FI~v~~~~ 140 (366)
T 3qis_A 125 HLDRGKDYFLTISGNY 140 (366)
T ss_dssp EETTSCEEEEEEEEEE
T ss_pred EEeCCCcEEEEecccc
Confidence 5435566666665443
No 58
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=63.20 E-value=65 Score=28.13 Aligned_cols=51 Identities=6% Similarity=-0.020 Sum_probs=41.5
Q ss_pred EEEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEcc
Q 038881 709 IIVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVRK 762 (794)
Q Consensus 709 ~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~ 762 (794)
.+.+++|+|.++ ...|++.-..|.- ..|.|..=.+ .+|++.++.|+.....
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECSCC
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCCCC
Confidence 467888999998 8899999888755 5567887666 8999999999998754
No 59
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=61.04 E-value=15 Score=42.97 Aligned_cols=55 Identities=20% Similarity=0.268 Sum_probs=37.3
Q ss_pred ceEEEEEEEEecCC---CceEEEEEeCCCCc-----EEEEEccEE-EEecCCcEEEEEEEEEEcc
Q 038881 707 GSIIVSRTVRNVGS---PGTYIARVRNPKGI-----SVSVEPRSL-KFLRVGEEKNFKVTIKVRK 762 (794)
Q Consensus 707 ~~~~~~~tv~n~~~---~~ty~~~~~~~~g~-----~v~~~p~~~-~~~~~~~~~~~~vt~~~~~ 762 (794)
+..+++++|||+|+ .++-.+-+..|.+- .--.-=..+ .+ ++||+++++++++...
T Consensus 615 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~~l~~~~ 678 (721)
T 2x41_A 615 ETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVLEIPVRD 678 (721)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEEEECHHH
Confidence 56899999999998 56666666665421 111112233 34 8999999999998764
No 60
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=51.04 E-value=24 Score=42.02 Aligned_cols=160 Identities=14% Similarity=0.153 Sum_probs=83.4
Q ss_pred cceeeccccchhhHHHHHHHHHHhhCCCCC-HHHHHHHHHhcCccccCCCcccccC-CCCCC-CCCcccccccccccccC
Q 038881 574 PFNALSGTSMSCPHVSGIVGLLKTLHPEWS-PAAIKSAIMTTASIQDNNKGQILNA-SSYKA-TPFSYGAGHIQPNLAMD 650 (794)
Q Consensus 574 ~y~~~sGTSmAaP~VAG~aALl~q~~p~ls-p~~ik~~L~~TA~~~~~~g~~~~~~-~~~~~-~~~~~G~G~vn~~~Al~ 650 (794)
-...++|..++-|-+.-+.|+|..++|.-- ...|-++|.--..|-..--..+... ...+. .++....|+
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~p~~~~d~P~~~~~~~~~g~-------- 689 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSWPFKLQDNPAFLNFKTEFGR-------- 689 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCBCSSGGGSTTTTSCSCBTTE--------
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceeeeCchhhCCccccCCCCCCc--------
Confidence 345678888888988888999999998765 5778888877765532110000000 00111 111000111
Q ss_pred CCccccCC-chhhhhhhhcCCCCccceEecccccccCCCCCCCCCCCCCeEEee--cC---CceEEEEEEEEecC-C-C-
Q 038881 651 PGLVYDLT-ENDYLNFLCALGYNKTQIALFSDKTYRCPEYVSTANFNYPSITVP--KL---SGSIIVSRTVRNVG-S-P- 721 (794)
Q Consensus 651 ~~lv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ps~~~~--~~---~~~~~~~~tv~n~~-~-~- 721 (794)
..|.+. ...|.-|... + .....| -...|.|..|... ++ .+..+++++|||+| + +
T Consensus 690 --~~y~eg~~vgYR~y~~~-~-----------~~plfP---FG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G 752 (845)
T 3abz_A 690 --VIYGEDIFVGYRYYEKL-Q-----------RKVAFP---FGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAG 752 (845)
T ss_dssp --EECTTTTCCTHHHHHHH-T-----------CCCSBC---TTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCE
T ss_pred --eeccCCccCCCcchhcC-C-----------Cceeec---ccCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCc
Confidence 122221 1123222100 0 000000 0234556666555 32 35689999999999 7 4
Q ss_pred -ceEEEEEeCCCC-----cEEEEEccEEEEecCCcEEEEEEEEE
Q 038881 722 -GTYIARVRNPKG-----ISVSVEPRSLKFLRVGEEKNFKVTIK 759 (794)
Q Consensus 722 -~ty~~~~~~~~g-----~~v~~~p~~~~~~~~~~~~~~~vt~~ 759 (794)
++-.+-+..|.+ +.--.-=..+.+ ++||+++++++++
T Consensus 753 ~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~ 795 (845)
T 3abz_A 753 SEVVQVYFSALNSKVSRPVKELKGFEKVHL-EPGEKKTVNIDLE 795 (845)
T ss_dssp EEEEEEEEEESSCSSCCCSCEEEEEEEEEE-CTTCEEEEEEEEE
T ss_pred ceeeeeeEeCCCCCcchhhheeccceeEEE-CCCCEEEEEEEeC
Confidence 444444544422 111122234556 8999999999999
No 61
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=50.49 E-value=88 Score=30.42 Aligned_cols=78 Identities=12% Similarity=0.233 Sum_probs=46.9
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEcccccCCCC-e--EEEEEEEEeC--
Q 038881 707 GSIIVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVRKVRAATKD-Y--VFGDLVWADD-- 780 (794)
Q Consensus 707 ~~~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~-~--~~G~~~~~~~-- 780 (794)
...+.+++++|.|+ +...+--.....-..+. ...-.+ ++||+.++.|+++... ..+. | ....|.+..+
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~v~~scgct~~~--~~~~~i-~PGe~~~i~v~~~~~~---~~g~~~~~~~~~i~v~~N~~ 207 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHSVTTRNPALTAV--PDRTEI-KPGGSTLLRIAVDPQV---MKAEGWQSIAADISIICNDP 207 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEEEEECSTTEEEE--ESCSEE-CTTCEEEEEEEECHHH---HHHTTCSEEEEEEEEEESCT
T ss_pred CeEEEEEEEEECCCCCEEEEEEEeCCCCEeee--cCCccC-CCCCEEEEEEEEecCC---CCCcccceeccEEEEEECCC
Confidence 56788899999998 66553222233233333 333345 8999999999998765 2232 1 4566665542
Q ss_pred CccEEEeEEE
Q 038881 781 KQHQVRSPIV 790 (794)
Q Consensus 781 ~~~~v~~P~~ 790 (794)
..+.+++.+-
T Consensus 208 ~~p~~~l~i~ 217 (220)
T 2qsv_A 208 QAPLRRIKVK 217 (220)
T ss_dssp TCSEEEEEEE
T ss_pred CCcEEEEEEE
Confidence 3445566553
No 62
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=46.90 E-value=51 Score=29.12 Aligned_cols=52 Identities=13% Similarity=0.179 Sum_probs=43.3
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEc
Q 038881 707 GSIIVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVR 761 (794)
Q Consensus 707 ~~~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~ 761 (794)
...+-.++|+|.++ ..-|++.-.+|.- ..|.|..=.+ .++++.++.|++...
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 45677899999999 9999999888854 5667888666 899999999999874
No 63
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=43.83 E-value=92 Score=27.34 Aligned_cols=69 Identities=14% Similarity=0.087 Sum_probs=43.3
Q ss_pred CceEEEEEEEEecCC-Cc--------eEEEEEeCCCCcEEE---------EEccEEEEecCCcEEEEEEEEEEcccccCC
Q 038881 706 SGSIIVSRTVRNVGS-PG--------TYIARVRNPKGISVS---------VEPRSLKFLRVGEEKNFKVTIKVRKVRAAT 767 (794)
Q Consensus 706 ~~~~~~~~tv~n~~~-~~--------ty~~~~~~~~g~~v~---------~~p~~~~~~~~~~~~~~~vt~~~~~~~~~~ 767 (794)
++...++++|+|.++ +. .|.+.+....|-.|- -.....+| ++||+++|+++.+. . ...
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~-~--~~p 92 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE-V--PEP 92 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS-C--CCS
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC-C--CCC
Confidence 467899999999986 33 344555544454443 22234567 89999999999983 1 234
Q ss_pred CCe-EEEEEEEE
Q 038881 768 KDY-VFGDLVWA 778 (794)
Q Consensus 768 ~~~-~~G~~~~~ 778 (794)
+.| +.++++-.
T Consensus 93 G~Ytl~a~l~~~ 104 (120)
T 3isy_A 93 GTYEVKVTFKGR 104 (120)
T ss_dssp EEEEEEEEECCE
T ss_pred ccEEEEEEEEee
Confidence 444 55555544
No 64
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=41.33 E-value=53 Score=29.07 Aligned_cols=51 Identities=16% Similarity=0.140 Sum_probs=42.5
Q ss_pred eEEEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEc
Q 038881 708 SIIVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVR 761 (794)
Q Consensus 708 ~~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~ 761 (794)
..+-.++|+|.++ ..-|++.-.+|.- ..|.|..=.+ .++++..+.|++..-
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecCC
Confidence 4566788999999 9999999988865 5667888777 799999999998874
No 65
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=41.29 E-value=59 Score=29.80 Aligned_cols=53 Identities=17% Similarity=0.157 Sum_probs=43.3
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEcc
Q 038881 707 GSIIVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVRK 762 (794)
Q Consensus 707 ~~~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~ 762 (794)
...+-.++|+|.++ ...|++.-.+|.- ..|.|..=.+ .++++.++.|++....
T Consensus 35 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~~ 88 (152)
T 1wic_A 35 GEKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGGL 88 (152)
T ss_dssp SCCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSSS
T ss_pred ceEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCcc
Confidence 34566889999999 9999999888854 5567888777 8999999999997743
No 66
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=38.63 E-value=21 Score=27.23 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=26.5
Q ss_pred cchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhcC
Q 038881 582 SMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTA 615 (794)
Q Consensus 582 SmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA 615 (794)
|-..|..--....|++.||+++...|+..|...=
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~ 36 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQR 36 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTT
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcC
Confidence 3334444556788999999999999999998874
No 67
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=37.98 E-value=1.1e+02 Score=26.39 Aligned_cols=50 Identities=12% Similarity=0.065 Sum_probs=41.1
Q ss_pred EEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEcc
Q 038881 710 IVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVRK 762 (794)
Q Consensus 710 ~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~ 762 (794)
+-+.+++|.++ ...|++.-.+|.- ..|.|..=.+ .+|++.++.|+.....
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~~~ 68 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTAGA 68 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECSCC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCCCC
Confidence 56788999999 9999999888855 5567888766 8999999999988743
No 68
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=37.22 E-value=1.9e+02 Score=32.57 Aligned_cols=63 Identities=16% Similarity=0.124 Sum_probs=43.7
Q ss_pred CCCeEEeecCCceEEEEEEEEecCC-CceE-EEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEcc
Q 038881 696 NYPSITVPKLSGSIIVSRTVRNVGS-PGTY-IARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVRK 762 (794)
Q Consensus 696 n~ps~~~~~~~~~~~~~~tv~n~~~-~~ty-~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~ 762 (794)
..|.+++... ++.+++++|+|-+. +..- ++++..|.+.++.. ....+ ++|++.++.++|++..
T Consensus 363 ~~~~~~~~~g-~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~ 427 (601)
T 1w8o_A 363 TIPDVALEPG-QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPA 427 (601)
T ss_dssp ECCCEEECTT-CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCT
T ss_pred cCccceecCC-ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCC
Confidence 3466666653 67899999999765 3222 44566688888776 33445 6799999988888865
No 69
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=34.49 E-value=8 Score=34.12 Aligned_cols=53 Identities=23% Similarity=0.274 Sum_probs=34.4
Q ss_pred EEEEEEEecCC-CceEEEEEe-CCCCcEEEEEccEEEEe-cCCcEEEEEEEEEEcc
Q 038881 710 IVSRTVRNVGS-PGTYIARVR-NPKGISVSVEPRSLKFL-RVGEEKNFKVTIKVRK 762 (794)
Q Consensus 710 ~~~~tv~n~~~-~~ty~~~~~-~~~g~~v~~~p~~~~~~-~~~~~~~~~vt~~~~~ 762 (794)
.+..-|+|.+. ..+..+.++ .|.|++++++|..+++. ....+++|.|++....
T Consensus 56 ~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g 111 (119)
T 2kq1_A 56 EVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMIN 111 (119)
T ss_dssp EEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCC
T ss_pred EEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECC
Confidence 34444555553 334444555 68899999999988765 4456777777776654
No 70
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=33.67 E-value=1.2e+02 Score=26.40 Aligned_cols=24 Identities=13% Similarity=0.228 Sum_probs=18.2
Q ss_pred CceEEEEEEEEecCC--CceEEEEEe
Q 038881 706 SGSIIVSRTVRNVGS--PGTYIARVR 729 (794)
Q Consensus 706 ~~~~~~~~tv~n~~~--~~ty~~~~~ 729 (794)
+...+++.+|+|.|. +..+++.+.
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEE
Confidence 477899999999997 455666553
No 71
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=32.82 E-value=71 Score=29.01 Aligned_cols=52 Identities=13% Similarity=0.177 Sum_probs=42.8
Q ss_pred ceEEEEEEEEecCC-CceEEEEEeCCCCcEEEEEccEEEEecCCcEEEEEEEEEEc
Q 038881 707 GSIIVSRTVRNVGS-PGTYIARVRNPKGISVSVEPRSLKFLRVGEEKNFKVTIKVR 761 (794)
Q Consensus 707 ~~~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~ 761 (794)
...+-.++|+|.++ ..-|++.-.+|.- ..|.|..=.+ .++++.++.|++...
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 44567789999999 9999999988865 5567888666 899999999999874
No 72
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=28.39 E-value=1.6e+02 Score=29.37 Aligned_cols=65 Identities=6% Similarity=0.033 Sum_probs=41.3
Q ss_pred CCCCCeEEeecCCceEEEEEEEEecCC-CceEEEEEeCCCCcEEEEE-----ccEEEEecCCcEEEEEEEEEEc
Q 038881 694 NFNYPSITVPKLSGSIIVSRTVRNVGS-PGTYIARVRNPKGISVSVE-----PRSLKFLRVGEEKNFKVTIKVR 761 (794)
Q Consensus 694 ~~n~ps~~~~~~~~~~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~-----p~~~~~~~~~~~~~~~vt~~~~ 761 (794)
++|+|.+.+.. +...+..+|.|..+ ....++.+....++..... ..++++ ++++++++...+.+.
T Consensus 85 ~~~LP~sv~rG--E~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v-~a~~~~~v~f~i~p~ 155 (252)
T 3hrz_B 85 DLQMPYSVVKN--EQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPI-KALSSRAVPFVIVPL 155 (252)
T ss_dssp EECCCSCEETT--CCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEE-CTTEEEEEEEEEEEC
T ss_pred EcCCCcEEeeC--CEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEE-CCCCeEEEEEEEEec
Confidence 57788766543 67889999999987 7777777765544433211 123555 566666666666553
No 73
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=26.24 E-value=31 Score=30.55 Aligned_cols=55 Identities=25% Similarity=0.336 Sum_probs=32.8
Q ss_pred CceEEEEEEEEecCC--CceEEEEE--eCCC--CcEEEEEccEEEEecCCcEEEEEEEEEEcc
Q 038881 706 SGSIIVSRTVRNVGS--PGTYIARV--RNPK--GISVSVEPRSLKFLRVGEEKNFKVTIKVRK 762 (794)
Q Consensus 706 ~~~~~~~~tv~n~~~--~~ty~~~~--~~~~--g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~ 762 (794)
+...+|+.||+|.|. ..-+.+.+ ..|. |..+...+ .-.+ ++|++.+++|+++...
T Consensus 15 g~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~vgt~t-v~~L-aaG~s~t~~v~~~~~~ 75 (122)
T 2kut_A 15 GEEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEIGRDT-ISRI-PVGGTGLARVQWKATR 75 (122)
T ss_dssp TCEEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCCBCCC-CSCB-CTTCEEECCEEEECCC
T ss_pred CCeEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEEeeEE-cccc-CCCCeEEEEEEEecCC
Confidence 467899999999996 33344443 3332 22222111 1123 7899999888877654
No 74
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=24.31 E-value=5.3e+02 Score=25.55 Aligned_cols=53 Identities=13% Similarity=0.192 Sum_probs=38.0
Q ss_pred ceEEEEEEEEecCCCceEEEE--EeCCC--------CcEEEEEccEEEEecCCcEEEEEEEEEEc
Q 038881 707 GSIIVSRTVRNVGSPGTYIAR--VRNPK--------GISVSVEPRSLKFLRVGEEKNFKVTIKVR 761 (794)
Q Consensus 707 ~~~~~~~tv~n~~~~~ty~~~--~~~~~--------g~~v~~~p~~~~~~~~~~~~~~~vt~~~~ 761 (794)
+....+++|+|.++ ..|.+. ++... ...+.++|..+.+ ++++++.+.|.....
T Consensus 42 ~~k~~sl~l~N~~~-~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 42 SEREVTLRVSNTSG-TPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKA 104 (257)
T ss_dssp TCSEEEEEEEECSS-SCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCC
T ss_pred CCcEEEEEEEeCCC-CeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCC
Confidence 45678899999875 345554 33211 2458999999999 799999999976543
No 75
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=23.81 E-value=1.8e+02 Score=24.88 Aligned_cols=63 Identities=17% Similarity=0.103 Sum_probs=33.2
Q ss_pred CCeEEeecCCceEEEEEEEEecCCCceEEEEEe-----CCCCcEEEEEccEEEEecCCc-EEEEEEEEEEc
Q 038881 697 YPSITVPKLSGSIIVSRTVRNVGSPGTYIARVR-----NPKGISVSVEPRSLKFLRVGE-EKNFKVTIKVR 761 (794)
Q Consensus 697 ~ps~~~~~~~~~~~~~~tv~n~~~~~ty~~~~~-----~~~g~~v~~~p~~~~~~~~~~-~~~~~vt~~~~ 761 (794)
-+++.+.+..+..+++++.+.-. ..+-++.+. +.+|........+|+| ++|| +++++|.+.-+
T Consensus 9 ~~~y~V~E~~g~~~v~V~R~g~~-~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F-~~Get~k~i~V~I~dD 77 (114)
T 3e9t_A 9 PGHYTVMENCGEFEVRVVRRGDI-STYASVEYETQDGTASAGTDFVGRKGLLSF-PPGVDEQRFRIEVIDD 77 (114)
T ss_dssp SSEEEEETTCCEEEEEEEEEECC-SSCEEEEEEEECSSSCBTTTBCCCEEEEEE-CTTCCEEEEEEEBCCC
T ss_pred CCEEEEEcCCeEEEEEEEEECCC-CeeEEEEEEeECCccCCCCCceEcceEEEE-eCCcEEEEEEEEEEcC
Confidence 34667776555555555444422 333333322 3345555555678999 6776 45555555443
No 76
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=22.76 E-value=57 Score=30.08 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=27.3
Q ss_pred eeeccccchhhHHHHHHHHHHhhCCCCCHHHHHH
Q 038881 576 NALSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKS 609 (794)
Q Consensus 576 ~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~ 609 (794)
-.+.|-| =|+.|-|++|||++.+-..+|+||.+
T Consensus 77 l~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 77 MHFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CCCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 3444666 47899999999999999999999865
No 77
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=21.74 E-value=2.2e+02 Score=36.19 Aligned_cols=66 Identities=6% Similarity=-0.007 Sum_probs=49.2
Q ss_pred CCCCCCeEEeecCCceEEEEEEEEecCC-CceEEEEEeCCCCcEEEEE---ccEEEEecCCcEEEEEEEEEEc
Q 038881 693 ANFNYPSITVPKLSGSIIVSRTVRNVGS-PGTYIARVRNPKGISVSVE---PRSLKFLRVGEEKNFKVTIKVR 761 (794)
Q Consensus 693 ~~~n~ps~~~~~~~~~~~~~~tv~n~~~-~~ty~~~~~~~~g~~v~~~---p~~~~~~~~~~~~~~~vt~~~~ 761 (794)
-++++|.+..+. +...+..+|.|..+ ...+++++....++.+.-. ..++++ ++++++++.+.+.+.
T Consensus 771 v~~~LP~sv~rG--E~~~l~~~V~N~~~~~~~v~V~l~~~~~~~~~~~~~~~~~v~l-~~~~~~~v~f~v~p~ 840 (1451)
T 4acq_A 771 VELTMPYSVIRG--EAFTLKATVLNYLPKCIRVSVQLEASPAFLAVPVEKEQAPHCI-CANGRQTVSWAVTPK 840 (1451)
T ss_dssp EEEECCSEEESS--SCEEEEEEEEECSSSCEEEEEEECCCTTEEEEESCSCCCCEEE-CTTEEEEEEEEEEEC
T ss_pred EEccCCceEecC--CEEEEEEEEEeccCccEEEEEEEEcCCCeEeecCCCCceEEEE-CCCCeEEEEEEEEEC
Confidence 367778776653 67899999999998 8899999887767665432 346777 677888887777764
Done!