BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038890
(569 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/531 (66%), Positives = 424/531 (79%), Gaps = 6/531 (1%)
Query: 25 ESTKLILRNA----IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
ES L LRN I++CKN+RELK+ HTQI+KSP L T D + LITRLL+ C+ S GS
Sbjct: 11 ESLSLTLRNTLSRLIEQCKNLRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGS 70
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
SYATNVF IK DL YNIMIRA S +DTH K L LYKQM C I P+CLTF
Sbjct: 71 FSYATNVFHMIKNPDLRAYNIMIRAYISMES-GDDTHFCKALMLYKQMFCKDIVPNCLTF 129
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
PFLLK CT+ LDG G +++ QV+KFG DV+V NS+ISL+MA G +++AR +FDEM
Sbjct: 130 PFLLKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLV 189
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
DVV+WN+M+IG LR+G LD+A+DLFR+M RNI +WNSIITG QGG A+E+LELF EM
Sbjct: 190 TDVVTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEM 249
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
Q S ++MVKPDKITIASVLSACA LGAIDHGKWVHGYLRR+G++CDVVIGTALV+MYGK
Sbjct: 250 QILS-DDMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGK 308
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG V++A+ +F+EMP+KD AWT MISVFAL+G G +AF+ F EME GV+PNHVTFVGL
Sbjct: 309 CGDVQKAFEIFEEMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGL 368
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
LSACAHSGLVE+GRWCF +M+ VY +EP VYHYACM+DILSRA LF E+E LIRSMPM+P
Sbjct: 369 LSACAHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKP 428
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
DV+VWGALLGGCQMHGNVELGEKV +LIDL+P NHAFYVN CD+YAKAG FD K+ RN
Sbjct: 429 DVYVWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRN 488
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+MKE+ I K++PGCS +E++G V EFS GS ++ +ELVL+LNGLS MK
Sbjct: 489 IMKEKRIEKKIPGCSMIEINGEVQEFSAGGSSELPMKELVLVLNGLSNEMK 539
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/531 (61%), Positives = 409/531 (77%), Gaps = 4/531 (0%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P + K L I++CKN++E+K IHT I+KSP L T D + L TRLL+FC+ S S
Sbjct: 13 PKNLTLKNTLSTLIEQCKNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASF 72
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
+YA NVF IK +L YNIMIR+ C + K L LYKQML GI P+ LTFP
Sbjct: 73 NYANNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFP 132
Query: 142 FLLKECTK-RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
FL+K C++ + G VG ++ V+KFG +DVFV NS+ISLFM G +AR +FDEM
Sbjct: 133 FLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFV 192
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
RDVVSWN+M++GYLR+G++++AL+LFR+M RNI +WNSIITG VQ G A+E+LE+F EM
Sbjct: 193 RDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEM 252
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
Q S +++VKPDKITIASVLSACA LG+IDHGKWVH YLR++ ++CDVVIGTALV+MYGK
Sbjct: 253 QFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGK 312
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG V++A +F +MP+KD AWTAMISVFAL+G+GK+AFD F EME GV+PNHVTFVGL
Sbjct: 313 CGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGL 372
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
LSAC+HSGLVE+GR CF +M+ VY +EP +YHYACM+DILSRA LF EA LIRSMPM+P
Sbjct: 373 LSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKP 432
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
DV+VWGALLGGCQMHGN++LGEKVA YLIDL+P NHAFY+NLCD+Y KAG++D K+ RN
Sbjct: 433 DVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRN 492
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
MKERGI ++PGCS +E++GVV EFS+ P +EL L+L+ L MK
Sbjct: 493 SMKERGIETKIPGCSIIEINGVVQEFSVGEIP---MKELPLVLDRLRNEMK 540
>gi|255539647|ref|XP_002510888.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550003|gb|EEF51490.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/366 (68%), Positives = 295/366 (80%), Gaps = 6/366 (1%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
I CKN+ +LK+IH I+ SP L DH+ LI+RLLFF ALS SGSL+YA ++F +IK+
Sbjct: 5 IQHCKNINQLKQIHALILTSPNLDQKDHYFLISRLLFFAALSDSGSLAYAADIFHYIKKP 64
Query: 95 DLYTYNIMIRANACKSS-ETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+L YNIMIRA A KS+ + +D + L LYKQMLC ISPDCLTFPFLLKECT+ +
Sbjct: 65 NLPFYNIMIRAYASKSNVDYDDARLCQALILYKQMLCNDISPDCLTFPFLLKECTRNVAI 124
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G ++G +K G+ D+FVQNS+IS + AC FV+++R LFDEMSNRDVVSWN+MIIGY
Sbjct: 125 YGGRGIHGHAIKLGLYSDLFVQNSLISFYSACEFVSNSRKLFDEMSNRDVVSWNSMIIGY 184
Query: 214 LRSGDLDVALDLFRRMK-KRNIFSWNSIITGFVQGGRAREALELFQEMQ----SSSVEEM 268
LRSGDLD +L+LFR+MK RN+ +WNSIITGFVQGGR +EALE F EMQ +
Sbjct: 185 LRSGDLDQSLNLFRKMKINRNVITWNSIITGFVQGGRPKEALEFFHEMQCLRDDDGINNK 244
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
V+PDKITIASVLSACA+LGAIDHGKWVH YLRRSGL+CD+VIGTALVDMYGKCGC++RAY
Sbjct: 245 VRPDKITIASVLSACAHLGAIDHGKWVHSYLRRSGLECDMVIGTALVDMYGKCGCLQRAY 304
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF+EM +KDTLAWTAMISVFALNG+GKEAFD F EMEA GV+PN VTFVGLLSACAHSG
Sbjct: 305 EVFREMSEKDTLAWTAMISVFALNGFGKEAFDMFNEMEAGGVKPNLVTFVGLLSACAHSG 364
Query: 389 LVEKGR 394
LVE GR
Sbjct: 365 LVETGR 370
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 122/288 (42%), Gaps = 53/288 (18%)
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFV-------QGGRAREALELFQEMQSSSVEEM 268
SG L A D+F +KK N+ +N +I + R +AL L+++M + +
Sbjct: 48 SGSLAYAADIFHYIKKPNLPFYNIMIRAYASKSNVDYDDARLCQALILYKQMLCNDIS-- 105
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
PD +T +L C AI G+ +HG+ + GL D+ + +L+ Y C V +
Sbjct: 106 --PDCLTFPFLLKECTRNVAIYGGRGIHGHAIKLGLYSDLFVQNSLISFYSACEFVSNSR 163
Query: 329 GVFKEMPKKDTLAWTAMI--------------------------------SVFALNGYGK 356
+F EM +D ++W +MI + F G K
Sbjct: 164 KLFDEMSNRDVVSWNSMIIGYLRSGDLDQSLNLFRKMKINRNVITWNSIITGFVQGGRPK 223
Query: 357 EAFDTFREMEA--------EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
EA + F EM+ VRP+ +T +LSACAH G ++ G+W +R L
Sbjct: 224 EALEFFHEMQCLRDDDGINNKVRPDKITIASVLSACAHLGAIDHGKWVHSYLRRSGLECD 283
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
V A ++D+ + G A + R M E D W A++ ++G
Sbjct: 284 MVIGTA-LVDMYGKCGCLQRAYEVFREMS-EKDTLAWTAMISVFALNG 329
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/493 (41%), Positives = 316/493 (64%), Gaps = 15/493 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS-LSYATNVFSHIKR 93
+ C ELK+IH +++K+ +Q D ++ IT+ L FC S S L YA VF R
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQ--DSYA-ITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
D + +N+MIR +C + L LY++MLC+ + TFP LLK C+
Sbjct: 78 PDTFLWNLMIRGFSCSDEPE------RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 131
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
++ Q+ K G +DV+ NS+I+ + G A +LFD + D VSWN++I GY
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 191
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
+++G +D+AL LFR+M ++N SW ++I+G+VQ +EAL+LF EMQ+S VE PD
Sbjct: 192 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE----PDN 247
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+++A+ LSACA LGA++ GKW+H YL ++ + D V+G L+DMY KCG +E A VFK
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
+ KK AWTA+IS +A +G+G+EA F EM+ G++PN +TF +L+AC+++GLVE+G
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
+ F M Y ++P + HY C++D+L RAGL EA+R I+ MP++P+ +WGALL C+
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
+H N+ELGE++ + LI +DP + YV+ +++A ++D +TR LMKE+G+ K VPG
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK-VPG 486
Query: 514 CSSVEVDGVVHEF 526
CS++ ++G HEF
Sbjct: 487 CSTISLEGTTHEF 499
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 318/515 (61%), Gaps = 17/515 (3%)
Query: 15 SPAKVSPPNK---ESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF 71
+P +P ++ ES + + C NM EL++IH Q++K+ + S +LL
Sbjct: 2 APILCTPTSQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPAS---KLLA 58
Query: 72 FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
FCA SGSL+YA VF I R + + +N MIR +N + L LY ML
Sbjct: 59 FCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGY------SNSKEPEEALLLYHHMLYH 112
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
+ + TFPFLLK C+ ++ ++K G +++ NS+++++ G + SA
Sbjct: 113 SVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSA 172
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R+LFD++ RD VSWN+MI GY + G++++A ++F M +RNI SW S+I+G V G+ +
Sbjct: 173 RLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPK 232
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EAL LF MQ++ + K D + + S L ACA LG +D GKW+H Y+++ ++ D ++G
Sbjct: 233 EALNLFHRMQTAGI----KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG 288
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
L+DMY KCG +E A VF++M +K WTAMIS +A++G G+EA + F +M+ GV
Sbjct: 289 CVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVE 348
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
PN +TF G+L+AC+H+GLV + + F M ++ +P + HY CM+D+L RAGL EAE
Sbjct: 349 PNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEE 408
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
LI +MP++P+ +WGALL C +HGN+ELG+++ + LI +DP + Y++L ++A AG
Sbjct: 409 LIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGE 468
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++ + R MKE+G+ K +PGCS + V+G HEF
Sbjct: 469 WNQAARVRRQMKEQGVSK-LPGCSVISVNGTAHEF 502
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/569 (40%), Positives = 336/569 (59%), Gaps = 51/569 (8%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHH-SLITRLLFFCALSVSG 79
P + KL + + CK+++ LK+IH IIK+ + + D ++ TRL CA S+
Sbjct: 30 PHDFNPHKLSFLSTLQTCKSIKGLKQIHASIIKT--MPSPDAQLTISTRLSALCAQSLPI 87
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
YA ++ + ++ +L YN +IR A + ND+ G L +YKQML GI PD T
Sbjct: 88 DPRYALSLLAQLRTPNLPLYNAIIRGLA---TSNNDSIEG--LVVYKQMLSKGIVPDNYT 142
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
PF+LK C + G V+GQ +K G+ DV+V N+++ ++ C + SAR +FD
Sbjct: 143 IPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSP 202
Query: 200 NRDVVSWNAMIIGY----------------------------------LRSGDLDVALDL 225
RD+VSW MI GY L+ GD + A +
Sbjct: 203 QRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKV 262
Query: 226 FRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY 285
F+ M +N+ SWNS+I+G Q G+ +E+L +F++MQ V KPD +T+ +VL++CA
Sbjct: 263 FQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGV----KPDDVTLVAVLNSCAN 318
Query: 286 LGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAM 345
LG ++ GKWVH YL R+ + D IG ALVDMY KCG +++A VF+ M +KD ++TAM
Sbjct: 319 LGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAM 378
Query: 346 ISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL 405
I A++G G +A D F EM G+ P+ VTFVG+L+AC+H GLVE+GR F M +Y
Sbjct: 379 IVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYN 438
Query: 406 VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVA 465
+ P + HY CM+D+L RAGL +EAE IR+MP+EPD FV GALLG C++HG VELGE V
Sbjct: 439 LRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVM 498
Query: 466 QYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHE 525
+ + ++P YV + ++Y+ A R+ D K R MKER + K PGCSS+E+DGV+HE
Sbjct: 499 KKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEK-TPGCSSIELDGVIHE 557
Query: 526 FSM--KGSPKVVKEELVLILNGLSKIMKN 552
F K PK+ +E+ +L+ + +KN
Sbjct: 558 FQKGDKSHPKI--KEIYKLLDEIMSHLKN 584
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 318/515 (61%), Gaps = 17/515 (3%)
Query: 15 SPAKVSPPNK---ESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF 71
+P +P ++ ES + + C NM EL++IH Q++K+ + S +LL
Sbjct: 2 APILCTPTSQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPAS---KLLA 58
Query: 72 FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
FCA SGSL+YA VF I R + + +N MIR +N + L LY ML
Sbjct: 59 FCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGY------SNSKEPEEALLLYHHMLYH 112
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
+ + TFPFLLK C+ ++ ++K G +++ NS+++++ G + SA
Sbjct: 113 SVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSA 172
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R+LFD++ RD VSWN+MI GY + G++++A ++F M +RNI SW S+I+G V G+ +
Sbjct: 173 RLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPK 232
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EAL LF MQ++ + K D + + S L ACA LG +D GKW+H Y+++ ++ D ++G
Sbjct: 233 EALNLFHRMQTAGI----KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG 288
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
L+DMY KCG +E A VF++M +K WTAMIS +A++G G+EA + F +M+ GV
Sbjct: 289 CVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVE 348
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
PN +TF G+L+AC+H+GLV + + F M ++ +P + HY CM+D+L RAGL EAE
Sbjct: 349 PNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEE 408
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
LI +MP++P+ +WGALL C +HGN+ELG+++ + LI +DP + Y++L ++A AG
Sbjct: 409 LIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGE 468
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++ + R MKE+G+ K +PGCS + V+G HEF
Sbjct: 469 WNQAARVRRQMKEQGVSK-LPGCSVISVNGTAHEF 502
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/509 (41%), Positives = 320/509 (62%), Gaps = 15/509 (2%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
V P S ++ N C ELK+IH +++K+ +Q D ++ IT+ L C S S
Sbjct: 34 VGPLLSGSCYCMMPNTETRCSKQEELKQIHARMLKTGLIQ--DSYA-ITKFLSCCISSTS 90
Query: 79 GS-LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
L YA VF R D + +N+MIR +C + L LY++MLC +
Sbjct: 91 SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPE------RSLLLYQRMLCCSAPHNA 144
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
TFP LLK C+ ++ Q+ K G +DV+ NS+I+ + A G A +LFD
Sbjct: 145 YTFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDR 204
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ D VSWN++I GY ++G +D+AL LFR+M ++N SW ++I+G+VQ G +EAL+LF
Sbjct: 205 IPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLF 264
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
EMQ+S VE PD +++A+ LSACA LGA++ GKW+H YL ++ + D V+G L+DM
Sbjct: 265 HEMQNSDVE----PDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDM 320
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG + A VFK + +K AWTA+IS +A +G+G+EA F EM+ G++PN +TF
Sbjct: 321 YAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITF 380
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+L+AC+++GLVE+G+ F M Y ++P + HY C++D+LSRAGL EA+R I+ MP
Sbjct: 381 TTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMP 440
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
++P+ +WGALL C++H N+ELGE++ + LI +DP + YV+ +++A ++D +
Sbjct: 441 LKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAE 500
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
TR LMKE+G+ K VPGCS++ ++G HEF
Sbjct: 501 TRRLMKEQGVAK-VPGCSTISLEGTTHEF 528
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 323/540 (59%), Gaps = 16/540 (2%)
Query: 18 KVSPPNKESTKL--ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL 75
+ SPP+ S K + +D C M ELK+ H+QII+ ND + R++ FCA+
Sbjct: 8 QASPPSLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADND---AMGRVIKFCAI 64
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S SG L+YA VF I D Y YN + R N C+ +Y +ML +SP
Sbjct: 65 SKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARN------CIFMYSRMLHKSVSP 118
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
+ T+P L++ C G ++ V+KFG D F N++I +++ + AR +F
Sbjct: 119 NKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVF 178
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D M RDVVSW ++I GY + G +D A ++F M +RN SWN++I +VQ R EA
Sbjct: 179 DNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFA 238
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
LF M+ E V DK AS+LSAC LGA++ GKW+HGY+ +SG++ D + T ++
Sbjct: 239 LFDRMRL----ENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVI 294
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DMY KCGC+E+A VF E+P+K +W MI A++G G+ A + F+EME E V P+ +
Sbjct: 295 DMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGI 354
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
TFV +LSACAHSGLVE+G+ F M V ++P + H+ CM+D+L RAGL EA +LI
Sbjct: 355 TFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINE 414
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP+ PD V GAL+G C++HGN ELGE++ + +I+L+P N YV L ++YA AGR++DV
Sbjct: 415 MPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDV 474
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K R LM +RG++K PG S +E + V EF G +E+ L+ + + +++ G+
Sbjct: 475 AKVRKLMNDRGVKK-APGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGY 533
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/536 (41%), Positives = 330/536 (61%), Gaps = 15/536 (2%)
Query: 17 AKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS 76
A V +S++ +L + +D+C M +K+I + + S L D + R++ FCA+S
Sbjct: 3 ASVGSKYLKSSRRVL-SLLDQCVTMAHIKQIQSHLTVSGTL--FDPFA-AGRIISFCAVS 58
Query: 77 VSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPD 136
G +S+A +F + R + +N M+RA T+ L LYK ML TG P+
Sbjct: 59 AQGDISHAYLLFLSLPRRTSFIWNTMLRAF------TDKKEPATVLSLYKYMLSTGFLPN 112
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
TF FLL+ C + D G ++ Q V+ G FVQN ++ L+ +C + SAR LFD
Sbjct: 113 NYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFD 172
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
NRDVV+W A+I GY +SG + VA LF M ++N SW+++ITG+ Q G REALEL
Sbjct: 173 GSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALEL 232
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F +MQ + +P+ I L+ACA+LGA+D G+W+H Y+ R+ + D ++GTAL+D
Sbjct: 233 FNDMQIAGF----RPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALID 288
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCGCVE A VF EM +D A+T++IS A +G+ A + F M+ EGV PN VT
Sbjct: 289 MYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVT 348
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
F+ LLSAC+ GLVE+G F M ++Y +EP V HY C++D+L RAG+ +A+R++R M
Sbjct: 349 FICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM 408
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
P+EPD +V GALL C++HG+VELG++ + L + + +V L +MYA A +++DV
Sbjct: 409 PLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVA 468
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
K R M+E+ ++K VPGCS +EVDG V EF V +E+VL+L G+ K +K+
Sbjct: 469 KVRKGMEEKKVKK-VPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLKS 523
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/506 (39%), Positives = 318/506 (62%), Gaps = 18/506 (3%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
PPN E T+ +L + C NM+EL +IH Q++K ++ + ++ T L+ + + + +
Sbjct: 7 PPNTEQTQALL----ERCSNMKELMQIHGQLLKKGTIR--NQLTVSTLLVSYARIELV-N 59
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
L+Y VF I + +N M+RA S +ND + L LY QML + + TF
Sbjct: 60 LAYTRVVFDSISSPNTVIWNTMLRA----YSNSNDPEAA--LLLYHQMLHNSVPHNSYTF 113
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
PFLLK C+ ++ ++K G +V+ NS++ ++ G + SA +LF+++
Sbjct: 114 PFLLKACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPT 173
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
RD+VSWN MI GY++ G+LD+A +F+ M ++N+ SW ++I GFV+ G +EAL L Q+M
Sbjct: 174 RDIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQM 233
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
+ + KPD IT++ LSACA LGA++ GKW+H Y+ ++ + D V+G L DMY K
Sbjct: 234 LVAGI----KPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVK 289
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG +E+A VF ++ KK AWTA+I A++G G+EA D F +M+ G+ PN +TF +
Sbjct: 290 CGEMEKALLVFSKLEKKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAI 349
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
L+AC+H+GL E+G+ F M VY ++P + HY CM+D++ RAGL EA I SMP++P
Sbjct: 350 LTACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKP 409
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
+ +WGALL CQ+H + ELG+++ + LI+LDP + Y++L +YA AG ++ V + R+
Sbjct: 410 NAAIWGALLNACQLHKHFELGKEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRS 469
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEF 526
+K RG+ PGCSS+ ++GVVHEF
Sbjct: 470 QIKHRGLLNH-PGCSSITLNGVVHEF 494
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/543 (38%), Positives = 328/543 (60%), Gaps = 16/543 (2%)
Query: 14 NSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFC 73
+P + P ILR+ + CK +++L +IH Q I + N + +R+L F
Sbjct: 22 QNPPWIPTPQLLCKYPILRH-LSSCKTLKDLTQIHAQTITTGIFSDN---FVASRILSFA 77
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGI 133
ALS GS+ YA +F I++ D++ N +IRA A + + + Y +M + +
Sbjct: 78 ALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPID------AVVFYSEMTESSV 131
Query: 134 S-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
PD TFP LLK C++ +G +++ V K G +V V N ++ ++ +CG + SA
Sbjct: 132 VFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAG 191
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
++FD D SWN MI GYL+ G A +F M R++ SW+ +I G+VQ R +E
Sbjct: 192 LVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKE 251
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
L LFQ+M E ++P++ + + LSACA+LGA++ G+W+ Y+ R + V +GT
Sbjct: 252 GLGLFQDMMG----EKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGT 307
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
AL+DMY KCG VERA VF +M +K+ LAW+AMI+ A+NG GK+A + F +ME +GV+P
Sbjct: 308 ALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKP 367
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
N VTF+G+L+AC+HS LV++G F M +Y ++P+ +H+ CM+D+ RAG+ +A+ +
Sbjct: 368 NEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTV 427
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
I+SMP +P+ +WGALL C++HG+ ELGE+V + L++LDP + YV L ++YA GR+
Sbjct: 428 IKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRW 487
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
D V + R +M+ER + K PGCS +++ +HEF S E + L +S+ +K
Sbjct: 488 DRVAELRRMMRERQVSK-TPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKA 546
Query: 553 GGF 555
G+
Sbjct: 547 AGY 549
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/485 (43%), Positives = 306/485 (63%), Gaps = 11/485 (2%)
Query: 68 RLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQ 127
R++ FCA+S G +S+A +F + R + +N M+RA T+ L LYK
Sbjct: 25 RIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAF------TDKKEPATVLSLYKY 78
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
ML TG P+ TF FLL+ C + D G ++ Q V+ G FVQN ++ L+ +C
Sbjct: 79 MLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNC 138
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+ SAR LFD NRDVV+W A+I GY +SG + VA LF M ++N SW+++ITG+ Q
Sbjct: 139 MDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQI 198
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
G REALELF +MQ + +P+ I L+ACA+LGA+D G+W+H Y+ R+ + D
Sbjct: 199 GLFREALELFNDMQIAGF----RPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLD 254
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
++GTAL+DMY KCGCVE A VF EM +D A+T++IS A +G+ A + F M+
Sbjct: 255 RILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQN 314
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
EGV PN VTF+ LLSAC+ GLVE+G F M ++Y +EP V HY C++D+L RAG+
Sbjct: 315 EGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLE 374
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
+A+R++R MP+EPD +V GALL C++HG+VELG++ + L + + +V L +MYA
Sbjct: 375 DAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYA 434
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
A +++DV K R M+E+ ++K VPGCS +EVDG V EF V +E+VL+L G+
Sbjct: 435 SANQWEDVAKVRKGMEEKKVKK-VPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGID 493
Query: 548 KIMKN 552
K +K+
Sbjct: 494 KHLKS 498
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 341/540 (63%), Gaps = 32/540 (5%)
Query: 26 STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYAT 85
+T L ++ CK M++LK++H Q+IK+ Q D + LL F A+S L YA
Sbjct: 9 TTSLWPPSSFFPCKTMQDLKQLHAQMIKTA--QIRDPLA-AAELLRFSAVSDHRDLDYAR 65
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML--CTGISPDCLTFPFL 143
+F + R + ++YN +IRA SE+ND L ++ +M+ C+ + P+C TFP +
Sbjct: 66 KIFRSMHRPNCFSYNTLIRA----LSESNDP--CDALLVFIEMVEDCS-VEPNCFTFPSV 118
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF-------- 195
K C + G V+G VKFG+ D FV ++V+ ++++CG + A LF
Sbjct: 119 FKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDG 178
Query: 196 -DEMSNR------DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
D + ++ DVV WN MI GY+R G+L+VA +LF M +R++ SWN +I G+ Q G
Sbjct: 179 CDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSG 238
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
+EA+E+F+EMQ + V P+ +T+ SVL A + LGA++ GKWVH Y R+ + D
Sbjct: 239 HFKEAVEVFREMQMAEV----PPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDD 294
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
V+G+AL+DMY KCG +E+A VF+ +PK++ + W+ +I+ A++G K+ D F +ME
Sbjct: 295 VLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERA 354
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
GV P+ VT++GLLSAC+H+GLV +GRW F M V +EP + HY CM+D+L RAGL E
Sbjct: 355 GVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEE 414
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
+E LI +MP++PD +W ALLG C+MHGNVE+G++VA++L++L P + YV L ++YA
Sbjct: 415 SEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYAS 474
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
G ++ V K R +MKE +RK+ PGCS +E+DGV+HEF ++ +++ +L +S+
Sbjct: 475 LGNWEGVAKVRLMMKEMDVRKD-PGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSR 533
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/494 (41%), Positives = 313/494 (63%), Gaps = 18/494 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVF-SHIKR 93
+ +C ELK+IH +++KS LQ D +++ L S SYA +VF + R
Sbjct: 18 LQKCPTEVELKQIHARMLKSGLLQ--DPYAMTKFLS---FCLSSSFSSYAHDVFFNGFDR 72
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
D + +N+MIR +C S+ D + L LY +MLC + TFPFLLK C+
Sbjct: 73 PDTFLWNLMIRGLSC--SDQPD----RSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAF 126
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
++ + KFG D++ NS+I+ + G A +LFD + D VSWN++I GY
Sbjct: 127 QETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGY 186
Query: 214 LRSGDLDVALDLFRRM-KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+++G++D+AL LFR+M +K N SW ++I+G+VQ G +EAL+LF EMQ+S+V PD
Sbjct: 187 VKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNV----PPD 242
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+++AS LSAC+ LGA++ GKW+H Y ++ D V+ L+DMY KCG +E A GVFK
Sbjct: 243 NVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFK 302
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
M K WTA+IS +A +G G+EA F EM+ GV+PN +TF +L+AC+++GLVE+
Sbjct: 303 NMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEE 362
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G+ F + Y ++P + HY CM+D+L RAGL +EA R I+ MP++P+ +WG+LL C
Sbjct: 363 GKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKAC 422
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
Q+H N+ELGEK+ + LI++D + YV++ +++A ++D +TR LM+E+G+ K VP
Sbjct: 423 QIHKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVK-VP 481
Query: 513 GCSSVEVDGVVHEF 526
GCS++ ++G HEF
Sbjct: 482 GCSAISLEGTTHEF 495
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/491 (41%), Positives = 299/491 (60%), Gaps = 20/491 (4%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG---SLSYATNVFSHIKRSDL 96
++ EL + H I+KS + HS ++S + ++ YA ++FS I +
Sbjct: 19 SISELHQAHAHILKSGLI-----HSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNS 73
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
Y +N +IRA A N L ++ QML + PD TF F LK C G
Sbjct: 74 YMWNTIIRAYA------NSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEG 127
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++G V+K G+ DD+F+QN++I L+ +CG + AR L D M RDVVSWNA++ Y
Sbjct: 128 RQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAER 187
Query: 217 GDLDVA-LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
G +++A +F +N+ SWN++ITG+ GR E L LF++MQ + V KPD T
Sbjct: 188 GLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGV----KPDNCT 243
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ SVLSACA++GA+ G+WVH Y+ ++G+ D + TALVDMY KCG +E+A VF
Sbjct: 244 LVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCL 303
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+KD W ++IS + +G G+ A F EM EG +PN VTFV +LSAC+ +GL+++GR
Sbjct: 304 RKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGRE 363
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F +M HV+ ++P + HY CM+D+L R GL EAE L++ MP + VW +LLG C+ H
Sbjct: 364 MFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNH 423
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
GNVEL E+VAQ L++L P + +V L +MYA GR+ DV + R M+ +G+RK+ PGCS
Sbjct: 424 GNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKD-PGCS 482
Query: 516 SVEVDGVVHEF 526
+EVDG V+EF
Sbjct: 483 MIEVDGTVYEF 493
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/526 (41%), Positives = 317/526 (60%), Gaps = 47/526 (8%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK 92
+A+ CK+ +LK+IH Q+I + Q D + T+ + A+S ++ YA VF I
Sbjct: 32 SALQSCKSTEDLKKIHAQLIITG--QIKDTF-IATKTVESYAVSAR-NIDYAFWVFVGIN 87
Query: 93 RSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRL 151
D Y++ MIR K+ E K L+ Y M G+ + TF F+LK R
Sbjct: 88 YPDSYSWTTMIRGFVEAKNPE-------KALEFYGLMRQRGVELNKFTFLFVLKAYGLRP 140
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
G V+G++VK G C DVF +N++I +++ CG +T A +LFDEM N +VV+WN MI
Sbjct: 141 SYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMIT 200
Query: 212 -------------------------------GYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
GY + G +D+A LF M +R++ SW S+
Sbjct: 201 GCFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSM 260
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
I+ +VQ GRA EALELF+EM + V D I I S+LSACA +GA+D G+W+H Y++
Sbjct: 261 ISAYVQNGRAAEALELFKEMMLAGVS----ADSIIITSILSACAQIGALDMGRWIHAYMK 316
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
RS L DV + TALVDMY KCGC++ A+GVF MP+K+ +W AM+S A++G+G A +
Sbjct: 317 RSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALE 376
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F++ME+ GV PN +TFV +LSAC+H G VE+G F M + + P V HY CM+DIL
Sbjct: 377 LFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDIL 436
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
R GL +EA+ +IR+MP+EP+V +WGALL C++HG +GE V Y+ L + YV
Sbjct: 437 CRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYV 496
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
L +++A ++++V+KTR +MK+ G+ K++PG SS+E+D VVH+F
Sbjct: 497 LLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSIELDSVVHDF 542
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/498 (39%), Positives = 314/498 (63%), Gaps = 14/498 (2%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
++ C N+ ELK+IH Q++K ++ H ++RLL A +L+YA VF I
Sbjct: 18 LERCSNIGELKQIHGQLLKKGTIR---HKLTVSRLLTTYASMEFSNLTYARMVFDRISSP 74
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ +N MIRA S +ND + L LY QML I + TFPFLLK C+
Sbjct: 75 NTVMWNTMIRA----YSNSNDPE--EALLLYHQMLHHSIPHNAYTFPFLLKACSALSALA 128
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
++ Q++K G +V+ NS++ ++ G + SA +LFD + +RD+VSWN MI GY+
Sbjct: 129 ETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYI 188
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+ G++++A +F+ M ++N+ SW S+I GFV+ G +EAL L Q+M + + KPDKI
Sbjct: 189 KCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGI----KPDKI 244
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T++ LSACA LGA++ GKW+H Y+ ++ + D V+G AL+DMY KCG +++A VF ++
Sbjct: 245 TLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKL 304
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
KK WTA+I FA++G G EA D F +M+ G++P TF +L+AC+H+GLVE+G+
Sbjct: 305 EKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGK 364
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M Y ++P + HY CM+D+L RAG EA+ + SMP++P+ +WG+LL C +
Sbjct: 365 SLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHL 424
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
H ++ELG+++ ++LI+LDP + Y++L ++A AG +D+ + R+ +K +G+ +PGC
Sbjct: 425 HKHLELGKEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLN-LPGC 483
Query: 515 SSVEVDGVVHEFSMKGSP 532
S++ ++GV HEF P
Sbjct: 484 STITLNGVAHEFFAGAEP 501
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/519 (37%), Positives = 327/519 (63%), Gaps = 17/519 (3%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C +M++L++IH Q+IK+ + S R+L FC S +G ++YA VF+ I+ +L+
Sbjct: 6 CTSMKDLQKIHAQLIKTGLAKDTIAAS---RVLAFCT-SPAGDINYAYLVFTQIRNPNLF 61
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG--ISPDCLTFPFLLKECTKRLDGLV 155
+N +IR + S+ N + L+ M+ T P LT+P + K +
Sbjct: 62 VWNTIIRGFSQSSTPHN------AISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHE 115
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
GA ++G+V+K G+ +D F+QN+++++++ CGF+ A+ +FD + DVV+WN MIIG +
Sbjct: 116 GAQLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAK 175
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
G++D + LF +M RN SWNS+I+G+V+ GR EA+ELF MQ EE +KP + T
Sbjct: 176 CGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQ----EEGIKPSEFT 231
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ S+L+ACA LGA+ G+W+H Y+ ++ + ++ TA++DMY KCG +++A VFK P
Sbjct: 232 MVSLLNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAP 291
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
KK W ++I A++G G EA F ++E+ ++P+HV+F+G+L+AC H+G+V++ +
Sbjct: 292 KKGLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKD 351
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F++M Y +EP + HY+CM+D+L RAGL EAE LI+SMP+ PD +WG+LL C+ +
Sbjct: 352 YFLLMSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREY 411
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
GN+E+ ++ A+ + +LDP + ++ L ++YA F++ + R +KE+ + KE PGCS
Sbjct: 412 GNIEMAKQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKE-PGCS 470
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
+EV+G VHEF G +++ L+ L +K G
Sbjct: 471 LIEVNGEVHEFVAGGRLHPRSKDIYHALDDLGLTLKEMG 509
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/510 (39%), Positives = 318/510 (62%), Gaps = 15/510 (2%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C M++L++IH ++K+ + H ++ +L FCA S G ++YA VF+ I +L+
Sbjct: 34 CTTMKDLQKIHAHLLKTGLAK---HPLAVSPVLAFCATSPGGDINYAYLVFTQIHSPNLF 90
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLTFPFLLKECTKRLDGLVG 156
++N +IR S+++ H + L+ ML + + P LT+P + K + G
Sbjct: 91 SWNTIIRG----FSQSSTPHHA--ISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYG 144
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
A ++G+V+K G+ D F++N++I ++ CGF++ F E + D+V+WN+MI+G +
Sbjct: 145 AQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKC 204
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G++D + LF M RN SWNS+I+G+V+ GR REAL+LF +MQ EE +KP + T+
Sbjct: 205 GEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQ----EERIKPSEFTM 260
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
S+L+A A LGA+ G+W+H Y+R++ + +V++ +++DMY KCG + A+ VF+ P
Sbjct: 261 VSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPL 320
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
K +W MI A+NG EA F +E +RP+ VTFVG+L+AC +SGLV+K +
Sbjct: 321 KGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEY 380
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F +M Y +EP + HY+CM+D L RAGL EAE LIR+MP+ PD +W +LL C+ HG
Sbjct: 381 FSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHG 440
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
NVEL ++ A++++DLD + YV L ++YA + +F++ + R MKE+ I KE PGCS
Sbjct: 441 NVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKE-PGCSL 499
Query: 517 VEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
+EV+G +HEF G +E+ +LN L
Sbjct: 500 IEVNGEIHEFVAGGRLHPQAQEVYSLLNEL 529
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/517 (39%), Positives = 330/517 (63%), Gaps = 17/517 (3%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLI-TRLLFFCALSVSGSLSYATNVFSHIKRSD 95
+C NM++L++IH IIK+ HH++ +R+L FCA S SG ++YA +F+ I +
Sbjct: 34 QCTNMKDLQKIHAHIIKTGL----AHHTVAASRVLTFCA-SSSGDINYAYLLFTTIPSPN 88
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
LY +N +IR S ++ H + L+ MLC+ + P LT+P + K + G
Sbjct: 89 LYCWNTIIRG----FSRSSTPHLA--ISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAGYD 142
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
GA ++G+VVK G+ D F+QN++I ++ G ++ AR +FDE+ + DVV+ N+MI+G +
Sbjct: 143 GAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAK 202
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
G++D + LF M R +WNS+I+G+V+ R EALELF++MQ E V+P + T
Sbjct: 203 CGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQG----ERVEPSEFT 258
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ S+LSACA+LGA+ HG+WVH Y++R + +V++ TA++DMY KCG + +A VF+ P
Sbjct: 259 MVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASP 318
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+ W ++I ALNGY ++A + F ++EA ++P+HV+F+G+L+AC + G V K R
Sbjct: 319 TRGLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARD 378
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F +M + Y +EP + HY CM+++L +A L EAE+LI+ MP++ D +WG+LL C+ H
Sbjct: 379 YFSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKH 438
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
GNVE+ ++ AQ + +L+P + + Y+ + ++ A + +F++ + R LM+ER KE PGCS
Sbjct: 439 GNVEIAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKE-PGCS 497
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
S+E+ G VHEF G E+ +LN S +++
Sbjct: 498 SIELYGEVHEFLAGGRLHPKAREIYYLLNDSSFALQD 534
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/521 (39%), Positives = 301/521 (57%), Gaps = 50/521 (9%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG---SLSYATNVFSHIKRSDL 96
++ EL + H I+KS + HS ++S + ++ YA ++FS I +
Sbjct: 19 SISELHQAHAHILKSGLI-----HSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNS 73
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
Y +N +IRA A N L ++ QML + PD TF F LK C G
Sbjct: 74 YMWNTIIRAYA------NSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEG 127
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++G V+K G+ DD+F+QN++I L+ +CG + AR L D M RDVVSWNA++ Y
Sbjct: 128 RQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAER 187
Query: 217 GDLDVALDLFRRMKKR-------------------------------NIFSWNSIITGFV 245
G +++A LF M +R N+ SWN++ITG+
Sbjct: 188 GLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYS 247
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
GR E L LF++MQ + VKPD T+ SVLSACA++GA+ G+WVH Y+ ++G+
Sbjct: 248 HAGRFSEVLVLFEDMQHAG----VKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGIS 303
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
D + TALVDMY KCG +E+A VF +KD W ++IS + +G G+ A F EM
Sbjct: 304 IDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEM 363
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
EG +PN VTFV +LSAC+ +GL+++GR F +M HV+ ++P + HY CM+D+L R GL
Sbjct: 364 LVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGL 423
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDM 485
EAE L++ MP + VW +LLG C+ HGNVEL E+VAQ L++L P + +V L +M
Sbjct: 424 LEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNM 483
Query: 486 YAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YA GR+ DV + R M+ +G+RK+ PGCS +EVDG V+EF
Sbjct: 484 YASMGRWKDVMEVRQKMRAQGVRKD-PGCSMIEVDGTVYEF 523
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/545 (38%), Positives = 329/545 (60%), Gaps = 31/545 (5%)
Query: 29 LILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVF 88
LIL CK R+LK++H IK+ +Q + + + FCA S S + YA VF
Sbjct: 20 LILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIK---FCAFS-SRDIDYARAVF 75
Query: 89 SHIKRSDLYTYNIMIRANACKSSETNDTH-SGKCLKLYKQMLCTG-ISPDCLTFPFLLKE 146
+ + + +N ++R A ETND H + L L+ MLC G + P+ TFP +LK
Sbjct: 76 RQMPEPNCFCWNTILRVLA----ETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKA 131
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF----------- 195
C + G ++G +VKFG +D FV ++++ +++ C + A LF
Sbjct: 132 CARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSC 191
Query: 196 -DEMSNR----DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
E+ R +VV WN MI G +R GD+ A +LF M +R++ SWN +I+G+ Q G
Sbjct: 192 QMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHF 251
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
EA+ LFQEMQSS+++ P+ +T+ SVL A A +GA++ GKW+H Y ++ ++ D V+
Sbjct: 252 IEAINLFQEMQSSNID----PNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVL 307
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
G+ALVDMY KCG ++ A VF+ +PK++ + W+A+I FA++G ++A F M GV
Sbjct: 308 GSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGV 367
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
PN V ++G+LSAC+H+GLVE+GR F M V ++P + HY CM+D+L RAG EAE
Sbjct: 368 TPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAE 427
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
LIR+MP+EPD +W ALLG C+MH N+++GE+VA+ L++L P + YV L ++YA G
Sbjct: 428 ELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLG 487
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
++ V + R MK IRK+ PGCS +E+ G++HEF ++ +E+ +L +S +
Sbjct: 488 NWEAVARVRLKMKGMDIRKD-PGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKL 546
Query: 551 KNGGF 555
++ G+
Sbjct: 547 RSNGY 551
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/528 (40%), Positives = 322/528 (60%), Gaps = 28/528 (5%)
Query: 7 MVSYSLLNSPAK-----VSPPNKESTKL-ILRNAIDECKNMRELKEIHTQIIKSPCLQTN 60
+ S+ + SP + V P + E+ K+ +LRN + EL+++H QIIK TN
Sbjct: 5 LSSFPIPQSPNRNQIHHVKPQSSETLKIDLLRNF----NSPFELRQVHAQIIK-----TN 55
Query: 61 DHHSLI--TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHS 118
S++ TR+ CA + S YA +F +++ T+ N+C +
Sbjct: 56 APLSILPLTRVGLVCAFT--PSFHYAQQIFECVEKQKPETF----VWNSCLKALAEGDSP 109
Query: 119 GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSV 178
+ L+ ++ + PD T +L+ C LD G ++G V K G ++++QN +
Sbjct: 110 IDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMI 169
Query: 179 ISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWN 238
+ L+ +CG + AR+LF++M RDVV+WN MI ++ GD + A DLF RM +RN+ SW
Sbjct: 170 VHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWT 229
Query: 239 SIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY 298
S+I G+VQ G+A+EA+ LF +M+ + V K +++T+ +VL+ACA LGA+D G +H Y
Sbjct: 230 SMIAGYVQCGKAKEAIHLFAKMEEAGV----KCNEVTVVAVLAACADLGALDLGMRIHEY 285
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
R G +V I L+DMY KCGC+E A VF+EM ++ ++W+AMI A++G +EA
Sbjct: 286 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEA 345
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F +M G+ PN VTF+GLL AC+H GL+ +GR F M Y + P + HY CM+D
Sbjct: 346 LRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVD 405
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+LSRAGL EA I +MPM+P+ VWGALLG C++H NVE+ E+ ++L++LDPLN +
Sbjct: 406 LLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY 465
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L ++YA+AGR++D + R MK+R ++K PG SS+ VDGVVHEF
Sbjct: 466 YVVLSNIYAEAGRWEDTARVRKFMKDRQVKK-TPGWSSITVDGVVHEF 512
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/545 (38%), Positives = 329/545 (60%), Gaps = 31/545 (5%)
Query: 29 LILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVF 88
LIL CK R+LK++H IK+ +Q + + + FCA S S + YA VF
Sbjct: 20 LILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIK---FCAFS-SRDIDYARAVF 75
Query: 89 SHIKRSDLYTYNIMIRANACKSSETNDTH-SGKCLKLYKQMLCTG-ISPDCLTFPFLLKE 146
+ + + +N ++R A ETND H + L L+ MLC G + P+ TFP +LK
Sbjct: 76 RQMPEPNCFCWNTILRILA----ETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKA 131
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF----------- 195
C + G ++G +VKFG +D FV ++++ +++ C + A LF
Sbjct: 132 CARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSC 191
Query: 196 -DEMSNR----DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
E+ R +VV WN MI G +R GD+ A +LF M R++ SWN +I+G+ Q G
Sbjct: 192 QMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHF 251
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
EA+ LFQEMQSS+++ P+ +T+ SVL A A +GA++ GKW+H Y ++ ++ D V+
Sbjct: 252 IEAINLFQEMQSSNID----PNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVL 307
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
G+ALVDMY KCG +++A VF+ +PK++ + W+A+I FA++G ++A F M GV
Sbjct: 308 GSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGV 367
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
PN V ++G+LSAC+H+GLVE+GR F M V ++P + HY CM+D+L RAG EAE
Sbjct: 368 TPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAE 427
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
LIR+MP+EPD +W ALLG C+MH N+++GE+VA+ L++L P + YV L ++YA G
Sbjct: 428 ELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLG 487
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
++ V + R MK IRK+ PGCS +E+ G++HEF ++ +E+ +L +S +
Sbjct: 488 NWEAVARVRLKMKGMDIRKD-PGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKL 546
Query: 551 KNGGF 555
++ G+
Sbjct: 547 RSNGY 551
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/561 (36%), Positives = 329/561 (58%), Gaps = 50/561 (8%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKS-----PCLQTNDHHSLITRLLFFCA 74
S P E+ L L + CK+M LK+IH++ IK+ P +Q ++L FC
Sbjct: 9 SSPVTENPPLSL---FETCKSMYHLKQIHSRTIKTGIICNPIIQN--------KILSFCC 57
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRAN---ACKSSETNDTHSGKCLKLYKQMLCT 131
G + YA +F I ++++NIM + AC + LY +ML
Sbjct: 58 SREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLG---------VSLYLEMLER 108
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
+ PDC T+PFL K T+ + +G ++ VVK+G+ +VF N++I+++ CG + A
Sbjct: 109 NVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMA 168
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLR-----------------SGDLDVALDLFRRMKKRNI 234
R +FD DVV+WNAMI GY R +G +D A F +M +R+
Sbjct: 169 RGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDH 228
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
SW ++I G+++ +EAL LF+EMQ+S + KPD+ T+ SVL+ACA LGA++ G+W
Sbjct: 229 VSWTAMIDGYLRLNCYKEALMLFREMQTSKI----KPDEFTMVSVLTACAQLGALELGEW 284
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
+ Y+ ++ + D +G AL+DMY KCG VE A +F +P++D WTAM+ A+NG
Sbjct: 285 IRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGC 344
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
G+EA + F +M V P+ VT+VG+LSAC H+G+V++G+ F M + +EP++ HY
Sbjct: 345 GEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYG 404
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
CM+D+L +AG EA +I++MPM+P+ VWGALLG C++H + E+ E+ + +++L+P
Sbjct: 405 CMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPN 464
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKV 534
N A YV C++YA ++D +++ R +M +RGI+K PGCS +E++G+VHEF
Sbjct: 465 NGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKK-TPGCSLIEMNGIVHEFVAGDQSHP 523
Query: 535 VKEELVLILNGLSKIMKNGGF 555
+E+ LN ++ +K G+
Sbjct: 524 QTKEIYGKLNKMTSDLKIAGY 544
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/490 (42%), Positives = 300/490 (61%), Gaps = 15/490 (3%)
Query: 67 TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYK 126
++++ FCAL SGSL YA VF+ I +T N +IR TN + + Y+
Sbjct: 14 SKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGY------TNKNLPRQAILFYQ 67
Query: 127 QMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
M+ G+ PD TFP L K C +G ++ K G D ++QN++++++ CG
Sbjct: 68 LMMLQGLDPDRFTFPSLFKSCGVLCEG---KQLHCHSTKLGFASDAYIQNTLMNMYSNCG 124
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK-KRNIFSWNSIITGFV 245
+ SAR +FD+M N+ VVSW MI Y + A+ LFRRM+ N+F WN +I G V
Sbjct: 125 CLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHV 184
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
+ EAL LF EMQ S V K DK+T+AS+L AC +LGA++ GKW+H Y+ + ++
Sbjct: 185 EDSDYEEALSLFNEMQLSGV----KGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIE 240
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
DV +GTALVDMY KCG +E A VF+EMP+KD + WTA+I A+ G G +A + F EM
Sbjct: 241 VDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEM 300
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
+ V+P+ +TFVG+L+AC+H+GLV +G F M + Y ++P + HY CM+D+L RAG
Sbjct: 301 QMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGR 360
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDM 485
+EAE LI++MPM PD FV LL C++HGN+ + E+ AQ LI+LDP N YV L ++
Sbjct: 361 IAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNI 420
Query: 486 YAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNG 545
Y+ ++ KK R LM ER I+K PGCS++EV GVVHEF E+ L+
Sbjct: 421 YSSMKNWEAAKKMRELMVERNIKKP-PGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDD 479
Query: 546 LSKIMKNGGF 555
+ + +K+ G+
Sbjct: 480 MMRRLKSAGY 489
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/528 (40%), Positives = 322/528 (60%), Gaps = 28/528 (5%)
Query: 7 MVSYSLLNSPAK-----VSPPNKESTKL-ILRNAIDECKNMRELKEIHTQIIKSPCLQTN 60
+ S+ + SP + V P + E+ K+ +LRN + EL+++H QIIK TN
Sbjct: 5 LSSFPIPQSPNRNQIHNVKPQSSETLKIDLLRNF----NSPFELRQVHAQIIK-----TN 55
Query: 61 DHHSLI--TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHS 118
S++ TR+ CA + S YA +F +++ T+ N+C +
Sbjct: 56 APLSILPLTRVGLVCAFT--PSFHYAQQIFKCVEKQKPETF----VWNSCLKALAEGDSP 109
Query: 119 GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSV 178
+ L+ ++ + PD T +L+ C LD G ++G V K G ++++QN +
Sbjct: 110 IDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMI 169
Query: 179 ISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWN 238
+ L+ +CG + AR+LF++M RDVV+WN MI ++ GD + A DLF RM +RN+ SW
Sbjct: 170 VHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWT 229
Query: 239 SIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY 298
S+I G+VQ G+A+EA+ LF +M+ + V K +++T+ +VL+ACA LGA+D G +H Y
Sbjct: 230 SMIAGYVQCGKAKEAIHLFAKMEEAGV----KCNEVTVVAVLAACADLGALDLGMRIHEY 285
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
R G +V I L+DMY KCGC+E A VF+EM ++ ++W+AMI A++G +EA
Sbjct: 286 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEA 345
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F +M G+ PN VTF+GLL AC+H GL+ +GR F M Y + P + HY CM+D
Sbjct: 346 LRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVD 405
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+LSRAGL EA I +MPM+P+ VWGALLG C++H NVE+ E+ ++L++LDPLN +
Sbjct: 406 LLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY 465
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L ++YA+AGR++D + R MK+R ++K PG SS+ VDGVVHEF
Sbjct: 466 YVVLSNIYAEAGRWEDTARVRKFMKDRQVKK-TPGWSSITVDGVVHEF 512
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/478 (42%), Positives = 308/478 (64%), Gaps = 7/478 (1%)
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
S ++ T FSH + + +N +IRA+ ++ T THS + ++ +M G+ PD
Sbjct: 9 SSTHPTLHFSH-PTLESFLWNTLIRAHVQARAQPTGPTHSP--ISIFVRMRFHGVQPDFH 65
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TFPFLL+ +G SV+ Q+++FG+ D FVQ S+IS++ +CG + AR +FDE+
Sbjct: 66 TFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEI 125
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D+ SWN++I ++G +D+A +LF M +RN+ SW+ +I G+V+ G+ +EAL LF+
Sbjct: 126 PQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFR 185
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ V + V+P++ T++ VL+AC LGA++HGKW H Y+ + G+ DVV+GTAL+DMY
Sbjct: 186 EMQMLGVND-VRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMY 244
Query: 319 GKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
KCG VE+A VF + P KD +AW+AMIS A++G +E F +M +GVRPN VTF
Sbjct: 245 AKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTF 304
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+ + AC H GLV +G+ M Y + P + HY CM+D+ RAG EA +++SMP
Sbjct: 305 LAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMP 364
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
MEPDV VWGALL G +MHG++E E + LI+L+P N YV L ++YAK GR++DV+
Sbjct: 365 MEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRH 424
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R+LM+ GI+K VPGCS +EV GV+HEF + ++ ++L + + +K G+
Sbjct: 425 VRDLMETMGIKK-VPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGY 481
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/517 (40%), Positives = 320/517 (61%), Gaps = 16/517 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+++C+ M ++K++H+ +I S I L A+S + +S+A +F +
Sbjct: 17 LEQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLF---AVSSNADISHAYKLFLSLPHR 73
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ +N +IR K+ + L LYK ML TG P+ TF F+L+ CT +
Sbjct: 74 TTFIWNTIIRIFVEKN------ENATALSLYKNMLQTGFLPNNYTFSFVLRACTD--NSP 125
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
VG + + QV+K G FV N +I L+ V +AR LFD + RDV++W A+I GY+
Sbjct: 126 VGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYV 185
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+SG ++ A +LF +M +RN SW+++ITG+V G REALELF ++Q + + +P+
Sbjct: 186 KSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGL----RPNHA 241
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
I L+AC+YLG++DHG+W+H Y+ R+G + D V+GTALVDMY KCGC+E A VF++M
Sbjct: 242 GIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKM 301
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
P KD A+T++IS A +G +A F M++E V PN VTF+ +LSAC+ GLV++G
Sbjct: 302 PDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGL 361
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M VY +EP V HY CM+D+L RAGL EA+RL+R MPMEPD +V GALL C++
Sbjct: 362 RIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRV 421
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
HG+VELG++ + L++ + +V L +MYA + ++D V K R M + ++K VPGC
Sbjct: 422 HGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKK-VPGC 480
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
SS+E+DG V EF + E+++L+L G+ +K
Sbjct: 481 SSIEIDGSVSEFIAGDMSYLRVEDVMLVLLGIDNHLK 517
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/604 (37%), Positives = 334/604 (55%), Gaps = 84/604 (13%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIK---SPCLQTNDHHSLITRLLFFCALSV 77
P + KL + + CK+++ LK+IH IIK SP Q ++ TRL CA S+
Sbjct: 15 PHDFNPHKLSFLSTLQTCKSIKGLKQIHASIIKTMPSPDAQL----TISTRLSALCAQSL 70
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
YA ++ + ++ +L YN +IR A + ND+ G L +YKQML GI PD
Sbjct: 71 PIDPRYALSLLAQLRTPNLPLYNAIIRGLA---TSNNDSIEG--LVVYKQMLSKGIVPDN 125
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T PF+LK C + G V+GQ +K G+ DV+V N+++ ++ C + SAR +FD
Sbjct: 126 YTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDT 185
Query: 198 MSNRDVVSWNAMIIGYL-----------------------------------RSGDLDVA 222
RD+VSW MI GY+ R GDL +
Sbjct: 186 SPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLG 245
Query: 223 LDLFRRMKKR-----NIFSWNSIITGFVQGGRAREALELFQEMQSSSV------------ 265
L R + + ++F N+++ +++ G A A ++FQEM +V
Sbjct: 246 RKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQ 305
Query: 266 -----EEM----------VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
E + VKPD +T+ +VL++CA LG ++ GKWVH YL R+ + D I
Sbjct: 306 KGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFI 365
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
G ALVDMY KCG +++A VF+ M +KD ++TAMI A++G G +A D F EM G+
Sbjct: 366 GNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGI 425
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
P+ VTFVG+L+AC+H GLVE+GR F M +Y + P + HY CM+D+L RAGL +EAE
Sbjct: 426 EPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAE 485
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
IR+MP+EPD FV GALLG C++HG VELGE V + + ++P YV + ++Y+ A
Sbjct: 486 EFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSAN 545
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM--KGSPKVVKEELVLILNGLSK 548
R+ D K R MKER + K PGCSS+E+DGV+HEF K PK+ +E+ +L+ +
Sbjct: 546 RWRDALKLRKTMKERNLEK-TPGCSSIELDGVIHEFQKGDKSHPKI--KEIYKLLDEIMS 602
Query: 549 IMKN 552
+KN
Sbjct: 603 HLKN 606
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/540 (38%), Positives = 313/540 (57%), Gaps = 48/540 (8%)
Query: 15 SPAKVSPPNKEST-KLILRNA----IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
SP K +P N + +L N +++CK++ +LK+I +Q++ + ++ S RL
Sbjct: 32 SPHKENPINWNTNHSFVLSNPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASS---RL 88
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
+ FCA+S L Y TN+ + + + +++N+ IR + + + + LYK++L
Sbjct: 89 IAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGF------LDSENPREAVVLYKRVL 142
Query: 130 -CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG-- 186
C G PD T+P L K C + +G+ + G V+ G D+FV N+VI L ++CG
Sbjct: 143 QCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDL 202
Query: 187 ---------------------------FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ SAR LFD M+N+ +VSW M++GY +SG L
Sbjct: 203 DGARKMFDKSCVRDLVSWNSMINGYCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLL 262
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
D+A LF M +++ WN++I G+V R +EAL LF EMQ+ ++ PD++T+ S
Sbjct: 263 DMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNI----NPDEVTMVSC 318
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
LSAC+ LGA+D G W+H Y+ + L +V +GTAL+DMY KCG + +A VF+E+P +++
Sbjct: 319 LSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNS 378
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
L WTA+IS AL+G A F EM V P+ VTF+GLLSAC H GLVE+GR F
Sbjct: 379 LTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 438
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + + P + HY+CM+D+L RAGL EAE LI+SMP+E D VWGAL C++HGNV
Sbjct: 439 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL 498
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
+GE+ A L+ +DP + YV L +MY +A + + K R LM++RG+ K S + V
Sbjct: 499 MGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPDSWSLLSV 558
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 324/548 (59%), Gaps = 51/548 (9%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS- 80
P K KL +I +++ L ++H +++S Q DH+ ++ L C + S
Sbjct: 30 PQKTVLKLFDSKSI---TSLQYLTQLHGLVLRSGHFQ--DHY--VSGALLKCYANPHFSN 82
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
+A VFS I +++ +NI+I+ E N K + Y +M+ P+ T+
Sbjct: 83 FDFALKVFSSIPNPNVFIWNIVIKG----CLENNKLF--KAIYFYGRMVIDA-RPNKFTY 135
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ------------------------- 175
P L K C+ G ++G VVK G+ DV ++
Sbjct: 136 PTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGES 195
Query: 176 -----NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
N++I ++ CG + +A+ LF +M +++ SWN MI G + G+L A LF M
Sbjct: 196 DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMS 255
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+R+ SW+S++ G++ GR +EALE+FQ+MQ E +P + ++SVL+AC+ +GAID
Sbjct: 256 ERDEISWSSMVDGYISAGRYKEALEIFQQMQ----REETRPGRFILSSVLAACSNIGAID 311
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G+WVH YL+R+ + D V+GTAL+DMY KCG ++ + VF+EM +++ W AMI A
Sbjct: 312 QGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLA 371
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
++G ++A + F +++ ++PN +T VG+L+ACAH+G V+KG F MR Y V+P +
Sbjct: 372 IHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPEL 431
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+D+L R+GLFSEAE LI SMPM+P+ VWGALLG C++HGN +L E+V + L++
Sbjct: 432 EHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLE 491
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM-K 529
L+P N YV L ++YAK GRFDDV K R LMK+RGI K VPG S V+++G VHEF M
Sbjct: 492 LEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGI-KTVPGVSIVDLNGTVHEFKMGD 550
Query: 530 GSPKVVKE 537
GS +KE
Sbjct: 551 GSHPQMKE 558
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 323/548 (58%), Gaps = 51/548 (9%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS- 80
P K KL +I +++ L ++H +++S Q DH+ ++ L C + S
Sbjct: 30 PQKTVLKLFDSKSI---TSLQYLTQLHALVLRSGHFQ--DHY--VSGALLKCYANPHFSN 82
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
+A VFS I +++ +NI+I+ E N K + Y +M+ P+ T+
Sbjct: 83 FDFALKVFSSIPNPNVFIWNIVIKG----CLENNKLF--KAIYFYGRMVIDA-RPNKFTY 135
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ------------------------- 175
P L K C+ G ++G VVK G+ DV ++
Sbjct: 136 PTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGES 195
Query: 176 -----NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
N++I ++ CG + +A+ LF +M +++ SWN MI G + G+L A LF M
Sbjct: 196 DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMS 255
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+R+ SW+S++ G++ GR +EALE+FQ+MQ E +P + ++SVL+AC+ +GAID
Sbjct: 256 ERDEISWSSMVDGYISAGRYKEALEIFQQMQ----REETRPGRFILSSVLAACSNIGAID 311
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G+WVH YL+R+ + D V+GTAL+DMY KCG ++ + VF+EM +++ W AMI A
Sbjct: 312 QGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLA 371
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
++G ++A + F +++ ++PN +T VG+L+ACAH+G V+KG F MR Y V+P +
Sbjct: 372 IHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPEL 431
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+D+L R+GLFSEAE LI SMPM+P+ VWGALLG C++HGN +L E+V + L++
Sbjct: 432 EHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLE 491
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM-K 529
L+P N YV L ++YAK GRFDDV K R LMK RGI K VPG S V+++G VHEF M
Sbjct: 492 LEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGI-KTVPGVSIVDLNGTVHEFKMGD 550
Query: 530 GSPKVVKE 537
GS +KE
Sbjct: 551 GSHPQMKE 558
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/572 (38%), Positives = 338/572 (59%), Gaps = 27/572 (4%)
Query: 4 KLQMVSYSLLNSPAKVSPPNKESTKL-ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH 62
KL +S S L S P K + L IL + C N+++ I +Q+I + +
Sbjct: 5 KLNQLS-SALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFA 63
Query: 63 HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
S RLL F S L Y+ +F I+ S+ + +N M+RA +S + K L
Sbjct: 64 AS---RLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNS------AEKAL 114
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
LYK M+ + PD T+P +++ C RL G ++ V+K G DV+VQN++I+++
Sbjct: 115 LLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMY 174
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD---LFRRMKKRNIFSWNS 239
CG + AR LFDE D VSWN+++ GY++ GD+ ++ LF M ++++ SW++
Sbjct: 175 AVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSA 234
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I+G+ Q G EAL +F EM ++ + + D++ + SVLSACA+L + GK +HG +
Sbjct: 235 LISGYEQNGMYEEALVMFIEMNANGM----RLDEVVVVSVLSACAHLSIVKTGKMIHGLV 290
Query: 300 RRSGLDCDVVIGTALV----DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
R G++ V + AL+ DMY KCGCVE A VF M +K +W A+I A+NG
Sbjct: 291 IRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLV 350
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+ + D F EM+ GV PN +TF+G+L AC H GLV++GR F M + +EP+V HY C
Sbjct: 351 ERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGC 410
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
M+D+L RAGL +EAE+LI SMPM PDV WGALLG C+ HG+ E+GE+V + LI+L P +
Sbjct: 411 MVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDH 470
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF--SMKGSPK 533
F+V L +++A G ++DV + R +MK++G+ K PGCS +E +GVVHEF K P
Sbjct: 471 DGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVK-TPGCSLIEANGVVHEFLAGDKTHPW 529
Query: 534 VVKEELVLILNGLSKIMKNGGFGQYIRGLSME 565
+ K E +LN ++K +K G+ +S++
Sbjct: 530 INKVE--GMLNEMAKRLKMEGYAPDTNEVSLD 559
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/496 (39%), Positives = 300/496 (60%), Gaps = 16/496 (3%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + + +C N++ L + H ++ Q N L++R + C S G Y+ ++F+H
Sbjct: 44 LLSLLKQCSNLKHLHQTHCFMLSRGLDQDN---ILLSRFIEAC--SSLGFSHYSHSIFTH 98
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
R D+Y YN +I+A +N + + + LY ++L + + D + PF+LK +
Sbjct: 99 KTRPDIYLYNTIIKA------LSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRL 152
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
L VG ++ Q + G+ D+ V ++I ++ +CG V+ AR LFD + RDV WNAM+
Sbjct: 153 LAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMV 212
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY + GD+D A LF RM +RN+ SW ++I G+ Q R EA+ +F+ MQ VE
Sbjct: 213 AGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVE---- 268
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD+I + + LSACA+LGA++ G+W+H Y+ + GL V + AL+DMY KCG +E+A V
Sbjct: 269 PDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEV 328
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
FK M K + WT+MI AL+G G+EA + F ME ++PN +TFV +LSAC H GLV
Sbjct: 329 FKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLV 388
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
E GRW F M Y ++P + HY CMID+L RAG EA+ L+R MP E + +WG+LL
Sbjct: 389 EMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLA 448
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
++HG+ ELG++ Q+LI ++P N Y L ++YA ++++ R +M++ G++K
Sbjct: 449 AARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKK- 507
Query: 511 VPGCSSVEVDGVVHEF 526
+PG S +EV+ VHEF
Sbjct: 508 MPGGSCIEVNNRVHEF 523
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/496 (39%), Positives = 300/496 (60%), Gaps = 16/496 (3%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + + +C N++ L + H ++ Q N L++R + C S G Y+ ++F+H
Sbjct: 44 LLSLLKQCSNLKHLHQTHCFMLSRGLDQDN---ILLSRFIEAC--SSLGFSHYSHSIFTH 98
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
R D+Y YN +I+A +N + + + LY ++L + + D + PF+LK +
Sbjct: 99 KTRPDIYLYNTIIKA------LSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRL 152
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
L VG ++ Q + G+ D+ V ++I ++ +CG V+ AR LFD + RDV WNAM+
Sbjct: 153 LAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMV 212
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY + GD+D A LF RM +RN+ SW ++I G+ Q R EA+ +F+ MQ VE
Sbjct: 213 AGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVE---- 268
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD+I + + LSACA+LGA++ G+W+H Y+ + GL V + AL+DMY KCG +E+A V
Sbjct: 269 PDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEV 328
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
FK M K + WT+MI AL+G G+EA + F ME ++PN +TFV +LSAC H GLV
Sbjct: 329 FKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLV 388
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
E GRW F M Y ++P + HY CMID+L RAG EA+ L+R MP E + +WG+LL
Sbjct: 389 EMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLA 448
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
++HG+ ELG++ Q+LI ++P N Y L ++YA ++++ R +M++ G++K
Sbjct: 449 AARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKK- 507
Query: 511 VPGCSSVEVDGVVHEF 526
+PG S +EV+ VHEF
Sbjct: 508 MPGGSCIEVNNRVHEF 523
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/524 (39%), Positives = 318/524 (60%), Gaps = 23/524 (4%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
+++ LK +H +++ L ++ L+ ++L F G+ +Y+ +F K +++
Sbjct: 21 NSLKHLKHVHAALLR---LGLDEDSYLLNKVLRFSF--NFGNTNYSHRIFHQTKEPNIFL 75
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+N MI ND+ + +++Y M G+SPD TFPFLLK C + LD +G
Sbjct: 76 FNTMIHGLV-----LNDSFQ-ESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIK 129
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
++G VVK G D FV S++SL+ CGF+ +A +FD++ ++V +W A+I GY+ G
Sbjct: 130 LHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGK 189
Query: 219 LDVALDLFRR-------MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
A+D+FRR M +++I SW+S+I G+ G +EAL+LF +M + E +P
Sbjct: 190 CREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKM----LNEGFRP 245
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
D + VL ACA LGA++ G W + R+ + V+GTAL+DMY KCG ++ A+ VF
Sbjct: 246 DCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVF 305
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+ M KKD + W A IS A++G+ K AF F +ME G+ P+ TFVGLL AC H+GLV+
Sbjct: 306 RGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVD 365
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+GR F M V+ + P + HY CM+D+L RAG EA +L++SMPME + VWGALLGG
Sbjct: 366 EGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG 425
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C++H + +L E V + LI L+P N YV L ++Y+ + +++D K R++M ERGI+K V
Sbjct: 426 CRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKK-V 484
Query: 512 PGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
PG S +EVDGVVHEF + + + E++ L L K +K G+
Sbjct: 485 PGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGY 528
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/508 (40%), Positives = 309/508 (60%), Gaps = 22/508 (4%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P+K + +++ A E + + K H +IK L +D L + + F+ G L
Sbjct: 134 PDKFTFPFLIK-AASELEELFTGKAFHGMVIK--VLLGSDVFILNSLIHFYAK---CGEL 187
Query: 82 SYATNVFSHIKRSDLYTYNIMIRA---NACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
VF +I R D+ ++N MI A C + L+L+++M + P+ +
Sbjct: 188 GLGYRVFVNIPRRDVVSWNSMITAFVQGGCPE---------EALELFQEMETQNVKPNGI 238
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C K+ D G V+ + + + + + + N+++ ++ CG V A+ LFD+M
Sbjct: 239 TMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKM 298
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+D+VSW M++GY + G+ D A +F M ++I +WN++I+ + Q G+ +EALELF
Sbjct: 299 PEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFH 358
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
E+Q S + KPD++T+ S LSACA LGA+D G W+H Y+++ G+ + + T+L+DMY
Sbjct: 359 ELQLS---KTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMY 415
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG +++A VF + +KD W+AMI+ A++G+GK+A F +M+ + V+PN VTF
Sbjct: 416 CKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFT 475
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+L AC+H GLVE+GR F M VY V P V HYACM+DIL RAGL EA LI MPM
Sbjct: 476 NILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPM 535
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
P VWGALLG C +H NV L E+ LI+L+P NH YV L ++YAKAG++D V
Sbjct: 536 APAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGL 595
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R LM++ G++KE PGCSS+EVDG+VHEF
Sbjct: 596 RKLMRDVGLKKE-PGCSSIEVDGIVHEF 622
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/494 (30%), Positives = 234/494 (47%), Gaps = 98/494 (19%)
Query: 12 LLNSPAKVSPPNKESTKLILRN-----------AIDECKNMRELKEIHTQIIKSPCLQTN 60
L++ P S P + L N ID+C ++LK+IH Q++++
Sbjct: 8 LVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLF--F 65
Query: 61 DHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
D S +RL+ ALS SL YA VF I +LYT+N +IRA A S +N S
Sbjct: 66 DPFS-ASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA---SSSNPHQS-- 119
Query: 121 CLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
L ++ +ML PD TFPFL+K ++ + G + +G V+K + DVF+ NS+I
Sbjct: 120 -LLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLI 178
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
+ CG + +F + RDVVSWN+MI +++ G + AL+LF+ M+ +N
Sbjct: 179 HFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQN------ 232
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
VKP+ IT+ VLSACA + G+WVH Y+
Sbjct: 233 -----------------------------VKPNGITMVGVLSACAKKSDFEFGRWVHSYI 263
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVE-------------------------------RAY 328
R+ + + + A++DMY KCG VE A
Sbjct: 264 ERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQ 323
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME-AEGVRPNHVTFVGLLSACAHS 387
G+F MP +D AW A+IS + G KEA + F E++ ++ +P+ VT V LSACA
Sbjct: 324 GIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQL 383
Query: 388 GLVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
G ++ G W HVY+ ++ + + +ID+ + G +A + S+ + DVF
Sbjct: 384 GAMDLGGWI-----HVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERK-DVF 437
Query: 444 VWGALLGGCQMHGN 457
VW A++ G MHG+
Sbjct: 438 VWSAMIAGLAMHGH 451
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/520 (37%), Positives = 322/520 (61%), Gaps = 28/520 (5%)
Query: 28 KLILRNA----IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS---GS 80
KL L+N ++ C + LK IH +I++ H++ C +S+S
Sbjct: 11 KLELKNPKLSFLESCTTLSHLKIIHAHLIRA--------HTIFDVFAASCLISISINKNL 62
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
L YA VF I+ +L+ YN IR + S+ D K Y Q G+ PD LT+
Sbjct: 63 LDYAAQVFYQIQNPNLFIYNSFIRGFS--GSKDPD----KSFHFYVQSKRNGLVPDNLTY 116
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
PFL+K CT++ +G +GQ+++ G DV+VQNS+++++ G + SA +F +S
Sbjct: 117 PFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISC 176
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
DVVSW +M+ GY++SGD+ A LF +M ++N+ +W+ +I+G+ + +A+EL+ +
Sbjct: 177 LDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLL 236
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
QS E V ++ + SV+++CA+LGA++ G+ H Y+ R+ + ++++GTALVDMY +
Sbjct: 237 QS----EGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYAR 292
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG +++A VF ++P +D L+WT +I+ FA++GY ++A + F ME G+ P +TF +
Sbjct: 293 CGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAV 352
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
LSAC+H GLVE+G F M+ Y +EP + HY CM+D+L RAG +EAE+ + MPM+P
Sbjct: 353 LSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKP 412
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
+ +WGALLG C++H N E+ E+ + LI+L P + +YV L ++YA+ ++++V+ R
Sbjct: 413 NAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQ 472
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSM--KGSPKVVKEE 538
+MKERG+ K PG + E+DG VH+F++ K P++ + E
Sbjct: 473 MMKERGVVKP-PGYTLFEMDGKVHKFTIGDKTHPEIQQIE 511
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/509 (38%), Positives = 321/509 (63%), Gaps = 18/509 (3%)
Query: 34 AIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS--LSYATNVFSHI 91
+++ C ++ LK IH +I++ + +RL+ FC SG+ + YA+ +FS I
Sbjct: 23 SLETCSDLTHLKIIHAYMIRTHIICDV---FAASRLIAFCVDPSSGTSLIDYASRIFSQI 79
Query: 92 KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRL 151
+ +L+ +N MIR ++ + H Y Q G+ PD LTFPFL+K CTK
Sbjct: 80 QNPNLFIFNAMIRGHSGSKNPDQAFH------FYVQSQRQGLLPDNLTFPFLVKSCTKLH 133
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
+G+ +G ++K G DV+VQNS++ ++ G +A ++F M DVVSW +MI
Sbjct: 134 CISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIR 193
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
G+ + GD++ A LF +M ++N+ +W+++I+G+ Q +A+ELF+ +QS V +
Sbjct: 194 GFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGV----RA 249
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
++ + SV+S+CA+LGA++ G+ H Y+ ++G+ ++++GTALVDMY +CG +++A VF
Sbjct: 250 NETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVF 309
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+++P++DTL+WTA+I+ A++GY + + F M G+ P +TF +LSAC+H GLVE
Sbjct: 310 EDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVE 369
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+G F M+ + VEP + HY CM+D+L RAG EAER + MP++P+ VWGALLG
Sbjct: 370 RGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGA 429
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C++H N E+GE+V + LI L P + +YV L ++YA A ++ V + R +MK +G++K
Sbjct: 430 CRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKP- 488
Query: 512 PGCSSVEVDGVVHEFSMKGS--PKVVKEE 538
PG S +E+DG VH+F++ S P++ K E
Sbjct: 489 PGHSLIELDGRVHKFTIGDSSHPEMDKIE 517
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 328/572 (57%), Gaps = 50/572 (8%)
Query: 20 SPPNKESTKLILRNAID-----ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCA 74
S NK +++L + +D ++ LK++H +++ Q DH+ T + +
Sbjct: 17 STENKFTSQLSQKTILDLLNTKSSTSLHHLKQVHAVALRTGHFQ--DHYVSGTLVKCYAN 74
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS 134
S +L++A VF ++ +++ +NI+I+ C + K + Y +M+
Sbjct: 75 PHFS-NLNFALKVFEYVPNPNVFVFNIIIKG--C----LQNNEPCKAICCYYKMMIAHAR 127
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
P+ T+P L K CT G V+ V+K G+ DV ++++ I ++ + G V AR +
Sbjct: 128 PNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRM 187
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDV-------------------------------AL 223
E N DV+ +NAMI GYL+ G+++ A
Sbjct: 188 LGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEAR 247
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
+LF MK++N SW+++I G+++GG +EALE+F MQ E ++P K ++SVL+AC
Sbjct: 248 ELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQ----REEIRPRKFVLSSVLAAC 303
Query: 284 AYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWT 343
A LGA+D G+W+H Y+ + D V+GTALVDMY KCG ++ A+ VF++M KK+ W
Sbjct: 304 ANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWN 363
Query: 344 AMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV 403
AMI ++G ++A + F +M+ + RPN +T +G+LSACAHSG+V++G F M V
Sbjct: 364 AMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEV 423
Query: 404 YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEK 463
Y +EP + HY C++D+L RAGL EAE ++ SMPMEP VWGALLG C+ HG+VELGE+
Sbjct: 424 YGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGER 483
Query: 464 VAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVV 523
V + L++L+P N Y L ++YA+AGR+DDV R LMKERG+ K G S ++ DGVV
Sbjct: 484 VGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGV-KTSTGISMIDFDGVV 542
Query: 524 HEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
HEF M + + L+L + K +K GF
Sbjct: 543 HEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGF 574
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/535 (38%), Positives = 326/535 (60%), Gaps = 19/535 (3%)
Query: 25 ESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYA 84
++ KL+L ++ C N R+LK IH ++++ S RL+ FC S + L YA
Sbjct: 17 KNPKLVL---LECCSNARDLKIIHAHMLRTHLFFDVFAAS---RLIAFCIDSTTNLLHYA 70
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
V S I+ +L+ YN +IR C +SE + Y + L G+ PD +T PFL+
Sbjct: 71 IRVASQIQNPNLFIYNALIRG--CSTSENPEN----SFHYYIKALRFGLLPDNITHPFLV 124
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
K C + + +G +GQ +K G D +VQNS++ ++ + G + +AR +F M DVV
Sbjct: 125 KACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVV 184
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
SW MI GY R GD A +LF RM +RN+ +W+++I+G+ + +A+E F+ +Q+
Sbjct: 185 SWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQA-- 242
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
E V ++ + V+S+CA+LGA+ G+ H Y+ R+ L ++++GTA+VDMY +CG V
Sbjct: 243 --EGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNV 300
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
E+A VF+++P+KD L WTA+I+ A++GY ++A F EM +G P +TF +L+AC
Sbjct: 301 EKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTAC 360
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+H+G+VE+G F M+ + VEP + HY CM+D+L RAG +AE+ + MP++P+ +
Sbjct: 361 SHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPI 420
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
W ALLG C++H NVE+GE+V + L+++ P YV L ++YA+A ++ DV R +MK+
Sbjct: 421 WRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKD 480
Query: 505 RGIRKEVPGCSSVEVDGVVHEFSM--KGSPKVVKEELVLILNGLSKIMKNGGFGQ 557
+G+RK PG S +E+DG VHEF++ K P++ K E + L KI G G
Sbjct: 481 KGVRKP-PGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGN 534
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/538 (37%), Positives = 333/538 (61%), Gaps = 29/538 (5%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV--SGSLSYATNVFSHIK 92
I+ C+ +R+L +IH IKS ++ + I R FCA S L YA +F+ +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILR---FCATSDLHHRDLDYAHKIFNQMP 86
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRL 151
+ + +++N +IR SE+++ + + L+ +M+ + P+ TFP +LK C K
Sbjct: 87 QRNCFSWNTIIRG----FSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE---------MSNR- 201
G ++G +K+G D FV ++++ +++ CGF+ AR+LF + M++R
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 202 ----DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
++V WN MI GY+R GD A LF +M++R++ SWN++I+G+ G ++A+E+F
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+EM+ + +P+ +T+ SVL A + LG+++ G+W+H Y SG+ D V+G+AL+DM
Sbjct: 263 REMKKGDI----RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG +E+A VF+ +P+++ + W+AMI+ FA++G +A D F +M GVRP+ V +
Sbjct: 319 YSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAY 378
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+ LL+AC+H GLVE+GR F M V +EP + HY CM+D+L R+GL EAE I +MP
Sbjct: 379 INLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP 438
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
++PD +W ALLG C+M GNVE+G++VA L+D+ P + YV L +MYA G + +V +
Sbjct: 439 IKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSE 498
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R MKE+ IRK+ PGCS +++DGV+HEF ++ +E+ +L +S ++ G+
Sbjct: 499 MRLRMKEKDIRKD-PGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/552 (39%), Positives = 329/552 (59%), Gaps = 21/552 (3%)
Query: 7 MVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLI 66
++S+S + PA S S LR +C MRELK+IH +IK+ + S
Sbjct: 5 ILSFSGVTVPAMPSS-GSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTAS-- 61
Query: 67 TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYK 126
R+L FC S S ++YA VF+ I + + +N +IR + + + ++
Sbjct: 62 -RVLAFCCASPS-DMNYAYLVFTRINHKNPFVWNTIIRGF------SRSSFPEMAISIFI 113
Query: 127 QMLCTG--ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMA 184
MLC+ + P LT+P + K + G ++G V+K G+ DD F++N+++ +++
Sbjct: 114 DMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVT 173
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
CG + A +F M DVV+WN+MI+G+ + G +D A +LF M +RN SWNS+I+GF
Sbjct: 174 CGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGF 233
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
V+ GR ++AL++F+EMQ E+ VKPD T+ S+L+ACAYLGA + G+W+H Y+ R+
Sbjct: 234 VRNGRFKDALDMFREMQ----EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRF 289
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
+ + ++ TAL+DMY KCGC+E VF+ PKK W +MI A NG+ + A D F E
Sbjct: 290 ELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSE 349
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
+E G+ P+ V+F+G+L+ACAHSG V + F +M+ Y++EP + HY M+++L AG
Sbjct: 350 LERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAG 409
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
L EAE LI++MP+E D +W +LL C+ GNVE+ ++ A+ L LDP YV L +
Sbjct: 410 LLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSN 469
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGS--PKVVK-EELVL 541
YA G F++ + R LMKER + KEV GCSS+EVD VHEF G PK + L+
Sbjct: 470 AYASYGLFEEAVEQRLLMKERQMEKEV-GCSSIEVDFEVHEFISCGGTHPKSAEIYSLLD 528
Query: 542 ILNGLSKIMKNG 553
ILN +K+G
Sbjct: 529 ILNWDVSTIKSG 540
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/486 (41%), Positives = 308/486 (63%), Gaps = 10/486 (2%)
Query: 75 LSVSGSLSYATNVFSHIKRSDL--YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG 132
+S +SYA +F HI+ L + +NI+IRA S HS + +Y +M
Sbjct: 1 MSKEAIISYANPIF-HIRHLKLESFVWNIIIRAIVHNVSPPQ-RHSP--ISVYFRMRHHC 56
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+SPD TFPFLL + +G + Q++ FG+ D FV+ S+++++ +CG ++SA
Sbjct: 57 VSPDFHTFPFLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSAL 116
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+FDE ++D+ +WN+++ Y ++G ++ A LF M +RN+ SW+ +I G+V G+ +E
Sbjct: 117 RIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKE 176
Query: 253 ALELFQEMQSSSVEEM-VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
AL+LF+EMQ E+ V P+K T+++VLSAC LGA++ GKWVH Y+ + G++ D+V+G
Sbjct: 177 ALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLG 236
Query: 312 TALVDMYGKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREME-AEG 369
TAL+DMY KCG +ERA VF + KKD A++AMI A+ G E F F EM +
Sbjct: 237 TALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNN 296
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
+ PN VTFVG+L AC H GL+ KG+ F MM + + P + HY CM+D+ R+GL EA
Sbjct: 297 INPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEA 356
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
E I SMPMEPDV +WG+LL G +M G+++ E + LI+LDP+N YV L ++YAK
Sbjct: 357 ESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKT 416
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
GR+ +VK+ R+ M+ +GI+K VPGCS VEV+GVVHEF + + E + +L + +
Sbjct: 417 GRWIEVKRIRHEMEVKGIKK-VPGCSYVEVEGVVHEFVVGDESQQESERIYAMLEEIMQR 475
Query: 550 MKNGGF 555
++ G+
Sbjct: 476 LREAGY 481
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/516 (41%), Positives = 307/516 (59%), Gaps = 18/516 (3%)
Query: 11 SLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL 70
S+ +P ++ P L L N CK +R LK++H QII N L
Sbjct: 53 SMSRTPNPLTNPPSNPQILSLFNP---CKTLRHLKQVHAQIIT----HHNSPFQLSALAS 105
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
L+YA +F H++ YN +IRA SS+T + L LY ML
Sbjct: 106 LSALSPFPTFLAYAKTIFHHLQNPPPSLYNSLIRA--LSSSKT----PLEALPLYHTMLQ 159
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
+G+ PD +T+PF++K C + G V+ VVK G D ++ +S+I L+ + +
Sbjct: 160 SGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGA 219
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
A+ LF+ S RDVVSWNAMI GY++ ++ A +F RM R++ SWN++I G+ G+
Sbjct: 220 AKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKP 279
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
EAL LF +M++ V KP + T+ S+LSACA+LGA+D G +H Y+ + ++ + ++
Sbjct: 280 NEALALFDQMRAVGV----KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIV 335
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
GTALVDMY KCG + A VF M KD LAW +I+ A++G KEA F+EM+ GV
Sbjct: 336 GTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGV 395
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
PN +TFV +LSAC+H+G+V++G+ M Y +EP V HY C+ID+L+RAG EA
Sbjct: 396 EPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAM 455
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
LI +MPMEP+ GALLGGC++HGN ELGE V + LI+L P + Y+ L ++YA A
Sbjct: 456 ELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAK 515
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++DD +K RNLMK GI K VPG S +E+ G+VH F
Sbjct: 516 KWDDARKVRNLMKVNGISK-VPGVSVIELKGMVHRF 550
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/499 (41%), Positives = 316/499 (63%), Gaps = 19/499 (3%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS-VSGSLSYATNVFSHI 91
+ +D+CK++ EL++IH Q+IK+ L +H ++RL+ FC+LS VSG L YA++VFS I
Sbjct: 11 SVLDKCKSLCELRQIHAQMIKTNLL---NHQFTVSRLIAFCSLSGVSGGLDYASSVFSRI 67
Query: 92 KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDC-LTFPFLLKECTK 149
+ + + + +I+ S +N S L LY +ML C S + P +LK C K
Sbjct: 68 QHPNSFIFFALIKGF---SDTSNPVES---LILYARMLSCLNYSSGVEFSIPSVLKACGK 121
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
L G V+GQV+K + D FV NS++ +++ G + AR +FD M NRDVVSWN+M
Sbjct: 122 LLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSM 181
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I GYL++G++++A +F M +++ +W S+I+ +VQ +AL+LF+EM S +
Sbjct: 182 IAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGL---- 237
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV-VIGTALVDMYGKCGCVERAY 328
+PD I SVLSA A LG ++ GKW+H Y+ + ++ IG+AL+DMY KCG +E AY
Sbjct: 238 RPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAY 297
Query: 329 GVFKEMPKKDTLA-WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF+ + + + W +MIS A++G +EA D F EME + PN +TF+GLLS C+H
Sbjct: 298 HVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHG 357
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GLVE+G++ F M Y + P + HY CMID+ RAG +A +I++MP E D+ W A
Sbjct: 358 GLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKA 417
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+L HG++E+G+ A I+L P + + YV L ++YAKAGR+DDV K R +M++RG+
Sbjct: 418 ILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGV 477
Query: 508 RKEVPGCSSVEVDGVVHEF 526
+K + GCSS+ V+G VHEF
Sbjct: 478 KK-IAGCSSMLVNGKVHEF 495
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/460 (42%), Positives = 295/460 (64%), Gaps = 8/460 (1%)
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+ +N +IRA+ S + L LY +M + PD TFPFLL+ G
Sbjct: 25 FVWNNLIRAST--RSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQSINTPHRG--- 79
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++ Q++ G+ +D FVQ S+I+++ +CG T AR FDE++ D+ SWNA+I ++
Sbjct: 80 RQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKA 139
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G + +A LF +M ++N+ SW+ +I G+V G + AL LF+ +Q+ ++ +P++ T+
Sbjct: 140 GMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQL-RPNEFTM 198
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM-P 335
+SVLSACA LGA+ HGKWVH Y+ ++G+ DVV+GT+L+DMY KCG +ERA +F + P
Sbjct: 199 SSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGP 258
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+KD +AW+AMI+ F+++G +E + F M +GVRPN VTFV +L AC H GLV +G
Sbjct: 259 EKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNE 318
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M + Y V P + HY CM+D+ SRAG +A +++SMPMEPDV +WGALL G ++H
Sbjct: 319 YFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIH 378
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
G+VE E L++LDP N + YV L ++YAK GR+ +V+ R+LM+ RGI+K +PGCS
Sbjct: 379 GDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKK-LPGCS 437
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
VEVDGV+ EF + L ++L+ + K ++ G+
Sbjct: 438 LVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGY 477
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/534 (37%), Positives = 331/534 (61%), Gaps = 18/534 (3%)
Query: 15 SPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCA 74
SPA +S + T L + + C M++LK+IH+Q+IK+ + + S R+L FCA
Sbjct: 11 SPATISKLISDQTYLSMLD--KNCTTMKDLKKIHSQLIKTGLAKDTNAAS---RILAFCA 65
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-I 133
S +G ++YA VF I+ +++ +N +IR + S N + LY ML T +
Sbjct: 66 -SPAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNS------ISLYIDMLLTSPV 118
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
P LT+P + K + GA ++G+++K G+ +D F++N+++ +++ CGF + AR
Sbjct: 119 QPQRLTYPSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARK 178
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
+FD + D+V+WN MI+G + G +D + LF +M RN SWNS+I+G+V+ GR +A
Sbjct: 179 VFDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDA 238
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
LELFQ+MQ E ++P + T+ S+L+ACA LGAI G+W+H Y+ + + + ++ TA
Sbjct: 239 LELFQKMQV----ERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTA 294
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
++DMY KCG +++A VF+ P++ W +MI A+NG EA F +++ +RP+
Sbjct: 295 IIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPD 354
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
V+F+ +L+AC H+G+V+K + F++MR Y ++P + H++CM+D+L RAGL EAE LI
Sbjct: 355 DVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELI 414
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
RSM ++PD +WG+LL C +GN+++ ++ A +LI+L+P + +V + + YA A F+
Sbjct: 415 RSMHVDPDAIIWGSLLWSCCKYGNIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFE 474
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
+ K R +KE I KE PGCS +EV G VHEF G +E+ +L+ L+
Sbjct: 475 EALKERLTLKENHIGKE-PGCSCIEVGGEVHEFVAGGRAHPEIKEIYRVLDVLT 527
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/534 (38%), Positives = 319/534 (59%), Gaps = 16/534 (2%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PN + +++ A E ++ + IH ++K+ +D + + F+ +L G L
Sbjct: 129 PNSYTFPFVIKAAT-EVSSLLAGQAIHGMVMKASF--GSDLFISNSLIHFYSSL---GDL 182
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A VFS I D+ ++N MI S + L+L+K+M P+ +T
Sbjct: 183 DSAYLVFSKIVEKDIVSWNSMI------SGFVQGGSPEEALQLFKRMKMENARPNRVTMV 236
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
+L C KR+D G + + G+ ++ + N+++ +++ CG + AR LFD+M +
Sbjct: 237 GVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEK 296
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
D+VSW MI GY + GD D A +F M + +I +WN++I+ + Q G+ +EAL +F+E+Q
Sbjct: 297 DIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQ 356
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
+ + KP+++T+AS L+ACA LGA+D G W+H Y+++ G+ + I T+L+DMY KC
Sbjct: 357 ---LNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKC 413
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G +E+A VF + ++D W+AMI+ A++G+G+ A D F +M+ V+PN VTF LL
Sbjct: 414 GHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLL 473
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
AC+HSGLV++GR F MR VY V P HYACM+DIL RAG EA LI MP+ P
Sbjct: 474 CACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPS 533
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
VWGALLG C+++GNVEL E L++ D NH YV L ++YAKAG++D V + R
Sbjct: 534 ASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQH 593
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
MK G+ KE PGCSS+EV+G++HEF + + + E+ L+ + +K+ G+
Sbjct: 594 MKVSGLEKE-PGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGY 646
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 166/552 (30%), Positives = 269/552 (48%), Gaps = 103/552 (18%)
Query: 7 MVSYSLLNSPAKVSPPNKE----STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH 62
+ S + ++P ++ N++ ST IL ID+C N + LK++H ++++ D
Sbjct: 8 LASVPISSNPTILTANNEQKSNPSTVPIL---IDKCANKKHLKQLHAHMLRTGLFF--DP 62
Query: 63 HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
S T+L CALS SL YA VF I R +LYT+N +IRA A + L
Sbjct: 63 PS-ATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPI------QGL 115
Query: 123 KLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
++ QML P+ TFPF++K T+ L G +++G V+K D+F+ NS+I
Sbjct: 116 LVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHF 175
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ + G + SA ++F ++ +D+VSWN+MI G+++ G + AL LF+RMK N
Sbjct: 176 YSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMEN-------- 227
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
+P+++T+ VLSACA ++ G+W Y+ R
Sbjct: 228 ---------------------------ARPNRVTMVGVLSACAKRIDLEFGRWACDYIER 260
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERA---------------------YG----------V 330
+G+D ++++ A++DMY KCG +E A Y V
Sbjct: 261 NGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRV 320
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME-AEGVRPNHVTFVGLLSACAHSGL 389
F MP++D AW A+IS + NG KEA FRE++ + +PN VT L+ACA G
Sbjct: 321 FDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGA 380
Query: 390 VEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
++ G W HVY+ ++ + + +ID+ S+ G +A + S+ DVFVW
Sbjct: 381 MDLGGWI-----HVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERR-DVFVW 434
Query: 446 GALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
A++ G MHG+ ++L K+ + + P N + NL + +G D+ + N
Sbjct: 435 SAMIAGLAMHGHGRAAIDLFSKMQE--TKVKP-NAVTFTNLLCACSHSGLVDEGRLFFNQ 491
Query: 502 MKERGIRKEVPG 513
M R + VPG
Sbjct: 492 M--RPVYGVVPG 501
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 322/534 (60%), Gaps = 14/534 (2%)
Query: 23 NKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS 82
++++ L+LR A +MR+L EI QII SP + + I + F S G+L
Sbjct: 21 HRKTIHLLLRCATQ--LSMRQLFEIQAQIIASPIPSIDPN---IIAVKFIGVSSSHGNLR 75
Query: 83 YATNVFSH-IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
++ +F+H + +++ YN +++A S+ N H+ + +L +PD TF
Sbjct: 76 HSVLIFNHFLSFPNIFAYNALLKA----FSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
+LK C L G V+ V K+G ++FV+NS++ L+ G A+ LFDEM R
Sbjct: 132 SVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR 191
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
DVVSWN +I GY SG +D A +F M ++N+ SW+++I+G+ + + +A+ELF++MQ
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQ 251
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
E + P+ +T+ SVLSACA+LGA+D GKW+H ++RR+ ++ + +G AL DMY KC
Sbjct: 252 H---EGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKC 308
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
GCV A GVF EM ++D ++W+ +I A+ GY EAF+ F EM +G+ PN ++F+GLL
Sbjct: 309 GCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLL 368
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
+AC H+GLV+KG F MM VY + P + HY C++D+LSRAG +AE LI SMPM+P+
Sbjct: 369 TACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPN 428
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
V VWGALLGGC+++ + E GE+V +++LD + V L ++YA GR DD R
Sbjct: 429 VIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLR 488
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
M++ K PGCS +E++ V+EF M S + ++ L MK G+
Sbjct: 489 MRDNKSMK-TPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGY 541
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/528 (40%), Positives = 312/528 (59%), Gaps = 20/528 (3%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
LR C MRELK+IH +IK+ + S R+L FC S S +YA VF+
Sbjct: 28 LRLIDTRCSTMRELKQIHANLIKTGLISDTVAAS---RVLAFCCASPSDR-NYAYLVFTR 83
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG--ISPDCLTFPFLLKECT 148
I + + +N +IR + + + ++ MLC+ + P LT+P + K
Sbjct: 84 INHKNPFVWNTIIRGF------SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYA 137
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
G ++G+V+K G+ DD F++N+++ +++ CG + A LF M DVV+WN+
Sbjct: 138 SLGLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNS 197
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+I+G + G +D A LF M +RN SWNS+I+GFV+ GR ++ALE+F+EMQ E
Sbjct: 198 IIMGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQ----ERD 253
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
VKPD T+ S+L+ACAYLGA + G+W+H Y+ R+ + + ++ TAL+DMY KCGC E
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGL 313
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF+ P K W +MI A NG + A D F E+E G+ P+ V+F+G+L+ACAHSG
Sbjct: 314 KVFECAPTKQLSCWNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSG 373
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
V K F +MR Y++EP + HY CM+++L AGL EAE LI+ MP+E D +W +L
Sbjct: 374 EVHKAGEFFRLMREKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSL 433
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
L C+ +GNVE+ ++ A L +LDP YV + + YA G F++ + R LMKER +
Sbjct: 434 LAACRKNGNVEMAKRAANCLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQME 493
Query: 509 KEVPGCSSVEVDGVVHEFSMKGS--PKVVK-EELVLILNGLSKIMKNG 553
KEV GCSS+EVD VHEF G PK + L+ ILN +K+G
Sbjct: 494 KEV-GCSSIEVDFEVHEFVSCGKKHPKSTEIYSLLGILNWDVSTIKSG 540
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/549 (38%), Positives = 327/549 (59%), Gaps = 28/549 (5%)
Query: 9 SYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHS--LI 66
S SLL+ VSP + + +L N ELK++H ++K TN S +
Sbjct: 4 SLSLLH----VSPLHHRPSTHLLHNFTSPF----ELKQLHAHLLK-----TNSPLSSLPL 50
Query: 67 TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYK 126
+R+ CA + S SYA +F + S++ +N +R+ A S + + L+
Sbjct: 51 SRVASVCAFN--SSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPAD------AISLFY 102
Query: 127 QMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
++ ISPD T F+LK C++ LD G V+G V K G+ ++F+QN ++ L+ CG
Sbjct: 103 RLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCG 162
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
+ AR +FD+M RDV++WN MI ++ GD + A LF M +RN+ SW S+I G+ Q
Sbjct: 163 EIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQ 222
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G+++EA++LF EM+ + + P+++T+ +VL ACA +G + G+ +H + RSG +
Sbjct: 223 CGKSKEAIDLFLEMEDAGL----LPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEK 278
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
++ + L+DMY KCGC+E A +F M ++ ++W+AMI+ A +G ++A F +M
Sbjct: 279 NIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMI 338
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
GV+PN VTF+G+L AC+H G+VEKGR F M Y + P + HY CM+D+ SRAGL
Sbjct: 339 NTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLL 398
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
EA I +MP+ P+ VWGALLGGC++H N++L E+ ++L LDPLN +YV L ++Y
Sbjct: 399 QEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIY 458
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
A+AGR++DV + R LM++RG++K PG SS+ V+GVV+ F EE+ L
Sbjct: 459 AEAGRWEDVARVRKLMRDRGVKK-TPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKL 517
Query: 547 SKIMKNGGF 555
+ MK G+
Sbjct: 518 LQRMKLKGY 526
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/480 (41%), Positives = 306/480 (63%), Gaps = 10/480 (2%)
Query: 81 LSYATNVFSHIKRSDL--YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
++YA +F HI+ L + +NI+IRA + + HS + +Y +M +SPD
Sbjct: 8 IAYANPIF-HIRHLKLESFLWNIIIRA-IVHNVSSPQRHSP--ISVYLRMRNHRVSPDFH 63
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TFPFLL L +G + Q++ FG+ D FV+ S+++++ +CG + SA+ +FD+
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
++D+ +WN+++ Y ++G +D A LF M +RN+ SW+ +I G+V G+ +EAL+LF+
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFR 183
Query: 259 EMQ-SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
EMQ E V+P++ T+++VLSAC LGA++ GKWVH Y+ + ++ D+V+GTAL+DM
Sbjct: 184 EMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDM 243
Query: 318 YGKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREME-AEGVRPNHV 375
Y KCG +ERA VF + KKD A++AMI A+ G E F F EM ++ + PN V
Sbjct: 244 YAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSV 303
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
TFVG+L AC H GL+ +G+ F MM + + P + HY CM+D+ R+GL EAE I S
Sbjct: 304 TFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIAS 363
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MPMEPDV +WG+LL G +M G+++ E + LI+LDP+N YV L ++YAK GR+ +V
Sbjct: 364 MPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEV 423
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K R+ M+ +GI K VPGCS VEV+GVVHEF + + E + +L+ + + ++ G+
Sbjct: 424 KCIRHEMEVKGINK-VPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGY 482
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/495 (40%), Positives = 303/495 (61%), Gaps = 17/495 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCA-LSVSGSLSYATNVFSHIKR 93
++C++M +L++ H+QII+ L + H+ LI L+ FCA S S +L+YA +F I +
Sbjct: 29 FEKCQSMSQLRQYHSQIIR---LGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQ 85
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
D + YN +I+ S+ T+S L LY ML + P+ TFP LL C K G
Sbjct: 86 PDAFLYNTIIKGFL--HSQLLPTNS--ILLLYSHMLQNSVLPNNFTFPSLLIACRKIQHG 141
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
+ ++ + KFG NS+I +++ + AR +F + + D VSW ++I GY
Sbjct: 142 M---QIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGY 198
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
+ G +D A +F+ M ++N SWN+++ +VQ R EA LF M++ + + DK
Sbjct: 199 SKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVL---DK 255
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
++LSAC LGA+D GKW+H Y++R+G++ D + TA+VDMY KCGC+E+A VF
Sbjct: 256 FVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHS 315
Query: 334 MPK--KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+P + +W MI A++G G+ A F+EME + V P+ +TF+ LL+ACAHSGLVE
Sbjct: 316 LPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVE 375
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+GR F M VY +EP + H+ CM+D+L RAG+ EA +LI MP+ PDV V G LLG
Sbjct: 376 EGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGA 435
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C+ H N+ELGE++ + +I+L+P N YV L ++YA AG+++D K R LM +RG++K
Sbjct: 436 CKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKK-A 494
Query: 512 PGCSSVEVDGVVHEF 526
PG S +E+ G VHEF
Sbjct: 495 PGFSMIELQGTVHEF 509
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/526 (38%), Positives = 319/526 (60%), Gaps = 14/526 (2%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLIT-RLLFFCALSVSGSLSYATNVFSHIKR 93
I CK R LK+IH IK+ + HH L LL F LS + YA FS I
Sbjct: 22 ISRCKTTRHLKQIHAHFIKTGQI----HHPLAAAELLKFLTLSTQREIKYARKFFSQIHH 77
Query: 94 SDLYTYNIMIRANACKSSET-NDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRL 151
+ +++N +IRA A + +S + L + ML G + P+ TFP +LK C K
Sbjct: 78 PNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLA 137
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS-NRDVVSWNAMI 210
G ++G VVK G+ D FV+++++ +++ CG + A +LF + +VV WN MI
Sbjct: 138 RIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMI 197
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY+R GDL + +LF M +++ SWN +I+G Q G +EA+E+F +MQ V
Sbjct: 198 DGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDV----P 253
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
P+ +T+ SVL A + LGAI+ GKWVH + ++ ++ D V+G+AL+DMY KCG +++A V
Sbjct: 254 PNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQV 313
Query: 331 FKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
F+ + KK+ + W+A+I A++G ++A D F M+ GV P+ V ++G+LSAC+H+GL
Sbjct: 314 FEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGL 373
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
VE+GR + M ++ + P + HY CM+D+L RAG EAE+LI +MP++PD + ALL
Sbjct: 374 VEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALL 433
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G C+MHGN+E+GE++A+ L+ P + YV L +M+A G ++ V K R MKE IRK
Sbjct: 434 GACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRK 493
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ PGCS +E+DGV+HEF ++ E + +L +S +++ G+
Sbjct: 494 D-PGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGY 538
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/539 (40%), Positives = 302/539 (56%), Gaps = 69/539 (12%)
Query: 12 LLNSPAKVSPPNKESTKLILRN-----------AIDECKNMRELKEIHTQIIKSPCLQTN 60
L++ P S P + L N ID+C ++LK+IH Q++++
Sbjct: 8 LVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLF--F 65
Query: 61 DHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
D S +RL+ ALS SL YA VF I +LYT+N +IRA A S+ +
Sbjct: 66 DPFS-ASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSN------PHQ 118
Query: 121 CLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
L ++ +ML PD TFPFL+K ++ + G + +G V+K + DVF+ NS+I
Sbjct: 119 SLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLI 178
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
+ C G+L + +F +R++ SWNS
Sbjct: 179 HFYAKC-------------------------------GELGLGYRVFVNXPRRDVVSWNS 207
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+IT FVQGG EALELFQEM++ +V KP+ IT+ VLSACA + G+WVH Y+
Sbjct: 208 MITAFVQGGCPEEALELFQEMETQNV----KPNGITMVGVLSACAKKSDFEFGRWVHSYI 263
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA--------- 350
R+ + + + A++DMY KCG VE A +F +MP+KD ++WT M+ +A
Sbjct: 264 ERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQ 323
Query: 351 ---LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
++G+GK+A F +M+ + V+PN VTF +L AC+H GLVE+GR F M VY V
Sbjct: 324 GLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVL 383
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY 467
P V HYACM+DIL RAGL EA LI MPM P VWGALLG C +H NV L E+
Sbjct: 384 PGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQ 443
Query: 468 LIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
LI+L+P NH YV L ++YAKAG++D V R LM++ G++KE PGCSS+EVDG+VHEF
Sbjct: 444 LIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKE-PGCSSIEVDGIVHEF 501
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/518 (38%), Positives = 307/518 (59%), Gaps = 21/518 (4%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
LRN C + ELK+IH I+K Q+N L+T++L C + YAT +F
Sbjct: 14 LRN----CPKIAELKKIHAHIVKLSLSQSN---FLVTKMLDLC--DNLSHVDYATMIFQQ 64
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT-GISPDCLTFPFLLKECTK 149
++ ++++YN +IR + T++ + ++ QML T SPD TFPF++K C
Sbjct: 65 LENPNVFSYNAIIR------TYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAG 118
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
L +G V+ V KFG +N++I ++ CG ++ A +++EM+ RD VSWN++
Sbjct: 119 LLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSL 178
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I G++R G + A ++F M R I SW ++I G+ +GG +AL +F+EMQ +E
Sbjct: 179 ISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIE--- 235
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
PD+I++ SVL ACA LGA++ GKW+H Y +SG + + ALV+MY KCGC++ A+G
Sbjct: 236 -PDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWG 294
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
+F +M +KD ++W+ MI A +G G A F +M+ GV PN VTFVG+LSACAH+GL
Sbjct: 295 LFNQMIEKDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGL 354
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
+G F +MR Y +EP + HY C++D+L R+G +A I MPM+PD W +LL
Sbjct: 355 WNEGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLL 414
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C++H N+E+ + L+ L+P YV L ++YAK +++ V R L++ + I+K
Sbjct: 415 SSCRIHHNLEIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKK 474
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
PGCS +EV+ +V EF K +E+ IL GL+
Sbjct: 475 -TPGCSLIEVNNLVQEFVSGDDSKPFSQEVFWILKGLT 511
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/565 (37%), Positives = 321/565 (56%), Gaps = 45/565 (7%)
Query: 23 NKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS 82
++++ L+LR A +MR+L EI QII SP + + I + F S G+L
Sbjct: 21 HRKTIHLLLRCATQ--LSMRQLFEIQAQIIASPIPSIDPN---IIAVKFIGVSSSHGNLR 75
Query: 83 YATNVFSH-IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
++ +F+H + +++ YN +++A S+ N H+ + +L +PD TF
Sbjct: 76 HSVLIFNHFLSFPNIFAYNALLKA----FSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
+LK C L G V+ V K+G ++FV+NS++ L+ G A+ LFDEM R
Sbjct: 132 SVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR 191
Query: 202 DVVSWNA-------------------------------MIIGYLRSGDLDVALDLFRRMK 230
DVVSWN MI GY R G+L+ A LF M
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMP 251
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
RN+ SWN++I G+ Q + +A+ELF++MQ E + P+ +T+ SVLSACA+LGA+D
Sbjct: 252 MRNVVSWNAMIAGYAQNEKYADAIELFRQMQH---EGGLAPNDVTLVSVLSACAHLGALD 308
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
GKW+H ++RR+ ++ + +G AL DMY KCGCV A GVF EM ++D ++W+ +I A
Sbjct: 309 LGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLA 368
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
+ GY EAF+ F EM +G+ PN ++F+GLL+AC H+GLV+KG F MM VY + P +
Sbjct: 369 MYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKI 428
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY C++D+LSRAG +AE LI SMPM+P+V VWGALLGGC+++ + E GE+V +++
Sbjct: 429 EHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILE 488
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
LD + V L ++YA GR DD R M++ K PGCS +E++ V+EF M
Sbjct: 489 LDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMK-TPGCSWIEINNSVYEFFMGD 547
Query: 531 SPKVVKEELVLILNGLSKIMKNGGF 555
S + ++ L MK G+
Sbjct: 548 SSHPQSLRIYSMIRELKWKMKVAGY 572
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 153/367 (41%), Gaps = 78/367 (21%)
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD---EMSNRDVVSWNAMIIGYL----- 214
V+ V D + I L + C S R LF+ ++ + S + II
Sbjct: 10 VITLAVLHD-YNHRKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVS 68
Query: 215 -RSGDLDVALDLFRR-MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
G+L ++ +F + NIF++N+++ F Q + F + PD
Sbjct: 69 SSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFN--NQLVLPNAPNPD 126
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC--------- 323
+ T SVL ACA L + G+ VH ++ + G + ++ + +LVD+Y K GC
Sbjct: 127 EYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFD 186
Query: 324 ----------------------VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA--- 358
V++A VF M +K+ ++W+ MIS +A G +EA
Sbjct: 187 EMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQL 246
Query: 359 ----------------------------FDTFREMEAE-GVRPNHVTFVGLLSACAHSGL 389
+ FR+M+ E G+ PN VT V +LSACAH G
Sbjct: 247 FENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGA 306
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
++ G+W +R +E ++ + D+ ++ G EA+ + M E DV W ++
Sbjct: 307 LDLGKWIHRFIRRNK-IEVGLFLGNALADMYAKCGCVLEAKGVFHEM-HERDVISWSIII 364
Query: 450 GGCQMHG 456
G M+G
Sbjct: 365 MGLAMYG 371
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/517 (38%), Positives = 320/517 (61%), Gaps = 20/517 (3%)
Query: 36 DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSD 95
+ C + +I+ IIK+ L N S TR L FCA S SG+++YA +F + +
Sbjct: 36 NHCTTINHFHQIYPHIIKTG-LTLNPIAS--TRALTFCA-SPSGNINYAYKLFVRMPNPN 91
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
LY++N +IRA + S+ + L+ ML + I P LT+P + K +
Sbjct: 92 LYSWNTIIRAFSRSSTPQ------FAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHY 145
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD----EMSNRDVVSWNAMII 211
GA ++G+VVK G+ +D F+ N++I ++ G ++ AR +FD E+ + DVV+ N+MI+
Sbjct: 146 GAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIM 205
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
GY + G++D + +LF M R SWNS+I+G+V+ G+ EALELF +MQ E
Sbjct: 206 GYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFE----V 261
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
+ T+ S+L+ACA+LGA+ HGKWVH Y++R+ + +V++ TA++DMY KCG VE A VF
Sbjct: 262 SEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVF 321
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV-RPNHVTFVGLLSACAHSGLV 390
+ P++ W ++I A+NG+ +EAF+ F ++E+ + +P+ V+F+G+L+AC H G +
Sbjct: 322 ETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAI 381
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
K R F +M + Y +EP + HY C++D+L +AGL EAE LI+ MP++PD +WG+LL
Sbjct: 382 NKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLS 441
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
C+ H NV++ + AQ + +L+P + + YV + +++A + +F++ + R LMKE KE
Sbjct: 442 SCRKHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKE 501
Query: 511 VPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
PGCSS+E+ G VHEF G +E+ +LN S
Sbjct: 502 -PGCSSIELYGEVHEFIAGGRLHPKTQEIYHLLNDSS 537
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/473 (40%), Positives = 290/473 (61%), Gaps = 11/473 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A +F DL ++N MI + + + L Y++M GI PD +
Sbjct: 156 GDLDGARKMFDKSCVRDLVSWNSMINGYVRRG------WAYEALNFYREMKVEGIKPDEV 209
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T ++ C + D +G + + + G+ V + N+++ ++M CG + SAR LFD M
Sbjct: 210 TMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSM 269
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+N+ +VSW M++GY +SG LD+A LF M +++ WN++I G+V R +EAL LF
Sbjct: 270 TNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFN 329
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ+ ++ PD++T+ S LSAC+ LGA+D G W+H Y+ + L +V +GTAL+DMY
Sbjct: 330 EMQAMNI----NPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMY 385
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + +A VF+E+P +++L WTA+IS AL+G A F EM V P+ VTF+
Sbjct: 386 AKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFL 445
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
GLLSAC H GLVE+GR F M + + P + HY+CM+D+L RAGL EAE LI+SMP+
Sbjct: 446 GLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPI 505
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
E D VWGAL C++HGNV +GE+ A L+ +DP + YV L +MY +A + + K
Sbjct: 506 EADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKA 565
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
R LM++RG+ K PGCSS+EV+G+V+EF ++ E++ L L++ ++
Sbjct: 566 RKLMRQRGVEK-TPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLE 617
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 227/460 (49%), Gaps = 88/460 (19%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+++CK++ +LK+I +Q++ + ++ S RL+ FCA+S L Y TN+ + +
Sbjct: 13 LEKCKSISQLKQIQSQMVLTGLIEDGFASS---RLIAFCAISEWRDLDYCTNILFNTRNP 69
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLTFPFLLKECTKRLDG 153
+ +++N+ IR + + + + LYK++L C G PD T+P L K C +
Sbjct: 70 NTFSWNVAIRGF------LDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLI 123
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
+G+ + G V+ G D+FV N+VI L ++CG + AR +FD+ RD+VSWN+MI GY
Sbjct: 124 RMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGY 183
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
+R G W A EAL ++EM+ E +KPD+
Sbjct: 184 VRRG-------------------W------------AYEALNFYREMKV----EGIKPDE 208
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER------- 326
+T+ V+S+CA L +D G+ H Y+ +GL V + AL+DMY KCG +E
Sbjct: 209 VTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDS 268
Query: 327 ------------------------AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
A+ +F EMP KD + W AMI + GKEA F
Sbjct: 269 MTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALF 328
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH-----VYHYACMI 417
EM+A + P+ VT V LSAC+ G ++ G W H Y +E H V +I
Sbjct: 329 NEMQAMNINPDEVTMVSCLSACSQLGALDVGIWI-----HHY-IEKHELSLNVALGTALI 382
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
D+ ++ G ++A ++ + +P + W A++ G +HGN
Sbjct: 383 DMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGN 421
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/514 (39%), Positives = 299/514 (58%), Gaps = 16/514 (3%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M++LK+I Q+IK+ + L T+ L C G L YA VF+ I + + +N
Sbjct: 1 MKQLKQIQAQMIKTAIIT---EPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+IRA +N Y+QML + + + TFPFLL+ C L V+
Sbjct: 58 AIIRAY------SNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVH 111
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G V+K G DVF N+++ ++ CG + AR LFD + RD VSWN MI GY++SGD+
Sbjct: 112 GLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVK 171
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A +F M +N+ SW S+I+G V+ G++ EAL L EMQ++ E D + IAS+L
Sbjct: 172 TAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFE----LDGVAIASLL 227
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP--KKD 338
+ACA LGA+D G+W+H Y+ +G+D D VIG ALV+MY KCG +E A VF ++ +KD
Sbjct: 228 TACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKD 287
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
WTAMI FA++G G EA + F M EG+RPN +TF +L AC++ GLVE+G+ F
Sbjct: 288 VYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFK 347
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
M+ Y V P + HY CM+D+L R+G EA+ LI+ MPM+P +WGALL C +H +
Sbjct: 348 SMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDF 407
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
LG +V +L+++D + Y+ L + A G++ + + R MK G+ PG SSV
Sbjct: 408 LLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPIS-PGKSSVT 466
Query: 519 VDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
++G+VHEF E++ L L +++ ++
Sbjct: 467 LNGIVHEFLAGHQDHPQMEQIQLKLKQIAERLRQ 500
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/451 (42%), Positives = 278/451 (61%), Gaps = 6/451 (1%)
Query: 106 NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRL-DGLVGASVYGQVV 164
NA S G+ + M G +P +T+ +L C K D L+G V+G+VV
Sbjct: 113 NALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVV 172
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
GV D+ V+N+++ ++ C + SA LFD M R VVSW +++ G R G +D A D
Sbjct: 173 GSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARD 232
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
LF RM +R+ SW ++I G+VQ R REALE+F+EMQ S+V D+ T+ SV++ACA
Sbjct: 233 LFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNV----SADEFTMVSVITACA 288
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
LGA++ G+WV Y+ R G+ D +G AL+DMY KCG +ERA VFK+M +D WTA
Sbjct: 289 QLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTA 348
Query: 345 MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
+I A+NGYG+EA + F M P+ VTF+G+L+AC H+GLV+KGR F+ MR Y
Sbjct: 349 IILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETY 408
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
+ P+V HY C+ID+ RAG +EA I MPM P+ +WG LL C++HGN E+GE V
Sbjct: 409 NIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELV 468
Query: 465 AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
+ L+ +DP N Y L ++YAK R++DV++ R+ + E+GI+KE PGCS +E++G++H
Sbjct: 469 TERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKE-PGCSLIEMNGIIH 527
Query: 525 EFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
EF + +E+ L + + N G+
Sbjct: 528 EFVAGDQSHPMSKEIYCKLESIINDLNNVGY 558
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 154/364 (42%), Gaps = 69/364 (18%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMA 184
Y +ML G PD TFP LLK + +V+ VVKFG+ + V S+++ + A
Sbjct: 31 YARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAA 90
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
G +AR L E V WNA+I G+ R RR + F
Sbjct: 91 GGDGAAARALLSERERDTPVVWNALISGHNRC----------RR--------FGEACCSF 132
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY-LGAIDHGKWVHGYLRRSG 303
V RA A P +T SVLSAC G + G VHG + SG
Sbjct: 133 VDMARAGAA-----------------PTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSG 175
Query: 304 LDCDVVIGTALVDMYGKC-------------------------------GCVERAYGVFK 332
+ D+ + ALVDMY +C G V+ A +F
Sbjct: 176 VLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFG 235
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
MP++DT++WTAMI + +EA + FREM+ V + T V +++ACA G +E
Sbjct: 236 RMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEM 295
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G W V M ++ + +ID+ S+ G A + + M D F W A++ G
Sbjct: 296 GEWVRVYMSR-QGIKMDAFVGNALIDMYSKCGSIERALDVFKDM-HHRDKFTWTAIILGL 353
Query: 453 QMHG 456
++G
Sbjct: 354 AVNG 357
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/538 (36%), Positives = 322/538 (59%), Gaps = 19/538 (3%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
P N +L +++ CK+M ++K+ H +I + + H +LL S GS
Sbjct: 11 PLNSNQLQLF---SLESCKSMNQIKQTHAHLITTGLIL---HPITANKLLKVLIASSFGS 64
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLT 139
LSYA +F I + D++ YN MI+A+A + ++++ ++++ M+ +G P+ T
Sbjct: 65 LSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNS-----MRIFLSMVRVSGFLPNRYT 119
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
F F+ K C L L G + +K G+ ++FV N++I ++ G V AR +FD
Sbjct: 120 FVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSL 179
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
++D+ SWN MI GY+ SG++ A ++F M +R++ SW +II G+VQ G +EAL+LF E
Sbjct: 180 DQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHE 239
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M ++ P++ T+AS L+ACA L A+D G+W+H Y+ +S + + + +L+DMY
Sbjct: 240 M----LQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYA 295
Query: 320 KCGCVERAYGVFKEMP--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
KCG ++ A VF + K W AMI +A++G KEA D F +M+ E V PN VTF
Sbjct: 296 KCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTF 355
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V LL+AC+H LVE+GR F M Y +EP + HY CM+D+L R+GL EAE + +MP
Sbjct: 356 VALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMP 415
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M PD +WGALLG C++H ++E G+++ + + +LD + +V L ++Y+ +G++D+ K
Sbjct: 416 MAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKA 475
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R ++ G RK+ PGCSS+E++GV H+F + ++L L L+ ++ +KN G+
Sbjct: 476 VRQKIEVSG-RKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGY 532
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/540 (38%), Positives = 314/540 (58%), Gaps = 25/540 (4%)
Query: 18 KVSPPNKESTKLILRNAI----DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFC 73
++PP + L L N++ + C ++ LK++ +I QT H +LL FC
Sbjct: 44 NMAPPQNQ---LNLNNSVLALLERCIHLNHLKQLQAFLITLGHAQT---HFYAFKLLRFC 97
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGI 133
L++S +LSYA +F H++ ++Y Y MI A A S T+ L LY+ M+
Sbjct: 98 TLALS-NLSYARFIFDHVESPNVYLYTAMITAYASHSDHTS------ALLLYRNMVRRRR 150
Query: 134 S-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMA-CGFVTSA 191
P+ +P +LK CT+ + V+ QV++ G VQ +++ ++ V SA
Sbjct: 151 PWPNHFIYPHVLKSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESA 210
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R+LFDEM+ R+VVSW AMI GY R G + A+ LF M +R++ SWN++I G+ Q G
Sbjct: 211 RLLFDEMTERNVVSWTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFM 270
Query: 252 EALELFQEM---QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
EAL LF+ M ++ + + +P+++T LSAC + G + GKW+HGY+ R+GL D
Sbjct: 271 EALSLFRRMIAVEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDS 330
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME-- 366
+ ALVDMYGKCGC++ A VF ++ +W +MI+ AL+G + A F EM
Sbjct: 331 FVSNALVDMYGKCGCLKEARRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEMMTC 390
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
GV+P+ VTF+GLL+AC H GLVEKG F +M Y +EP + HY C++D+L RAG F
Sbjct: 391 GSGVKPDEVTFIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQF 450
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
EA ++R M +EPD +WG+LL GC++HG+ +L E + LID+DP N + + L ++Y
Sbjct: 451 EEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIY 510
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
+ G++D+V+K R ++KE+ K PGCS +E+D VH+F EE+ L L
Sbjct: 511 GELGKWDEVRKVRKVLKEQNAHK-TPGCSWIEIDNQVHQFYSVDKTHPRTEEIYNTLESL 569
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/530 (39%), Positives = 318/530 (60%), Gaps = 50/530 (9%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS-VSGSLSYATNVFSHI 91
+ +D+CK++ EL++IH Q+IK+ L +H ++RL+ FC+LS VSG L YA++VFS I
Sbjct: 11 SVLDKCKSLCELRQIHAQMIKTNLL---NHQFTVSRLIAFCSLSGVSGGLDYASSVFSRI 67
Query: 92 KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDC-LTFPFLLKECTK 149
+ + + + +I+ S +N S L LY +ML C S + P +LK C K
Sbjct: 68 QHPNSFIFFALIKGF---SDTSNPVES---LILYARMLSCLNYSSGVEFSIPSVLKACGK 121
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
L G V+GQV+K + D FV NS++ +++ G + AR +FD M NRDVVSWN+M
Sbjct: 122 LLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSM 181
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFS-------------------------------WN 238
I GYL++G++++A +LF M +R++ S W
Sbjct: 182 IAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWT 241
Query: 239 SIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY 298
S+I+ +VQ +AL+LF+EM S + +PD I SVLSA A LG ++ GKW+H Y
Sbjct: 242 SMISAYVQNRCPMKALDLFREMLSLGL----RPDGPAIVSVLSAIADLGFVEEGKWLHAY 297
Query: 299 LRRSGLDCDV-VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA-WTAMISVFALNGYGK 356
+ + ++ IG+AL+DMY KCG +E AY VF+ + + + W +MIS A++G +
Sbjct: 298 VSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAR 357
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
EA D F EME + PN +TF+GLLS C+H GLVE+G++ F M Y + P + HY CM
Sbjct: 358 EALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCM 417
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
ID+ RAG +A +I++MP E D+ W A+L HG++E+G+ A I+L P +
Sbjct: 418 IDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDS 477
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ YV L ++YAKAGR+DDV K R +M++RG++K + GCSS+ VBG VHEF
Sbjct: 478 SSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKK-IAGCSSMLVBGKVHEF 526
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/513 (37%), Positives = 310/513 (60%), Gaps = 13/513 (2%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
+ +LK+I + + + L+ D ++ + + SL YA +F ++ + +
Sbjct: 23 TISQLKQIQSHLTVTATLK--DPYAAAKIISLHAHSNARSSLFYAERLFLCLQNKSTFIW 80
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
N M++A K+ + LYK ML + P+ TF F+++ C + +G
Sbjct: 81 NTMMQAFVEKNEAV------RAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQMGLCF 134
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+GQVVKFG FVQN +I L+ CGF+ AR +FD RDVV+W +I GYL SG +
Sbjct: 135 HGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQV 194
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
+A +LF RM ++N SW ++I G+V+ G +EALE+F +MQ S + ++ +I
Sbjct: 195 LIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGF----RLNRASIVGA 250
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
L+ACA+LGA+D G+W+H Y++R + D ++GTAL+DMY KCGC+E A VF EM +D
Sbjct: 251 LTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDV 310
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
A+T +IS A + + A D F M+ EGV PN VTFV +L+AC+ G+V++G F
Sbjct: 311 YAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFES 370
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + Y++EP + HY C++D+L RAG EA++++R MP++PD + GALL C++HG+V+
Sbjct: 371 MSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQ 430
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LGE++ L+ + +V L +MYA A +++D K R M+++ IRK +PGCSS+EV
Sbjct: 431 LGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRK-LPGCSSIEV 489
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
+G V EF ++E+++ +L G+ K +K+
Sbjct: 490 NGTVCEFVTGDRSYALEEDIMFLLFGIDKQLKS 522
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/529 (39%), Positives = 306/529 (57%), Gaps = 23/529 (4%)
Query: 36 DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSD 95
++C++M++LKE H Q++ C D +L +RLL FC+ + GSL +A +F I+
Sbjct: 13 EKCRHMKQLKEAHAQVLT--CGLGTDSFAL-SRLLAFCSHPLHGSLPHAWKLFQQIQHPT 69
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
+ N MI+A K N +++Y QML G+ PD T P++LK C +
Sbjct: 70 ICICNTMIKAFVLKGKLINT------IQIYSQMLENGLYPDNYTLPYVLKACAGLQSCHL 123
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G S +GQ VK G D+FV N++I+++ + G V +AR +FDEM VSW MI GY +
Sbjct: 124 GESAHGQSVKLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAK 183
Query: 216 SGDLDVALDLFRR--MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
GD++ A LF MK R I W SII+G+VQ +E L++F+ MQS+ +E PD+
Sbjct: 184 VGDVETARMLFDEAPMKDRGI--WGSIISGYVQNNCFKEGLQMFRLMQSTGLE----PDE 237
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+ S+L ACA+LGA++ G WVH YL + G V + T L+DMY KCG ++ A +F
Sbjct: 238 AILVSILCACAHLGAMEIGVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDG 297
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M ++DT+ W AMIS A+NG G A F EME GV+P+ +TF+ + +AC++SG+ +
Sbjct: 298 MSQRDTICWNAMISGMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEA 357
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP----DVFVWGALL 449
M VY +EP HY C++D+L RAGL EA+ LI MP W ALL
Sbjct: 358 IRLLNSMCTVYNMEPKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALL 417
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C HG E+ E AQ L L+ + A YV L ++YA AG+ D V++ R +M+ RG+ K
Sbjct: 418 SACCSHGQTEVAEDAAQRLFHLEHHSGA-YVLLSNLYAAAGKQDHVRRIRKMMENRGVDK 476
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQY 558
PGCSSV+++GVVHEF + EE+ +L ++K M GF Y
Sbjct: 477 -APGCSSVKINGVVHEFIAGEETHLQMEEVHRVLEKMNKQMGYSGFNPY 524
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/509 (39%), Positives = 310/509 (60%), Gaps = 29/509 (5%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
I CK+MRELK++H ++K+ QT+D+ ++ T +L A S + YA +VF +
Sbjct: 22 IKACKSMRELKQVHAFLVKTG--QTHDN-AIATEILRLSATSDFRDIGYALSVFDQLPER 78
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRLDG 153
+ + +N +IRA A ET D H L ++ QML + P+ TFP +LK C
Sbjct: 79 NCFAWNTVIRALA----ETQDRHLDALL-VFCQMLSEATVEPNQFTFPSVLKACAVMARL 133
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF-------DEMSN--RD-- 202
G V+G ++KFG+ DD FV +++ +++ CG + A +LF D++ N RD
Sbjct: 134 AEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDER 193
Query: 203 -----VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
VV N M+ GY R G+L A +LF RM +R++ SWN +I+G+ Q G +EA+E+F
Sbjct: 194 GREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIF 253
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
M V P+++T+ SVL A + LG ++ GKWVH Y ++ + D V+G+ALVDM
Sbjct: 254 HRMMQMGD---VLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDM 310
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG +E+A VF+ +P+ + + W A+I A++G + F+ ME G+ P+ VT+
Sbjct: 311 YAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTY 370
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+ +LSAC+H+GLV++GR F M + ++P + HY CM+D+L RAG EAE LI +MP
Sbjct: 371 IAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMP 430
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M+PD +W ALLG +MH N+++G + A+ L+ + P + YV L +MYA +G +D V
Sbjct: 431 MKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAA 490
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R +MK+ IRK+ PGCS +E+DGV+HEF
Sbjct: 491 VRLMMKDMDIRKD-PGCSWIEIDGVIHEF 518
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 330/561 (58%), Gaps = 48/561 (8%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
MR LK +H QII TN+ +L +L+ FCA+ +G L YA +F I + + + YN
Sbjct: 1 MRGLKLLHAQIILHGL--TNETLTL-GKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+IR +N + L+++M+C+G+SP+ T PF+LK C + V+
Sbjct: 58 SLIRGY------SNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVH 111
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR------------------- 201
G +K G+ VFVQN++I++++ CG + AR LFD+++++
Sbjct: 112 GLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLIDIIVRNALVDMYAKCG 171
Query: 202 ---------------DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
+VVSW +MI Y + G ++VA +F +M +N+ SWNS+I+ +++
Sbjct: 172 NLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLR 231
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G+ REAL+LF +M++S V PD+ T+ S+L+AC+ LG + GK +H Y+ +
Sbjct: 232 EGQYREALDLFNKMRNSRV----VPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAY 287
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
V + +L+DMY KCG V A +F EMP K+ ++W +I AL+G G EA F EM+
Sbjct: 288 GVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQ 347
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
A+G P+ +T GLLSAC+HSGLV+ G + F M +Y V + HYACM+D+L R GL
Sbjct: 348 ADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLL 407
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
EA LI MPM+PDV VWGALLG C++HGNVE+G+++ + L++L+P + YV + ++Y
Sbjct: 408 GEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIY 467
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
+A R++DVKK R LM +RGI+K SS+E+DG ++EF + + + +L+ L
Sbjct: 468 WEAQRWEDVKKIRKLMIDRGIKKG-RAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQL 526
Query: 547 SKIMKNGGFGQYIRGLSMEAQ 567
+ +++ G+ I + EA+
Sbjct: 527 TDHLRSAGYLCNISSVFFEAE 547
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/504 (39%), Positives = 312/504 (61%), Gaps = 17/504 (3%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C +M E+K+ H+ +++ L TN+H ++R+ FC+LS G ++YA +F+ + D +
Sbjct: 12 CSSMAEVKQQHSLLLRLG-LSTNNH--AMSRIFTFCSLSKHGDINYALKLFTTLPNPDTF 68
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
YN + +A S + + L Y ML ++P+ TFP L++ C +
Sbjct: 69 LYNTLFKAFFSLSQTPSLS-----LLFYSHMLQHCVTPNAFTFPSLIRACKLEEEA---K 120
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++ V+KFG D + N++I ++ A G + AR +F MS+ +VVSW +++ GY + G
Sbjct: 121 QLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWG 180
Query: 218 DLDVALDLFRRMK-KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
+D A +F M K+N SWN++I FV+G R REA LF+ M+ VE+ ++ D+
Sbjct: 181 LVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMR---VEKKMELDRFVA 237
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
A++LSAC +GA++ G W+H Y+ ++G+ D + T ++DMY KCGC+++A+ VF +
Sbjct: 238 ATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKV 297
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLVEKGRW 395
K +W MI FA++G G++A F+EME E V P+ +TFV +L+ACAHSGLVE+G +
Sbjct: 298 KRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWY 357
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M V+ ++P HY CM+D+L+RAG EA+++I MPM PD V GALLG C++H
Sbjct: 358 YFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIH 417
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
GN+ELGE+V +I+LDP N YV L +MYA G+++ V R LM +RG++KE PG S
Sbjct: 418 GNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKE-PGFS 476
Query: 516 SVEVDGVVHEFSMKGSPKVVKEEL 539
+E++GVV+EF G + E +
Sbjct: 477 MIEMEGVVNEFVAGGRDHPLAEAI 500
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/579 (36%), Positives = 334/579 (57%), Gaps = 61/579 (10%)
Query: 36 DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSD 95
++C +MR LK +H QII TN+ +L +L+ FCA+ +G L YA +F I + +
Sbjct: 122 EKCSSMRGLKLLHAQIILHGL--TNETLTL-GKLISFCAVDDAGDLQYAQRMFDQIPQPN 178
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
+ YN +IR +N + L+++M+C+G+SP+ T PF+LK C +
Sbjct: 179 KFMYNSLIRG------YSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWE 232
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI----- 210
V+G +K G+ VFVQN++I++++ CG + AR LFD+++++ +VSWN+MI
Sbjct: 233 AVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIEITGV 292
Query: 211 ------------------------------------------IGYLRSGDLDVALDLFRR 228
Y + G ++VA +F +
Sbjct: 293 KIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQ 352
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
M +N+ SWNS+I+ +++ G+ REAL+LF +M++S V PD+ T+ S+L+AC+ LG
Sbjct: 353 MPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRV----VPDEATLVSILAACSQLGD 408
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
+ GK +H Y+ + V + +L+DMY KCG V A +F EMP K+ ++W +I
Sbjct: 409 LVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGA 468
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
AL+G G EA F EM+A+G P+ +T GLLSAC+HSGLV+ G + F M +Y V
Sbjct: 469 LALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXR 528
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ HYACM+D+L R GL EA LI MPM+PDV VWGALLG C++HGNVE+G+++ + L
Sbjct: 529 EIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQL 588
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM 528
++L+P + YV + ++Y +A R++DVKK R LM +RGI+K SS+E+DG ++EF +
Sbjct: 589 LELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKG-RAISSIEIDGCIYEFMV 647
Query: 529 KGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSMEAQ 567
+ + +L+ L+ +++ G+ I + EA+
Sbjct: 648 DDKRHKISSSIYAMLDQLTDHLRSAGYLCNISSVFFEAE 686
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/563 (35%), Positives = 322/563 (57%), Gaps = 22/563 (3%)
Query: 1 MSKKLQMVSYSLLNSPAKVSPPNKESTKLILR----NAIDECKNMRELKEIHTQIIKSPC 56
+SK + + SP + P + + +L + + +C ++K++H II++
Sbjct: 11 VSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGL 70
Query: 57 LQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDT 116
Q + + + R+L + + SY VF + + + + MIR A + + T
Sbjct: 71 SQCSYVLTKLIRMLTKVDVPMG---SYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSEST 127
Query: 117 HSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQ 175
+ Y +M G+ P TF L K C L+ +G V+ Q + G D++V
Sbjct: 128 N------FYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVG 181
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
NS+I L++ CGF+ AR +FDEMS RDVVSW +I+ Y + GD++ A LF + +++
Sbjct: 182 NSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMV 241
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
+W +++TG+ Q GR +EALE FQ+MQ +E D++T+A V+SACA LGA+ H W+
Sbjct: 242 AWTAMVTGYAQNGRPKEALEYFQKMQDVGMET----DEVTLAGVISACAQLGAVKHANWI 297
Query: 296 HGYLRRSGL--DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG 353
RSG +VV+G+AL+DMY KCG + AY VF+ M +++ ++++MI +A++G
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHG 357
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
A F +M +RPN VTF+G+LSAC+H+GLVE+GR F M + V P HY
Sbjct: 358 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHY 417
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP 473
ACM+D+L RAG EA L+++MPMEP+ VWGALLG C++HGN ++ + A L L+P
Sbjct: 418 ACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEP 477
Query: 474 LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE-VDGVVHEFSMKGSP 532
Y+ L ++YA AGR+++V K R +++E+G +K PGCS E +G +H+F +
Sbjct: 478 NGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKN-PGCSWFEGKNGEIHDFFAGDTT 536
Query: 533 KVVKEELVLILNGLSKIMKNGGF 555
E+ L L + +++ G+
Sbjct: 537 HPRSSEIRQALKQLIERLRSHGY 559
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/517 (37%), Positives = 312/517 (60%), Gaps = 19/517 (3%)
Query: 34 AIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR 93
++ C + +LK+IH ++K Q+N L+T++L C G +SYAT +F +
Sbjct: 16 SLKNCFKITQLKKIHAHVVKLSLSQSN---FLVTKMLDSC--DNLGHVSYATLLFKQLLH 70
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC---TGISPDCLTFPFLLKECTKR 150
+++TYN +IR A ++ H + ++ QML + PD TFPF++K CT
Sbjct: 71 PNIFTYNAIIRTYA------HNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGI 124
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
L +G V+G V KFG +N++I ++ G +T+A +F+EMS+RDV+SWN++I
Sbjct: 125 LCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLI 184
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY++ G ++ A +LF M R I SW ++ITG+ + G +AL++F+EMQ +E
Sbjct: 185 FGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIE---- 240
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD+I+I +VL ACA LGA++ GKW+H Y ++G I AL++MY KCGC++ A+ +
Sbjct: 241 PDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNL 300
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F ++ +KD ++W+ MI A +G G EA F EM V PN +TF+G+L AC+H+GL
Sbjct: 301 FDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLW 360
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
++G F +M Y +EP + HY C+ID+L R+G +A I MP++PD +W +LL
Sbjct: 361 DEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLS 420
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
C++H N+++ + L++L+P YV L +MYA+ G+++DV R L++ + I+K
Sbjct: 421 SCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKK- 479
Query: 511 VPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
PG SS+EV+ VV EF K +E+ IL GL+
Sbjct: 480 TPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWILEGLA 516
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/481 (41%), Positives = 306/481 (63%), Gaps = 31/481 (6%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M++LK++H Q+IK+ Q D + LL F A+S L YA +F + R + ++YN
Sbjct: 1 MQDLKQLHAQMIKTA--QIRDPLA-AAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQML--CTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+IRA SE+ND L ++ +M+ C+ + P+C TFP + K C + G
Sbjct: 58 TLIRA----LSESNDP--CDALLVFIEMVEDCS-VEPNCFTFPSVFKACGRAERLREGRQ 110
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF---------DEMSNR------DV 203
V+G VKFG+ D FV ++V+ ++++CG + A LF D + ++ DV
Sbjct: 111 VHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDV 170
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
V WN MI GY+R G+L+VA +LF M +R++ SWN +I G+ Q G +EA+E+F+EMQ +
Sbjct: 171 VLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMA 230
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
V P+ +T+ SVL A + LGA++ GKWVH Y R+ + D V+G+AL+DMY KCG
Sbjct: 231 EV----PPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGS 286
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
+E+A VF+ +PK++ + W+ +I+ A++G K+ D F +ME GV P+ VT++GLLSA
Sbjct: 287 IEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSA 346
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+H+GLV +GRW F M V +EP + HY CM+D+L RAGL E+E LI +MP++PD
Sbjct: 347 CSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDV 406
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+W ALLG C+MHGNVE+G++VA++L++L P + YV L ++YA G ++ V K R +MK
Sbjct: 407 IWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMK 466
Query: 504 E 504
E
Sbjct: 467 E 467
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/474 (41%), Positives = 288/474 (60%), Gaps = 11/474 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF DL ++N +I K E K + +YK M G+ PD +
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYK-KIGEAE-----KAIYVYKLMESEGVKPDDV 258
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T L+ C+ D G Y V + G+ + + N+++ +F CG + AR +FD +
Sbjct: 259 TMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNL 318
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
R +VSW MI GY R G LDV+ LF M+++++ WN++I G VQ R ++AL LFQ
Sbjct: 319 EKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ+S+ KPD+IT+ LSAC+ LGA+D G W+H Y+ + L +V +GT+LVDMY
Sbjct: 379 EMQTSNT----KPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMY 434
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + A VF + +++L +TA+I AL+G A F EM G+ P+ +TF+
Sbjct: 435 AKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFI 494
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
GLLSAC H G+++ GR F M+ + + P + HY+ M+D+L RAGL EA+RL+ SMPM
Sbjct: 495 GLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPM 554
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
E D VWGALL GC+MHGNVELGEK A+ L++LDP + YV L MY +A ++D K+
Sbjct: 555 EADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRA 614
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
R +M ERG+ K +PGCSS+EV+G+V EF ++ + E++ L+ L + M++
Sbjct: 615 RRMMNERGVEK-IPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRS 667
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/491 (27%), Positives = 230/491 (46%), Gaps = 89/491 (18%)
Query: 21 PPNKEST-KLILRNAI----DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL 75
P N ST +L N + ++CK + LK+I Q+I + + S RL+ FCAL
Sbjct: 41 PINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASS---RLIAFCAL 97
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML---CTG 132
S S L Y+ + I+ +++++N+ IR SE+ + + LYKQML C
Sbjct: 98 SESRYLDYSVKILKGIENPNIFSWNVTIRG----FSESENPK--ESFLLYKQMLRHGCCE 151
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
PD T+P L K C +G + G V+K + V N+ I +F +CG + +AR
Sbjct: 152 SRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENAR 211
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+FDE RD+VSWN +I GY + G+ A +
Sbjct: 212 KVFDESPVRDLVSWNCLINGYKKIGE-------------------------------AEK 240
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
A+ +++ M+S E VKPD +T+ ++S+C+ LG ++ GK + Y++ +GL + +
Sbjct: 241 AIYVYKLMES----EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY------------------ 354
AL+DM+ KCG + A +F + K+ ++WT MIS +A G
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 355 -------------GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
G++A F+EM+ +P+ +T + LSAC+ G ++ G W + R
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW---IHR 413
Query: 402 HV--YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
++ Y + +V ++D+ ++ G SEA + + + + A++GG +HG+
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDAS 472
Query: 460 LGEKVAQYLID 470
+ID
Sbjct: 473 TAISYFNEMID 483
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/480 (38%), Positives = 297/480 (61%), Gaps = 11/480 (2%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S+SG +S A VF + D+ T+N+MI S + +KL+ +M + P
Sbjct: 165 SLSGEVSVARGVFDRSSKGDVVTWNVMI------SGYNRSKQFDESMKLFDEMERMRVLP 218
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
+T +L C+K D VG V+ V + ++N++I ++ ACG + +A +F
Sbjct: 219 SSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIF 278
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D M +RDV+SW A++ G+ G + +A + F +M +R+ SW ++I G++Q R +E L
Sbjct: 279 DNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLS 338
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
LF+EMQ++++ KPD+ T+ S+L+ACA+LGA++ G+W+ Y+ ++ + D +G AL+
Sbjct: 339 LFREMQAANI----KPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALI 394
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DMY CG VE+A +F MP +D ++WTA+I A+NGYG+EA D F +M + P+ V
Sbjct: 395 DMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEV 454
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
T +G+L AC HSG+V+KG+ F M + +EP+V HY CM+D+L RAG EA +I++
Sbjct: 455 TCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKN 514
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP++P+ VWG+LLG C++H + E+ E AQ +++L+P N A YV LC++YA R++ +
Sbjct: 515 MPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKL 574
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ R LM +RGI+K PGCS +E++G VHEF +E+ L+ +S +K G+
Sbjct: 575 HEVRKLMMDRGIKK-TPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGY 633
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 230/485 (47%), Gaps = 88/485 (18%)
Query: 7 MVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLI 66
M+S + L+ P P ++ L L I CK+M +LK+IH+Q I C + +
Sbjct: 1 MISATTLSPPPTHLPSLPQTPPLSL---IKTCKSMAQLKQIHSQTI---CTGLISNPIVP 54
Query: 67 TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANA---CKSSETNDTHSGKCLK 123
+++ FC G + YA VF + + + +N MI+ + C +S +
Sbjct: 55 AQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNS---------AVS 105
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
+Y +ML G+ PD T+PFLLK T+ G ++ +VK G +VFVQN++I L+
Sbjct: 106 MYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYS 165
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
G V+ AR +FD S DVV+WN MI GY RS D
Sbjct: 166 LSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFD----------------------- 202
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
E+++LF EM+ V P IT+ SVLSAC+ L ++ GK VH Y++
Sbjct: 203 --------ESMKLFDEMERMR----VLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLK 250
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA------------- 350
++ V+ AL+DMY CG ++ A G+F M +D ++WTA+++ F
Sbjct: 251 IEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFD 310
Query: 351 -------------LNGY-----GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
++GY KE FREM+A ++P+ T V +L+ACAH G +E
Sbjct: 311 KMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALEL 370
Query: 393 GRWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
G W + ++ ++ V + +ID+ G +A R+ +MP D W A++ G
Sbjct: 371 GEWIKAYIDKNEIKIDSFVGN--ALIDMYFNCGNVEKAIRIFNAMPHR-DKISWTAVIFG 427
Query: 452 CQMHG 456
++G
Sbjct: 428 LAING 432
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/451 (42%), Positives = 278/451 (61%), Gaps = 6/451 (1%)
Query: 106 NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK-RLDGLVGASVYGQVV 164
NA S G+ + M G +P +T+ +L C K D L+G V+G+VV
Sbjct: 91 NALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVV 150
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
GV D+ V+N+++ ++ C + SA +FD M R VVSW +++ G R G +D A D
Sbjct: 151 GSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARD 210
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
LF RM +R+ SW ++I G+V R REALE+F+EMQ S+V D+ T+ SV++ACA
Sbjct: 211 LFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNV----SADEFTMVSVITACA 266
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
LGA++ G+WV Y+ R G+ D +G AL+DMY KCG +ERA VFK M +D WTA
Sbjct: 267 QLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTA 326
Query: 345 MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
+I A+NGY +EA + F M P+ VTF+G+L+AC H+GLV+KGR F+ M Y
Sbjct: 327 IILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAY 386
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
+ P+V HY C+ID+L RAG +EA I MPM P+ +WG LL C++HGN E+GE V
Sbjct: 387 NIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELV 446
Query: 465 AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
A+ L++LDP N Y+ L ++YAK R++DV++ R+ + E+GI+KE PGCS +E+DG++H
Sbjct: 447 AERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKE-PGCSLIEMDGIIH 505
Query: 525 EFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
EF + +E+ L + + N G+
Sbjct: 506 EFVAGDQSHPMSKEIYSKLESIISDLNNVGY 536
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 159/372 (42%), Gaps = 77/372 (20%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA----SVYGQVVKFGVCDDVFVQNSVIS 180
Y +ML G PD TFP LLK + G A +V+ VV+ G+ + V +S+++
Sbjct: 7 YARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVA 66
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
+ A G +AR L E V+WNA+I G+ R
Sbjct: 67 AYTAGGDGAAARALVGECDTP--VAWNALISGHNR------------------------- 99
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID--HGKWVHGY 298
GGR E+ F +M + P +T SVLSAC G D G VHG
Sbjct: 100 ------GGRFGESCGSFVDMARAG----AAPTPVTYVSVLSACGK-GTRDVLLGMQVHGR 148
Query: 299 LRRSGLDCDVVIGTALVDMYGKC-------------------------------GCVERA 327
+ SG+ D+ + ALVDMY +C G V+ A
Sbjct: 149 VVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEA 208
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
+F MP++DT++WTAMI + +EA + FREM+ V + T V +++ACA
Sbjct: 209 RDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQL 268
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
G +E G W V M ++ + +ID+ S+ G A + + M D F W A
Sbjct: 269 GALEMGEWVRVYMSR-QGIKMDAFVGNALIDMYSKCGSIERALDVFKGM-HHRDKFTWTA 326
Query: 448 LLGGCQMHGNVE 459
++ G ++G E
Sbjct: 327 IILGLAVNGYEE 338
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 24/236 (10%)
Query: 270 KPDKITIASVLSACAYL----GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
+PD T ++L A A G+ + VH ++ R G+ + + ++LV Y G
Sbjct: 16 RPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGA 75
Query: 326 RAYGVFKEMPKKDT-LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
A + E DT +AW A+IS G E+ +F +M G P VT+V +LSAC
Sbjct: 76 AARALVGEC---DTPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSAC 132
Query: 385 AHSGLVEKGRWCFVMMRHVY------LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
KG ++ V+ V P + ++D+ + A ++ M +
Sbjct: 133 G------KGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQV 186
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
V W +LL G G V+ + + + D ++ + + D Y A RF +
Sbjct: 187 R-SVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVS---WTAMIDGYVWAARFRE 238
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/563 (35%), Positives = 322/563 (57%), Gaps = 22/563 (3%)
Query: 1 MSKKLQMVSYSLLNSPAKVSPPNKESTKLILR----NAIDECKNMRELKEIHTQIIKSPC 56
+SK + + SP + P + + +L + + +C ++K++H II++
Sbjct: 11 VSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGL 70
Query: 57 LQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDT 116
Q + + + R+L + + SY VF + + + + MIR A + + T
Sbjct: 71 SQCSYVLTKLIRMLTKVDVPMG---SYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSEST 127
Query: 117 HSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQ 175
+ Y +M G+ P TF L K C L+ +G V+ Q + G D++V
Sbjct: 128 N------FYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVG 181
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
NS+I L++ CGF+ AR +FDEMS RDVVSW +I+ Y + GD++ A LF + +++
Sbjct: 182 NSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMV 241
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
+W +++TG+ Q GR +EALE FQ+MQ +E D++T+A V+SACA LGA+ H W+
Sbjct: 242 AWTAMVTGYAQNGRPKEALEYFQKMQDVGMET----DEVTLAGVISACAQLGAVKHANWI 297
Query: 296 HGYLRRSGL--DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG 353
RSG +VV+G+AL+DMY KCG + AY VF+ M +++ ++++MI +A++G
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHG 357
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
A F +M +RPN VTF+G+LSAC+H+GLVE+GR F M + V P HY
Sbjct: 358 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHY 417
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP 473
ACM+D+L RAG EA L+++MPMEP+ VWGALLG C++HGN ++ + A L L+P
Sbjct: 418 ACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEP 477
Query: 474 LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE-VDGVVHEFSMKGSP 532
Y+ L ++YA AGR+++V K R +++E+G +K PGCS E +G +H+F +
Sbjct: 478 NGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKN-PGCSWFEGKNGEIHDFFAGDTT 536
Query: 533 KVVKEELVLILNGLSKIMKNGGF 555
E+ L L + +++ G+
Sbjct: 537 HPRSSEIRQALKQLIERLRSHGY 559
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/521 (36%), Positives = 306/521 (58%), Gaps = 20/521 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
ID+ K + L +IH + + DHH ++ L S+ G L Y+ +F +
Sbjct: 37 IDKSKTISHLLQIHAVLFRHGL----DHHPILNFKLQRSYASL-GRLDYSVALFGRTQNP 91
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
++ + +I +A + + L Y QML G+ P+ TF +LK C
Sbjct: 92 SVFFWTAIIHGHALRGLHE------QALNFYAQMLTQGVEPNAFTFSSILKLCPIE---- 141
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G +++ Q VK G D++V+ ++ ++ G V SA+ LFD M + +VS AM+ Y
Sbjct: 142 PGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYA 201
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+ G+LD A LF M++R+ WN +I G+ Q G EAL LF+ M ++ KP+++
Sbjct: 202 KHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM----LKAKAKPNEV 257
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ SVLSAC LGA++ G+WVH Y+ +G+ +V +GTALVDMY KCG +E A VF ++
Sbjct: 258 TVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKI 317
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
KD +AW +MI +A++G+ +EA F+ M G+ P ++TF+G+LSAC HSG V +G
Sbjct: 318 DDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGW 377
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M+ Y +EP + HY CM+++L RAG +A L+++M +EPD +WG LLG C++
Sbjct: 378 DIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRL 437
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
HG + LGEK+ + L+D + N Y+ L ++YA G +D V + R +MK+ G++KE PGC
Sbjct: 438 HGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKE-PGC 496
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
SS+EV+ VHEF G ++E+ ++L ++ +K+ G+
Sbjct: 497 SSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGY 537
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/528 (38%), Positives = 312/528 (59%), Gaps = 12/528 (2%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS-DLYTY 99
M++ KE HTQ+I + T+ SL ++ F AL SG + YA + ++ +
Sbjct: 1 MKQFKEAHTQLIINGL--THPPPSL-RPIISFSALDPSGDIDYALLLLLRTSTPPTVFLF 57
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
N IR + + S + L+ +M ++P+ TF FL + C+ + +G
Sbjct: 58 NTTIRGFSRARRPGSLLSS---VLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQF 114
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+G V+K DVFV+NS+I + CG + AR +FDE S DVVSWN+MI G +R+G++
Sbjct: 115 HGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNI 174
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
AL LF +M +RN SWN +I+G+ Q G+ +EAL LF+EMQ E P+ + SV
Sbjct: 175 LEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQE----PNSAILVSV 230
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
LSAC+ LGA+DHG WVH Y+ + + D ++ AL+DMY KCG ++ A F K+D
Sbjct: 231 LSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDV 290
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
A+TA IS A+NG +EA F +M+ EG+ P+ V+++ +L AC+H+G VEKG F
Sbjct: 291 SAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFAS 350
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M V+ + P + HYACM+D+L RAGL EAE+ + SMP++PD +WGALLG C+++GN E
Sbjct: 351 MSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAE 410
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
+G++V L++ D + Y+ L ++YA++ + +D ++ R M+ R + + VPGCS +EV
Sbjct: 411 MGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDR-VPGCSLIEV 469
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSMEAQ 567
G VHEF EE+ L+ + K +K G+ + R + + +
Sbjct: 470 AGFVHEFFSGDRSHEKTEEIYLMWEEIVKEIKKFGYREETRAVVFDVE 517
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/560 (36%), Positives = 337/560 (60%), Gaps = 28/560 (5%)
Query: 13 LNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFF 72
+N + P S L I+ C+ +R+L +IH IKS ++ + I R F
Sbjct: 1 MNPTQTLYSPGGNSPASSLFPQINTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILR---F 57
Query: 73 CALSV--SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
CA S L YA +F+ + + + +++N +IR SE+++ + + L+ +M+
Sbjct: 58 CATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRG----FSESDEDKALIAITLFCEMMS 113
Query: 131 TG-ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
I P+ TFP +LK C K G ++G +K+G D FV ++++ +++ CG +
Sbjct: 114 DEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMK 173
Query: 190 SARMLFDE---------MSNR-----DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
A +LF + M +R +VV WN MI GY+R GD A LF +M++R++
Sbjct: 174 DACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVV 233
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SWN++I+G+ Q G ++A+E+F+EM+ E ++P+ +T+ SVL A + LG+++ G+W+
Sbjct: 234 SWNTMISGYSQNGFFKDAVEVFREMKKG---EDIRPNYVTLVSVLPAVSRLGSLELGEWL 290
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H Y SG+ D V+G+AL+DMY KCG +E+A VF+ +P+++ + W+AMI+ FA++G
Sbjct: 291 HLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQA 350
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+A D F +M GVRP+ V ++ LL+AC+H+GLVE+GR F M V +EP + HY C
Sbjct: 351 GDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGC 410
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
M+D+L R GL EAE I +MP++PD +W ALLG C+MH NVE+G++VA L+D+ P +
Sbjct: 411 MVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHD 470
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
YV L +MYA G + +V + R MKE IRK+ PGCS +++DGV+HEF ++
Sbjct: 471 SGAYVALSNMYASQGNWSEVSEMRLRMKEMDIRKD-PGCSWIDIDGVLHEFLVEDDSHPR 529
Query: 536 KEELVLILNGLSKIMKNGGF 555
+E+ +L +S ++ G+
Sbjct: 530 AKEINSMLVEISDKLRLAGY 549
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/538 (39%), Positives = 308/538 (57%), Gaps = 24/538 (4%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PNK + +++ A E K R +H IK D + L + + F+ A G L
Sbjct: 124 PNKFTFPFVIK-AASELKASRVGTAVHGMAIKLSF--GMDLYILNSLVRFYGA---CGDL 177
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC----LKLYKQMLCTGISPDC 137
S A +F I D+ ++N MI A A G C L+L+ +M + P+
Sbjct: 178 SMAERLFKGISCKDVVSWNSMISAFA----------QGNCPEDALELFLKMERENVMPNS 227
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T +L C K+LD G V + + G+ D+ + N+++ ++ CG V A+ LFDE
Sbjct: 228 VTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDE 287
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M RDV SW M+ GY + GD D A +F M + I +WN +I+ + Q G+ +EAL +F
Sbjct: 288 MPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIF 347
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
E+Q S + KPD++T+ S LSACA LGAID G W+H Y++R G+ + + ++LVDM
Sbjct: 348 NELQLSKI---AKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDM 404
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG +E+A VF + ++D W+AMI+ ++G GK A D F EM+ V+PN VTF
Sbjct: 405 YAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTF 464
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+L AC+H+GLV++GR F M VY V P + HYACM+DIL RAG EA LI M
Sbjct: 465 TNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMS 524
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
P VWGALLG C +H NVELGE + L+ L+P NH V L ++YAK GR++ V +
Sbjct: 525 TTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSE 584
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R LM++ ++KE PGCSS+E +G VHEF + + + + L ++ +K+ G+
Sbjct: 585 LRKLMRDTELKKE-PGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGY 641
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 229/468 (48%), Gaps = 82/468 (17%)
Query: 26 STKLILRN-----AIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
+ L+ RN ID+C + ++LKE+H +++++ D S ++L ALS +
Sbjct: 18 NNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLF--FDPFS-ASKLFTASALSSFST 74
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
L YA N+F I + +LYT+N +IRA A S D + L C + P+ TF
Sbjct: 75 LDYARNLFDQIPQPNLYTWNTLIRAYASSS----DPFQSFVIFLDLLDKCEDL-PNKFTF 129
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
PF++K ++ VG +V+G +K D+++ NS++ + ACG ++ A LF +S
Sbjct: 130 PFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISC 189
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
+DVVSWN+MI + + + AL+LF +M++ N+
Sbjct: 190 KDVVSWNSMISAFAQGNCPEDALELFLKMERENVM------------------------- 224
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
P+ +T+ VLSACA ++ G+WV Y+ R G+ D+ + A++DMY K
Sbjct: 225 ----------PNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTK 274
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAM-------------------------------ISVF 349
CG V+ A +F EMP++D +WT M IS +
Sbjct: 275 CGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAY 334
Query: 350 ALNGYGKEAFDTFREMEAEGV-RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
NG KEA F E++ + +P+ VT V LSACA G ++ G W V ++ +V
Sbjct: 335 EQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIV-L 393
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ + + ++D+ ++ G +A + S+ E DV+VW A++ G MHG
Sbjct: 394 NCHLISSLVDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHG 440
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/499 (41%), Positives = 310/499 (62%), Gaps = 31/499 (6%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS-VSGSLSYATNVFSHI 91
+ +D+CK++ EL++IH Q+IK+ L +H ++RL+ FC+LS VSG L YA++VFS I
Sbjct: 11 SVLDKCKSLCELRQIHAQMIKTNLL---NHQFTVSRLIAFCSLSGVSGGLDYASSVFSRI 67
Query: 92 KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDC-LTFPFLLKECTK 149
+ + + + +I+ S +N S L LY +ML C S + P +LK C K
Sbjct: 68 QHPNSFIFFALIKGF---SDTSNPVES---LILYARMLSCLNYSSGVEFSIPSVLKACGK 121
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
L G V+GQV+K + D FV NS++ +++ G + AR +FD M NRDVVSWN+M
Sbjct: 122 LLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSM 181
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I GYL++G++++A +LF M +R++ S N++I G+ +E L L +
Sbjct: 182 IAGYLKAGEIELASELFDEMPERDLVSCNAMIDGY-----GKEMLSL-----------GL 225
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV-VIGTALVDMYGKCGCVERAY 328
+PD I SVLSA A LG ++ GKW+H Y+ + ++ IG+AL+DMY KCG +E AY
Sbjct: 226 RPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAY 285
Query: 329 GVFKEMPKKDTLA-WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF+ + + + W +MIS A++G +EA D F EME + PN +TF+GLLS C+H
Sbjct: 286 HVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHG 345
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GLVE+G++ F M Y + P + HY CMID+ RAG +A +I++MP E D+ W A
Sbjct: 346 GLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKA 405
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+L HG++E+G+ A I+L P + + YV L ++YAKAGR+DDV K R +M++RG+
Sbjct: 406 ILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGV 465
Query: 508 RKEVPGCSSVEVDGVVHEF 526
+K + GCSS+ V+G VHEF
Sbjct: 466 KK-IAGCSSMLVNGKVHEF 483
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/500 (39%), Positives = 292/500 (58%), Gaps = 21/500 (4%)
Query: 65 LITRLLFFCALSVSGSLSYATNVFSHIKRS-DLYTYNIMIRANACKSSETNDTHSGKCLK 123
L++R + C S G SYA ++F+ I + D+Y YN N K+ ++ TH +
Sbjct: 12 LLSRFIHAC--SSLGFYSYAYSLFTSITHAPDIYLYN-----NIIKALSSSPTHPKASIF 64
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF- 182
LY + G+ PD +FPF LK T+ G ++ Q ++FG+ D+ V + + ++
Sbjct: 65 LYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYS 124
Query: 183 -MACGFVTSARMLFD--EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
G + AR +FD MS DV WNAM+ GY + GDL A DLF RM +RN+ SW +
Sbjct: 125 SFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTA 184
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+ITG+ Q R +A+ LF+ MQ +VE PD+I + L+ACA LGA++ G+W+ Y+
Sbjct: 185 LITGYAQANRPHDAIALFRRMQLENVE----PDEIAMLVALTACARLGALELGEWIRHYI 240
Query: 300 RRSGL-DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
R GL ++ + AL+DMY K G ++ A VF+ M K + WT MI+ AL+G G EA
Sbjct: 241 DRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEA 300
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
+ F ME V+PN +TF+ +LSAC+H GLV+ GRW F M Y +EP + HY CMID
Sbjct: 301 LEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMID 360
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+L RAG EA+ L+ MP EP+ +WG+LL C HG+ ELGE Q+L++L+P N
Sbjct: 361 LLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGN 420
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
Y L ++YA GR+++ + R +M + G++K +PG S +EV+ VHEF + ++ +
Sbjct: 421 YALLSNIYASRGRWNESRVVRKVMWDAGVKK-MPGGSLIEVNNRVHEFI---AGEISHSQ 476
Query: 539 LVLILNGLSKIMKNGGFGQY 558
I LSKI + G Q+
Sbjct: 477 FDRIQEVLSKINRQLGLSQH 496
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/505 (38%), Positives = 292/505 (57%), Gaps = 16/505 (3%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P ++ L + + C++ L +IH ++ Q N S F A + G
Sbjct: 18 PAIFTSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLSQ-----FIDACTSLGLS 72
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
SYA ++FS+ DL YN I+A + SS N + LY ++ G+ PD + P
Sbjct: 73 SYAFSIFSNKTHPDLRLYNTAIKALSKTSSPIN------AIWLYTRIRIDGLRPDSYSIP 126
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
+LK K VG ++ Q V + DV V S+I ++ +CGFV+ AR LFD + +
Sbjct: 127 SVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFK 186
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
DV WNAM+ GY++ G+L A +F M +RN+ SW ++I G+ Q R EA+ELF++MQ
Sbjct: 187 DVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQ 246
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
VE PD+I + +VLSACA LGA++ G+W+H Y+ + GL V + AL+DMY K
Sbjct: 247 LEEVE----PDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKS 302
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + RA VF+ M +K + W+ +I+ AL+G G EA D F ME VRPN VTFV +L
Sbjct: 303 GNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAIL 362
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
SAC+H G+V+ GR+ F M+ +Y +EP + HY CMID+L+RAG EA++L+ MP E +
Sbjct: 363 SACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEAN 422
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+WG+LL H + EL + ++L L+P N YV L + YA G++++ R L
Sbjct: 423 AMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKL 482
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEF 526
M+ G++K PG S +E++ +V+EF
Sbjct: 483 MRNAGVKK-APGGSVIEINNIVYEF 506
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/553 (38%), Positives = 325/553 (58%), Gaps = 54/553 (9%)
Query: 23 NKESTKLILRNAIDECK-NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
+K S K IL +C ++ LK+ H I+++ LQ D + + + + +S + L
Sbjct: 28 SKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQ--DSYIAGSLVKSYANVSTNRYL 85
Query: 82 SYATN--VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
S+ ++ VF +++ +++ +N MI+ E N+ K + LY +M+ P+ T
Sbjct: 86 SFESSLRVFDFVRKPNVFLWNCMIKV----CIENNEPF--KAILLYYEMMVAHFRPNKYT 139
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
+P +LK C+ G V+ +VK G+ D + +S I ++ + G + AR + D+
Sbjct: 140 YPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKG 199
Query: 200 NR-DVVSWNAMIIGYLRSGDLDVALDLFR------------------------------- 227
D V WNAMI GYLR G+++ A +LF
Sbjct: 200 GEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFF 259
Query: 228 -RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
MK+R+ SW+++I G++Q G EALE+F +MQ +E ++P K + SVLSACA L
Sbjct: 260 DEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQ----KEKIRPRKFVLPSVLSACANL 315
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
GA+D G+W+H Y +R+ + D V+GT+LVDMY KCG ++ A+ VF++M K+ +W AMI
Sbjct: 316 GALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMI 375
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
A++G ++A D F +M+ + PN +TFVG+L+ACAH GLV+KG F MR Y V
Sbjct: 376 GGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGV 432
Query: 407 EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
EP + HY C++D+L RAGL +EAE+++ S+P EP VWGALLG C+ HGNVELGE+V +
Sbjct: 433 EPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGK 492
Query: 467 YLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD-GVVHE 525
L++L+P N Y L ++YAKAGR+++V + R LMKERGI K PG S +++ G VH+
Sbjct: 493 ILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGI-KTTPGTSIIDLGRGEVHK 551
Query: 526 FSM-KGSPKVVKE 537
F + GS VK+
Sbjct: 552 FIIGDGSHPQVKD 564
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/498 (38%), Positives = 306/498 (61%), Gaps = 21/498 (4%)
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
H++ IT LL G LS A +VF+ + DL T+N MI + +
Sbjct: 196 HNASITMLL------SCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAI------EA 243
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
+K+YK+M + P+ +T ++ C++ D +G + + + G+ + + N+++ +
Sbjct: 244 IKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDM 303
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
++ CG + +AR+LFD M+ + +VSW M++GY R G LDVA ++ ++ ++++ WN+II
Sbjct: 304 YVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAII 363
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
+G VQ + +EAL LF EMQ ++E PDK+T+ + LSAC+ LGA+D G W+H Y+ R
Sbjct: 364 SGCVQAKQGKEALALFHEMQIRTIE----PDKVTMVNCLSACSQLGALDVGIWIHHYIER 419
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
L DV +GTALVDMY KCG + RA VF+E+P+++ L WTA+I AL+G ++A
Sbjct: 420 HKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSY 479
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F +M G+ P+ +TF+G+LSAC H GLVE+GR F M + V P + HY+CM+D+L
Sbjct: 480 FSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLG 539
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAG EAE L+++MPM D V GAL C+++GNV++GE+ A L+++DP + YV
Sbjct: 540 RAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVL 599
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG----SPKVVKE 537
L MY++A + + + R LM ++G+ K PGCS VE++G+VHEF ++ + + E
Sbjct: 600 LASMYSEAKMWKEARSARKLMNDKGVEK-TPGCSLVEINGIVHEFVVRDVSHPQSEWIYE 658
Query: 538 ELVLILNGLSKIMKNGGF 555
LV + L I++ G+
Sbjct: 659 CLVTLTKQLDVIVRKHGY 676
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 231/462 (50%), Gaps = 80/462 (17%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + ++ CK++ +LK+I Q++ + ++ S RL+ FCALS S L Y T +
Sbjct: 60 LLSILERCKSLVQLKQIQAQMVSTGLIENGFAAS---RLVAFCALSESKELDYCTRILYR 116
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTK 149
IK +++++N IR E+ D G LYK+ML G + PD T+P LLK C
Sbjct: 117 IKELNVFSWNAAIRGYV----ESGDIEGG--FMLYKRMLLGGTLKPDNHTYPLLLKGCCG 170
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+ +G V G V+KFG D+FV N+ I++ ++CG ++ A +F++ RD+V+WN+M
Sbjct: 171 QYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSM 230
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I TG V+ G A EA+++++EM++ E V
Sbjct: 231 I-------------------------------TGCVKRGLAIEAIKIYKEMEA----EKV 255
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
+P++IT+ ++S+C+ + ++ GK H Y++ GL+ + + AL+DMY KCG + A
Sbjct: 256 RPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARV 315
Query: 330 VFKEMPKKDTLAWTAMISVFALNGY-------------------------------GKEA 358
+F M +K ++WT M+ +A G+ GKEA
Sbjct: 316 LFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEA 375
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC-FVMMRHVYLVEPHVYHYACMI 417
F EM+ + P+ VT V LSAC+ G ++ G W + RH ++ V ++
Sbjct: 376 LALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSID--VALGTALV 433
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
D+ ++ G + A ++ +P + + W A++ G +HGN +
Sbjct: 434 DMYAKCGNIARALQVFEEIP-QRNCLTWTAVICGLALHGNAQ 474
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/487 (39%), Positives = 297/487 (60%), Gaps = 18/487 (3%)
Query: 63 HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKC 121
H+ I +L C G L A +F DL ++N +I C ++ +
Sbjct: 193 HNAIIHVLVSC-----GELLAARKLFDESCVRDLVSWNSIINGYVRCGLAD-------EA 240
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
LY +M + PD +T ++ + + +G ++ + + G+ V + N+++ +
Sbjct: 241 FDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDM 300
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
++ C + +A++LF+ M+ + VVSW M+IGY + G L+ A+ LF M ++++ WN++I
Sbjct: 301 YIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALI 360
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
GFVQ R++EAL LF EMQ+SSV PDKIT+ + LSAC+ LGA+D G W+H Y+ +
Sbjct: 361 GGFVQAKRSKEALALFHEMQASSV----APDKITVVNCLSACSQLGALDVGIWMHHYVDK 416
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
L +V +GTALVDMY KCG +++A VF+EMP +++L WTA+I AL+G A
Sbjct: 417 HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISY 476
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F EM + G+ P+ +TF+G+LSAC H GLV++GR F M Y + P + HY+C++D+L
Sbjct: 477 FSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLG 536
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAG EAE LIRSMP EPD VWGAL G ++HGNV +GE+ A L++LDP + YV
Sbjct: 537 RAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVL 596
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
L +MY A ++ +K R +M+ERG+ K PGCSS+E++G+V++F ++ E++
Sbjct: 597 LANMYGDANMWEQARKVRKMMEERGVEK-TPGCSSIEMNGLVYDFIIRDKSHPQSEKIYE 655
Query: 542 ILNGLSK 548
L L++
Sbjct: 656 CLTRLTR 662
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 228/453 (50%), Gaps = 35/453 (7%)
Query: 18 KVSPPNKESTKLILRN-----AIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFF 72
K P N ++ +++++ ++ C +M ++KEIH Q+I + + +D +L +RL+ F
Sbjct: 39 KDKPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLI--SDGFAL-SRLVAF 95
Query: 73 CALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG 132
CA+S +L Y + ++ +++++N+ IR + N + LY+ ML G
Sbjct: 96 CAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPIN------AVLLYRNMLRKG 149
Query: 133 IS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
+ PD T+P L K C + G V++ G D+FV N++I + ++CG + +A
Sbjct: 150 SAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAA 209
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R LFDE RD+VSWN++I GY+R G D A DL+ +M + N+ + G V
Sbjct: 210 RKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQL 269
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA--IDHGKWVHGYLRRSGLDCDVV 309
E L L +++ S+EEM + +A+ L Y+ I+ K + + + VV
Sbjct: 270 ENLALGRKLH-QSIEEMGLNLTVPLANALMD-MYIKCKNIEAAKILFENMTKK----TVV 323
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
T +V Y K G +E A +F EMP+KD + W A+I F KEA F EM+A
Sbjct: 324 SWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASS 383
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH-----VYHYACMIDILSRAG 424
V P+ +T V LSAC+ G ++ G W M H V+ H V ++D+ ++ G
Sbjct: 384 VAPDKITVVNCLSACSQLGALDVGIW----MHH--YVDKHNLTMNVALGTALVDMYAKCG 437
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+A ++ MP + W A++ G +HG
Sbjct: 438 NIKKAIQVFEEMPGR-NSLTWTAIICGLALHGQ 469
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 309/522 (59%), Gaps = 25/522 (4%)
Query: 30 ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
IL+N C N+ ELK+IH I+K Q++ L+T+++ C + YA +F
Sbjct: 20 ILKN----CPNIVELKKIHAHIVKFSLSQSS---FLVTKMVDVC--NHHAETEYANLLFK 70
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-----TGISPDCLTFPFLL 144
+ + + YN MIRA + N + + +YKQML I PD TFPF++
Sbjct: 71 RVADPNAFLYNAMIRA-----YKHNKVYV-LAITVYKQMLGHSHGENPIFPDKFTFPFVV 124
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
K C + +G V+G V KFG + V+NS++ +++ C + A +F+EM+ RD V
Sbjct: 125 KSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAV 184
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
SWN +I G++R G + A +F M+ + IFSW +I++G+ + G +ALE F+ MQ
Sbjct: 185 SWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVG 244
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
+E PD+I++ SVL ACA LGA++ GKW+H Y ++G ++ + AL++MY KCG +
Sbjct: 245 IE----PDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSI 300
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
+ +F +M ++D ++W+ MI A +G EA + F+EM+ + PN +TFVGLLSAC
Sbjct: 301 DEGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSAC 360
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
AH+GL+ +G F M+ Y +EP V HY C++++L +G +A LI+ MPM+PD +
Sbjct: 361 AHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAI 420
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
WG+LL C+ H N+E+ ++L++L+P + YV L ++YA G++D V + R LM+
Sbjct: 421 WGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRS 480
Query: 505 RGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
+ ++K PGCSS+EVD +V EF+ K + + +L L
Sbjct: 481 KSMKK-TPGCSSIEVDNMVQEFASGDDSKPFSKAIYRVLKLL 521
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/553 (38%), Positives = 325/553 (58%), Gaps = 54/553 (9%)
Query: 23 NKESTKLILRNAIDECK-NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
+K S K IL +C ++ LK+ H I+++ LQ D + + + + +S + L
Sbjct: 29 SKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQ--DSYIAGSLVKSYANVSTNRYL 86
Query: 82 SYATN--VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
S+ ++ VF +++ +++ +N MI+ E N+ K + LY +M+ P+ T
Sbjct: 87 SFESSLRVFDFVRKPNVFLWNCMIKV----CIENNEPF--KAILLYYEMVVAHSRPNKYT 140
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
+P +LK C+ G V+ +VK G+ D + +S I ++ + G + AR + D+
Sbjct: 141 YPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKG 200
Query: 200 NR-DVVSWNAMIIGYLRSGDLDVALDLFR------------------------------- 227
D V WNAMI GYLR G+++ A +LF
Sbjct: 201 GEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFF 260
Query: 228 -RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
MK+R+ SW+++I G++Q G EALE+F +MQ +E ++P K + SVLSACA L
Sbjct: 261 DEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQ----KEKIRPRKFVLPSVLSACANL 316
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
GA+D G+W+H Y +R+ + D V+GT+LVDMY KCG ++ A+ VF++M K+ +W AMI
Sbjct: 317 GALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMI 376
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
A++G ++A D F +M+ + PN +TFVG+L+ACAH GLV+KG F MR Y V
Sbjct: 377 GGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGV 433
Query: 407 EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
EP + HY C++D+L RAGL +EAE+++ S+P EP VWGALLG C+ HGNVELGE+V +
Sbjct: 434 EPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGK 493
Query: 467 YLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD-GVVHE 525
L++L+P N Y L ++YAKAGR+++V + R LMKERGI K PG S +++ G VH+
Sbjct: 494 ILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGI-KTTPGTSIIDLGRGEVHK 552
Query: 526 FSM-KGSPKVVKE 537
F + GS VK+
Sbjct: 553 FIIGDGSHPQVKD 565
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/487 (39%), Positives = 297/487 (60%), Gaps = 18/487 (3%)
Query: 63 HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKC 121
H+ I +L C G L A +F DL ++N +I C ++ +
Sbjct: 193 HNAIIHVLVSC-----GELLAARKLFDESCVRDLVSWNSIINGYVRCGLAD-------EA 240
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
LY +M + PD +T ++ + + +G ++ + + G+ V + N+++ +
Sbjct: 241 FDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDM 300
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
++ C + +A++LF+ M+ + VVSW M+IGY + G L+ A+ LF M ++++ WN++I
Sbjct: 301 YIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALI 360
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
GFVQ R++EAL LF EMQ+SSV PDKIT+ + LSAC+ LGA+D G W+H Y+ +
Sbjct: 361 GGFVQAKRSKEALALFHEMQASSV----APDKITVVNCLSACSQLGALDVGIWMHHYVDK 416
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
L +V +GTALVDMY KCG +++A VF+EMP +++L WTA+I AL+G A
Sbjct: 417 HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISY 476
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F EM + G+ P+ +TF+G+LSAC H GLV++GR F M Y + P + HY+C++D+L
Sbjct: 477 FSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLG 536
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAG EAE LIRSMP EPD VWGAL G ++HGNV +GE+ A L++LDP + YV
Sbjct: 537 RAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVL 596
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
L +MY A ++ +K R +M+ERG+ K PGCSS+E++G+V++F ++ E++
Sbjct: 597 LANMYGDANMWEQARKVRKMMEERGVEK-TPGCSSIEMNGLVYDFIIRDKSHPQSEKIYE 655
Query: 542 ILNGLSK 548
L L++
Sbjct: 656 CLTRLTR 662
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 227/452 (50%), Gaps = 35/452 (7%)
Query: 18 KVSPPNKESTKLILRNA-----IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFF 72
K P N ++ +++++ ++ C +M ++KEIH Q+I + + +D +L +RL+ F
Sbjct: 39 KDKPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLI--SDGFAL-SRLVAF 95
Query: 73 CALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG 132
CA+S +L Y + ++ + +++N+ IR + N + LY+ ML G
Sbjct: 96 CAISEWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPIN------AVLLYRNMLRKG 149
Query: 133 IS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
+ PD T+P L K C + G V++ G D+FV N++I + ++CG + +A
Sbjct: 150 SAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAA 209
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R LFDE RD+VSWN++I GY+R G D A DL+ +M + N+ + G V
Sbjct: 210 RKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQL 269
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA--IDHGKWVHGYLRRSGLDCDVV 309
E L L +++ S+EEM + +A+ L Y+ I+ K + + + VV
Sbjct: 270 ENLALGRKLH-QSIEEMGLNLTVPLANALMD-MYIKCKNIEAAKILFENMTKK----TVV 323
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
T +V Y K G +E A +F EMP+KD + W A+I F KEA F EM+A
Sbjct: 324 SWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASS 383
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH-----VYHYACMIDILSRAG 424
V P+ +T V LSAC+ G ++ G W M H V+ H V ++D+ ++ G
Sbjct: 384 VAPDKITVVNCLSACSQLGALDVGIW----MHH--YVDKHNLTMNVALGTALVDMYAKCG 437
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+A ++ MP + W A++ G +HG
Sbjct: 438 NIKKAIQVFEEMPGR-NSLTWTAIICGLALHG 468
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/467 (39%), Positives = 293/467 (62%), Gaps = 17/467 (3%)
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
H++ IT LL G LS A +VF+ + DL T+N MI + +
Sbjct: 196 HNASITMLL------SCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAI------EA 243
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
+K+YK+M + P+ +T ++ C++ D +G + + + G+ + + N+++ +
Sbjct: 244 IKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDM 303
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
++ CG + +AR+LFD M+ + +VSW M++GY R G LDVA ++ ++ ++++ WN+II
Sbjct: 304 YVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAII 363
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
+G VQ + +EAL LF EMQ ++E PDK+T+ + LSAC+ LGA+D G W+H Y+ R
Sbjct: 364 SGCVQAKQGKEALALFHEMQIRTIE----PDKVTMVNCLSACSQLGALDVGIWIHHYIER 419
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
L DV +GTALVDMY KCG + RA VF+E+P+++ L WTA+I AL+G ++A
Sbjct: 420 HKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSY 479
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F +M G+ P+ +TF+G+LSAC H GLVE+GR F M + V P + HY+CM+D+L
Sbjct: 480 FSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLG 539
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAG EAE L+++MPM D V GAL C+++GNV++GE+ A L+++DP + YV
Sbjct: 540 RAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVL 599
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM 528
L MY++A + + + R LM ++G+ K PGCS VE++G+VHEF +
Sbjct: 600 LASMYSEAKMWKEARSARKLMNDKGVEK-TPGCSLVEINGIVHEFVL 645
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 231/462 (50%), Gaps = 80/462 (17%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + ++ CK++ +LK+I Q++ + ++ S RL+ FCALS S L Y T +
Sbjct: 60 LLSILERCKSLVQLKQIQAQMVSTGLIENGFAAS---RLVAFCALSESKELDYCTRILYR 116
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTK 149
IK +++++N IR E+ D G LYK+ML G + PD T+P LLK C
Sbjct: 117 IKELNVFSWNAAIRGYV----ESGDIEGG--FMLYKRMLLGGTLKPDNHTYPLLLKGCCG 170
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+ +G V G V+KFG D+FV N+ I++ ++CG ++ A +F++ RD+V+WN+M
Sbjct: 171 QYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSM 230
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I TG V+ G A EA+++++EM++ E V
Sbjct: 231 I-------------------------------TGCVKRGLAIEAIKIYKEMEA----EKV 255
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
+P++IT+ ++S+C+ + ++ GK H Y++ GL+ + + AL+DMY KCG + A
Sbjct: 256 RPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARV 315
Query: 330 VFKEMPKKDTLAWTAMISVFALNGY-------------------------------GKEA 358
+F M +K ++WT M+ +A G+ GKEA
Sbjct: 316 LFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEA 375
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC-FVMMRHVYLVEPHVYHYACMI 417
F EM+ + P+ VT V LSAC+ G ++ G W + RH ++ V ++
Sbjct: 376 LALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSID--VALGTALV 433
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
D+ ++ G + A ++ +P + + W A++ G +HGN +
Sbjct: 434 DMYAKCGNIARALQVFEEIP-QRNCLTWTAVICGLALHGNAQ 474
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 185/457 (40%), Positives = 287/457 (62%), Gaps = 13/457 (2%)
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-- 132
LS+ G + A +F DL ++N +I + + + L+L+ +M+
Sbjct: 170 LSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGN------PAEALELFWRMVAEDAV 223
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+ PD +T + C + D +G ++G V GV V + N+++ +++ CG + A+
Sbjct: 224 VRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAK 283
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+F+ + +R VVSW MI+G+ + G +D A +F M +R++F WN+++TG+VQ + +E
Sbjct: 284 SVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKE 343
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
AL LF EMQ +SV PD+IT+ ++L+AC+ LGA++ G WVH Y+ + L V +GT
Sbjct: 344 ALSLFHEMQEASV----VPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGT 399
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
+L+DMY KCG +E+A +FKE+P+K+ L WTAMI A +G+ EA + FR M G +P
Sbjct: 400 SLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKP 459
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
+ +TF+G+LSAC H+GLV++GR F +M Y +E + HY+CMID+L RAG EAE+L
Sbjct: 460 DEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQL 519
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
+ +MPMEPD VWGA+ C+M GN+ LGEK A L+++DP + YV L +MYA+A
Sbjct: 520 VNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMR 579
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMK 529
K R +M+ G+ K VPGCS +E++GVVHEF +K
Sbjct: 580 KKADKVRAMMRHLGVEK-VPGCSCIELNGVVHEFIVK 615
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 201/440 (45%), Gaps = 97/440 (22%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG----KCLKLYKQMLCT 131
S L +A + S + S YN IRA + S+ D H +CL LY+ +L +
Sbjct: 64 SPPSPLRHALALLSSLPAS---AYNAAIRALSL--SDDGDRHGHGVVRRCLPLYRALLRS 118
Query: 132 GIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
G + PD LTFPFLLK C + + G + V++ G+ DVFV N+ G +
Sbjct: 119 GTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMED 178
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
AR LFD RD+VSWN +I GY+R G+ AL+LF RM +
Sbjct: 179 ARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAED----------------- 221
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
+V+PD++T+ + +S C + ++ G+ +HG++ G+ C V +
Sbjct: 222 ----------------AVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRL 265
Query: 311 GTALVDMYGKCGCVERAYGVFK-------------------------------EMPKKDT 339
AL+DMY KCG +E A VF+ EMP++D
Sbjct: 266 MNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDV 325
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
W A+++ + KEA F EM+ V P+ +T V LL+AC+ G +E G W
Sbjct: 326 FPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWV--- 382
Query: 400 MRHVYLVEPH--VYHYA---CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
H Y +E H V+ A +ID+ ++ G +A + + +P E + W A++ G
Sbjct: 383 --HRY-IEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIP-EKNALTWTAMICGLAN 438
Query: 455 HGN-----------VELGEK 463
HG+ +ELG+K
Sbjct: 439 HGHANEAIEHFRTMIELGQK 458
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 194/480 (40%), Positives = 299/480 (62%), Gaps = 21/480 (4%)
Query: 81 LSYATNVFSHIKRSDL--YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
++YA +F HI+ L + +NI+IRA + + HS + +Y +M +SPD
Sbjct: 8 IAYANPIF-HIRHLKLESFLWNIIIRA-IVHNVSSPQRHSP--ISVYLRMRNHRVSPDFH 63
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TFPFLL L +G + Q++ FG+ D FV+ S+++++ +CG + SA+ +FD+
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
++D+ +WN+++ Y ++G +D A LF M +RN+ SW+ +I G+V G+ +EAL+LF+
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFR 183
Query: 259 EMQ-SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
EMQ E V+P++ T+++VLSAC LGA++ GKWVH Y+ + ++ D+V+GTAL+DM
Sbjct: 184 EMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDM 243
Query: 318 YGKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREME-AEGVRPNHV 375
Y KCG +ERA VF + KKD A++AMI A+ G E F F EM ++ + PN V
Sbjct: 244 YAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSV 303
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
TFVG+L AC H GL+ +G+ F MM + + P + HY CM+D+ R+GL EAE I S
Sbjct: 304 TFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIAS 363
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MPMEPDV +WG+LL G +M G+++ E + LI+LDP+N YV L ++YAK GR+ +
Sbjct: 364 MPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME- 422
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
GI K VPGCS VEV+GVVHEF + + E + +L+ + + ++ G+
Sbjct: 423 ----------GINK-VPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGY 471
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 182/424 (42%), Positives = 274/424 (64%), Gaps = 5/424 (1%)
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+ PD T F+LK C K D + G +++G K G ++F+QN +++L+ CG + A
Sbjct: 6 VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+LF++M RD V+WN +I + GD+D A F RM +N+ SW S+I+GFVQ G+ E
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
A++LF +++ +E V+P+++T+ SVL+ACA LG +D G+ VH Y +SG +V +
Sbjct: 126 AIDLFMKLE----DEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCN 181
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
L+DMY KCGC+E A VF EM ++ ++W+AMI+ A++G +EA F EM GV+P
Sbjct: 182 TLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKP 241
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
N VTF+GLL AC+H GL+++GR F M Y V P + HY C++D+ SRAGL EA
Sbjct: 242 NGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEF 301
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
I SMP++P+ VWGALLGGC++H N++L E+ ++L +LDPLN +YV + ++YA+A R+
Sbjct: 302 ILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERW 361
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
+D + R LMK+RG++K G SS+ V+GVVHEF E++ I + L MK
Sbjct: 362 EDAARVRKLMKDRGVKK-TSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKR 420
Query: 553 GGFG 556
G+
Sbjct: 421 RGYA 424
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 43/283 (15%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
+T + L+ G + A F + ++ ++ MI + + + N+ + L+
Sbjct: 77 VTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMI-SGFVQCGKPNEA-----IDLF 130
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
++ + P+ +T +L C D +G V+ K G +V V N++I +++ C
Sbjct: 131 MKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKC 190
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
G + +AR +F EM R VVSW+AMI G
Sbjct: 191 GCLENARRVFYEMEERTVVSWSAMIAG-------------------------------LA 219
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GL 304
G+A EAL LF EM ++ VKP+ +T +L AC+++G ID G+ + G+
Sbjct: 220 MHGQAEEALCLFSEM----IKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGV 275
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
+ +VD++ + G +E A+ MP K + + W A++
Sbjct: 276 IPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALL 318
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 211/588 (35%), Positives = 322/588 (54%), Gaps = 79/588 (13%)
Query: 34 AIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR 93
++++C M +LK+IH Q++++ CL + + ++++ FCAL SGSL YA VF+ I
Sbjct: 46 SLEKCTTMSQLKQIHAQMLRT-CLFVDPFSA--SKIVAFCALHDSGSLPYARLVFNQIPN 102
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+T N +IR TN + + Y+ M+ G+ PD TFP L K C +G
Sbjct: 103 PTTFTCNSIIRGY------TNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCEG 156
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
++ K G D ++QN++++++ CG + SAR +FD+M N+ VVSW MI Y
Sbjct: 157 ---KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAY 213
Query: 214 LRSGDLDVALDLFRRMK----KRNIFSWNSIITG-------------------------- 243
+ A+ LFRRM+ K N + +++T
Sbjct: 214 AQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHT 273
Query: 244 ---------FVQGGRAREALELFQEM----------------QSSSVEEMV--------- 269
+ + G A +LF +M + S EE +
Sbjct: 274 VLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 333
Query: 270 --KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
K DK+T+AS+L AC +LGA++ GKW+H Y+ + ++ DV +GTALVDMY KCG +E A
Sbjct: 334 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 393
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF+EMP+KD + WTA+I A+ G G +A + F EM+ V+P+ +TFVG+L+AC+H+
Sbjct: 394 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 453
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GLV +G F M + Y ++P + HY CM+D+L RAG +EAE LI++MPM PD FV
Sbjct: 454 GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVG 513
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
LL C++HGN+ + E+ AQ LI+LDP N YV L ++Y+ ++ KK R LM ER I
Sbjct: 514 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 573
Query: 508 RKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+K PGCS++EV GVVHEF E+ L+ + + +K+ G+
Sbjct: 574 KKP-PGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGY 620
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/556 (36%), Positives = 313/556 (56%), Gaps = 51/556 (9%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P+++ + R+ C + LK+IH +I N + S + L++ ++++SG++
Sbjct: 11 PSRQQRSQLWRS----CTTIGTLKQIHASMIVK---GFNSNTSALRELIYASSIAISGTM 63
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
+YA +F HI D + +N MIR +A S N + LY QM + PD TFP
Sbjct: 64 AYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLN------AISLYSQMENGCVRPDKFTFP 117
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT------------ 189
F+LK CT+ +G V+G+V + G + FV+N++I CG +
Sbjct: 118 FVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKR 177
Query: 190 -------------------SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
AR LFDEM +D+VSWN MI GY + G+++ A LF +
Sbjct: 178 DVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVP 237
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
KR++ +WN++I G+V G ++ALE+F+EM+ SV E+ PD++T+ S+LSAC LG +D
Sbjct: 238 KRDVVTWNAMIAGYVLCGSNQQALEMFEEMR--SVGEL--PDEVTMLSLLSACTDLGDLD 293
Query: 291 HGKWVHGYLRRSGL-DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
G+ +H + G D V++G AL+DMY KCG + RA VF+ M +KD W +++
Sbjct: 294 AGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGL 353
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A +G+ +++ F EM +RP+ +TFVG+L AC+H+G VE+GR F +MR Y +EP+
Sbjct: 354 AFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPN 413
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI 469
+ HY CM+D+L RAGL +EA I +M +EP+ VW LLG C++HGNVELG + L+
Sbjct: 414 IRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLL 473
Query: 470 DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG-VVHEFSM 528
+ YV L ++YA G +D V+K R LM + G+RKE GCS +E D + F
Sbjct: 474 KMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEA-GCSLIEGDNKALMHFLF 532
Query: 529 KGSPKVVKEELVLILN 544
PK+ + L L+
Sbjct: 533 DSKPKLNSRKPFLELH 548
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 192/479 (40%), Positives = 298/479 (62%), Gaps = 13/479 (2%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG--I 133
SVSGS+ A +F D+ ++N +I +S + L+L+ +++ G +
Sbjct: 167 SVSGSMVLARRLFDESPARDVVSWNTLI-GGYVRSGLPREA-----LELFWRLVEDGKAV 220
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
PD +T + C + D +G ++ V GV V + N+V+ +++ CG + A+
Sbjct: 221 RPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKS 280
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
+F+ + N+ VVSW MI+G+ R G ++ A LF M +R++F WN+++ G+VQ + +EA
Sbjct: 281 VFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEA 340
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
+ LF EMQ S V+ P++IT+ ++LSAC+ LGA++ G WVH Y+ R L V +GT+
Sbjct: 341 IALFHEMQESKVD----PNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTS 396
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
LVDMY KCG +++A +FKE+P K+ L WTAMI A +G+ EA + F+ M G++P+
Sbjct: 397 LVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPD 456
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
+TF+G+LSAC H+GLV++GR F +M Y +E + HY+CMID+L RAG EAE+L+
Sbjct: 457 EITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLV 516
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
+MPM+PD VWGAL C+MHGN+ LGEK A L++LDP + YV L +MYA+A
Sbjct: 517 NTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRK 576
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
K R +M+ G+ K VPGCS +E++GVVHEF +K + + L+G++ MK+
Sbjct: 577 KADKVRVMMRHLGVEK-VPGCSCIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMKH 634
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 139/444 (31%), Positives = 212/444 (47%), Gaps = 78/444 (17%)
Query: 99 YNIMIRA-NACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVG 156
YN RA + C D H CL LY+ +LC+ + PD LTFPFLLK C + G
Sbjct: 84 YNAAFRALSLCPHRHLVDRH---CLPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYG 140
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
A+V G V K G DVFV N+ + + G + AR LFDE RDVVSWN +I GY+RS
Sbjct: 141 AAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRS 200
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G AL+LF R+ V+ G+A V+PD++T+
Sbjct: 201 GLPREALELFWRL---------------VEDGKA------------------VRPDEVTM 227
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK---- 332
+S CA +G ++ GK +H ++ G+ C V + A++DMY KCG +E A VF+
Sbjct: 228 IGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDN 287
Query: 333 ---------------------------EMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
EMP++D W A+++ + N GKEA F EM
Sbjct: 288 KTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEM 347
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWC--FVMMRHVYLVEPHVYHYACMIDILSRA 423
+ V PN +T V LLSAC+ G +E G W ++ +YL V ++D+ ++
Sbjct: 348 QESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYL---SVALGTSLVDMYAKC 404
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID--LDPLNHAFYVN 481
G +A + + +P + + W A++ G HG+ + + Q +ID L P + ++
Sbjct: 405 GNIKKAICIFKEIP-DKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQP-DEITFIG 462
Query: 482 LCDMYAKAGRFDDVKKTRNLMKER 505
+ AG + ++ +LM E+
Sbjct: 463 VLSACCHAGLVKEGRQFFSLMHEK 486
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/536 (36%), Positives = 316/536 (58%), Gaps = 17/536 (3%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PNK + ++++ A+ E + K +H IK+ D ++ L+ F A G L
Sbjct: 238 PNKFTFPVLIK-AVAERRCFLVGKAVHGMAIKT---SFGDDVFVLNSLIHFYA--SCGHL 291
Query: 82 SYATNVFSHIK--RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
A VF I+ D+ ++N M+ + + K L L+++M G+ P+ +T
Sbjct: 292 DLAYLVFEMIEGNNKDIVSWNSMV------TGFVQGGYPDKALDLFERMRNEGVHPNAVT 345
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
++ C K ++ +G V + + + ++ V N+ I +F+ CG V AR LFD M
Sbjct: 346 MVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNME 405
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
RDVVSW +I GY + + +A D+F M +++I +WN +I+G+ Q GR +EAL +F+E
Sbjct: 406 KRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRE 465
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
+Q + + +PD++T+ S LSACA LGA+D G+W+HGY+++ + + + T+L+DMY
Sbjct: 466 LQLT--KSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYS 523
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
K G VE+A VF + KD W+AMI+ A++G G+ A + F +M+ V+PN VTF
Sbjct: 524 KSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTN 583
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
LL AC+HSGLV++G+ F M VY V P HY+CM+D+L RAG EA + I MP+
Sbjct: 584 LLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLA 643
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
P VWGALLG C +HGN+EL EK L++++P NH YV L ++YAK G ++ V + R
Sbjct: 644 PSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELR 703
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
M++ G++KE GCSS+E+DG VHEF + + + ++ L+ + +++ G+
Sbjct: 704 QQMRDSGLKKET-GCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGY 758
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 156/529 (29%), Positives = 246/529 (46%), Gaps = 99/529 (18%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHS--LITRLLFFCALSV 77
+P + +T + R +C + ++LK+IH Q+ L+TN H + L A S
Sbjct: 131 TPASATATNVGDRALFQQCTSFKQLKQIHAQM-----LRTNKLHDPYAASELFTAAAFSS 185
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+L YA VF I + +LY++NI+IRA A S L + + + P+
Sbjct: 186 FSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSV-----LVFIRMLHDSPFGPNK 240
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD- 196
TFP L+K +R LVG +V+G +K DDVFV NS+I + +CG + A ++F+
Sbjct: 241 FTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEM 300
Query: 197 -EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
E +N+D+VSWN+M+ G+++ G D ALDLF RM+
Sbjct: 301 IEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRN------------------------ 336
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
E V P+ +T+ SV+SACA + G+ V Y+ R+ + ++ + A +
Sbjct: 337 -----------EGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATI 385
Query: 316 DMYGKCGCVERAYG-------------------------------VFKEMPKKDTLAWTA 344
DM+ KCG VE A G +F MP+KD AW
Sbjct: 386 DMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNV 445
Query: 345 MISVFALNGYGKEAFDTFREME--AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
+IS + +G KEA FRE++ G RP+ VT + LSACA G ++ G W H
Sbjct: 446 LISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWI-----H 500
Query: 403 VYLVEPHVY----HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
Y+ + + +ID+ S++G +A + S+ DVFVW A++ G MHG
Sbjct: 501 GYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAMIAGLAMHGR- 558
Query: 459 ELGEKVAQYLIDLDPL----NHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
GE + +D+ N + NL + +G D+ K+ + M+
Sbjct: 559 --GEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEME 605
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/526 (37%), Positives = 316/526 (60%), Gaps = 20/526 (3%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
N+ E K+++ ++ + + +N S+I +LF G++ A +F+ +K+ DL ++
Sbjct: 207 NVEEAKDVYDRMPERNVIASN---SMI--VLF----GKKGNVEEACKLFNEMKQKDLVSW 257
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
+ +I +C E N+ + + L L+K+M GI D + +L C++ L + G V
Sbjct: 258 SALI---SC--YEQNEMYE-EALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLV 311
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+G VVK G+ V +QN++I ++ +C V +A+ LF E D +SWN+MI GY++ G++
Sbjct: 312 HGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEI 371
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
+ A LF M ++ SW+++I+G+ Q R E L LFQEMQ E KPD+ + SV
Sbjct: 372 EKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQI----EGTKPDETILVSV 427
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
+SAC +L A+D GKW+H Y+R++GL ++++GT L++MY K GCVE A VFK + +K
Sbjct: 428 ISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGV 487
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
W A+I A+NG ++ TF EM+ GV PN +TFV +L AC H GLV++G F
Sbjct: 488 STWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNS 547
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + + P++ HY CM+D+L RAG+ EAE LI SMPM PDV WGALLG C+ +G+ E
Sbjct: 548 MIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNE 607
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
GE++ + L++L P + F V L ++YA G + DV + R +M++ G+ K PGCS +E
Sbjct: 608 TGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVK-TPGCSMIEA 666
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSME 565
G VHEF E + +L+ ++K +K G+ R +S++
Sbjct: 667 HGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLD 712
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 256/516 (49%), Gaps = 73/516 (14%)
Query: 4 KLQMVSYSLLNSPAKVSPPNKESTKL--ILRNAIDECKNMRELKEIHTQIIKSPCLQTND 61
KL ++Y L+ P K+ + T IL + +C+N+++ +I +Q+I S + +
Sbjct: 2 KLSRLNY--LSKPFKIPTFTLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSF 59
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
S RLL F +++ + +FSHI+ + + N M++ ++S K
Sbjct: 60 AAS---RLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPC------KA 110
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
+ +YK ML + ++ D T+P L + C+ RL G + V+K G DV++QN++I++
Sbjct: 111 IWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINM 170
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG ++ AR +FD S D+VSWN+M+ GY+ G+++ A D++ RM +RN+ + NS+I
Sbjct: 171 YAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMI 230
Query: 242 TGFVQGGRAREALELFQEMQSSSV-----------------------EEM----VKPDKI 274
F + G EA +LF EM+ + +EM + D++
Sbjct: 231 VLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEV 290
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG--------------- 319
+ SVLSAC+ L + GK VHG + + G++ V + AL+ MY
Sbjct: 291 VVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSES 350
Query: 320 ----------------KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
KCG +E+A +F MP KD ++W+AMIS +A E F+
Sbjct: 351 CCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQ 410
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
EM+ EG +P+ V ++SAC H +++G+W +R L + ++ +I++ +
Sbjct: 411 EMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGL-KINIILGTTLINMYMKL 469
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
G +A + + + E V W AL+ G M+G V+
Sbjct: 470 GCVEDALEVFKGLE-EKGVSTWNALILGLAMNGLVD 504
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/488 (40%), Positives = 302/488 (61%), Gaps = 15/488 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG-SLSYATNVFSHIKR 93
+D+C+ + ++K+I T + S L+ D ++ +++ FCALS + SLS+A +F ++
Sbjct: 17 LDKCRTISQIKQIQTHLTVSGTLK--DPYA-AAKIISFCALSSNQFSLSHAYRLFLGLRH 73
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+ +N +IRA A E N+ K + L+K ML + P+ T+ FL K CT +
Sbjct: 74 RSTFIWNTVIRAFA----EKNEPR--KAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNNL 127
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
+G + + Q +K G FVQN ++ +F G + SAR LFD SNRDV++W A+I GY
Sbjct: 128 YLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGY 187
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
+R+G + + +LF +M +RN SW+++ITG+V+ G EALELF M S P+
Sbjct: 188 VRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFW----PNH 243
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
I ++ACA LGA+D G+W+H Y++R+ +D D V+G AL+DMY KCGC+E A +F E
Sbjct: 244 AGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGE 303
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
+ +D +T +IS A +G A + F M +EGV PN VTFV +L+AC+ GLV+KG
Sbjct: 304 LRNRDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKG 363
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
F M +Y EP V HY C++D+L RAG EA++L++ MPM+PD +V GALL +
Sbjct: 364 LRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNASR 423
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
++G+VELGE+ + L L + +V L +MYA A ++D+V + R M ++ +RK VPG
Sbjct: 424 VYGDVELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKVRK-VPG 482
Query: 514 CSSVEVDG 521
CS ++VDG
Sbjct: 483 CSLIKVDG 490
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 202/575 (35%), Positives = 322/575 (56%), Gaps = 56/575 (9%)
Query: 18 KVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV 77
K SP + T +L +D +++ L+ +H++II S L+ N SL +L+ A +
Sbjct: 36 KNSP---KETAFMLGQVLDTYPDLKTLRTVHSRII-SEDLRYNS--SLGVKLMR--AYAS 87
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
++ A VF I ++ N+MIR S N+ + ++++ M + PD
Sbjct: 88 LKDVATARKVFDEIPERNVIIINVMIR------SYVNNGFYREGIQVFGTMCSCHVKPDH 141
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
TFP +LK C+ + ++G ++G K G+ +FV N ++S++ CGF++ AR++ DE
Sbjct: 142 YTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE 201
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVAL---------------------------------- 223
MS RDVVSWN+++ GY ++ D AL
Sbjct: 202 MSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVM 261
Query: 224 ---DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
D+F +M K+++ SWN +I +++ EA+EL+ M++ E PD ++I SVL
Sbjct: 262 YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFE----PDAVSITSVL 317
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
AC A+ GK +HGY+ R L ++++ AL+DMY KCGC++RA VF+ M +D +
Sbjct: 318 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVV 377
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+WTAMIS + +G G +A F +M+ G+ P+ + FV L+AC+H+GL+E+GR CF +M
Sbjct: 378 SWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 437
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
Y + P + H ACM+D+L RAG EA + I+ MPMEP+ VWGALLG C++H N ++
Sbjct: 438 TDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDI 497
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
G A L L P +YV L ++YAKAGR+++V RN+MK +G++K PG S+VEV+
Sbjct: 498 GLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN-PGASNVEVN 556
Query: 521 GVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++H F + E+ L+ L K MK G+
Sbjct: 557 RIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGY 591
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/458 (41%), Positives = 291/458 (63%), Gaps = 16/458 (3%)
Query: 75 LSVSGSLSYATNVF--SHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG 132
L+V S++ A +F SH++ DL ++N +I + + L+++ +M+ G
Sbjct: 165 LAVCSSMAEARKLFDGSHVR--DLVSWNTLIGGYVRRGVPR------EALEMFWRMVGDG 216
Query: 133 -ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
++PD +T ++ + D +G ++G V GV V + N V+ +++ CG + A
Sbjct: 217 AVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERA 276
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
+ +F+ + + +VSW MI+GY + G +D A +F M +R++F WN+++TG+VQ R +
Sbjct: 277 KSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGK 336
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EAL LF +MQ E MV+PD IT+ ++LSAC+ LGA++ G WVH Y+ R + V++G
Sbjct: 337 EALRLFHDMQ----EAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLG 392
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
T LVDMY KCG +E+A VFKE+P+K+ L WTAMIS A +G+ A F+ M G++
Sbjct: 393 TNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQ 452
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ +TF+G+LSAC H+GLV++G+ F +M Y +E + HY+CM+D+L RAG EAE
Sbjct: 453 PDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEH 512
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
L+ +MPMEPD VWGAL C+MHGN+ LGEK A L++LDP + YV L +MYA+A
Sbjct: 513 LVNTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANM 572
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMK 529
K R +M+ G+ K VPGCS +E++GVVHEF +K
Sbjct: 573 RKKADKVRVMMRHLGVEK-VPGCSCIELNGVVHEFIVK 609
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 188/406 (46%), Gaps = 75/406 (18%)
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
YN +RA S T+ +CL LY +L + PD LTFPFLLK C + + G +
Sbjct: 86 YNAALRA---LSLCTDRGLVTRCLPLYCSLLRSA-RPDHLTFPFLLKACARLQERNYGNA 141
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
V G V+ G DVFV N+ + C + AR LFD RD+VSWN +I GY+R
Sbjct: 142 VLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRR-- 199
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
G REALE+F M V PD++T+
Sbjct: 200 -----------------------------GVPREALEMFWRMVGDGA---VTPDEVTMIG 227
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK------ 332
V+S A L ++ G+ +HGY+ G+ C V + ++DMY KCG +ERA VF+
Sbjct: 228 VVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKT 287
Query: 333 -------------------------EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
EMP++D W A+++ + GKEA F +M+
Sbjct: 288 IVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQE 347
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWC--FVMMRHVYLVEPHVYHYACMIDILSRAGL 425
V P+ +T V LLSAC+ G +E G W ++ R V L V ++D+ S+ G
Sbjct: 348 AMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSL---SVMLGTNLVDMYSKCGN 404
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
+A R+ + +P E + W A++ G HG+ ++ K Q +I+L
Sbjct: 405 IEKAIRVFKEIP-EKNALTWTAMISGLANHGHADVAIKYFQRMIEL 449
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 191/521 (36%), Positives = 303/521 (58%), Gaps = 20/521 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
ID+ K++ L +IH +++ +H+ I + + G L + VF+
Sbjct: 54 IDKSKSVAHLLQIHASLLRRGL-----YHNPILNFKLQRSYAALGRLDCSVFVFNTFDEP 108
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
++++++ +I ++ S D + Y QML G+ P+ TF +LK C+
Sbjct: 109 NVFSFSAIIHSHV--QSRLFD----RAFGYYSQMLSCGVEPNAFTFSSVLKSCSLE---- 158
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G ++ Q +K G+ D++V+ ++ ++ G V AR LFD+M R +VS M+ Y
Sbjct: 159 SGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYS 218
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+ G+LD A LF MK+R++ WN +I G+ Q G E+L+LF+ M + P+++
Sbjct: 219 KMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKA----IPNEV 274
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ +VLSAC LGA++ G+W+H Y+ G+ +V +GTAL+DMY KCG +E A VF +
Sbjct: 275 TVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRI 334
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
KD +AW +MI +A++G+ + A F EM G +P +TF+G+LSAC H GLVE+GR
Sbjct: 335 RDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGR 394
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F +MR Y +EP + HY CM+++L RAG EA L+++M + D +WG LLG C++
Sbjct: 395 SFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRL 454
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
H N++LGE++A++L+D N YV L +MYA G ++ V K R LMKE GI KE GC
Sbjct: 455 HVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKE-HGC 513
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
SS+EVD VHEF +E+ ++LN ++ +K G+
Sbjct: 514 SSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGY 554
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 199/568 (35%), Positives = 319/568 (56%), Gaps = 53/568 (9%)
Query: 25 ESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYA 84
+ T +L +D ++R L+ +H++II L+ N SL +L+ A + ++ A
Sbjct: 39 QETVFLLGQVLDTYPDIRTLRTVHSRIILED-LRCNS--SLGVKLMR--AYASLKDVASA 93
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
VF I ++ N+MIR S N+ G+ +K++ M + PD TFP +L
Sbjct: 94 RKVFDEIPERNVIIINVMIR------SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
K C+ ++G ++G K G+ +FV N ++S++ CGF++ AR++ DEMS RDVV
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 205 SWNAMIIGYLRSGDLDVAL-------------------------------------DLFR 227
SWN++++GY ++ D AL D+F
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFF 267
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG 287
+M K+++ SWN +I +++ EA+EL+ M++ E PD ++I SVL AC
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFE----PDAVSITSVLPACGDTS 323
Query: 288 AIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMIS 347
A+ GK +HGY+ R L ++++ AL+DMY KCGC+E+A VF+ M +D ++WTAMIS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 348 VFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
+ +G G +A F +++ G+ P+ + FV L+AC+H+GL+E+GR CF +M Y +
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY 467
P + H ACM+D+L RAG EA R I+ M MEP+ VWGALLG C++H + ++G A
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 468 LIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFS 527
L L P +YV L ++YAKAGR+++V RN+MK +G++K PG S+VEV+ ++H F
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN-PGASNVEVNRIIHTFL 562
Query: 528 MKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ +E+ L+ L K MK G+
Sbjct: 563 VGDRSHPQSDEIYRELDVLVKKMKELGY 590
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 199/568 (35%), Positives = 319/568 (56%), Gaps = 53/568 (9%)
Query: 25 ESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYA 84
+ T +L +D ++R L+ +H++II L+ N SL +L+ A + ++ A
Sbjct: 39 QETVFLLGQVLDTYPDIRTLRTVHSRIILED-LRCNS--SLGVKLMR--AYASLKDVASA 93
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
VF I ++ N+MIR S N+ G+ +K++ M + PD TFP +L
Sbjct: 94 RKVFDEIPERNVIIINVMIR------SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
K C+ ++G ++G K G+ +FV N ++S++ CGF++ AR++ DEMS RDVV
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 205 SWNAMIIGYLRSGDLDVAL-------------------------------------DLFR 227
SWN++++GY ++ D AL D+F
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFF 267
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG 287
+M K+++ SWN +I +++ EA+EL+ M++ E PD ++I SVL AC
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFE----PDAVSITSVLPACGDTS 323
Query: 288 AIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMIS 347
A+ GK +HGY+ R L ++++ AL+DMY KCGC+E+A VF+ M +D ++WTAMIS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 348 VFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
+ +G G +A F +++ G+ P+ + FV L+AC+H+GL+E+GR CF +M Y +
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY 467
P + H ACM+D+L RAG EA R I+ M MEP+ VWGALLG C++H + ++G A
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 468 LIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFS 527
L L P +YV L ++YAKAGR+++V RN+MK +G++K PG S+VEV+ ++H F
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN-PGASNVEVNRIIHTFL 562
Query: 528 MKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ +E+ L+ L K MK G+
Sbjct: 563 VGDRSHPQSDEIYRELDVLVKKMKELGY 590
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 194/523 (37%), Positives = 314/523 (60%), Gaps = 17/523 (3%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + +D+CK++ ELK++H +I Q + I+++L F ALS SG ++Y+ VFS
Sbjct: 17 LLSLLDKCKSILELKQLHAVVISCGLSQDD---PFISKILCFSALSNSGDINYSYRVFSQ 73
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
+ ++++N +IR +N + + L ++ +ML G++PD LT+PFL+K +
Sbjct: 74 LSSPTIFSWNTIIRGY------SNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARL 127
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
L+ G SV+ ++K G D F+QNS+I ++ ACG A+ +FD + ++VVSWN+M+
Sbjct: 128 LNQETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWNSML 187
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY + G++ +A F M ++++ SW+S+I G+V+ G EA+ +F++MQS+ K
Sbjct: 188 DGYAKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAG----PK 243
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
+++T+ SV ACA++GA++ G+ ++ Y+ +GL +V+ T+LVDMY KCG +E A +
Sbjct: 244 ANEVTMVSVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLI 303
Query: 331 FKEMPKK--DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
F+ + K D L W A+I A +G +E+ F+EM+ G+ P+ VT++ LL+ACAH G
Sbjct: 304 FRRVSKSQTDVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGG 363
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
LV++ W F + P HYACM+D+L+RAG + A + I MP EP + GAL
Sbjct: 364 LVKEA-WFFFESLSKCGMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGAL 422
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
L GC H N+ L E V + LI+L+P + Y+ L +MYA R+DD + R M+ RG++
Sbjct: 423 LSGCINHRNLALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRGVK 482
Query: 509 KEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
K PG S VE+ GV+H F EE +LN + MK
Sbjct: 483 KS-PGFSFVEISGVLHRFIAHDKTHPDSEETYFMLNFVVYQMK 524
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 191/489 (39%), Positives = 297/489 (60%), Gaps = 15/489 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F+ + D+ +++ +I E N + + L ++ +M G+ D +
Sbjct: 252 GQVMEAWKLFNEMDEKDMVSWSALISG-----YEQNGMYE-EALVMFIEMNANGMRLDEV 305
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+L C G ++G V++ G+ V +QN++I ++ G + A+ LF+
Sbjct: 306 VVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGS 365
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
N D +SWN+MI G ++ G ++ A LF M +++I SW+++I+G+ Q E L LF
Sbjct: 366 HNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFH 425
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ + +PD+ + SV+SAC +L A+D GKWVH Y+R++GL +V++GT L+DMY
Sbjct: 426 EMQLGQI----RPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMY 481
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCGCVE A VF M +K +W A+I A+NG + + D F EM+ GV PN +TF+
Sbjct: 482 MKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFM 541
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L AC H GLV++GR F M + +EP+V HY CM+D+L RAGL +EAE+LI SMPM
Sbjct: 542 GVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPM 601
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
PDV WGALLG C+ HG+ E+GE+V + LI+L P + F+V L +++A G ++DV +
Sbjct: 602 APDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEV 661
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF--SMKGSPKVVKEELVLILNGLSKIMKNGGFG 556
R +MK++G+ K PGCS +E +GVVHEF K P + K E +LN ++K +K G+
Sbjct: 662 RGMMKQQGVVK-TPGCSLIEANGVVHEFLAGDKTHPWINKVE--GMLNEMAKRLKMEGYA 718
Query: 557 QYIRGLSME 565
+S++
Sbjct: 719 PDTNEVSLD 727
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 250/519 (48%), Gaps = 79/519 (15%)
Query: 4 KLQMVSYSLLNSPAKVSPPNKESTKL-ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH 62
KL +S S L S P K + L IL + C N+++ I +Q+I + +
Sbjct: 17 KLNQLS-SALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFA 75
Query: 63 HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
S RLL F S L Y+ +F I+ S+ + +N M+RA +S + K L
Sbjct: 76 AS---RLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNS------AEKAL 126
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
LYK M+ + PD T+P +++ C RL G ++ V+K G DV+VQN++I+++
Sbjct: 127 LLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMY 186
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI-------- 234
CG + AR LFDE D VSWN+++ GY++ GD++ A +F +M +RNI
Sbjct: 187 AVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIV 246
Query: 235 -----------------------FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
SW+++I+G+ Q G EAL +F EM ++ ++
Sbjct: 247 LLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANG----MRL 302
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG------------ 319
D++ + SVLSACA+L + GK +HG + R G++ V + AL+ MY
Sbjct: 303 DEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLF 362
Query: 320 -------------------KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
KCG VE+A +F MP+KD ++W+A+IS +A + E
Sbjct: 363 NGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLA 422
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F EM+ +RP+ V ++SAC H +++G+W +R L + +V ++D+
Sbjct: 423 LFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGL-KVNVILGTTLLDMY 481
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ G A + M E V W AL+ G ++G VE
Sbjct: 482 MKCGCVENALEVFNGME-EKGVSSWNALIIGLAVNGLVE 519
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 175/449 (38%), Positives = 280/449 (62%), Gaps = 11/449 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
S + A +F + L ++ M+ S + + L+L++QM + PD
Sbjct: 315 SNKIDKARQLFDKMNERSLVSWTTMM------SGYVQGGYYCESLELFQQMRFENVIPDE 368
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+ +L C D +G SV+ +V +G+ D F+ N+++ L+ CG + A F++
Sbjct: 369 VALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQ 428
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ + SWN+M+ G+ RSG +D A D F ++ +++I SWN+++ +V+ E+ E+F
Sbjct: 429 LPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIF 488
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+MQSS+V KPDK T+ S+LS+CA +GA++HG WV+ Y+ ++ + D ++GTAL+DM
Sbjct: 489 CKMQSSNV----KPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDM 544
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
YGKCGCVE AY +F ++ +K+ WTAM++ +A+ G EA D + EME GV+P+HVTF
Sbjct: 545 YGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTF 604
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+ LL+AC+H GLV++G F +R Y + P ++HY CM+D+L R G E + I MP
Sbjct: 605 IALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMP 664
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+EPDV +W +L+ C+ H NVEL E+ + LI++DP N+ +V L ++YA AGR+DDV K
Sbjct: 665 IEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSK 724
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R + E G+ K+ PG + +E +GVVHEF
Sbjct: 725 VRTKLHETGVPKQ-PGFTMIEQNGVVHEF 752
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 136/524 (25%), Positives = 234/524 (44%), Gaps = 99/524 (18%)
Query: 15 SPAKVSPP--NKESTKLILR-----NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLIT 67
SP+ PP N +++ +LR + + C N+RE IH +I + + H IT
Sbjct: 15 SPSIHKPPTLNPKTSHSVLRPHWIIDLLKSCSNIREFSPIHAHLITANLI----HDPEIT 70
Query: 68 RLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQ 127
+ LSV+ +L A + S+ + +N ++ ++ + + L+ Y
Sbjct: 71 SQVLAFLLSVN-NLDCAHQILSYSHEPESIIWNTLLE------NKLKEGCPQEVLECYYH 123
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
M+ G+ D TF FL+ C K D +G+ V+G+++K G + + N+++ L+ CG
Sbjct: 124 MVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGK 183
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+ LF++M++RDV+SWN MI Y+ G ++R
Sbjct: 184 LKEVCQLFEKMTHRDVISWNTMISCYVLKG-------MYR-------------------- 216
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY-------LR 300
EAL+LF EM S V PD+IT+ S++S CA L ++ GK +H Y +R
Sbjct: 217 ----EALDLFDEMLVSG----VLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIR 268
Query: 301 RSGLDC--------------------------DVVIGTALVDMYGKCGCVERAYGVFKEM 334
S L+C DVV+ T LV Y K +++A +F +M
Sbjct: 269 GSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKM 328
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
++ ++WT M+S + GY E+ + F++M E V P+ V V +LSAC H + GR
Sbjct: 329 NERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGR 388
Query: 395 WCFVMMRHVYLVEPHV----YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
H ++V + + ++D+ ++ G EA R +P + W ++L
Sbjct: 389 -----SVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAA-SWNSMLD 442
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
G G V+ + + D ++ VN Y K F++
Sbjct: 443 GFCRSGGVDKARDFFNKIPEKDIVSWNTMVN---AYVKHDLFNE 483
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 195/518 (37%), Positives = 305/518 (58%), Gaps = 19/518 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +C NM +LK+ H Q++KS +N +++RLL FCA S +GSLS+A +F HI+
Sbjct: 12 LHKCINMNQLKQAHAQVLKSGLHNSN---FVLSRLLNFCAESRNGSLSHAFKLFQHIQHP 68
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ +N MI+A + N + ++ + GI PD T P++LK + +
Sbjct: 69 TICIFNTMIKALLLRGEFLN------AIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIH 122
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G S++ +K G + FV NS++ ++ + + SAR +FDEM VSW MI GY
Sbjct: 123 LGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYA 182
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
GD+D A +LF ++ W ++I+G+VQ +E L +F+ MQ + VE PD+
Sbjct: 183 NMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVE----PDEA 238
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
I ++LSACA++GA+D G W+H YL R GL + + T L+DMY KCG ++ A +F EM
Sbjct: 239 IIVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEM 298
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
++D + W AMIS A++G G+ A F EME G++P+++TF+ +L+AC++SG+V++G
Sbjct: 299 SQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGI 358
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM----EPDVFVWGALLG 450
+ M V+ +EP HY C+ID+LSR G F EAE +I+ +P + W A L
Sbjct: 359 RIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLS 418
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
C HG + E A+ L L+ + A YV L +MYA G+ +D K+ RN+MK +G+ K
Sbjct: 419 ACCKHGQTQQAEVAAERLFQLERHSGA-YVLLSNMYAALGKHEDAKRVRNMMKLKGVEK- 476
Query: 511 VPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
VPGCSS++V+GVV+EF + + L+L L+K
Sbjct: 477 VPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLEELNK 514
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/404 (43%), Positives = 263/404 (65%), Gaps = 6/404 (1%)
Query: 154 LVGASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
L+G ++ +++ G V D V S++ L+ C V AR +F EM+ RDVV+WN MI G
Sbjct: 95 LLGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAG 154
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y+++GDL A +LF M +RN+ SW ++I G+ Q R EA+E+F+ MQ +E PD
Sbjct: 155 YVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIE----PD 210
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+ + SVLSAC LGA+D G+WVH ++ R GL ++ + +++DMY KCGC+E+A VF+
Sbjct: 211 GVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFE 270
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
M +K + WT +I+ FAL+G G +A + FR ME E + PN VTF+ +LSAC+H GL +
Sbjct: 271 GMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDL 330
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
GRW F +M Y ++P V HY CM+D+L RAG EA+ L++ MP++ + +WGALL
Sbjct: 331 GRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAAS 390
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
+ HG+ +LGE+ +LI+L+P N Y+ L +++A+ R+DDV K R MKERG+R VP
Sbjct: 391 RTHGDADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRN-VP 449
Query: 513 GCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFG 556
G SS+EVDG+VHEF+ + ++ +L ++ MK+ GF
Sbjct: 450 GASSIEVDGMVHEFTSRDGSHPFLHKICEVLCEINTNMKSVGFA 493
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/477 (37%), Positives = 286/477 (59%), Gaps = 15/477 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L Y+ +F + ++ + +I +A + + L Y QML G+ P+
Sbjct: 23 GRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHE------QALNFYAQMLTQGVEPNAF 76
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +LK C G +++ Q VK G D++V+ ++ ++ G V SA+ LFD M
Sbjct: 77 TFSSILKLCPIE----PGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTM 132
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+ +VS AM+ Y + G+LD A LF M++R+ WN +I G+ Q G EAL LF+
Sbjct: 133 PEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFR 192
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M ++ KP+++T+ SVLSAC LGA++ G+WVH Y+ +G+ +V +GTALVDMY
Sbjct: 193 RM----LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMY 248
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG +E A VF ++ KD +AW +MI +A+ G+ +EA F+ M G+ P ++TF+
Sbjct: 249 SKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFI 308
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+LSAC HSG V +G F M+ Y +EP + HY CM+++L RAG +A L+++M +
Sbjct: 309 GILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNI 368
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EPD +WG LLG C++HG + LGEK+ + L+D + N Y+ L ++YA G +D V +
Sbjct: 369 EPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARL 428
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R +MK+ G++KE PGCSS+EV+ VHEF G ++E+ ++L ++ +K+ G+
Sbjct: 429 RTMMKDSGVKKE-PGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGY 484
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y G ++ + +F WTA+I AL G ++A + + +M +GV PN TF
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYL-VEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
+L C +E G+ + + V L + +Y ++D+ +R G A++L +M
Sbjct: 79 SSILKLCP----IEPGK--ALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTM 132
Query: 437 PMEPDVFVWGALLGGCQMHGNVE 459
P E + A+L HG ++
Sbjct: 133 P-EKSLVSLTAMLTCYAKHGELD 154
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/418 (42%), Positives = 268/418 (64%), Gaps = 5/418 (1%)
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T+ +L C K D L+G V+ +V++ GV D V+N+++ ++ CG + +A +LF+
Sbjct: 162 VTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEG 221
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M R + SW ++I G +RSG +D A DLF M +R+ +W ++I G+VQ GR R+ALE F
Sbjct: 222 MQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETF 281
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+ MQ V + D+ T+ SV++ACA LGA++ G+W Y+ R G+ DV +G AL+DM
Sbjct: 282 RYMQICKV----RADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDM 337
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG +ERA VFK+M +D WTA+I A+NG G+EA D F M P+ VTF
Sbjct: 338 YSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTF 397
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
VG+L+AC H+GLV+KGR F+ M Y + P V HY C+ID+L RAG EA I MP
Sbjct: 398 VGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMP 457
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M+P+ +WG LL C+++GN E+GE A+ L++LDP N Y+ L +MYAK+ R+ DV++
Sbjct: 458 MKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRR 517
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R ++ E+GI+KE PGCS +E++G++HEF + +E+ L + ++N G+
Sbjct: 518 IRQIIMEKGIKKE-PGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGY 574
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 176/371 (47%), Gaps = 27/371 (7%)
Query: 104 RANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK-----ECTKRLDGLVGAS 158
R SS + + + + Y +ML G PD TFP LLK VG +
Sbjct: 18 RRGRAASSSVSGHGAEEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGA 77
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD----EMSNRDVVSWNAMIIGYL 214
++ VVKFG+ + +S+I ++ A G +AR + + V WNA+I G+
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHN 137
Query: 215 RSGDLDVA----LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
RSG +++ +D+ R ++ S+++ +G + L L ++ +E V
Sbjct: 138 RSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKG----KDLLLGMQVHKRVLESGVL 193
Query: 271 PDKITIASVLSACAYLGAIDHGKWV--HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
PD+ +++ A G +D WV G RS VI + LV + G V+RA
Sbjct: 194 PDQRVENALVDMYAECGDMD-AAWVLFEGMQMRSMASWTSVI-SGLV----RSGQVDRAR 247
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F MP++DT+AWTAMI + G ++A +TFR M+ VR + T V +++ACA G
Sbjct: 248 DLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLG 307
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+E G W + M + ++ V+ +ID+ S+ G A + + M D F W A+
Sbjct: 308 ALETGEWARIYMGRLG-IKMDVFVGNALIDMYSKCGSIERALDVFKDMH-NRDKFTWTAI 365
Query: 449 LGGCQMHGNVE 459
+ G ++G E
Sbjct: 366 ILGLAVNGRGE 376
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/524 (37%), Positives = 301/524 (57%), Gaps = 17/524 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
++ C ++E+K+IH Q++ L H + + AL + +L YA + +H
Sbjct: 16 LNSCTTLKEMKQIHAQLVVKGILNNPHFHG---QFVATIALHNTTNLDYANKLLNHNNNP 72
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG---ISPDCLTFPFLLKECTKRL 151
L+T N MIRA + S+ + H Y +L + +SPD TF FL++ C +
Sbjct: 73 TLFTLNSMIRAYSKSSTPSKSFH------FYANILHSNNNNLSPDNYTFTFLVRTCAQLQ 126
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
+ G V+G V+K G D VQ ++ ++ G ++S +FD D+V+ AM+
Sbjct: 127 AHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLN 186
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
+ GD+D A +F M +R+ +WN++I G+ Q GR+REAL++F MQ E VK
Sbjct: 187 ACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQM----EGVKL 242
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
+++++ VLSAC +L +DHG+WVH Y+ R + V +GTALVDMY KCG V+RA VF
Sbjct: 243 NEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVF 302
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
M +++ W++ I A+NG+G+E+ D F +M+ EGV+PN +TF+ +L C+ GLVE
Sbjct: 303 WGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVE 362
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+GR F MR+VY + P + HY M+D+ RAG EA I SMPM P V W ALL
Sbjct: 363 EGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHA 422
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C+M+ N ELGE + +++L+ N YV L ++YA ++ V R MK +G++K +
Sbjct: 423 CRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKK-L 481
Query: 512 PGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
PGCS +EVDG VHEF + +E+ + L +SK ++ G+
Sbjct: 482 PGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGY 525
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/511 (36%), Positives = 307/511 (60%), Gaps = 17/511 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ K+ E K+IH II Q++ ++T+++ C G + YAT +F+ +
Sbjct: 17 LQRVKSRNEWKKIHACIIVHGLSQSS---FMVTKMVDLC--DKLGDMDYATRLFNQVSNP 71
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDG 153
+++ YN +IRA T+++ +++YKQ+L I PD TFPF+ K C
Sbjct: 72 NVFLYNSIIRAY------THNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSC 125
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
+G V+G + KFG V +N++I ++M + A +FDEMS RDV+SWN+++ GY
Sbjct: 126 YLGKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGY 185
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
R G + A LF M + I SW ++I+G+ G EA++ F+EMQ + +E PD+
Sbjct: 186 ARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE----PDE 241
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
I++ SVL +CA+LG+++ GKW+H Y R GL + AL++MY KCG + +A +F++
Sbjct: 242 ISLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQ 301
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
KD ++W+ MIS +A +G AF+TF EM+ V+PN +TF+GLLSAC+H GL ++G
Sbjct: 302 TKGKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQG 361
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
F MMR Y +EP + HY C+ID+L+RAG A + ++MP++PD +WG+LL C+
Sbjct: 362 LKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCR 421
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
GN+++ +L++++P + YV L ++YA G+++DV + R ++++ ++K PG
Sbjct: 422 TKGNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKK-TPG 480
Query: 514 CSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
CS +EV+ +V EF + K E+ L+L
Sbjct: 481 CSLIEVNNIVQEFVAGDNSKPFWTEISLVLQ 511
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 201/487 (41%), Positives = 291/487 (59%), Gaps = 15/487 (3%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M+E K +H +I S Q +H + +L+ S S SL +A +F I Y YN
Sbjct: 1 MQEAKRLHAHLITSGLHQQENH---LRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
M R A + + L L++ ML G PD TFPFLLK C+ G ++
Sbjct: 58 TMFRVYAASPTPLH------ALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQELH 111
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
Q +KFG+ VFV+NS+I L+ + + SAR +FD M RD+ SW ++ Y S +
Sbjct: 112 CQALKFGLGGHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVK 171
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A +F M +R++ S++++I +V+G R REAL+LF+E+ S +E P + SVL
Sbjct: 172 AARKVFDEMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIE----PSDSCVMSVL 227
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLD-CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
ACA LGA+D G+WV+ Y+ +S D D I TAL+DM+ KCG +E A VF+ +K
Sbjct: 228 CACANLGALDVGRWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHV 287
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
WTAM+S A++G G++ + F +M GV+PN VTFV LLS C+HSGLV +G + F
Sbjct: 288 GEWTAMLSGLAMHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDR 347
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + VEP V H+ C++D+L RAGL +A +LI MP EP+ +WG+LL C+++ NVE
Sbjct: 348 MESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVE 407
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
+GE AQ+LI +P N A Y+ L +Y +AGR+D+V+K + MKE G RK PGCS +EV
Sbjct: 408 IGELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKG-PGCSLIEV 466
Query: 520 DGVVHEF 526
G+ +EF
Sbjct: 467 GGICYEF 473
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 203/532 (38%), Positives = 311/532 (58%), Gaps = 50/532 (9%)
Query: 38 CKNMRELKEIH-TQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
C N+ LK+IH T IIK N + + + L+F A+++SG+++YA VF+ I D+
Sbjct: 23 CNNLLALKQIHATLIIKG----FNSNRAALRELIFAGAMTISGAINYAHQVFAQITEPDI 78
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+ +N M+R + + + K + LY QM G+ PD TF FLLK CT+ G
Sbjct: 79 FMWNTMMRGS------SQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTG 132
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT--------------------------- 189
V+G+V+K+G + FV+N++I CG +
Sbjct: 133 FCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARR 192
Query: 190 ----SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
AR +FDEM +D+VSWN MI GY+++G+++ A LF ++++ +WN++I G+V
Sbjct: 193 GELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYV 252
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR-SGL 304
G R+ALE+F+EM++ V E PD++T+ S+LSACA LG + G+ +H + +
Sbjct: 253 LRGEQRQALEMFEEMRN--VGEC--PDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRG 308
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
D V++G ALVDMY KCG +E A VFK+M +KD W ++I A +G+ +E+ F E
Sbjct: 309 DLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAE 368
Query: 365 MEA-EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
M+A + ++PN +TFVG++ AC+H+G VE+GR F +MR Y +EP++ H+ CM+D+L RA
Sbjct: 369 MQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRA 428
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
GL SEA LI M +EP+ +W LLG C++HGNVELG + L+ L YV L
Sbjct: 429 GLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLS 488
Query: 484 DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG-VVHEFSMKGSPKV 534
++YA AG +D ++ R LM + G+RKE G S +E D V +F PK+
Sbjct: 489 NIYASAGEWDGAEEVRKLMDDGGVRKEA-GRSLIEADDRAVMQFLFDPKPKL 539
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 185/517 (35%), Positives = 309/517 (59%), Gaps = 21/517 (4%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +C N+ ELK+IH I+K Q++ L+T+++ C + G YA +F +
Sbjct: 21 LKDCPNIVELKKIHAHIVKFSLSQSS---FLVTKMVDVC--NHYGETEYANLLFKGVADP 75
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-----ISPDCLTFPFLLKECTK 149
+ + YN MIRA + N + + +YKQML I PD TFPF++K C
Sbjct: 76 NAFLYNAMIRA-----YKHNKVYV-LAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAG 129
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+ +G V+G V KFG + V+NS++ +++ C + A +F+EM+ RD VSWN +
Sbjct: 130 LMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTL 189
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I G++R G + A +F M+ + IFSW +I++G+ + G +ALE F+ MQ +E
Sbjct: 190 ISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIE--- 246
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
PD+I++ SVL CA LGA++ GKW+H Y ++G ++ + AL++MY KCG +++
Sbjct: 247 -PDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRR 305
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
+F +M ++D ++W+ MI A +G +EA + F+EM+ + P+ +TFVGLL+ACAH+GL
Sbjct: 306 LFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGL 365
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
+ +G F M+ Y +EP V HY C++++L +G +A L++ MP +PD +WG+LL
Sbjct: 366 LNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLL 425
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C+ HGN+++ ++L++L+P + YV L ++YA G++D V + R LM+ + ++K
Sbjct: 426 SSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKK 485
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
PGCSS+EVD +V EF+ K + + +L L
Sbjct: 486 -TPGCSSIEVDNMVQEFASGDDSKPFSKAICRVLKLL 521
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 191/530 (36%), Positives = 295/530 (55%), Gaps = 41/530 (7%)
Query: 57 LQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDT 116
++TN + F ALS + YA ++ ++ +++ YN MI+
Sbjct: 6 VKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGF------VQSY 59
Query: 117 HSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQN 176
+ L+LY QML +SP TFP L+K C +V+G V + G VFVQ
Sbjct: 60 QPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQT 119
Query: 177 SVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL----------------- 219
S++ + + G + + +FDEM RDV +W M+ G +R GD+
Sbjct: 120 SLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLAT 179
Query: 220 --------------DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
DVA LF +M R+I SW ++I + Q R REAL +F EM
Sbjct: 180 WNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEM----A 235
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
+ + PD++T+A+V+SACA+LGA+D GK +H Y+ + G + DV IG+AL+DMY KCG ++
Sbjct: 236 KHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLD 295
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
R+ +F ++ +K+ W ++I A++GY +EA F +ME E ++PN VTFV +LSAC
Sbjct: 296 RSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACN 355
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
H+GL+E+GR F M + + P V HY CM+D+LS+AGL EA +LIR+M +EP+ +W
Sbjct: 356 HAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIW 415
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
GALL GC++H N+E+ + A L+ L+P N +Y L +M A+ R+ + K R MKE+
Sbjct: 416 GALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQ 475
Query: 506 GIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G+ K PG S +E++ VH+F+ +E+ +L L MK G+
Sbjct: 476 GVEKRCPGSSWIEMESQVHQFAASDKSHAASDEIYSLLAELDGQMKLAGY 525
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 299/487 (61%), Gaps = 12/487 (2%)
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA-NACKSSETNDTHSGKCLKLYKQML 129
F S+ G ++YA +F ++ T+N+++ N K E K L + +
Sbjct: 177 FIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYE-----ESKRLFIEMEKK 231
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCD-DVFVQNSVISLFMACGFV 188
C +SP+ +T +L C+K D + G +Y + +K G+ + ++ ++N++I +F +CG +
Sbjct: 232 CECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEM 291
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
+AR +FDEM RDV+SW +++ G+ + +D+A F +M +R+ SW ++I G+++
Sbjct: 292 DAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMN 351
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
R +E L LF++MQ S+V KPD+ T+ S+L+ACA+LGA++ G+W Y+ ++ + D
Sbjct: 352 RFKEVLTLFRDMQMSNV----KPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDT 407
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
IG AL+DMY KCG VE+A +F EM KKD WTAMI A NG+G+EA F M
Sbjct: 408 FIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEA 467
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
V P+ +T++G++ AC H GLV KG+ F M + ++P++ HY CM+D+L RAG E
Sbjct: 468 SVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKE 527
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A +I +MP++P+ VWG+LLG C++H NV+L E A +++L+P N A YV LC++YA
Sbjct: 528 ALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAA 587
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
++ ++ R +M ERGI+K +PGCS +E++G+V+EF +E+ L + +
Sbjct: 588 CKKWKNLHNVRKMMMERGIKK-IPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQ 646
Query: 549 IMKNGGF 555
+ N G+
Sbjct: 647 DLSNAGY 653
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 226/469 (48%), Gaps = 77/469 (16%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
++ C M E+ +IH+Q IK+ L +N H +T+++ FC SG + YA VF I +
Sbjct: 42 LETCNTMYEINQIHSQTIKTG-LSSN--HLFLTKVIIFCCTKESGDVYYARKVFDEIPQP 98
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
++ +N MI+ S N + SG + LYK ML I PD TFPFLLK TK +
Sbjct: 99 SVFIWNTMIKG----YSRINCSESG--VSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALK 152
Query: 155 VGASVYGQVVKFGVCD-DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G + V G D ++FVQ I LF CG V AR +FD +VV+WN ++ GY
Sbjct: 153 YGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGY 212
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
R F+R + E+ LF EM+ E V P+
Sbjct: 213 NR----------FKRYE---------------------ESKRLFIEMEKKC--ECVSPNS 239
Query: 274 ITIASVLSACAYLGAIDHGKWVHG-YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+T+ +LSAC+ L + GK ++ Y++ ++ ++++ AL+DM+ CG ++ A GVF
Sbjct: 240 VTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFD 299
Query: 333 EMPKKDTLAWTAMISVFA--------------------------LNGY-----GKEAFDT 361
EM +D ++WT++++ FA ++GY KE
Sbjct: 300 EMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTL 359
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR+M+ V+P+ T V +L+ACAH G +E G W + ++ + +ID+
Sbjct: 360 FRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDK-NKIKNDTFIGNALIDMYF 418
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
+ G +A+++ M + D F W A++ G +G+ E + Y+++
Sbjct: 419 KCGNVEKAKKIFNEM-QKKDKFTWTAMIVGLANNGHGEEALTMFSYMLE 466
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 185/492 (37%), Positives = 296/492 (60%), Gaps = 11/492 (2%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
+L + F S+ + A VF ++ T+NIM+ S K
Sbjct: 141 NLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIML------SGYNRVKQFKKSKM 194
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
L+ +M G+SP+ +T +L C+K D G +Y + V ++ ++N +I +F
Sbjct: 195 LFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFA 254
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
ACG + A+ +FD M NRDV+SW +++ G+ G +D+A F ++ +R+ SW ++I G
Sbjct: 255 ACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDG 314
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
+++ R EAL LF+EMQ S+V KPD+ T+ S+L+ACA+LGA++ G+WV Y+ ++
Sbjct: 315 YLRMNRFIEALALFREMQMSNV----KPDEFTMVSILTACAHLGALELGEWVKTYIDKNS 370
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
+ D +G AL+DMY KCG V +A VFKEM KD WTAMI A+NG+G+EA F
Sbjct: 371 IKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFS 430
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
M + P+ +T++G+L AC H+G+VEKG+ F+ M + ++P+V HY CM+D+L RA
Sbjct: 431 NMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRA 490
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
G EA +I +MP++P+ VWG+LLG C++H NV+L E A+ +++L+P N A YV LC
Sbjct: 491 GRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLC 550
Query: 484 DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLIL 543
++YA R++++++ R LM ERGI+K PGCS +E++G V+EF +E+ L
Sbjct: 551 NIYAACKRWENLRQVRKLMMERGIKK-TPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKL 609
Query: 544 NGLSKIMKNGGF 555
+ + + G+
Sbjct: 610 ENMMQDLIKAGY 621
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 212/461 (45%), Gaps = 87/461 (18%)
Query: 35 IDECKNMRELKEIHTQIIK-----SPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
+++CK+M +LK+IH+ IK P Q R++ FC SG + YA VF
Sbjct: 14 LEKCKSMYQLKQIHSHTIKMGLSSDPLFQK--------RVIAFCCAHESGKMIYARQVFD 65
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
I + L+ +N MI+ S N +G + +Y ML + I PD TFPFLLK T+
Sbjct: 66 AIPQPTLFIWNTMIKG----YSRINHPQNG--VSMYLLMLASNIKPDRFTFPFLLKGFTR 119
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+ G + VK G ++FVQ + I +F C V AR +FD +VV+WN M
Sbjct: 120 NMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIM 179
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
+ GY R + LF M+KR V
Sbjct: 180 LSGYNRVKQFKKSKMLFIEMEKRG-----------------------------------V 204
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
P+ +T+ +LSAC+ L ++ GK ++ Y+ ++ ++++ L+DM+ CG ++ A
Sbjct: 205 SPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQS 264
Query: 330 VFKEMPKKDTLAWTAMISVFA--------------------------LNGYGK-----EA 358
VF M +D ++WT++++ FA ++GY + EA
Sbjct: 265 VFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEA 324
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
FREM+ V+P+ T V +L+ACAH G +E G W + ++ + +ID
Sbjct: 325 LALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNS-IKNDTFVGNALID 383
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ + G +A+++ + M D F W A++ G ++G+ E
Sbjct: 384 MYFKCGNVGKAKKVFKEMH-HKDKFTWTAMIVGLAINGHGE 423
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 315/523 (60%), Gaps = 17/523 (3%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + +D CK+M ELK IH + L + ++ ++LL F ALS + L Y+ + +
Sbjct: 16 LISLLDGCKSMFELKRIHALLFT---LGISQDETIKSKLLLFSALSPARDLDYSYKLILN 72
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
+ + +N +IRA +N + + ++ +ML G+SPD LT+PFL+K +K
Sbjct: 73 VPNPTTFNWNTLIRAF------SNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKL 126
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
L+ +G +V+ +VK G D F+QNS+I ++ +C + SAR +FDEM +++V+WNAM+
Sbjct: 127 LNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAML 186
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY + GDL++A ++F M ++++ SW+S+I G+V+G EA+ LF+ M
Sbjct: 187 DGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDG----PM 242
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
+++T+ S L ACA+LGA++HG+ +H Y+ + L +V+ T+LVDMY KCG + A V
Sbjct: 243 ANEVTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTV 302
Query: 331 FK--EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
F+ + + D L W A+I A +G KEA + F EM+ G+ P+ +T++ LLS CAH G
Sbjct: 303 FRACSLQEADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGG 362
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
LVE+ + F +R ++ P V HYACM+D LSRAG SEA + + MP++P + GAL
Sbjct: 363 LVEEAWYFFDCLRKHGMI-PKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGAL 421
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
L GC HG +++ + V + L++LDP + YV L ++YA R+DD K R M+ +G++
Sbjct: 422 LSGCMKHGKLDIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVK 481
Query: 509 KEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
K PG S +EV GV+H F E++ ++LN + MK
Sbjct: 482 KS-PGFSFIEVYGVLHRFMAHDKTHGDCEQIFMMLNLIVDQMK 523
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 207/524 (39%), Positives = 312/524 (59%), Gaps = 31/524 (5%)
Query: 18 KVSPPNKESTKLILRN---AIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCA 74
+ SP N + + ++ + C +++LK+IHTQII + Q N L+ +LL F
Sbjct: 5 EASPANLTGLRALQQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKN---FLLVKLLSF-- 59
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS 134
SG+L A VF I+ +N MIR + S++ H K ++LY +M+
Sbjct: 60 YITSGNLLNAHKVFERIENPSTTVWNQMIRGH----SQSETPH--KLVELYNRMVEAEAE 113
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF-MACGF--VTSA 191
P+ T+ FL+ C + G V+G+VV G C +VFV+ S+++L+ +A G+ V A
Sbjct: 114 PNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKA 173
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R +FDE+ +R++VSWN+++ GY+R GD+D A +F M +RN+ SW ++I G Q GR +
Sbjct: 174 RRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCK 233
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY----LRRSGLDCD 307
+AL LF EM+ + V K D++ + + LSACA LG + G W+H Y L
Sbjct: 234 QALHLFHEMRRAGV----KLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLL 289
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
V + +L+ MY CG +++AY VF M ++ T++WT+MI+ FA G+ +EA F+ M+
Sbjct: 290 VSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQR 349
Query: 368 EGV---RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
G RP+ +TF+G+L AC+H+G V++GR F M + + P + HY CM+D+LSRAG
Sbjct: 350 LGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAG 409
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL-IDLDPLNHAFY-VNL 482
EA RLI SMPM+P+ VWGALLGGC++H N EL VAQ L ++L P A Y V L
Sbjct: 410 FLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELASHVAQKLALELKPDQAAGYLVLL 469
Query: 483 CDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++YA A R+ DV R M E G+RK G S V+++GVVH+F
Sbjct: 470 SNVYATAKRWQDVALVRQKMVEIGVRKPA-GRSWVQINGVVHDF 512
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 201/538 (37%), Positives = 318/538 (59%), Gaps = 18/538 (3%)
Query: 19 VSPPNKEST-KLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV 77
VSP K + L + +D+CK+M ELK++H I + +S I ++L F ALS
Sbjct: 4 VSPSCKTANINGTLLSLLDKCKSMLELKKLHAIGIS---YGLSHEYSFIFKILSFSALSN 60
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SG + Y+ VFS I ++++NI+IR S+ N HS L ++ +ML G++PD
Sbjct: 61 SGDIDYSYRVFSQISSPTIFSWNIIIRG---YSNSKNPIHS---LSIFLKMLRHGVAPDY 114
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
LT+PFL+K + G SV+ Q++K G D F+QNS+I ++ +CG + A +F+
Sbjct: 115 LTYPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFES 174
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M +++VSWN+M+ GY + G++ +A +F M++R++ SW+S I G+V+ G REA+ +F
Sbjct: 175 MQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVF 234
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
++M++ K +++T+ SVLSACA+LGA+ G+ +H Y+ + L +V+ T+LVDM
Sbjct: 235 EKMRAVG----PKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDM 290
Query: 318 YGKCGCVERAYGVFKEMPKK--DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
Y KCG +E A VF+ + K D W AMI A +G +E+ F+EM+ G+R + +
Sbjct: 291 YAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEI 350
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
T++ LL+ACAH GLV++ W F + P HYACM+D+L+RAG + A + I
Sbjct: 351 TYLCLLAACAHGGLVKEA-WNFFESLVKRGMTPTSEHYACMVDVLARAGQLTTAYQFICQ 409
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
+P+EP + GA+ GC H N +L E V + LI+LDP N Y+ L ++YA R+DD
Sbjct: 410 IPIEPTASMLGAIFSGCINHRNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDS 469
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNG 553
K R M+ RG++K PG S VE+ + H F +E +L+ + MK+G
Sbjct: 470 KSMREAMERRGVKKS-PGFSFVEISEIHHRFIAHDKTHPDSDETYSMLHFVVCQMKHG 526
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 191/529 (36%), Positives = 309/529 (58%), Gaps = 21/529 (3%)
Query: 5 LQMVSYSLLNSPAKVSPPNKESTKLI---LRNAIDECKNMRELKEIHTQIIKSPCLQTND 61
L SY L + + + ++ K++ L + + C ++ ++K++H I + Q
Sbjct: 13 LPKTSYCQLQTQSFIPFSVRQEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCF 72
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
+ + R L + + Y VF ++ + + + +IR A +
Sbjct: 73 VLAKLLRTLTKLDVPMD---PYPRLVFQQVEYPNPFLWTALIRGYALQGPFMES------ 123
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVIS 180
+ LY M GI P TF LLK C+ LD +G V+ Q + G D++V N++I
Sbjct: 124 VLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLID 183
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
+++ CG + +FDEM +RDV+SW ++I+ Y + G+++ A +LF + +++ +W ++
Sbjct: 184 MYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAM 243
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
+TG+ Q R REALE+F+ MQ++ V K D++T+ V+SACA LGA + WV
Sbjct: 244 VTGYAQNARPREALEVFERMQAAGV----KTDEVTLVGVISACAQLGAAKYANWVRDVAE 299
Query: 301 RSGL--DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
+SG +VV+G+AL+DMY KCG VE AY VF+ M +++ ++++MI FA++G A
Sbjct: 300 QSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAA 359
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
+ F EM ++PN VTF+G+L+AC+H+G+VE+G+ F MM + V P HYACM+D
Sbjct: 360 MELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVD 419
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+L RAG EA L++ MPM P VWGALLG C++HGN ++ + A +L +L+P
Sbjct: 420 LLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGN 479
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE-VDGVVHEF 526
Y+ L ++YA AGR+DDV K R LM+ +G++K PGCS VE G++HEF
Sbjct: 480 YILLSNIYASAGRWDDVSKVRKLMRAKGLKKN-PGCSWVEGKKGIIHEF 527
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 193/523 (36%), Positives = 309/523 (59%), Gaps = 16/523 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
++ C +RELK+IHTQ++ + L ND L+ + + AL+ +L Y+ V + +
Sbjct: 16 VEPCTTLRELKQIHTQLLINGLL--NDPQ-LVGQFVASIALNNPNNLHYSNQVLDNSQNP 72
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG--ISPDCLTFPFLLKECTKRLD 152
L+T+N MIRA++ S+ H Y ++L + ++PD TF FL++ + L
Sbjct: 73 TLFTFNSMIRAHSKSSTPHRSFH------FYSRILHSAGYLAPDNYTFTFLVRTSAQLLA 126
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
G+SV+G VK+G D VQ+ +I ++ G + + +F + D+V AM+
Sbjct: 127 HGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSA 186
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+ GD+ A LF +M ++ +WN++I+G+VQ G++REAL LF MQ E VK +
Sbjct: 187 CAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQ----REGVKVN 242
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
++++ SVLSAC++LGA+D G+W H Y+ R+ L + +GTAL+DMY KCG + +A VF
Sbjct: 243 EVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFW 302
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
M +K+ W++ I A+NG G++ + F M+ + V+PN +TFV +L C+ GLVE+
Sbjct: 303 GMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEE 362
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
GR F M VY +EP + HY CM+D+ RAG EA I SMP+ P V WGALL C
Sbjct: 363 GRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNAC 422
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
+++ N+E+GE ++ +++L+ NH YV L ++YA + +D V R M +G+RK+ P
Sbjct: 423 KIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQ-P 481
Query: 513 GCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
GCS +EV G VHEF + E+ ++L +S+ +K G+
Sbjct: 482 GCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGY 524
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 303/518 (58%), Gaps = 19/518 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +C NM +LK+ H Q++KS +N +++RLL FCA S +GSLS+A +F HI+
Sbjct: 12 LHKCINMNQLKQAHAQVLKSGLHNSN---FVLSRLLNFCAESRNGSLSHAFKLFQHIQHP 68
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ +N MI+A + N + ++ + GI PD T P++LK + +
Sbjct: 69 TICIFNTMIKALLLRGEFLN------AIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIH 122
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G S++ +K G + FV NS++ ++ + + SAR +FDEM VSW MI GY
Sbjct: 123 LGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYA 182
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
GD+D A +LF ++ W ++I+G+VQ +E L +F+ MQ + VE PD+
Sbjct: 183 NMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVE----PDEA 238
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
I ++LSACA++GA+D G W+H YL R GL + + T L+DMY KCG ++ A +F EM
Sbjct: 239 IIVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEM 298
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
++D + W AMIS A++G G+ A F EME G++P+++TF+ + AC++SG+V++G
Sbjct: 299 SQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGI 358
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM----EPDVFVWGALLG 450
+ M V+ +EP HY C+ID+LSR G F EAE +I+ +P + W A L
Sbjct: 359 RIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLS 418
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
C HG + E A+ L L+ + A YV L +MYA G+ +D K+ RN+MK +G+ K
Sbjct: 419 ACCKHGQTQQAEVAAERLFQLERHSGA-YVLLSNMYAALGKHEDAKRVRNMMKLKGVEK- 476
Query: 511 VPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
VPGCSS++V+GVV+EF + + L+L L+K
Sbjct: 477 VPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLEELNK 514
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/472 (38%), Positives = 288/472 (61%), Gaps = 11/472 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G A VF DL ++N +I + + + +Y+QM+ + PD +
Sbjct: 203 GESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPR------EAMGIYQQMITEHVKPDEV 256
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T ++ C + +G ++ + + G+ + + N+++ +++ CG + + ++LFD M
Sbjct: 257 TMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNM 316
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+ VVSW MI+GY ++G LD+A LF M ++N+ +WN++I VQ + EALELF+
Sbjct: 317 RKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFR 376
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ S++ KPDK+T+ LSAC+ LGA+D G W H Y+++ L DV +GTAL+DMY
Sbjct: 377 EMQWSNM----KPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMY 432
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + +A VF EMP++++L WTA+I AL G +A F +M G+ P+ +TF+
Sbjct: 433 AKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFL 492
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L+AC H GLVE+GR F M+ + + P HY+CM+++L RAGL EAE LI++MPM
Sbjct: 493 GVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPM 552
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
E D VWGAL C +H N+ +GE+ A L+DLDP + YV L +MY +AG++++ +
Sbjct: 553 EADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNI 612
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
R +M ERG+ K PG SS+EV+G+++EF ++ E++ N ++K +
Sbjct: 613 RKMMMERGVEK-TPGSSSIEVNGIINEFIVRDKSHPQSEQIYECFNLINKTI 663
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 232/460 (50%), Gaps = 78/460 (16%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + ++ CK+ +LK+I Q+I + + S RL+ FCA+S S +L Y + ++
Sbjct: 56 LLSLLENCKSFSQLKQIQAQMILTGLILDGFASS---RLISFCAISESRNLDYCIKILNN 112
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDCLTFPFLLKECTK 149
++ +++++N +IR C SE + K L LYK+ML G PD T+ FL K C
Sbjct: 113 LQNPNVFSWNAVIRG--CVESE----NPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCAN 166
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+ +G + GQV+K G D+++ N +I + ++ G A +FDE RD+VSWN++
Sbjct: 167 LVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSL 226
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I GY+R RR + REA+ ++Q+M + E V
Sbjct: 227 INGYVR-----------RR--------------------QPREAMGIYQQM----ITEHV 251
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
KPD++T+ V+SACA L ++ G+ +H Y+ SGL+ + + AL+DMY KCG +E
Sbjct: 252 KPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKV 311
Query: 330 VFKEMPKKDTLAWTAMISVFALNGY----GK---------------------------EA 358
+F M KK ++WT MI +A NG GK EA
Sbjct: 312 LFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEA 371
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
+ FREM+ ++P+ VT + LSAC+ G ++ G W ++ + + V +ID
Sbjct: 372 LELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKK-HNLSLDVALGTALID 430
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+ ++ G ++A ++ MP + W A++GG ++GNV
Sbjct: 431 MYAKCGNMTKALQVFNEMPRR-NSLTWTAIIGGLALYGNV 469
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 311/524 (59%), Gaps = 37/524 (7%)
Query: 9 SYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHS--LI 66
S SLL+ VSP + + +L N ELK++H ++K TN S +
Sbjct: 4 SLSLLH----VSPLHHRPSTHLLHNFTSPF----ELKQLHAHLLK-----TNSPLSSLPL 50
Query: 67 TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYK 126
+R+ CA + S SYA +F + S++ +N +R+ A S + + L+
Sbjct: 51 SRVASVCAFN--SSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPAD------AISLFY 102
Query: 127 QMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
++ ISPD T F+LK C++ LD G V+G V K G+ ++F+QN ++ L+ CG
Sbjct: 103 RLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCG 162
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
+ AR +FD+M RDV++WN MI ++ GD + A LF M +RN+ SW S+I G+ Q
Sbjct: 163 EIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQ 222
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G+++EA++LF EM+ + + P+++T+ +VL ACA +G + G+ +H + RSG +
Sbjct: 223 CGKSKEAIDLFLEMEDAGL----LPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEK 278
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
++ + L+DMY KCGC+E A +F M ++ ++W+AMI+ A +G ++A F +M
Sbjct: 279 NIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMI 338
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
GV+PN VTF+G+L AC+H G+VEKGR F M Y + P + HY CM+D+ SRAGL
Sbjct: 339 NTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLL 398
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
EA I +MP+ P+ VWGALLGGC++H NV+L E+ ++L LDPLN +YV L ++Y
Sbjct: 399 QEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIY 458
Query: 487 AKAGRFDDVKKTRNLMKERG----------IRKEVPGCSSVEVD 520
A+AGR++DV + R LM++RG ++ VP S V +D
Sbjct: 459 AEAGRWEDVARVRKLMRDRGTWEKLLQRMKLKGYVPNTSVVLLD 502
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 316/518 (61%), Gaps = 22/518 (4%)
Query: 45 KEIHTQIIKSPCLQTNDH-HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMI 103
+++H ++K LQ N H+ + ++ C G L A VF ++D+ T+N++I
Sbjct: 138 RQLHGHVLKHG-LQYNVFVHTALVQMYLLC-----GQLDTARGVFDVCPKADVITWNMII 191
Query: 104 RA--NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
A K E+ +L+ M + P +T +L C+K D G V+
Sbjct: 192 SAYNKVGKFEESR--------RLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 243
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
V V ++ ++N++I ++ CG + SA +F M+NRD++SW ++ G+ G++DV
Sbjct: 244 YVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDV 303
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
A + F +M +++ SW ++I G+++ R +EALELF+ MQ+++V KPD+ T+ SVL+
Sbjct: 304 ARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV----KPDEFTMVSVLT 359
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
ACA+LGA++ G+W+ Y+ R+ + D+ + AL+DMY KCG V++A +F+EM ++D
Sbjct: 360 ACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT 419
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
WTAMI A+NG+G++A D F M + P+ +T++G+LSAC H+GLV+KGR F+ M
Sbjct: 420 WTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMT 479
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
+ +EP++ HY C++D+L+RAG EA +I +MP++ + VWGALL GC+++ ++
Sbjct: 480 SQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMA 539
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
E V + +++L+P N A YV LC++YA R++D+++ R +M ++GI+K PGCS +E++G
Sbjct: 540 EMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKK-TPGCSLIEMNG 598
Query: 522 VVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYI 559
VHEF + + L+ +++ +K G+ I
Sbjct: 599 RVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDI 636
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 224/475 (47%), Gaps = 85/475 (17%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
SPP L+ + C++M +L+++H Q IK N + L R++ FC G
Sbjct: 15 SPPTHPLISLL-----ETCESMDQLQQVHCQAIKK---GLNANPVLQNRVMTFCCTHEYG 66
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
YA +F I +L+ +N MIR S + G + LY +ML G+ PD T
Sbjct: 67 DFQYARRLFDEIPEPNLFIWNTMIRG----YSRLDFPQLG--VSLYLEMLRRGVKPDRYT 120
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
FPFL K T+ + G ++G V+K G+ +VFV +++ +++ CG + +AR +FD
Sbjct: 121 FPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCP 180
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
DV++WN +I Y + G + + LF M+ + +
Sbjct: 181 KADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVL------------------------ 216
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
P +T+ VLSAC+ L + GK VH Y++ ++ ++V+ A++DMY
Sbjct: 217 -----------PTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 265
Query: 320 KCGCVERAYGVFK-------------------------------EMPKKDTLAWTAMISV 348
CG ++ A G+F+ +MP+KD ++WTAMI
Sbjct: 266 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 325
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
+ + KEA + FR M+A V+P+ T V +L+ACAH G +E G W + ++
Sbjct: 326 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDR-NKIKN 384
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEK 463
++ +ID+ + G +AE + R M + D F W A++ G ++G+ GEK
Sbjct: 385 DLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMIVGLAVNGH---GEK 435
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 9/294 (3%)
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
GD A LF + + N+F WN++I G+ + + + L+ EM + VKPD+ T
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEM----LRRGVKPDRYTF 121
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+ A+++G+ +HG++ + GL +V + TALV MY CG ++ A GVF PK
Sbjct: 122 PFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPK 181
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
D + W +IS + G +E+ F ME + V P VT V +LSAC+ + G+
Sbjct: 182 ADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV 241
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+++ VE ++ MID+ + G A + RSM D+ W ++ G G
Sbjct: 242 HSYVKNCK-VESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLG 299
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
+++ Y + ++ + + D Y ++ RF + + M+ ++ +
Sbjct: 300 EIDVAR---NYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPD 350
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 316/518 (61%), Gaps = 22/518 (4%)
Query: 45 KEIHTQIIKSPCLQTNDH-HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMI 103
+++H ++K LQ N H+ + ++ C G L A VF ++D+ T+N++I
Sbjct: 159 RQLHGHVLKHG-LQYNVFVHTALVQMYLLC-----GQLDTARGVFDVCPKADVITWNMII 212
Query: 104 RA--NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
A K E+ +L+ M + P +T +L C+K D G V+
Sbjct: 213 SAYNKVGKFEESR--------RLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 264
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
V V ++ ++N++I ++ CG + SA +F M+NRD++SW ++ G+ G++DV
Sbjct: 265 YVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDV 324
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
A + F +M +++ SW ++I G+++ R +EALELF+ MQ+++V KPD+ T+ SVL+
Sbjct: 325 ARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV----KPDEFTMVSVLT 380
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
ACA+LGA++ G+W+ Y+ R+ + D+ + AL+DMY KCG V++A +F+EM ++D
Sbjct: 381 ACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT 440
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
WTAMI A+NG+G++A D F M + P+ +T++G+LSAC H+GLV+KGR F+ M
Sbjct: 441 WTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMT 500
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
+ +EP++ HY C++D+L+RAG EA +I +MP++ + VWGALL GC+++ ++
Sbjct: 501 SQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMA 560
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
E V + +++L+P N A YV LC++YA R++D+++ R +M ++GI+K PGCS +E++G
Sbjct: 561 EMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKK-XPGCSLIEMNG 619
Query: 522 VVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYI 559
VHEF + + L+ +++ +K G+ I
Sbjct: 620 RVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDI 657
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 233/495 (47%), Gaps = 86/495 (17%)
Query: 1 MSKKLQMVSYSLLNSPAK-VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQT 59
+ K QM + + +S K SPP L+ + C++M +L+++H Q IK
Sbjct: 16 VKKPKQMTTIAATSSALKSFSPPTHPLISLL-----ETCESMDQLQQVHCQAIKK---GL 67
Query: 60 NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
N + L R++ FC G YA +F I +L+ +N MIR S + G
Sbjct: 68 NANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRG----YSRLDFPQLG 123
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ LY +ML G+ PD TFPFL K T+ + G ++G V+K G+ +VFV +++
Sbjct: 124 --VSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALV 181
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
+++ CG + +AR +FD DV++WN +I Y + G + + LF M+ + +
Sbjct: 182 QMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVL---- 237
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
P +T+ VLSAC+ L + GK VH Y+
Sbjct: 238 -------------------------------PTTVTLVLVLSACSKLKDLRTGKKVHSYV 266
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK--------------------------- 332
+ ++ ++V+ A++DMY CG ++ A G+F+
Sbjct: 267 KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVAR 326
Query: 333 ----EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+MP+KD ++WTAMI + + KEA + FR M+A V+P+ T V +L+ACAH G
Sbjct: 327 NYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLG 386
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+E G W + ++ ++ +ID+ + G +AE + R M + D F W A+
Sbjct: 387 ALELGEWIRTYIDR-NKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAM 444
Query: 449 LGGCQMHGNVELGEK 463
+ G ++G+ GEK
Sbjct: 445 IVGLAVNGH---GEK 456
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 135/278 (48%), Gaps = 9/278 (3%)
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
GD A LF + + N+F WN++I G+ + + + L+ EM + VKPD+ T
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEM----LRRGVKPDRYTF 142
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+ A+++G+ +HG++ + GL +V + TALV MY CG ++ A GVF PK
Sbjct: 143 PFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPK 202
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
D + W +IS + G +E+ F ME + V P VT V +LSAC+ + G+
Sbjct: 203 ADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV 262
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+++ VE ++ MID+ + G A + RSM D+ W ++ G G
Sbjct: 263 HSYVKNCK-VESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLG 320
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
+++ Y + ++ + + D Y ++ RF +
Sbjct: 321 EIDVAR---NYFDKMPEKDYVSWTAMIDGYIRSNRFKE 355
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 188/518 (36%), Positives = 297/518 (57%), Gaps = 13/518 (2%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +C ++ +LK+IH + + L + H L + L GS A VF+HI+
Sbjct: 10 LQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQL---GSPVDAQKVFNHIQNP 66
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
D+ ++ +I S + + K ++ + +G+ PD + C R D
Sbjct: 67 DIVSWTCLI------SLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLS 120
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G V+G V +F + D V N++I ++ G + A +F M +DV SW +++ G++
Sbjct: 121 NGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFI 180
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+ D++ A +F M RN SW ++ITG+VQG LELFQEM++ + P I
Sbjct: 181 KCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDW---PTVI 237
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
TI +VLS CA +GA D G VHGY+ ++ LD DV + AL+DMY K G + A +F+EM
Sbjct: 238 TIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEM 297
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
PK+D +WT MIS AL+G G A + F +M GV PN VT + +LSAC+H+GLV +GR
Sbjct: 298 PKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGR 357
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M + ++P + HY CM+D+L RAGL EA+ LI MP++PD +W +LL C +
Sbjct: 358 SLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLV 417
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
HGN+ L E + +I+L+P + Y+ L ++Y A R++D K R M++R ++K+ PGC
Sbjct: 418 HGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKK-PGC 476
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
S VEV+GVVHEF + + ++ ++ +L +++ MK+
Sbjct: 477 SWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQMKD 514
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 311/507 (61%), Gaps = 23/507 (4%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS--------LSYATN 86
+ C + +LK IH ++++ + + L AL V S L YA
Sbjct: 19 LQSCSSFSDLKIIHGFLLRTHLISD----VFVASRLLALALCVDDSTFHKPTNLLGYAYG 74
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
+FS I+ +L+ +N++IR C S+ + K Y QML + I PD +TFPFL+K
Sbjct: 75 IFSQIQNPNLFVFNVLIR---CFSTGAEPS---KAFGFYTQMLKSRIWPDNITFPFLIKA 128
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
T+ +VG + Q+V+FG +DV+V+NS++ ++ CG + +A +F +M RDVVSW
Sbjct: 129 STEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSW 188
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
+M+ GY + G ++ A ++F M RN+F+W+ +I G+ + +A++LF+ M+
Sbjct: 189 TSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMK----R 244
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
E V ++ + SV+S+CA+LGA++ G+ H Y+ +S + ++++GTALVDMY +CG +E+
Sbjct: 245 EGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEK 304
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A VF+E+P KD+L+W+++I A++G+ +A F +M G P +T +LSAC+H
Sbjct: 305 AIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSH 364
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
GLV+KG + M+ Y +EP + HY C++D+L RAG +EAE I MP++P+ + G
Sbjct: 365 GGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILG 424
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALLG C+++ N E+ E+V LI++ P + +YV L ++YA AG+++ ++ R++MKE+
Sbjct: 425 ALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKL 484
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPK 533
++K PG S +E+DG +++FSM K
Sbjct: 485 VKKP-PGWSLIEIDGKINKFSMGDDQK 510
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/513 (39%), Positives = 288/513 (56%), Gaps = 43/513 (8%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS-LSYATNVFS 89
L A+ L + H +I S H +TRLL ALS S S L +A +F
Sbjct: 14 LSQALTALTATSHLHQAHAHLIVS---GLASHPFTVTRLLACAALSPSASDLPHAKTIFL 70
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
H + +N +I A SS T D+ + Y ML G PD TFPFL+K +
Sbjct: 71 HTHNPSPFMFNTIIMA----SSRTLDS-----VTFYVCMLHAGHFPDNFTFPFLIKSSSA 121
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE-MSNRDVVSWNA 208
L+G ++ VVKFG+ DVFV N++I+L+ + + SAR +FDE S DVVSW
Sbjct: 122 SPTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTT 181
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM---QSSSV 265
+I G+ SG +D A +F M +N SWN++I+G+ R EA +LF EM ++S
Sbjct: 182 LITGFSNSGQIDEARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASW 241
Query: 266 EEMVK-------------------------PDKITIASVLSACAYLGAIDHGKWVHGYLR 300
MV P++ + S +SACA L A++ G+W+H Y++
Sbjct: 242 SAMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIK 301
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
L +V +GT L+DMYGKCG + A GVF M +++ +W +MI+ ALNG GKEA
Sbjct: 302 EKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEALA 361
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F +M+ G PN +TF+ LL+ C+HSGL+ +GRW F MM VY ++P + HY CM+D+L
Sbjct: 362 LFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLL 421
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
RAGL EA + MPM+P +WGAL+G C++HG VELGE++ + LIDL+P + Y
Sbjct: 422 GRAGLVKEALDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYA 481
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
LC+++A A R+DDV R+L K R + K PG
Sbjct: 482 LLCNIFAAAQRWDDVAMVRDLEKGRKVLKN-PG 513
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 311/525 (59%), Gaps = 25/525 (4%)
Query: 35 IDECKNMRELKEIHTQI-IKSPCLQTNDHHSLITRLL-FFCALSVSGSLSYATNVFSHIK 92
++ C ++ + KE+H QI IK+ LQ + + ++T+LL AL SY +FS +
Sbjct: 15 LERCSSLNQAKEVHAQIYIKN--LQQSSY--VLTKLLRLVTALPHVPLHSYPRLLFSQLH 70
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
+ + + +IRA A + + + L Y M +SP TF L C
Sbjct: 71 TPNPFAWTALIRAYALRGPLS------QALSFYSSMRKRRVSPISFTFSALFSACAAVRH 124
Query: 153 GLVGASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
+GA ++ Q + G D++V N+VI +++ CG + ARM+FDEM RDV+SW +I+
Sbjct: 125 SALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIV 184
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
Y R GD+ A DLF + +++ +W +++TG+ Q +ALE+F+ ++ +E V+
Sbjct: 185 AYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLR----DEGVEI 240
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC--DVVIGTALVDMYGKCGCVERAYG 329
D++T+ V+SACA LGA + W+ SG +V++G+AL+DMY KCG VE AY
Sbjct: 241 DEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYD 300
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VFK M +++ ++++MI FA++G + A F +M GV+PNHVTFVG+L+AC+H+GL
Sbjct: 301 VFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGL 360
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V++G+ F M Y V P YACM D+LSRAG +A +L+ +MPME D VWGALL
Sbjct: 361 VDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALL 420
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G +HGN ++ E ++ L +L+P N Y+ L + YA AGR+DDV K R L++E+ ++K
Sbjct: 421 GASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKK 480
Query: 510 EVPGCSSVEV-DGVVHEFSMK--GSPKV--VKEELVLILNGLSKI 549
PG S VE +G++H+F PK+ +K+EL +L L I
Sbjct: 481 N-PGWSWVEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGI 524
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 187/518 (36%), Positives = 296/518 (57%), Gaps = 13/518 (2%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +C ++ +LK+IH + + L + H L + L GS A VF+HI+
Sbjct: 261 LQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQL---GSPVDAQKVFNHIQNP 317
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
D+ ++ +I S + + K ++ + +G+ PD + C R D
Sbjct: 318 DIVSWTCLI------SLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLS 371
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G V+G V +F + D V N++I ++ G + A +F M +DV SW +++ G++
Sbjct: 372 NGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFI 431
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+ D++ A +F M RN SW ++ITG+VQG LELFQEM++ + P I
Sbjct: 432 KCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDW---PTVI 488
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
TI +VLS CA +GA D G VHGY+ ++ LD DV + AL+DMY K G + A +F+EM
Sbjct: 489 TIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEM 548
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
PK+D +WT MIS AL+G G A + F +M G PN VT + +LSAC+H+GLV +GR
Sbjct: 549 PKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGR 608
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M + ++P + HY CM+D+L RAGL EA+ LI MP++PD +W +LL C +
Sbjct: 609 SLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLV 668
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
HGN+ L E + +I+L+P + Y+ L ++Y A R++D K R M++R ++K+ PGC
Sbjct: 669 HGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKK-PGC 727
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
S VEV+GVVHEF + + ++ ++ +L +++ MK+
Sbjct: 728 SWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITEQMKD 765
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/456 (40%), Positives = 284/456 (62%), Gaps = 13/456 (2%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG--I 133
SV G +++A +F D+ ++N +I +S + L+L+ ++ G +
Sbjct: 167 SVRGPMAFARRLFDESPVRDVVSWNTLI-GGYVRSGLPREA-----LELFWRLAEDGNAV 220
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
PD +T + C + D +G ++ V GV V + N+V+ +++ CG + A
Sbjct: 221 RPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANS 280
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
+F+ +SNR VSW MI+G+ R G ++ A LF M +R++F WN+++ G+VQ + +EA
Sbjct: 281 VFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEA 340
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
+ LF EMQ S V+ P++IT+ ++LSAC+ LGA++ G WVH Y+ R L V +GT+
Sbjct: 341 IALFHEMQKSKVD----PNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTS 396
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
LVDMY KCG +++A VF E+P ++ L WT+MI A +G+ EA + F+ M G++P+
Sbjct: 397 LVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPD 456
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
+TF+G+LSAC H+GLVE GR F +M Y +E + HY+CMID+L RAG EAE+L+
Sbjct: 457 EITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLV 516
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
+MPM+PD VWGAL C+MHGN+ LGEK A L++LDP + YV L +MYA+A
Sbjct: 517 NAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRK 576
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMK 529
K R +M+ G+ K VPGCS +E++GVVHEF +K
Sbjct: 577 KADKVRVMMRHLGVEK-VPGCSCIELNGVVHEFIVK 611
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 226/494 (45%), Gaps = 88/494 (17%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
PP++ ++L + R L ++H + S L ++ I RL+ A S S
Sbjct: 3 PPSR--LLVLLHAGAVHPPSFRVLLKLHAHHLVSGLLSSHSTSPFIDRLVAAFAHSDPAS 60
Query: 81 ---LSYATNVFSHIKRS--DLYTYNIMIRA-NACKSSETNDTHSGKCLKLYKQMLCTGIS 134
L +A + + + + YN RA + C D H CL LY+ +L +G +
Sbjct: 61 PRPLLHALAILASLPSPPDSAFPYNAAFRALSLCPHQHLVDRH---CLPLYRALLHSGSA 117
Query: 135 -PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
PD LTFPFL+K C + GA+V G V K G DVFV N+ + + G + AR
Sbjct: 118 RPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARR 177
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LFDE RDVVSWN +I GY+RS G REA
Sbjct: 178 LFDESPVRDVVSWNTLIGGYVRS-------------------------------GLPREA 206
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
LELF + V+PD++T+ +S CA +G ++ GK +H ++ G+ C V + A
Sbjct: 207 LELFWRLAEDG--NAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNA 264
Query: 314 LVDMYGKCGCVERAYGVFK-------------------------------EMPKKDTLAW 342
++DMY KCG +E A VF+ EMP++D W
Sbjct: 265 VMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPW 324
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
A+++ + N GKEA F EM+ V PN +T V LLSAC+ G +E G W H
Sbjct: 325 NALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWV-----H 379
Query: 403 VYLVEPHVYHYAC-----MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
Y ++ H H + ++D+ ++ G +A + +P++ + W +++ G HG+
Sbjct: 380 HY-IDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQ-NALTWTSMICGLANHGH 437
Query: 458 VELGEKVAQYLIDL 471
+ + Q +IDL
Sbjct: 438 ADEAIEYFQRMIDL 451
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 199/487 (40%), Positives = 289/487 (59%), Gaps = 16/487 (3%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M+E K +H +I S Q +H R L S S SL +A +F + Y YN
Sbjct: 1 MQEAKRLHAHLITSGLHQQENH----LRKLITLYTSSSSSLHHARLLFDAVYHPSTYLYN 56
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
M R A + + L L++ M G PD TFPFLLK C+ L G ++
Sbjct: 57 TMFRVYAASPTPLH------ALLLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQELH 110
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
Q +KFG+ VFV+NS+I L+ + + SAR +FD M RD+ SW ++ Y S ++
Sbjct: 111 CQALKFGLGGHVFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVE 170
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A +F M +R++ S+++++ +V+G R REALELF+E+ S +E P + SVL
Sbjct: 171 AARKVFDEMPERSVVSYSAMLAAYVRGNRFREALELFRELFSVKIE----PSDSCVMSVL 226
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLD-CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
ACA LGA+D G+WV+ ++ S D D I TAL+DM+ KCG +E A VF+ +K
Sbjct: 227 CACANLGALDVGRWVYSFVCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHV 286
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
WTAM+S A++G G++ + F +M G++P+ VTFV LLS C+HSGLV +G + F
Sbjct: 287 GEWTAMLSGLAMHGLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDR 346
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + VEP V H+ C++D+L RAGL +A +LI MP EP+ +WGALL C+++ NVE
Sbjct: 347 MESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVE 406
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
+GE AQ+LI +P N A Y+ L +Y +AGR+D+V+K + MKE G RK PGCS +EV
Sbjct: 407 VGELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKG-PGCSLIEV 465
Query: 520 DGVVHEF 526
G+ +EF
Sbjct: 466 GGICYEF 472
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 194/498 (38%), Positives = 290/498 (58%), Gaps = 22/498 (4%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+++CKN+ LK+ H Q+ + L TN ++RLL FC+ GSL+YA VF I
Sbjct: 12 LEKCKNVNHLKQAHAQVFTTG-LDTNTF--ALSRLLAFCSHPYQGSLTYACRVFERIHHP 68
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
L N +I K+ N G ++ +ML G+ PD T P++LK C D
Sbjct: 69 TLCICNTII-----KTFLVNGNFYGT-FHVFTKMLHNGLGPDNYTIPYVLKACAALRDCS 122
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G V+G K G+ D+FV NS+++++ CG V +AR +FDEM VSW+ MI GY
Sbjct: 123 LGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISGYA 182
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+ GD+D A F +++ W ++I+G+VQ +E L LF+ +Q + V PD+
Sbjct: 183 KVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHV----VPDES 238
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
S+LSACA+LGA+D G W+H YL R + + + T+L+DMY KCG +E A +F M
Sbjct: 239 IFVSILSACAHLGALDIGIWIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSM 298
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
P++D + W AMIS A++G G A F EME G++P+ +TF+ + +AC++SG+ +G
Sbjct: 299 PERDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGL 358
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR-----SMPMEPDVFVWGALL 449
M +Y +EP HY C++D+LSRAGLF EA +IR S + W A L
Sbjct: 359 QLLDKMSSLYEIEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETLAWRAFL 418
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHA-FYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
C HG +L E+ A+ L+ L+ NH+ YV L ++YA +G+ D ++ RN+M+ +G+
Sbjct: 419 SACCNHGQAQLAERAAKRLLRLE--NHSGVYVLLSNLYAASGKHSDARRVRNMMRNKGVD 476
Query: 509 KEVPGCSSVEVDGVVHEF 526
K PGCSSVE+DGVV EF
Sbjct: 477 K-APGCSSVEIDGVVSEF 493
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 203/501 (40%), Positives = 302/501 (60%), Gaps = 28/501 (5%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C +++LK+IHTQII + Q N L+ +LL F SG+L A VF I+
Sbjct: 44 CDTIKKLKQIHTQIIVNGFSQKN---FLLVKLLSF--YITSGNLLNAHKVFERIENPSTT 98
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
+N MIR + S++ H K ++LY +M+ P+ T+ FL+ C + G
Sbjct: 99 VWNQMIRGH----SQSETPH--KLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGE 152
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLF-MACGF--VTSARMLFDEMSNRDVVSWNAMIIGYL 214
V+G+VV G C +VFV+ S+++L+ +A G+ V AR +FDE+ +R++VSWN+++ GY+
Sbjct: 153 QVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYV 212
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
R GD+D A +F M +RN+ SW ++I G Q GR ++AL LF EM+ + V K D++
Sbjct: 213 RCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGV----KLDQV 268
Query: 275 TIASVLSACAYLGAIDHGKWVHGY----LRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
+ + LSACA LG + G W+H Y L V + +L+ MY CG +++AY V
Sbjct: 269 ALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKV 328
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV---RPNHVTFVGLLSACAHS 387
F M ++ T++WT+MI+ FA G+ +EA F+ M+ G RP+ +TF+G+L AC+H+
Sbjct: 329 FIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHA 388
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
G V++GR F M + + P + HY CM+D+LSRAG EA RL SMPM+P+ VWGA
Sbjct: 389 GFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGA 448
Query: 448 LLGGCQMHGNVELGEKVAQYLI-DLDPLNHAFY-VNLCDMYAKAGRFDDVKKTRNLMKER 505
LLGGC++H N EL VAQ L+ +L P A Y V L ++YA A R+ DV R M E
Sbjct: 449 LLGGCRIHKNAELASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEI 508
Query: 506 GIRKEVPGCSSVEVDGVVHEF 526
G+RK G S V+++GVVH+F
Sbjct: 509 GVRKP-AGRSWVQINGVVHDF 528
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/511 (37%), Positives = 293/511 (57%), Gaps = 44/511 (8%)
Query: 60 NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
N + S + L++ ++++SG+++YA +F HI D + +N MIR +A S N
Sbjct: 7 NSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLN----- 61
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ LY QM + PD TFPF+LK CT+ +G V+G+V + G + FV+N++I
Sbjct: 62 -AISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLI 120
Query: 180 SLFMACGFVT-------------------------------SARMLFDEMSNRDVVSWNA 208
CG + AR LFDEM +D+VSWN
Sbjct: 121 YFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNV 180
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
MI GY + G+++ A LF + KR++ +WN++I G+V G ++ALE+F+EM+ SV E+
Sbjct: 181 MITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR--SVGEL 238
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL-DCDVVIGTALVDMYGKCGCVERA 327
PD++T+ S+LSAC LG +D G+ +H + G D V++G AL+DMY KCG + RA
Sbjct: 239 --PDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRA 296
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF+ M +KD W +++ A +G+ +++ F EM +RP+ +TFVG+L AC+H+
Sbjct: 297 LEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHA 356
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
G VE+GR F +MR Y +EP++ HY CM+D+L RAGL +EA I +M +EP+ VW
Sbjct: 357 GRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRT 416
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
LLG C++HGNVELG + L+ + YV L ++YA G +D V+K R LM + G+
Sbjct: 417 LLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGV 476
Query: 508 RKEVPGCSSVEVDG-VVHEFSMKGSPKVVKE 537
RKE GCS +E D + F P + E
Sbjct: 477 RKEA-GCSLIEGDNKALMHFLFDSKPNLFIE 506
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 193/478 (40%), Positives = 288/478 (60%), Gaps = 38/478 (7%)
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
S ++ T FSH + + +N +IRA+ ++ T THS + ++ +M G+ PD
Sbjct: 9 SSTHPTLHFSH-PTLESFLWNTLIRAHVQARAQPTGPTHSP--ISIFVRMRFHGVQPDFH 65
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TFPFLL+ +G SV+ Q+++FG+ D FVQ S+IS++ + G V
Sbjct: 66 TFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLV---------- 115
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D+A +LF M +RN+ SW+ +I G+V+ G+ +EAL LF+
Sbjct: 116 ---------------------DMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFR 154
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ V + V+P++ T++ VL+AC LGA++HGKW H Y+ + G+ DVV+GTAL+DMY
Sbjct: 155 EMQMLGVND-VRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMY 213
Query: 319 GKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
KCG VE+A VF + P KD +AW+AMIS A++G +E F +M +GVRPN VTF
Sbjct: 214 AKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTF 273
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+ + AC H GLV +G+ M Y + P + HY CM+D+ RAG EA +++SMP
Sbjct: 274 LAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMP 333
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
MEPDV VWGALL G +MHG++E E + LI+L+P N YV L ++YAK GR++DV+
Sbjct: 334 MEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRH 393
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R+LM+ GI+K VPGCS +EV GV+HEF + ++ ++L + + +K G+
Sbjct: 394 VRDLMETMGIKK-VPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGY 450
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/431 (41%), Positives = 275/431 (63%), Gaps = 5/431 (1%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMA 184
+ M+ TG+ P +T+ +L C K +G V+ VV GV D+ V N++I ++
Sbjct: 111 FVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAE 170
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
C + +A LF+ M R+ VSW ++I G+LR G +D A LF M +R+ SW ++I G+
Sbjct: 171 CSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGY 230
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
VQ G+ REALE+F+EMQ S V + D+ T+ SV++ACA LGA++ G+W Y+ R G+
Sbjct: 231 VQAGQFREALEMFREMQFSKV----RADEFTMVSVVTACAQLGALETGEWARIYMSRHGI 286
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
D +G ALVDMY KCG +++A GVFKEM +D WTA+I A+NG+G+EA + F
Sbjct: 287 KMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYR 346
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
M P+ VTF+G+L+AC H+GLV+KGR F+ M Y + P+V H+ C+ID+L RAG
Sbjct: 347 MLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAG 406
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
EA I +MPM P+ +WG LL C++HGN E+G+ A++L++LD N Y+ L +
Sbjct: 407 KLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSN 466
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
+YAK+ R++DV++ R ++ E+GI+KE PGCS +E++G +HEF + +E+ L+
Sbjct: 467 LYAKSNRWEDVRRLRQVIMEKGIKKE-PGCSLIEMNGTIHEFIAGDRSHPMSKEIYSKLD 525
Query: 545 GLSKIMKNGGF 555
+ +K+ G+
Sbjct: 526 KVLTDLKDAGY 536
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 175/371 (47%), Gaps = 68/371 (18%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLD-GLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L++Y ML G PD TFP LLK T + G VG +V+ VVKFG+ + V +S++
Sbjct: 3 LRVYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVL 62
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
++ A G AR L D +W A R GD V WN++
Sbjct: 63 MYAARGDGAVARTLLD--------AWPA------RGGDTPVV--------------WNAL 94
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
I+G + + R + F +M V V P +T +VLSAC I G VH +
Sbjct: 95 ISGHRRSRQFRLSCCSFVDM----VRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVV 150
Query: 301 RSGLDCDVVIGTALVDMYGKC-------------------------------GCVERAYG 329
SG+ D+ +G AL+DMY +C G V++A
Sbjct: 151 ASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQART 210
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
+F MP++DT++WTAMI + G +EA + FREM+ VR + T V +++ACA G
Sbjct: 211 LFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGA 270
Query: 390 VEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+E G W + M RH ++ V + ++D+ S+ G +A + + M + D F W A+
Sbjct: 271 LETGEWARIYMSRHGIKMDTFVGN--ALVDMYSKCGSIQQALGVFKEMYIR-DKFTWTAV 327
Query: 449 LGGCQMHGNVE 459
+ G ++G+ E
Sbjct: 328 ILGLAVNGHGE 338
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/523 (35%), Positives = 305/523 (58%), Gaps = 15/523 (2%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ CK+ R++K++H ++I + + H + T L S+ +SYA VF H +
Sbjct: 8 LSSCKSFRQIKQVHARLITTGLIL----HPIPTNKLLKQLSSIFAPISYAHMVFDHFPQP 63
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
DL+ YN +I+ A ++ + D+ + K + + P+ +F F K C + L
Sbjct: 64 DLFLYNTIIKVLAFSTTSSADSFT----KFRSLIREERLVPNQYSFAFAFKGCGSGVGVL 119
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G V +K G+ +++FV N++I +++ FV AR +FD NRD+ SWN M+ GY
Sbjct: 120 EGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYA 179
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
R G +D A LF M ++++ SW ++I+G +Q G EAL++F M + + P++
Sbjct: 180 RLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMS----PNEY 235
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+AS L+ACA L A+D G+W+H Y++++ + + + L+DMY KCG +E A +F
Sbjct: 236 TLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSN 295
Query: 335 P--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
P K+ W AMI FA++G KEA + F +M+ E V PN VTFV LL+AC+H VE+
Sbjct: 296 PRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEE 355
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
GR+ F M Y V+P + HY C++D+L RAG EAE +I SM + PDV +WGALL C
Sbjct: 356 GRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSAC 415
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
++H + E+GE+V + + +LDP + +V L ++Y+ G +++ + R + E G +K+ P
Sbjct: 416 KIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESG-KKKTP 474
Query: 513 GCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
GCSS+E++G+ H+F + ++L L L+ + +K G+
Sbjct: 475 GCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGY 517
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/496 (40%), Positives = 295/496 (59%), Gaps = 20/496 (4%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSY 83
+E+ + ILR+ + K +L +IH I++ Q+N +++ + C + Y
Sbjct: 6 REAERRILRH-LHGRKTRTQLPQIHAHILRHHLHQSN---QILSHFISVCG--ALDKMGY 59
Query: 84 ATNVFSHIKRSDLYTYNIMIRA-NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPF 142
A VF + +L +N MI+ + C SE + L L+ QM GI PD TF
Sbjct: 60 ANLVFHQTQNPNLLLFNSMIKGYSLCGPSENS-------LLLFSQMKNRGIWPDEFTFAP 112
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
LLK C+ D +G V+G V+ G ++ +I L+ +CG + A+ +FDEM +RD
Sbjct: 113 LLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRD 172
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
V+ WN MI G+ + GD+++ LFR+M+ R++ SWNS+I G Q GR EALELF+EM
Sbjct: 173 VIVWNMMIRGFCKVGDIEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWD 232
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV-IGTALVDMYGKC 321
E PD T+ ++L CA LGA+D G+W+H Y S L D + +G +LVD Y KC
Sbjct: 233 HGFE----PDDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKC 288
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G +E A+ VF EMP+K+ ++W AMIS NG G+ D F EM +GVRPN TFVG+L
Sbjct: 289 GILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVL 348
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
S CAH+GLVE+GR F M + +EP + H+ CM+D+L+R G EA L+R+MPM P+
Sbjct: 349 SCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPN 408
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+WG+LL + G+V+ E + LI+L+P N YV L ++YA+ G++D+V+K R L
Sbjct: 409 AVLWGSLLSAYRTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRAL 468
Query: 502 MKERGIRKEVPGCSSV 517
MKE+ IRK PG S V
Sbjct: 469 MKEKNIRKN-PGQSMV 483
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/520 (38%), Positives = 304/520 (58%), Gaps = 25/520 (4%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK 92
+ + + ++ LK++ + T H +L+ FC L++S +L+YA +F HI
Sbjct: 11 DTLSKSNHLNHLKQLQAYLTTLGHAHT---HFYAFKLIRFCTLTLS-NLTYARLIFDHIP 66
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLTFPFLLKECTKRL 151
+ + + MI A A + TH L L++ ML P+ FP LK C
Sbjct: 67 SLNTHLFTAMITAYAAHPA----THP-SALSLFRHMLRSQPPRPNHFIFPHALKTCP--- 118
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLF-MACGFVTSARMLFDEMSNRDVVSWNAMI 210
+ S++ Q+VK G + VQ +++ + G + +A+ +FDEMS+R VVS+ AM+
Sbjct: 119 ESCAAESLHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMSDRSVVSFTAMV 178
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
G+ R GD++ A+ +F M R++ SWN++I G Q G + +ELF+ M V E +
Sbjct: 179 SGFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRM----VFECNR 234
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
P+ +T+ LSAC ++G + G+W+HGY+ ++GL D + ALVDMYGKCG + +A V
Sbjct: 235 PNGVTVVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKV 294
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM--EAEGVRPNHVTFVGLLSACAHSG 388
F+ P+K +W +MI+ FAL+G A F +M GVRP+ VTFVGLL+AC H G
Sbjct: 295 FEMNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGG 354
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
LVEKG W F MM Y +EP + HY C+ID+L RAG F EA +++ M MEPD VWG+L
Sbjct: 355 LVEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSL 414
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
L GC++HG +L E A+ LI++DP N + + L ++Y + G++D+V+ +K++
Sbjct: 415 LNGCKVHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSY 474
Query: 509 KEVPGCSSVEVDGVVHEFSM--KGSPKVVKEELVLILNGL 546
K VPGCS +EVD VH+F K +PK E+L ++L L
Sbjct: 475 K-VPGCSWIEVDDQVHQFYSLDKSNPKT--EDLYIVLESL 511
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 150/370 (40%), Gaps = 66/370 (17%)
Query: 11 SLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL 70
SL + PP I +A+ C + +H QI+KS + + ++ L
Sbjct: 92 SLFRHMLRSQPP--RPNHFIFPHALKTCPESCAAESLHAQIVKSGFHE----YPVVQTAL 145
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA------------------------- 105
VSG L A VF + + ++ M+
Sbjct: 146 VDSYSKVSGGLGNAKKVFDEMSDRSVVSFTAMVSGFARVGDVESAVRVFGEMLDRDVPSW 205
Query: 106 NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVK 165
NA + T + + ++L+++M+ P+ +T L C +G ++G V K
Sbjct: 206 NALIAGCTQNGAFTQGIELFRRMVFECNRPNGVTVVCALSACGHMGMLQLGRWIHGYVYK 265
Query: 166 FGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDL 225
G+ D FV N+++ ++ CG + AR +F+ + + SWN+MI + G D A+ +
Sbjct: 266 NGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPEKGLTSWNSMINCFALHGQSDSAIAI 325
Query: 226 FRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY 285
F +M V+GG V+PD++T +L+AC +
Sbjct: 326 FEQM---------------VEGGGG------------------VRPDEVTFVGLLNACTH 352
Query: 286 LGAIDHGKWVHGYL-RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWT 343
G ++ G W + + G++ + L+D+ G+ G + A V K M + D + W
Sbjct: 353 GGLVEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWG 412
Query: 344 AMISVFALNG 353
++++ ++G
Sbjct: 413 SLLNGCKVHG 422
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 174/405 (42%), Positives = 260/405 (64%), Gaps = 4/405 (0%)
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
L G +G ++ +V+ G+ D V S+I + +CG V SAR +FD+ +++D+ WN MI
Sbjct: 83 LRGTLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMI 142
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY++SG+L A +LF M RN+ SW ++I + Q + EA+E+F+ MQ VEE ++
Sbjct: 143 SGYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQ---VEEGIE 199
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD + + SVLSAC LGA+D G+WVH ++ R GL + + A++DMY K GCV +A V
Sbjct: 200 PDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEV 259
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F+ M +K + WT +I+ FAL+G G EA + FR ME E V PN VTF+ +LSAC+H GL
Sbjct: 260 FEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLT 319
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
+ GRW F +M Y ++ V HY CM+D+L RAG EA+ L++ MP + + +WGALL
Sbjct: 320 DLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLA 379
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
+ HG+ ELG++ +LI+L+P N Y+ L ++YA+ R+DDV K R MK+RG+R
Sbjct: 380 AARTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLRN- 438
Query: 511 VPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
VPG SS+EVDG+VHEF+ + ++ +L ++ MK+ F
Sbjct: 439 VPGASSIEVDGMVHEFTSRDGSHPCLHKICKVLCEITTDMKSISF 483
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 191/520 (36%), Positives = 301/520 (57%), Gaps = 23/520 (4%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ CKN+ ELK IH +IK Q++ L+T+++ C + L YA+ +F +K
Sbjct: 21 LQNCKNIVELKSIHAHVIKYSLSQSS---FLVTKMVDVC--DKTEDLGYASLLFKQVKEP 75
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-------TGISPDCLTFPFLLKEC 147
+ Y YN MIRA+ T++ + YK+ML I PD TFPF++K C
Sbjct: 76 NGYLYNAMIRAH------THNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSC 129
Query: 148 TKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWN 207
+ + +G V+ + KFG ++ ++N++I ++ C + A +FD M RD +SWN
Sbjct: 130 SGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWN 189
Query: 208 AMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
++I G++ G + A LF M R I SW ++I+G+ + G +AL +F++MQ VE
Sbjct: 190 SIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVE- 248
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
PD+I+I SVL ACA LGA++ GKW+H Y R+GL I AL++MY KCGC+ +A
Sbjct: 249 ---PDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQA 305
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
Y +F +M K D ++W+ MI A +G +EA + F+ M+ + PN +TF+GLLSACAH+
Sbjct: 306 YQLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHA 365
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
G +G F M Y +EP V HY C++DIL RAG S+A +I MPM+PD +WG+
Sbjct: 366 GFWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGS 425
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
LL C+ H N+++ ++L +L+P + YV L ++YA ++D V + R L+K + +
Sbjct: 426 LLSSCRTHSNLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSM 485
Query: 508 RKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
+K PG S ++++ VV EF K ++ +L L+
Sbjct: 486 KK-TPGSSLIDINNVVQEFVSWDDSKPFSRDIFWLLELLT 524
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 318/600 (53%), Gaps = 87/600 (14%)
Query: 26 STKLILRNAIDECKNM-RELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYA 84
S L ++N + N +LK IH ++++ Q N + L+ CAL GS +Y+
Sbjct: 13 SKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDN----YLLNLILCCALDF-GSTNYS 67
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
VFS +K +++ +N MIR K + H LY M G P+ T PF+L
Sbjct: 68 KLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIH------LYGSMRGGGFLPNNFTIPFVL 121
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
K C ++LD +G ++ +VK G DVFV+ S++SL++ C A +FD++ +++VV
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKK--------------------------------- 231
SW A+I GY+ SG A+ F+++ +
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241
Query: 232 ------RNIFSWNSIITGFVQGGR-------------------------------AREAL 254
RN+F S++ +V+ G ++AL
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
+LF +MQS E +KPD T+ VLSACA LGA+D G W + R+ + V+GTAL
Sbjct: 302 DLFFQMQS----ENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTAL 357
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+DMY KCG V +A+ +F M KKD + W AM+ ++NG+ K F F +E G+RP+
Sbjct: 358 IDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDE 417
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
TF+GLL C H G V +GR F M+ V+ + P + HY CM+D+L RAGL +EA +LI
Sbjct: 418 NTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLIN 477
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
+MPM+P+ VWGALLGGC++H + L E+V + LI+L+P N YV L ++Y+ R+++
Sbjct: 478 NMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEE 537
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
+K R+ MKE+ I+K + CS +E+DG+VHEF + + E++ L+ L + +K G
Sbjct: 538 AEKIRSTMKEQQIQK-IRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVG 596
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 315/559 (56%), Gaps = 49/559 (8%)
Query: 30 ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
+L+NA + ++ +IH IIK+ N + + R LF C S + L YA +VF
Sbjct: 9 LLQNA----TKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFAC--SSANDLLYARSVFD 62
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP-DCLTFPFLLKECT 148
I D + +N MIRA N + + + L+ QM P D + +++ C
Sbjct: 63 EIPSPDTFIWNTMIRA------YLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACG 116
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+ D G ++ QV+K G+ D+FV+ ++I ++ G + AR + DEM++ D+V +N
Sbjct: 117 RLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNV 176
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG------------------------- 243
++ Y+R G++++A DLF RM +R++ SWN++I G
Sbjct: 177 LLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISW 236
Query: 244 ------FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
+ + ++ EAL LF EMQ ++ V PDK+T+ SVLSAC +GA+ GK +H
Sbjct: 237 SSMIAAYAKARQSNEALRLFHEMQLAN----VLPDKVTMVSVLSACGDVGALGMGKMIHE 292
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
+ R+ ++ D+ +GT+LVDMY KCG ++ + VF M +D AW+AMI A +G+G+
Sbjct: 293 CIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGEL 352
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
A D F +M +E ++PN VTF+G+LSAC+H GLV++G F M VY V P + HY C++
Sbjct: 353 ALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVV 412
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
DIL RAG EA LI+SMP PD VW ALLG C+++ NVE+ E+ L++L+P
Sbjct: 413 DILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDG 472
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKE 537
YV L ++Y++A +D V R +MK I+K VPG SS+EVD VHEF +
Sbjct: 473 NYVLLSNIYSQAKEWDKVVNVRRMMKNINIQK-VPGSSSIEVDNAVHEFVAGDQSHPESK 531
Query: 538 ELVLILNGLSKIMKNGGFG 556
+++ +L+ ++ +K G+
Sbjct: 532 KILRMLSEITARLKANGYA 550
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/472 (38%), Positives = 294/472 (62%), Gaps = 11/472 (2%)
Query: 85 TNVFS-HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
T +F+ ++ +++++++N +I A +S + S + L+ + M + P+ TFP
Sbjct: 29 TTLFNKYVDKTNVFSWNSVI-AELARSGD-----SVEALRAFSSMRKLSLKPNRSTFPCA 82
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
+K C+ LD G + Q + FG D+FV ++++ ++ CG + AR LFDE+S+R++
Sbjct: 83 IKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNI 142
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
VSW +MI GY+++ D AL +F M +R++ SWNSII + Q G + E++E+F M
Sbjct: 143 VSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKD 202
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
+ + +T+++VL ACA+ G+ GK +H + + GL+ +V +GT+++DMY KCG
Sbjct: 203 G---EINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGK 259
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
VE A F M +K+ +W+AM++ + ++G+ KEA + F EM GV+PN++TFV +L+A
Sbjct: 260 VEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAA 319
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+H+GL+E+G F M H + VEP V HY CM+D+L RAG EA LI+ M + PD
Sbjct: 320 CSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFV 379
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
VWGALLG C+MH NV+LGE A+ L +LDP N +YV L ++YA AGR++DV++ R LMK
Sbjct: 380 VWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMK 439
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G+ K PG S V++ G VH F + E++ L LS ++ G+
Sbjct: 440 NSGLVKP-PGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGY 490
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/615 (33%), Positives = 325/615 (52%), Gaps = 91/615 (14%)
Query: 11 SLLNSPAKVSPPNKESTKLILRNAIDECKNM-RELKEIHTQIIKSPCLQTNDHHSLITRL 69
++L SP SP S L ++N + N +LK IH ++++ Q N + L
Sbjct: 2 TILTSPT--SPV--FSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDN----YLLNL 53
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
+ CAL GS +Y+ VFS +K +++ +N MIR K + H LY M
Sbjct: 54 ILCCALDF-GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIH------LYGSMR 106
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
G P+ T PF+LK C ++LD +G ++ +VK G DVFV+ S++SL++ C
Sbjct: 107 GGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFD 166
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK------------------ 231
A +FD++ +++VVSW A+I GY+ SG A+ F+++ +
Sbjct: 167 DALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACA 226
Query: 232 ---------------------RNIFSWNSIITGFVQGGR--------------------- 249
RN+F S++ +V+ G
Sbjct: 227 RLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWST 286
Query: 250 ----------AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
++AL+LF +MQS E +KPD T+ VLSACA LGA+D G W +
Sbjct: 287 MIQGYAFNGLPQQALDLFFQMQS----ENLKPDCYTMVGVLSACATLGALDLGIWASSLM 342
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
R+ + V+GTAL+DMY KCG V +A+ +F M +KD + W AM+ ++NG+ K F
Sbjct: 343 DRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVF 402
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
F +E G+RP+ TF+GLL C H G V +GR F M+ V+ + P + HY CM+D+
Sbjct: 403 SLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDL 462
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFY 479
L RAGL +EA +LI +MPM+P+ VWGALLGGC++H + L E+V + LI+L+P N Y
Sbjct: 463 LGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNY 522
Query: 480 VNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEEL 539
V L ++Y+ R+++ +K R+ MKE+ I+K + CS +E+DG+VHEF + + E++
Sbjct: 523 VQLSNIYSGNHRWEEAEKIRSTMKEQQIQK-IRACSWIEIDGIVHEFLVGDKSHWLSEKI 581
Query: 540 VLILNGLSKIMKNGG 554
L+ L + +K G
Sbjct: 582 YAKLDELGRELKAVG 596
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/451 (40%), Positives = 275/451 (60%), Gaps = 11/451 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L +A +F + DL ++N +I C S+ N + L+L+ M I D +
Sbjct: 165 GQLGFAQKMFDGMLDRDLVSWNTLI----CGYSQYNKY--KEVLRLFDAMTAANIKADAV 218
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T ++ C+ D S+ + + + DV++ N++I ++ A+ +FD M
Sbjct: 219 TMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRM 278
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
R++VSWNA+++G+ + G+L A LF M KR++ SW S+ITG+ Q + +A++LFQ
Sbjct: 279 RERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQ 338
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM ++ V KPDK+T+ASVLSACA+LG +D G VH Y+RR G+ D+ +G +L+DMY
Sbjct: 339 EMMAAKV----KPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMY 394
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG VE+A VF M KD+++WT++IS A+NG+ A D F +M EGV+P H TFV
Sbjct: 395 CKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFV 454
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L ACAH+GLV KG F M V+ + P + HY C++D+LSR+G +A I+ MP+
Sbjct: 455 GILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPI 514
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
PDV VW LL C++HGNV L E + L++LDP + YV L + YA R+DD K
Sbjct: 515 VPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKM 574
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMK 529
R LM++ ++K G SS+EVDG+V +S +
Sbjct: 575 RELMEDSDVQKP-SGSSSIEVDGMVSNYSQE 604
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 202/443 (45%), Gaps = 78/443 (17%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
KE+H +I++ Q + L++ ++ +LS S +L A VF+ I+ L +N MIR
Sbjct: 34 KELHAHLIRT---QLHTDPFLMSDVIRSYSLS-STNLHKAHLVFNQIECPTLVVWNHMIR 89
Query: 105 ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVV 164
+ H + + +Y +M GI+ + LT FL K C + D + G ++ +
Sbjct: 90 G------LSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHAL 143
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
K G +FV N++I ++ CG L A
Sbjct: 144 KLGFESYLFVSNALIHMYAMCG-------------------------------QLGFAQK 172
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
+F M R++ SWN++I G+ Q + +E L LF M +++ +K D +T+ ++ AC+
Sbjct: 173 MFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAAN----IKADAVTMVKIILACS 228
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV-------------- 330
+LG + + Y++ + L+ DV +G L+DMYG+ E A GV
Sbjct: 229 HLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNA 288
Query: 331 -----------------FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
F MPK+D ++WT+MI+ ++ +A F+EM A V+P+
Sbjct: 289 LVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPD 348
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
VT +LSACAH G ++ G W + V+ +Y +ID+ + G+ +A +
Sbjct: 349 KVTVASVLSACAHLGKLDVG-WAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVF 407
Query: 434 RSMPMEPDVFVWGALLGGCQMHG 456
M + D W +++ G ++G
Sbjct: 408 HRMK-DKDSVSWTSVISGLAVNG 429
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 140/308 (45%), Gaps = 17/308 (5%)
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
L S +L A +F +++ + WN +I G Q EA+ ++ M + + +
Sbjct: 61 LSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMH----HQGITGNN 116
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+T+ + ACA + I G+ +H + + G + + + AL+ MY CG + A +F
Sbjct: 117 LTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDG 176
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M +D ++W +I ++ KE F M A ++ + VT V ++ AC+H G
Sbjct: 177 MLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSH-----LG 231
Query: 394 RWCFV--MMRHVYL--VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
W F M++++ +E VY +ID+ R L A+ + M E ++ W AL+
Sbjct: 232 DWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMR-ERNIVSWNALV 290
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G GN+ K+ + D ++ + ++ Y++A +F D K M ++
Sbjct: 291 MGHAKVGNLTAARKLFDNMPKRDVIS---WTSMITGYSQASQFSDAVKLFQEMMAAKVKP 347
Query: 510 EVPGCSSV 517
+ +SV
Sbjct: 348 DKVTVASV 355
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/516 (37%), Positives = 298/516 (57%), Gaps = 25/516 (4%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M ELK+ H +IK Q+N L+T+++ C + + YA+ +F + + Y YN
Sbjct: 1 MAELKKNHALVIKYALSQSN---FLVTKMIDVC--DRNEDMDYASFLFKEVIDPNAYLYN 55
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTG---------ISPDCLTFPFLLKECTKRL 151
MIRA C T+++ + YKQML I PD TFPF++K C +
Sbjct: 56 AMIRA--C----THNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLG 109
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
+G V+ Q KFG + +N++I ++ C + A LFDEM R +SWN +I
Sbjct: 110 LHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIIS 169
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
G++R G + A LF M R I SW +II+G+ + G +AL++F+EMQ + +E P
Sbjct: 170 GHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIE----P 225
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
D+ +I SVL ACA LGA++ GKW+H + R+GL I AL++MY KCGC+++A +F
Sbjct: 226 DEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLF 285
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+M +D ++W+ MI A +G +EA F M+ ++PN +TFVGLLSACAH+G E
Sbjct: 286 DQMRGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWE 345
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+G F M+ + +EP + HY ++D+L RAG S+A ++ MPM+PD +WG+LL
Sbjct: 346 EGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSS 405
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C+ H N+E+ ++L +L+P + YV L ++YA G++DDV + R L++ + ++K
Sbjct: 406 CRTHCNIEVAVIAMEHLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKK-T 464
Query: 512 PGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
PGCS +EV+ V EF K +E+ +L L+
Sbjct: 465 PGCSLIEVNNVAQEFVSGDDSKPYSKEIFWLLELLA 500
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/539 (35%), Positives = 312/539 (57%), Gaps = 23/539 (4%)
Query: 18 KVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV 77
++ PP K L ID+ +++ E+ +IH I++ L + L L A +
Sbjct: 25 RLPPPEK------LAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVL--NLKLHRAYAS 76
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G + ++ +F DL+ + I N + D + LY Q+L + I+P+
Sbjct: 77 HGKIRHSLALFHQTIDPDLFLFTAAI--NTASINGLKD----QAFLLYVQLLSSEINPNE 130
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
TF LLK C+ + G ++ V+KFG+ D +V ++ ++ G V SA+ +FD
Sbjct: 131 FTFSSLLKSCSTK----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDR 186
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M R +VS AMI Y + G+++ A LF M +R+I SWN +I G+ Q G +AL LF
Sbjct: 187 MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
Q++ + E KPD+IT+ + LSAC+ +GA++ G+W+H +++ S + +V + T L+DM
Sbjct: 247 QKLLA---EGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDM 303
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA-EGVRPNHVT 376
Y KCG +E A VF + P+KD +AW AMI+ +A++GY ++A F EM+ G++P +T
Sbjct: 304 YSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDIT 363
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
F+G L ACAH+GLV +G F M Y ++P + HY C++ +L RAG A I++M
Sbjct: 364 FIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNM 423
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
M+ D +W ++LG C++HG+ LG+++A+YLI L+ N YV L ++YA G ++ V
Sbjct: 424 NMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVA 483
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K RNLMKE+GI KE PG S++E++ VHEF +E+ +L +S+ +K+ G+
Sbjct: 484 KVRNLMKEKGIVKE-PGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGY 541
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/490 (39%), Positives = 293/490 (59%), Gaps = 20/490 (4%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
E N+ E K I+ Q+ + + +N S+I +LF + G + A +F + D+
Sbjct: 291 EIGNVEEAKHIYHQMPERSIIASN---SMI--VLF----GMRGLVVEACKLFDEMLEKDM 341
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
T++ +I AC + N+ + + ++ + M G+ D + L C L +G
Sbjct: 342 VTWSALI---AC--FQQNEMYE-EAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 395
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++ +K G + +QN++I ++ CG + AR LFDE D++SWN+MI GYL+
Sbjct: 396 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 455
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
+D A +F M ++++ SW+S+I+G+ Q E L LFQEMQ S KPD+ T+
Sbjct: 456 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGF----KPDETTL 511
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
SV+SACA L A++ GKWVH Y++R+GL +V++GT L+DMY KCGCVE A VF M +
Sbjct: 512 VSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIE 571
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
K W A+I A+NG + + D F M+ V PN +TF+G+L AC H GLV++G+
Sbjct: 572 KGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHH 631
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F M H + ++P+V HY CM+D+L RAG EAE L+ MPM PDV WGALLG C+ HG
Sbjct: 632 FYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHG 691
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
+ E+G +V + LI+L P + F+V L ++YA G++DDV + R +M + + K +PGCS
Sbjct: 692 DSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLK-IPGCSM 750
Query: 517 VEVDGVVHEF 526
+E +GV+HEF
Sbjct: 751 IEANGVIHEF 760
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 197/420 (46%), Gaps = 62/420 (14%)
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
T+ + +A+ +TN H LYK ML + D T+P L++ C+ R
Sbjct: 176 TWKMPAKASRRAYIQTNSPHFA--FTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAK 233
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
V+ V+K G DV+V+N++I+ F C +T A +F+E S D VSWN+++ GY+ G
Sbjct: 234 QVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIG 293
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM----------------Q 261
+++ A ++ +M +R+I + NS+I F G EA +LF EM Q
Sbjct: 294 NVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQ 353
Query: 262 SSSVEEMVKP-----------DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
+ EE ++ D++ S LSACA L ++ GK +H + G + + +
Sbjct: 354 NEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINL 413
Query: 311 GTALVDMYGKCG-------------------------------CVERAYGVFKEMPKKDT 339
AL+ MY KCG V+ A +F MP+KD
Sbjct: 414 QNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDV 473
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++W++MIS +A N E F+EM+ G +P+ T V ++SACA +E+G+W
Sbjct: 474 VSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAY 533
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
++ L +V +ID+ + G A + M +E + W AL+ G M+G VE
Sbjct: 534 IKRNGLT-INVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALILGLAMNGLVE 591
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/428 (40%), Positives = 265/428 (61%), Gaps = 5/428 (1%)
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
M+ G+ P+ T ++K C G + ++K G DV VQ +++ ++ CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+ A +FD+MS R +WNAMI G+ ++ D+ AL LF M +R++ SW ++I G+ Q
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
G E+L +F +M+ + + K D+ + SVLSACA L A++ G+ H Y+ +SG D
Sbjct: 121 GYGDESLNVFNQMRKTGM----KSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALD 176
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+V+G+ALVDMY K G +E A VF +MP+++ ++W ++I+ A +G G +A F +M
Sbjct: 177 IVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQ 236
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
G++PN ++FVG+LSAC+H+GLV +GR F +M Y + P V HY CMID+L RAG
Sbjct: 237 AGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLD 296
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
EAE I MP+EPDV VWGALLG C++HGN EL +++A++L+ ++ YV L ++YA
Sbjct: 297 EAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYA 356
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
AG++DD K R LMK+RG+ K+ PG S +EV ++H F + +E+ L LS
Sbjct: 357 AAGQWDDAAKVRKLMKDRGVMKQ-PGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLS 415
Query: 548 KIMKNGGF 555
+ MK G+
Sbjct: 416 RKMKAAGY 423
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 149/362 (41%), Gaps = 74/362 (20%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PN+ + +++ A ++ + K+ H IIK ++ + + GSL
Sbjct: 8 PNQFTLSTVVK-ACASIASLEQGKQAHNYIIK-----MGFESDVVVQTALVHMYARCGSL 61
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACK-------------------------SSETNDT 116
A +VF + T+N MI +A + +
Sbjct: 62 EDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNG 121
Query: 117 HSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQN 176
+ + L ++ QM TG+ D +L C +G + VV+ G D+ V +
Sbjct: 122 YGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGS 181
Query: 177 SVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFS 236
+++ ++ G + A +FD+M R+ VSWN++I
Sbjct: 182 ALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSII-------------------------- 215
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
TG Q GR +A+ LF++M ++ +KP++I+ VLSAC++ G ++ G+
Sbjct: 216 -----TGCAQHGRGNDAVLLFEQM----LQAGIKPNEISFVGVLSACSHTGLVNEGR--- 263
Query: 297 GYL----RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFAL 351
GY + G+ DV T ++D+ G+ GC++ A MP + D W A++ +
Sbjct: 264 GYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRI 323
Query: 352 NG 353
+G
Sbjct: 324 HG 325
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 205/550 (37%), Positives = 310/550 (56%), Gaps = 58/550 (10%)
Query: 18 KVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCA-LS 76
+ P K+S L ++ CK + +LK++H QI K+ Q S +T+L+ A ++
Sbjct: 18 EADPMTKDSC---LNESLRCCKTLNQLKQLHCQITKNGLDQIP---STLTKLVNAGAEIA 71
Query: 77 VSGSLSYATNVFSHIK---RSD--LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
SL YA F K RSD L+ N +IR + + + LY +ML
Sbjct: 72 SPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGL------GREAILLYVRMLVL 125
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
G++P+ TFPF+L CTK G V+G VVK G+ +DVF+QN +I + CG +
Sbjct: 126 GVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHG 185
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRS-----------------------------GDLDVA 222
+F+ MS R+VVSW ++I GY R G +D A
Sbjct: 186 HKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAA 245
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
LF RN+ +N+I++ + + G AREAL + EM +++ +PD++T+ S +SA
Sbjct: 246 KRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEM----LQQGPRPDRVTMLSAISA 301
Query: 283 CAYL-----GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
A L G + HG WVH Y+ ++G+ CD+ + TALVDM+ +CG + A VF +M ++
Sbjct: 302 SAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTER 361
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
D AWTA I A+ G G+ A F +M +GV+P+ V FV +L+AC+H G VE+G F
Sbjct: 362 DVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF 421
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+M + + P + HY CM+D+L RAGL EA LI+SMPMEP+ VWG+LL C++H N
Sbjct: 422 SLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKN 480
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
VE+ A+ + +L P +V L ++YA AG++ DV + R ++E+G+RK VPG SSV
Sbjct: 481 VEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRK-VPGSSSV 539
Query: 518 EVDGVVHEFS 527
+V+GV+HEF+
Sbjct: 540 QVNGVIHEFT 549
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 196/536 (36%), Positives = 306/536 (57%), Gaps = 46/536 (8%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS-VSG 79
PPN S + + +C ++RELK++ IK+ + S++T+ + FC+L+ +
Sbjct: 13 PPNSNSNTTHPLSLLPKCTSLRELKQLQAFAIKT---HLHSDLSVLTKFINFCSLNPTTT 69
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
S+ +A ++F I + D+ +N M R A + + L+ Q+L +G+ PD T
Sbjct: 70 SMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPL------RAFTLFTQILFSGLFPDDYT 123
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
FP LLK C G ++ +K G+ ++V+V ++I+++ AC + AR +FD++
Sbjct: 124 FPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKI- 182
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
W ++ Y N++ITG+ +G R EAL LF+E
Sbjct: 183 ------WEPCVVTY------------------------NAMITGYARGSRPNEALSLFRE 212
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
+Q+ ++ KP +T+ SVLS+CA LGA+D GKW+H Y++++G + V + TAL+DMY
Sbjct: 213 LQARNL----KPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYA 268
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG ++ A VF+ M +DT AW+AMI +A++G+G +A F+EM G P+ +TF+G
Sbjct: 269 KCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLG 328
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
LL AC+H+GLVE+G F MR Y V P + HY CM+D+L RAG EA I +P+
Sbjct: 329 LLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIR 388
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
P +W LL C HGNVELG++V + + +LD + Y+ L ++ A+AGR++DV R
Sbjct: 389 PTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVR 448
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
LM ERG+ K +PGCSSVEV+ VVHEF V +L L+ L K +K G+
Sbjct: 449 KLMNERGVVK-IPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGY 503
>gi|224058579|ref|XP_002299552.1| predicted protein [Populus trichocarpa]
gi|222846810|gb|EEE84357.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 190/497 (38%), Positives = 302/497 (60%), Gaps = 28/497 (5%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
++ CK E ++H ++ K L + +TRLL + ++S +++YA ++F+ K
Sbjct: 32 LEICKFTTEFAQLHARLTK---LGFIKNPLALTRLLCYSSISQYANINYAQSIFNFDKNP 88
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDG 153
+ + YN+MIR A + N L L+ MLC S + LTFPF+LK C++
Sbjct: 89 NTFAYNVMIRGYAQREKPEN------ALSLFYSMLCNANSGQNKLTFPFVLKACSQVRAI 142
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G V+G V K G+ +D+FVQNS+IS++ +CG + A +F+++ + DVVSWN+MI G
Sbjct: 143 EEGKQVHGLVFKHGLSEDLFVQNSLISMYSSCGLIGFACQVFNKIDDPDVVSWNSMISGL 202
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
+ G ++ +F RM KR++ +WN +I G+V+ G EA ELF +M +
Sbjct: 203 VDLGFVEEGKQMFDRMSKRSLVTWNCLIDGYVKAGLLMEARELFDQM------------R 250
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
T+ SVL+AC+YLGA++ G+W+ ++ ++G+D + V+GTALV+M+ KCG +ERA VFK
Sbjct: 251 FTMVSVLTACSYLGALEQGEWMQAHIEKNGIDVNSVLGTALVEMFAKCGSIERALSVFKS 310
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
+ ++D AW ++I A +G+G+EAF F +M + + F+GLLS C H GLV++G
Sbjct: 311 IEERDVGAWNSIIHKLAAHGHGQEAFAIFSDMLRSNTLLDGIIFLGLLSVCRHLGLVDEG 370
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS---MPMEPDVFVWGALLG 450
+ F +M Y + P V HY CM+D+L A L EA LI S M+ V +WGALLG
Sbjct: 371 KRFFQLMSEEYGLVPKVEHYGCMVDLLCHADLLEEARDLIDSSHASQMKSSVPMWGALLG 430
Query: 451 -GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
CQ+ N+ +GE A++L+ LDP + Y L ++Y+ AG ++ + RN MK++G+ K
Sbjct: 431 VSCQLK-NIVMGEYAAKHLLQLDPFDGNCYTVLSNLYSAAGLYEKAIEVRNEMKKQGLEK 489
Query: 510 EVPGCSSVEVDGVVHEF 526
+PG SS+E+DG+V +F
Sbjct: 490 -IPGSSSMEIDGLVLDF 505
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 185/473 (39%), Positives = 279/473 (58%), Gaps = 26/473 (5%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A +F DL ++N MI + + + L Y++M GI PD +
Sbjct: 128 GDLDGARKMFDKSCVRDLVSWNSMINGYVRRG------WAYEALNFYREMKVEGIKPDEV 181
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T ++ C + D +G + + + G+ V + N+++ ++M CG + SAR LFD M
Sbjct: 182 TMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSM 241
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+N+ +VSW M LF M +++ WN++I G+V R +EAL LF
Sbjct: 242 TNKTMVSWTTM---------------LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFN 286
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ+ ++ PD++T+ S LSAC+ LGA+D G W+H Y+ + L +V +GTAL+DMY
Sbjct: 287 EMQAMNI----NPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMY 342
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + +A VF+E+P +++L WTA+IS AL+G A F EM V P+ VTF+
Sbjct: 343 AKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFL 402
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
GLLSAC H GLVE+GR F M + + P + HY+CM+D+L RAGL EAE LI+SMP+
Sbjct: 403 GLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPI 462
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
E D VWGAL C++HGNV +GE+ A L+ +DP + YV L +MY +A + + K
Sbjct: 463 EADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKX 522
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
R LM++RG+ K PGCSS+EV+G+V+EF ++ E++ L L++ ++
Sbjct: 523 RKLMRQRGVEK-TPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLE 574
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 205/413 (49%), Gaps = 70/413 (16%)
Query: 67 TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYK 126
+RL+ FCA+S L Y TN+ + + + +++N+ IR + + + + LYK
Sbjct: 14 SRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGF------LDSENPREAVVLYK 67
Query: 127 QML-CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
++L C G PD T+P L K C + +G+ + G V+ G D+FV N+VI L ++C
Sbjct: 68 RVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSC 127
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
G DLD A +F + R++ SWNS+I G+V
Sbjct: 128 G-------------------------------DLDGARKMFDKSCVRDLVSWNSMINGYV 156
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
+ G A EAL ++EM+ E +KPD++T+ V+S+CA L +D G+ H Y+ +GL
Sbjct: 157 RRGWAYEALNFYREMKV----EGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLK 212
Query: 306 CDVVIGTALVDMYGKCGCVERAYG----------------VFKEMPKKDTLAWTAMISVF 349
V + AL+DMY KCG +E A +F EMP KD + W AMI +
Sbjct: 213 LTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGY 272
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
GKEA F EM+A + P+ VT V LSAC+ G ++ G W H Y +E H
Sbjct: 273 VHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWI-----HHY-IEKH 326
Query: 410 -----VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
V +ID+ ++ G ++A ++ + +P + W A++ G +HGN
Sbjct: 327 ELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGN 378
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 180/504 (35%), Positives = 313/504 (62%), Gaps = 19/504 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS-----LSYATNVFS 89
+ C + +LK IH ++++ + + +RLL C + + L YA +FS
Sbjct: 19 LQSCSSFSDLKIIHGFLLRTHLISDV---FVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
I+ +L+ +N++IR C S+ + K Y QML + I PD +TFPFL+K ++
Sbjct: 76 QIQNPNLFVFNLLIR---CFSTGAEPS---KAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
LVG + Q+V+FG +DV+V+NS++ ++ CGF+ +A +F +M RDVVSW +M
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
+ GY + G ++ A ++F M RN+F+W+ +I G+ + +A++LF+ M+ E V
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK----REGV 245
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
++ + SV+S+CA+LGA++ G+ + Y+ +S + ++++GTALVDM+ +CG +E+A
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF+ +P+ D+L+W+++I A++G+ +A F +M + G P VTF +LSAC+H GL
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
VEKG + M+ + +EP + HY C++D+L RAG +EAE I M ++P+ + GALL
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G C+++ N E+ E+V LI + P + +YV L ++YA AG++D ++ R++MKE+ ++K
Sbjct: 426 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPK 533
PG S +E+DG +++F+M K
Sbjct: 486 P-PGWSLIEIDGKINKFTMGDDQK 508
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 192/490 (39%), Positives = 293/490 (59%), Gaps = 20/490 (4%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
E N+ E K I+ Q+ + + +N S+I +LF + G + A +F + D+
Sbjct: 156 EIGNVEEAKHIYHQMPERSIIASN---SMI--VLF----GMRGLVVEACKLFDEMLEKDM 206
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
T++ +I AC + N+ + + ++ + M G+ D + L C L +G
Sbjct: 207 VTWSALI---AC--FQQNEMYE-EAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 260
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++ +K G + +QN++I ++ CG + AR LFDE D++SWN+MI GYL+
Sbjct: 261 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 320
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
+D A +F M ++++ SW+S+I+G+ Q E L LFQEMQ S KPD+ T+
Sbjct: 321 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGF----KPDETTL 376
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
SV+SACA L A++ GKWVH Y++R+GL +V++GT L+DMY KCGCVE A VF M +
Sbjct: 377 VSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIE 436
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
K W A+I A+NG + + D F M+ V PN +TF+G+L AC H GLV++G+
Sbjct: 437 KGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHH 496
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F M H + ++P+V HY CM+D+L RAG EAE L+ MPM PDV WGALLG C+ HG
Sbjct: 497 FYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHG 556
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
+ E+G +V + LI+L P + F+V L ++YA G++DDV + R +M + + K +PGCS
Sbjct: 557 DSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLK-IPGCSM 615
Query: 517 VEVDGVVHEF 526
+E +GV+HEF
Sbjct: 616 IEANGVIHEF 625
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 213/451 (47%), Gaps = 66/451 (14%)
Query: 67 TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYK 126
+RL+ F + Y +F+ I+ ++ + +N+MIRA +TN H LYK
Sbjct: 14 SRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYI----QTNSPHFA--FTLYK 67
Query: 127 QMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
ML + D T+P L++ C+ R V+ V+K G DV+V+N++I+ F C
Sbjct: 68 SMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCS 127
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
+T A +F+E S D VSWN+++ GY+ G+++ A ++ +M +R+I + NS+I F
Sbjct: 128 NMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGM 187
Query: 247 GGRAREALELFQEM----------------QSSSVEEMVKP-----------DKITIASV 279
G EA +LF EM Q+ EE ++ D++ S
Sbjct: 188 RGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSA 247
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG----------------- 322
LSACA L ++ GK +H + G + + + AL+ MY KCG
Sbjct: 248 LSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDL 307
Query: 323 --------------CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
V+ A +F MP+KD ++W++MIS +A N E F+EM+
Sbjct: 308 ISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMS 367
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
G +P+ T V ++SACA +E+G+W ++ L +V +ID+ + G
Sbjct: 368 GFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLT-INVILGTTLIDMYMKCGCVET 426
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
A + M +E + W AL+ G M+G VE
Sbjct: 427 ALEVFYGM-IEKGISTWNALILGLAMNGLVE 456
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 199/503 (39%), Positives = 302/503 (60%), Gaps = 19/503 (3%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLIT-RLLFFCALSVSGSLSYAT 85
T L+L A E ++L +I Q+I +P L H +LI +L+ CA + +L +A
Sbjct: 12 TTLLLNYA--EHFQTKQLLQIQAQLITNPPLSL--HPNLIAVKLIGACA--ANANLYHAQ 65
Query: 86 NVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQM-LCTGISPDCLTFPFL 143
+F+ + +++++N +I+A+ C + E H+ C +Q+ L + +P+ + L
Sbjct: 66 LIFAQLPNPNVFSWNAIIKAHINCGAWE----HALNCFN--RQLSLPSAPNPNEYIYTSL 119
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
+K C G V+ V+K G+ +++ + S++ ++ SA +FDEM RDV
Sbjct: 120 IKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDV 179
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
VSWN M+ GY GDL+ A +F +M +R++ SWN++I G+VQ G+ +A+E+F EMQ
Sbjct: 180 VSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKV 239
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
V PD +T+ SVLSACA++GA+D G+W+ ++ G ++ +G AL+DMY KCG
Sbjct: 240 G---GVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGT 296
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
+E A +F M ++D ++W+ MI +G EAF + +M GV+PN VTF+GLLSA
Sbjct: 297 MEEARRIFDGMRERDVISWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSA 356
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+H+GLV+KG F M Y + P V HY C+ID+LSRAG EAE LI SMP+EP+V
Sbjct: 357 CSHAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVI 416
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
VWGALLGGC++H + GE+VAQ+L++LD YV + A GR DD M+
Sbjct: 417 VWGALLGGCRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQ 476
Query: 504 ERGIRKEVPGCSSVEVDGVVHEF 526
+GI K+ PGCS +EV VHEF
Sbjct: 477 HKGIIKD-PGCSKIEVHNTVHEF 498
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 309/544 (56%), Gaps = 25/544 (4%)
Query: 21 PPNKESTKLILRNA--------IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFF 72
P N + RN ID ++ E+ +IH I++ L + L L
Sbjct: 12 PQNHATATASFRNPPPEKLAVFIDNSHSVDEVLQIHAAILRHNLLIHPRYPVL--NLKLH 69
Query: 73 CALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG 132
A + G + ++ +F DL+ + I N + D + LY Q+L +
Sbjct: 70 RAYASHGKIRHSLALFHQTIDPDLFLFTAAI--NTASINGLKD----QAFLLYVQLLSSQ 123
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
I+P+ TF +LK C+ + G ++ V+KFG+ D +V ++ ++ G V SA+
Sbjct: 124 INPNEFTFSSILKSCSTK----SGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQ 179
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+FD M R +VS AMI Y + G+++ A LF RM +R+I SWN +I G+ Q G +
Sbjct: 180 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSD 239
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
AL LFQ++ + KPD+IT+ + LSAC+ +GA++ G+W+H ++ S + +V + T
Sbjct: 240 ALMLFQKLLADGKP---KPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCT 296
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA-EGVR 371
AL+DMY KCG +E A VF + P+KD +AW AMI+ +A++GY ++A F EM+ G++
Sbjct: 297 ALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQ 356
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P +TF+G L ACAH+GLV +G F M Y ++P + HY C++ +L RAG A
Sbjct: 357 PTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYE 416
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
+I++M ME D +W ++LG C++HG LG+++A+YLI + N YV L ++YA G
Sbjct: 417 IIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGD 476
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
++ V K RNLMKE+GI KE PG S++E+D VHEF + +E+ +L +S+ +K
Sbjct: 477 YEGVAKVRNLMKEKGIVKE-PGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIK 535
Query: 552 NGGF 555
+ G+
Sbjct: 536 SHGY 539
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 195/587 (33%), Positives = 322/587 (54%), Gaps = 53/587 (9%)
Query: 6 QMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSL 65
Q +SL ++SP T+ + +D + + LK++H++I+ L N SL
Sbjct: 16 QTKPFSLTTQKPQLSPKFTALTEDLCNKILDVNPDAKTLKKLHSKILIDQNLHPNP--SL 73
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
+L+ A + G Y ++F I ++ +N+MIR S N+ L ++
Sbjct: 74 GIKLMR--AYAACGEPCYTRHIFDEITDKNVVFFNVMIR------SYVNNGLYQDALLVF 125
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
K M G PD T+P +LK C+ + VG ++G VVK G+ ++++ N ++S++ C
Sbjct: 126 KTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKC 185
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL---------------------- 223
++ +AR + DEM RD+VSWN+M+ GY ++G + AL
Sbjct: 186 KWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLL 245
Query: 224 ---------------DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
D+F ++K++++ SWN +I +V EA++L+ +MQ VE
Sbjct: 246 PAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVE-- 303
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
PD ++I+SVL AC L A G+ +H Y+ R L ++++ AL+DMY KCGC++ A
Sbjct: 304 --PDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEAR 361
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF +M +D ++WT+MIS + ++G GK+A F++M G P+ + FV +L+AC+H+G
Sbjct: 362 AVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAG 421
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
LV++GR+CF +M Y + P + HY CM+D+L RAG EA L R MPMEP+ VWG+L
Sbjct: 422 LVDEGRYCFNLMAE-YGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSL 480
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
L C+++ ++ + A +L L P +YV L ++YAKAGR+ DV+ R++M +GI+
Sbjct: 481 LSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIK 540
Query: 509 KEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K +PG S+VE++ V+ F +E+ L L MK G+
Sbjct: 541 K-IPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGY 586
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 303/554 (54%), Gaps = 52/554 (9%)
Query: 9 SYSLLNSPAKVSPPN---KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSL 65
S+++ S SP + K+ L+L A + K ++IH I+ TN
Sbjct: 22 SFTISTSTCPESPKSYILKKCIALLLSCASSKFK----FRQIHAFSIRHGVPLTNPD--- 74
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
+ + L F LS +SYA +FS I+ +++T+N MIR A + L+LY
Sbjct: 75 MGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA------ESENPMPALELY 128
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
+QM + I PD T+PFLLK K +D G V+ ++ G VFVQN+++ ++ AC
Sbjct: 129 RQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAAC 188
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
G SA LF M +RN+ +WNS+I G+
Sbjct: 189 GHAESAH-------------------------------KLFELMAERNLVTWNSVINGYA 217
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
GR EAL LF+EM VE PD T+ S+LSACA LGA+ G+ H Y+ + GLD
Sbjct: 218 LNGRPNEALTLFREMGLRGVE----PDGFTMVSLLSACAELGALALGRRAHVYMVKVGLD 273
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
++ G AL+D+Y KCG + +A+ VF EM +K ++WT++I A+NG+GKEA + F+E+
Sbjct: 274 GNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKEL 333
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
E +G+ P+ +TFVG+L AC+H G+V++G F M+ Y + P + HY CM+D+L RAGL
Sbjct: 334 ERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGL 393
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDM 485
+A I++MPM+P+ VW LLG C +HG++ LGE L+ L+P + YV L ++
Sbjct: 394 VKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNL 453
Query: 486 YAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNG 545
YA R+ DV K R M G++K PG S VE+ +HEF M EE+ + L
Sbjct: 454 YASEQRWSDVHKVRRTMLREGVKK-TPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAE 512
Query: 546 LSKIMKNGGFGQYI 559
++K++K G+ +I
Sbjct: 513 ITKLLKLEGYVPHI 526
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 219/595 (36%), Positives = 312/595 (52%), Gaps = 94/595 (15%)
Query: 28 KLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNV 87
KL L N+I CK +R LK+IH +I S L +D L FF + +
Sbjct: 5 KLRLLNSIHRCKTIRSLKQIHAHLIASGLL--HDEFVLSKVSEFF-----GKHIGFVDYA 57
Query: 88 FSHIKRSDLYT----YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
F + ++DL+ YN +I A A + +Y +++ G PD TFP +
Sbjct: 58 FDFLNQTDLHVGTLPYNTLIAAYASSCTPK------AAFLVYGRIVGNGFVPDMYTFPVV 111
Query: 144 LKECTKRLDGLVGASVYGQVVKFG--------------------------VCDDVFVQNS 177
LK CTK L G V+G VK G V D++ V++
Sbjct: 112 LKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDV 171
Query: 178 VISLFMACGFVTSARMLFDEMSN----RDVVSWNAMII---------GYLRSG------- 217
V + G+V + LFDE N DVV A + GYL G
Sbjct: 172 VSWTGLISGYVRTG--LFDEAINLFLKMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLV 229
Query: 218 ----------------DLDV-------ALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
D+ V A LF + R+I SW SII+G VQ + +++L
Sbjct: 230 YKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSL 289
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
ELF +MQ S VE PD+I + SVLSACA LGA+D+G+WV Y+ R G++ D+ IGTAL
Sbjct: 290 ELFYDMQISGVE----PDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTAL 345
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
VDMY KCGC+E A +F +P ++ W A++ A++G+G EA F M G+RPN
Sbjct: 346 VDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNE 405
Query: 375 VTFVGLLSACAHSGLVEKGR-WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
VTF+ +L+AC HSGLV +GR + + M+ + P + HY CMID+L RAGL EA + I
Sbjct: 406 VTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFI 465
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
R+MP+ PDV +WGALL C+ +GNVEL +++ +L++L + YV L ++YA R+D
Sbjct: 466 RNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWD 525
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
DV + R LMK++GIRK PG S +EVDG HEF + + E++ ++LN L+
Sbjct: 526 DVTRVRRLMKDKGIRK-FPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNILAN 579
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 186/472 (39%), Positives = 291/472 (61%), Gaps = 23/472 (4%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFP 141
A +F + D ++N+MI C+ E + +++M G PD T
Sbjct: 251 AKKLFDEMTTRDSVSWNVMISGYVRCRRFE-------DAINTFREMQQEGNEKPDEATVV 303
Query: 142 FLLKECTKRLDGLVGASVYGQVVK-FGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
L CT + +G ++ V K G + N+++ ++ CG + AR +FDEMS
Sbjct: 304 STLSACTALKNLELGDEIHNYVRKELGFT--TRIDNALLDMYAKCGCLNIARNIFDEMSM 361
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
++V+ W +MI GY+ GDL A DLF + R++ W ++I G+VQ +A+ LF+EM
Sbjct: 362 KNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREM 421
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
Q + +KPDK T+ ++L+ CA LGA++ GKW+HGYL + + DVV+GTAL++MY K
Sbjct: 422 QI----QKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSK 477
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CGCV+++ +F E+ KDT +WT++I A+NG EA F EME G +P+ +TF+G+
Sbjct: 478 CGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGV 537
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
LSAC+H GLVE+GR F M+ V+ +EP V HY C+ID+L RAGL EAE LI+ +P+E
Sbjct: 538 LSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIEN 597
Query: 441 ---DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
V ++GALL C++H NV++GE++A+ L +++ + + + L ++YA R++D KK
Sbjct: 598 CEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKK 657
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
R MKE G++K +PGCS +EVDG+VHEF + G P E++ I + L+++
Sbjct: 658 VRRKMKELGVKK-MPGCSLIEVDGIVHEF-LVGDPS--HPEMIEICSMLNRV 705
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/478 (30%), Positives = 229/478 (47%), Gaps = 89/478 (18%)
Query: 14 NSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFC 73
+S A NK+S LRN CK+M +LK+I +QI + + I +L+ FC
Sbjct: 87 SSSASNLQTNKKSCIECLRN----CKSMDQLKQIQSQIFR---IGLEGDRDTINKLMAFC 139
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGI 133
A S G+L YA +F++++ L+ YN+M++ A + K L L++Q+ G+
Sbjct: 140 ADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILR------KVLLLFQQLREDGL 193
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
PD T+PF+LK D G V G +VK G+ D +V NS+I ++ V +A+
Sbjct: 194 WPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKK 253
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LFDEM+ RD VSWN MI GY+R RR + +A
Sbjct: 254 LFDEMTTRDSVSWNVMISGYVRC----------RRFE---------------------DA 282
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
+ F+EMQ E KPD+ T+ S LSAC L ++ G +H Y+R+ L I A
Sbjct: 283 INTFREMQQEGNE---KPDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDNA 338
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF------------------------ 349
L+DMY KCGC+ A +F EM K+ + WT+MIS +
Sbjct: 339 LLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLW 398
Query: 350 --ALNGYGK-----EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
+NGY + +A FREM+ + ++P+ T V LL+ CA G +E+G+W H
Sbjct: 399 TAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWI-----H 453
Query: 403 VYLVEPHVYHY----ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
YL E + +I++ S+ G ++ + + + D W +++ G M+G
Sbjct: 454 GYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELE-DKDTASWTSIICGLAMNG 510
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 197/540 (36%), Positives = 293/540 (54%), Gaps = 71/540 (13%)
Query: 18 KVSPPNKESTKL--ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL 75
+ SPP+ S K + +D C M ELK+ H+QII+ ND + R++ FCA+
Sbjct: 8 QASPPSLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADND---AMGRVIKFCAI 64
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S SG L + + C+ +Y +ML +SP
Sbjct: 65 SKSGYLRWQL--------------------------------ARNCIFMYSRMLHKSVSP 92
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
+ T+P L++ C G ++ V+KFG D F N++I +++ + AR +F
Sbjct: 93 NKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVF 152
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D M RD RN SWN++I +VQ R EA
Sbjct: 153 DNMPQRD-----------------------------RNSVSWNAMIAAYVQSNRLHEAFA 183
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
LF M+ E V DK AS+LSAC LGA++ GKW+HGY+ +SG++ D + T ++
Sbjct: 184 LFDRMRL----ENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVI 239
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DMY KCGC+E+A VF E+P+K +W MI A++G G+ A + F+EME E V P+ +
Sbjct: 240 DMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGI 299
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
TFV +LSACAHSGLVE+G+ F M V ++P + H+ CM+D+L RAGL EA +LI
Sbjct: 300 TFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINE 359
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP+ PD V GAL+G C++HGN ELGE++ + +I+L+P N YV L ++YA AGR++DV
Sbjct: 360 MPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDV 419
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K R LM +RG++K PG S +E + V EF G +E+ L+ + + +++ G+
Sbjct: 420 AKVRKLMNDRGVKK-APGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGY 478
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 181/511 (35%), Positives = 300/511 (58%), Gaps = 17/511 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ K+ E K+I+ II Q++ ++T+++ FC + YAT +F+ +
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSS---FMVTKMVDFC--DKIEDMDYATRLFNQVSNP 71
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDG 153
+++ YN +IRA T+++ +++YKQ+L PD TFPF+ K C
Sbjct: 72 NVFLYNSIIRA------YTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSC 125
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
+G V+G + KFG V +N++I ++M + A +FDEM RDV+SWN+++ GY
Sbjct: 126 YLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGY 185
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
R G + A LF M + I SW ++I+G+ G EA++ F+EMQ + +E PD+
Sbjct: 186 ARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE----PDE 241
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
I++ SVL +CA LG+++ GKW+H Y R G + AL++MY KCG + +A +F +
Sbjct: 242 ISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ 301
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M KD ++W+ MIS +A +G A +TF EM+ V+PN +TF+GLLSAC+H G+ ++G
Sbjct: 302 MEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG 361
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
F MMR Y +EP + HY C+ID+L+RAG A + ++MPM+PD +WG+LL C+
Sbjct: 362 LRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCR 421
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
GN+++ +L++L+P + YV L ++YA G+++DV + R +++ ++K PG
Sbjct: 422 TPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK-TPG 480
Query: 514 CSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
S +EV+ +V EF + K E+ ++L
Sbjct: 481 GSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 315/589 (53%), Gaps = 47/589 (7%)
Query: 2 SKKLQMVSYSLLN--SPAKVS----PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSP 55
+ L+ ++ S+ N SP +S PP++ S K L N I C + EL + +IK+
Sbjct: 7 TNALKQLTRSIGNFVSPPSISMPLQPPSRPSFKQTLLNRIKNCSTINELHGLCASMIKTN 66
Query: 56 CLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETN 114
+Q F A S+ Y F+ ++ +++ YN MI+ C
Sbjct: 67 AIQ-----DCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCG----- 116
Query: 115 DTHSGKCLKLYKQMLC-TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF 173
+ + L+ Y ML + + P TF L+K CT +G V+ + K G +F
Sbjct: 117 --YPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLF 174
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRN 233
VQ +++ + ++ AR +FDEM RD +W AM+ R GD+D A LF M +RN
Sbjct: 175 VQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFEEMPERN 234
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSV-----------------------EEM-- 268
+WN++I G+ + G A LF +M + + EM
Sbjct: 235 TATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRL 294
Query: 269 --VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+ PD++T+++V SACA++GA++ GK +H Y+ GL+ DV IG+ALVDMY KCG ++
Sbjct: 295 NGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDL 354
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
+ +F ++ K+ W A+I A++GY ++A F ME E + PN VTF+ +LSAC H
Sbjct: 355 SLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTH 414
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+GLV++GR F+ M Y + P + HY CM+D+LS++G +EA LI+SM EP+ +WG
Sbjct: 415 AGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWG 474
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALL GC++HGN E+ E + L+ L+P+N Y L MYA+ + +V R++MKE+G
Sbjct: 475 ALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKG 534
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ K+ PG S +E++G +H+FS +++ IL L +K G+
Sbjct: 535 VEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFILTELDGQLKLAGY 583
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 194/533 (36%), Positives = 299/533 (56%), Gaps = 47/533 (8%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+C N R LK++H +I + N S++ L+F A+ VSG++ YA +F+ I + D+
Sbjct: 22 KCTNFRSLKQLHAFLIVNGL---NSTTSVLRELIFVSAIVVSGTMDYAHQLFAQISQPDI 78
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+ +N MIR +A + LY QM G+ PD TF F+LK CTK +G
Sbjct: 79 FMWNTMIRGSA------QTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLG 132
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++G+V+K G + FV+N++I CG + +AR LFD + R+VV W+A+ GY R
Sbjct: 133 FGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARR 192
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV---EEMV---- 269
G LDVA LF M +++ SWN +IT + + G +A +LF E+ V M+
Sbjct: 193 GKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYV 252
Query: 270 --------------------KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD---- 305
+PD +T+ S+LSA A LG ++ GK +H RS D
Sbjct: 253 LSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIH----RSIFDMCCG 308
Query: 306 -CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
V++ AL+DMY KCG + A VF+ M KKDT +W ++I AL+G+ +E+ + F+E
Sbjct: 309 DLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQE 368
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
M ++PN +TFV +L AC+H+G V +GR F +M++V+ +EP++ HY CM+DIL RAG
Sbjct: 369 MLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAG 428
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
L EA I +M +EP+ +W LLG C++HG+VELG + + L+ + YV L +
Sbjct: 429 LLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSN 488
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG-VVHEFSMKGSPKVVK 536
+YA G +D V+K R LM + G++K+V G S ++ D + F P V+
Sbjct: 489 IYASQGEWDGVQKVRKLMDDGGVKKKV-GHSLIDSDNSFLMHFLFDSKPNFVE 540
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 184/455 (40%), Positives = 282/455 (61%), Gaps = 21/455 (4%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFP 141
A +F + D ++N+MI C+ E + +++M G PD T
Sbjct: 297 AKKLFDEMTTRDSVSWNVMISGYVRCRRFE-------DAINTFREMQQEGNEKPDEATVV 349
Query: 142 FLLKECTKRLDGLVGASVYGQVVK-FGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
L CT + +G ++ V K G + N+++ ++ CG + AR +FDEMS
Sbjct: 350 STLSACTALKNLELGDEIHNYVRKELGFT--TRIDNALLDMYAKCGCLNIARNIFDEMSM 407
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
++V+ W +MI GY+ GDL A DLF + R++ W ++I G+VQ +A+ LF+EM
Sbjct: 408 KNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREM 467
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
Q + VKPDK T+ ++L+ CA LGA++ GKW+HGYL + + DVV+GTAL++MY K
Sbjct: 468 QI----QRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSK 523
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CGCV+++ +F E+ KDT +WT++I A+NG EA F EME G +P+ +TF+G+
Sbjct: 524 CGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGV 583
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
LSAC+H GLVE+GR F M+ V+ +EP V HY C+ID+L RAGL EAE LI+ +P+E
Sbjct: 584 LSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIEN 643
Query: 441 ---DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
V ++GALL C++H NV++GE++A+ L +++ + + + L ++YA R++D KK
Sbjct: 644 CEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKK 703
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSP 532
R MKE G++K +PGCS +EVDG+VHEF + G P
Sbjct: 704 VRRKMKELGVKK-MPGCSLIEVDGIVHEF-LVGDP 736
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 237/495 (47%), Gaps = 95/495 (19%)
Query: 3 KKLQMVSYSLLNSP------AKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPC 56
+++Q +S +SP ++S K+S LRN CK+M +LK+I +QI +
Sbjct: 116 RRVQFISRHFSSSPHLVPVLLRISKLTKKSCIECLRN----CKSMDQLKQIQSQIFR--- 168
Query: 57 LQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDT 116
+ I +L+ FCA S G+L YA +F++++ L+ YN+M++ A +
Sbjct: 169 IGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILR--- 225
Query: 117 HSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQN 176
K L L++Q+ G+ PD T+PF+LK D G V G +VK G+ D +V N
Sbjct: 226 ---KVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYN 282
Query: 177 SVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFS 236
S+I ++ V +A+ LFDEM+ RD VSWN MI GY+R RR +
Sbjct: 283 SLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRC----------RRFE------ 326
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
+A+ F+EMQ E KPD+ T+ S LSAC L ++ G +H
Sbjct: 327 ---------------DAINTFREMQQEGNE---KPDEATVVSTLSACTALKNLELGDEIH 368
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF------- 349
Y+R+ L I AL+DMY KCGC+ A +F EM K+ + WT+MIS +
Sbjct: 369 NYVRKE-LGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLR 427
Query: 350 -------------------ALNGYGK-----EAFDTFREMEAEGVRPNHVTFVGLLSACA 385
+NGY + +A FREM+ + V+P+ T V LL+ CA
Sbjct: 428 EARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCA 487
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHY----ACMIDILSRAGLFSEAERLIRSMPMEPD 441
G +E+G+W H YL E + +I++ S+ G ++ + + + D
Sbjct: 488 QLGALEQGKWI-----HGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELE-DKD 541
Query: 442 VFVWGALLGGCQMHG 456
W +++ G M+G
Sbjct: 542 TASWTSIICGLAMNG 556
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/586 (35%), Positives = 306/586 (52%), Gaps = 80/586 (13%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +C N+ + +IH Q++K+ N H L A S+ L+ A NVF+H+
Sbjct: 28 LHKCTNLDSVNQIHAQVLKA-----NLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHP 82
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+++ YN +IRA+A N +H + QM G+ PD T+PFLLK C+
Sbjct: 83 NVHLYNSIIRAHA-----HNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLP 137
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVI---------------SLFMA--------------- 184
+ ++ V K G D+FV NS+I SLF+A
Sbjct: 138 LVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGG 197
Query: 185 ---CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWN--- 238
CG + A LFDEM +RD+VSWN M+ GY ++G++D A +LF RM RNI SW+
Sbjct: 198 LVRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMV 257
Query: 239 ----------------------------SIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
+II G+ + G AREA EL+ +M+ E ++
Sbjct: 258 CGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKME----EAGMR 313
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD + S+L+ACA G + GK +H +RR C + A +DMY KCGC++ A+ V
Sbjct: 314 PDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDV 373
Query: 331 FKE-MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
F M KKD ++W +MI FA++G+G++A + F M EG P+ TFVGLL AC H+GL
Sbjct: 374 FSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGL 433
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V +GR F M VY + P V HY CM+D+L R G EA L+RSMPMEP+ + G LL
Sbjct: 434 VNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLL 493
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C+MH +V+L V + L L+P + Y L ++YA+AG + +V R MK G K
Sbjct: 494 NACRMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEK 553
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G SS+EV+ VHEF++ +++ +++ L + ++ G+
Sbjct: 554 P-SGASSIEVEEEVHEFTVFDQSHPKSDDIYQMIDRLVQDLRQVGY 598
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 192/502 (38%), Positives = 292/502 (58%), Gaps = 20/502 (3%)
Query: 34 AIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR 93
A+++C N+ LK++ +I QT +L+ FC L+++ L YA +F ++
Sbjct: 49 ALEKCSNLNHLKQLQGFLISHGHSQT---QFFAFKLVRFCNLTLA-DLCYARYIFDNLTS 104
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRLD 152
+++ Y MI A A LY+ M+ G I P+ +P +L+ C L
Sbjct: 105 PNVFLYTAMITAYASYPDPK------AAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLG 158
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMA-CGFVTSARMLFDEMSNRDVVSWNAMII 211
V+ QV+K G VQ +++ + + SAR +FDEM R VVSW AMI
Sbjct: 159 SNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMIS 218
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM-----QSSSVE 266
GY R G+ D A++LF M +R++ +WN++I G Q G EA+ LF+ M + ++ +
Sbjct: 219 GYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNND 278
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
KP+K T+ S LSAC + G + GKW+HGY+ ++ D I AL+DMYGKCG ++
Sbjct: 279 RENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKV 338
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME--AEGVRPNHVTFVGLLSAC 384
A VF + K+ +W ++I+ AL+G+ A D F E+ +GV+PN VTFVG+L+AC
Sbjct: 339 ARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNAC 398
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
H GLVEKG F MMR Y +EP + H+ C+ID+L RAG F EA ++R M +EPD V
Sbjct: 399 THGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVV 458
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
WG+LL C++HG +L E + LI++DP N + + L ++YA+ G++D+V+K R L+KE
Sbjct: 459 WGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKE 518
Query: 505 RGIRKEVPGCSSVEVDGVVHEF 526
+ K PGCS +EVD V++F
Sbjct: 519 KNAYK-TPGCSWIEVDNQVYQF 539
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 207/585 (35%), Positives = 322/585 (55%), Gaps = 84/585 (14%)
Query: 5 LQMVSYSLLNSPAKVSPPN---KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTND 61
+ S L+ P +S + K+S +L+N CK+M+ LK+I TQI+++ Q+ D
Sbjct: 10 FKFTSLHFLSKPLHLSTSSHFTKKSCIFLLKN----CKSMQHLKQIQTQILRTGFHQSGD 65
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
+ + + C G+L YA +F++I L+ YN++I+A T + K
Sbjct: 66 ---TLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKAF------TKNGSFRKA 116
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
+ L++Q+ G+SPD T+PF+ K + G VYG VVK G+ D +V NS++ +
Sbjct: 117 VLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDM 176
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWN---------------------------------- 207
+ G V + R +F+EM RDVVSWN
Sbjct: 177 YAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICW 236
Query: 208 -AMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
+M+ GY+ G LD A +LF R R++ W ++I G+VQ R +A+ LF+EMQ
Sbjct: 237 TSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQI---- 292
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+ V PD+ T+ ++L+ D V+GTAL++MY KCG +E+
Sbjct: 293 KRVSPDRFTLVALLT-------------------------DAVVGTALIEMYAKCGFIEK 327
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
+ +F + +KDT +WT++I A+NG +A + F EM GV+P+ +TF+G+LSAC+H
Sbjct: 328 SLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSH 387
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP---MEPDVF 443
GLVE+GR F M VY +EP + HY C+ID+L RAG EAE LI P E V
Sbjct: 388 GGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVP 447
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
++GALL C+ HGNVE+GE+VA+ L+ ++ + + + L ++YA A R++DV K R MK
Sbjct: 448 LYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMK 507
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
+ G++K VPGCSSVEV+G+VHEF + + E+ +L+ ++K
Sbjct: 508 DLGVKK-VPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAK 551
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 257 FQEMQSSSVEEMVKPDKITIASVLS--ACAYL----GAIDHGKWVHGYLRRSGLDCDVVI 310
FQ + +S+ + KP ++ +S + +C +L ++ H K + + R+G
Sbjct: 7 FQLFKFTSLHFLSKPLHLSTSSHFTKKSCIFLLKNCKSMQHLKQIQTQILRTGFHQS--- 63
Query: 311 GTALVDMYGKC-----GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
G L C G + A +F + + +I F NG ++A FR++
Sbjct: 64 GDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQL 123
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGR--WCFVMMRHVYLVEPHVYHYACMIDILSRA 423
EG+ P++ T+ + A G V +G + FV+ +E Y ++D+ +
Sbjct: 124 REEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSG---LEFDTYVCNSLMDMYAEV 180
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF-YVNL 482
G ++ MP + DV W L+ G E V + + + P+ + ++
Sbjct: 181 GRVQNLRQVFEEMP-QRDVVSWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSM 239
Query: 483 CDMYAKAGRFDDVKK 497
Y G+ D+ ++
Sbjct: 240 VSGYVNCGQLDEARE 254
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 306/586 (52%), Gaps = 80/586 (13%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +C N+ + +IH Q++K+ N H L A S+ L+ A NVF+H+
Sbjct: 28 LHKCSNLDSVNQIHAQVLKA-----NLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHP 82
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+++ YN +IRA+A N +H + QM G+ PD T+PFLLK CT
Sbjct: 83 NVHLYNSIIRAHA-----HNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLP 137
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVI---------------SLFMA--------------- 184
+ ++ V KFG D+FV NS+I SLF+A
Sbjct: 138 LVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGG 197
Query: 185 ---CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
CG + A LFDEM RD+VSWN M+ GY ++G++D A +LF RM +RNI SW++++
Sbjct: 198 LVRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMV 257
Query: 242 TGFVQGGR-------------------------------AREALELFQEMQSSSVEEMVK 270
G+ +GG REA EL+ +M+ E ++
Sbjct: 258 CGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKME----EAGLR 313
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD + S+L+ACA G + GK +H +RR C + A +DMY KCGC++ A+ V
Sbjct: 314 PDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDV 373
Query: 331 FKE-MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
F M KKD ++W +MI FA++G+G++A + F M EG P+ TFVGLL AC H+GL
Sbjct: 374 FSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGL 433
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V +GR F M VY + P V HY CM+D+L R G EA L+RSMPMEP+ + G LL
Sbjct: 434 VNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLL 493
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C+MH +V+ V + L ++P + Y L ++YA+AG + +V R M G +K
Sbjct: 494 NACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQK 553
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G SS+EV+ VHEF++ +++ +++ L + ++ G+
Sbjct: 554 P-SGASSIEVEEEVHEFTVFDQSHPKSDDIYKMIDRLVQDLRQVGY 598
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 317/600 (52%), Gaps = 89/600 (14%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITR-LLFFCALSVSG 79
P N +S LIL+ +CK ++L+++H ++K+ L +IT +L AL +
Sbjct: 20 PENPKS--LILQ----QCKTPKDLQQVHAHLLKTRRLLD----PIITEAVLESAALLLPD 69
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
++ YA ++F+HI + + YN+MIR A K S N L L+K+M + D T
Sbjct: 70 TIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDN------ALLLFKKMHEKSVQHDKFT 123
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
F +LK C++ G V+ ++K G + FV+N++I ++ CG + AR +FD M
Sbjct: 124 FSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMP 183
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRM------------------------------ 229
R +V+WN+M+ GY ++G D + LFR++
Sbjct: 184 ERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGEL 243
Query: 230 ---------KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV--------------- 265
+RN S+I + + G+ A +LF EM V
Sbjct: 244 IGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADR 303
Query: 266 --------EEMVK----PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
EM K P+++T+ SVL +CA LGA + GKWVH Y+++ + V +GT
Sbjct: 304 CKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQ 363
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
L+D Y KCG ++R+ VFKEM K+ WTA+I A NG GK A + F M V+PN
Sbjct: 364 LIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPN 423
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
VTF+G+LSAC+H+ LV++GR F MR + +EP + HY CM+DIL RAG EA + I
Sbjct: 424 DVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFI 483
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
+MP P+ VW LL C+ H N+E+ EK +++ L+P + Y+ L + YA GR +
Sbjct: 484 DNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVE 543
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHE-FSMKGSPKVVKEELVLILNGLSKIMKN 552
D + R+L+KE+ I+K +PGCS +E+DGVVHE FS G K KE I + L K+MK
Sbjct: 544 DAIRVRSLIKEKEIKK-IPGCSLIELDGVVHEFFSEDGEHKHSKE----IHDALDKMMKQ 598
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 191/539 (35%), Positives = 298/539 (55%), Gaps = 20/539 (3%)
Query: 14 NSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFC 73
+S ++P N S I+ I +CK + +L ++H I + L + SL+T+ L+
Sbjct: 5 SSSNHITPQNYHS---IIIKLIKQCKTISQLHQLHAYTITNTPLSFHSSPSLLTKFLYTL 61
Query: 74 AL-----SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM 128
S + L YA ++F+ I+ + YN +IR + S H + QM
Sbjct: 62 TTKAKSKSSTSLLHYAKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALH------FFTQM 115
Query: 129 LCTGISPDCLTFPFLLKECTKRLDGLVGAS-VYGQVVKFGVCDDVFVQNSVISLFMACGF 187
+ D +FPF LK C + L G+ A ++ QV+KFG D++V NS+I +M
Sbjct: 116 RRLSVPLDSHSFPFTLKACAQ-LGGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVSDM 174
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
A +FDE RDVVS+N +I G++++GD+ A +LF M R+ SWN+II G +G
Sbjct: 175 SNDAYKVFDESPQRDVVSYNVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKG 234
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
EA+ELF M ++ ++PD + + S LSACA LG ++ GK +H Y+ R+ + D
Sbjct: 235 DYCEEAIELFDFM----MDLEIRPDNVALVSTLSACAQLGELEKGKKIHDYIERNAMKVD 290
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+ T LVD Y KCGCV+ A +F K+ W AM+ A++GYG+ + F M
Sbjct: 291 TFLSTGLVDFYAKCGCVDIALKIFDSSSDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIE 350
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
GV+P+ ++ +G+L C+HSGLV++ R F M VY V HY CM D+L RAGL
Sbjct: 351 AGVKPDGISILGVLVGCSHSGLVDEARKLFDEMESVYGVPREPKHYGCMADLLGRAGLIK 410
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
+ +I+ MP D+ VW LLGGC++HG+VE+ EK A++L++L P + Y L ++YA
Sbjct: 411 KVMEMIKDMPRGGDMSVWSGLLGGCRIHGDVEIAEKAAKHLMELKPDDGGVYSILANVYA 470
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
A R++DV R + + ++ G S +++DGV HEF S +++ L+LNG+
Sbjct: 471 NAERWEDVMNIRRSLSSNRVVTKIAGFSLIQLDGVAHEFIAGDSLHSESDKIYLVLNGI 529
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 187/480 (38%), Positives = 279/480 (58%), Gaps = 11/480 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SG + + +VF+ I +N MIRA A + + + Y M G + D
Sbjct: 118 SGDIDSSVSVFNGIGEPSSLLFNSMIRAYA------RYGFAERTVATYFSMHSWGFTGDY 171
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
TFPF+LK + L +G V+G +++ G+ D++V S+I L+ CG + A +FD
Sbjct: 172 FTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDN 231
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M+ RDV SWNA++ GY +SG +D AL +F RM RNI SW ++I+G+ Q G A++AL LF
Sbjct: 232 MTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLF 291
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
EM + V+P+ +TI SVL ACA L ++ G+ +H R GL+ + + AL M
Sbjct: 292 DEMVKE--DSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 349
Query: 318 YGKCGCVERAYGVFKEMPK--KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
Y KCG + A F ++ + K+ +AW MI+ +A G+G +A TFREM G++P+ +
Sbjct: 350 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 409
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
TF GLLS C+HSGLV+ G F M Y + P V HYAC+ D+L RAG +EA +L+
Sbjct: 410 TFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGE 469
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MPM +WG+LL C+ H N+E+ E A+ L L+P N YV L +MYA+AGR+ +V
Sbjct: 470 MPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEV 529
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K R ++K +G +K PGCS +E++G H F + +E+ + L L + MK G+
Sbjct: 530 DKLRAIVKSQGTKKS-PGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGY 588
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/505 (37%), Positives = 290/505 (57%), Gaps = 24/505 (4%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITR--LLFFCALSVSGSLS---------Y 83
I +CK++++L ++H I + L H SL+ L F AL + + S Y
Sbjct: 22 IRQCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNASPTTPAALTGY 81
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A +VF+ I + YN MIRA+ SS L ++ +M + PD TFPF
Sbjct: 82 ALSVFNRIPNPSTFGYNTMIRAHTLLSSPL------AALVIFVRMRRLSVPPDTHTFPFC 135
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
LK C+ + +++ Q KFG D+FV N++I ++ + A +F+E S +DV
Sbjct: 136 LKACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDV 195
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR-AREALELFQEMQS 262
VS+NA+I G+++ GD D A LF +M R+ SW +++ G+ Q G +A++LF M
Sbjct: 196 VSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLI 255
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
S+V +PD I + S LSACA LG ++ GK +H Y++++ + + + T LVD+Y KCG
Sbjct: 256 STV----RPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCG 311
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
C+E A +F+ P K+ W A++ ++G G + F M G++P+ V+F+G+L
Sbjct: 312 CIETAREIFESSPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILV 371
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
C H+GLV + R F M VY V + HY CM D+L RAGL EA +I MPM DV
Sbjct: 372 GCGHAGLVCEARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDV 431
Query: 443 FVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
FVWG +LGGC++HGNVE+ EK A+ ++ L+P + Y + D+YA AGR++DV + R LM
Sbjct: 432 FVWGGVLGGCRIHGNVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLM 491
Query: 503 KERGIRKEVPGCSSVEV-DGVVHEF 526
R ++K PGCS V++ +GV H F
Sbjct: 492 HSRQVKKN-PGCSLVQLNNGVFHGF 515
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 176/478 (36%), Positives = 278/478 (58%), Gaps = 10/478 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SG+ A VF+++ D+ ++N MI A A K L L+++M + P+
Sbjct: 221 SGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGL------PDKALLLFQEMEMKDVKPNV 274
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T +L C K++D G + + G + + + N+++ +++ CG + A+ LF++
Sbjct: 275 ITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNK 334
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
MS +D+VSW M+ G+ + G+ D A +F M + +WN++I+ + Q G+ R AL LF
Sbjct: 335 MSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLF 394
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
EMQ S + KPD++T+ L A A LGAID G W+H Y+++ ++ + + T+L+DM
Sbjct: 395 HEMQLS---KDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDM 451
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG + +A VF + +KD W+AMI A+ G GK A D F M ++PN VTF
Sbjct: 452 YAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTF 511
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+L AC H+GLV +G F M +Y + P + HY C++DI RAGL +A I MP
Sbjct: 512 TNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMP 571
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+ P VWGALLG C HGNVEL E Q L++L+P NH +V L ++YAKAG ++ V
Sbjct: 572 IPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSN 631
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R LM++ ++KE P CSS++V+G+VHEF + + +++ L+ +S+ K G+
Sbjct: 632 LRKLMRDSDVKKE-PWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGY 688
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 228/471 (48%), Gaps = 93/471 (19%)
Query: 25 ESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYA 84
EST ++ ID+C N +LK+IH ++++ + D ++ ++LL A+S L YA
Sbjct: 71 ESTNIL--EFIDQCTNTMQLKQIHAHMLRTS--RFCDPYT-ASKLLTAYAISSCSCLIYA 125
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML--CTGISPDCLTFPF 142
NVF+ I + +LY +N +IR A S T + ++ ML C+ P+ TFPF
Sbjct: 126 KNVFNQIPQPNLYCWNTLIRGYASSSDPT------QSFLIFLHMLHSCSEF-PNKFTFPF 178
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
L K ++ +G+ ++G V+K + D+F+ NS+I+ + + G A +F M +D
Sbjct: 179 LFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKD 238
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
VVSWNAMI + G D AL LF+ M+ ++
Sbjct: 239 VVSWNAMINAFALGGLPDKALLLFQEMEMKD----------------------------- 269
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
VKP+ IT+ SVLSACA ++ G+W+ Y+ +G +++ A++DMY KCG
Sbjct: 270 ------VKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCG 323
Query: 323 CV-------------------------------ERAYGVFKEMPKKDTLAWTAMISVFAL 351
C+ + A+ +F MP K T AW A+IS +
Sbjct: 324 CINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQ 383
Query: 352 NGYGKEAFDTFREME-AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
NG + A F EM+ ++ +P+ VT + L A A G ++ G W HVY ++ H
Sbjct: 384 NGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWI-----HVY-IKKHD 437
Query: 411 YHYAC-----MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ C ++D+ ++ G ++A + ++ + DV+VW A++G M+G
Sbjct: 438 INLNCHLATSLLDMYAKCGNLNKAMEVFHAVERK-DVYVWSAMIGALAMYG 487
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 184/537 (34%), Positives = 326/537 (60%), Gaps = 23/537 (4%)
Query: 26 STKLILRNA-----IDE-CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
++KLI+ N +D+ C MR+L++ H +IKS Q + + +R+L FCA S G
Sbjct: 16 TSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSG--QAIESFA-ASRILAFCA-SPLG 71
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCL 138
++ YA VF ++ +L+++N +IR + ++ L L+ ML + + P L
Sbjct: 72 NMDYAYLVFLQMQNPNLFSWNTVIRGF------SQSSNPQIALYLFIDMLVSSQVEPQRL 125
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T+P + K ++ GA ++G+++K G+ D F++N+++ ++ GF++ AR +F++
Sbjct: 126 TYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQE 185
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
DVVSWN+MI+G + G++D + LF +M +N SWNS+I G+V+ G +EAL+LF
Sbjct: 186 MEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFI 245
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+MQ EE ++P + T+ S+L+A A +GA+ G W+H Y++++ L + ++ TA++DMY
Sbjct: 246 KMQ----EERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMY 301
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + A VF+++P + +W +MI A+NG KEA F+ +E+ ++P+ ++F+
Sbjct: 302 CKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFM 361
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+L+AC H +V++G F M++ Y +EP + HY M+D++SRAG EAE+ I++MP+
Sbjct: 362 AVLTACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPI 421
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
E D +WG LL C+++GN E+ ++ A+ + +LDP YV + +++A F +
Sbjct: 422 EKDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVGAMEK 481
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVK-EELVLILNGLSKIMKNGG 554
R M+ + + KE PG S +EVD VHEF G K +E+ ++L L ++++ G
Sbjct: 482 RVAMRMKKVEKE-PGGSFIEVDEEVHEFIAGGGRLHRKAQEIYIVLGQLGVMLQDKG 537
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/551 (35%), Positives = 309/551 (56%), Gaps = 53/551 (9%)
Query: 16 PAKVSPPNKESTKLILR-----NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL 70
P+K + N + + + + + + CKN ++L ++HT +IK+ ++ + ++ LL
Sbjct: 14 PSKTTALNSQQKQHLRKPDHAISLLQNCKNPKDLIQLHTLLIKTSLIK--EKYAFGRLLL 71
Query: 71 FFCALSVSGSLSYATNVFSHIK-RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
F + GSL+YA +F + + + Y MI+A A N + + Y +ML
Sbjct: 72 SFASFDNLGSLNYAQKLFDTVDIPRNSFMYTTMIKAYA------NFGNPREAFAFYSRML 125
Query: 130 CTG--ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKF--------------------- 166
C + P+ TF ++ C+K G + Q++KF
Sbjct: 126 CDQRYVYPNDFTFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGE 185
Query: 167 -GVC----------DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G+ DV N +I+ ++ G + AR LFDEM RDVVSW M++GY
Sbjct: 186 VGIVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYAD 245
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
+G L A LF M KRN+ SW+++I G++Q G +ALELF+EMQ + VK D++
Sbjct: 246 AGFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAK----VKMDEVI 301
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ ++LSACA LGA+D G+W+H Y+ + G+ D + TAL+DMY KCG ++ A+ VF+E
Sbjct: 302 VTTLLSACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETG 361
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
K W++MI A++ +G++A + F +M G+ P+ +T++ +L+AC HSGLV+ G
Sbjct: 362 DKKVFVWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQ 421
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M +P + HY C++D+L RAGL +A R++ +MP++ D +W ALL C++H
Sbjct: 422 IFNRMVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLH 481
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
NVELGE+V + LI ++P N YV ++YA R+D K R MK RG++K PGCS
Sbjct: 482 RNVELGEQVGRILIKMEPQNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKN-PGCS 540
Query: 516 SVEVDGVVHEF 526
S+E++G VHEF
Sbjct: 541 SIELNGAVHEF 551
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 310/527 (58%), Gaps = 17/527 (3%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + ID CK+M+++K+ H Q+I + + H +LL L+ SLSYA +F
Sbjct: 19 LVSLIDSCKSMQQIKQTHAQLITTALIS---HPVSANKLL---KLAACASLSYAHKLFDQ 72
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT-GISPDCLTFPFLLKECTK 149
I + DL+ YN MI+A++ +++ L +++ + G+ P+ +F F C
Sbjct: 73 IPQPDLFIYNTMIKAHSLSPHSCHNS-----LIVFRSLTQDLGLFPNRYSFVFAFSACGN 127
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
L G V VK G+ ++VFV N++I ++ G V ++ +F +RD+ SWN +
Sbjct: 128 GLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTL 187
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I Y+ SG++ +A +LF M++R++ SW++II G+VQ G EAL+ F +M ++
Sbjct: 188 IAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKM----LQIGP 243
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
KP++ T+ S L+AC+ L A+D GKW+H Y+ + + + + +++DMY KCG +E A
Sbjct: 244 KPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASR 303
Query: 330 VFKEMP-KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF E K+ W AMI FA++G EA + F +M+ E + PN VTF+ LL+AC+H
Sbjct: 304 VFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGY 363
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+VE+G+ F +M Y + P + HY CM+D+LSR+GL EAE +I SMPM PDV +WGAL
Sbjct: 364 MVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGAL 423
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
L C+++ ++E G ++ + + +DP + +V L ++Y+ +GR+++ + R + R
Sbjct: 424 LNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILREKNEISRDR 483
Query: 509 KEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K++PGCSS+E+ G H+F + E+ L+ ++ +K+ G+
Sbjct: 484 KKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGY 530
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 282/481 (58%), Gaps = 6/481 (1%)
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
S+ A +F + + D+ +++ MI A +S + + +L ++M G+ P+ +T
Sbjct: 308 SVQEAREIFDRMSKRDVISWSAMI-AGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVT 366
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
F +L+ CT G ++ ++ K G D +Q ++ +++ CG + A +F +M+
Sbjct: 367 FMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA 426
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
N++VV+W + + Y++ GDL A +F M RN+ SWN +I G+ Q G + EL
Sbjct: 427 NKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSS 486
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M++ E +PD++T+ ++L AC L ++ GK VH + GL+ D V+ T+L+ MY
Sbjct: 487 MKA----EGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYS 542
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG V A VF +M +DT+AW AM++ + +G G EA D F+ M E V PN +T
Sbjct: 543 KCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTA 602
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
++SAC+ +GLV++GR F MM+ + + P HY CM+D+L RAG EAE I+SMP E
Sbjct: 603 VISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCE 662
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
PD+ VW ALLG C+ H NV+L E+ A ++++L+P + Y+ L ++YA+AGR+DD K R
Sbjct: 663 PDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVR 722
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYI 559
+M +RG++K+ G SS+E+DG +H F + + + L L+K MK G+ +
Sbjct: 723 RVMDDRGLKKD-RGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDM 781
Query: 560 R 560
R
Sbjct: 782 R 782
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 145/562 (25%), Positives = 253/562 (45%), Gaps = 106/562 (18%)
Query: 7 MVSYSLLNSPAK-------VSPPNKESTKLILRNAIDECKN---MRELKEIHTQIIKSPC 56
+ +Y+ N PAK ++ N E ++ + + C N + + ++IHT I+K+
Sbjct: 129 IAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHT-IVKAMG 187
Query: 57 LQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDT 116
++T+ + S G +S A VF + ++ ++ +I+ANA + + N+
Sbjct: 188 METD----VAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANA-QHRKLNEA 242
Query: 117 HSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQN 176
+LY+QML GISP+ +TF LL C G ++ + + G+ D+ V N
Sbjct: 243 -----FELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVAN 297
Query: 177 SVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG-----DLDVALDLFRRMKK 231
++I+++ C V AR +FD MS RDV+SW+AMI GY +SG +D L RM++
Sbjct: 298 ALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRR 357
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
+F P+K+T S+L AC GA++
Sbjct: 358 EGVF-----------------------------------PNKVTFMSILRACTAHGALEQ 382
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV--------------------------- 324
G+ +H L + G + D + TA+ +MY KCG +
Sbjct: 383 GRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIK 442
Query: 325 ----ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
A VF EMP ++ ++W MI+ +A NG + F+ M+AEG +P+ VT + +
Sbjct: 443 CGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITI 502
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYL-VEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
L AC +E+G+ V V L +E +I + S+ G +EA + M
Sbjct: 503 LEACGALAGLERGK--LVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-N 559
Query: 440 PDVFVWGALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
D W A+L G HG+ V+L +++ + + + + ++ C ++AG +
Sbjct: 560 RDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISAC---SRAGLVQEG 616
Query: 496 KKTRNLMKER---GIRKEVPGC 514
++ +M+E RK+ GC
Sbjct: 617 REIFRMMQEDFKMTPRKQHYGC 638
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 176/404 (43%), Gaps = 73/404 (18%)
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
G+ + T+ +++ C K G V+ Q+ + GV D+++ NS+I+ + V SA
Sbjct: 51 GLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASA 110
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFS--------------- 236
+F M+ RDVV+W++MI Y + A D F RM NI
Sbjct: 111 EQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNY 170
Query: 237 ------------------------WNSIITGFVQGGRAREALELFQEMQSSSV------- 265
++IT + + G A E+F +M +V
Sbjct: 171 SILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAII 230
Query: 266 ----------------EEM----VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
E+M + P+ +T S+L++C A++ G+ +H ++ GL+
Sbjct: 231 QANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLE 290
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG-----KEAFD 360
D+++ AL+ MY KC V+ A +F M K+D ++W+AMI+ +A +GY E F
Sbjct: 291 TDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQ 350
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
M EGV PN VTF+ +L AC G +E+GR + V A + ++
Sbjct: 351 LLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTA-IFNMY 409
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
++ G EAE++ M +V W + L G++ EKV
Sbjct: 410 AKCGSIYEAEQVFSKMA-NKNVVAWTSFLSMYIKCGDLSSAEKV 452
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 169/345 (48%), Gaps = 43/345 (12%)
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
D+ N++I Y + D+ A +FRRM R++ +W+S+I + +A + F+ M
Sbjct: 90 DIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMT 149
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
+++E P++IT S+L AC ++ G+ +H ++ G++ DV + TAL+ MY KC
Sbjct: 150 DANIE----PNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKC 205
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + A VF +M +++ ++WTA+I A + EAF+ + +M G+ PN VTFV LL
Sbjct: 206 GEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLL 265
Query: 382 SACA-----------HSGLVEKGRWCFVMM-----------------RHVY--LVEPHVY 411
++C HS + E+G +++ R ++ + + V
Sbjct: 266 NSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVI 325
Query: 412 HYACMIDILSRAGL-----FSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEK 463
++ MI +++G E +L+ M E P+ + ++L C HG +E G +
Sbjct: 326 SWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQ 385
Query: 464 VAQYLIDLD-PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+ L + L+ + + +MYAK G + ++ + M + +
Sbjct: 386 IHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNV 430
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 133/270 (49%), Gaps = 13/270 (4%)
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
+ GR REA++L ++ + +V + T V+ CA + GK VH L G++
Sbjct: 33 KAGRLREAIQLLGIIKQRGL--LVNSN--TYGCVIEHCAKARRFEDGKMVHKQLDELGVE 88
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
D+ +G +L++ Y K V A VF+ M +D + W++MI+ +A N + +AFDTF M
Sbjct: 89 IDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM 148
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
+ PN +TF+ +L AC + ++EKGR +++ + + E V +I + S+ G
Sbjct: 149 TDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGM-ETDVAVATALITMYSKCGE 207
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV----ELGEKVAQYLIDLDPLNHAFYVN 481
S A + M E +V W A++ H + EL E++ Q I + + +N
Sbjct: 208 ISVACEVFHKMT-ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLN 266
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C+ R ++ + + ERG+ ++
Sbjct: 267 SCNTPEALNRG---RRIHSHISERGLETDM 293
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/513 (36%), Positives = 286/513 (55%), Gaps = 35/513 (6%)
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQML 129
F A S ++ A + F++++ ++ +N +IR C SE H Y ML
Sbjct: 16 FISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQALVH-------YMHML 68
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
+ P +F L+K CT +D G +V+G V K G VFVQ ++I + G V
Sbjct: 69 RNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVG 128
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
+R +FD+M RDV +W MI ++R GD+ A LF M ++N+ +WN++I G+ + G
Sbjct: 129 GSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGN 188
Query: 250 AREALELFQEMQSSSV----------------EEMVK-----------PDKITIASVLSA 282
A A LF +M + + +E++ PD++T+ +V+SA
Sbjct: 189 AESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISA 248
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
CA+LGA+ GK VH YL G D DV IG++L+DMY KCG ++ A VF ++ K+ W
Sbjct: 249 CAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCW 308
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
+I A +GY +EA F EME + +RPN VTF+ +L+AC H+G +E+GR F+ M
Sbjct: 309 NCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQ 368
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
Y + P V HY CM+D+LS+AGL +A +IR+M +EP+ F+WGALL GC++H N+E+
Sbjct: 369 DYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAH 428
Query: 463 KVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGV 522
Q L+ L+P N Y L +MYA+ R+++V K R MK+ G+ K PG S VE++
Sbjct: 429 IAVQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKT 488
Query: 523 VHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
VH F+ + +L L+L L ++ G+
Sbjct: 489 VHLFAASDTYHPSYSQLHLLLAELDDQLRLAGY 521
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 181/501 (36%), Positives = 303/501 (60%), Gaps = 26/501 (5%)
Query: 31 LRNAIDECKNMRELKEIHTQIIK-----SPCLQTNDHHSLITRLLFFCALSVSGSLSYAT 85
L A+ K++ E EIH K P +QT + R+ C G ++ A
Sbjct: 128 LLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTG-----LVRMYAAC-----GRIAEAR 177
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
+F + D+ T++IMI C+S ND L L+++M + PD + +L
Sbjct: 178 LMFDKMFHRDVVTWSIMIDG-YCQSGLFNDA-----LLLFEEMKNYNVEPDEMMLSTVLS 231
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
C + + G ++ +++ + D +Q+++++++ +CG + A LF++M+ +++V+
Sbjct: 232 ACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVA 291
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
AM+ GY + G ++ A +F +M K+++ W+++I+G+ + +EAL LF EMQS +
Sbjct: 292 STAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGI 351
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
KPD++T+ SV++ACA+LGA+D KW+H ++ ++G + I AL++MY KCG +E
Sbjct: 352 ----KPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLE 407
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
RA +F +MP+K+ ++WT MIS FA++G A F +ME E + PN +TFVG+L AC+
Sbjct: 408 RARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACS 467
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
H+GLVE+GR F M + + + P HY CM+D+ RA L EA L+ +MP+ P+V +W
Sbjct: 468 HAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIW 527
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
G+L+ C++HG +ELGE A+ L++LDP + +V L ++YAKA R++DV + R LMK +
Sbjct: 528 GSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHK 587
Query: 506 GIRKEVPGCSSVEVDGVVHEF 526
GI KE GCS E++ +HEF
Sbjct: 588 GISKE-RGCSRFELNNEIHEF 607
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 230/464 (49%), Gaps = 90/464 (19%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFF-CALSVSGSLSYATNVFS 89
L +A+ ++ LK++H QI++S ++ SL+ +L+ CALS SL YA +VF+
Sbjct: 26 LFSALSSATSLTHLKQVHAQILRSKLDRST---SLLVKLVISSCALS--SSLDYALSVFN 80
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
I + + + N +R +S E T L +Y++M G++ D +FP LLK ++
Sbjct: 81 LIPKPETHLCNRFLR-ELSRSEEPEKT-----LLVYERMRTQGLAVDRFSFPPLLKALSR 134
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+ G ++G K G D FVQ ++ ++ ACG + AR++FD+M +RDVV+W+ M
Sbjct: 135 VKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIM 194
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I GY +SG + AL LF MK N V
Sbjct: 195 IDGYCQSGLFNDALLLFEEMKNYN-----------------------------------V 219
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC------ 323
+PD++ +++VLSAC G + +GK +H ++ + + D + +ALV MY CG
Sbjct: 220 EPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALN 279
Query: 324 -------------------------VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
+E A VF +M KKD + W+AMIS +A + +EA
Sbjct: 280 LFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEA 339
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA---- 414
+ F EM++ G++P+ VT + +++ACAH G +++ +W H++ V+ + + A
Sbjct: 340 LNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWI-----HLF-VDKNGFGGALPIN 393
Query: 415 -CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+I++ ++ G A R+ MP + +V W ++ MHG+
Sbjct: 394 NALIEMYAKCGSLERARRIFDKMPRK-NVISWTCMISAFAMHGD 436
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 196/560 (35%), Positives = 302/560 (53%), Gaps = 74/560 (13%)
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
H + + ++ C+ S + +Y +F IK+ +++ +N MIR +ND
Sbjct: 44 HDNYLLNMILRCSFDFSDT-NYTRFLFHQIKQPNIFLWNTMIRGLV-----SNDCFD-DA 96
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
++ Y M G P+ TFPF+LK C + LD +G ++ VVK G DVFV+ S++ L
Sbjct: 97 IEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCL 156
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK---------- 231
+ CG++ A +FD++ +++VVSW A+I GY+ G A+D+FRR+ +
Sbjct: 157 YAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTI 216
Query: 232 -----------------------------RNIFSWNSIITGFVQGGRAREALELFQEMQS 262
RN+F S++ + + G +A +F M
Sbjct: 217 VRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPE 276
Query: 263 SSV---------------------------EEMVKPDKITIASVLSACAYLGAIDHGKWV 295
+ E VKPD T+ VLSACA LGA++ G+WV
Sbjct: 277 KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWV 336
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
G + R+ + V+GTAL+D+Y KCG + RA+ VFK M +KD + W A+IS A+NGY
Sbjct: 337 SGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYV 396
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
K +F F ++E G++P+ TF+GLL C H+GLV++GR F M + + P + HY C
Sbjct: 397 KISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGC 456
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
M+D+L RAGL EA +LIR+MPME + VWGALLG C++H + +L E + LI+L+P N
Sbjct: 457 MVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWN 516
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
YV L ++Y+ ++D+ K R M E+ I+K PGCS +EVDG+VHEF + +
Sbjct: 517 SGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKP-PGCSWIEVDGIVHEFLVGDKYHPL 575
Query: 536 KEELVLILNGLSKIMKNGGF 555
E++ L+ L+K MK G+
Sbjct: 576 SEKIYAKLDELTKKMKVAGY 595
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 191/411 (46%), Gaps = 81/411 (19%)
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTS----ARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+FG+C D N ++++ + C F S R LF ++ ++ WN MI G + + D
Sbjct: 39 RFGLCHD----NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFD 94
Query: 221 VALDLFRRMKKR---------------------------------------NIFSWNSII 241
A++ + M+ ++F S++
Sbjct: 95 DAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLV 154
Query: 242 TGFVQGGRAREALELFQEMQSSSV---------------------------EEMVKPDKI 274
+ + G +A ++F ++ +V E + PD
Sbjct: 155 CLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSF 214
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
TI VLSAC LG ++ G+W+H + G+ +V +GT+LVDMY KCG +E+A VF M
Sbjct: 215 TIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGM 274
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
P+KD ++W AMI +ALNG KEA D F +M+ E V+P+ T VG+LSACA G +E G
Sbjct: 275 PEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGE 334
Query: 395 WCFVMM-RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
W ++ R+ +L P + +ID+ ++ G S A + + M E D VW A++ G
Sbjct: 335 WVSGLVDRNEFLYNPVL--GTALIDLYAKCGSMSRAWEVFKGMK-EKDRVVWNAIISGLA 391
Query: 454 MHGNVELGEKVAQYL--IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
M+G V++ + + + + P + F LC AG D+ ++ N M
Sbjct: 392 MNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGC-THAGLVDEGRRYFNSM 441
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 198/515 (38%), Positives = 295/515 (57%), Gaps = 20/515 (3%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M LK+I +++ T LI LL S+ YA +F I + ++ YN
Sbjct: 1 MNRLKQIQAYTLRNGIEHTKQ---LIVSLLQI------PSIPYAHKLFDFIPKPTVFLYN 51
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+I+A + ++ H +C LY QM G SP+ +F FL C G ++
Sbjct: 52 KLIQAYS-----SHGPHH-QCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLH 105
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
VK G DVF +++ ++ G ++ AR FDEM+ RDV +WN+MI GY R GDL+
Sbjct: 106 THFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLE 165
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
AL+LFR M RN+ SW ++I+G+ Q G+ +AL +F M+ E ++P+++T+ASVL
Sbjct: 166 GALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEE---ETEMRPNEVTLASVL 222
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
ACA LGA++ G+ + Y R +G ++ + AL++MY +CG +++A+GVF+E+ + L
Sbjct: 223 PACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNL 282
Query: 341 -AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+W +MI A++G EA + F +M EG P+ VTFVG+L AC H G+V +G+ F
Sbjct: 283 CSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFES 342
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + + P + HY CM+D+L RAG EA LI MPMEPD VWG LLG C HG+VE
Sbjct: 343 MERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVE 402
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
L EK A L +L+P N YV L ++YA AGR+D V + R LMK I K G S +E
Sbjct: 403 LAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITK-AAGYSFIEE 461
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
G +H+F ++ +E+ +L+ +S MK G
Sbjct: 462 GGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHG 496
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 191/509 (37%), Positives = 298/509 (58%), Gaps = 14/509 (2%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M++ K+IH I + + + + +R+L F ALS G YA +F+HI +++ YN
Sbjct: 1 MKQTKQIHAHAITNNLTRFS---YISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+I +S T ++ K ++ +ML T I P+ TF L+K C L L V+
Sbjct: 58 SII------TSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVS-LSSL--EQVF 108
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+K G DV+ +SVI+ F + AR +FDE SNR+VV W +++ GY G ++
Sbjct: 109 TLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVN 168
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE-EMVKPDKITIASV 279
A D+F +M RN S++++++G+V+ G E ++LF+E++ +K + + SV
Sbjct: 169 EARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSV 228
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
L+AC +GA + GKW+H Y+ +GL+ D+ +GTAL+D Y KCG V+ A VF +MP KD
Sbjct: 229 LNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDV 288
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
W+AMI A+NG K A + F +ME G +PN VTFVG+L+AC H L + F +
Sbjct: 289 ATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGI 348
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M Y + P + HY C++D+L+R+G +A I SM +EPD +WG+LL GC MHG+ E
Sbjct: 349 MSEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYE 408
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LG+KV +YLI+ +P + YV L +MYA G+++ V + R LMK+RG+ V G S +E+
Sbjct: 409 LGQKVGKYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMI-VSGWSFIEI 467
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSK 548
D +H+F + E+ +L+ L K
Sbjct: 468 DQTIHKFFADDKCCLYSREIYDVLSHLGK 496
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 306/534 (57%), Gaps = 16/534 (2%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PNK + +++ A E ++ + +H IKS + L C S G L
Sbjct: 131 PNKYTFPFLIK-AAAEVSSLSLGQSLHGMAIKSAV----GSDVFVANSLIHCYFSC-GDL 184
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A VF+ IK D+ ++N MI K S K L+L+K+M + +T
Sbjct: 185 DSACKVFTTIKEKDVVSWNSMINGFVQKGS------PDKALELFKKMESEDVKASHVTMV 238
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
+L C K D G V + + V ++ + N+++ ++ CG + A+ LFD M +
Sbjct: 239 GVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 298
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
D V+W M+ GY S D + A ++ M K++I +WN++I+ + Q G+ EAL +F E+Q
Sbjct: 299 DNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQ 358
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
+++ +K ++IT+ S LSACA +GA++ G+W+H Y++++G+ + + +AL+ MY KC
Sbjct: 359 ---LQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKC 415
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G +E+A VF + K+D W+AMI A++G G EA D F +M+ V+PN VTF +
Sbjct: 416 GDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVF 475
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
AC+H+GLV++ F M Y + P HYAC++D+L R+G +A + I +MP+ P
Sbjct: 476 CACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPS 535
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
VWGALLG C++H N+ L E L++L+P N +V L ++YAK+G++D+V + R
Sbjct: 536 TSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKH 595
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
M+ G++KE PGCSS+E+DG++HEF + + E++ L+ + + +K+ G+
Sbjct: 596 MRVTGLKKE-PGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 648
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 237/493 (48%), Gaps = 90/493 (18%)
Query: 2 SKKLQMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTND 61
++ L + + ++P + + N+ S I + ID C ++R+LK+ H +I++ +D
Sbjct: 7 AQPLSLPRHPNFSNPNQPTTNNERSRHTI--SLIDRCSSLRQLKQTHAHMIRTGMF--SD 62
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
+S ++L ALS SL YA VF I + + +T+N +IRA A +
Sbjct: 63 PYS-ASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWA--- 118
Query: 122 LKLYKQMLCTGIS--PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ M+ + P+ TFPFL+K + +G S++G +K V DVFV NS+I
Sbjct: 119 ---FLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLI 175
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
+ +CG + SA +F + +DVVSWN+MI G+++ G D AL+LF++M+
Sbjct: 176 HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES-------- 227
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
E VK +T+ VLSACA + ++ G+ V Y+
Sbjct: 228 ---------------------------EDVKASHVTMVGVLSACAKIRDLEFGRRVCSYI 260
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVF---------------------------- 331
+ ++ ++ + A++DMY KCG +E A +F
Sbjct: 261 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 320
Query: 332 ---KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHS 387
MPKKD +AW A+IS + NG EA F E++ + ++ N +T V LSACA
Sbjct: 321 EVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQV 380
Query: 388 GLVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
G +E GRW H Y+ ++ + Y + +I + S+ G +A + S+ + DVF
Sbjct: 381 GALELGRWI-----HSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVE-KRDVF 434
Query: 444 VWGALLGGCQMHG 456
VW A++GG MHG
Sbjct: 435 VWSAMIGGLAMHG 447
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 4/248 (1%)
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
L+ A +F + + N F+WN++I + G ++ F +M SS E P+K T
Sbjct: 79 ASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSS--ESQCYPNKYTF 136
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
++ A A + ++ G+ +HG +S + DV + +L+ Y CG ++ A VF + +
Sbjct: 137 PFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 196
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD ++W +MI+ F G +A + F++ME+E V+ +HVT VG+LSACA +E GR
Sbjct: 197 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRV 256
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ V ++ M+D+ ++ G +A+RL +M E D W +L G +
Sbjct: 257 CSYIEE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISE 314
Query: 457 NVELGEKV 464
+ E +V
Sbjct: 315 DYEAAREV 322
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 313/589 (53%), Gaps = 47/589 (7%)
Query: 2 SKKLQMVSYSLLN--SPAKVS----PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSP 55
+ L+ ++ S+ N SP +S PP+ S K L N I C + EL + +IK
Sbjct: 104 TNALKQLTRSIGNFVSPPSISMPLQPPSCPSFKQTLLNRIKNCSTINELHGLCASMIK-- 161
Query: 56 CLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETN 114
TN F A S+ Y F+ ++ +++ YN MI+ C
Sbjct: 162 ---TNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCG----- 213
Query: 115 DTHSGKCLKLYKQMLC-TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF 173
+ + L+ Y ML + + P TF L+K CT +G V+ + K G +F
Sbjct: 214 --YPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLF 271
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRN 233
VQ +++ + ++ AR +FDEM RD +W AM+ R GD+D A LF M +RN
Sbjct: 272 VQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEEMPERN 331
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSV-----------------------EEM-- 268
+WN++I G+ + G A LF +M + + EM
Sbjct: 332 TATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRL 391
Query: 269 --VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+ PD++T+++V SACA++GA++ GK +H Y+ GL+ DV IG+ALVDMY KCG ++
Sbjct: 392 NGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDL 451
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
+ +F ++ K+ W A+I A++GY ++A F ME E + PN VTF+ +LSAC H
Sbjct: 452 SLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTH 511
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+GLV++GR F+ M Y + P + HY CM+D+LS++G +EA LI+SM EP+ +WG
Sbjct: 512 AGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWG 571
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALL GC++HGN E+ E + L+ L+P+N Y L MYA+ + +V R++MKE+G
Sbjct: 572 ALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKG 631
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ K+ PG S +E++G +H+FS +++ +L L +K G+
Sbjct: 632 VEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFVLTELDGQLKLAGY 680
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 298/529 (56%), Gaps = 37/529 (6%)
Query: 26 STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYAT 85
+T + + + + K++ E+++ H ++K+ D S + F ++SYA
Sbjct: 7 TTPVPILSFTERAKSLLEIQQAHAFMLKTGLFH--DTFSASKLVAFAATNPEPKTVSYAH 64
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
++ + I+ + +T+N +IRA A N + L ++++ML + PD +F F+LK
Sbjct: 65 SILNRIESPNGFTHNSVIRAYA------NSSTPEIALTVFREMLLGPVFPDKYSFTFVLK 118
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
C G ++G +K + DVFV+N++I+++ G+ AR + D M RD VS
Sbjct: 119 ACAAFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVS 178
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
WN+++ YL G ++ A LF M++RN+ SWN +I+G+ G +EA E+F M V
Sbjct: 179 WNSLLSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDV 238
Query: 266 ----------------------------EEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
+ +PD T+ +VLSACA LG++ G+WVH
Sbjct: 239 VSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHV 298
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
Y+ + G++ + + TALVDMY KCG +++A VF++ K+D W ++I+ +++G GK+
Sbjct: 299 YIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKD 358
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
A + F EM EG +PN +TF+G+LSAC H GL+++ R F MM VY +EP + HY CM+
Sbjct: 359 ALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMV 418
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L R G F EAE L+ +P + + +LLG C+ G +E E++A L++ +P +
Sbjct: 419 DLLGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESS 478
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV + ++YA GR+D+ + R M+ ++K PGCS +EVDGVVHEF
Sbjct: 479 GYVQMSNLYASHGRWDEAMEVRGKMRAERVKKN-PGCSMIEVDGVVHEF 526
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/519 (37%), Positives = 297/519 (57%), Gaps = 24/519 (4%)
Query: 10 YSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
Y+ L P + T + + C L+++H +II+ Q H +I++
Sbjct: 55 YTALTFPDYLPTLRSFDTTSSISTLLKACTTTSTLEQVHARIIRKGLHQ---DHFIISQF 111
Query: 70 LFFC-ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM 128
L C +LS + SY T+VF+ + +N I+ + + + L+ +M
Sbjct: 112 LTLCNSLS---NFSYTTSVFNGVSSPSTVLWNTYIKGY------SENYSVSLTVSLFIRM 162
Query: 129 LCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFV 188
+ PD T+P L+K C+K G + +G V+ GV DVFV S+I L+ CG +
Sbjct: 163 KRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEI 222
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
AR +FDEM R+VVSW AMI GY DL A LF M ++N SWN+II+G+V+ G
Sbjct: 223 LCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCG 282
Query: 249 RAREALELFQEMQ---------SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
R A ++F EM S+ + VKPD+ + S++SAC+ +G+++ KWV Y+
Sbjct: 283 DLRSARKMFDEMPHRNRDVVAWSALISGNVKPDEFIMVSLMSACSQMGSLELAKWVDDYV 342
Query: 300 RRSGLDCDVV-IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
R+S +D + AL+DM KCG ++RA +F+EMPK+D +++ +M+ +++G G +A
Sbjct: 343 RKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQA 402
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F M EG+ P+ V F +L+AC+ +GLV++G + F M+ Y + P HYACM+D
Sbjct: 403 VSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVD 462
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+L RAG EA L++SMP+EP WGALLG C++H ++ELGE VA L +L+P N
Sbjct: 463 LLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGN 522
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
YV L ++YA A ++ DV RN M+ERGIRK +PGCS +
Sbjct: 523 YVLLSNIYAAAEQWLDVSLLRNKMRERGIRK-IPGCSWI 560
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/603 (33%), Positives = 312/603 (51%), Gaps = 89/603 (14%)
Query: 13 LNSPAKVSPPNKESTKLILRNAIDE-------CKNMRELKEIHTQIIKSPCLQTNDHHSL 65
++ P ++S P + T + R +E C + +KE+H QIIK N H+ L
Sbjct: 1 MSRPVRMSLPTRAPTWVSTRRLFEEKLQDLHKCTDFNHIKEVHAQIIKR-----NLHNDL 55
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
A S+ ++ A NVF+ I+ +++ YN +IRA+ ++ S K +
Sbjct: 56 YVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAH------VQNSQSLKAFATF 109
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
M G+ D T+PFLLK C + ++ V K+G D+FV NS+I + C
Sbjct: 110 FDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKC 169
Query: 186 GFVT---------------------------------SARMLFDEMSNRDVVSWNAMIIG 212
G + AR LFDEM+ RD VSWN ++ G
Sbjct: 170 GLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDG 229
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNS-------------------------------II 241
Y+++G++ A +LF +M +RN+ SW++ II
Sbjct: 230 YVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIII 289
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
+GF + G A+EA L+ +M+++ + KPD T+ S+L+ACA G + GK VH +++
Sbjct: 290 SGFAEKGLAKEATTLYNQMEAAGL----KPDDGTLISILAACAESGLLVLGKKVHASIKK 345
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
+ C V + ALVDMY KCG V++A +F EM +D ++W M+ A++G+G++A
Sbjct: 346 IRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQL 405
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F +M+ EG +P+ VT + +L AC H+G V++G F M + + PH+ HY CMID+L
Sbjct: 406 FSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLG 465
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
R G EA RL++SMPMEP+ +WG LLG C++H V L EKV LI L+ + Y
Sbjct: 466 RGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSM 525
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM--KGSPKVVKEEL 539
L +++A AG ++ V R MK G++K G SS+E+D VHEF++ K P+ K
Sbjct: 526 LSNIFAAAGDWNSVANMRLQMKSTGVQKP-SGASSIELDDEVHEFTVFDKSHPETDKIYQ 584
Query: 540 VLI 542
+L+
Sbjct: 585 ILV 587
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/512 (36%), Positives = 288/512 (56%), Gaps = 20/512 (3%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M +LK+IH +++ T LI +LL L YA +F I + +Y YN
Sbjct: 1 MNQLKQIHAYSLRNGLDHTK---FLIEKLLQL------PDLPYACTLFDQIPKPSVYLYN 51
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
I+ + ++ H +C LY QM G SP+ +F FL C + G ++
Sbjct: 52 KFIQ------TFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLH 105
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
K G D+F +++ ++ G + SAR LFDEM RD+ +WN++I GY RSG ++
Sbjct: 106 SHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHME 165
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
AL+LF +M RN+ SW ++I+G+ Q G+ +ALE+F +++ E+ KP++++IASVL
Sbjct: 166 AALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLEN---EKGTKPNEVSIASVL 222
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
AC+ LGA+D GK + Y R +G + + A+++++ +CG +E A VF E+ K L
Sbjct: 223 PACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNL 282
Query: 341 -AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+W MI A++G +A + +M +RP+ VTFVGLL AC H G+V +GR F
Sbjct: 283 CSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFES 342
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + V P + HY C++D+L RAG EA LI++MPM PD +WG LLG C HGNVE
Sbjct: 343 MESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVE 402
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LGE A+ L L+P N YV L ++YA AG + V + R +MK I K G S +EV
Sbjct: 403 LGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRA-GYSYIEV 461
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+HEF ++ + E+ +L+ + I+K
Sbjct: 462 GDGIHEFIVEDRSHLKSGEIYALLHKIYDIIK 493
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/462 (38%), Positives = 279/462 (60%), Gaps = 16/462 (3%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A VF + D ++NIMI A K H+ + LK +M+ G+ PD T L
Sbjct: 181 AYQVFQQMAAPDAVSFNIMIFGYAKKG------HNIEALKFLHEMVGLGLKPDEFTMLGL 234
Query: 144 LKECTKRLDGLVGASVYGQVVKFGV--CDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
L C + D +G SV+ + + G+ ++ + N+++ +++ C + A+ +F+ + +
Sbjct: 235 LICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRK 294
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
D +SWN MI GY + G+L++A + F M R++ SWNSII G+ Q G LF+ M
Sbjct: 295 DTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENM- 353
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
V E + PD +TI +++SA A +GA+ HG+W+HG++ R + D +G+A +DMY KC
Sbjct: 354 ---VAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKC 410
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G ++RA VF+E+ +KD WT MI+ FA +GYG +A F EM+ E V PN VTFV +L
Sbjct: 411 GSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQ-EYVMPNQVTFVAVL 469
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
+AC+HSG V +G F M+ Y +EP V HY C++D+L R+G FSE + +I MPM+P
Sbjct: 470 TACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPS 529
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+WGA+L C+ +GN+E+ E + L+ L+P YV L ++YA +GR+ K R +
Sbjct: 530 RSIWGAVLSACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREI 589
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEF--SMKGSPKVVKEELVL 541
M+ RG++K GCSSV VDG++HEF + K P+ ++ + +L
Sbjct: 590 MESRGVKK-TAGCSSVVVDGIIHEFVAADKRHPRWIEIQSIL 630
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 136/541 (25%), Positives = 230/541 (42%), Gaps = 108/541 (19%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCL-QTNDHHSLITRLLFFCALSV 77
VS K +T ++L ++C K+I QI++ + QT ++RL+ F A++
Sbjct: 26 VSLALKHATLILL----EKCSTRDHFKQILAQIMRINLIGQTFP----MSRLILFSAITH 77
Query: 78 SGSLSYATNVF-SHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPD 136
+L A +F H +LY YN MI A + +++ Y +L + I P+
Sbjct: 78 PENLDMAVLLFRHHTPHPNLYIYNTMISALSLSLNQS--------FAFYNSLLSSCIYPN 129
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
TF FLL + +K L ++ ++ + G ++QN+++ +
Sbjct: 130 RSTFLFLL-QASKFLSQVM--QIHCHAIITGSFYYGYLQNTLMKI--------------- 171
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
YL + + +A +F++M + S+N +I G+ + G EAL+
Sbjct: 172 ----------------YLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKF 215
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL--DCDVVIGTAL 314
EM V +KPD+ T+ +L C LG GK VH ++ R GL ++++ AL
Sbjct: 216 LHEM----VGLGLKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNAL 271
Query: 315 VDMYGKC-------------------------------GCVERAYGVFKEMPKKDTLAWT 343
+DMY KC G +E A+ F++MP +D ++W
Sbjct: 272 LDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWN 331
Query: 344 AMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV 403
++I+ +A G F M AE + P+ VT + L+SA A G + GRW H
Sbjct: 332 SIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWI-----HG 386
Query: 404 YLVEPHV----YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
++V + + + ID+ + G A + R + E DV VW ++ G HG
Sbjct: 387 WVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVT-EKDVTVWTTMITGFAFHG--- 442
Query: 460 LGEKVAQYLIDLDPL---NHAFYVNLCDMYAKAGRFDDVKKTRNLMKER-GIRKEVP--G 513
G K Q ++ N +V + + +G + N MKER GI V G
Sbjct: 443 YGSKALQLFYEMQEYVMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYG 502
Query: 514 C 514
C
Sbjct: 503 C 503
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 147/340 (43%), Gaps = 65/340 (19%)
Query: 25 ESTKLILRNAIDE----CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
+S+ LIL NA+ + CK +R + I I++ + N + G+
Sbjct: 261 KSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNT---------MIAGYAKVGN 311
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCL---KLYKQMLCTGISPDC 137
L A N F + DL ++N +I A K G CL +L++ M+ I PD
Sbjct: 312 LEIAHNFFEDMPCRDLVSWNSIIAGYAQK---------GDCLMVQRLFENMVAENIWPDF 362
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T L+ + G ++G VV+ + D F+ ++ I ++ CG + A M+F E
Sbjct: 363 VTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFRE 422
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
++ +DV W MI G F G +AL+LF
Sbjct: 423 VTEKDVTVWTTMITG-------------------------------FAFHGYGSKALQLF 451
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR-RSGLDCDVVIGTALVD 316
EMQ E V P+++T +VL+AC++ G + G + ++ R G++ V LVD
Sbjct: 452 YEMQ-----EYVMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVD 506
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLA-WTAMISVFALNGYG 355
+ G+ G V + MP K + + W A++S A YG
Sbjct: 507 LLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLS--ACRAYG 544
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/477 (37%), Positives = 277/477 (58%), Gaps = 11/477 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F +L YN ++ S+ + + L + +ML G PD +
Sbjct: 280 GDICAARQIFDECANKNLVMYNTIM------SNYVHHEWASDVLVILDEMLQKGPRPDKV 333
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T + C + D VG S + V++ G+ + N++I ++M CG +A +F+ M
Sbjct: 334 TMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHM 393
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
N+ VV+WN++I G +R GD+++A +F M +R++ SWN++I VQ EA+ELF+
Sbjct: 394 PNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFR 453
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ+ + D++T+ + SAC YLGA+D KWV Y+ ++ + D+ +GTALVDM+
Sbjct: 454 EMQNQGI----PGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMF 509
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
+CG A VFK M K+D AWTA I V A+ G + A + F EM + V+P+ V FV
Sbjct: 510 SRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFV 569
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
LL+AC+H G V++GR F M + + PH+ HY CM+D+L RAGL EA LI+SMP+
Sbjct: 570 ALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPI 629
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EP+ VWG+LL C+ H NVEL A+ L L P +V L ++YA AG++ DV +
Sbjct: 630 EPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARV 689
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R MKE+G++K VPG SS+EV G++HEF+ + L+L ++ + G+
Sbjct: 690 RLQMKEKGVQK-VPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGY 745
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 222/475 (46%), Gaps = 57/475 (12%)
Query: 8 VSYSLLNSPAKVSPPNKESTKLILRNA----IDECKNMRELKEIHTQIIKSPCLQTNDHH 63
++ +L S + P + + I RN+ + CK ++ELK++H ++K L
Sbjct: 1 MATTLFPSSTLLVPASLKEANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPAS 60
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHI--KRSDLYTYNIMIRANACKSSETNDTHSGKC 121
+L + + SL YA N F + L+ YN +IR A S+ D +
Sbjct: 61 NLNKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYA--SAGLGD----QA 114
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
+ LY QML GI PD TFPFLL C+K L G V+G V+K G+ D+FV NS+I
Sbjct: 115 ILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHF 174
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG V D+ LF M +RN+ SW S+I
Sbjct: 175 YAECGKV-------------------------------DLGRKLFDGMLERNVVSWTSLI 203
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
G+ ++EA+ LF +M + VE P+ +T+ V+SACA L ++ GK V Y+
Sbjct: 204 NGYSGRDLSKEAVSLFFQMGEAGVE----PNPVTMVCVISACAKLKDLELGKKVCSYISE 259
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
G++ ++ ALVDMY KCG + A +F E K+ + + ++S + + + +
Sbjct: 260 LGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVI 319
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY----ACMI 417
EM +G RP+ VT + ++ACA G + G+ H Y++ + + +I
Sbjct: 320 LDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGK-----SSHAYVLRNGLEGWDNISNAII 374
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
D+ + G A ++ MP V W +L+ G G++EL ++ +++ D
Sbjct: 375 DMYMKCGKREAACKVFEHMP-NKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERD 428
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 186/494 (37%), Positives = 290/494 (58%), Gaps = 21/494 (4%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL-FFCALSVSGSLSYATNVFSHIKRSD 95
C + K++H I ++ Q++ +IT LL F L +Y +FS + +
Sbjct: 20 HCTTLNHAKQLHAHIYRNNLHQSS---YVITNLLRFITTLPHIPVHTYPHLLFSQVHSPN 76
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
+ Y+ +IRA A H ++LY ML +SP TF L + +
Sbjct: 77 PFLYSALIRAYA----RNGPFHHS--IRLYTSMLNNNVSPVSFTFSALFSLLK---NPSL 127
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G+ ++ FG +D++V N++I +++ G + AR +FDEM +RDVV+W +I+ Y R
Sbjct: 128 GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYAR 187
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
SGD+D A +LF + +++ +W S++TG+ Q ++AL+ F++M+ E V D+IT
Sbjct: 188 SGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMR----EAGVVTDEIT 243
Query: 276 IASVLSACAYLGAIDHGKWVHGYLR--RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+ +SACA LG + W+ R G +V +G+AL+DMY KCG VE AY VFK
Sbjct: 244 LVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKG 303
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M + + ++++MI FA++G + A F EM G++PNHVTFVGL +AC+H+G+VE+G
Sbjct: 304 MKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQG 363
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
+ F M+ Y V P HYACM D+L RAG +A +L+++MPMEP+ VWGALLG
Sbjct: 364 QQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASH 423
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
+HGN ++ E ++ L +L+P N Y+ L YA A ++DDV + R LM+E+ +RK PG
Sbjct: 424 IHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKN-PG 482
Query: 514 CSSVEV-DGVVHEF 526
CS VE +G++HEF
Sbjct: 483 CSWVEAKNGIIHEF 496
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/498 (36%), Positives = 293/498 (58%), Gaps = 18/498 (3%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK 92
+D CKN+ ++K++H +I+ + Q+ + + R L + V Y ++F+ +
Sbjct: 51 TTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVD---PYPLSIFNQVN 107
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
+ + YN +IR + T + Y M G+ P TF L K C ++D
Sbjct: 108 YPNPFLYNALIRGYLIEERLKEST------EFYSLMRKEGVVPVSFTFTALFKACGAKMD 161
Query: 153 GLVGASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
+G ++GQ + G +D+ V NS+I +++ CGF+ R +FDEM NRDV+SW +I
Sbjct: 162 VGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELIS 221
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
Y++SG+++ A +LF + +++ +W +++GF Q + REA+ F++MQ VE
Sbjct: 222 AYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVET---- 277
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRS--GLDCDVVIGTALVDMYGKCGCVERAYG 329
D+IT+ V+SACA LGA + W+ +S G VV+G+AL+DMY KCG V AY
Sbjct: 278 DEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYR 337
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF+ M +++ ++++MI FA++G +A F EM ++PN VTF+G+L+AC+H+G+
Sbjct: 338 VFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGM 397
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
VE+G F +M Y ++P HY CM+D+L RAG EA L+++MP+EP VWGALL
Sbjct: 398 VEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALL 457
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G C++H + ++ A +L +L+P Y+ L ++YA GR++DV R LM+ RG+RK
Sbjct: 458 GACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRK 517
Query: 510 EVPGCSSVEVD-GVVHEF 526
P S +E + G+VHEF
Sbjct: 518 N-PAFSWIESEKGMVHEF 534
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/487 (37%), Positives = 294/487 (60%), Gaps = 19/487 (3%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S GS++ A VFS + +L T+N +I + + + + L+++ +M+ +G+ P
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLI------TCYEQNGPASEALEVFVRMMDSGLEP 246
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARML 194
D +T ++ C G ++ +VVK DD+ + N+++ ++ C V AR +
Sbjct: 247 DEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRV 306
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD MS R+VVS +M+ GY R+ + A +F +M +RN+ SWN++I G+ Q G EAL
Sbjct: 307 FDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEAL 366
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH------GYLRRSGLDCDV 308
LF+ ++ E + P T ++LSACA L + G+ H G+ +SG + D+
Sbjct: 367 RLFRLLK----RESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDI 422
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
+G +L+DMY KCG +E VF++M ++D ++W A+I +A NGYG EA FR+M
Sbjct: 423 FVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVC 482
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
G +P+HVT +G+L AC+H+GLVE+GR F M L+ P HY CM+D+L RAG +E
Sbjct: 483 GEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLI-PLKDHYTCMVDLLGRAGCLNE 541
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A+ LI +MP+ PD VWG+LL C++HGN+E+G+ A+ L+++DP N YV L +MYA+
Sbjct: 542 AKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAE 601
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
GR+ DV + R LM+++G+ K+ PGCS +EV+ VH F +K ++++ +L L++
Sbjct: 602 LGRWGDVVRVRKLMRQQGVTKQ-PGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTE 660
Query: 549 IMKNGGF 555
MK G+
Sbjct: 661 QMKRVGY 667
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 158/309 (51%), Gaps = 14/309 (4%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
P+ F LL C + V+ +++ ++F+QN +I ++ C + AR L
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD M R+ +WN++I +SG LD A LF M + + SWNS+++GF Q R E+L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
E F +M E ++ + S LSACA L ++ G VH + +S DV +G+AL
Sbjct: 133 EYFVKMH----REDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSAL 188
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+DMY KCG V A VF M +++ + W ++I+ + NG EA + F M G+ P+
Sbjct: 189 IDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDE 248
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY-----ACMIDILSRAGLFSEA 429
VT ++SACA +++G + H +V+ + + ++D+ ++ +EA
Sbjct: 249 VTLASVVSACASLCALKEG-----LQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEA 303
Query: 430 ERLIRSMPM 438
R+ M +
Sbjct: 304 RRVFDRMSI 312
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
V ++ P+ A +L +C + + VH + + ++ I L+D+YGKC C+
Sbjct: 7 VRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCL 66
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
+ A +F MP+++T W ++ISV +G+ EA F M P+ ++ ++S
Sbjct: 67 DDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVSGF 122
Query: 385 AHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLF-----SEAERLIRSMPM 438
A E+ FV M R +L+ + + A + + AGL ++ L+
Sbjct: 123 AQHDRFEESLEYFVKMHREDFLLNEYSFGSA----LSACAGLMDLNMGTQVHALVSKSRY 178
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
DV++ AL+ G+V E+V +I+
Sbjct: 179 STDVYMGSALIDMYSKCGSVACAEEVFSGMIE 210
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 185/489 (37%), Positives = 290/489 (59%), Gaps = 17/489 (3%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS-YATNVFSHIKRSDLYTY 99
+ ++K+ H +I+ L + + + LL F A+S S S YA ++++ I ++
Sbjct: 44 ITQIKQAHARIL---VLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFAT 100
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGAS 158
N MIR C HS + LY M + ++ P+ T F+L+ C+ GA
Sbjct: 101 NNMIR---CFVKGDLPRHS---ISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQ 154
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM-SNRDVVSWNAMIIGYLRSG 217
V V+K G DVFV+N++I L+ C V SA+ +FDE+ S+RDVVSWN+MI+G++R G
Sbjct: 155 VQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLG 214
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
+ VA LF M ++++ SW +II+G VQ G +AL+ F+E+ E+ ++P++ +
Sbjct: 215 QISVAQKLFVEMPEKDVISWGTIISGCVQNGELEKALDYFKELG----EQKLRPNEAILV 270
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
S+L+A A LG +++GK +H +GTALVDMY KCGC++ + +F MP+K
Sbjct: 271 SLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEK 330
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
D +W MI A +G G+EA F + +G P +VTF+G+L+AC+ +GLV +G+ F
Sbjct: 331 DKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFF 390
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+M Y +EP + HY CM+D+LSRAG +A +I MP PD +W ++LG CQ+HG
Sbjct: 391 KLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGF 450
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
+ELGE++ LI +DP ++ YV L ++A+ +++DV K R LM ER K + G S +
Sbjct: 451 IELGEEIGNKLIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNK-IAGWSLI 509
Query: 518 EVDGVVHEF 526
E +G VH F
Sbjct: 510 EAEGRVHRF 518
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/531 (36%), Positives = 306/531 (57%), Gaps = 44/531 (8%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
VSP + + I +C++MR L++IH +++ ++ L +++ FCALS
Sbjct: 48 VSPEEVLEEEERIALLIRKCRSMRVLRQIHARLLTHAMPISSISFGL-CKIIGFCALSPY 106
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGI-SPDC 137
G + YA +FS I+R +++++N MIR C S+T S + + L+++M+ G +P+
Sbjct: 107 GDIDYARKLFSQIQRPNIFSWNSMIRG--CSQSQTP---SKEPVILFRKMVRRGYPNPNT 161
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T F+LK C+ G V+ V+K G FV+ ++++ + C + A +FDE
Sbjct: 162 FTMAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDE 221
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+++ RN+ +W+++I+G+ + G EAL LF
Sbjct: 222 ITD-------------------------------RNLVAWSTMISGYARIGLVNEALGLF 250
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
++MQ + V PD++T+ SV+SACA GA+D GKWVH Y+ + ++ D+ + TALV+M
Sbjct: 251 RDMQKAGV----VPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNM 306
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCGC+ERA VF MP KDT AW++MI A+NG ++A + F ME V+PNHVTF
Sbjct: 307 YAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTF 366
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+G+LSACAHSGLV +GR + M +V P + Y CM+D+L RA L +A L+ +MP
Sbjct: 367 IGVLSACAHSGLVSEGRRYWSSMLEFGIV-PSMELYGCMVDLLCRASLVEDACTLVETMP 425
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+ P+ +W LL GC+ N++ E VAQ L++L+P N Y+ L ++YA +++ + +
Sbjct: 426 ISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQ 485
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
R MK GI K VPGCSS+EVDG+VHEF M E+ IL +SK
Sbjct: 486 VRKKMKGMGI-KAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISK 535
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 192/513 (37%), Positives = 289/513 (56%), Gaps = 54/513 (10%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
C+++R++K++H ++ L S + LLF A++V G++++A VF I R DL
Sbjct: 17 RCRSLRQIKQVHALMVLRGFLSDP---SALRELLFASAVAVRGAIAHAYLVFDQIPRPDL 73
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQML----CTGISPDCLTFPFLLKECTKRLD 152
+ YN +IR A ++ + + LY +M C G+ PD +TFPF+L+ CT
Sbjct: 74 FMYNTLIRGAAHTAAPRD------AVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGA 127
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF------------------------- 187
G GA V+ VVK G D FV+N++I + +CG
Sbjct: 128 GGTGAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMITG 187
Query: 188 ------VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ +AR LFDE +D VSWN MI Y + G++ A LF R+ +R++ SWN++I
Sbjct: 188 CARRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAMI 247
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR- 300
+G V+ G A+ELF++MQ KPD +T+ S+LSACA G ID G+ +H L
Sbjct: 248 SGHVRCGSHVYAMELFEQMQRMG----QKPDVVTMLSLLSACADSGDIDVGRRLHSSLSE 303
Query: 301 ---RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
R+G V++G AL+DMY KCG ++ A VF M KD W ++I AL+G+ E
Sbjct: 304 MFLRTGF--TVILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLE 361
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
+ D F++M E VRP+ +TFV +L AC+H G+V+KGR F +M+H Y +EP+V HY CM+
Sbjct: 362 SIDVFKKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMV 421
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L RAGL EA I +M +EP+ +W LLG C++HG +EL E + L+
Sbjct: 422 DMLGRAGLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDESG 481
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
YV L ++YA AG + + +K R LM + G+ K+
Sbjct: 482 DYVLLSNIYASAGEWSESEKMRKLMDDSGVNKQ 514
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 191/509 (37%), Positives = 297/509 (58%), Gaps = 14/509 (2%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M++ K+IH I + + + + +R+L F A S G YA +F+H+ +++ YN
Sbjct: 37 MKQTKQIHAHAIANNLTRFS---YISSRILAFFAASPRGDFRYAETLFTHMPNPNIFDYN 93
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+I +S T ++ K L ++ +ML I P+ TF L+K C L L V+
Sbjct: 94 SII------TSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVT-LSSL--EQVF 144
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+K G DV+ +SVI++F G + AR +FDE SNR+VV W +++ GY G ++
Sbjct: 145 TLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVN 204
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV-EEMVKPDKITIASV 279
D+F +M +RN S +++++G+V+ E ++LF+E++ VK + + SV
Sbjct: 205 EVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSV 264
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
L+AC +GA + GKW+H Y+ +GL+ D+ +GTAL+D Y KCG V+ A VF +M KD
Sbjct: 265 LNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDV 324
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
W+AMI A+NG K A + F +ME G +PN VTFVG+L+AC H L + F +
Sbjct: 325 ATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGI 384
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M Y + P + HY C++DIL+R+G +A I SM +EPD +WG+LL GC MHG+ E
Sbjct: 385 MSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYE 444
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LG+KV +YLI+ DP + YV L +MYA G+++ V + R LMK+RG+ V G S +E+
Sbjct: 445 LGQKVGKYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVVI-VYGWSFIEI 503
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSK 548
D +H+FS + E+ +L+ L K
Sbjct: 504 DQTLHKFSADDKCCLYSGEIYEVLSHLGK 532
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/477 (36%), Positives = 278/477 (58%), Gaps = 6/477 (1%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A F + + D+ +++ MI A +S + + +L ++M G+ P+ +TF +
Sbjct: 334 ARETFDRMSKRDVISWSAMI-AGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSI 392
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
LK C+ G ++ ++ K G D +Q ++ +++ CG + A +F +M N++V
Sbjct: 393 LKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNV 452
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
V+W +++ Y++ GDL A +F M RN+ SWN +I G+ Q G + EL M+
Sbjct: 453 VAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKV- 511
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
E +PD++TI S+L AC L A++ GK VH + GL+ D V+ T+L+ MY KCG
Sbjct: 512 ---EGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGE 568
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
V A VF ++ +DT+AW AM++ + +G G EA D F+ M E V PN +TF ++SA
Sbjct: 569 VTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISA 628
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C +GLV++GR F +M+ + ++P HY CM+D+L RAG EAE I+ MP EPD+
Sbjct: 629 CGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDIS 688
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
VW ALLG C+ H NV+L E A +++ L+P N + YV L ++YA+AGR+DD K R +M
Sbjct: 689 VWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMD 748
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIR 560
++G++K+ G SS+E+DG +H F + + + L L+K MK G+ +R
Sbjct: 749 DKGLKKD-RGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMR 804
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 139/546 (25%), Positives = 241/546 (44%), Gaps = 97/546 (17%)
Query: 7 MVSYSLLNSPAK-------VSPPNKESTKLILRNAIDECKN---MRELKEIHTQIIKSPC 56
+ +Y+ N PAK + N E ++ + + C N + + +EIHT ++K+
Sbjct: 151 IAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHT-VVKASG 209
Query: 57 LQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDT 116
++T+ + S G +S A +F +K ++ ++ +I+ANA + + N+
Sbjct: 210 METD----VAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANA-QHRKLNEA 264
Query: 117 HSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQN 176
+LY++ML GISP+ +TF LL C G ++ + + G+ DV V N
Sbjct: 265 -----FELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVAN 319
Query: 177 SVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG-----DLDVALDLFRRMKK 231
++I+++ C + AR FD MS RDV+SW+AMI GY +SG LD L RM++
Sbjct: 320 ALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRR 379
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
+F P+K+T S+L AC+ GA++
Sbjct: 380 EGVF-----------------------------------PNKVTFMSILKACSVHGALEQ 404
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA------- 344
G+ +H + + G + D + TA+ +MY KCG + A VF +M K+ +AW +
Sbjct: 405 GRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIK 464
Query: 345 ------------------------MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
MI+ +A +G + F+ M+ EG +P+ VT + +
Sbjct: 465 CGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISI 524
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYL-VEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
L AC +E+G+ V V L +E +I + S+ G +EA R +
Sbjct: 525 LEACGALSALERGK--LVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEA-RTVFDKISN 581
Query: 440 PDVFVWGALLGGCQMHG-NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
D W A+L G HG E + + L + P N + + +AG + ++
Sbjct: 582 RDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREI 641
Query: 499 RNLMKE 504
+M+E
Sbjct: 642 FRIMQE 647
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 205/437 (46%), Gaps = 51/437 (11%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G ++ VF + D+ T++ MI A A + H K +++M I P+ +
Sbjct: 127 GDVASVEQVFRRMTLRDVVTWSSMIAAYA------GNNHPAKAFDTFERMKDANIEPNRI 180
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +LK C Y + K + ++ A G T
Sbjct: 181 TFLSILKACNN----------YSMLEK---------AREIHTVVKASGMET--------- 212
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
DV A+I Y + G++ +A ++F++MK+RN+ SW +II Q + EA EL++
Sbjct: 213 ---DVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYE 269
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+M ++ + P+ +T S+L++C A++ G+ +H ++ GL+ DVV+ AL+ MY
Sbjct: 270 KM----LQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMY 325
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG-----KEAFDTFREMEAEGVRPN 373
KC C++ A F M K+D ++W+AMI+ +A +GY E F M EGV PN
Sbjct: 326 CKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPN 385
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
VTF+ +L AC+ G +E+GR + V A + ++ ++ G EAE++
Sbjct: 386 KVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTA-IFNMYAKCGSIYEAEQVF 444
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
M +V W +LL G++ EKV ++ N + + YA++G
Sbjct: 445 SKME-NKNVVAWASLLTMYIKCGDLTSAEKV---FSEMSTRNVVSWNLMIAGYAQSGDIA 500
Query: 494 DVKKTRNLMKERGIRKE 510
V + + MK G + +
Sbjct: 501 KVFELLSSMKVEGFQPD 517
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 170/345 (49%), Gaps = 43/345 (12%)
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
D+ N++I Y + GD+ +FRRM R++ +W+S+I + +A + F+ M+
Sbjct: 112 DIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMK 171
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
+++E P++IT S+L AC ++ + +H ++ SG++ DV + TAL+ MY KC
Sbjct: 172 DANIE----PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKC 227
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + A +F++M +++ ++WTA+I A + EAF+ + +M G+ PN VTFV LL
Sbjct: 228 GEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLL 287
Query: 382 SAC-----------AHSGLVEKGRWCFVMMRHVYLV-------------------EPHVY 411
++C HS + E+G V++ + + + V
Sbjct: 288 NSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVI 347
Query: 412 HYACMIDILSRAGL-----FSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEK 463
++ MI +++G E +L+ M E P+ + ++L C +HG +E G +
Sbjct: 348 SWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQ 407
Query: 464 VAQYLIDLD-PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+ + + + + + +MYAK G + ++ + M+ + +
Sbjct: 408 IHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNV 452
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 13/270 (4%)
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
+ GR +EA++L ++ + +V + T ++ CA L + GK VH L GL
Sbjct: 55 KAGRLKEAIQLLGIIKQRGL--LVNSN--TYGCIIEHCAKLRRFEDGKMVHKQLDELGLA 110
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
D+ +G +L++ Y K G V VF+ M +D + W++MI+ +A N + +AFDTF M
Sbjct: 111 IDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM 170
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
+ + PN +TF+ +L AC + ++EK R +++ + E V +I + S+ G
Sbjct: 171 KDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGM-ETDVAVATALITMYSKCGE 229
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV----ELGEKVAQYLIDLDPLNHAFYVN 481
S A + + M E +V W A++ H + EL EK+ Q I + + +N
Sbjct: 230 ISLACEIFQKMK-ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLN 288
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C+ R ++ + + ERG+ +V
Sbjct: 289 SCNTPEALNRG---RRIHSHISERGLETDV 315
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 177/431 (41%), Positives = 262/431 (60%), Gaps = 8/431 (1%)
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
ML G PD +FPF+LK C + G ++ +K GV DVFVQN++IS F +CG
Sbjct: 1 MLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGA 60
Query: 188 VTSARMLFDEMSN--RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
V +AR +FD + RDVVSWN+MI GYL+S ++AL +F R+ RN W S+I G+
Sbjct: 61 VEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYA 120
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
Q +EA+ELF+EMQ D TIA VLSAC + GA+ G+W+H Y R+ ++
Sbjct: 121 QSDLFKEAIELFREMQIGGF----AADAATIACVLSACGHWGALAQGRWIHLYCERNSIE 176
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
D+ AL+ MY KCG +++A +F + + D +W+A+IS A+NG +A F +M
Sbjct: 177 MDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQM 236
Query: 366 EA-EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
E +RPN +TF+G+L AC H G V+KG + F M +Y + P + HY CM+D+L RA
Sbjct: 237 EMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRAN 296
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
L EAE+ IR++P++PDV +W +LL C+ HGN+EL E A+ + +L+P V L +
Sbjct: 297 LLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSN 356
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
+YA A R+ DVK+ R M + I+K+ PGCS VE+DG+VHE + + +
Sbjct: 357 VYASASRWGDVKRVRKDMATQRIKKQ-PGCSFVEIDGLVHELFVADRSHPEMGAIYETMI 415
Query: 545 GLSKIMKNGGF 555
++K +++ GF
Sbjct: 416 SINKALQSKGF 426
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 167/389 (42%), Positives = 251/389 (64%), Gaps = 5/389 (1%)
Query: 168 VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFR 227
V D V +S++ L+ CG V AR +FDEM+ RDVV+WN MI GY+++GD A +LF
Sbjct: 109 VASDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFD 168
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG 287
M +RN+ SW ++I G+ Q R +A+E+F+ MQ +E D + + SVL+AC LG
Sbjct: 169 AMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEA----DGVALLSVLAACGDLG 224
Query: 288 AIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMIS 347
A+D G+WVH ++ R GL ++ + +++DMY KCGC+E+A VF+ M +K + WT +I+
Sbjct: 225 AVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIA 284
Query: 348 VFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
FAL+G G +A + F ME E + PN VTF+ +LSAC+H GL + GRW F +M Y ++
Sbjct: 285 GFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIK 344
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY 467
P V HY CM+D+L RAG EA+ L+++MP++ + +WGALL + HG+ LGE+ +
Sbjct: 345 PRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLH 404
Query: 468 LIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFS 527
LI+L+P N Y+ L +++A+ R+ DV K R M+ERG+R VPG SS+EVDG+VHEF+
Sbjct: 405 LIELEPNNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRN-VPGASSIEVDGMVHEFT 463
Query: 528 MKGSPKVVKEELVLILNGLSKIMKNGGFG 556
+ + +L + MK+ GF
Sbjct: 464 SRDWSHPFIHTICEVLCEIDTNMKSVGFA 492
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 144/324 (44%), Gaps = 57/324 (17%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLCTGISPD 136
+G ++A +F + ++ ++ +I A K E K ++++++M GI D
Sbjct: 157 AGDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPE-------KAVEVFRRMQVEGIEAD 209
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
+ +L C +G V+ VV+ G+C ++ + NS+I ++M CG + A +F+
Sbjct: 210 GVALLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFE 269
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
M + VV+W +I G+ G A+++F RM++ N+
Sbjct: 270 GMEEKSVVTWTTLIAGFALHGLGLQAVEMFCRMERENM---------------------- 307
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL-RRSGLDCDVVIGTALV 315
P+ +T ++LSAC+++G D G+W + + + V +V
Sbjct: 308 -------------APNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYGCMV 354
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLA-WTAMISVFALN---GYGKEAFDTFREMEAEGVR 371
D+ G+ GC++ A + K MP K A W A+++ + G G++A E+E
Sbjct: 355 DLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIELE----- 409
Query: 372 PNHVTFVGLLSACAHSGLVEKGRW 395
PN+ LLS E+ RW
Sbjct: 410 PNNSGNYILLSNI----FAEQERW 429
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG---YGK 356
R + D + ++LV +Y CG V A VF EM +D +AW MI+ + G + +
Sbjct: 105 RTGHVASDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHAR 164
Query: 357 EAFDT----------------------------FREMEAEGVRPNHVTFVGLLSACAHSG 388
E FD FR M+ EG+ + V + +L+AC G
Sbjct: 165 ELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLG 224
Query: 389 LVEKGRWC--FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
V+ G W FV+ R + P + +ID+ + G +A + M E V W
Sbjct: 225 AVDLGEWVHRFVVRRGLCQEIPLMN---SIIDMYMKCGCIEKAVEVFEGME-EKSVVTWT 280
Query: 447 ALLGGCQMHG 456
L+ G +HG
Sbjct: 281 TLIAGFALHG 290
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 307/547 (56%), Gaps = 58/547 (10%)
Query: 18 KVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV 77
KV +KE+ ++IL D+ ++ L ++H++I+ + L+ + +L +L+ A S
Sbjct: 32 KVEVFSKEACEVIL----DQYPGIKTLNKLHSKIVINEHLRIDP--TLAIKLMR--AYSA 83
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G S A +F ++ +N+MIR S N+ + L +++ ML +PD
Sbjct: 84 QGETSVARYIFDRSLEKNVVFFNVMIR------SYVNNNLYVEALSIFQVMLSCAFNPDH 137
Query: 138 LTFPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
TFP +LK C+ LD L VG V+ +VK G+ ++F+ N++++++ CG + AR + D
Sbjct: 138 YTFPCVLKACSG-LDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALD-------------------------------- 224
+M RDVVSWN+M+ GY +SG D AL+
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 225 -----LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
+F RM K+N+ SWN +I +V EA+ LF +M+ + KPD +TIAS+
Sbjct: 257 QYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGM----KPDAVTIASL 312
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
L AC L A+ G+ +H Y+ + L ++++ AL+DMY KCGC+E A VF +M +D
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDV 372
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++WT+M+S + +G G +A F +M G P+ + FV +LSAC+H+GL+++GR F M
Sbjct: 373 VSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRM 432
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M Y + P + H+ACM+D+ RAG EA I+ MPMEP+ VWGALL C++H ++
Sbjct: 433 MTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMD 492
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
+G A L L P +YV L ++YAKAG + DV R MK+ GI+K VPG S+VE+
Sbjct: 493 IGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKK-VPGISNVEL 551
Query: 520 DGVVHEF 526
+G VH F
Sbjct: 552 NGQVHTF 558
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 204/567 (35%), Positives = 318/567 (56%), Gaps = 57/567 (10%)
Query: 5 LQMVSYSL--LNSPAKVSPPNK---ESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQT 59
LQ VS+SL LN+ A PN E + + I +C ++RELK+I IK+
Sbjct: 7 LQCVSHSLTKLNTEAPRHEPNTAALEPPSSSILSLIPKCTSLRELKQIQAYTIKT----H 62
Query: 60 NDHHSLITRLLFFCALSVS-GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHS 118
++ +++T+L+ FC + + S+ +A +F I + D+ +N M R A +D
Sbjct: 63 QNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYA----RFDD--P 116
Query: 119 GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV-GASVYGQVVKFGVCDDVFVQNS 177
+ + L Q+LC+G+ PD TF LLK C RL L G ++ VK GV D+++V +
Sbjct: 117 LRAILLCSQVLCSGLLPDDYTFSSLLKACA-RLKALEEGKQLHCLAVKLGVGDNMYVCPT 175
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
+I+++ AC D+D A +F ++ + + ++
Sbjct: 176 LINMYTACN-------------------------------DVDAARRVFDKIGEPCVVAY 204
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N+IIT + R EAL LF+E+Q S + KP +T+ LS+CA LGA+D G+W+H
Sbjct: 205 NAIITSCARNSRPNEALALFRELQESGL----KPTDVTMLVALSSCALLGALDLGRWIHE 260
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
Y++++G D V + TAL+DMY KCG ++ A VFK+MP++DT AW+AMI +A +G+G +
Sbjct: 261 YVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQ 320
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
A REM+ V+P+ +TF+G+L AC+H+GLVE+G F M H Y + P + HY CMI
Sbjct: 321 AISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMI 380
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L RAG EA + I +P++P +W LL C HGNVE+ + V Q + +LD +
Sbjct: 381 DLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGG 440
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKE 537
YV L ++ A+ GR+DDV R +M ++G K VPGCSS+EV+ VVHEF S V
Sbjct: 441 DYVILSNLCARNGRWDDVNHLRKMMVDKGALK-VPGCSSIEVNNVVHEFF---SGDGVHS 496
Query: 538 ELVLILNGLSKIMKNGGFGQYIRGLSM 564
++ + L +++K Y+ S+
Sbjct: 497 TSTILHHALDELVKELKLAGYVPDTSL 523
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 252/411 (61%), Gaps = 10/411 (2%)
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKE--CTKRLDG--LVGASVYGQVVKFGVCDDVFVQN 176
L LY +L G+ P T P LLK + + G ++ +V+ VK G+ V V N
Sbjct: 56 ALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVHTHAVKLGLDRFVLVSN 115
Query: 177 SVISLFMA-CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
++I + G + +L + D ++N +I Y R+G L A LF M RN
Sbjct: 116 ALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAV 175
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SW++++ G+VQ G REAL +F MQ+ E V+PD + VL+ACA GA++ GKWV
Sbjct: 176 SWSAMVNGYVQAGDGREALRIFARMQA----EDVRPDDTVLVGVLAACAQHGALEQGKWV 231
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
HGYL+ G+ ++ GTALVDMY KCG V+ A VF+ M K+ LAWT MI A++G G
Sbjct: 232 HGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRG 291
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
EA F +ME+ G+RP+ + F+G+L AC H+GLV+KGR F M Y ++P + HY C
Sbjct: 292 SEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGC 351
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
M+D+L+R G EA+ +I+ MPMEPD +WGAL+ GC+ H NVE E VA++ I L+P
Sbjct: 352 MVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDK 411
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L ++YA +GR ++ R+LM+E+G+ K PGCS+VEV+GV+H+F
Sbjct: 412 SGAYVLLSNIYAASGRHASAREIRHLMREKGVDK-TPGCSTVEVNGVIHQF 461
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 119/279 (42%), Gaps = 43/279 (15%)
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
A + +G L+ A +F + + +++ M+ + D + L+++ +M
Sbjct: 149 LITAYARAGRLADARALFDEMPARNAVSWSAMVNGYV----QAGDGR--EALRIFARMQA 202
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
+ PD +L C + G V+G + G+ ++F +++ ++ CG V
Sbjct: 203 EDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQL 262
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
A +F+ M ++V++W M I G GR
Sbjct: 263 AMDVFERMQYKNVLAWTTM-------------------------------IKGLAMHGRG 291
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV-HGYLRRSGLDCDVV 309
EA+ LF +M+SS ++PD I VL AC + G +D G+ + +R+ G+ +
Sbjct: 292 SEAVMLFAQMESSG----IRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIE 347
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMIS 347
+VD+ + G + A + ++MP + D L W A+++
Sbjct: 348 HYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMA 386
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 307/547 (56%), Gaps = 58/547 (10%)
Query: 18 KVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV 77
KV +KE+ ++IL D+ ++ L ++H++I+ + L+ + +L +L+ A S
Sbjct: 32 KVEVFSKEACEVIL----DQYPGIKTLNKLHSKIVINEHLRIDP--TLAIKLMR--AYSA 83
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G S A +F ++ +N+MIR S N+ + L +++ ML +PD
Sbjct: 84 QGETSVARYIFDRSLEKNVVFFNVMIR------SYVNNNLYVEALSIFQVMLSCAFNPDH 137
Query: 138 LTFPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
TFP +LK C+ LD L VG V+ +VK G+ ++F+ N++++++ CG + AR + D
Sbjct: 138 YTFPCVLKACSG-LDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALD-------------------------------- 224
+M RDVVSWN+M+ GY +SG D AL+
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 225 -----LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
+F RM K+N+ SWN +I +V EA+ LF +M+ + KPD +TIAS+
Sbjct: 257 QYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGM----KPDAVTIASL 312
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
L AC L A+ G+ +H Y+ + L ++++ AL+DMY KCGC+E A VF +M +D
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDV 372
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++WT+M+S + +G G +A F +M G P+ + FV +LSAC+H+GL+++GR F M
Sbjct: 373 VSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRM 432
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M Y + P + H+ACM+D+ RAG EA I+ MPMEP+ VWGALL C++H ++
Sbjct: 433 MTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMD 492
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
+G A L L P +YV L ++YAKAG + DV R MK+ GI+K VPG S+VE+
Sbjct: 493 IGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKK-VPGISNVEL 551
Query: 520 DGVVHEF 526
+G VH F
Sbjct: 552 NGQVHTF 558
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 186/488 (38%), Positives = 277/488 (56%), Gaps = 22/488 (4%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHS-LITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
M +LK+IH +++ DH LI +LL L YA +F I + +Y Y
Sbjct: 1 MNQLKQIHAYSLRNGL----DHTKFLIEKLLQL------PDLPYACTLFDQIPKPSVYLY 50
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
N I+ + ++ H +C LY QM G SP+ +F FL C + G +
Sbjct: 51 NKFIQ------TFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQML 104
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ K G D+F +++ ++ G + SAR LFDEM RD+ +WN++I GY RSG +
Sbjct: 105 HSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHM 164
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
+ AL+LF +M RN+ SW ++I+G+ Q G+ +ALE+F +++ E+ KP++++IASV
Sbjct: 165 EAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLEN---EKGTKPNEVSIASV 221
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
L AC+ LGA+D GK + Y R +G + + A+++++ +CG +E A VF E+ K
Sbjct: 222 LPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRN 281
Query: 340 L-AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
L +W MI A++G +A + +M +RP+ VTFVGLL AC H G+V +GR F
Sbjct: 282 LCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFE 341
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
M + V P + HY C++D+L RAG EA LI++MPM PD +WG LLG C HGNV
Sbjct: 342 SMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNV 401
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
ELGE A+ L L+P N YV L ++YA AG + V + R +MK I K G S +E
Sbjct: 402 ELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRA-GYSYIE 460
Query: 519 VDGVVHEF 526
V +HEF
Sbjct: 461 VGDGIHEF 468
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 198/531 (37%), Positives = 301/531 (56%), Gaps = 24/531 (4%)
Query: 28 KLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL-SYATN 86
K L +C + +LK++H I++ + ND + LL A S S SYA +
Sbjct: 5 KGFLTTVAQKCNTLTQLKQLHAHILRC---RINDTPYALAPLLSVLATSNDASFFSYARS 61
Query: 87 VFSHIKRSDLYTYNIMIRAN-ACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
+F H+ + + +N MIR C+S H+ C Y ML G++ + TFP L+K
Sbjct: 62 IFRHLTNRNTFMHNTMIRGYLQCRSP----LHAVSC---YLSMLQNGVAVNNYTFPPLIK 114
Query: 146 ECTKRL----DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
C L +VG V+G VVKFG+ +D +V ++ I + V +AR+LFDE S +
Sbjct: 115 ACIALLPSSPSNIVGRLVHGHVVKFGLRNDPYVVSAFIEFYSVSREVDTARVLFDETSYK 174
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
DVV AM+ GY + G++ A ++F +M +RN SW++++ + + +E L LF EMQ
Sbjct: 175 DVVLGTAMVDGYGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSRVSDFKEVLALFTEMQ 234
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
+ E P++ + +VL+ACA+LGA+ G WVH Y RR L+ + ++ TALVDMY KC
Sbjct: 235 NEGTE----PNESILVTVLTACAHLGALTQGLWVHSYARRFHLESNPILATALVDMYSKC 290
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
GCVE A VF + KD AW AMIS ALNG ++ FR+M A +PN TFV +L
Sbjct: 291 GCVESALSVFDCIVDKDAGAWNAMISGEALNGDAGKSLQLFRQMAASRTKPNETTFVAVL 350
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP---M 438
+AC H+ +V++G W F M VY V P + HYAC+ID+LSRAG+ EAE+ +
Sbjct: 351 TACTHAKMVQQGLWLFEEMSSVYGVVPRMEHYACVIDLLSRAGMVEEAEKFMEEKMGGLT 410
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
D VWGALL C++H N+ +G +V + L+D+ + +V ++Y +AG + K
Sbjct: 411 AGDANVWGALLNACRIHKNIHVGNRVWKKLVDMGVTDCGTHVLTYNIYREAGWDVEANKV 470
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
R+ ++E G++K+ PGCS +EVD V EF +E+ +L+ + K+
Sbjct: 471 RSRIEEVGMKKK-PGCSIIEVDNEVEEFLAGDHSHPQAQEMCKLLDSILKM 520
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 180/494 (36%), Positives = 289/494 (58%), Gaps = 20/494 (4%)
Query: 30 ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
IL + + C++M LK+IH S ++H ++ ++L F A+S SG L YA +F
Sbjct: 18 ILASIAENCQSMNHLKQIHAH---SLLTDLHNHSVILGKMLRFAAVSPSGDLPYAQRLFD 74
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
+ + + + YN +IR A SS + C+ L+ QM + PD TF FL+K ++
Sbjct: 75 QMPQPNTFFYNTIIRGYAKSSSPS------YCVNLFNQMRQNHVDPDEFTFNFLIKARSR 128
Query: 150 R------LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
L ++G V K+G C +FVQN++I+L+ G +A +F+E DV
Sbjct: 129 VHKVHNFPSTLECDEIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETVGVDV 188
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
VSW+ +++ ++R G+L++A +F M ++++ SW ++++G+ + +REALELF EM +
Sbjct: 189 VSWSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDA 248
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
+ +PD++TI SV+SAC LG ++ G VH Y+ +G V + AL++MY KCGC
Sbjct: 249 GI----RPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGC 304
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
V+RA+ VF M +K + W +MIS A +GY ++AF+ F M G+ P+ +TF+ LL A
Sbjct: 305 VDRAWRVFNNMKRKSLITWNSMISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIA 364
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
H GLV++G F +M Y +E + HY C++D+L RAG EA LI +MP+ +
Sbjct: 365 YTHKGLVDEGYRLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDI 424
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
VWGALL C+++G+V +GE+V + L++L P +Y+ L D+Y +GR + R M+
Sbjct: 425 VWGALLAACRIYGDVNMGERVVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQ 484
Query: 504 ERGIRKEVPGCSSV 517
E G K PG S V
Sbjct: 485 ESGAMKN-PGYSWV 497
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 175/380 (46%), Positives = 248/380 (65%), Gaps = 6/380 (1%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM-KKRNI 234
NS+I+ + G + SAR++FD +DVVSWNA+I GY +S L A +LF M RN
Sbjct: 111 NSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNS 170
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
+WN++I+ +VQ G A+ +FQ+MQS E VKP ++T+ S+LSACA+LGA+D G+W
Sbjct: 171 VTWNTMISAYVQCGEFGTAISMFQQMQS----ENVKPTEVTMVSLLSACAHLGALDMGEW 226
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
+HGY+R L DVV+G AL+DMY KCG +E A VF + +K+ W ++I +NG
Sbjct: 227 IHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGR 286
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
G+EA F ME EG++P+ VTFVG+LS C+HSGL+ G+ F M VY +EP V HY
Sbjct: 287 GEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYG 346
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
CM+D+L RAG EA LIR+MPM+P+ V G+LL CQ+H + +LGE+V Q L++LDP
Sbjct: 347 CMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPC 406
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKV 534
+ YV L ++YA R+DDV R LM +RG+ K PGCSS+EV+ +VHEF +
Sbjct: 407 DGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHK-TPGCSSIEVNNIVHEFVAGDTSHP 465
Query: 535 VKEELVLILNGLSKIMKNGG 554
++ L+ ++K +K G
Sbjct: 466 QFTQINAFLDEIAKELKGQG 485
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 45/298 (15%)
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETN------DTHSGKCLKLYKQ 127
ALS G + A N+F ++ + ++N MI CK + N D + K + +
Sbjct: 85 ALSKHGYVEEARNLFDNMTERNSCSWNSMITC-YCKLGDINSARLMFDCNPVKDVVSWNA 143
Query: 128 ML---CTGISPDCLTFPFLLKECTKR-LDGLVGASVYGQVVKFGVCDDVFVQN------- 176
++ C FLL + + S Y Q +FG +F Q
Sbjct: 144 IIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKP 203
Query: 177 ---SVISLFMAC-------------GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+++SL AC G++ + R+ DVV NA+I Y + G L+
Sbjct: 204 TEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKI------DVVLGNALIDMYCKCGALE 257
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A+D+F + ++NIF WNSII G GR EA+ F M+ +E +KPD +T +L
Sbjct: 258 AAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVME----KEGIKPDGVTFVGIL 313
Query: 281 SACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
S C++ G + G ++ L GL+ V +VD+ G+ G ++ A + + MP K
Sbjct: 314 SGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 371
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 110/261 (42%), Gaps = 45/261 (17%)
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
V P K + + +L +CA G G+ H + + G + D+++ T L+D Y K G ++ A
Sbjct: 6 VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF MP++D +A AMIS + +GY +EA + F M N ++ +++ G
Sbjct: 66 RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMITCYCKLG 121
Query: 389 LVEKGRWCF------------------------VMMRHVYLVEPHVYH---YACMIDILS 421
+ R F V + ++L+ + + MI
Sbjct: 122 DINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYV 181
Query: 422 RAGLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYL------IDLD 472
+ G F A + + M E P +LL C G +++GE + Y+ ID+
Sbjct: 182 QCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDV- 240
Query: 473 PLNHAFYVNLCDMYAKAGRFD 493
L +A L DMY K G +
Sbjct: 241 VLGNA----LIDMYCKCGALE 257
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 307/533 (57%), Gaps = 26/533 (4%)
Query: 33 NAIDECKNMRELK---EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
+A+ C + +L +IH I KS L S + + C G ++ A F
Sbjct: 156 SALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKC-----GVVACAQRAFD 210
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
+ ++ ++N +I + + +GK L+++ M+ G+ PD +T ++ C
Sbjct: 211 GMAVRNIVSWNSLI------TCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACAS 264
Query: 150 RLDGLVGASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
G ++ +VVK +D+ + N+++ ++ C V AR++FD M R+VVS +
Sbjct: 265 WSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETS 324
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
M+ GY R+ + A +F M ++N+ SWN++I G+ Q G EA+ LF ++ S+
Sbjct: 325 MVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESI--- 381
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVH------GYLRRSGLDCDVVIGTALVDMYGKCG 322
P T ++L+ACA L + G+ H G+ +SG + D+ +G +L+DMY KCG
Sbjct: 382 -WPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCG 440
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
VE VF+ M ++D ++W AMI +A NGYG A + FR+M G +P+HVT +G+LS
Sbjct: 441 MVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLS 500
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
AC+H+GLVE+GR F MR + P H+ CM+D+L RAG EA LI++MPM+PD
Sbjct: 501 ACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDN 560
Query: 443 FVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
VWG+LL C++HGN+ELG+ VA+ L+++DPLN YV L +MYA+ GR+ DV + R M
Sbjct: 561 VVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQM 620
Query: 503 KERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++RG+ K+ PGCS +E+ VH F +K +K+++ L+L L++ MK G+
Sbjct: 621 RQRGVIKQ-PGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGY 672
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 176/369 (47%), Gaps = 46/369 (12%)
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D F LL C + G+ ++ +++K ++F+QN ++ + CG+ AR +F
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D M R+ S+NA++ + G LD A ++F+ M + + SWN++++GF Q R EAL
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
F +M S E+ V ++ + S LSACA L ++ G +H + +S DV +G+ALV
Sbjct: 138 FFVDMHS---EDFV-LNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALV 193
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DMY KCG V A F M ++ ++W ++I+ + NG +A + F M GV P+ +
Sbjct: 194 DMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEI 253
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY-----ACMIDILSRAGLFSEAE 430
T ++SACA + +G + H +V+ Y ++D+ ++ +EA
Sbjct: 254 TLASVVSACASWSAIREG-----LQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEAR 308
Query: 431 RLIRSMP------------------------------MEPDVFVWGALLGGCQMHGNVEL 460
+ MP ME +V W AL+ G +G E
Sbjct: 309 LVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENE- 367
Query: 461 GEKVAQYLI 469
E V +L+
Sbjct: 368 -EAVRLFLL 375
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 119/315 (37%), Gaps = 70/315 (22%)
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
V E+ D A +L +C + + +H + ++ ++ I LVD YGKCG
Sbjct: 11 VGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYF 70
Query: 325 E-------------------------------RAYGVFKEMPKKDTLAWTAMISVFALNG 353
E A+ VFK MP+ D +W AM+S FA +
Sbjct: 71 EDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHD 130
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-RHVYLVEPHVYH 412
+EA F +M +E N +F LSACA + G ++ + YL++ VY
Sbjct: 131 RFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLD--VYM 188
Query: 413 YACMIDILSRAGLFSEAERLIRSMP----------------------------------M 438
+ ++D+ S+ G+ + A+R M +
Sbjct: 189 GSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGV 248
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN--LCDMYAKAGRFDDVK 496
EPD +++ C + G ++ ++ D + + L DMYAK R ++ +
Sbjct: 249 EPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEAR 308
Query: 497 KTRNLMKERGIRKEV 511
+ M R + E
Sbjct: 309 LVFDRMPLRNVVSET 323
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 190/512 (37%), Positives = 292/512 (57%), Gaps = 19/512 (3%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
MR++K+IH +++ QT LI +LL +L YA V H + L+ YN
Sbjct: 1 MRQVKQIHGYTLRNGIDQTK---ILIEKLLEI------PNLHYAHKVLHHSPKPTLFLYN 51
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+I+A + ++ H +C LY QML P+ TF FL CT +G ++
Sbjct: 52 KLIQAYS-----SHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLH 106
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+K G D+F +++ ++ G + AR LFD+M R V +WNAM+ G+ R GD+D
Sbjct: 107 THFIKSGFEPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMD 166
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
VAL+LFR M RN+ SW ++I+G+ + + EAL LF M+ E+ + P+ +T+AS+
Sbjct: 167 VALELFRLMPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQ---EKGMMPNAVTLASIF 223
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK-KDT 339
A A LGA++ G+ V Y R++G ++ + A+++MY KCG ++ A+ VF E+ ++
Sbjct: 224 PAFANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNL 283
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+W +MI A++G + + +M EG P+ VTFVGLL AC H G+VEKGR F
Sbjct: 284 CSWNSMIMGLAVHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKS 343
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + + P + HY CM+D+L RAG EA +I+ MPM+PD +WGALLG C H NVE
Sbjct: 344 MTTSFNIIPKLEHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVE 403
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
L E A+ L L+P N YV L ++YA AG++D V K R +MK I K G S +E
Sbjct: 404 LAEIAAESLFALEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSA-GHSFIEE 462
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
G +H+F ++ E+ +L+G+ +++K
Sbjct: 463 GGQLHKFIVEDRSHPESNEIFALLDGVYEMIK 494
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 295/523 (56%), Gaps = 35/523 (6%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C + R+L +H ++ L + L T+++ C + G +++AT VFS ++ +L+
Sbjct: 23 CASFRDLLRVHAHAVR---LSLSQSSYLATQIVHLC--NAHGRVAHATRVFSQVREPNLH 77
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQML---------CTGISPDCLTFPFLLKECT 148
+N MI+A A N H + +Y +ML CTG D T+PFLLK C
Sbjct: 78 LHNAMIKAYA-----QNHRHL-DAITVYIRMLRRRPFPWISCTG--GDRFTYPFLLKACG 129
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+ +G V+G VV+ G + VQNS+I ++ G + AR +FD M RDVVSWN
Sbjct: 130 GLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNT 189
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+I + R G + A +F M + + SW ++++G+ G A+E F+ MQ E
Sbjct: 190 VISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFE-- 247
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
PD ++I +VL ACA LGA++ G+W++ Y R + + + ALV+MY KCGC+++A
Sbjct: 248 --PDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQAL 305
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHS 387
+F M +KD ++W+ M+ A +G +EA F EME +G V+PN +TFVGLLSAC+H+
Sbjct: 306 QLFNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHA 365
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GL+++G F M VY +EP V HY C++D+L R+G LI MP+ D +WG+
Sbjct: 366 GLLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGS 425
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+L C+ HG+V+ A+ L+ L+P + V L ++YA A R+ +V TR ++ R +
Sbjct: 426 VLNACRSHGDVDTAVLAAERLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSM 485
Query: 508 RKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
RK PGCS +EVD VV EF V E+L GLS ++
Sbjct: 486 RK-TPGCSLIEVDNVVQEF-------VAGEDLKPEFGGLSGVL 520
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 266/448 (59%), Gaps = 16/448 (3%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A V S + R ++ +IRA+A L LY ++ G+ P T P L
Sbjct: 41 AALVTSGLLRRSAELHDALIRAHASSGRPQ------AALPLYAHLIRAGLFPTPHTLPSL 94
Query: 144 LKEC--TKRLDGL--VGASVYGQVVKFGVCDDVFVQNSVISLFMAC-GFVTSARMLFDEM 198
LK + + G + +V+ V+ G+ + V N++I + G + A +L
Sbjct: 95 LKSLALSPAVPGARRLALAVHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTS 154
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+ D ++N +I + R+G + A LF M +RN SW++++ G+VQ G REAL +F
Sbjct: 155 AAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFS 214
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+MQ+ V +PD + VL+ACA LGA++ GKWVHGYL+ + + V +GTALVDMY
Sbjct: 215 QMQAQGV----RPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMY 270
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG V+ VF+ M K+ LAWT MI A++G G ++ F +ME+ GV+P+ + F+
Sbjct: 271 AKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFI 330
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G L AC H+GLV+KGR F M + Y ++P + HY CM+D+L+R GL SEA ++ MPM
Sbjct: 331 GALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPM 390
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+PD +WGAL+ GC+ H NVEL E V ++ I+L+P YV L ++Y+ +GR ++
Sbjct: 391 KPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREI 450
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF 526
RNLM+E+G+ K PGCS+VE+ GV+H+F
Sbjct: 451 RNLMREKGVEK-TPGCSNVEIKGVIHQF 477
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/480 (40%), Positives = 276/480 (57%), Gaps = 8/480 (1%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SG L A VF I YN +IRA + L+ Y +M G+ D
Sbjct: 125 SGDLDSAVVVFDRIDNPSSLLYNSIIRA---YTRHGXXXXXXXXLEAYARMHFLGLLGDN 181
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T PF+LK C +G V+GQ ++ G+ D +V S+I +++ CG + AR LFD+
Sbjct: 182 FTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDK 241
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M RD+ SWNA+I GY++ G++ VA DLF RM+ RNI SW ++I+G+ Q G A +AL LF
Sbjct: 242 MIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLF 301
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
EM E +KP+ +TI SVL ACA A++ G+ +H + GL + + TAL M
Sbjct: 302 DEMLQDGSE--MKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGM 359
Query: 318 YGKCGCVERAYGVFKEMPK--KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
Y KC + A F + + K+ +AW MI+ +A +G G EA F M GV+P+ V
Sbjct: 360 YAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAV 419
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
TF+GLLS C+HSGL++ G F M ++ VEP V HYAC++D+L RAG EA+ LI
Sbjct: 420 TFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQ 479
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MPM+ VWGALL C+ H N+E+ E A+ L L+P N YV L ++YA+AG +++V
Sbjct: 480 MPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEV 539
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
KK R L+K +G++K PGCS +E++G H F +E+ L L + +K G+
Sbjct: 540 KKLRALLKYQGMKKS-PGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGY 598
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 71/276 (25%)
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G + Q+V G+ + F+ +++++ + G + SA ++FD + N + +N++I Y
Sbjct: 95 LGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYT 154
Query: 215 RSG---DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
R G L+ + RM +
Sbjct: 155 RHGXXXXXXXXLEAYARMHFLGLLG----------------------------------- 179
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV------- 324
D T+ VL +CA L + G+ VHG R GL+ D +G +L+DMY KCG +
Sbjct: 180 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 239
Query: 325 --------------------ERAYGV----FKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
E GV F+ M ++ ++WTAMIS + NG+ ++A
Sbjct: 240 DKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALG 299
Query: 361 TFREMEAEG--VRPNHVTFVGLLSACAHSGLVEKGR 394
F EM +G ++PN VT V +L ACA S +E+GR
Sbjct: 300 LFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGR 335
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/490 (37%), Positives = 285/490 (58%), Gaps = 24/490 (4%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A F I+ D++ +NIM+ S T+ K L ++++M+ G+ P+ +
Sbjct: 160 GRMDIARRFFEEIEFKDVFMWNIMV------SGYTSKGEFKKALNVFRKMVLEGVKPNSI 213
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCD-DVFVQNSVISLFMACGFVTSARMLFDE 197
T + CT G ++G +K D D+ V NS++ + C V AR F
Sbjct: 214 TIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGM 273
Query: 198 MSNRDVVSWNAM--IIGYLRSGDLDVALDLFRRM----------KKRNIFSWNSIITGFV 245
+ D+VSWNAM + G+ + GD AL+ F+RM R++ WNSII+
Sbjct: 274 IKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACA 333
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
Q GR+ AL+L +EM S+VE + +T+ S L AC+ L A+ GK +H ++ R GLD
Sbjct: 334 QSGRSVNALDLLREMNLSNVE----VNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 389
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
I +L+DMYG+CG ++++ +F MP++D ++W MISV+ ++G+G +A + F++
Sbjct: 390 TCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQF 449
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
G++PNH+TF LLSAC+HSGL+E+G F MM+ Y ++P V YACM+D+LSRAG
Sbjct: 450 RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQ 509
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDM 485
F+E I MP EP+ VWG+LLG C++H N +L E A+YL +L+P + YV + ++
Sbjct: 510 FNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANI 569
Query: 486 YAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNG 545
Y+ AGR++D K R LMKERG+ K PGCS +EV +H F + + + E++ +
Sbjct: 570 YSAAGRWEDAAKIRCLMKERGVTKP-PGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMES 628
Query: 546 LSKIMKNGGF 555
L +K G+
Sbjct: 629 LYFDIKEIGY 638
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 134/535 (25%), Positives = 232/535 (43%), Gaps = 108/535 (20%)
Query: 23 NKESTKLILRNAIDECKNMRELK---EIHTQIIKSPCLQTNDHHSLITRLL-FFCALSVS 78
N + I + + +C+ + L+ ++H Q++ + + L +RLL +C +
Sbjct: 5 NPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNG---VDVCEFLGSRLLEVYCQ---T 58
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F + +++++ ++ C + +T +KL+ M+ G+ PD
Sbjct: 59 GCVEDARRMFDKMSERNVFSWTAIMEM-YCGLGDYEET-----IKLFYLMVNEGVRPDHF 112
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
FP + K C++ + VG VY ++ G + V+ S++ +F+ CG + AR F+E+
Sbjct: 113 VFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 172
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+DV WN M+ GY G+ AL++FR+M
Sbjct: 173 EFKDVFMWNIMVSGYTSKGEFKKALNVFRKM----------------------------- 203
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY-LRRSGLDCDVVIGTALVDM 317
V E VKP+ ITIAS +SAC L + HG+ +HGY ++ LD D+++G +LVD
Sbjct: 204 ------VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDY 257
Query: 318 YGKCGCVERA--------------------------YG-----------------VFKEM 334
Y KC VE A YG VF E+
Sbjct: 258 YAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSEL 317
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
+D + W ++IS A +G A D REM V N VT V L AC+ + +G+
Sbjct: 318 STRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGK 377
Query: 395 WCFVMMRHVYLVEPHV----YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
H +++ + + +ID+ R G ++ R+ MP + D+ W ++
Sbjct: 378 EI-----HQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMIS 431
Query: 451 GCQMHG-NVELGEKVAQY-LIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
MHG ++ Q+ + L P NH + NL + +G ++ K +MK
Sbjct: 432 VYGMHGFGMDAVNLFQQFRTMGLKP-NHITFTNLLSACSHSGLIEEGWKYFKMMK 485
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/433 (41%), Positives = 259/433 (59%), Gaps = 16/433 (3%)
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKEC--TKRLDGLVG 156
+N +IRA A L LY +L G P T P LLK + + G G
Sbjct: 174 HNALIRALA------GSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARG 227
Query: 157 AS--VYGQVVKFGVCDDVFVQNSVISLFMAC-GFVTSARMLFDEMSNRDVVSWNAMIIGY 213
+ V+ VK G+ + V N++I + G ++ A +L ++ D ++N +I Y
Sbjct: 228 LALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAY 287
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
R+G + A LF M RN SW++++ G+VQ G REAL LF MQ+ V +PD
Sbjct: 288 ARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGV----RPDD 343
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+ VL+ACA LG ++ GKWVHGYL+ + + V +GTALVDMY KCG ++ A VFK
Sbjct: 344 TVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKV 403
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M +K+ LAWT MI A++G G EA + F +ME GV+P+ + F+G L AC H+GLV+KG
Sbjct: 404 MKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKG 463
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R F M Y ++P + HY CM+D+L+R GL +EA ++ MPM+PD +WGAL+ GC+
Sbjct: 464 RELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCR 523
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
H NVEL E V ++ I+L+P YV L ++YA +GR ++ R+LM+E+G+ K PG
Sbjct: 524 FHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDK-TPG 582
Query: 514 CSSVEVDGVVHEF 526
CS+VE+ GV+H+F
Sbjct: 583 CSTVEIKGVIHQF 595
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/500 (36%), Positives = 293/500 (58%), Gaps = 26/500 (5%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C +E++++H +K+ +H + +RLL + L YA ++F I+R L
Sbjct: 26 CSAPQEVEQLHAFSLKTAIF---NHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLI 82
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
+N +I+ E +H G + L+ +++ + PD T P ++K C + G
Sbjct: 83 HWNTIIKCYV----ENQFSHDG--IVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGK 135
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV-----------SW 206
++G +K G DVFVQ S+++++ CG + AR +FD M ++DVV SW
Sbjct: 136 QIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSW 195
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
NAMI GY++SGD D AL+LF +M ++ +WN +I G+ G+ +A+++F M ++
Sbjct: 196 NAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMM----LK 251
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+P T+ SVLSA + L + G+W+H Y+ ++G + D ++GT+L++MY KCGC+E
Sbjct: 252 LGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIES 311
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A VF+ + KK WTA+I ++G A F EM G++PN + F+G+L+AC H
Sbjct: 312 ALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNH 371
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+GLV+ GR F MM + Y +EP + HY C++DIL RAG EA+ I +MP+ P+ +W
Sbjct: 372 AGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWM 431
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
+LLGG + HG +++GE AQ +I++ P Y+ L +MYA +G ++ V R +M +RG
Sbjct: 432 SLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRG 491
Query: 507 IRKEVPGCSSVEVDGVVHEF 526
RK+ PGCSSVE G +HEF
Sbjct: 492 FRKD-PGCSSVEHKGTLHEF 510
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 299/522 (57%), Gaps = 46/522 (8%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS-LSYATNVFSHIKR 93
+ +C ++ ELK+I IK+ LQ++ S++T+L+ FC L+ + S + +A ++F I
Sbjct: 36 LSKCTSLNELKQIQAYTIKTN-LQSDI--SVLTKLINFCTLNPTTSYMDHAHHLFDQILD 92
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
D+ +NIM R A +S L+ ++LC+G+ PD TF LLK C
Sbjct: 93 KDIILFNIMARGYARSNSPY------LAFSLFGELLCSGLLPDDYTFSSLLKACASSKAL 146
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G ++ VK G+ ++++ ++I+++ C + +AR +FD
Sbjct: 147 REGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFD----------------- 189
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
M++ I S+N+IITG+ + + EAL LF+E+Q+S++E P
Sbjct: 190 --------------EMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIE----PTD 231
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+T+ SV+ +CA LGA+D GKW+H Y+++ G D V + TAL+DM+ KCG + A +F+
Sbjct: 232 VTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEG 291
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M +DT AW+AMI FA +G G +A F EM+ EGVRP+ +TF+GLL AC+H+GLVE+G
Sbjct: 292 MRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQG 351
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R F M Y + P + HY CM+D+L RAG EA + + ++ +W LL C
Sbjct: 352 RGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACS 411
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
HGNVE+ ++V + + +LD + YV L ++YA+ GR++DV R LMK+RG+ K VPG
Sbjct: 412 THGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVK-VPG 470
Query: 514 CSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
CSSVEV+ VVHEF V EL L+ L K +K G+
Sbjct: 471 CSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGY 512
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 283/515 (54%), Gaps = 65/515 (12%)
Query: 15 SPAKVSPPNK---ESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF 71
+P +P ++ ES + + C NM EL++IH Q++K+ + S +LL
Sbjct: 2 APILCTPTSQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPAS---KLLA 58
Query: 72 FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
FCA SGSL+YA VF I R + + +N MIR +N + L LY ML
Sbjct: 59 FCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGY------SNSKEPEEALLLYHHMLYH 112
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
+ + TFPFLLK C+ ++ ++K G +++ NS++++
Sbjct: 113 SVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNV---------- 162
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
Y +SGD+ A LF ++ +R+
Sbjct: 163 ---------------------YSKSGDIKSARLLFDQVDQRDT----------------- 184
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EAL LF MQ++ + K D + + S L ACA LG +D GKW+H Y+++ ++ D ++G
Sbjct: 185 EALNLFHRMQTAGI----KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG 240
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
L+DMY KCG +E A VF++M +K WTAMIS +A++G G+EA + F +M+ GV
Sbjct: 241 CVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVE 300
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
PN +TF G+L+AC+H+GLV + + F M ++ +P + HY CM+D+L RAGL EAE
Sbjct: 301 PNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEE 360
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
LI +MP++P+ +WGALL C +HGN+ELG+++ + LI +DP + Y++L ++A AG
Sbjct: 361 LIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGE 420
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++ + R MKE+G+ K +PGCS + V+G HEF
Sbjct: 421 WNQAARVRRQMKEQGVSK-LPGCSVISVNGTAHEF 454
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 271/445 (60%), Gaps = 12/445 (2%)
Query: 118 SGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQN 176
+GK L+++ +M+ GI PD +T + C G ++ +V+K +D+ + N
Sbjct: 233 AGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGN 292
Query: 177 SVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFS 236
+++ ++ C V AR++FD M RDVVS +M+ GY ++ + A +F M +RN+ S
Sbjct: 293 ALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVS 352
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
WN++I G+ Q G EA+ LF ++ S+ P T ++L+ACA L + G+ H
Sbjct: 353 WNALIAGYTQNGENEEAVRLFLLLKRESI----WPTHYTFGNLLNACANLADLKLGRQAH 408
Query: 297 ------GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G+ +SG D D+ +G +L+DMY KCG VE VF+ M ++D ++W AMI +A
Sbjct: 409 THILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYA 468
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
NGYG EA + FREM G RP+HVT +G+LSAC+H+GLVE+GR F M + + P
Sbjct: 469 QNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVK 528
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+D+L RAG EA LI++MPMEPD VWG+LL C++HGN+ LG+ VA+ L++
Sbjct: 529 DHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLE 588
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
+DPLN YV L +MYA+ GR+ DV + R M++ G+ K+ PGCS + + +H F +K
Sbjct: 589 IDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQ-PGCSWISIQSHLHVFMVKD 647
Query: 531 SPKVVKEELVLILNGLSKIMKNGGF 555
K+++ LIL L++ MK G+
Sbjct: 648 KRHPHKKDIYLILKILTEQMKRVGY 672
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 181/364 (49%), Gaps = 36/364 (9%)
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D F LL C K V+ +++K ++F+QN ++ ++ CGF+ AR +F
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D M R+ SWNA++ + G LD AL+LF+ M +R+ SWN++++GF Q R EAL
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
+M S E+ V ++ + S LSACA L + G +HG + +S DV +G+ALV
Sbjct: 138 FVVDMHS---EDFV-LNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALV 193
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DMY KC V A F +M ++ ++W ++I+ + NG +A + F M G+ P+ +
Sbjct: 194 DMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEI 253
Query: 376 TFVGLLSACAHSGLVEKGRWCFV-MMRH----------VYLVEPH-----------VYHY 413
T + SACA + +G +M+H LV+ + V+
Sbjct: 254 TLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDR 313
Query: 414 ACMIDILSRAGLFS--------EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVA 465
+ D++S + S +A RL+ S ME +V W AL+ G +G E E V
Sbjct: 314 MPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENE--EAVR 371
Query: 466 QYLI 469
+L+
Sbjct: 372 LFLL 375
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 198/455 (43%), Gaps = 80/455 (17%)
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGI 133
AL+ G+L A N+F + D ++N M+ A + + L+ M
Sbjct: 94 ALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRD------RFEEALRFVVDMHSEDF 147
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
+ +F L C +D +G ++G + K DV++ ++++ ++ C V SA+
Sbjct: 148 VLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQR 207
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
FD+M R++VSWN++I Y ++G A +A
Sbjct: 208 AFDDMDVRNIVSWNSLITCYEQNGP-------------------------------AGKA 236
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG-YLRRSGLDCDVVIGT 312
LE+F M + +E PD+IT+ASV SACA L AI G +H ++ D+V+G
Sbjct: 237 LEVFVRMMNCGIE----PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGN 292
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKD-------------------------------TLA 341
ALVDMY KC V A VF MP +D ++
Sbjct: 293 ALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVS 352
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MM 400
W A+I+ + NG +EA F ++ E + P H TF LL+ACA+ ++ GR ++
Sbjct: 353 WNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHIL 412
Query: 401 RHVYLV----EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+H + + ++ +ID+ + GL + RL+ +E D W A++ G +G
Sbjct: 413 KHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDG-RLVFERMLERDNVSWNAMIVGYAQNG 471
Query: 457 -NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
E E + L+ + +H + + + AG
Sbjct: 472 YGTEALEIFREMLVSGERPDHVTMIGVLSACSHAG 506
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 192/532 (36%), Positives = 305/532 (57%), Gaps = 25/532 (4%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSY 83
K + ++ + + ++ +LK++ + + QT H +L+ FC+L++S +L Y
Sbjct: 2 KRNLNELVTTILTKINHLNQLKQLQSHLTTLGHSQT---HFYAFKLIRFCSLNLS-NLHY 57
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A +F+HI ++Y + +I A + + T KL+K ML + I P+ +P +
Sbjct: 58 AHQIFNHIHSPNIYLFTAIITAFSSQQHTT--------FKLFKTMLNSNIRPNNFIYPHV 109
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF-MACGFVTSARMLFDEMSNRD 202
LK +R LV V+ Q+VK G + V+ S++ + G + A +FDEMS R+
Sbjct: 110 LKSVKERF--LVDL-VHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERN 166
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM-- 260
+V + ++ GYLR GD++ L +F M R++ +WN++I+G Q G E + LF+EM
Sbjct: 167 IVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVF 226
Query: 261 ----QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
+ KP+++T+ VLSAC + G + GKW+HGY+ R G D + ALVD
Sbjct: 227 AAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVD 286
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME--AEGVRPNH 374
MYGKCG +E A VF+ +K +W +MI+ +AL+G ++A F +M GVRP+
Sbjct: 287 MYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDE 346
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
VTF+GLL+AC H GLVE+G F MM Y +EP + HY C+ID+L RAG F EA +++
Sbjct: 347 VTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVK 406
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
M MEPD VWG+LL GC++HG +L E A+ L+++DP N + L ++Y + G++D+
Sbjct: 407 GMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDE 466
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
++ + +K++ K +PGCS +EVD VH+F EEL IL L
Sbjct: 467 MRNVWSKLKQQKSYK-IPGCSWIEVDDKVHQFFSLDQSNPKTEELYNILESL 517
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 290/494 (58%), Gaps = 17/494 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
ID ++ELK+IHTQ++ + L + L+ + + A+ +L Y+ + +
Sbjct: 16 IDSFITLKELKQIHTQLVINGLLNNRE---LLGQFVASIAVRNPTNLLYSNQILDQCAKP 72
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG--ISPDCLTFPFLLKECTKRLD 152
L+ N MIRA S++ H K + Y ++L + +SPD TF FL++ C +
Sbjct: 73 TLFALNSMIRA----YSKSLTPH--KSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQSA- 125
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
G +V+G ++K G D V++ +I ++ ++S +F+ + D+V M+
Sbjct: 126 CEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSA 185
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+ GD+ A +LF M +R+ SWN++I G+ Q G++REAL LF+ MQ V K +
Sbjct: 186 CAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGV----KVN 241
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
++++ SV++AC +LGA+D GKW H Y+ ++ + V +GTALVDMY KCG V+RA VF
Sbjct: 242 EVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFW 301
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
EM +K+ W+ I A+NGYG++ + F M+ EG+ PN +TF+ +L C+ G V++
Sbjct: 302 EMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDE 361
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
GR F M+ + +EP + HY CM+D+ RAG EA I +MP++P WGALL C
Sbjct: 362 GRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNAC 421
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
+M+ N+ELGE ++ LI+++ NH YV+L ++YA G +D V R MK GI K +P
Sbjct: 422 RMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISK-LP 480
Query: 513 GCSSVEVDGVVHEF 526
GCS +EV+G VHEF
Sbjct: 481 GCSVMEVNGEVHEF 494
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 264/459 (57%), Gaps = 35/459 (7%)
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
M+ +SP TF L+K C+ + G +V+G + K+G VFVQ +++ + G
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV-- 245
+ AR +FDEMS RDV +W MI + R+GD+ A LF M RN SWN++I G+
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRL 120
Query: 246 -----------------------------QGGRAREALELFQEMQSSSVEEMVKPDKITI 276
Q + REAL +F EMQ++ ++ PD++T+
Sbjct: 121 RNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGID----PDEVTM 176
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
A+++SACA+LGA+D GK +H Y G D DV IG+AL+DMY KCG ++++ VF ++ K
Sbjct: 177 ATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRK 236
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
K+ W ++I A++GY +EA F M+ E ++PN VTF+ +L AC H+GLVE+GR
Sbjct: 237 KNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKR 296
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F+ M + + P + HY CM+D+L +AGL +A L+RSM MEP+ +WGALLGGC++H
Sbjct: 297 FLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHR 356
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
N+++ + L+P N +Y L +MYA+ R+ +V R MKE G+ K PG S
Sbjct: 357 NLKIAQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSW 416
Query: 517 VEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+E+D +H+F+ + +E+ +L L +K G+
Sbjct: 417 IEMDRKIHQFAASDKSHLASDEIYTLLVELDGQLKLSGY 455
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 185/490 (37%), Positives = 292/490 (59%), Gaps = 15/490 (3%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
N++ LK+ H +I + + N + F A S +G L YA +VF+H + Y
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDN-----LNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYL 80
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+N MIRA + + + HS + +Y+++ PD TFPF+LK + D G
Sbjct: 81 HNTMIRALSLL--DEPNAHS-IAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQ 137
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
++GQVV FG V V +I ++ +CG + AR +FDEM +DV WNA++ GY + G+
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197
Query: 219 LDVALDLFRRMK--KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
+D A L M RN SW +I+G+ + GRA EA+E+FQ M + E V+PD++T+
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM----LMENVEPDEVTL 253
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+VLSACA LG+++ G+ + Y+ G++ V + A++DMY K G + +A VF+ + +
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE 313
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
++ + WT +I+ A +G+G EA F M GVRPN VTF+ +LSAC+H G V+ G+
Sbjct: 314 RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRL 373
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F MR Y + P++ HY CMID+L RAG EA+ +I+SMP + + +WG+LL +H
Sbjct: 374 FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHH 433
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
++ELGE+ LI L+P N Y+ L ++Y+ GR+D+ + RN+MK G++K + G SS
Sbjct: 434 DLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKK-MAGESS 492
Query: 517 VEVDGVVHEF 526
+EV+ V++F
Sbjct: 493 IEVENRVYKF 502
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 302/530 (56%), Gaps = 30/530 (5%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL-SYATNVFS 89
L + + +C+ + +LK+IH +++S + I +LL A S + S S+A +F
Sbjct: 14 LNSLLKKCRALSQLKQIHANLLQS---HLPESPFAIGQLLSLAATSNNPSFFSHACLIFQ 70
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
++ +++ YN MIR S T + + Y ML G+ + TFP L+K CT
Sbjct: 71 NLSLRNIFMYNSMIRGYVLSHSPT------RAILCYLDMLNYGLLANNYTFPPLIKACTT 124
Query: 150 --RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWN 207
L+G V+ VV FG +D FV +++I + + +AR LFD + NRDVV W
Sbjct: 125 LGSSSKLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWT 184
Query: 208 AMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
AMI GY + GD++ A LF M +RN SW++++ + + G +E L LF+ MQ E
Sbjct: 185 AMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQ----EA 240
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
P++ + SVL+ACA+LGA+ G WVH Y ++ D + ++ TALVDMY KCGCVE A
Sbjct: 241 GTMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESA 300
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
F+ +P KD AW AMIS A+NG ++ + F +M + G +P TFV +L+AC H+
Sbjct: 301 LSTFQGIPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHA 360
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP---MEPDVFV 444
LV++G F M Y VEP + HYAC++D+++RAG+ +EAE+ I D V
Sbjct: 361 RLVKEGLKLFEQMSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANV 420
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
WGA+LG C+ +GN+E+G +V + L D+ + +V ++Y +AG + K+ R L+ E
Sbjct: 421 WGAMLGACRTYGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISE 480
Query: 505 RGIRKEVPGCSSVEVDGVVHEF-----SMKGSPKVVKEELVLILNGLSKI 549
G++K+ PGCS +EVDG V EF S +P++ K L+ LS I
Sbjct: 481 AGMKKK-PGCSIIEVDGTVEEFLAGDLSHSQAPQICK-----TLDSLSNI 524
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 196/559 (35%), Positives = 304/559 (54%), Gaps = 48/559 (8%)
Query: 30 ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
IL+ I +C + L+ +IK+ QT + + L+ + F A S L A + +
Sbjct: 782 ILKQIIKQCSTPKLLESALAAMIKTS--QTQNCY-LMNQ--FITACSSFNRLDLAVSFMT 836
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
+++ +++ YN +I+ S H + L+ Y +ML +SP T+ L++
Sbjct: 837 QMQKPNVFVYNALIKGFVTCS------HPIRSLEFYVRMLRDSVSPSSYTYSSLVQ--AS 888
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV----- 204
G S+ + KFG V +Q ++I + A G + AR +FDEM RD V
Sbjct: 889 AFASGFGESLQAHIWKFGFGFHVQIQTTLIGFYSASGRIREARKVFDEMPERDDVTWTTM 948
Query: 205 --------------------------SWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWN 238
+WN +I GY R G+L++A LF +M ++I SW
Sbjct: 949 VSAYRQVLDMDSANSLANQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWT 1008
Query: 239 SIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY 298
++I G+ + R REA+ +F +M +EE + PD++T+++V+SACA+LG ++ GK VH Y
Sbjct: 1009 TMINGYSRNKRYREAIAVFYKM----MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMY 1064
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
++G DV IG+ALVDMY KCG +ERA VF +PKK+ W ++I A +G+ +EA
Sbjct: 1065 TVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEA 1124
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F +ME E V+PN VTFV + +AC H+GLVE+GR + M Y + +V HY CM+
Sbjct: 1125 LKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVH 1184
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+ S+AGL EA LI SM EP+ +WGALL GC++H N+E+ E L+ L+P+N +
Sbjct: 1185 LFSKAGLIYEALELIGSMEFEPNAVIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNSGY 1244
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
Y L MYA+ R+ DV + R M+E GI K PG SS+ +D H F+ +E
Sbjct: 1245 YFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDE 1304
Query: 539 LVLILNGLSKIMKNGGFGQ 557
+ L+L+ + + M G+ Q
Sbjct: 1305 VCLLLDEIYEQMGLAGYVQ 1323
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 200/601 (33%), Positives = 307/601 (51%), Gaps = 84/601 (13%)
Query: 19 VSPPNKESTKLILRNAIDE---CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL 75
+ P+ ST+ +L + + C N+ ++K++H QI+KS N H L A
Sbjct: 8 IRTPSWFSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKS-----NLHVDLFVVPKLISAF 62
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S+ + ATN F+ ++ +++ YN MIRA+ ++++ + + M G
Sbjct: 63 SLCRQMLLATNAFNQVQYPNVHLYNTMIRAH------SHNSQPSQAFATFFAMQRDGHYA 116
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQV-------------------------------- 163
D TFPFLLK CT + V SV+ Q+
Sbjct: 117 DNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKK 176
Query: 164 --VKFGVCDDVFVQNSVISLFMACGFVTSARM---------------------------- 193
V G DV NS+IS G AR
Sbjct: 177 LFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDD 236
Query: 194 ---LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
LFDEM R+VVSW+ M++GY ++GD+++A LF +M +N+ SW I++GF + G A
Sbjct: 237 AFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLA 296
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
REA+ LF +M+ + + K D T+ S+L+ACA G + G+ +H ++ + C I
Sbjct: 297 REAISLFDQMEKACL----KLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEI 352
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
ALVDMY KCG + AY VF ++ KD ++W AM+ A++G+G +A + F+ M+ EG
Sbjct: 353 SNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGF 412
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
PN VT +G+L AC H+GL++ G F M Y + P V HY CM+D+L R G EA
Sbjct: 413 SPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAI 472
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
RLIR+MPM P+ +WG LLG C+MH VEL +V +L++L+P + + L ++YA AG
Sbjct: 473 RLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAG 532
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
++ V TR M+ G +K G SS+EV+ VHEF++ + + ++NGL +
Sbjct: 533 DWNCVANTRLRMRSIGTKKP-SGASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGLRHEL 591
Query: 551 K 551
K
Sbjct: 592 K 592
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 204/576 (35%), Positives = 307/576 (53%), Gaps = 76/576 (13%)
Query: 11 SLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL 70
S+ +P ++ P L L N CK +R LK++H QII N L
Sbjct: 82 SMSRTPNPLTNPPSNPQILSLFNP---CKTLRHLKQVHAQIIT----HHNSPFQLSALAS 134
Query: 71 FFCALSVSGSLSYATNVFSHIK-----------------------------------RSD 95
L+YA +F H++ + D
Sbjct: 135 LSALSPFPTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPD 194
Query: 96 LYTYNIMIRA---------------NACKSSETNDTH----------SGKCLKLYKQMLC 130
TY +I+A + KS D++ +GK L KQ+
Sbjct: 195 HMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFN 254
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
+ D +++ ++ K ++ V+ ++V C DV N++I+ + G +
Sbjct: 255 LCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMV----CRDVISWNTMINGYAIVGKIDE 310
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
A+ LFDEM R++VSWN+M+ G+++ G+++ A LF M R++ SWNS++ + Q G+
Sbjct: 311 AKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKP 370
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
EAL LF +M++ V KP + T+ S+LSACA+LGA+D G +H Y+ + ++ + ++
Sbjct: 371 NEALALFDQMRAVGV----KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIV 426
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
GTALVDMY KCG + A VF M KD LAW +I+ A++G KEA F+EM+ GV
Sbjct: 427 GTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGV 486
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
PN +TFV +LSAC+H+G+V++G+ M Y +EP V HY C+ID+L+RAG EA
Sbjct: 487 EPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAM 546
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
LI +MPMEP+ GALLGGC++HGN ELGE V + LI+L P + Y+ L ++YA A
Sbjct: 547 ELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAK 606
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++DD +K RNLMK GI K VPG S +E+ G+VH F
Sbjct: 607 KWDDARKVRNLMKVNGISK-VPGVSVIELKGMVHRF 641
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 178/433 (41%), Positives = 259/433 (59%), Gaps = 16/433 (3%)
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKEC--TKRLDGLVG 156
+N +IRA A L LY +L G P T P LLK + + G G
Sbjct: 174 HNALIRALA------GSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARG 227
Query: 157 AS--VYGQVVKFGVCDDVFVQNSVISLFMAC-GFVTSARMLFDEMSNRDVVSWNAMIIGY 213
+ V+ VK G+ + V N++I + G ++ A +L ++ D ++N +I Y
Sbjct: 228 LALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAY 287
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
R+G + A LF M RN SW++++ G+VQ G REAL LF MQ+ V +PD
Sbjct: 288 ARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGV----RPDD 343
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+ VL+ACA LG ++ GKWVHGYL+ + + V +GTALVDMY KCG ++ A VFK
Sbjct: 344 TVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKV 403
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M +K+ LAWT MI A++G G EA + F +ME GV+P+ + F+G L AC H+GLV+KG
Sbjct: 404 MKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKG 463
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R F M Y ++P + HY CM+D+L+R GL +EA ++ MPM+PD +WGAL+ GC+
Sbjct: 464 RELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCR 523
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
H NVEL E V ++ I+L+P YV L ++YA +GR ++ R+LM+E+G+ K PG
Sbjct: 524 FHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDK-TPG 582
Query: 514 CSSVEVDGVVHEF 526
CS+VE+ GV+H+F
Sbjct: 583 CSTVEIKGVIHQF 595
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 308/540 (57%), Gaps = 52/540 (9%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PN S L+ +++CK + LK++H +I + + H ++R+L + V
Sbjct: 4 PNPSSNHPTLQ-LLEKCKTLDTLKQVHAHMITTGLIF---HTYPLSRILLISSTIV---F 56
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETN-DTHSGKCLKLYKQMLC-TGISPDCLT 139
++A ++F+HI ++ YN +I SS N H+ LY ++L T + P+ T
Sbjct: 57 THALSIFNHIPNPTIFLYNTLI------SSLANIKPHTHIAFSLYSRVLTHTTLKPNGFT 110
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKF--GVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
FP L K C + G +++ V+KF CD FVQ ++++ + CG V + R LF++
Sbjct: 111 FPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDP-FVQAALLNYYAKCGKVGACRYLFNQ 169
Query: 198 MSNRDVVSWNAMIIGYLR-SGDL--DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
+S D+ SWN+++ Y+ SG + DV+L L E L
Sbjct: 170 ISKPDLASWNSILSAYVHNSGAICEDVSLSL--------------------------EVL 203
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
LF EMQ S ++K +++T+ +++SACA LGA+ G W H Y+ + L + +GTAL
Sbjct: 204 TLFIEMQKS----LIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTAL 259
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+DMY KCGC++ A +F ++P +DTL + AMI FA++GYG +A D F++M EG+ P+
Sbjct: 260 IDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDD 319
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
VT V + +C+H GLVE+G F M+ VY VEP + HY C++D+L RAG EAE +
Sbjct: 320 VTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVL 379
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
+MPM+P+ +W +LLG ++HGN+E+GE V ++LI L+P YV L +MYA R+DD
Sbjct: 380 NMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDD 439
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
VK+ R LMK+ GI K VPG S VEV G +HEF M +E+ L L +S+ + G
Sbjct: 440 VKRVRKLMKDHGINK-VPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYG 498
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 196/581 (33%), Positives = 312/581 (53%), Gaps = 78/581 (13%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
++ LK IH +++ L ++ L+ ++L F G+ +Y+ + K +++ +N
Sbjct: 23 LKHLKHIHAALLR---LGLDEDTYLLNKVLRFSF--NFGNTNYSFRILDQTKEPNIFLFN 77
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
MIR ND + +++Y M G+SPD TFPF+LK C + LD +G ++
Sbjct: 78 TMIRGLV-----LNDCFQ-ESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMH 131
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
VVK G D FV+ S+I+L+ CGF+ +A +FD++ +++ SW A I GY+ G
Sbjct: 132 SLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCR 191
Query: 221 VALDLFRRMKK---------------------------------------RNIFSWNSII 241
A+D+FRR+ + RN+F +++
Sbjct: 192 EAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALV 251
Query: 242 TGFVQGGRAREALELFQEMQSSSV---------------------------EEMVKPDKI 274
+ + G A +F M ++ E +KPD
Sbjct: 252 DFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCY 311
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
+ VL +CA LGA++ G W + + + V+GTAL+DMY KCG ++RA+ VF+ M
Sbjct: 312 AMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGM 371
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
KKD + W A IS A++G+ K+A F +ME G++P+ TFVGLL AC H+GLVE+GR
Sbjct: 372 RKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGR 431
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M V+ + P + HY CM+D+L RAG EA +LI+SMPME + VWGALLGGC++
Sbjct: 432 RYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRL 491
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
H + +L E V + LI L+P + YV L ++YA + ++++ K R++M ERG++K +PG
Sbjct: 492 HRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKK-IPGY 550
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
S +EVDGVVH+F + + + E++ L L+K +K G+
Sbjct: 551 SWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGY 591
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 197/549 (35%), Positives = 299/549 (54%), Gaps = 68/549 (12%)
Query: 30 ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
ILR C + +E +IHTQ+I S LQ + L S S+ +A ++F
Sbjct: 61 ILRTLESCCGSTKEFNQIHTQLIVSGLLQQPLAAGRAVKTL----CSFPDSVQHAVSLFE 116
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
++ D + N ++R ND ++ Y+QM+ ++P+ TFP L+K C +
Sbjct: 117 GLEEPDAFICNTIMRTYV----NVNDPYTALGF-YYEQMVRKCVAPNHYTFPLLVKVCWE 171
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG----------------FVT---- 189
G ++ +++KFG D+FV+NS+I ++ CG VT
Sbjct: 172 IGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSM 231
Query: 190 -----------SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWN 238
+AR LF+EM RD+ SWN+MI GY+ +GD+ A DLF +M R+I SWN
Sbjct: 232 IDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWN 291
Query: 239 SIITGFVQGGRAREALELFQEMQSSSV----------------EEMVK----------PD 272
+I G+ Q A ELF M +V +E ++ P+
Sbjct: 292 CMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMPN 351
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSG-LDCDVVIGTALVDMYGKCGCVERAYGVF 331
+ T+ SVL+ACA+LG +D GKW+H Y++ + ++ DV++ TAL+ MY KCG ++ A VF
Sbjct: 352 EATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVF 411
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+M + ++W +MI + ++G +A + F +ME G PN TF+ +LSACAHSG++
Sbjct: 412 DKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMIL 471
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+G W F +MR Y +EP V HY CM+D+L RAGL + E LIR MPME +WGALL
Sbjct: 472 EGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSA 531
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C+ H N EL E VA+ LI+L+P + Y+ L ++YA G++DDV+ R +MKERG+ K
Sbjct: 532 CRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTT 591
Query: 512 PGCSSVEVD 520
G S V ++
Sbjct: 592 -GFSWVHIE 599
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 201/525 (38%), Positives = 304/525 (57%), Gaps = 27/525 (5%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR-SDLYT 98
++ ++K+IH Q++ Q + C +LS+A VF
Sbjct: 67 SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCR-----NLSFARIVFDQFPSLPPTII 121
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG--ISPDCLTFPFLLKECTKR--LDGL 154
+N+MI+A + S S + L L+ QML G S D TF F+ C++ L G
Sbjct: 122 WNLMIQAYSKTPS------SQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGY 175
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G +V+G VVK G D+FV NS+++++ + A+ +FDEM RDV++W +++ GY
Sbjct: 176 -GENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYA 234
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
G+L A +LF M RN SW ++ G+V EAL+ F +M + VKP++
Sbjct: 235 MRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDML---CHDEVKPNEA 291
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
+ S+LSACA+LGA+D GKW+H Y+ ++ + I TAL+DMY KCG ++ A VF +
Sbjct: 292 VLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGL 351
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
K+D L WT+MIS +++G G E TF EM AEG +P+ +T +G+L+ C+HSGLVE+G
Sbjct: 352 HKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGL 411
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M ++ + P + HY C+ID+L RAG A I+SMPMEPDV W ALL C++
Sbjct: 412 SIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRI 471
Query: 455 HGNVELGEKVAQYLIDLDPLNH-AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
HG+V+LGE++ ++ +L P +H YV L ++YA G+++ V K R M +RG + PG
Sbjct: 472 HGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRG-SEGCPG 530
Query: 514 CSSVEVDGVVHEF--SMKGSPKVVKEELVLILNG-LSKIMKNGGF 555
CS +E+DGVVHEF + K P++ E+ LN L +I GG+
Sbjct: 531 CSWIEIDGVVHEFLAADKLHPRI--SEINKKLNEVLRRISIEGGY 573
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 298/524 (56%), Gaps = 45/524 (8%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L AI C + +LK I ++++ Q L ++L+ A+++SG ++YA +FS
Sbjct: 10 LVAAIKRCTRVGDLKAIQAHMVRANLTQDT---FLTSKLIESSAVTLSGHVAYAHRIFSC 66
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
+L+ +N +IR + S + LY+ M GISP+ TF F+LK C K
Sbjct: 67 THHPNLFMWNTIIRGYSISDSPIT------AIALYRDMFLCGISPNSYTFGFVLKACCKL 120
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
L G ++ Q+VK G+ + + N +I L+ ACG
Sbjct: 121 LRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGC----------------------- 157
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
+D A +F M + + SW+++++G+ Q G+A EAL+LF+EMQ+ E V
Sbjct: 158 --------MDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQA----ENVS 205
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
D T+ASV+ C LGA+D GKWVH Y+ + G+ DVV+GTALV MY KCG ++ A V
Sbjct: 206 SDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKV 265
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F+ M ++D AW+ MI+ +A++G+G++A F M+ PN VTF +LSAC+HSGLV
Sbjct: 266 FQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLV 325
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
EKG F M Y + P + HY CM+D+ RAG+ A + I++MP+EP+V +W LLG
Sbjct: 326 EKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLG 385
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
C+ HG +LGE +++ ++ LDP + YV + ++YA GR+ V + R+LMK++ +K+
Sbjct: 386 ACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQ 445
Query: 511 VPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
G SS+E++ +VH+F M +E++ +L+ +++ +K G
Sbjct: 446 -HGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVG 488
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 289/548 (52%), Gaps = 49/548 (8%)
Query: 22 PNKESTKLILRNAIDE---CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
P S + +L I + C ++ ++K+IH Q++K+ N H A S+
Sbjct: 8 PTWVSKRRLLEQKISDLHRCSSLNQVKQIHAQVLKA-----NLHRESFVGQKLIAAFSLC 62
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
++ A NVF+ I+ D+ YN +IRA+ S ++ +M +G+ D
Sbjct: 63 RQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPL------LAFSVFFEMQDSGVCADNF 116
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T+PFLLK C+ ++ V ++ QV K G C D+FV NS+I + G + AR LFDEM
Sbjct: 117 TYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEM 176
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
RD VSWN ++ GY+++G+++ A +LF +M RN+ SW
Sbjct: 177 PERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSW--------------------- 215
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
S++E +K D T+ S+LSACA G + GK VH + R+ C + AL+DMY
Sbjct: 216 ----STMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMY 271
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG +E A +F M +KD ++W A+I A++G+G++A F M+ EG P+ VTFV
Sbjct: 272 AKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFV 331
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L AC H+G V++G F M Y V P V HY CM+D+L R G EA RL+ SMP+
Sbjct: 332 GVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPL 391
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EP+ +WG LLG C+MH L E+V L+ + + L ++YA AG +D+
Sbjct: 392 EPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANI 451
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQY 558
R MK I+K G SS+EVD VHEF++ + + ++GL GQ+
Sbjct: 452 RLRMKSTSIQKP-SGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGL---------GQH 501
Query: 559 IRGLSMEA 566
I L+ +
Sbjct: 502 INKLTTSS 509
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 192/527 (36%), Positives = 301/527 (57%), Gaps = 17/527 (3%)
Query: 26 STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYAT 85
ST L ++ C++M E K+I I S Q HH +RLL F A+S G + ++
Sbjct: 10 STNQTLIALLENCRSMSEFKQIQAFFITSGLSQ---HHPFASRLLSFSAISSWGDIDHSY 66
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
+F I + +N +IR + K N + + ++ +ML G+ PD LT+PF+ K
Sbjct: 67 RIFLQIPSPTISNWNSIIRGFS-KGKNPNPS-----VSVFVKMLRFGVCPDHLTYPFIAK 120
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
+ + + +V+ ++ K G+ D F+ NS+I ++ +CG + SAR +FDEM R+ VS
Sbjct: 121 AVARLSELRLALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVS 180
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
WNAM+ GY + GDLD A +F M R++ SW+S+I G V+GG AL +F+ M+
Sbjct: 181 WNAMLDGYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVG- 239
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
K +++T+ SVL ACA+LGA++ G+ +H Y+ + + +V+ T+L+DMY KCG +E
Sbjct: 240 ---PKANEVTMVSVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIE 296
Query: 326 RAYGVFKEMP--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
A VF+ +P + D L W +I A +G E+ + F+EM+ G+ P+ +T++ L SA
Sbjct: 297 EAIAVFRGVPMDQTDVLMWNTIIGGLATHGLVHESLELFKEMQVLGIVPDEITYLCLFSA 356
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
CAH GLV + W F + P HYACM+D+LSRAG +EA I MPMEP
Sbjct: 357 CAHGGLVHEA-WHFFKSLGKQGMVPKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTAS 415
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+ GALL GC H +L E+V + LI+L+P + Y+ L ++YA +D+ + R M+
Sbjct: 416 MLGALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAME 475
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
RG++K PG S VEV G +H F E++ ++LN + + M
Sbjct: 476 RRGVKKS-PGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQM 521
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 183/479 (38%), Positives = 284/479 (59%), Gaps = 17/479 (3%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
K+ L +IH ++ Q+N ++ + CA ++YA +FS +++
Sbjct: 20 KSRTHLTQIHAHFLRHGLHQSNQ---ILAHFISVCA--SFNRIAYADRLFSQSHNPNIFL 74
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+N +I+A+ S + H + L L+ M I PD TF LLK C + +G
Sbjct: 75 FNSIIKAH----SLSVPFH--QSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQC 128
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
V +V + G ++ V+ L++ C + A +FDEMS+RDVV WN MI G+ ++G+
Sbjct: 129 VISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKTGN 188
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+D L LFR+M +R++ SWN+II+ Q R EALELFQ+M+ E KPD++T+ +
Sbjct: 189 VDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQME----EHGFKPDEVTVVT 244
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSG-LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
+L C+ LGA++ G+ +H Y G L +G +L+D Y KCG +E+AY +F++M K
Sbjct: 245 MLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCK 304
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
++W +I FALNG G+ A D F EM E ++PN TFV +L+AC HSGL+EKGR F
Sbjct: 305 SVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELF 364
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
M Y ++P + H+ CM+D+L R G EA +LI+SMPM+P+ +WGA+LG C+ HGN
Sbjct: 365 SSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGN 424
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
++L E + LI L+P N YV L +M A+ GR+++V+ R M+E+ ++K PG S+
Sbjct: 425 LKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKK-APGQSA 482
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 185/444 (41%), Positives = 272/444 (61%), Gaps = 23/444 (5%)
Query: 87 VFSHIKRS----DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPF 142
V +H+ +S D Y N +I A +GK L KQ+ D +++
Sbjct: 22 VHTHVVKSGFECDSYIVNSLIHLYA----------NGKDLGAAKQLFSLCSDRDVVSWNA 71
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
++ KR G +G + V VC DV N++I+ + G + A+ LFDEM R+
Sbjct: 72 MIDGYVKR--GEMGHT--RMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERN 127
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
+VSWN+M+ G+++ G+++ A LF M R++ SWNS++ + Q G+ EAL LF +M++
Sbjct: 128 LVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRA 187
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
V KP + T+ S+LSACA+LGA+D G +H Y+ + ++ + ++GTALVDMY KCG
Sbjct: 188 VGV----KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCG 243
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
+ A VF M KD LAW +I+ A++G+ KEA F+EM+ V PN +TFV +LS
Sbjct: 244 KISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLS 303
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
AC+H+G+V++G+ M Y +EP V HY C+ID+L+RAGL EA LI +MPMEP+
Sbjct: 304 ACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNP 363
Query: 443 FVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
GALLGGC++HGN ELGE V + LI+L P + Y+ L ++YA A ++DD +K RNLM
Sbjct: 364 SALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLM 423
Query: 503 KERGIRKEVPGCSSVEVDGVVHEF 526
K GI K VPG S +E+ G+VH F
Sbjct: 424 KVNGISK-VPGVSVIELKGMVHRF 446
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 189/494 (38%), Positives = 298/494 (60%), Gaps = 17/494 (3%)
Query: 77 VSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG---KCLKLYKQMLCTGI 133
V G + A +F I L ++N MI A H G + L+++M G+
Sbjct: 135 VCGLIHCARKLFDDITDKTLVSWNSMIGGYA---------HMGNWKEAFLLFRKMREWGM 185
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
PD TF LL C++ D +G V+ + GV D+ V+N+++ ++ CG + SA+
Sbjct: 186 EPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQA 245
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
+FD ++VVSW +MI Y + G ++VA +F +M +N+ SWNS+I+ +++ G+ REA
Sbjct: 246 IFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREA 305
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
L+LF +M++S V PD+ T+ S+L+AC+ LG + GK +H Y+ + V + +
Sbjct: 306 LDLFNKMRNSRV----VPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNS 361
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
L+DMY KCG V A +F EMP K+ ++W +I AL+G G EA F EM+A+G P+
Sbjct: 362 LIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPD 421
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
+T GLLSAC+HSGLV+ G + F M +Y V + HYACM+D+L R GL EA LI
Sbjct: 422 EITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELI 481
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
MPM+PDV VWGALLG C++HGNVE+G+++ + L++L+P + YV + ++Y +A R++
Sbjct: 482 GRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWE 541
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNG 553
DVKK R LM +RGI+K SS+E+DG ++EF + + + +L+ L+ +++
Sbjct: 542 DVKKIRKLMIDRGIKKG-RAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSA 600
Query: 554 GFGQYIRGLSMEAQ 567
G+ I + EA+
Sbjct: 601 GYLCNISSVFFEAE 614
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 217/451 (48%), Gaps = 85/451 (18%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
MR LK +H QII TN+ +L +L+ FCA+ +G L YA +F I + + + YN
Sbjct: 1 MRGLKLLHAQIILHGL--TNETLTL-GKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+IR +N + L+++M+C+G+SP+ T PF+LK C + V+
Sbjct: 58 SLIRG------YSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVH 111
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G +K G+ VFVQN++I++++ CG + AR LFD+++++ +VSWN+MI GY G+
Sbjct: 112 GLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWK 171
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A LFR+M++ W ++PD T ++L
Sbjct: 172 EAFLLFRKMRE-----WG------------------------------MEPDGFTFVNLL 196
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC------------------- 321
S C+ +D G++VH + +G+ D+++ ALVDMY KC
Sbjct: 197 SVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVV 256
Query: 322 ------------GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
G +E A +F +MP K+ ++W +MIS + G +EA D F +M
Sbjct: 257 SWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSR 316
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH----VYHYACMIDILSRAGL 425
V P+ T V +L+AC+ G + G+ H Y++ V Y +ID+ ++ G
Sbjct: 317 VVPDEATLVSILAACSQLGDLVMGK-----KIHNYILSNKGAYGVTLYNSLIDMYAKCGP 371
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
A + MP + ++ W ++G +HG
Sbjct: 372 VVTALDIFLEMPGK-NLVSWNVIIGALALHG 401
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 11/289 (3%)
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
+GDL A +F ++ + N F +NS+I G+ +A+ LF+ M S + P++ T
Sbjct: 35 AGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLS----PNEFT 90
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ VL AC A VHG + G+ V + AL+ +Y CG + A +F ++
Sbjct: 91 LPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDIT 150
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
K ++W +MI +A G KEAF FR+M G+ P+ TFV LLS C+ S ++ GR+
Sbjct: 151 DKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRY 210
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
+ + V+ + ++D+ ++ G A+ I E +V W +++ H
Sbjct: 211 VHFCIE-ITGVKIDIIVRNALVDMYAKCGNLHSAQA-IFDRTQEKNVVSWTSMISAYAQH 268
Query: 456 GNVELGEKVAQYLIDLDP-LNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
G++E VA+ + D P N + ++ Y + G++ + N M+
Sbjct: 269 GSIE----VARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMR 313
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 293/516 (56%), Gaps = 25/516 (4%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M E++++H Q + S L +HHSL R L +++S +SYA ++F I D++ YN
Sbjct: 1 MHEVRQLHAQFVVSGLL---NHHSLCGRRLLESYVTMS-EISYARSIFERIPYLDVFVYN 56
Query: 101 IMIRA-----NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
MIR S + CLK PD T+ F+LK C+ +
Sbjct: 57 TMIRGLMLGKRPYDSLLLFNELLLGCLK-----------PDNYTYTFVLKACSNQKALPE 105
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G V+ Q++K G+ + + +S+I ++ + G + A + E S + ++ N+MI GYL
Sbjct: 106 GKQVHCQIIKAGISPNTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLS 165
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
G +D A +F +MK +++ SW++IITG + G EAL LF++M S P++
Sbjct: 166 KGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALALFEDMMVSHT----LPNESA 221
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ S+LSACA+LGA+ G+W+H Y+ R G D + + TAL+DMY KCG ++ Y F++MP
Sbjct: 222 LVSLLSACAHLGALHQGRWIHAYIDRIGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMP 281
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
++D + W A+IS FA+ G K+ F+ F EM A+G+ PN V FV +LSAC+H+G VE+G+
Sbjct: 282 RRDIVTWGAIISGFAIYGQAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKL 341
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M + P + HY CM+D+L RAG EAE I SMP +P+ +WG++L C+ H
Sbjct: 342 YFNQMMVDLGIRPSIEHYGCMVDLLGRAGRLKEAEEFIISMPEKPNSVIWGSMLSACRTH 401
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
++ G ++LI+L+P + Y M+ AG + K R +++++G+ + G S
Sbjct: 402 NDLNRGSWAFRHLIELEPRSGDRYKLAGLMFGNAGEKQEATKIRKMIEDQGM-ETTSGSS 460
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+EVDG +HEF + + E+ + GL+ +++
Sbjct: 461 FIEVDGTIHEFLVGDTIHNEAAEIYKVWKGLNGLLE 496
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 166/416 (39%), Gaps = 110/416 (26%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIK---SPCLQTNDHHSLI-------TRLLF 71
P+ + +L+ A K + E K++H QIIK SP T+ H SLI + +
Sbjct: 85 PDNYTYTFVLK-ACSNQKALPEGKQVHCQIIKAGISP--NTHIHSSLIHMYTSSGSIVEA 141
Query: 72 FCALS-------------VSGSLS-----YATNVFSHIKRSDLYTYNIMIRANACKSSET 113
C L +SG LS A +F +K D+ +++ +I C
Sbjct: 142 ECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWSAII--TGCTK--- 196
Query: 114 NDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF 173
N H+ + L L++ M+ + P+ LL C G ++ + + G +
Sbjct: 197 NGMHT-EALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRIGADMSIR 255
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRN 233
+ ++I ++ CG + S F +M RD+V+W A+I
Sbjct: 256 LSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAII----------------------- 292
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
+GF G+A++ ELF+EM + + + P+ + ++LSAC++ G ++ GK
Sbjct: 293 --------SGFAIYGQAKKCFELFEEM----LADGIYPNGVIFVAILSACSHAGYVEEGK 340
Query: 294 -WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+ + + G+ + +VD+ G+ G ++ A MP+K
Sbjct: 341 LYFNQMMVDLGIRPSIEHYGCMVDLLGRAGRLKEAEEFIISMPEK--------------- 385
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
PN V + +LSAC + +G W F RH+ +EP
Sbjct: 386 -------------------PNSVIWGSMLSACRTHNDLNRGSWAF---RHLIELEP 419
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 291/532 (54%), Gaps = 37/532 (6%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +C +++ K+IH QI K+ L T+ + +LL CA+++S +L YA +F H
Sbjct: 9 LSKCSSLKPTKQIHAQICKTG-LHTDP--LVFGKLLLHCAITISDALHYALRLFHHFPNP 65
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
D + +N +IR+ + + + H ++L +Q +SPD TF F LK
Sbjct: 66 DTFMHNTLIRSLSLSQTPLSSLH--PFIQLRRQ---PTLSPDSFTFAFALKAVANSRHLR 120
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G ++ Q + G +FV ++IS++ CG SAR +FDEMS +VV+WNA++
Sbjct: 121 PGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAF 180
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ------------- 261
R GD++ A D+F M RN+ SWN ++ G+ + G A +F EM
Sbjct: 181 RCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVG 240
Query: 262 --------------SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
+ E ++ +++++ VLSACA GA + GK +HG++ ++G
Sbjct: 241 FAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYV 300
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKEAFDTFREME 366
+ AL+D Y KCG V A VF+ MP + ++WT++I+ A++G G+EA F EME
Sbjct: 301 GSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEME 360
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
GVRP+ +TF+ LL AC+HSGLVE+G F M+++Y +EP + HY CM+D+ RA
Sbjct: 361 ESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARL 420
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
+A I MP+ P+ +W LLG C +HGN+E+ E V L ++DP N +V L ++Y
Sbjct: 421 QKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVY 480
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
A AG++ DV R M E ++K PG S +E+D V++ F P V EE
Sbjct: 481 AVAGKWKDVSSIRRTMTEHSMKK-TPGWSMIEIDKVIYGFVAGEKPNEVTEE 531
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 307/527 (58%), Gaps = 17/527 (3%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + ID CK++ ++K+ H +I + + + + L AL+ SL+YA +F
Sbjct: 182 LSSLIDLCKSINQIKQTHANLITTAQITLP---VIANKFLKNVALA---SLTYAHKLFDQ 235
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDCLTFPFLLKECTK 149
I + DL+ YN MI++++ D+ + +++ ++ +G P+ +F F C
Sbjct: 236 IPQPDLFIYNTMIKSHSMSPHSYLDS-----IAVFRSLIRDSGYFPNRYSFVFAFGACGN 290
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+ G V+ VK G+ +VFV N++I +F G V AR +FD +RD SWN M
Sbjct: 291 GMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTM 350
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I Y+ SG++ +A +LF M +R++ SW++II G+VQ G EAL+ F +M S V
Sbjct: 351 IGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEV---- 406
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
KP++ T+ S L+AC+ L A+D GKW+H Y+RR + + + +L+DMY KCG ++ A
Sbjct: 407 KPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASS 466
Query: 330 VFKEMP-KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF E K+ W AMI FA++G +EA + F +M+ E V PN VTF+ LL+AC+H
Sbjct: 467 VFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGY 526
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+V++G+ F +M Y + P + HY CM+D+LSR+G ++E +I SMPM PDV +WGAL
Sbjct: 527 MVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGAL 586
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
L C+++ ++E G ++ + + ++DP + V L ++Y+ +GR+++ + R + R
Sbjct: 587 LNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDR 646
Query: 509 KEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K++PG SS+E++GV HEF + E+ L+ + +K G+
Sbjct: 647 KKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGY 693
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/497 (37%), Positives = 291/497 (58%), Gaps = 46/497 (9%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
MR L+++H I+ P L + +++++ FCALS G+++YA +VF+ I +++++N
Sbjct: 1 MRVLRQLHAHILTRP-LPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWN 59
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASV 159
+I K T S + + L+K++ TG P+ T F+LK C G V
Sbjct: 60 SLI-----KGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQV 114
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ V+K G +FVQ S+++ + C + AR +F+EM
Sbjct: 115 HSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMP-------------------- 154
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
RN+ +W ++I+G + G EA+ELF+EMQ + ++ PD +T+ SV
Sbjct: 155 -----------VRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQ----PDAMTLVSV 199
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
+SACA GA+D G W+H Y+ + + D+ + TALVDMY KCGC+ERA VF MP KDT
Sbjct: 200 VSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDT 259
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
AW++MI FA +G ++A D F++M V P+HVTF+ +LSACAH GLV +GR + +
Sbjct: 260 TAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSL 319
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + +EP V HY C +D+L R+GL EA R+ +M + P+ W +LL GC+ +
Sbjct: 320 MLE-FGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLN 378
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LGE VA+YL++L+PLN Y+ + ++Y+ +++ + + R +MKE+ I K VPGCSS+EV
Sbjct: 379 LGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCI-KPVPGCSSIEV 437
Query: 520 DGVVHEFSM--KGSPKV 534
DGVVHEF M + P+V
Sbjct: 438 DGVVHEFVMGDQSHPEV 454
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/521 (37%), Positives = 292/521 (56%), Gaps = 31/521 (5%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C R+L +H +++ L+ + L T+++ C + +++A VF+ ++ +L+
Sbjct: 24 CVTFRDLLRVHGHVVR---LRISQSSYLATQIVHLC--NAHRRVTHAARVFAQVRDPNLH 78
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP-------DCLTFPFLLKECTKR 150
+N MI+A A N H + +Y +ML SP D T+PFLLK C
Sbjct: 79 LHNAMIKAYA-----QNHQHR-DAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGT 132
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
+G V+ VV+ G VQNS+I ++ G + A +FDEM RDVVSWN +I
Sbjct: 133 AALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLI 192
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
+ R G + A LF M + I +W ++++G+ G A++ F+ MQ+ E
Sbjct: 193 SAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFE---- 248
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD ++I +VL ACA LGA++ G+W++ Y +R G+ I AL++MY KCGC+++A +
Sbjct: 249 PDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQL 308
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGL 389
F M KD ++W+ +I A +G EA F EME EG VRPN +TFVGLLSAC+++GL
Sbjct: 309 FDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGL 368
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V++G F M VY VEP V HY C++D+L R+G A L+R MP+ D VWG+LL
Sbjct: 369 VDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLL 428
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C+ HG+V+ A+ L++L+P + V L ++YA A R+ DV TR ++ R +RK
Sbjct: 429 SACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRK 488
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
PGCS +EV VV EF V E L L GL+ ++
Sbjct: 489 -TPGCSLIEVGNVVREF-------VAGEGLSSELGGLAGVL 521
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/523 (36%), Positives = 291/523 (55%), Gaps = 50/523 (9%)
Query: 7 MVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLI 66
M S L +P + P + L + C ++R L ++H +KS H +L+
Sbjct: 1 MSSSPLTATPTPLLPAKPKGP---LLPHLPHCTSLRALAQLHAAAVKS---GLGAHPALV 54
Query: 67 TRLLFFCAL--SVSGSLSYATNVFSHIKRS-DLYTYNIMIRANACKSSETNDTHSGKCLK 123
TRLL C + L+YA VF I D+ YN ++R A +SS+ + + +
Sbjct: 55 TRLLTLCTKQGAAPAHLAYARQVFDRIPTPGDVVWYNTLLRGYA-RSSDG----AAEAAR 109
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
+ +ML G++PD TF LLK C G G +G VK G D +V ++I+++
Sbjct: 110 VLARMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKTGAADHEYVLPTLINMYA 169
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
CG SAR +F + N D V S+N++IT
Sbjct: 170 ECGDARSARAMFGRVPNGDCV------------------------------VSYNAMITA 199
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
V+ R EAL LF+EMQ+ + KP +T+ SVLSACA LGA++ G+W+H Y+R++G
Sbjct: 200 AVRSSRPGEALVLFREMQAKGL----KPTSVTVTSVLSACALLGALELGRWIHEYVRKAG 255
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
LD V + TAL+DMYGKCG +E A VF+ M +D AW+ MI +A + YG+EA F
Sbjct: 256 LDSLVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSVMIVAYANHSYGREAISLFE 315
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
EM+ +G+RP+ VTF+G+L AC+HSG+V +G F MR Y + P + HY C+ D+L+R+
Sbjct: 316 EMKKQGIRPDAVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVPGIKHYGCVTDLLARS 374
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
G +A + I +P++P +W LL C HG V+LG++V + +++LD + + YV
Sbjct: 375 GQLEKAYKFIDELPIQPTAILWRTLLSACGSHGAVDLGKRVFERILELDDTHGSDYVIFS 434
Query: 484 DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++ A G+++++ + R LM E+G+ K VPGCSS+E+D VHEF
Sbjct: 435 NLCANTGKWEEMNRVRKLMNEKGVVK-VPGCSSIEIDNRVHEF 476
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 191/509 (37%), Positives = 296/509 (58%), Gaps = 44/509 (8%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
MR L++IH +++ ++ L +++ FCALS G + YA +FS I+R +++++N
Sbjct: 1 MRVLRQIHARLLTHAMPISSISFGL-CKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWN 59
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGI-SPDCLTFPFLLKECTKRLDGLVGASV 159
MIR C S+T S + + L+++M+ G +P+ T F+LK C+ G V
Sbjct: 60 SMIRG--CSQSQTP---SKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQV 114
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ V+K G FV+ ++++ + C + A +FDE+++
Sbjct: 115 HANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITD------------------- 155
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
RN+ +W+++I+G+ + G EAL LF++MQ + V PD++T+ SV
Sbjct: 156 ------------RNLVAWSTMISGYARIGLVNEALGLFRDMQKAGV----VPDEVTMVSV 199
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
+SACA GA+D GKWVH Y+ + ++ D+ + TALV+MY KCGC+ERA VF MP KDT
Sbjct: 200 ISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDT 259
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
AW++MI A+NG ++A + F ME V+PNHVTF+G+LSACAHSGLV +GR +
Sbjct: 260 KAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSS 319
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M +V P + Y CM+D+L RA L +A L+ +MP+ P+ +W LL GC+ N++
Sbjct: 320 MLEFGIV-PSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLD 378
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
E VAQ L++L+P N Y+ L ++YA +++ + + R MK GI K VPGCSS+EV
Sbjct: 379 KSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGI-KAVPGCSSIEV 437
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSK 548
DG+VHEF M E+ IL +SK
Sbjct: 438 DGLVHEFVMGDWSHPEAMEVREILRDISK 466
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 262/426 (61%), Gaps = 6/426 (1%)
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
M+ +A S + + L L+ +M +G++ D + L C++ L+ +G V+G
Sbjct: 235 MVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHG 294
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR-DVVSWNAMIIGYLRSGDLD 220
VK GV D V ++N++I L+ +CG + AR +FD+ D++SWN+MI GYLR G +
Sbjct: 295 LAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQ 354
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A LF M ++++ SW+++I+G+ Q EAL LFQEMQ V +PD+ + S +
Sbjct: 355 DAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGV----RPDETALVSAI 410
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SAC +L +D GKW+H Y+ R+ L +V++ T L+DMY KCGCVE A VF M +K
Sbjct: 411 SACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVS 470
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
W A+I A+NG +++ + F +M+ G PN +TF+G+L AC H GLV GR F M
Sbjct: 471 TWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSM 530
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
H + +E ++ HY CM+D+L RAGL EAE LI SMPM PDV WGALLG C+ H + E+
Sbjct: 531 IHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEM 590
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
GE++ + LI L P + F+V L ++YA G + +V + R +M + G+ K PGCS +E +
Sbjct: 591 GERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVK-TPGCSMIEAN 649
Query: 521 GVVHEF 526
G VHEF
Sbjct: 650 GTVHEF 655
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 238/499 (47%), Gaps = 88/499 (17%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS-GSLSYATNVFS 89
L + + CK R K++ +Q I + L T+ + + +RL+ F + S + Y+ +F+
Sbjct: 6 LDSLLQSCKCPRHFKQLLSQTILTG-LITDPYAA--SRLINFSSHSTTLVPFHYSLRIFN 62
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
H++ + +T+N ++RA+ N H + L YK L + PD T+P LL+ C
Sbjct: 63 HLRNPNTFTWNTIMRAHLYLQ---NSPH--QALLHYKLFLASHAKPDSYTYPILLQCCAA 117
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
R+ G ++ V G DV+V+N++++L+ CG V SAR +F+E D+VSWN +
Sbjct: 118 RVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTL 177
Query: 210 IIGYLRSGDLDVALDLFRRMKKRN---------------------------------IFS 236
+ GY+++G+++ A +F M +RN + S
Sbjct: 178 LAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVS 237
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
W+++++ + Q EAL LF EM+ S V + S LSAC+ + ++ G+WVH
Sbjct: 238 WSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEV----VVVSALSACSRVLNVEMGRWVH 293
Query: 297 GYLRRSGLDCDVVIGTALVDMYG--------------------------------KCGCV 324
G + G++ V + AL+ +Y +CG +
Sbjct: 294 GLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSI 353
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
+ A +F MP+KD ++W+AMIS +A + EA F+EM+ GVRP+ V +SAC
Sbjct: 354 QDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISAC 413
Query: 385 AHSGLVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
H ++ G+W H Y+ ++ +V +ID+ + G A + +M E
Sbjct: 414 THLATLDLGKWI-----HAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME-EK 467
Query: 441 DVFVWGALLGGCQMHGNVE 459
V W A++ G M+G+VE
Sbjct: 468 GVSTWNAVILGLAMNGSVE 486
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/449 (39%), Positives = 270/449 (60%), Gaps = 11/449 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G++ A +F +L YN ++ S+ + + L + +ML G PD +
Sbjct: 289 GAIDKARKIFDECVDKNLVLYNTIM------SNYVRQGLAREVLAVLGEMLKHGPRPDRI 342
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T + C++ D G +G V++ G+ V N++I+++M CG A +FD M
Sbjct: 343 TMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRM 402
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
N+ VSWN++I G++R+GD++ A +F M ++ SWN++I VQ +EA+ELF+
Sbjct: 403 LNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFR 462
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
MQS E + DK+T+ V SAC YLGA+D KW+HGY+++ + D+ +GTALVDM+
Sbjct: 463 VMQS----EGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMF 518
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
+CG + A VF +M K+D AWTA I A+ G G A + F EM +G++P+ V FV
Sbjct: 519 ARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFV 578
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
LL+A +H GLVE+G F M+ +Y + P HY CM+D+L RAGL SEA LI SM M
Sbjct: 579 ALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQM 638
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EP+ +WG+LL C++H NV++ A+ + +LDP +V L ++YA AGR+DDV K
Sbjct: 639 EPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKV 698
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFS 527
R +KE+G K +PG SS+E++G + EF+
Sbjct: 699 RLHLKEKGAHK-MPGSSSIEINGKIFEFT 726
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 228/476 (47%), Gaps = 70/476 (14%)
Query: 15 SPAKVSPPNKESTKLILRN------AIDECKNMRELKEIHTQIIKSPCLQTNDHHSL-IT 67
+P V+ PN+ K++ ++ + +CK M ELK++H+QI K+ +HH L +T
Sbjct: 14 TPTSVALPNQNELKILTKHRSSPTGSFKKCKTMTELKQLHSQITKNGL----NHHPLSLT 69
Query: 68 RLLFFCA-LSVSGSLSYATNVFSHIKRSD-----LYTYNIMIRA-NACKSSETNDTHSGK 120
L+ C + SL YA + Y ++ +IR +AC K
Sbjct: 70 NLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGY-------K 122
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
+ +++Q++C G PD TFPF+L CTK G V+G +VK G D+FV+NS+I
Sbjct: 123 AIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIH 182
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
+ CG + R +FD+MS R+VVSW ++I GY + G
Sbjct: 183 FYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCY--------------------- 221
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
+EA+ LF EM VE ++P+ +T+ V+SACA L + G+ V +
Sbjct: 222 ----------KEAVSLFFEM----VEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIG 267
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
L+ + ++ ALVDMY KCG +++A +F E K+ + + ++S + G +E
Sbjct: 268 ELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLA 327
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV--YHYAC--M 416
EM G RP+ +T + +SAC+ V G+WC H Y++ + + C +
Sbjct: 328 VLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWC-----HGYVLRNGLEGWDNVCNAI 382
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
I++ + G A R+ M + V W +L+ G +G++E K+ + D D
Sbjct: 383 INMYMKCGKQEMACRVFDRMLNKTRV-SWNSLIAGFVRNGDMESAWKIFSAMPDSD 437
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 120/277 (43%), Gaps = 53/277 (19%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G + A +FS + SDL ++N MI A ++ + ++L++ M GI+ D
Sbjct: 420 NGDMESAWKIFSAMPDSDLVSWNTMIGA------LVQESMFKEAIELFRVMQSEGITADK 473
Query: 138 LTFPFLLKECTKRLDGLVGA-----SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+T + C G +GA ++G + K + D+ + +++ +F CG SA
Sbjct: 474 VTMVGVASAC-----GYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAM 528
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+F++M RDV +W A I G
Sbjct: 529 QVFNKMVKRDVSAWTAA-------------------------------IGAMAMEGNGTG 557
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR-SGLDCDVVIG 311
A+ELF EM +++ +KPD + ++L+A ++ G ++ G + ++ G+ V
Sbjct: 558 AIELFDEM----LQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHY 613
Query: 312 TALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMIS 347
+VD+ G+ G + A + M + + + W ++++
Sbjct: 614 GCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLA 650
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 34/190 (17%)
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG-------- 393
++++I F+ G G +A FR++ G P++ TF +LSAC S + +G
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 394 -----RWCFV---------------MMRHVY--LVEPHVYHYACMIDILSRAGLFSEAER 431
R FV MR V+ + E +V + +I ++ G + EA
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 432 LIRSM---PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYA 487
L M + P+ ++ C +++LGE+V + +L+ +A VN L DMY
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYM 286
Query: 488 KAGRFDDVKK 497
K G D +K
Sbjct: 287 KCGAIDKARK 296
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/449 (38%), Positives = 274/449 (61%), Gaps = 12/449 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G++ A +F +L YN ++ S+ + + L + +ML G PD +
Sbjct: 281 GAIDAAKRLFDECVDRNLVLYNTIL------SNYARQGLAREALAILDEMLQQGPRPDRV 334
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T + + +D G +G V++ G+ + N +I ++M CG A +FD M
Sbjct: 335 TMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLM 394
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
SN+ VVSWN++ G++R+GD++ A ++F ++ +RN WN++I+G VQ +A+ELF+
Sbjct: 395 SNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFR 454
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ E +K D++T+ + SAC YLGA + KWVH Y+ ++G+ CD+ + TALVDM+
Sbjct: 455 EMQG----EGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMF 510
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
+CG + A VF +M ++D AWTA I A+ G G+ A F +M +GV+P+ V FV
Sbjct: 511 ARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFV 570
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+L+AC+H G VE+G F +M + + P + HY CM+D+L RAGL EA LI+SMPM
Sbjct: 571 QVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPM 629
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EP+ VWG+LL C++H NVE+ A+ + +L P +V L ++YA AG++ DV +
Sbjct: 630 EPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARV 689
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFS 527
R ++E+G+RK VPG SSV+V+GV+HEF+
Sbjct: 690 RLNLREKGVRK-VPGSSSVQVNGVIHEFT 717
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 151/529 (28%), Positives = 244/529 (46%), Gaps = 71/529 (13%)
Query: 18 KVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCA-LS 76
+ P K+S L ++ CK + +LK++H QI K+ Q S +T+L+ A ++
Sbjct: 18 EADPMTKDSC---LNESLRCCKTLNQLKQLHCQITKNGLDQIP---STLTKLVNAGAEIA 71
Query: 77 VSGSLSYATNVFSHIK---RSD--LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
SL YA F K RSD L+ N +IR + + + LY +ML
Sbjct: 72 SPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGL------GREAILLYVRMLVL 125
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
G++P+ TFPF+L CTK G V+G VVK G+ +DVF+QN +I + CG
Sbjct: 126 GVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGH---- 181
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
+D +F M +RN+ SW S+I G+ +G R +
Sbjct: 182 ---------------------------MDHGHKVFEGMSERNVVSWTSLICGYARGDRPK 214
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EA+ LF EM VE ++P +T+ V+SACA L +D G+ V Y+ GL + V+
Sbjct: 215 EAVSLFFEM----VEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMV 270
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
ALVDMY KCG ++ A +F E ++ + + ++S +A G +EA EM +G R
Sbjct: 271 NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPR 330
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY----ACMIDILSRAGLFS 427
P+ VT + +SA A + G+ C H Y++ + + +ID+ + G
Sbjct: 331 PDRVTMLSAISASAQLVDLFYGKVC-----HGYVIRNGLEGWDSIGNVIIDMYMKCGKPE 385
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
A R+ M V W +L G +G+VE +V + + N F+ +
Sbjct: 386 MACRVFDLMS-NKTVVSWNSLTAGFIRNGDVESAWEVFNQIPE---RNAVFWNTMISGLV 441
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVK 536
+ F+D + M+ GI+ + V + G+ G+P++ K
Sbjct: 442 QKSLFEDAIELFREMQGEGIKAD-----RVTMMGIASACGYLGAPELAK 485
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 307/594 (51%), Gaps = 90/594 (15%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
I+ C N+++LK+IH + I S T +IT+++ + L YAT VF+ +
Sbjct: 13 IETCTNIQQLKQIHAKSIISSLSYT---QFIITKII--NSFLSHACLDYATQVFNQTQEP 67
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM-LCTGISPDCLTFPFLLKECTKRLDG 153
D + YN MIRA + SS+T + +Y +M C I D T+PF+ K C +
Sbjct: 68 DGFIYNAMIRAYS--SSQTPCV----AISIYNKMRACQNILGDKYTYPFVFKACASQFAV 121
Query: 154 LVGASVYGQVVKFG----------------VC---------------DDVFVQNSVISLF 182
G V+G +V+ G VC DV N++I+ +
Sbjct: 122 EKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGY 181
Query: 183 MACGFVTSARMLFDEMSN----------------------------------------RD 202
G V + +F EM R+
Sbjct: 182 ARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLRE 241
Query: 203 VVSWNAMIIG-YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
V A +I Y++ G LD A LF + ++N WNS+I G+ Q G E +EL +EM
Sbjct: 242 GVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMH 301
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
S++ KPD+ T++ VLSACA +GA + G WVH + + G+ DV IGTAL+DMY KC
Sbjct: 302 LSNL----KPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKC 356
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + A VF +M +++ W A++S +A +G + A + F EM G RP+ +TF+ +L
Sbjct: 357 GFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVL 416
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
ACAHSGLVE G+ F +M Y + P V HY CM+D+L RAGL EA LI+ M +EP+
Sbjct: 417 HACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPN 476
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
V VWGALL C +HGN+E+GE A ++I L+ ++ YV L ++YA A RF+ VK R +
Sbjct: 477 VVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREM 536
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
M E+GI K GCS +E+ VVHEF + EE+ +L+ LSK +K G+
Sbjct: 537 MVEKGICKS-HGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDELSKKLKMAGY 589
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 5/186 (2%)
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T SVL+ I K +H S L I T +++ + C++ A VF +
Sbjct: 5 TPKSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQT 64
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEA-EGVRPNHVTFVGLLSACAHSGLVEKG 393
+ D + AMI ++ + A + +M A + + + T+ + ACA VEKG
Sbjct: 65 QEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKG 124
Query: 394 RWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
+ V++R Y E + + +++ G A+++ + DV W AL+ G
Sbjct: 125 KEVHGVIVRIGY--ELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAK-DVVFWNALITGY 181
Query: 453 QMHGNV 458
G V
Sbjct: 182 ARQGMV 187
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 193/521 (37%), Positives = 292/521 (56%), Gaps = 31/521 (5%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C R+L +H +++ L+ + L T+++ C + +++A VF+ ++ +L+
Sbjct: 24 CVTFRDLLRVHGHVVR---LRISQSSYLATQIVHLC--NAHRRVTHAARVFAQVRDPNLH 78
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP-------DCLTFPFLLKECTKR 150
+N MI+A A N H + +Y +ML SP D T+PFLLK C
Sbjct: 79 LHNAMIKAYA-----QNHQHR-DAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGT 132
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
+G V+ VV+ G VQNS+I ++ G + A +FDEM RDVVSWN +I
Sbjct: 133 AALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLI 192
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
+ R G + A LF M + I +W ++++G+ G A++ F+ MQ+ E
Sbjct: 193 SAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFE---- 248
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD ++I +VL ACA LGA++ G+W++ Y +R G+ I AL++MY KCGC+++A +
Sbjct: 249 PDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQL 308
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGL 389
F M KD ++W+ +I A +G EA F EME EG VRPN +TFVGLLSAC+++GL
Sbjct: 309 FDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGL 368
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V++G F M VY VEP V HY C++D+L R+G A L+R MP+ D VWG+LL
Sbjct: 369 VDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLL 428
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C+ HG+V+ A+ L++L+P + V L ++YA A R+ DV TR ++ R +RK
Sbjct: 429 SACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRK 488
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
PGCS +EV VV EF V E L L GL+ ++
Sbjct: 489 -TPGCSLIEVGNVVREF-------VAGEGLSSELGGLAGVL 521
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/425 (40%), Positives = 269/425 (63%), Gaps = 8/425 (1%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECTK-RLDGL-VGASVYGQVVKFGV-CDDVFVQNSVISL 181
+ +M G+ P+ +TF LL CT L+GL G S++ V K G+ ++V V +++ +
Sbjct: 77 FSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDM 136
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG + A ++FDEM R+ VSWN MI G +R+G++ A+ LF +M +R+ SW S+I
Sbjct: 137 YSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMI 196
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
GFV+ G +ALE F+EMQ + VE PD +TI SVL+ACA LGA+ G W++ ++ +
Sbjct: 197 GGFVKKGCFEQALEWFREMQLAGVE----PDYVTIISVLAACANLGALGLGLWINRFVMK 252
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
++ I +L+DMY +CGC+ A VF++MPK+ ++W +MI FALNG+ +EA +
Sbjct: 253 QDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEF 312
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F M EG RP+ V+F G L+AC+HSGLV++G F +M+ + P + HY C++D+ S
Sbjct: 313 FNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYS 372
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAG +A +I +MPM+P+ V G+LL C+ HG+V L E++ +YL ++DP + + YV
Sbjct: 373 RAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVL 432
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
L ++YA GR+D K R MK GI K+ PG SS+E+DG +HEF V + +
Sbjct: 433 LSNIYAAVGRWDGASKVRKKMKALGIHKK-PGFSSIEMDGSIHEFVAGDKTHVETQNIYA 491
Query: 542 ILNGL 546
+L+ L
Sbjct: 492 MLDHL 496
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL--VEK 392
P ++WT+ I++ NG EA F M+ GVRPNH+TF+ LLSAC L +
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRF 109
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G +R + L +V ++D+ S+ G A + M + V W ++ GC
Sbjct: 110 GGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSV-SWNTMIDGC 168
Query: 453 QMHGNVELGEKVAQY 467
+G E+GE + +
Sbjct: 169 MRNG--EVGEAIVLF 181
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 198/587 (33%), Positives = 324/587 (55%), Gaps = 59/587 (10%)
Query: 4 KLQMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHH 63
KLQ + S+ S VSP N +L +D+ +++ LK +H+++ L +++
Sbjct: 13 KLQALVSSIRKS--LVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFN---LSFHENP 67
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
SL +L+ A + G A NVF I ++ YN+MIR S N+ L
Sbjct: 68 SLGIKLMR--AYAARGEPGLARNVFDVIPERNVIFYNVMIR------SYMNNHLYDDALL 119
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
+++ M+ G SPD T+P +LK C+ + +G ++G V K G+ ++FV N +I+L+
Sbjct: 120 VFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYG 179
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM-------------- 229
CG + AR + DEM ++DVVSWN+M+ GY ++ D ALD+ R M
Sbjct: 180 KCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMAS 239
Query: 230 -----------------------KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
+K+++ SWN +I+ +++ ++++L+ +M VE
Sbjct: 240 LLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVE 299
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
PD IT ASVL AC L A+ G+ +H Y+ R L ++++ +L+DMY +CGC+E
Sbjct: 300 ----PDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLED 355
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A VF M +D +WT++IS + + G G A F EM+ G P+ + FV +LSAC+H
Sbjct: 356 AKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSH 415
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
SGL+ +G++ F M Y + P + H+AC++D+L R+G EA +I+ MPM+P+ VWG
Sbjct: 416 SGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWG 475
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALL C+++ N+++G A L+ L P +YV L ++YAKAGR+ +V R+LMK R
Sbjct: 476 ALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRR 535
Query: 507 IRKEVPGCSSVEVDGVVHEF----SMKGSPKVVKEELVLILNGLSKI 549
IRK +PG S+VE++ VH F + K + EEL +++ + ++
Sbjct: 536 IRK-MPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKEL 581
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 184/543 (33%), Positives = 311/543 (57%), Gaps = 23/543 (4%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
++PPN + +L N+ ++ E+H+ IIK L R SV
Sbjct: 106 IAPPNNFTFPFLL-NSCARLSSLEPGHEVHSHIIKH-----GFESDLFVRNALIHLYSVF 159
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G+L+ A +F DL +YN MI+ A E N S CL + +M +GI PD
Sbjct: 160 GNLNLARTLFDESLVRDLVSYNTMIKGYA----EVNQPESALCL--FGEMQNSGILPDEF 213
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVK--FGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
TF L C+ + VG ++ QV K + ++ ++++++ ++ CG + A +F
Sbjct: 214 TFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFS 273
Query: 197 EM-SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
M +++ +W++M+ GY R G+++VA LF M +R++ SW ++I+G+ Q G+ EALE
Sbjct: 274 TMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALE 333
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV-HGYLRRSGLDCDVVIGTAL 314
LF+EM++ + KPD++T+ +VLSACA LGA D GK + H Y+ + + ++ A+
Sbjct: 334 LFKEMEALGI----KPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAV 389
Query: 315 VDMYGKCGCVERAYGVFKEMPK--KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
+DMY KCG ++ A +F+ + K K + +MI+ A +G G+ A FRE+ + G++P
Sbjct: 390 MDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKP 449
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
+ VTFVG+L AC HSGL+E+G+ F M + Y ++P + HY CM+D+L R G EA L
Sbjct: 450 DEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDL 509
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
++ MP E + +W ALL C+ HGNV++GE Q L++++ + A YV L ++ A A ++
Sbjct: 510 VQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQW 569
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
++ ++ R +M++ GIRK PG S +E+ G +H F +E+ L+L ++ +K+
Sbjct: 570 EEARQVRKVMEDHGIRKP-PGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKS 628
Query: 553 GGF 555
G+
Sbjct: 629 AGY 631
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 150/529 (28%), Positives = 243/529 (45%), Gaps = 101/529 (19%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSL--ITRLL-FFCALSVSGSLSYATNVFSHI 91
++ CK+ ++ +IH Q I + HH + I+RL+ FF L L ++ +FS I
Sbjct: 16 LESCKSFKQGLQIHAQTIVNGL-----HHQIFSISRLISFFSLLGSKDGLDHSRLLFSQI 70
Query: 92 KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLLKECTKR 150
+L+ +N MIR + + + + LY M+ GI+ P+ TFPFLL C +
Sbjct: 71 DCPNLFMWNTMIRG------YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARL 124
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
G V+ ++K G D+FV+N++I L+ G + AR LFDE RD+VS+N MI
Sbjct: 125 SSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMI 184
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY + + AL LF EMQ+S +
Sbjct: 185 KGY-------------------------------AEVNQPESALCLFGEMQNSG----IL 209
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHG--YLRRSGLDCDVVIGTALVDMYGKCGCV---E 325
PD+ T ++ S C+ L + GK +H Y +D ++++ +A+VDMY KCG + E
Sbjct: 210 PDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAE 269
Query: 326 RAYG-----------------------------VFKEMPKKDTLAWTAMISVFALNGYGK 356
R + +F M ++D ++WTAMIS ++ G
Sbjct: 270 RVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCS 329
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY--- 413
EA + F+EMEA G++P+ VT V +LSACA G + G+ + H Y +E V++
Sbjct: 330 EALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLY----HQY-IENGVFNQNTI 384
Query: 414 --ACMIDILSRAGLFSEAERLIRSMPMEPDV-FVWGALLGGCQMHGNVELGEKVAQYLID 470
A ++D+ ++ G A + R + FV+ +++ G HG E V + LI
Sbjct: 385 LTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIS 444
Query: 471 --LDPLNHAFYVNLCDMYAKAGRFDDVKKT-RNLMKERGIRKEVP--GC 514
L P F LC +G ++ KK ++ GI+ ++ GC
Sbjct: 445 TGLKPDEVTFVGVLCAC-GHSGLIEEGKKLFESMFNAYGIKPQMEHYGC 492
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 174/391 (44%), Gaps = 49/391 (12%)
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
++K+ L S CL L+ C GL ++ Q + G+ +F + +IS F
Sbjct: 1 MWKRFLLENPSSLCL-----LESCKSFKQGL---QIHAQTIVNGLHHQIFSISRLISFFS 52
Query: 184 ACGF---VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
G + +R+LF ++ ++ WN MI GY RS +
Sbjct: 53 LLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDN---------------------- 90
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
REA+ L+ M + + P+ T +L++CA L +++ G VH ++
Sbjct: 91 ---------PREAIVLYMSMIAKGI---APPNNFTFPFLLNSCARLSSLEPGHEVHSHII 138
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
+ G + D+ + AL+ +Y G + A +F E +D +++ MI +A + A
Sbjct: 139 KHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALC 198
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDI 419
F EM+ G+ P+ TFV L S C+ G+ + +++ ++ ++ + ++D+
Sbjct: 199 LFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDM 258
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFY 479
++ GL + AER+ +M W +++ G G + + K+ ++ + D ++ +
Sbjct: 259 YAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVIS---W 315
Query: 480 VNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
+ Y++AG+ + + M+ GI+ +
Sbjct: 316 TAMISGYSQAGQCSEALELFKEMEALGIKPD 346
>gi|296088310|emb|CBI36755.3| unnamed protein product [Vitis vinifera]
Length = 751
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 199/550 (36%), Positives = 316/550 (57%), Gaps = 69/550 (12%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+++CK M ELK +H +I + +Q ++RL+ FCA S SG+L+YA +VF+ I R
Sbjct: 12 LEKCKTMAELKRLHGLMITTSVIQDV---IPLSRLVDFCAYSDSGNLNYAKSVFNQIDRP 68
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
LY +N MI+ + SE+ D + L +Y++M G +PD TFPF+LK C+
Sbjct: 69 SLYIWNSMIKGYSI--SESPD----EALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYN 122
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G V+ +VK G DV+ +++ ++ ACG + +A +FD++ +VV+W ++I G +
Sbjct: 123 LGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCI 182
Query: 215 -----------------------------------RSGDLD-----------VALDLFRR 228
RS DL+ + LD F+
Sbjct: 183 SNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQS 242
Query: 229 MKKRNIFSWNSIIT-----GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
N+ +I+ + Q G+A EAL+LF +M+ + + PDK T V+ AC
Sbjct: 243 NSNFNVILATAIVDMYAKCAYNQYGQANEALDLFSDMRIAGFD----PDKATFLCVIGAC 298
Query: 284 AYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWT 343
A+LGA+ G+ +H Y+ ++ L D IGTALVDMY K G ERA VF E+ KKD AWT
Sbjct: 299 AHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWT 358
Query: 344 AMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
++I A++G+G+EA F++M+ + + P+ +T++G+LSAC+H G VE G+ F+ M++
Sbjct: 359 SLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGKVEDGKNHFISMKN 418
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
V+ +EP HY CM+D+LSRAG EAERL+ MP+EP+ +W ALL GC+++ N+++ +
Sbjct: 419 VHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALLNGCKIYQNIDVAD 478
Query: 463 KVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE---V 519
+V + + +L+ YV L ++YA A R+++VK R LMKER I+K + G SSVE V
Sbjct: 479 RVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELMKERKIQKSL-GHSSVEMKMV 537
Query: 520 DGVVHEFSMK 529
G +H S++
Sbjct: 538 GGALHNVSVQ 547
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 306/612 (50%), Gaps = 92/612 (15%)
Query: 19 VSPPNKESTKLILRNAIDE---CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL 75
+ P S + +L I + C ++ ++K+IH Q++K+ N H A
Sbjct: 5 IRNPTWVSKRRLLEQKISDLHRCSSLNQVKQIHAQVLKA-----NLHRESFVGQKLIAAF 59
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S+ ++ A NVF+ I+ D+ YN +IRA+ S ++ +M +G+
Sbjct: 60 SLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPL------LAFSVFFEMQDSGVCA 113
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF-------- 187
D T+PFLLK C+ ++ V ++ QV K G C D+FV NS+I + CG
Sbjct: 114 DNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARK 173
Query: 188 -------------------------VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
+ AR LFDEM RD VSWN ++ GY+++G+++ A
Sbjct: 174 VFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAA 233
Query: 223 LDLFRRMKKRNIFSWNSI-------------------------------ITGFVQGGRAR 251
+LF +M RN+ SW+++ I+G+ + G A+
Sbjct: 234 FELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAK 293
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
+A+ L+ +M+ E +K D T+ S+LSACA G + GK VH + R+ C +
Sbjct: 294 DAINLYNQME----EAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVS 349
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
AL+DMY KCG +E A +F M +KD ++W A+I A++G+G++A F M+ EG
Sbjct: 350 NALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFV 409
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ VTFVG+L AC H+G V++G F M Y V P V HY CM+D+L R G EA R
Sbjct: 410 PDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFR 469
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
L+ SMP+EP+ +WG LLG C+MH L E+V L+ + + L ++YA AG
Sbjct: 470 LVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGD 529
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+D+ R MK I+K G SS+EVD VHEF++ + + ++GL
Sbjct: 530 WDNFANIRLRMKSTSIQKP-SGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGL----- 583
Query: 552 NGGFGQYIRGLS 563
GQ+I L+
Sbjct: 584 ----GQHINKLT 591
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 191/535 (35%), Positives = 294/535 (54%), Gaps = 61/535 (11%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+++CK+M +LK+IH+ IK + + R++ FC SG+++YA VF I
Sbjct: 14 LEKCKSMYQLKQIHSHTIK---MGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHP 70
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
++ +N MI+ + +H + +Y ML + I PD TFPF LK T+ +
Sbjct: 71 SMFIWNTMIKG------YSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQ 124
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G + VK G ++FVQ + I +F CG V A +FD +VV+WN M+ GY
Sbjct: 125 HGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYN 184
Query: 215 R-------------------------------------------SGDLDVALDLFRRMKK 231
R G++D A +F MK
Sbjct: 185 RVKQFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKT 244
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
R++ SW ++I G+++ AL LF+EMQ S+V KPD+ T+ S+L ACA LGA++
Sbjct: 245 RDVVSWTAMIDGYLRMNHFIGALALFREMQMSNV----KPDEFTMVSILIACALLGALEL 300
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
G+WV + ++ D +G ALVDMY KCG V +A VFKEM +KD WT MI A+
Sbjct: 301 GEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAI 360
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
NG+G+EA F M V P+ +T++G+L AC +V+KG+ F M + ++P V
Sbjct: 361 NGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVT 416
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
HY CM+D+L G EA +I +MP++P+ VWG+ LG C++H NV+L + A+ +++L
Sbjct: 417 HYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILEL 476
Query: 472 DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+P N A YV LC++YA + +++++ + R LM ERGI+K PGCS +E++G V+EF
Sbjct: 477 EPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKK-TPGCSLMELNGNVYEF 530
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 183/472 (38%), Positives = 275/472 (58%), Gaps = 29/472 (6%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF DL ++N +I N K + K +++YK M G+ PD +
Sbjct: 130 GEMENARKVFDESPVRDLVSWNCLI--NGYKKIGEGE----KAIEVYKVMESEGVKPDDV 183
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T L+ C D G Y V G+ + + N+++ +F CG + AR +FD +
Sbjct: 184 TMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNL 243
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
R +VS LF M+++++ WN++I G VQ R+++AL LFQ
Sbjct: 244 EKRTIVS------------------KLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQ 285
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ+S+ + PD+IT+ LSAC+ LGA+D G W+H Y+ + L +V +GT+LVDMY
Sbjct: 286 EMQTSNTD----PDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMY 341
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + A VF + +++L +TA+I AL+G A F EM G+ P+ +TF+
Sbjct: 342 AKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFI 401
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
GLLSAC H G+++ GR F M+ + + P + HY+ M+D+L RAGL EA++L+ SMPM
Sbjct: 402 GLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPM 461
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
E D VWGALL GC+MHGNV+LGEK A+ L++LDP + YV L MY +A ++D K+
Sbjct: 462 EADAAVWGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRA 521
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
R +M ERG+ K +PGCSS+EV+G+V EF ++ + E++ L+ L M
Sbjct: 522 RRMMNERGVEK-IPGCSSIEVNGIVSEFIVRDKSRPESEKIYDCLHCLGTHM 572
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 201/426 (47%), Gaps = 71/426 (16%)
Query: 67 TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYK 126
+RL+ FCALS S L+Y + I+ + +++N+ IR + +S D + YK
Sbjct: 14 SRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGFS-ESENPKDA-----VLAYK 67
Query: 127 QML---CTGISPDCLTFPFLLKECTK-RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
QML C PD T+P L K C RL+ L G + G V K + V N+ I +F
Sbjct: 68 QMLRRGCCESRPDHFTYPVLFKVCADLRLNSL-GHMILGHVFKLRLELVSHVHNASIHMF 126
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
+CG + +AR +FDE RD+VSWN +I GY + G+
Sbjct: 127 ASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGE------------------------ 162
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
+A+E+++ M+S E VKPD +T+ ++S+CA LG ++ GK + Y++ +
Sbjct: 163 -------GEKAIEVYKVMES----EGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKAN 211
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGV-------------FKEMPKKDTLAWTAMISVF 349
GL + + AL+DM+ KCG + A + F +M +KD + W AMI
Sbjct: 212 GLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGS 271
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
++A F+EM+ P+ +T + LSAC+ G ++ G W H Y +E H
Sbjct: 272 VQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWI-----HRY-IEKH 325
Query: 410 -----VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
V ++D+ ++ G SEA + + + + A++GG +HG+
Sbjct: 326 SLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTR-NSLTYTAIIGGLALHGDASTAISY 384
Query: 465 AQYLID 470
+ID
Sbjct: 385 FNEMID 390
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 193/496 (38%), Positives = 295/496 (59%), Gaps = 20/496 (4%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF-FCALSVSGSLSYAT 85
T L + + C M+ LK IH ++ HH+L+ +F F A+S +G L YA
Sbjct: 181 TSQSLASMAEACLTMQALKLIHALAFRANL----HHHALVLAKIFRFAAVSPNGCLHYAD 236
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
+FS I + + + YN +IR + SS + + ++L+ QM + PD TF FLLK
Sbjct: 237 RLFSQIHQPNTFFYNTLIRGYSKSSSPS------QSVQLFNQMRRNCVDPDGFTFTFLLK 290
Query: 146 ECTK-RLD-GLVGAS--VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
++ R+D L+ AS ++G V+K G C +FV N++I L+ A G +A +F+EM
Sbjct: 291 GRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGA 350
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
DVVSW+ +++ ++R+G+L++A +F M +R++ SW +++G+ Q R+REALELF+EM+
Sbjct: 351 DVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMR 410
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
V +PD++ + SV+SAC LG ++ G VH Y+ +G V + AL+DMY KC
Sbjct: 411 DVGV----RPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKC 466
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
GC++ A+ VF M +K + W +MIS A +G ++AF F M G+RP+ VTF+ LL
Sbjct: 467 GCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALL 526
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
+A H G V+ G F M+ Y VE V HY CM+D+L RAG EA +LI SM M +
Sbjct: 527 TAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCN 586
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
VWGALL C+++G+VE+GE+V + LI+L P +Y+ L D+Y AGR + + R
Sbjct: 587 DVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRA 646
Query: 502 MKERGIRKEVPGCSSV 517
M G +K + GCS V
Sbjct: 647 MDVNGAKKTL-GCSWV 661
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 136/339 (40%), Gaps = 63/339 (18%)
Query: 223 LDLFRR--MKKRNIFSWNSIITGFVQGGRAREALELFQEMQ------------------- 261
L+L R+ MK SW +++ + Q R+RE LELF+E++
Sbjct: 105 LELPRQVMMKYLGDVSWTVMVSMYAQAKRSREPLELFREIRDVRVRPTDVVTMGVDYDKY 164
Query: 262 -------SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
S+ V M+ P ++AS+ AC + A+ K +H R+ L ++ +
Sbjct: 165 KTLKSYISNKVMHML-PTSQSLASMAEACLTMQAL---KLIHALAFRANLHHHALVLAKI 220
Query: 315 VDMYG--KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
GC+ A +F ++ + +T + +I ++ + ++ F +M V P
Sbjct: 221 FRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDP 280
Query: 373 NHVTFVGLLSACAH--------------SGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
+ TF LL + G V K +CF H++ +I
Sbjct: 281 DGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCF-----------HLFVMNALIH 329
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+ + G+ + A ++ M + DV W L+ G +EL +V + + D ++
Sbjct: 330 LYAARGVPAAAHQVFNEM-VGADVVSWSGLVVAHVRAGELELARQVFYEMPERDVVS--- 385
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
+ + YA+A R + + M++ G+R + SV
Sbjct: 386 WTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSV 424
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 298/534 (55%), Gaps = 15/534 (2%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
V+ + + + + + +CK +REL+ IH I + H ++ +F C
Sbjct: 5 VASRGRYMNRSVCHHLLAQCKKLRELQRIHALAIAHG---LHPHQQSVSCKIFRCYADF- 60
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G ++ A +F I DL ++ ++ S + + + L+ +++ G PD
Sbjct: 61 GRVADARKLFDEIPNPDLISFTSLM------SLHLQLDNQREAISLFARVVAAGHRPDGF 114
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
L + D +VG +V+G + + G+ +V V N++I ++ CG SA +FD M
Sbjct: 115 AVVGALSASSGAGDQVVGRAVHGLIFRLGLDGEVVVGNALIDMYSQCGKFESAVKVFDRM 174
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
S +D V+W +M+ GY++ +D AL F ++ R++ +W ++ITG VQG + ALELF
Sbjct: 175 SLKDEVTWGSMLHGYIKCAGVDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFG 234
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M V E +P +TI VLSACA +GA+D G+ +HGY + ++++ AL+DMY
Sbjct: 235 RM----VLEGHRPTHVTIVGVLSACADIGALDLGRVIHGYGSKCNASLNIIVSNALMDMY 290
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
K G +E A+ VF+E+ KD+ WT MIS + G GK+A + F++M GV PN VTFV
Sbjct: 291 AKSGHIEMAFSVFQEVQSKDSFTWTTMISCCTVQGDGKKALELFQDMLRAGVVPNSVTFV 350
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+LSAC+HSGL+E+G F MR +Y ++P + HY CMID+L R GL EAE LI M +
Sbjct: 351 SVLSACSHSGLIEEGIELFDRMRQLYKIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNV 410
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EPD+ +W +LL C + GN L E + ++ +P + YV L +MYA + ++ + ++
Sbjct: 411 EPDIVIWRSLLSACLVRGNNRLAEIAGKEIVKREPGDDGVYVLLWNMYASSNKWREAREM 470
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
R M I K+ PGCS +E+DG VHEF ++ + E+ L +S+ +K
Sbjct: 471 RQQMLSLKIFKK-PGCSWIEIDGAVHEFLVEDKTHDARREIYETLEYMSRQLKT 523
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 292/543 (53%), Gaps = 72/543 (13%)
Query: 30 ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
+L A++ KN+ EL ++ +Q+I S Q H L S S + AT +F
Sbjct: 9 VLFAALESWKNLHELNQVLSQLIVSGLSQ----HPLFATSAIKKLCSHSVTFPRATFLFD 64
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYK-QMLCTGISPDCLTFPFLLKECT 148
H+ D + N +IRA A K L+ Y +ML + P+ TFP L+K CT
Sbjct: 65 HLHHPDAFHCNTIIRAYARKPDFP------AALRFYYCKMLARSVPPNHYTFPLLIKVCT 118
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE----------- 197
G + ++VKFG D+F +NS+I ++ G + +ARM+FDE
Sbjct: 119 DIGSFREGLKGHARIVKFGFGSDLFARNSLIRMYSVFGRIGNARMVFDESCWLDLVSYNS 178
Query: 198 --------------------MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
M +RDV+SWN +I GY+ GDLD A +LF + +R+ SW
Sbjct: 179 MIDGYVKNGEIGAARKVFNEMPDRDVLSWNCLIAGYVGVGDLDAANELFETIPERDAVSW 238
Query: 238 NSIITGFVQGGRAREALELFQEMQSS-----------SVEEMVK---------------- 270
N +I G + G A++ F M ++ ++ VK
Sbjct: 239 NCMIDGCARVGNVSLAVKFFDRMPAAVRNVVSWNSVLALHARVKNYGECLMLFGKMVEGR 298
Query: 271 ---PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
P++ T+ SVL+ACA LG + G WVH ++R + + DV++ T L+ MY KCG ++ A
Sbjct: 299 EAVPNEATLVSVLTACANLGKLSMGMWVHSFIRSNNIKPDVLLLTCLLTMYAKCGAMDLA 358
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
GVF EMP + ++W +MI + L+G G +A + F EME G +PN TF+ +LSAC H+
Sbjct: 359 KGVFDEMPVRSVVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLSACTHA 418
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
G+V +G W F +M+ VY +EP V HY CM+D+L+RAGL +E LIR +P++ +WGA
Sbjct: 419 GMVMEGWWYFDLMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVKAGSAIWGA 478
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
LL GC H + ELGE VA+ I+L+P + Y+ L +MYA GR+DDV+ R ++KE+G+
Sbjct: 479 LLSGCSNHLDSELGEIVAKRFIELEPQDIGPYILLSNMYAAKGRWDDVEHVRLMIKEKGL 538
Query: 508 RKE 510
+KE
Sbjct: 539 QKE 541
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 136/356 (38%), Gaps = 46/356 (12%)
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLF-----RRMKKRNIFSWNSIITGFV 245
A LFD + + D N +I Y R D AL + R N +++ +I
Sbjct: 59 ATFLFDHLHHPDAFHCNTIIRAYARKPDFPAALRFYYCKMLARSVPPNHYTFPLLIKVCT 118
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
G RE L+ + V+ D S++ + G I + + V
Sbjct: 119 DIGSFREGLK----GHARIVKFGFGSDLFARNSLIRMYSVFGRIGNARMVFD----ESCW 170
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG---YGKEAFDTF 362
D+V +++D Y K G + A VF EMP +D L+W +I+ + G E F+T
Sbjct: 171 LDLVSYNSMIDGYVKNGEIGAARKVFNEMPDRDVLSWNCLIAGYVGVGDLDAANELFETI 230
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
E +A V++ ++ CA G V F M +V + ++ + +R
Sbjct: 231 PERDA-------VSWNCMIDGCARVGNVSLAVKFFDRMPAAV---RNVVSWNSVLALHAR 280
Query: 423 AGLFSEA----ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL----IDLDPL 474
+ E +++ P+ ++L C G + +G V ++ I D L
Sbjct: 281 VKNYGECLMLFGKMVEGREAVPNEATLVSVLTACANLGKLSMGMWVHSFIRSNNIKPDVL 340
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
L MYAK G D K G+ E+P S V + ++ + + G
Sbjct: 341 ---LLTCLLTMYAKCGAMDLAK---------GVFDEMPVRSVVSWNSMIMGYGLHG 384
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 303/532 (56%), Gaps = 24/532 (4%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVSG 79
P++++ +L+ K + E+K+IH + L ++ +SLI R + +G
Sbjct: 128 PDRQTFLYLLQTT----KFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYV------DNG 177
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
A +F + ++ +YN MI A + L+L+ M G+ PD T
Sbjct: 178 CFECARQLFDEMSDRNVVSYNTMILGFAKVGNILG------ILELFHDMRSHGLEPDDFT 231
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
LL C + + +G SV+ Q+ K ++ + N+++ +++ C + AR +FD
Sbjct: 232 MLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPM 291
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+D VSWN +I GY + G+L++A DLF ++ R+I SWNS+I+G+ Q G LF
Sbjct: 292 EKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTR 351
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M E VKPDK+TI +++SA A +GA+D G+W+HG + + G+AL+DMY
Sbjct: 352 M----FAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYC 407
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG +ERA+ +F ++P+KD WT MI+ FA +G+G +A + F M+AE +PN VTFV
Sbjct: 408 KCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAE-TKPNDVTFVS 466
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+L+AC+HSGLV++G F M+ Y +EP V HY C++D+L R+G +A +I MPME
Sbjct: 467 VLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPME 526
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
P +WGA+L C+MH N+EL E+ L+ L+P Y+ L ++YA GR+ R
Sbjct: 527 PSRSIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIR 586
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+M RG++K + GCSSV VDG+VH+F+ ++ IL+ L+ M+
Sbjct: 587 EVMNSRGVKK-IAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMR 637
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 231/509 (45%), Gaps = 94/509 (18%)
Query: 35 IDECKNMRELKEIHTQIIKSPCL-QTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR 93
+++C + + K+I ++++ + QT ++RLLFF A+S +L A +F+H
Sbjct: 38 LEKCNSRTQFKQILGHMMRNNLVGQTFP----MSRLLFFSAVSHPENLELAILLFNHFTP 93
Query: 94 -SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
+LY +N MI + K +Y+ ML G PD TF +LL+ T +
Sbjct: 94 YPNLYIFNTMILGFPFSNE--------KAFTIYRSMLQNGTYPDRQTFLYLLQ--TTKFV 143
Query: 153 GLVGASVYGQVVKFGVCD-DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
V ++ + FG+ + +++NS+I ++ G AR LFDEMS+R+VVS+N MI+
Sbjct: 144 AEV-KQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMIL 202
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
G+ + G+ I G LELF +M+S +E P
Sbjct: 203 GFAKVGN----------------------ILGI---------LELFHDMRSHGLE----P 227
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC---------- 321
D T+ +L C LG GK VH + +S ++++ AL+DMY KC
Sbjct: 228 DDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVF 287
Query: 322 ---------------------GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
G +E A +F ++P +D ++W ++IS +A NG
Sbjct: 288 DGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKC 347
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F M AE V+P+ VT V L+SA A G +++GRW + + L + + + +ID+
Sbjct: 348 LFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKM-LTKIEAFSGSALIDMY 406
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL----IDLDPLNH 476
+ G A + +P E DV W ++ G HG G K + + P N
Sbjct: 407 CKCGSIERAFVIFNQIP-EKDVTTWTTMITGFAFHG---FGNKALELFSVMQAETKP-ND 461
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
+V++ + +G D+ K + MK+R
Sbjct: 462 VTFVSVLAACSHSGLVDEGLKIFSSMKKR 490
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 303/532 (56%), Gaps = 24/532 (4%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVSG 79
P++++ +L+ K + E+K+IH + L ++ +SLI R + +G
Sbjct: 63 PDRQTFLYLLQTT----KFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYV------DNG 112
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
A +F + ++ +YN MI A + L+L+ M G+ PD T
Sbjct: 113 CFECARQLFDEMSDRNVVSYNTMILGFAKVGNILG------ILELFHDMRSHGLEPDDFT 166
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
LL C + + +G SV+ Q+ K ++ + N+++ +++ C + AR +FD
Sbjct: 167 MLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPM 226
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+D VSWN +I GY + G+L++A DLF ++ R+I SWNS+I+G+ Q G LF
Sbjct: 227 EKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTR 286
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M E VKPDK+TI +++SA A +GA+D G+W+HG + + G+AL+DMY
Sbjct: 287 M----FAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYC 342
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG +ERA+ +F ++P+KD WT MI+ FA +G+G +A + F M+AE +PN VTFV
Sbjct: 343 KCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAE-TKPNDVTFVS 401
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+L+AC+HSGLV++G F M+ Y +EP V HY C++D+L R+G +A +I MPME
Sbjct: 402 VLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPME 461
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
P +WGA+L C+MH N+EL E+ L+ L+P Y+ L ++YA GR+ R
Sbjct: 462 PSRSIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIR 521
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+M RG++K + GCSSV VDG+VH+F+ ++ IL+ L+ M+
Sbjct: 522 EVMNSRGVKK-IAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMR 572
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 215/477 (45%), Gaps = 89/477 (18%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIK-RSDLYTYNIMIRANACKSSETNDTHSGKCLKL 124
++RLLFF A+S +L A +F+H +LY +N MI + K +
Sbjct: 1 MSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFPFSNE--------KAFTI 52
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCD-DVFVQNSVISLFM 183
Y+ ML G PD TF +LL+ T + V ++ + FG+ + +++NS+I ++
Sbjct: 53 YRSMLQNGTYPDRQTFLYLLQ--TTKFVAEV-KQIHCHALVFGLLSKEEYLRNSLIKRYV 109
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
G AR LFDEMS+R+VVS+N MI+G+ + G+ I G
Sbjct: 110 DNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGN----------------------ILG 147
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
LELF +M+S +E PD T+ +L C LG GK VH + +S
Sbjct: 148 I---------LELFHDMRSHGLE----PDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSI 194
Query: 304 LDCDVVIGTALVDMYGKC-------------------------------GCVERAYGVFK 332
++++ AL+DMY KC G +E A +F
Sbjct: 195 GSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFN 254
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
++P +D ++W ++IS +A NG F M AE V+P+ VT V L+SA A G +++
Sbjct: 255 QIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQ 314
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
GRW + + L + + + +ID+ + G A + +P E DV W ++ G
Sbjct: 315 GRWIHGLAVKM-LTKIEAFSGSALIDMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGF 372
Query: 453 QMHGNVELGEKVAQYL----IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
HG G K + + P N +V++ + +G D+ K + MK+R
Sbjct: 373 AFHG---FGNKALELFSVMQAETKP-NDVTFVSVLAACSHSGLVDEGLKIFSSMKKR 425
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 304/534 (56%), Gaps = 16/534 (2%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PNK + +++ A E ++ + +H +KS + L C S G L
Sbjct: 129 PNKYTFPFLIK-AAAEVSSLSLGQSLHGMAVKSAV----GSDVFVANSLIHCYFSC-GDL 182
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A VF+ IK D+ ++N MI K S K L+L+K+M + +T
Sbjct: 183 DSACKVFTTIKEKDVVSWNSMINGFVQKGS------PDKALELFKKMESEDVKASHVTMV 236
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
+L C K + G V + + V ++ + N+++ ++ CG + A+ LFD M +
Sbjct: 237 GVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 296
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
D V+W M+ GY S D + A ++ M +++I +WN++I+ + Q G+ EAL +F E+Q
Sbjct: 297 DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQ 356
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
+++ +K ++IT+ S LSACA +GA++ G+W+H Y+++ G+ + + +AL+ MY KC
Sbjct: 357 ---LQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKC 413
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G +E++ VF + K+D W+AMI A++G G EA D F +M+ V+PN VTF +
Sbjct: 414 GDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVF 473
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
AC+H+GLV++ F M Y + P HYAC++D+L R+G +A + I +MP+ P
Sbjct: 474 CACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPS 533
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
VWGALLG C++H N+ L E L++L+P N +V L ++YAK G++++V + R
Sbjct: 534 TSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKH 593
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
M+ G++KE PGCSS+E+DG++HEF + + E++ L+ + + +K+ G+
Sbjct: 594 MRVTGLKKE-PGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 646
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 235/488 (48%), Gaps = 82/488 (16%)
Query: 2 SKKLQMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTND 61
++ L + + ++P + + N+ S + L I+ C ++R+LK+ H +I++ +D
Sbjct: 7 AQPLSLPRHPNFSNPNQPTTNNERSRHISL---IERCVSLRQLKQTHGHMIRTGTF--SD 61
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
+S ++L ALS SL YA VF I + + + +N +IRA A +
Sbjct: 62 PYS-ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWA--F 118
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L + + C P+ TFPFL+K + +G S++G VK V DVFV NS+I
Sbjct: 119 LDMVSESQCY---PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHC 175
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ +CG + SA +F + +DVVSWN+MI G+++ G D AL+LF++M+
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES---------- 225
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
E VK +T+ VLSACA + ++ G+ V Y+
Sbjct: 226 -------------------------EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE 260
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVF------------------------------ 331
+ ++ ++ + A++DMY KCG +E A +F
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 332 -KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGL 389
MP+KD +AW A+IS + NG EA F E++ + ++ N +T V LSACA G
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 390 VEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+E GRW + +H + HV + +I + S+ G ++ + S+ + DVFVW A+
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHV--TSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAM 437
Query: 449 LGGCQMHG 456
+GG MHG
Sbjct: 438 IGGLAMHG 445
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 5/256 (1%)
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
L+ A +F + K N F+WN++I + G ++ F +M S E P+K T
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVS---ESQCYPNKYTF 134
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
++ A A + ++ G+ +HG +S + DV + +L+ Y CG ++ A VF + +
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 194
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD ++W +MI+ F G +A + F++ME+E V+ +HVT VG+LSACA +E GR
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ V ++ M+D+ ++ G +A+RL +M E D W +L G +
Sbjct: 255 CSYIEE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISE 312
Query: 457 NVELGEKVAQYLIDLD 472
+ E +V + D
Sbjct: 313 DYEAAREVLNSMPQKD 328
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 184/489 (37%), Positives = 286/489 (58%), Gaps = 15/489 (3%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
N++ LK+ H +I + + N + F A S +G L YA +VF+H + Y +
Sbjct: 27 NLKTLKQSHCFMIITGLNRDN-----LNVAKFIEACSNAGHLRYAYSVFTHQPFPNTYLH 81
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
N MIRA + + HS + +Y++ PD TFPF+LK + D G V
Sbjct: 82 NTMIRA--LSLVDERNAHS-IAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQV 138
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+GQ V FG V V +I ++ +CG + AR +FDEM RDV WNA++ GY + G++
Sbjct: 139 HGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEM 198
Query: 220 DVALDLFRRMK--KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
D A L M RN SW +I+G+ + GRA EA+E+FQ M + E V PD++T+
Sbjct: 199 DEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRM----LMENVDPDEVTLL 254
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
+VLSACA LG+++ G+ + Y+ G++ V + A++DMY K G + +A VF+ + ++
Sbjct: 255 AVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNER 314
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+ + WT +I+ A +G+G EA F M GV+PN VTF+ +LSAC+H G V+ G F
Sbjct: 315 NVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFF 374
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
MR Y + P++ HY CMID+L RAG EAE +I+SMP E + +WG+LL +H +
Sbjct: 375 NSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHHD 434
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
+++GE+ LI L+P N Y+ L ++Y+ GR+D+ + R +MK G++K + G SS+
Sbjct: 435 IDVGERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVKK-LAGESSI 493
Query: 518 EVDGVVHEF 526
EV+ V++F
Sbjct: 494 EVENRVYKF 502
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 256/422 (60%), Gaps = 5/422 (1%)
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D TFPF+LK + L +G V+G +++ G+ D++V S+I L+ CG + A +F
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 192
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D M+ RDV SWNA++ GY +SG +D AL +F RM RNI SW ++I+G+ Q G A++AL
Sbjct: 193 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 252
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
LF EM + V+P+ +TI SVL ACA L ++ G+ +H R GL+ + + AL
Sbjct: 253 LFDEMVKE--DSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALT 310
Query: 316 DMYGKCGCVERAYGVFKEMPK--KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
MY KCG + A F ++ + K+ +AW MI+ +A G+G +A TFREM G++P+
Sbjct: 311 AMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPD 370
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
+TF GLLS C+HSGLV+ G F M Y + P V HYAC+ D+L RAG +EA +L+
Sbjct: 371 DITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLV 430
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
MPM +WG+LL C+ H N+E+ E A+ L L+P N YV L +MYA+AGR+
Sbjct: 431 GEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQ 490
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNG 553
+V K R ++K +G +K PGCS +E++G H F + +E+ + L L + MK
Sbjct: 491 EVDKLRAIVKSQGTKKS-PGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAA 549
Query: 554 GF 555
G+
Sbjct: 550 GY 551
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 112/263 (42%), Gaps = 46/263 (17%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC--TGISP 135
SG + A +F + ++ ++ MI S + + + L L+ +M+ +G+ P
Sbjct: 213 SGCIDAALAIFERMPWRNIVSWTTMI------SGYSQSGLAQQALSLFDEMVKEDSGVRP 266
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
+ +T +L C + G ++ + G+ + V ++ +++ CG + AR F
Sbjct: 267 NWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCF 326
Query: 196 DEM--SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
D++ + +++++WN MI T + G +A
Sbjct: 327 DKLNRNEKNLIAWNTMI-------------------------------TAYASYGHGLQA 355
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGT 312
+ F+EM ++ ++PD IT +LS C++ G +D G K+ + ++ V
Sbjct: 356 VSTFREM----IQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYA 411
Query: 313 ALVDMYGKCGCVERAYGVFKEMP 335
+ D+ G+ G + A + EMP
Sbjct: 412 CVADLLGRAGRLAEASKLVGEMP 434
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 192/521 (36%), Positives = 291/521 (55%), Gaps = 31/521 (5%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C R+L +H +++ L+ + L T+++ C + +++A VF+ ++ +L+
Sbjct: 24 CVTFRDLLRVHGHVVR---LRISQSSYLATQIVHLC--NAHRRVTHAARVFAQVRDPNLH 78
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP-------DCLTFPFLLKECTKR 150
+N MI+A A N H + +Y +ML SP D T+PFLLK C
Sbjct: 79 LHNAMIKAYA-----QNHQHR-DAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGT 132
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
+G V+ VV+ G VQNS+I ++ G + A +FDEM RDVVSWN +I
Sbjct: 133 AALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLI 192
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
+ R G + A LF M + I +W ++++G+ G A++ F+ MQ+ E
Sbjct: 193 SAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFE---- 248
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD ++I +VL ACA LG ++ G+W++ Y +R G+ I AL++MY KCGC+++A +
Sbjct: 249 PDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQL 308
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGL 389
F M KD ++W+ +I A +G EA F EME EG VRPN +TFVGLLSAC+++GL
Sbjct: 309 FDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGL 368
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V++G F M VY VEP V HY C++D+L R+G A L+R MP+ D VWG+LL
Sbjct: 369 VDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLL 428
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C+ HG+V+ A+ L++L+P + V L ++YA A R+ DV TR ++ R +RK
Sbjct: 429 SACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRK 488
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
PGCS +EV VV EF V E L L GL+ ++
Sbjct: 489 -TPGCSLIEVGNVVREF-------VAGEGLSSELGGLAGVL 521
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/477 (38%), Positives = 270/477 (56%), Gaps = 18/477 (3%)
Query: 43 ELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIM 102
+L+EIH ++ Q N +++ + C ++YA +F + + +N M
Sbjct: 24 QLREIHAHFLRHGLNQLN---QILSHFVSICG--SLNKMAYANRIFKQTQNPTIILFNAM 78
Query: 103 IRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
I+ + + +L+ M GI PD T LLK C+ +G ++ +
Sbjct: 79 IKGYSLNGPFE------ESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHKE 132
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
V+ G ++ VI L+ +CG + A +FDEM RDV+ WN MI G+ + GD+D+
Sbjct: 133 VLVVGFEGFSAIRIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCKRGDVDMG 192
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
L LFR+M+KR++ SWN +I+ Q R EAL LF +M ++ KPD+ T+ +VL
Sbjct: 193 LCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDM----LDWGFKPDEATVVTVLPI 248
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCD-VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
CA LG++D GKW+H Y + SGL D V +G ALVD Y K G E A VF EMP+K+ ++
Sbjct: 249 CARLGSVDVGKWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRKNVIS 308
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
W +IS ALNG G+ + EM EGVRPN TFVG+LS CAH+GL E+GR M
Sbjct: 309 WNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLASMV 368
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP-MEPDVFVWGALLGGCQMHGNVEL 460
+ +EP + HY CM+D+L R+G EA LIR MP P+ +WG+LL C+ HG+VEL
Sbjct: 369 EHHQIEPKLEHYGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGDVEL 428
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
+ LIDL+P N YV L +MYA+ R+D V R +M+E+ ++K PG S +
Sbjct: 429 AHLAVKELIDLEPWNSGNYVLLSNMYAEEERWDKVANVRGMMREKNVKK-TPGQSVI 484
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/457 (37%), Positives = 281/457 (61%), Gaps = 13/457 (2%)
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
MI+A+A + ++++ ++++ M+ +G P+ TF F+ K C L L G +
Sbjct: 1 MIKAHAVIPTSSHNS-----MRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIR 55
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+K G+ ++FV N++I ++ G V AR +FD ++D+ SWN MI GY+ SG++
Sbjct: 56 VHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIG 115
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A ++F M +R++ SW +II G+VQ G +EAL+LF EM + P++ T+AS L
Sbjct: 116 RAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGP----PPNEFTLASAL 171
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP--KKD 338
+ACA L A+D G+W+H Y+ +S + + + +L+DMY KCG ++ A VF + K
Sbjct: 172 AACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK 231
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
W AMI +A++G KEA D F +M+ E V PN VTFV LL+AC+H LVE+GR F
Sbjct: 232 VWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFK 291
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
M Y +EP + HY CM+D+L R+GL EAE + +MPM PD +WGALLG C++H ++
Sbjct: 292 SMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDI 351
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
E G+++ + + +LD + +V L ++Y+ +G++D+ K R ++ G RK+ PGCSS+E
Sbjct: 352 ERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSG-RKKTPGCSSIE 410
Query: 519 VDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++GV H+F + ++L L L+ ++ +KN G+
Sbjct: 411 LNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGY 447
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 118/300 (39%), Gaps = 70/300 (23%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMI-----RANACKSSETNDTHSGK------------- 120
G + A VF DLY++NIMI ++ E D S +
Sbjct: 81 GLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYV 140
Query: 121 -------CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF 173
L L+ +ML TG P+ T L C + G ++ + K + +
Sbjct: 141 QVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNER 200
Query: 174 VQNSVISLFMACGFVT-SARMLFDEMSNR-DVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
+ S++ ++ CG + +A++ DE + V WNAMI GY G A+DLF +MK
Sbjct: 201 LLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKV 260
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
E V P+K+T ++L+AC++ ++
Sbjct: 261 -----------------------------------EKVSPNKVTFVALLNACSHGKLVEE 285
Query: 292 GKWVHGYLR----RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
G+ GY + G++ ++ +VD+ G+ G ++ A MP D W A++
Sbjct: 286 GR---GYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALL 342
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/558 (35%), Positives = 303/558 (54%), Gaps = 55/558 (9%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFF-CALSVSGSLSYATNVFSHIKR 93
I + +L +IH QI + ++T+L+ C+L SL YA ++F
Sbjct: 47 IHASNTLPQLHQIHAQIFLHNLFSNS---RVVTQLISSSCSLK---SLDYALSIFRCFDH 100
Query: 94 SDLYTYNIMIRANACKSS-ETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
+L+ +N +IR A S E + +H + ML I PD LT PF+LK +D
Sbjct: 101 PNLFVFNALIRGLAENSRFEGSVSH-------FVLMLRLSIRPDRLTLPFVLKSVAALVD 153
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE--------------- 197
+G ++G V+K G+ D FV+ S++ +++ G + LFDE
Sbjct: 154 VGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNV 213
Query: 198 --------------------MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
M R+ SWN++I G++R+GDLD A +LF +M ++N+ SW
Sbjct: 214 LINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSW 273
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
++I GF Q G +AL +F M +EE V+P+ +T+ S L AC +GA+ G+ +H
Sbjct: 274 TTMINGFSQNGDHEKALSMFWRM----LEEGVRPNDLTVVSALLACTKIGALQVGERIHN 329
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
YL +G + IGTALVDMY KCG ++ A VF E KD L W+ MI +A++G +
Sbjct: 330 YLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQ 389
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
A F +M++ G+ P+ V F+ +L+AC+HSG V++G F MR Y +EP + HY ++
Sbjct: 390 ALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIV 449
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L RAG EA I+SMP+ PD +WGAL C+ H N+E+ E A+ L+ L+P +
Sbjct: 450 DLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPG 509
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKE 537
YV L ++YA GR++DV++ R LMK RG+ K+ PG S +EV+G VH F V E
Sbjct: 510 SYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKD-PGWSYIEVEGQVHSFVAGDHAHVRAE 568
Query: 538 ELVLILNGLSKIMKNGGF 555
E+ L L ++ K G+
Sbjct: 569 EISLKLEEITASAKQEGY 586
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 295/522 (56%), Gaps = 15/522 (2%)
Query: 30 ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
+ + + +CK +REL+ IH Q + + L N S+ ++ F + + G + A +F
Sbjct: 22 VCHHLLTQCKTIRELQRIHAQAL-THGLHPN-QQSISCKI--FRSYAEFGRPADAGRLFD 77
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
I D+ ++ ++ S H K + ++ + +G PD L
Sbjct: 78 EIPHPDIISFTSLM------SLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGG 131
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
D +G+ V+G + + G+ ++ V N+++ ++ CG AR +FD M +D V+W +M
Sbjct: 132 LGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSM 191
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
+ GY++ +D AL F +M ++ SW ++ITG VQ + +ALELF +M + E
Sbjct: 192 LYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKM----LLEGH 247
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
+P+ ITI VLSACA +GA+D G+ +HGY +S ++++ AL+DMY K G + A+
Sbjct: 248 RPNHITIVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFS 307
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF+E+ KD WT MIS F + G G++A + F +M G+ PN VTFV +LSAC+H+GL
Sbjct: 308 VFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGL 367
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
+++GR F MR VY ++P + HY CM+D+L R GL EAE LI M +EPD+ +W +LL
Sbjct: 368 IQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLL 427
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C HGN L E + +I +P + YV L +MYA + R+ + R M R I K
Sbjct: 428 SACLAHGNDRLAEIAGKEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYK 487
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+ PGCS +EVDGVVHEF ++ + E+ + L +++ +K
Sbjct: 488 K-PGCSWIEVDGVVHEFLVEDKSHDARREIYVTLEIMARHLK 528
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 307/558 (55%), Gaps = 52/558 (9%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+D+ +++ LK++H++I C+ + H + + A +V G ++F I +
Sbjct: 1034 LDKNPDIKYLKKLHSKI----CIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKK 1089
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
++ +N+MIR S N+ L ++K M GI PD T+P +LK + D
Sbjct: 1090 NVVFFNVMIR------SYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLW 1143
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
VG ++ VV+ G+ +VFV N +IS++ CG + A + DZM RDVVSWN+++ G
Sbjct: 1144 VGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCA 1203
Query: 215 RSGDLDVALD-------------------------------------LFRRMKKRNIFSW 237
R+G D AL+ +F ++ +++ SW
Sbjct: 1204 RNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSW 1263
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N +I ++ EA+++F +M+ +V+ PD I+IASVL AC L A+ G+ +H
Sbjct: 1264 NVMIAVYMNNSMPAEAVDIFLQMEDHAVD----PDAISIASVLPACGDLSALLLGRRIHE 1319
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
Y+ R L ++++ AL+DMY KCGC+E A VF +M +D ++WT+MIS + +NG G++
Sbjct: 1320 YVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRD 1379
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
A F M+ G+ P+ + FV +LSAC+H+GL+++GR+ F +M + P + H+ CM+
Sbjct: 1380 AVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMV 1439
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L RAG EA I+ MPMEP+ VWGALL C+++ N+ +G A L L P
Sbjct: 1440 DLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSG 1499
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKE 537
+YV L ++YAKAGR++DV R++MK +GI+K +PG S+ E+D VH F +
Sbjct: 1500 YYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKK-MPGVSNFELDNRVHTFLAGDQSHPQSK 1558
Query: 538 ELVLILNGLSKIMKNGGF 555
++ L+ L MK G+
Sbjct: 1559 QIYEELDVLVGKMKEAGY 1576
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/477 (39%), Positives = 271/477 (56%), Gaps = 43/477 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GSL A VF I + ++ +N MI A N L ++ +L GI P+
Sbjct: 462 GSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDN------ALATFQALLKEGIKPNSS 515
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +L C +G V+ ++K G+ D+ V N+++S+F+ CG
Sbjct: 516 TFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCG------------ 563
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
DL A +LF M KR++ SWN+II GFVQ G+ + A + F+
Sbjct: 564 -------------------DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK 604
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
MQ S + KPDKIT +L+ACA A+ G+ +H + + DCDV++GT L+ MY
Sbjct: 605 MMQESGI----KPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMY 660
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG +E A+ VF ++PKK+ +WT+MI+ +A +G GKEA + F +M+ EGV+P+ +TFV
Sbjct: 661 TKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFV 720
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G LSACAH+GL+E+G F M+ + +EP + HY CM+D+ RAGL +EA I M +
Sbjct: 721 GALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQV 779
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EPD VWGALLG CQ+H NVEL EK AQ ++LDP ++ +V L ++YA AG + +V K
Sbjct: 780 EPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKM 839
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R +M +RG+ K+ PG S +EVDG VH F EE+ L L M+ G+
Sbjct: 840 RKVMLDRGVVKK-PGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGY 895
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 210/442 (47%), Gaps = 52/442 (11%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS+ A VF +K ++ ++ MI A + + +M+ +GI P+ +
Sbjct: 361 GSMEDALEVFDLVKGRNVVSWTAMIAGFA------QHGRIDEAFLFFNKMIESGIEPNRV 414
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +L C+ G + +++ G D V+ +++S++ CG + A +F+++
Sbjct: 415 TFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKI 474
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
S ++VV+WNAMI Y++ D AL F+ + K
Sbjct: 475 SKQNVVAWNAMITAYVQHEQYDNALATFQALLK--------------------------- 507
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
E +KP+ T S+L+ C +++ GKWVH + ++GL+ D+ + ALV M+
Sbjct: 508 --------EGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMF 559
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
CG + A +F +MPK+D ++W +I+ F +G + AFD F+ M+ G++P+ +TF
Sbjct: 560 VNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFT 619
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
GLL+ACA + +GR ++ + V +I + ++ G +A ++ +P
Sbjct: 620 GLLNACASPEALTEGRRLHALITEAAF-DCDVLVGTGLISMYTKCGSIEDAHQVFHKLP- 677
Query: 439 EPDVFVWGALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
+ +V+ W +++ G HG +EL ++ Q + D + ++ C A AG ++
Sbjct: 678 KKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSAC---AHAGLIEE 734
Query: 495 VKKTRNLMKERGI--RKEVPGC 514
MKE I R E GC
Sbjct: 735 GLHHFQSMKEFNIEPRMEHYGC 756
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 186/381 (48%), Gaps = 51/381 (13%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G+ A +F ++ D+Y++N+++ + KL++QM+ + PD
Sbjct: 159 GNTISAKQIFDDMREKDVYSWNLLL------GGYVQHGLYEEAFKLHEQMVQDSVKPDKR 212
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +L C + G +Y ++K G D+FV ++I++ + CG
Sbjct: 213 TFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCG------------ 260
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D+ A +F + R++ +W S+ITG + GR ++A LFQ
Sbjct: 261 -------------------DIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQ 301
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M+ EE V+PDK+ S+L AC + A++ GK VH ++ G D ++ +GTA++ MY
Sbjct: 302 RME----EEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMY 357
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG +E A VF + ++ ++WTAMI+ FA +G EAF F +M G+ PN VTF+
Sbjct: 358 TKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFM 417
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHV----YLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+L AC+ +++G+ + H+ Y + V ++ + ++ G +A R+
Sbjct: 418 SILGACSSPSALKRGQ---QIQDHIIEAGYGSDDRV--RTALLSMYAKCGSLKDAHRVFE 472
Query: 435 SMPMEPDVFVWGALLGGCQMH 455
+ + +V W A++ H
Sbjct: 473 KISKQ-NVVAWNAMITAYVQH 492
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 209/441 (47%), Gaps = 51/441 (11%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P+K T + + NA + +N+ + +E++ I+K+ + + + C G +
Sbjct: 209 PDKR-TFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC-----GDI 262
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
AT VF ++ DL T+ MI A + L+++M G+ PD + F
Sbjct: 263 GDATKVFDNLPTRDLVTWTSMITGLA------RHGRFKQACNLFQRMEEEGVQPDKVAFV 316
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
LL+ C G V+ ++ + G +++V +++S++ CG
Sbjct: 317 SLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCG--------------- 361
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
++ AL++F +K RN+ SW ++I GF Q GR EA F +M
Sbjct: 362 ----------------SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMI 405
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
S +E P+++T S+L AC+ A+ G+ + ++ +G D + TAL+ MY KC
Sbjct: 406 ESGIE----PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC 461
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G ++ A+ VF+++ K++ +AW AMI+ + + A TF+ + EG++PN TF +L
Sbjct: 462 GSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL 521
Query: 382 SACAHSGLVEKGRWC-FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
+ C S +E G+W F++M+ + HV + ++ + G A+ L MP +
Sbjct: 522 NVCKSSDSLELGKWVHFLIMKAGLESDLHVSN--ALVSMFVNCGDLMSAKNLFNDMP-KR 578
Query: 441 DVFVWGALLGGCQMHGNVELG 461
D+ W ++ G HG ++
Sbjct: 579 DLVSWNTIIAGFVQHGKNQVA 599
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 188/373 (50%), Gaps = 45/373 (12%)
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
VF+ IK + +ANA + + + +++ +++ + I T+ LL+
Sbjct: 68 VFADIKDTQ--------KANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQL 119
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
C K + G +Y + K GV D+F+ W
Sbjct: 120 CIKFKNLGDGERIYNHIKKSGVQPDIFM-------------------------------W 148
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
N +I Y + G+ A +F M++++++SWN ++ G+VQ G EA +L ++M V+
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQM----VQ 204
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+ VKPDK T S+L+ACA +D G+ ++ + ++G D D+ +GTAL++M+ KCG +
Sbjct: 205 DSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGD 264
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A VF +P +D + WT+MI+ A +G K+A + F+ ME EGV+P+ V FV LL AC H
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+E+G+ M+ V + +Y ++ + ++ G +A + + +V W
Sbjct: 325 PEALEQGKKVHARMKEVGW-DTEIYVGTAILSMYTKCGSMEDALEVF-DLVKGRNVVSWT 382
Query: 447 ALLGGCQMHGNVE 459
A++ G HG ++
Sbjct: 383 AMIAGFAQHGRID 395
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 142/305 (46%), Gaps = 40/305 (13%)
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N+++ + G+ EA+++ + + SS ++ + T +++L C + G+ ++
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIY----RQTYSALLQLCIKFKNLGDGERIYN 134
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
++++SG+ D+ + L++MY KCG A +F +M +KD +W ++ + +G +E
Sbjct: 135 HIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEE 194
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR----------WCFVMMRHVYLVE 407
AF +M + V+P+ TFV +L+ACA + V+KGR W + L+
Sbjct: 195 AFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALIN 254
Query: 408 PHV--------------------YHYACMIDILSRAGLFSEAERLIRSMPME---PDVFV 444
H+ + MI L+R G F +A L + M E PD
Sbjct: 255 MHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVA 314
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN--LCDMYAKAGRFDDVKKTRNLM 502
+ +LL C +E G+KV + ++ + YV + MY K G +D + +L+
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVG-WDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373
Query: 503 KERGI 507
K R +
Sbjct: 374 KGRNV 378
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 5/172 (2%)
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KDT A+++ + G EA +++ ++ T+ LL C + G
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ ++ V+P ++ + +I++ ++ G A+++ M E DV+ W LLGG HG
Sbjct: 133 YNHIKKSG-VQPDIFMWNTLINMYAKCGNTISAKQIFDDM-REKDVYSWNLLLGGYVQHG 190
Query: 457 NVELGEKVAQYLID--LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
E K+ + ++ + P F V++ + A A D ++ NL+ + G
Sbjct: 191 LYEEAFKLHEQMVQDSVKPDKRTF-VSMLNACADARNVDKGRELYNLILKAG 241
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/487 (39%), Positives = 292/487 (59%), Gaps = 20/487 (4%)
Query: 36 DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF-FCALSVSGSLSYATNVFSHIKRS 94
+ C M+ LK IH ++ HH+L+ +F F A+S +G L YA +FS I +
Sbjct: 3 EACLTMQALKLIHALAFRANL----HHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQP 58
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK-RLD- 152
+ + YN +IR + SS + + ++L+ QM + PD TF FLLK ++ R+D
Sbjct: 59 NTFFYNTLIRGYSKSSSPS------QSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDL 112
Query: 153 GLVGAS--VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
L+ AS ++G V+K G C +FV N++I L+ A G +A +F+EM DVVSW+ ++
Sbjct: 113 PLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLV 172
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
+ ++R+G+L++A +F M +R++ SW +++G+ Q R+REALELF+EM+ V +
Sbjct: 173 VAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGV----R 228
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD++ + SV+SAC LG ++ G VH Y+ +G V + AL+DMY KCGC++ A+ V
Sbjct: 229 PDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQV 288
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F M +K + W +MIS A +G ++AF F M G+RP+ VTF+ LL+A H G V
Sbjct: 289 FNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWV 348
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
+ G F M+ Y VE V HY CM+D+L RAG EA +LI SM M + VWGALL
Sbjct: 349 DDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLA 408
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
C+++G+VE+GE+V + LI+L P +Y+ L D+Y AGR + + R M G +K
Sbjct: 409 ACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKT 468
Query: 511 VPGCSSV 517
+ GCS V
Sbjct: 469 L-GCSWV 474
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/477 (39%), Positives = 271/477 (56%), Gaps = 43/477 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GSL A VF I + ++ +N MI A N L ++ +L GI P+
Sbjct: 462 GSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDN------ALATFQALLKEGIKPNSS 515
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +L C +G V+ ++K G+ D+ V N+++S+F+ CG
Sbjct: 516 TFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCG------------ 563
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
DL A +LF M KR++ SWN+II GFVQ G+ + A + F+
Sbjct: 564 -------------------DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK 604
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
MQ S + KPDKIT +L+ACA A+ G+ +H + + DCDV++GT L+ MY
Sbjct: 605 MMQESGI----KPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMY 660
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG +E A+ VF ++PKK+ +WT+MI+ +A +G GKEA + F +M+ EGV+P+ +TFV
Sbjct: 661 TKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFV 720
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G LSACAH+GL+E+G F M+ + +EP + HY CM+D+ RAGL +EA I M +
Sbjct: 721 GALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQV 779
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EPD VWGALLG CQ+H NVEL EK AQ ++LDP ++ +V L ++YA AG + +V K
Sbjct: 780 EPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKM 839
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R +M +RG+ K+ PG S +EVDG VH F EE+ L L M+ G+
Sbjct: 840 RKVMLDRGVVKK-PGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGY 895
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 192/373 (51%), Gaps = 45/373 (12%)
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
VF+ IK + +ANA + + + +++ +++ + I T+ LL+
Sbjct: 68 VFADIKDTQ--------KANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQL 119
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
C K + G +Y + K GV D+F++N++I+++ CG SA+
Sbjct: 120 CIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAK-------------- 165
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
+F M++++++SWN ++ G+VQ G EA +L ++M V+
Sbjct: 166 -----------------QIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQM----VQ 204
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+ VKPDK T S+L+ACA +D G+ ++ + ++G D D+ +GTAL++M+ KCG +
Sbjct: 205 DSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGD 264
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A VF +P +D + WT+MI+ A +G K+A + F+ ME EGV+P+ V FV LL AC H
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+E+G+ M+ V + +Y ++ + ++ G +A + + +V W
Sbjct: 325 PEALEQGKKVHARMKEVGW-DTEIYVGTAILSMYTKCGSMEDALEVF-DLVKGRNVVSWT 382
Query: 447 ALLGGCQMHGNVE 459
A++ G HG ++
Sbjct: 383 AMIAGFAQHGRID 395
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 210/442 (47%), Gaps = 52/442 (11%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS+ A VF +K ++ ++ MI A + + +M+ +GI P+ +
Sbjct: 361 GSMEDALEVFDLVKGRNVVSWTAMIAGFA------QHGRIDEAFLFFNKMIESGIEPNRV 414
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +L C+ G + +++ G D V+ +++S++ CG + A +F+++
Sbjct: 415 TFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKI 474
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
S ++VV+WNAMI Y++ D AL F+ + K
Sbjct: 475 SKQNVVAWNAMITAYVQHEQYDNALATFQALLK--------------------------- 507
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
E +KP+ T S+L+ C +++ GKWVH + ++GL+ D+ + ALV M+
Sbjct: 508 --------EGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMF 559
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
CG + A +F +MPK+D ++W +I+ F +G + AFD F+ M+ G++P+ +TF
Sbjct: 560 VNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFT 619
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
GLL+ACA + +GR ++ + V +I + ++ G +A ++ +P
Sbjct: 620 GLLNACASPEALTEGRRLHALITEAAF-DCDVLVGTGLISMYTKCGSIEDAHQVFHKLP- 677
Query: 439 EPDVFVWGALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
+ +V+ W +++ G HG +EL ++ Q + D + ++ C A AG ++
Sbjct: 678 KKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSAC---AHAGLIEE 734
Query: 495 VKKTRNLMKERGI--RKEVPGC 514
MKE I R E GC
Sbjct: 735 GLHHFQSMKEFNIEPRMEHYGC 756
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 201/421 (47%), Gaps = 56/421 (13%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
KN+ + + I+ I KS + + + C ++S A +F ++ D+Y+
Sbjct: 124 KNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTIS-----AKQIFDDMREKDVYS 178
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+N+++ + KL++QM+ + PD TF +L C + G
Sbjct: 179 WNLLL------GGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRE 232
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
+Y ++K G D+FV ++I++ + CG D
Sbjct: 233 LYNLILKAGWDTDLFVGTALINMHIKCG-------------------------------D 261
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+ A +F + R++ +W S+ITG + GR ++A LFQ M+ EE V+PDK+ S
Sbjct: 262 IGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRME----EEGVQPDKVAFVS 317
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+L AC + A++ GK VH ++ G D ++ +GTA++ MY KCG +E A VF + ++
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++WTAMI+ FA +G EAF F +M G+ PN VTF+ +L AC+ +++G+
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQ---Q 434
Query: 399 MMRHV----YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
+ H+ Y + V ++ + ++ G +A R+ + + +V W A++
Sbjct: 435 IQDHIIEAGYGSDDRV--RTALLSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITAYVQ 491
Query: 455 H 455
H
Sbjct: 492 H 492
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 209/441 (47%), Gaps = 51/441 (11%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P+K T + + NA + +N+ + +E++ I+K+ D + L + G +
Sbjct: 209 PDKR-TFVSMLNACADARNVDKGRELYNLILKAGW----DTDLFVGTALINMHIKC-GDI 262
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
AT VF ++ DL T+ MI A + L+++M G+ PD + F
Sbjct: 263 GDATKVFDNLPTRDLVTWTSMITGLA------RHGRFKQACNLFQRMEEEGVQPDKVAFV 316
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
LL+ C G V+ ++ + G +++V +++S++ CG
Sbjct: 317 SLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCG--------------- 361
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
++ AL++F +K RN+ SW ++I GF Q GR EA F +M
Sbjct: 362 ----------------SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMI 405
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
S +E P+++T S+L AC+ A+ G+ + ++ +G D + TAL+ MY KC
Sbjct: 406 ESGIE----PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC 461
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G ++ A+ VF+++ K++ +AW AMI+ + + A TF+ + EG++PN TF +L
Sbjct: 462 GSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL 521
Query: 382 SACAHSGLVEKGRWC-FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
+ C S +E G+W F++M+ + HV + ++ + G A+ L MP +
Sbjct: 522 NVCKSSDSLELGKWVHFLIMKAGLESDLHVSN--ALVSMFVNCGDLMSAKNLFNDMP-KR 578
Query: 441 DVFVWGALLGGCQMHGNVELG 461
D+ W ++ G HG ++
Sbjct: 579 DLVSWNTIIAGFVQHGKNQVA 599
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 142/305 (46%), Gaps = 40/305 (13%)
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N+++ + G+ EA+++ + + SS ++ + T +++L C + G+ ++
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIY----RQTYSALLQLCIKFKNLGDGERIYN 134
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
++++SG+ D+ + L++MY KCG A +F +M +KD +W ++ + +G +E
Sbjct: 135 HIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEE 194
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR----------WCFVMMRHVYLVE 407
AF +M + V+P+ TFV +L+ACA + V+KGR W + L+
Sbjct: 195 AFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALIN 254
Query: 408 PHV--------------------YHYACMIDILSRAGLFSEAERLIRSMPME---PDVFV 444
H+ + MI L+R G F +A L + M E PD
Sbjct: 255 MHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVA 314
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN--LCDMYAKAGRFDDVKKTRNLM 502
+ +LL C +E G+KV + ++ + YV + MY K G +D + +L+
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVG-WDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373
Query: 503 KERGI 507
K R +
Sbjct: 374 KGRNV 378
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KDT A+++ + G EA +++ ++ T+ LL C + G
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ ++ V+P ++ +I++ ++ G A+++ M E DV+ W LLGG HG
Sbjct: 133 YNHIKKSG-VQPDIFMRNTLINMYAKCGNTISAKQIFDDM-REKDVYSWNLLLGGYVQHG 190
Query: 457 NVELGEKVAQYLID--LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
E K+ + ++ + P F V++ + A A D ++ NL+ + G
Sbjct: 191 LYEEAFKLHEQMVQDSVKPDKRTF-VSMLNACADARNVDKGRELYNLILKAG 241
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 289/528 (54%), Gaps = 17/528 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHS--LITRLLFFCAL-----SVSGSLSYATNV 87
I +CK + +L ++H Q L S ++T++L+ S L YA +
Sbjct: 34 IRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFSLLHYAVST 93
Query: 88 FSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKEC 147
F +I+ + YN++IR + SS + H + QM + PD ++PF LK C
Sbjct: 94 FDNIQNPSTFCYNVIIRLHTLHSSALSALH------FFLQMRRFSVPPDFHSYPFALKAC 147
Query: 148 TKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWN 207
+ ++ QV KFG D++V NS+I ++ + A +FDE S+RDVVS+N
Sbjct: 148 AHLRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSYN 207
Query: 208 AMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
A++ G++++G+ A ++F M R+ SW S+I G+ QG EA+ LF M +E
Sbjct: 208 ALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKLE- 266
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
PD I + S LSACA LG ++ GK +H Y++++ + D + T LVD Y K GC++ A
Sbjct: 267 ---PDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKSGCIDTA 323
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF+ P K + W AM+ A++G + F M G++P+ ++F+G+L C+H
Sbjct: 324 IKVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVGCSHG 383
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GLV++ + F M +Y V + HY CM D+L+RAGL EA L + +PM D+FVW
Sbjct: 384 GLVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGDIFVWSG 443
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
LLGGC++HGN+E+ E+ A+ +++L P + Y L ++YA A R++DV K R M
Sbjct: 444 LLGGCRIHGNIEIAEQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRSMSSNRA 503
Query: 508 RKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K+ G SS+++ G+ HEF S E+ ++L+G+ + G +
Sbjct: 504 VKKNAGRSSIQLGGLTHEFLAGESLHAQSSEIYMVLDGIREHQSEGSY 551
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/519 (36%), Positives = 297/519 (57%), Gaps = 17/519 (3%)
Query: 34 AIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR 93
++ C++M E K+I I S Q HH +RLL F A+S G + ++ +F I
Sbjct: 11 SLKNCRSMSEFKQIQAFFITSGLSQ---HHPFASRLLSFSAISSWGDIDHSYRIFLQIPS 67
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+ +N +IR + K N + + ++ +ML G+ PD LT+PF+ K + +
Sbjct: 68 PTISNWNSIIRGFS-KGKNPNPS-----VSVFVKMLRFGVCPDHLTYPFVAKAVARLSEL 121
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
+ +V+ ++ K G+ D F+ NS+I ++ +CG + SAR +FDEM R+ VSWNAM+ GY
Sbjct: 122 RLALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGY 181
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
+ GDLD A +F M R++ SW+S+I G V+GG AL +F+ M+ K +
Sbjct: 182 AKCGDLDSAHQVFXSMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVG----PKANX 237
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+T+ SVL ACA+LGA++ G+ +H Y+ + + +V+ T+L+DMY KCG +E A VF+
Sbjct: 238 VTMVSVLCACAHLGALEXGRXMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRG 297
Query: 334 MP--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+P + D L W +I A +G E+ + F+EM+ G+ P+ +T++ L SACAH GLV
Sbjct: 298 VPMDQTDVLMWNTIIGGLATHGLVXESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVH 357
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+ W F + P HYACM+D+LSRAG +EA I MPMEP + GALL G
Sbjct: 358 EA-WHFFKSLGKQGMVPKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNG 416
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C H +L E+V + LI+L+P + Y+ L ++YA +D+ + R M+ RG++K
Sbjct: 417 CMNHRRFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKS- 475
Query: 512 PGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
PG S VEV G +H F E++ ++LN + + M
Sbjct: 476 PGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQM 514
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/510 (37%), Positives = 284/510 (55%), Gaps = 23/510 (4%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
+P +K++ L+ ID K+ L +IH + L+ HH I + + G
Sbjct: 19 APVDKDNLALL----IDNSKSTHHLLQIHAAL-----LRRGLHHHPILNFKLQRSYASLG 69
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
L ++ +F +++ + +I A+A + H L Y QML I P+ T
Sbjct: 70 HLHHSVTLFHRTPNPNVFLWTHIINAHA----HFDLFHHA--LSYYSQMLTHPIQPNAFT 123
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
LLK CT +V+ +KFG+ ++V ++ + G V SA+ LFD M
Sbjct: 124 LSSLLKACTLH----PARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMP 179
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
R +VS+ AM+ Y + G L A LF M +++ WN +I G+ Q G EAL F++
Sbjct: 180 ERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRK 239
Query: 260 MQSSSVEEM---VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
M V+P++IT+ +VLS+C +GA++ GKWVH Y+ +G+ +V +GTALVD
Sbjct: 240 MMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVD 299
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG +E A VF M KD +AW +MI + ++G+ EA F EM GV+P+ +T
Sbjct: 300 MYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDIT 359
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FV +L+ACAH+GLV KG F M+ Y +EP V HY CM+++L RAG EA L+RSM
Sbjct: 360 FVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSM 419
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
+EPD +WG LL C++H NV LGE++A+ L+ + YV L +MYA A + V
Sbjct: 420 EVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVA 479
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
K R++MK G+ KE PGCSS+EV VHEF
Sbjct: 480 KVRSMMKGSGVEKE-PGCSSIEVKNRVHEF 508
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/495 (38%), Positives = 295/495 (59%), Gaps = 18/495 (3%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATN 86
T L + + C M+ LK IH + ++ ++H ++ ++ F A+S +G L YA
Sbjct: 240 TSQSLASMAEACLAMQALKLIHARAFRA---NLHNHALVLAKIFRFAAVSPNGCLHYADR 296
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
+FS I + + + YN +IR + SS + + ++L+ QM + PD TF FLLK
Sbjct: 297 LFSQIHQPNTFFYNTLIRGYSKSSSPS------QSVQLFNQMRRNCVDPDGFTFTFLLKG 350
Query: 147 CTK-RLD-GLVGAS--VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
++ R+D L+ AS ++G V+K G C +FV N++I L+ A G +A +F+EM D
Sbjct: 351 RSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGAD 410
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
VVSW+ +++ ++R+G+L++A +F M +R++ SW +++G+ Q R+REALELF+EM+
Sbjct: 411 VVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRD 470
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
V +PD++ + V+SAC LG ++ G VH Y+ +G V + AL+DMY KCG
Sbjct: 471 VGV----RPDEVAMVIVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCG 526
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
C++ A+ VF M +K + W +MIS A +G ++AF F M G+RP+ VTF+ LL+
Sbjct: 527 CMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLT 586
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
A H G V+ G F M+ Y VE V HY CM+D+L RAG EA +LI SM M +
Sbjct: 587 AYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCND 646
Query: 443 FVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
VWGALL C+++G+VE+GE+V + LI+L P +Y+ L D+Y AGR + + R M
Sbjct: 647 VVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAM 706
Query: 503 KERGIRKEVPGCSSV 517
G +K + GCS V
Sbjct: 707 DVNGAKKTL-GCSWV 720
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 236/532 (44%), Gaps = 85/532 (15%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATN 86
T L + + C M+ LK IH + ++ ++H ++ ++ F A+S +G L YA
Sbjct: 86 TSQSLASMAEACLAMQALKLIHARAFRA---NLHNHALVLAKIFRFAAVSPNGCLHYADR 142
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
+FS I + + + YN +IR + SS + + ++L+ QM + PD TF FLLK
Sbjct: 143 LFSQIHQPNTFFYNTLIRGYSKSSSPS------QSVQLFNQMRRNCVDPDGFTFTFLLKG 196
Query: 147 CTK-RLD-GLVGAS--VYGQVVKFGVCDDV--FVQNSVI----------SLFMACGFVTS 190
++ R+D L+ AS ++G V + + ++ N V+ S+ AC
Sbjct: 197 RSRMRIDLPLIVASDEIHGAGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEAC-LAMQ 255
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYL-------RSGDLDVALDLFRRMKKRNIFSWNSIITG 243
A L + R + +A+++ + +G L A LF ++ + N F +N++I G
Sbjct: 256 ALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRG 315
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY----LGAIDHGKWVHGYL 299
+ + ++++LF +M+ + V+ PD T +L + L I +HG +
Sbjct: 316 YSKSSSPSQSVQLFNQMRRNCVD----PDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAV 371
Query: 300 RRSGLDCDVVIGTALVDMYG-------------------------------KCGCVERAY 328
+ G + + AL+ +Y + G +E A
Sbjct: 372 LKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELAR 431
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF EMP++D ++WT M+S +A +EA + FREM GVRP+ V V ++SAC G
Sbjct: 432 QVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLG 491
Query: 389 LVEKGRWCFVMMRHVYLVEP----HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+E G H Y+ E V +ID+ ++ G A ++ +M +
Sbjct: 492 DLETG-----FEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNME-RKSLIT 545
Query: 445 WGALLGGCQMHGNVELGEKVAQYLI--DLDPLNHAFYVNLCDMYAKAGRFDD 494
W +++ C HGN E +V ++ + P + ++ L Y G DD
Sbjct: 546 WNSMISACANHGNAEDAFRVFTLMLXSGIRP-DGVTFLALLTAYTHKGWVDD 596
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 294/522 (56%), Gaps = 15/522 (2%)
Query: 30 ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
+ + + +CK +REL+ IH Q + + L N S+ ++ F + + G + A +F
Sbjct: 22 VCHHLLTQCKTIRELQRIHAQAL-THGLHPN-QQSISCKI--FRSYAEFGRPADAGRLFD 77
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
I D+ ++ ++ S H K + ++ + +G PD L
Sbjct: 78 EIPHPDIISFTSLM------SLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGG 131
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
D +G+ V+G + + G+ ++ V N+++ ++ CG AR +FD M +D V+W +M
Sbjct: 132 LGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSM 191
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
+ GY++ +D AL F +M ++ SW ++ITG VQ + +ALELF +M + E
Sbjct: 192 LYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKM----LLEGH 247
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
+P+ ITI VLSACA +GA+D G+ +HGY +S ++++ AL+DMY K G + A+
Sbjct: 248 RPNHITIVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFS 307
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF+E+ KD WT MIS F + G G++A + F +M G+ PN VTFV +LSAC+H+GL
Sbjct: 308 VFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGL 367
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
+++GR F MR VY ++P + HY CM+D+L R GL EAE LI M +EPD+ +W +LL
Sbjct: 368 IQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLL 427
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C HGN L E +I +P + YV L +MYA + R+ + R M R I K
Sbjct: 428 SACLAHGNDRLAEIAGMEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYK 487
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+ PGCS +EVDGVVHEF ++ + E+ + L +++ +K
Sbjct: 488 K-PGCSWIEVDGVVHEFLVEDKTHDARREIYVTLEIMARHLK 528
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 298/535 (55%), Gaps = 51/535 (9%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PN+ + IL A +++ ++IH +IIK+ + T+D R + GSL
Sbjct: 405 PNRVTFMSIL-GACSRPSALKQGRQIHDRIIKAGYI-TDDR----VRTALLSMYAKCGSL 458
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A NVF I + ++ +N MI A N + ++ +L GI PD TF
Sbjct: 459 MDARNVFERISKQNVVAWNAMITAYVQHEKYDN------AVATFQALLKEGIKPDSSTFT 512
Query: 142 FLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
+L C K D L +G V +++ G D+ ++N+++S+F+ CG
Sbjct: 513 SILNVC-KSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCG-------------- 557
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
DL A++LF M +R++ SWN+II GFVQ G + A + F+ M
Sbjct: 558 -----------------DLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMM 600
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
Q S V KPD+IT +L+ACA A+ G+ +H + + LDCDVV+GT L+ MY K
Sbjct: 601 QESGV----KPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTK 656
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG ++ A+ VF +PKK+ +WT+MI+ +A +G GKEA + F +M+ EGV+P+ +TFVG
Sbjct: 657 CGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGA 716
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
LSACAH+GL+++G F M+ + +EP + HY CM+D+ RAGL EA I M ++P
Sbjct: 717 LSACAHAGLIKEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKP 775
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
D +WGALLG CQ+H +VEL EKVAQ ++LDP + YV L ++YA AG + +V K R
Sbjct: 776 DSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRK 835
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+M +RG+ K+ PG S +EVDG VH F EE+ L L MK G+
Sbjct: 836 VMLDRGVVKK-PGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGY 889
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 190/378 (50%), Gaps = 45/378 (11%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G+ + A +F + D+Y++N+++ + +L++QM+ G+ PD
Sbjct: 153 GNTNSAKQIFDEMPDKDVYSWNLLL------GGYVQHRRYEEAFRLHEQMVQDGVKPDKY 206
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF ++L C + G ++ ++ G D+FV ++I++ + CG V
Sbjct: 207 TFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGV---------- 256
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D AL +F + +R++ +W S+ITG + + ++A LFQ
Sbjct: 257 ---------------------DDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQ 295
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M+ EE V+PDK+ S+L AC + A++ GK VH ++ GLD ++ +GTAL+ MY
Sbjct: 296 VME----EEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMY 351
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG +E A VF + ++ ++WTAMI+ FA +G +EAF F +M G+ PN VTF+
Sbjct: 352 TKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFM 411
Query: 379 GLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+L AC+ +++GR +++ Y+ + V ++ + ++ G +A + +
Sbjct: 412 SILGACSRPSALKQGRQIHDRIIKAGYITDDRV--RTALLSMYAKCGSLMDARNVFERIS 469
Query: 438 MEPDVFVWGALLGGCQMH 455
+ +V W A++ H
Sbjct: 470 KQ-NVVAWNAMITAYVQH 486
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 190/378 (50%), Gaps = 43/378 (11%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS+ A VF+ +K ++ ++ MI A + + +M+ +GI P+ +
Sbjct: 355 GSMEDALEVFNLVKGRNVVSWTAMIAGFA------QHGRMEEAFLFFNKMIESGIEPNRV 408
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +L C++ G ++ +++K G D V+ +++S++ CG + AR
Sbjct: 409 TFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDAR------ 462
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
++F R+ K+N+ +WN++IT +VQ + A+ FQ
Sbjct: 463 -------------------------NVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQ 497
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+ ++E +KPD T S+L+ C A++ GKWV + R+G + D+ I ALV M+
Sbjct: 498 AL----LKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMF 553
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
CG + A +F +MP++D ++W +I+ F +G + AFD F+ M+ GV+P+ +TF
Sbjct: 554 VNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFT 613
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
GLL+ACA + +GR ++ L + V +I + ++ G +A + ++P
Sbjct: 614 GLLNACASPEALTEGRRLHALITEAAL-DCDVVVGTGLISMYTKCGSIDDAHLVFHNLP- 671
Query: 439 EPDVFVWGALLGGCQMHG 456
+ +V+ W +++ G HG
Sbjct: 672 KKNVYSWTSMITGYAQHG 689
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
D+ WN +I Y + G+ + A +F M ++++SWN ++ G+VQ R EA L ++M
Sbjct: 138 DIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQM- 196
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
V++ VKPDK T +L+ACA +D G + + +G D D+ +GTAL++M+ KC
Sbjct: 197 ---VQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKC 253
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G V+ A VF +P++D + WT+MI+ A + K+A + F+ ME EGV+P+ V FV LL
Sbjct: 254 GGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLL 313
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
AC H +E+G+ M+ V L + +Y ++ + ++ G +A + ++ +
Sbjct: 314 KACNHPEALEQGKRVHARMKEVGL-DTEIYVGTALLSMYTKCGSMEDALEVF-NLVKGRN 371
Query: 442 VFVWGALLGGCQMHGNVE 459
V W A++ G HG +E
Sbjct: 372 VVSWTAMIAGFAQHGRME 389
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC-AHSGLVEKGRW 395
K+T A ++ + G EA +++ ++ + T+ LL C H L + R
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGER- 125
Query: 396 CFVMMRHVYL--VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
+ H+ ++P ++ + +I + ++ G + A+++ MP + DV+ W LLGG
Sbjct: 126 ---IHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMP-DKDVYSWNLLLGGYV 181
Query: 454 MHGNVE----LGEKVAQYLIDLDPLNHAFYVNLC 483
H E L E++ Q + D + +N C
Sbjct: 182 QHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNAC 215
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 189/561 (33%), Positives = 310/561 (55%), Gaps = 54/561 (9%)
Query: 3 KKLQMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH 62
K+LQ + S+ K + N T+ + +D+ +++ LK++H++I C+ + H
Sbjct: 15 KQLQTLVLSI--QKPKFTQQNVVLTENLCGQILDKNPDIKYLKKLHSKI----CIDHDLH 68
Query: 63 HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
+ + A +V G ++F I + ++ +N+MIR S N+ L
Sbjct: 69 SNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIR------SYVNNHLYSDAL 122
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
++K M GI PD T+P +LK + D VG ++ VV+ G+ +VFV N +IS++
Sbjct: 123 LVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMY 182
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD------------------ 224
CG + A + D+M RDVVSWN+++ G R+G D AL+
Sbjct: 183 GKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMA 242
Query: 225 -------------------LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
+F ++ +++ SWN +I ++ EA+++F +M+ +V
Sbjct: 243 SLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAV 302
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
+ PD I+IASVL AC L A+ G+ +H Y+ R L ++++ AL+DMY KCGC+E
Sbjct: 303 D----PDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLE 358
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
A VF +M +D ++WT+MIS + +NG G++A F M+ G+ P+ + FV +LSAC+
Sbjct: 359 YAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACS 418
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
H+GL+++GR+ F +M + P + H+ CM+D+L RAG EA I+ MPMEP+ VW
Sbjct: 419 HAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVW 478
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
GALL C+++ N+ +G A L L P +YV L ++YAKAGR++DV R++MK +
Sbjct: 479 GALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTK 538
Query: 506 GIRKEVPGCSSVEVDGVVHEF 526
GI+K +PG S+ E+D VH F
Sbjct: 539 GIKK-MPGVSNFELDNRVHTF 558
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 297/553 (53%), Gaps = 58/553 (10%)
Query: 10 YSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
Y+ L P + T + + C L+++H +II+ Q H LI++
Sbjct: 7 YTALTFPDYLPTLRSFDTTSSISTLLKACTTTSTLEQVHARIIRKGLHQ---DHFLISQF 63
Query: 70 LFFC-ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM 128
L C +LS + SY T+VF+ + +N I+ + + + L+ +M
Sbjct: 64 LTLCNSLS---NFSYTTSVFNGVSSPSTVLWNTYIKGY------SENYSVSLTVSLFIRM 114
Query: 129 LCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFV 188
+ PD T+P L+K C+K G + +G V+ GV DVFV S+I L+ CG +
Sbjct: 115 KRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEI 174
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
AR +FDEM R+VVSW AMI GY DL A LF M ++N SWN+II+G+V+ G
Sbjct: 175 LCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCG 234
Query: 249 RAREALELFQEMQSSSV------------------------------------------- 265
R A ++F EM +V
Sbjct: 235 DLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALIFRVCA 294
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV-IGTALVDMYGKCGCV 324
E VKPD+ + S++SAC+ +G+++ KWV Y+R+S +D + AL+DM KCG +
Sbjct: 295 EWNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSM 354
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
+RA +F+EMPK+D +++ +M+ +++G G +A F M EG+ P+ V F +L+AC
Sbjct: 355 DRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTAC 414
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+ +GLV++G + F M+ Y + P HYACM+D+L RAG EA L++SMP+EP
Sbjct: 415 SRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGA 474
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
WGALLG C++H ++ELGE VA L +L+P N YV L ++YA A ++ DV RN M+E
Sbjct: 475 WGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRE 534
Query: 505 RGIRKEVPGCSSV 517
RGIRK +PGCS +
Sbjct: 535 RGIRK-IPGCSWI 546
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/474 (36%), Positives = 285/474 (60%), Gaps = 13/474 (2%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRA-NACKSSETNDTHSGKCLKLYKQMLCTGIS 134
S+ G + A VF + D++++N+MI N K E + ++L +M +S
Sbjct: 181 SLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYE-------ESIELLVEMERNLVS 233
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
P +T +L C+K D + V+ V + + ++N++++ + ACG + A +
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRI 293
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F M RDV+SW +++ GY+ G+L +A F +M R+ SW +I G+++ G E+L
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESL 353
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
E+F+EMQS+ + PD+ T+ SVL+ACA+LG+++ G+W+ Y+ ++ + DVV+G AL
Sbjct: 354 EIFREMQSAGM----IPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNAL 409
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+DMY KCGC E+A VF +M ++D WTAM+ A NG G+EA F +M+ ++P+
Sbjct: 410 IDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDD 469
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+T++G+LSAC HSG+V++ R F MR + +EP + HY CM+D+L RAGL EA ++R
Sbjct: 470 ITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILR 529
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
MPM P+ VWGALLG ++H + + E A+ +++L+P N A Y LC++YA R+ D
Sbjct: 530 KMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKD 589
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
+++ R + + I+K PG S +EV+G HEF + EE+ + L L++
Sbjct: 590 LREVRRKIVDVAIKK-TPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/514 (27%), Positives = 228/514 (44%), Gaps = 106/514 (20%)
Query: 12 LLNSPAKVSPPNKEST--KLILRNAIDE---------------CKNMRELKEIHTQIIK- 53
+L +P K SP N E + K +L + I E CK + K++H+Q I
Sbjct: 2 ILRNPLK-SPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITR 60
Query: 54 ----SPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACK 109
+P Q +L F + G +SYA +F I D+ +N MI+ +
Sbjct: 61 GVAPNPTFQK--------KLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKV 112
Query: 110 SSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV-GASVYGQVVKFGV 168
+ G+ ++LY ML G++PD TFPFLL + L G ++ VVKFG+
Sbjct: 113 DCD------GEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGL 166
Query: 169 CDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRR 228
+++VQN+++ ++ CG + AR +FD DV SWN MI GY R
Sbjct: 167 GSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY-------------NR 213
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
MK+ E++EL EM+ + +V P +T+ VLSAC+ +
Sbjct: 214 MKE------------------YEESIELLVEMERN----LVSPTSVTLLLVLSACSKVKD 251
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK---------------- 332
D K VH Y+ + + + ALV+ Y CG ++ A +F+
Sbjct: 252 KDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKG 311
Query: 333 ---------------EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
+MP +D ++WT MI + G E+ + FREM++ G+ P+ T
Sbjct: 312 YVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V +L+ACAH G +E G W + + V A +ID+ + G +A+++ M
Sbjct: 372 VSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNA-LIDMYFKCGCSEKAQKVFHDMD 430
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
+ D F W A++ G +G + KV + D+
Sbjct: 431 -QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDM 463
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 16/295 (5%)
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G + A LF ++ + ++ WN++I G+ + E + L+ M ++E V PD T
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM----LKEGVTPDSHTF 137
Query: 277 ASVLSACAYLG-AIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+L+ G A+ GK +H ++ + GL ++ + ALV MY CG ++ A GVF
Sbjct: 138 PFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRC 197
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
K+D +W MIS + +E+ + EME V P VT + +LSAC+ V+
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK---VKDKDL 254
Query: 396 CFVMMRHVY--LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
C + +V EP + +++ + G A R+ RSM DV W +++ G
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYV 313
Query: 454 MHGNVELGEKVAQYLIDLDPL-NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
GN+ K+A+ D P+ + + + D Y +AG F++ + M+ G+
Sbjct: 314 ERGNL----KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 171/495 (34%), Positives = 282/495 (56%), Gaps = 36/495 (7%)
Query: 34 AIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR 93
++ C + +E+K++H Q + S L +H L R L +++S + YA ++F I
Sbjct: 19 SLRTCHDFQEVKQLHAQFVVSGLL---GYHPLCARRLLEAYVTMS-QIYYAFSIFERIPS 74
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
D++ YN MIR G++ D T+ F+LK C+
Sbjct: 75 PDVFVYNTMIR---------------------------GLTMDNFTYTFVLKACSHLKAP 107
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G V+ Q++K G+ D + +S+I ++ G + A + E S + ++ NAMI GY
Sbjct: 108 FEGKQVHCQIIKAGIVPDTHIHSSLIHMYTNSGSIDDAERVLGEFSEENTLAKNAMISGY 167
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
L G +D A +F M ++ SW+++ITG+ + G EAL LFQ+M S + P++
Sbjct: 168 LTEGRVDKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHI----LPNE 223
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+ S+LSAC LG + G+W+H Y+ ++ + + TAL+DMY K G +E YG+F++
Sbjct: 224 AALVSLLSACGQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQK 283
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M ++D + W MIS FA++G+ + F F EM A+G+RPN V FV +LSAC+H+G VE+G
Sbjct: 284 MARRDVVTWGVMISAFAIHGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCVEEG 343
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R F M H + ++P + HY CM+D+L RAGL ++AE+LI SMP +P+ +WG+LLG C+
Sbjct: 344 RQYFSQMEHGFGIKPSIEHYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGACR 403
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
H +++ G + L++L+P + + M+A AG ++ K R ++ E+ + G
Sbjct: 404 THNDLKRGTWAFENLMELEPTSGDRHKLAGLMFANAGEKEEAAKIRKMIHEKEMVTTC-G 462
Query: 514 CSSVEVDGVVHEFSM 528
S +EV+G VHEF++
Sbjct: 463 SSFIEVEGAVHEFTV 477
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/513 (37%), Positives = 288/513 (56%), Gaps = 52/513 (10%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M + ++H +++K+ ++H + RLL CA S SLSYA ++F I D + +N
Sbjct: 1 MNHIYKLHARLLKT---GHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+IRA+A D+ L L+ +M G+SPD TFPF+LK C + GL ++
Sbjct: 58 TIIRAHA-------DSSPSFSLSLFSKMAMAGVSPDHFTFPFVLKACARLQTGL---DLH 107
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+ K G DV+VQN +I + CGF LD
Sbjct: 108 SLLFKLGFDSDVYVQNGLIHFYGCCGF-------------------------------LD 136
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
AL +F M +R++ SW+S+I F + G EAL LFQ MQ VKPD++ + SV+
Sbjct: 137 FALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGT---VKPDEVIVLSVV 193
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SA + LG ++ GKW+ G++ R+GL+ V +GTALVDM+ +CGC+E + VF EM +++ L
Sbjct: 194 SAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVL 253
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
WTA+I+ A++G EA F EM G +P+HVTF G+L AC+H GLV +G F +
Sbjct: 254 TWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESI 313
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
R+ Y +EP HY CM+D+L RAGL +EA + + MP+ P+ +W LLG C H +EL
Sbjct: 314 RNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIEL 373
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
EKV + + +LD + YV L ++Y GR+ + RN M+E+ I K+ PGCS + V+
Sbjct: 374 AEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKK-PGCSLINVN 432
Query: 521 GVVHEFSM--KGSPKV--VKEELVLILNGLSKI 549
++HEF P+ ++E LV +++ L +
Sbjct: 433 HLIHEFVAGDNNHPQFESIREFLVSMIDSLKVV 465
>gi|334187520|ref|NP_001190262.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
gi|223635618|sp|P0C8Q7.1|PP369_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08305
gi|332003897|gb|AED91280.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
Length = 534
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 185/506 (36%), Positives = 300/506 (59%), Gaps = 17/506 (3%)
Query: 24 KESTKLILRNAI-DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS 82
K S+ L+ ++ + +CK+M EL +IHT +I L ++ +++ L F ALS SG +
Sbjct: 3 KSSSSLVAKSILRHQCKSMSELYKIHTLLI---TLGLSEEEPFVSQTLSFSALSSSGDVD 59
Query: 83 YATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPF 142
YA S + Y +N +IR +N + K + +Y QML G+ PD +T+PF
Sbjct: 60 YAYKFLSKLSDPPNYGWNFVIRGF------SNSRNPEKSISVYIQMLRFGLLPDHMTYPF 113
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
L+K ++ + +G S++ VVK G+ D+F+ N++I ++ + SAR LFDEM +++
Sbjct: 114 LMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKN 173
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
+V+WN+++ Y +SGD+ A +F M +R++ +W+S+I G+V+ G +ALE+F +M
Sbjct: 174 LVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMR 233
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
K +++T+ SV+ ACA+LGA++ GK VH Y+ L V++ T+L+DMY KCG
Sbjct: 234 MGSS---KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCG 290
Query: 323 CVERAYGVF--KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
+ A+ VF + + D L W A+I A +G+ +E+ F +M + P+ +TF+ L
Sbjct: 291 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 350
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
L+AC+H GLV++ W F EP HYACM+D+LSRAGL +A I MP++P
Sbjct: 351 LAACSHGGLVKEA-WHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKP 409
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
+ GALL GC HGN+EL E V + LI+L P N YV L ++YA +F + R
Sbjct: 410 TGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMRE 469
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEF 526
M+++G++K + G S +++DG H F
Sbjct: 470 AMEKKGVKK-IAGHSILDLDGTRHRF 494
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 183/469 (39%), Positives = 280/469 (59%), Gaps = 23/469 (4%)
Query: 63 HSLITRLLFFCALSVS----------GSLSYATNVFSHIKRSDLYTYNIMIRA-NACKSS 111
H+ + +L F L VS G L A VF + DL ++N ++ CK
Sbjct: 100 HARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRF 159
Query: 112 ETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDD 171
+ L +++ M G+ D +T ++ CT + V ++ + + V D
Sbjct: 160 R-------EVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEID 212
Query: 172 VFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
V++ N++I ++ G V AR +FD+M R++VSWNAMI+GY ++G+L A +LF M +
Sbjct: 213 VYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQ 272
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
R++ SW ++IT + Q G+ EAL LF+EM +E VKPD+IT+ASVLSACA+ G++D
Sbjct: 273 RDVISWTNMITSYSQAGQFTEALRLFKEM----MESKVKPDEITVASVLSACAHTGSLDV 328
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
G+ H Y+++ + D+ +G AL+DMY KCG VE+A VFKEM KKD+++WT++IS A+
Sbjct: 329 GEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAV 388
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
NG+ A D F M E V+P+H FVG+L ACAH+GLV+KG F M VY ++P +
Sbjct: 389 NGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMK 448
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
HY C++D+LSR+G A I+ MP+ PDV +W LL Q+HGN+ L E + L++L
Sbjct: 449 HYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAEIATKKLLEL 508
Query: 472 DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
DP N YV + YA + R++D K R LM++ ++K G S +E++
Sbjct: 509 DPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQKP-SGSSCIEME 556
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 235/496 (47%), Gaps = 81/496 (16%)
Query: 54 SPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSET 113
+P L+T+ S I L+ ALS S L A N+F I R L +NIMIR + S +
Sbjct: 3 NPNLRTDP--STIYNLIKSYALSPSTILK-AHNLFQQIHRPTLPFWNIMIRGWSV-SDQP 58
Query: 114 NDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF 173
N+ +++Y M G+ + LT+ FL K C + D G++++ +V+K G ++
Sbjct: 59 NE-----AIRMYNLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLY 113
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRN 233
V N++I+++ +CG + A+ +FDEM RD+VSWN+++ GY
Sbjct: 114 VSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGY-------------------- 153
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
Q R RE L +F+ M+ + VK D +T+ V+ AC LG
Sbjct: 154 -----------GQCKRFREVLGVFEAMRVAG----VKGDAVTMVKVVLACTSLGEWGVAD 198
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE-------------------- 333
+ Y+ + ++ DV +G L+DMYG+ G V A GVF +
Sbjct: 199 AMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAG 258
Query: 334 -----------MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
M ++D ++WT MI+ ++ G EA F+EM V+P+ +T +LS
Sbjct: 259 NLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLS 318
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
ACAH+G ++ G ++ Y V+ +Y +ID+ + G+ +A + + M + D
Sbjct: 319 ACAHTGSLDVGEAAHDYIQK-YDVKADIYVGNALIDMYCKCGVVEKALEVFKEM-RKKDS 376
Query: 443 FVWGALLGGCQMHGNVELG-EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD-VKKTRN 500
W +++ G ++G + + ++ L ++ +H +V + A AG D ++ +
Sbjct: 377 VSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFES 436
Query: 501 LMKERGIRKEVP--GC 514
+ K G++ E+ GC
Sbjct: 437 MEKVYGLKPEMKHYGC 452
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/474 (36%), Positives = 285/474 (60%), Gaps = 13/474 (2%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRA-NACKSSETNDTHSGKCLKLYKQMLCTGIS 134
S+ G + A VF + D++++N+MI N K E + ++L +M +S
Sbjct: 181 SLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYE-------ESIELLVEMERNLVS 233
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
P +T +L C+K D + V+ V + + ++N++++ + ACG + A +
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRI 293
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F M RDV+SW +++ GY+ G+L +A F +M R+ SW +I G+++ G E+L
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESL 353
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
E+F+EMQS+ + PD+ T+ SVL+ACA+LG+++ G+W+ Y+ ++ + DVV+G AL
Sbjct: 354 EIFREMQSAGM----IPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNAL 409
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+DMY KCGC E+A VF +M ++D WTAM+ A NG G+EA F +M+ ++P+
Sbjct: 410 IDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDD 469
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+T++G+LSAC HSG+V++ R F MR + +EP + HY CM+D+L RAGL EA ++R
Sbjct: 470 ITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILR 529
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
MPM P+ VWGALLG ++H + + E A+ +++L+P N A Y LC++YA R+ D
Sbjct: 530 KMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKD 589
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
+++ R + + I+K PG S +EV+G HEF + EE+ + L L++
Sbjct: 590 LREVRRKIVDVAIKK-TPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/514 (27%), Positives = 228/514 (44%), Gaps = 106/514 (20%)
Query: 12 LLNSPAKVSPPNKEST--KLILRNAIDE---------------CKNMRELKEIHTQIIK- 53
+L +P K SP N E + K +L + I E CK + K++H+Q I
Sbjct: 2 ILRNPLK-SPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITR 60
Query: 54 ----SPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACK 109
+P Q +L F + G +SYA +F I D+ +N MI+ +
Sbjct: 61 GVAPNPTFQK--------KLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKV 112
Query: 110 SSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV-GASVYGQVVKFGV 168
+ G+ ++LY ML G++PD TFPFLL + L G ++ VVKFG+
Sbjct: 113 DCD------GEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGL 166
Query: 169 CDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRR 228
+++VQN+++ ++ CG + AR +FD DV SWN MI GY R
Sbjct: 167 GSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY-------------NR 213
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
MK+ E++EL EM+ + +V P +T+ VLSAC+ +
Sbjct: 214 MKE------------------YEESIELLVEMERN----LVSPTSVTLLLVLSACSKVKD 251
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK---------------- 332
D K VH Y+ + + + ALV+ Y CG ++ A +F+
Sbjct: 252 KDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKG 311
Query: 333 ---------------EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
+MP +D ++WT MI + G E+ + FREM++ G+ P+ T
Sbjct: 312 YVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V +L+ACAH G +E G W + + V A +ID+ + G +A+++ M
Sbjct: 372 VSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNA-LIDMYFKCGCSEKAQKVFHDMD 430
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
+ D F W A++ G +G + KV + D+
Sbjct: 431 -QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDM 463
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 16/295 (5%)
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G + A LF ++ + ++ WN++I G+ + E + L+ M ++E V PD T
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM----LKEGVTPDSHTF 137
Query: 277 ASVLSACAYLG-AIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+L+ G A+ GK +H ++ + GL ++ + ALV MY CG ++ A GVF
Sbjct: 138 PFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRC 197
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
K+D +W MIS + +E+ + EME V P VT + +LSAC+ V+
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK---VKDKDL 254
Query: 396 CFVMMRHVY--LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
C + +V EP + +++ + G A R+ RSM DV W +++ G
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYV 313
Query: 454 MHGNVELGEKVAQYLIDLDPL-NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
GN+ K+A+ D P+ + + + D Y +AG F++ + M+ G+
Sbjct: 314 ERGNL----KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 301/533 (56%), Gaps = 23/533 (4%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
+M + ++H+ I KSP L S + + C G+++ A VF + ++ ++
Sbjct: 167 DMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC-----GNVNDAQRVFDEMGDRNVVSW 221
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
N +I + + + + L +++ ML + + PD +T ++ C VG V
Sbjct: 222 NSLI------TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 160 YGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
+G+VVK + +D+ + N+ + ++ C + AR +FD M R+V++ +MI GY +
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
A +F +M +RN+ SWN++I G+ Q G EAL LF ++ E V P + A+
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK----RESVCPTHYSFAN 391
Query: 279 VLSACAYLGAIDHGKWVH------GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+L ACA L + G H G+ +SG + D+ +G +L+DMY KCGCVE Y VF+
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
+M ++D ++W AMI FA NGYG EA + FREM G +P+H+T +G+LSAC H+G VE+
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
GR F M + V P HY CM+D+L RAG EA+ +I MPM+PD +WG+LL C
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
++H N+ LG+ VA+ L++++P N YV L +MYA+ G+++DV R M++ G+ K+ P
Sbjct: 572 KVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ-P 630
Query: 513 GCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSME 565
GCS +++ G H F +K K+++ +L+ L M+ I LS E
Sbjct: 631 GCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGSLSSE 683
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 169/320 (52%), Gaps = 6/320 (1%)
Query: 136 DCLTFPFLLKECTK-RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
D F LL C K +L + V+ V+K G +++F+QN +I + CG + R +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD+M R++ +WN+++ G + G LD A LFR M +R+ +WNS+++GF Q R EAL
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
F M +E ++ + ASVLSAC+ L ++ G VH + +S DV IG+AL
Sbjct: 138 CYFAMMH----KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSAL 193
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
VDMY KCG V A VF EM ++ ++W ++I+ F NG EA D F+ M V P+
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE 253
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
VT ++SACA ++ G+ + + + +D+ ++ EA +
Sbjct: 254 VTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 435 SMPMEPDVFVWGALLGGCQM 454
SMP+ +V +++ G M
Sbjct: 314 SMPIR-NVIAETSMISGYAM 332
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/491 (37%), Positives = 298/491 (60%), Gaps = 24/491 (4%)
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
+F + D+ ++N+MI + K D + C + +G+ PD T L
Sbjct: 194 LFDEMPDRDVISWNVMI-SGYVKCRRFEDAINVFC----RMQEESGLMPDEATVVSTLSA 248
Query: 147 CT--KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
CT KRL+ +G ++ V+ V + N+++ ++ CG ++ AR +F+EM +++V+
Sbjct: 249 CTALKRLE--LGKKIH-HYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVI 305
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
W M+ GY G+L+ A +LF R++ W ++I G+VQ R EA+ LF+EMQ
Sbjct: 306 CWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRK 365
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
V KPDK + S+L+ CA GAI+ GKW+H ++ + + D V+GTAL++MY KCG +
Sbjct: 366 V----KPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFI 421
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
E+A +F + KDT +WT++I A+NG +A + F +M+ GVRP+ +TF+G+LSAC
Sbjct: 422 EKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSAC 481
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD--- 441
+H GLVE+GR F MR Y ++P V HY C++D+L RAGL +EAE LI+ +P E
Sbjct: 482 SHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAIT 541
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
V ++G+LL C+++GNVE+GE+VA+ L+ + + + + L ++YA A R++DV K R
Sbjct: 542 VPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRK 601
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVK-EELVLILNGLSKIM----KNGGFG 556
MK+ G++K PGCSS+EVD ++HEF G P + E+ +LN ++K + KN G
Sbjct: 602 MKDLGVKK-TPGCSSIEVDSIIHEF-FSGHPSHPEMREIYYMLNIMAKPLLGSAKNEMEG 659
Query: 557 QYIRGLSMEAQ 567
+ + G++ + Q
Sbjct: 660 EDLVGMTFDEQ 670
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 156/557 (28%), Positives = 264/557 (47%), Gaps = 102/557 (18%)
Query: 5 LQMVSYSLLNSPAKVSPPNKESTKLILRNAID---ECKNMRELKEIHTQIIKSPCLQTND 61
L+++S L+ +K S +T L ++ I CK+M LK+IH QI +
Sbjct: 11 LELISRHGLSRRSKFSTFTNPTTGLSQQSCISYLKSCKSMTHLKQIHAQIFR-----VGL 65
Query: 62 HHSLIT--RLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
H +++ +L+ FC +G+L+YA +F +I+ L YN++I+A A K +
Sbjct: 66 HQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKG------NYK 119
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L L+ ++ G+ PD T+PF+ K + + G V K G+ D +V+NS+I
Sbjct: 120 RTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLI 179
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
++ +MLFDEM +RDV+SWN MI GY++ + A+++F RM++
Sbjct: 180 DMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQE-------- 231
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
E + PD+ T+ S LSAC L ++ GK +H Y+
Sbjct: 232 --------------------------ESGLMPDEATVVSTLSACTALKRLELGKKIHHYV 265
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA--------- 350
R + +IG AL+DMY KCGC+ A VF+EMP K+ + WT M+S +A
Sbjct: 266 -RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEAR 324
Query: 351 -----------------LNGYGK-----EAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+NGY + EA FREM+ V+P+ V LL+ CA +G
Sbjct: 325 ELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTG 384
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYA----CMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+E+G+W H ++ E + A +I++ ++ G +A + + ++ D
Sbjct: 385 AIEQGKWI-----HEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVK-DTAS 438
Query: 445 WGALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
W +++ G M+G +EL K+ Q + D + ++ C + G ++ +K N
Sbjct: 439 WTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSAC---SHGGLVEEGRKFFN 495
Query: 501 LMK-ERGIRKEVP--GC 514
M+ E I+ +V GC
Sbjct: 496 SMRMEYQIKPKVEHYGC 512
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 206/595 (34%), Positives = 303/595 (50%), Gaps = 91/595 (15%)
Query: 41 MRELKEIHTQIIKSPCLQT--NDHHSLITRLLFFCALSVSGSLSYATNVF---SHIKRSD 95
+R++ ++H ++KS + T + HSL+ + S LSYA +F H RS
Sbjct: 76 LRDVPQLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAHLSYAIRLFRLGPHPPRS- 134
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDCLTFPFLLKECTKRLDGL 154
+YNI+IR S H L L+ +ML T +SPD T +K C++ D
Sbjct: 135 ARSYNILIR------SFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLS 188
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLF--------------------------MACGFV 188
VG V K G D FV NS+I ++ M G+V
Sbjct: 189 VGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYV 248
Query: 189 TSA---------------RMLFDEMSNRDVVS------------W--------------- 206
+ R FDE++ V + W
Sbjct: 249 KNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRN 308
Query: 207 --NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
A++ Y + G+LD A LF RM R++ +W+++I+G+ Q R REAL +F EMQ +
Sbjct: 309 LATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTE 368
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
V P+ +T+ SVLSACA LGA++ GKWVH Y+RR L V++GTALVD Y KCGC+
Sbjct: 369 V----NPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCI 424
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
+ A F+ MP ++T WTA+I A NG +EA + F M + P VTF+G+L AC
Sbjct: 425 KDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLAC 484
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+H LVE+GR F M Y + P + HY CM+D+L RAGL EA + IR+MP+EP+ V
Sbjct: 485 SHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVV 544
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
W ALL C +H NVE+GE+ + ++ LDP + Y+ L + YA G++ + R MKE
Sbjct: 545 WRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKE 604
Query: 505 RGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYI 559
+G+ K +PGCS +E++G + EF + S +L I + ++++N YI
Sbjct: 605 KGVEK-IPGCSLIELEGTIFEFFAEDSE---HPQLTEIYEKVHEMIENIKMVGYI 655
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 205/623 (32%), Positives = 320/623 (51%), Gaps = 91/623 (14%)
Query: 6 QMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSL 65
++S + AK +++ L + + +C + + L++IHTQ+I + + N L
Sbjct: 9 HLISRHFTKALAKSQRHAQQTLTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPN---FL 65
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
+ R + + A+ +FS I + Y +NIMIR + N T ++ Y
Sbjct: 66 LHRFIDL------KDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLT-----IEFY 114
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ---------- 175
QM GI P+ T+PF+ C L G + V+K G+C D V+
Sbjct: 115 YQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRC 174
Query: 176 ---------------------NSVISLFMACGFVTSARMLFDEMSNRD------------ 202
NS+IS + G+ A LF EM +
Sbjct: 175 GELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSIL 234
Query: 203 ----------VVSW-----------------NAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
+ SW +A+I Y + GDL A +F RM K+++
Sbjct: 235 GACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVV 294
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
+WN++ITG+ Q G + EA+ LF M+ S V PDKIT+ VLSACA +GA+D GKW+
Sbjct: 295 TWNAMITGYAQNGVSDEAIILFSGMRESGV----NPDKITLVGVLSACASIGALDFGKWL 350
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
Y GL D+ + TAL+DMY KCG ++ A VF++MP+K+ ++W AMIS A +G
Sbjct: 351 DTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRP 410
Query: 356 KEAFDTFREMEAEG--VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
+E+ F+ M EG VRPN ++F+G+LSAC H+GLV++GR F +M + + P + H+
Sbjct: 411 QESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHH 470
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP 473
+CM+D+L+RAG EA I MP +PD V GALLG CQ NV++ E+V L++++P
Sbjct: 471 SCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEP 530
Query: 474 LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPK 533
LN Y+ ++A R+DD + R LM++RG+ K PGCS +E++ VHEF
Sbjct: 531 LNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTK-TPGCSWIEIENQVHEFHAGDVLH 589
Query: 534 VVKEELVLILNGLSKIMKNGGFG 556
+ +++ ++N L++ MK G+G
Sbjct: 590 FISQDMCQVINLLNEEMKVEGYG 612
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 174/472 (36%), Positives = 278/472 (58%), Gaps = 11/472 (2%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A VF I + ++N MI + + + + L+++ML G+ D T L
Sbjct: 191 ARQVFDDISDRTIVSWNSMI------AGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSL 244
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
L +K + +G V+ +V GV D V N++I ++ CG + A+ +FD+M ++DV
Sbjct: 245 LSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDV 304
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
VSW +M+ Y G ++ A+ +F M +N+ SWNSII VQ G+ EA+ELF M S
Sbjct: 305 VSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCIS 364
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
V PD T+ S+LS C+ G + GK H Y+ + + V + +L+DMY KCG
Sbjct: 365 GV----MPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGA 420
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
++ A +F MP+K+ ++W +I AL+G+G+EA + F+ M+A G+ P+ +TF GLLSA
Sbjct: 421 LQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSA 480
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+HSGLV+ GR+ F +M + + P V HYACM+D+L R G EA LI+ MP++PDV
Sbjct: 481 CSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVV 540
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
VWGALLG C+++GN+E+ +++ + L++L N YV L +MY+++ R+DD+KK R +M
Sbjct: 541 VWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMD 600
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ GI+K S +E+DG ++F + + IL+ L +K+ G+
Sbjct: 601 DSGIKK-CRAISFIEIDGCCYQFMVDDKRHCASTGIYSILDQLMDHLKSVGY 651
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 220/474 (46%), Gaps = 99/474 (20%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSL------ITRLLFFCALSV 77
K T L + +D+C +M+ LK +H QII H L + +LL C
Sbjct: 35 KSPTHQTLHHLLDQCSSMKRLKLVHAQIIL---------HGLAAQVVTLGKLLSLCV--Q 83
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G L YA +F I + + + YN +IR S +ND K L L++QM+ G P+
Sbjct: 84 EGDLRYAHLLFDQIPQPNKFMYNHLIRG----YSNSNDPM--KSLLLFRQMVSAGPMPNQ 137
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
TFPF+LK C + V+ Q +K G+ VQN++++ ++AC + SAR +FD+
Sbjct: 138 FTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDD 197
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+S+R +VSWN+MI GY + G D EA+ LF
Sbjct: 198 ISDRTIVSWNSMIAGYSKMGFCD-------------------------------EAILLF 226
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
QEM VE D T+ S+LSA + +D G++VH Y+ +G++ D ++ AL+DM
Sbjct: 227 QEMLQLGVE----ADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDM 282
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK--------------------- 356
Y KCG ++ A VF +M KD ++WT+M++ +A G +
Sbjct: 283 YAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSII 342
Query: 357 ----------EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY-- 404
EA + F M GV P+ T V +LS C+++G + G+ H Y
Sbjct: 343 CCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGK-----QAHCYIC 397
Query: 405 --LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
++ V +ID+ ++ G A + MP E +V W ++G +HG
Sbjct: 398 DNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMP-EKNVVSWNVIIGALALHG 450
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 289/534 (54%), Gaps = 48/534 (8%)
Query: 25 ESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYA 84
++ L L A + K++ E K+IH +K+ + +TRL C + A
Sbjct: 8 KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSC-----NQVVLA 62
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
+F I + +N +IRA A N G + LY ML G+ P+ T+PF+L
Sbjct: 63 RRLFDEIPNPSVILWNQIIRAYA-----WNGPFDGA-IDLYHSMLHLGVRPNKYTYPFVL 116
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
K C+ L G ++ FG+ DVFV +++ + CG + A+ LF MS+RDVV
Sbjct: 117 KACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVV 176
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKK--------------------------------R 232
+WNAMI G G D A+ L +M++ R
Sbjct: 177 AWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVR 236
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
N SW+++I G+V +EAL++F+ MQ S ++ PD T+ VL AC++L A+ HG
Sbjct: 237 NEVSWSAMIGGYVASDCMKEALDIFRMMQLSGID----PDLTTMLGVLPACSHLAALQHG 292
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
HGYL G D +I AL+DMY KCG + A VF M + D ++W AMI + ++
Sbjct: 293 FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIH 352
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
G G EA F ++ A G++P+ +TF+ LLS+C+HSGLV +GR F M + + P + H
Sbjct: 353 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEH 412
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
CM+DIL RAGL EA IR+MP EPDV +W ALL C++H N+ELGE+V++ + L
Sbjct: 413 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 472
Query: 473 PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
P + +V L ++Y+ AGR+DD R K+ G++K +PGCS +E++G+VH F
Sbjct: 473 PESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKK-IPGCSWIEINGIVHAF 525
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 27/347 (7%)
Query: 174 VQNSVISLFMAC---GFVTSARMLFDEM----SNRDVVSWNAMIIGYLRSGDLDVALDLF 226
V+N+ + L AC +T A+ + SN D + + YL + +A LF
Sbjct: 7 VKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLF 66
Query: 227 RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
+ ++ WN II + G A++L+ M + V+P+K T VL AC+ L
Sbjct: 67 DEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSM----LHLGVRPNKYTYPFVLKACSGL 122
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
AI+ G +H + + GL+ DV + TALVD Y KCG + A +F M +D +AW AMI
Sbjct: 123 LAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMI 182
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
+ +L G +A +M+ EG+ PN T VG+L C C + R ++ V
Sbjct: 183 AGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQ----------CLLYARKIFDV 232
Query: 407 E--PHVYHYACMIDILSRAGLFSEAERLIRSMPM---EPDVFVWGALLGGCQMHGNVELG 461
+ ++ MI + EA + R M + +PD+ +L C ++ G
Sbjct: 233 MGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG 292
Query: 462 EKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRNLMKERGI 507
YLI N L DMY+K G+ ++ N M I
Sbjct: 293 FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDI 339
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 166/372 (44%), Positives = 240/372 (64%), Gaps = 6/372 (1%)
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS-NRDVVSWNAMIIGYLRSG 217
++ +V+ G D S++ + +CG V SAR +FDE + + DVVSWN MI GY++SG
Sbjct: 97 LHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKSG 156
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
DL A +LF M RN+ SW +I + Q + EA+E+F+ MQ +E PD + +
Sbjct: 157 DLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIE----PDGVALL 212
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
SVLSAC LG +D G+WVH ++ R GL ++ + A++DMY KCG V++A VF+ M +K
Sbjct: 213 SVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQK 272
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+ WT MI+ FAL+G G EA + FR ME E V PN +TF+ +LS C+H GL + GRW F
Sbjct: 273 SIVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYF 332
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
M Y ++P V HY CMID+L RAG EA LI+ MP + + +WGALL + HG+
Sbjct: 333 KTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGD 392
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
ELGE+ +LI+L+P N Y+ L ++YA+ R+D V++ R M++RG+R VPG SS+
Sbjct: 393 TELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRN-VPGASSI 451
Query: 518 EVDGVVHEFSMK 529
+VDG+VHEF+ +
Sbjct: 452 DVDGMVHEFTSR 463
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 292/514 (56%), Gaps = 23/514 (4%)
Query: 46 EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA 105
+IH+ I KSPCL S + + C G+++ A VF + ++ ++N +I
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDMYSKC-----GNVNDAQQVFDEMGDRNVVSWNSLI-- 225
Query: 106 NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVK 165
+ + + + LK+++ ML + + PD +T ++ C VG V+ +VVK
Sbjct: 226 ----TCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK 281
Query: 166 FG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
+ +D+ + N+ + ++ C + AR +FD M R+V++ +M+ GY + A
Sbjct: 282 MDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARL 341
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
+F +M +RN+ SWN++I G+ Q G EAL LF ++ E V P T A++L ACA
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK----RESVCPTHYTFANILKACA 397
Query: 285 YLGAIDHGKWVH------GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
L + G H G+ +SG + D+ +G +L+DMY KCGCVE Y VF++M ++D
Sbjct: 398 DLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++W AMI FA NGYG EA + FREM G +P+H+T +G+LSAC H+G VE+GR F
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
M + V P HY CM+D+L RAG EA+ +I MP++PD +WG+LL C++H N+
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNI 577
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
LG+ VA+ L +++ N YV L +MYA+ G++ D R LM++ G+ K+ PGCS ++
Sbjct: 578 TLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQ-PGCSWIK 636
Query: 519 VDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
+ G H F +K K+++ +L+ L M+
Sbjct: 637 IPGHAHVFMVKDKSHPRKKQIHSLLDILIAEMRQ 670
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 166/313 (53%), Gaps = 7/313 (2%)
Query: 129 LCTGISPDCLTFPF--LLKECTK-RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
L +S ++ PF LL C K +L + V+ V+K G ++VF+QN +I + C
Sbjct: 9 LAGDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKC 68
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
G + R LFD+M R+V +WN+++ G + G LD A LFR M +R+ +WNS+++GF
Sbjct: 69 GSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFA 128
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
Q R EAL F M +E ++ T AS LSAC+ L ++ G +H + +S
Sbjct: 129 QHDRCEEALYYFAMMH----KEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCL 184
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
DV IG+ALVDMY KCG V A VF EM ++ ++W ++I+ + NG EA F+ M
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVM 244
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
V P+ VT ++SACA ++ G+ + + + + +D+ ++
Sbjct: 245 LESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSR 304
Query: 426 FSEAERLIRSMPM 438
EA + SMP+
Sbjct: 305 IKEARFIFDSMPI 317
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 201/468 (42%), Gaps = 98/468 (20%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L +A +C ++ + +++ ++ + N + +T+L G L A ++F
Sbjct: 61 LIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL---------GFLDEADSLFRS 111
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
+ D T+N M+ A + L + M G + TF L C+
Sbjct: 112 MPERDQCTWNSMVSGFA------QHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGL 165
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
D G ++ + K DV++ ++++ ++ CG V A+ +FDEM +R+VVSWN++I
Sbjct: 166 NDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLI 225
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
T + Q G A EAL++FQ M +E V+
Sbjct: 226 -------------------------------TCYEQNGPAVEALKVFQVM----LESWVE 250
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHG-YLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
PD++T+ASV+SACA L AI G+ VH ++ L D+++ A VDMY KC ++ A
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 330 VFKEMPKKDTLA-------------------------------WTAMISVFALNGYGKEA 358
+F MP ++ +A W A+I+ + NG +EA
Sbjct: 311 IFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV----------EP 408
F ++ E V P H TF +L ACA + G M HV+++ E
Sbjct: 371 LSLFCLLKRESVCPTHYTFANILKACADLADLHLG-----MQAHVHVLKHGFKFQSGEED 425
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
++ +ID+ + G E + R M ME D W A++ G +G
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNG 472
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 190/513 (37%), Positives = 287/513 (55%), Gaps = 52/513 (10%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M + ++H +++K+ ++H + RLL CA S SLSYA ++F I D + +N
Sbjct: 1 MNHIYKLHARLLKT---GHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+IRA+A D+ L L+ +M G+SPD TFPF+LK C + GL ++
Sbjct: 58 TIIRAHA-------DSSPSFSLSLFSKMTMAGVSPDHFTFPFVLKACARLQTGL---DLH 107
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+ K G DV+VQN +I + CGF LD
Sbjct: 108 SLLFKLGFDSDVYVQNGLIHFYGCCGF-------------------------------LD 136
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
AL F M +R++ SW+S+I F + G EAL LFQ MQ VKPD++ + SV+
Sbjct: 137 FALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGT---VKPDEVIVLSVV 193
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SA + LG ++ GKW+ G++ R+GL+ V +GTALVDM+ +CGC+E + VF EM +++ L
Sbjct: 194 SAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVL 253
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
WTA+I+ A++G EA F EM G +P+HVTF G+L AC+H GLV +G F +
Sbjct: 254 TWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESI 313
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
R+ Y +EP HY CM+D+L RAGL +EA + + MP+ P+ +W LLG C H +EL
Sbjct: 314 RNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIEL 373
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
EKV + + +LD + YV L ++Y GR+ + RN M+E+ I K+ PGCS + V+
Sbjct: 374 AEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKK-PGCSLINVN 432
Query: 521 GVVHEFSM--KGSPKV--VKEELVLILNGLSKI 549
++HEF P+ ++E LV +++ L +
Sbjct: 433 HLIHEFVAGDNNHPQFESIREFLVSMIDSLKVV 465
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 166/372 (44%), Positives = 239/372 (64%), Gaps = 6/372 (1%)
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN-RDVVSWNAMIIGYLRSG 217
++ +V+ G D S++ + +CG V SAR +FDE + DVVSWN MI GY++SG
Sbjct: 93 LHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKSG 152
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
DL A +LF M RN+ SW +I + Q + EA+E+F+ MQ +E PD + +
Sbjct: 153 DLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIE----PDGVALL 208
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
SVLSAC LG +D G+WVH ++ R GL ++ + A++DMY KCG V++A VF+ M +K
Sbjct: 209 SVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQK 268
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+ WT MI+ FAL+G G EA + FR ME E V PN +TF+ +LS C+H GL + GRW F
Sbjct: 269 SIVTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYF 328
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
M Y ++P V HY CMID+L RAG EA LI+ MP + + +WGALL + HG+
Sbjct: 329 KTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGD 388
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
ELGE+ +LI+L+P N Y+ L ++YA+ R+D V++ R M++RG+R VPG SS+
Sbjct: 389 TELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRN-VPGASSI 447
Query: 518 EVDGVVHEFSMK 529
+VDG+VHEF+ +
Sbjct: 448 DVDGMVHEFTSR 459
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 187/483 (38%), Positives = 279/483 (57%), Gaps = 49/483 (10%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK---CLKLYKQMLCTG 132
++ G L A +F I D ++N MI A SG+ L +++M
Sbjct: 209 TLRGCLDDARRLFEEIPVRDAVSWNAMIAGYA---------QSGRFEEALAFFQEMKRAN 259
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
++P+ T +L C + G+ G V+ + D G ++ R
Sbjct: 260 VAPNESTMVTVLSACAQS-----GSLELGNWVRSWIEDH--------------GLGSNLR 300
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
++ NA+I Y + GDLD A DLF + +++I SWN +I G+ +E
Sbjct: 301 LV------------NALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD-CDVVIG 311
AL LF++MQ S+VE P+ +T S+L ACAYLGA+D GKW+H Y+ + L + +
Sbjct: 349 ALALFRKMQQSNVE----PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLW 404
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
T+L+DMY KCG +E A VF M K +W AMIS A++G+ A + FR+M EG
Sbjct: 405 TSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFE 464
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ +TFVG+LSAC+H+GLVE GR CF M Y + P + HY CMID+L RAGLF EAE
Sbjct: 465 PDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEA 524
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
L+++M M+PD +WG+LLG C++HGNVELGE A++L +L+P N YV L ++YA AGR
Sbjct: 525 LMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGR 584
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+DDV + R + ++G++K VPGCSS+EVD VVHEF + +++ +L+ + ++++
Sbjct: 585 WDDVARIRTKLNDKGMKK-VPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLE 643
Query: 552 NGG 554
G
Sbjct: 644 KAG 646
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 262/469 (55%), Gaps = 28/469 (5%)
Query: 15 SPAKVSPP-------NKESTKLILRNA-----IDECKNMRELKEIHTQIIKSPCLQTNDH 62
SP+ V PP + +L+N + CK+ + LK+IH+QIIK+ T
Sbjct: 7 SPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNT--- 63
Query: 63 HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
+++L+ FCA+S G+LSYA +F I++ + + +N MIR N+ SS +
Sbjct: 64 QFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVG------AI 117
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
Y +ML G+ P+ TFPFLLK C K G ++G V+K G+ D FV S+I+++
Sbjct: 118 DFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMY 177
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
G + A ++F + S RD VS+ A+I GY G LD A LF + R+ SWN++I
Sbjct: 178 AQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIA 237
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
G+ Q GR EAL FQEM+ ++V P++ T+ +VLSACA G+++ G WV ++
Sbjct: 238 GYAQSGRFEEALAFFQEMKRANV----APNESTMVTVLSACAQSGSLELGNWVRSWIEDH 293
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA-LNGYGKEAFDT 361
GL ++ + AL+DMY KCG +++A +F+ + +KD ++W MI ++ +N Y KEA
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSY-KEALAL 352
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR+M+ V PN VTFV +L ACA+ G ++ G+W + +L + + +ID+ +
Sbjct: 353 FRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYA 412
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
+ G A+++ M + + W A++ G MHG+ + ++ + + D
Sbjct: 413 KCGNIEAAKQVFAGMKPK-SLGSWNAMISGLAMHGHANMALELFRQMRD 460
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 66/348 (18%)
Query: 61 DHHSLITRLLFFCAL----SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDT 116
+ H L + L AL S G L A ++F I D+ ++N+MI + +S
Sbjct: 291 EDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK--- 347
Query: 117 HSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQV-VKFGVCDDVFVQ 175
+ L L+++M + + P+ +TF +L C +G ++ + KF + +
Sbjct: 348 ---EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLW 404
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
S+I ++ CG + +A+ +F M + + SWNAMI G G ++AL+LFR+M+
Sbjct: 405 TSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMR----- 459
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
+E +PD IT VLSAC++ G ++ G+
Sbjct: 460 ------------------------------DEGFEPDDITFVGVLSACSHAGLVELGRQC 489
Query: 296 HGYLRRSGLDCDVVIGTA----LVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFA 350
+ D D+ ++D+ G+ G + A + K M K D W +++
Sbjct: 490 FSSMVE---DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACR 546
Query: 351 LNG---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
++G G+ A E+E E P + + A A GRW
Sbjct: 547 VHGNVELGEFAAKHLFELEPE--NPGAYVLLSNIYATA-------GRW 585
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 185/519 (35%), Positives = 288/519 (55%), Gaps = 48/519 (9%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C+N E K+IH K + + + C G L A VF ++ +
Sbjct: 98 CRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNC-----GCLVSARKVFDKMEDKTVV 152
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLTFPFLLKECTKRLDGLVG 156
++ MI +A + + N+ ++L+ +M+ + P+ +T +L C + D +
Sbjct: 153 SWATMIGVHA-QWDQPNEA-----VRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMV 206
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++ + + G V + ++ ++ CG V AR
Sbjct: 207 KRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLAR------------------------ 242
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
DLF + +++N+FSWN +I G V+ EAL LF+EMQ+ + K DK+T+
Sbjct: 243 -------DLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGI----KGDKVTM 291
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
AS+L AC +LGA++ GKW+H Y+++ +D DV +GTALVDMY KCG +E A VF EMP+
Sbjct: 292 ASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPE 351
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD + WTA+I A+ G + A F EM +GV+P+ +TFVG+L+AC+H+G V++G
Sbjct: 352 KDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISH 411
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F M Y ++P + HY ++DIL RAG +EAE LI+SMPM PD FV G LLG C++HG
Sbjct: 412 FNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHG 471
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
N+E E+ A+ L+++DP + YV L ++Y + ++++ K+TR LM ERG+RK PGCS
Sbjct: 472 NLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKP-PGCSQ 530
Query: 517 VEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+EV GVVHEF S E+ +L + +KN G+
Sbjct: 531 IEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGY 569
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 206/423 (48%), Gaps = 56/423 (13%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M +LK+IH Q++++ ++++ FC+L SGSL YA VFS I YT N
Sbjct: 1 MSQLKQIHAQMLRTGLFFDP---FTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+IR C T+ + L Y++M+ G+ PD TFP L K C +G ++
Sbjct: 58 SIIRG--C----TDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSEG---KQIH 108
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
K G D + QN++++++ CG + SAR +FD
Sbjct: 109 CHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFD------------------------ 144
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
+M+ + + SW ++I Q + EA+ LF M S E VKP+++T+ +VL
Sbjct: 145 -------KMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKS---ENVKPNEVTLVNVL 194
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
+ACA + K +H Y+ G VV+ T L+D+Y KCGCV+ A +F + +K+
Sbjct: 195 TACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLF 254
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+W MI+ + +EA FREM+ +G++ + VT LL AC H G +E G+W
Sbjct: 255 SWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWL---- 310
Query: 401 RHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
H Y+ ++ V ++D+ ++ G A ++ MP E DV W AL+ G M G
Sbjct: 311 -HAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-EKDVMTWTALILGLAMCG 368
Query: 457 NVE 459
E
Sbjct: 369 QAE 371
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 169/458 (36%), Positives = 273/458 (59%), Gaps = 15/458 (3%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
+ YA VF + D+ +++ MIR S + + L+L ++M + P +
Sbjct: 175 VEYARLVFDKMMERDVVSWSTMIR------SLSRNKEFDMALELIREMNFMQVRPSEVAM 228
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS--VISLFMACGFVTSARMLFDEM 198
++ + +G +++ V++ + + V + ++ ++ CG + AR LF+ +
Sbjct: 229 VSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGL 288
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+ + VVSW AMI G +RS L+ A LF + R++ W ++++ + Q +A LF
Sbjct: 289 TQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFD 348
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+M++S V +P K+TI S+LS CA GA+D GKWVH Y+ + ++ D ++ TALVDMY
Sbjct: 349 QMRTSGV----RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMY 404
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + A +F E +D W A+I+ FA++GYG+EA D F EME +GV+PN +TF+
Sbjct: 405 AKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFI 464
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
GLL AC+H+GLV +G+ F M H + + P + HY CM+D+L RAGL EA +I+SMP+
Sbjct: 465 GLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPI 524
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+P+ VWGAL+ C++H N +LGE A L++++P N + V + ++YA A R+ D
Sbjct: 525 KPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGV 584
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSM--KGSPKV 534
R MK G++KE PG S +EV+G VHEF M + P++
Sbjct: 585 RKTMKTVGMKKE-PGHSVIEVNGTVHEFLMGDQSHPQI 621
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 209/493 (42%), Gaps = 116/493 (23%)
Query: 3 KKLQMVSYSLL--NSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTN 60
++LQ +S L N +PP S + + + K+IH IIK T+
Sbjct: 24 QQLQHHPHSTLKFNPTPLQTPPTSPSQH--------DLSTLEQTKQIHAHIIK-----TH 70
Query: 61 DHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
HH+L L F + +S S + + S+ KR+
Sbjct: 71 FHHALQIPLNDFPS-GLSPSAQWNFVITSYTKRN----------------------QPRN 107
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L +Y Q+ D P +LK C + +G ++G V+K G+ DVFV N+++
Sbjct: 108 ALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALML 167
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
++ C V AR++FD+M RDVVSW+ MI R+ + D+AL+L R M
Sbjct: 168 MYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM----------- 216
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
F+Q V+P ++ + S+++ A + GK +H Y+
Sbjct: 217 --NFMQ----------------------VRPSEVAMVSMVNLFADTANMRMGKAMHAYVI 252
Query: 301 RSGLD--CDVVIGTALVDMYGKC--------------------------GCV-----ERA 327
R+ + V TAL+DMY KC GC+ E A
Sbjct: 253 RNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEA 312
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
+F +D + WTAM+S +A +AF+ F +M GVRP VT V LLS CA +
Sbjct: 313 RALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVA 372
Query: 388 GLVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
G ++ G+W H Y+ VE ++D+ ++ G + A RL + D+
Sbjct: 373 GALDLGKWV-----HSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDIC 426
Query: 444 VWGALLGGCQMHG 456
+W A++ G MHG
Sbjct: 427 MWNAIITGFAMHG 439
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
WN +IT + + + R AL ++ +++ E D SVL AC + GK +
Sbjct: 91 QWNFVITSYTKRNQPRNALNVYAQLRKMDFEV----DNFMAPSVLKACGQVSWTQLGKEI 146
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
HG++ + GLD DV +G AL+ MYG+C CVE A VF +M ++D ++W+ MI + N
Sbjct: 147 HGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEF 206
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH------ 409
A + REM VRP+ V V +++ A + + G+ H Y++
Sbjct: 207 DMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGK-----AMHAYVIRNSNNEHMG 261
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI 469
V ++D+ ++ G A +L + + V W A++ GC +E +
Sbjct: 262 VPTTTALLDMYAKCGHLGLARQLFNGL-TQKTVVSWTAMIAGCIRSNRLEEARALFDSTQ 320
Query: 470 DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
+ D + + + YA+A D + M+ G+R
Sbjct: 321 NRDVM---IWTAMLSAYAQANCIDQAFNLFDQMRTSGVR 356
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/523 (35%), Positives = 291/523 (55%), Gaps = 33/523 (6%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C R+L H ++ CL + + + T+++ C + G ++A VF+H+ +L+
Sbjct: 20 CATFRDLLRAHGLAVRL-CLSQSSY--VATQIVHVC--NGHGRAAHAARVFAHVPAPNLH 74
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP---------DCLTFPFLLKECT 148
+N MI+A A N H +++Y +ML P D T+PFLLK C
Sbjct: 75 LHNAMIKAYA-----QNHLHR-DAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACG 128
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+G V+ V + G VQNS+I ++ CG ++ AR +FD M +D VSWN
Sbjct: 129 GLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSWNT 188
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+I + R G + A +LF M + + SW ++++G+ G A+E+F++MQ E
Sbjct: 189 LISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFE-- 246
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
PD ++I +VL ACA LGA++ G+W++ Y + G+ + I AL++MY KCGC+E A
Sbjct: 247 --PDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEAL 304
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHS 387
+F M +KD ++W+ I A +G +EA F M+ EG V PN +TFVGLLSAC+H+
Sbjct: 305 QLFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHA 364
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GL+++G F M+ Y VEP V HY C++D+L R+G A I MP+ PD +WG+
Sbjct: 365 GLLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGS 424
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
LL C+ H +V+ A+ L++L+P + V L ++YA AGR+ +V TR ++ R
Sbjct: 425 LLSACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRST 484
Query: 508 RKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
RK PGCS +EVD VV EF V E+L L G++ I+
Sbjct: 485 RK-TPGCSMIEVDNVVREF-------VAGEDLGPELGGIAAII 519
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/539 (36%), Positives = 308/539 (57%), Gaps = 36/539 (6%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS-GSLSYATNVFSHIKR 93
+ C + R L +IH QI+ S Q N ++ LL +L +S GSL A VF I
Sbjct: 34 LKSCVSFRNLAKIHAQIVVSGFSQKN---YILNHLL---SLYISFGSLGSAQKVFEDITA 87
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+N +I+ + T S K ++L+K+M G+ + T+ FLL C +
Sbjct: 88 PSTTVWNQIIKGH------TRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLF 141
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF-----VTSARMLFDEMSNRDVVSWNA 208
G ++G+V+ G +++V+ ++I+L+ G + AR LFDEM + +VV WN+
Sbjct: 142 REGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNS 201
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
++ GY+R GD D A +F M +RN+ +W ++ GF Q G+ + AL LF +M+ + VE
Sbjct: 202 LLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVE-- 259
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG----LDCDVVIGTALVDMYGKCGCV 324
D++ + + LSACA LG + GKW+HGY+ R+ L V + AL+ MY CG +
Sbjct: 260 --LDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVM 317
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG---VRPNHVTFVGLL 381
+ AY VF+E+P+++T++W+++I+ FA G G EA F+ M G VRP+ +TF+G L
Sbjct: 318 DLAYKVFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGAL 377
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
+AC+H+GL+ G F M + V P + HY CM+D+LSRAGL +EA LI SMPM+P+
Sbjct: 378 TACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPN 437
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYL-IDLDPLNHA--FYVNLCDMYAKAGRFDDVKKT 498
VWGALL GC++H N E+ VA++L ++ P N A +++ L ++YA GR+ D
Sbjct: 438 NAVWGALLSGCRLHKNDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATV 497
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQ 557
R M + G++K G S +E++GV+ F M G +++ LI L I + G+
Sbjct: 498 RRNMHDIGVKKP-SGRSWIEINGVLCSF-MVGEE--THKDVNLIYEMLGNITRQTQMGE 552
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/498 (38%), Positives = 283/498 (56%), Gaps = 55/498 (11%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C NMR+ K IH I + L N++ I++L+ FCALS SGSLSYA+ +FS I+ +L+
Sbjct: 14 CSNMRQFKAIHALFIVNG-LHLNNY--AISKLISFCALSNSGSLSYASLIFSQIQNPNLF 70
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLC--TGISPDCLTFPFLLKECTKRLDGLV 155
YN +IRA + S+ H Y Q++ + PD TFPF++ CT L L+
Sbjct: 71 AYNTLIRAYSRSSTPQLALH-------YFQLMLDDENVGPDQHTFPFIISACTNSLWMLL 123
Query: 156 GASVYGQVVKFGVCD-DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G ++ V+K GV D VQ +++ + C + AR LFDE+ N DVV
Sbjct: 124 GKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQ--------- 174
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
WN ++ G+V+ G A EAL F+ M S VE PD+
Sbjct: 175 ----------------------WNVLLNGYVRRGLAPEALNAFRNMLVSGVE----PDEF 208
Query: 275 TIASVLSACAYLGAIDHGKWVHGYL-RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+ + L CA LGA+ GKW+H Y+ +R L+ DV IGTALVDMY KCGC++R+ VF+
Sbjct: 209 CLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEG 268
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEK 392
M K++ +W+AMI FAL+G+ ++A M+ E G+RP+ V +G++ ACAH+GL E+
Sbjct: 269 MTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEE 328
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G++ M Y + P HY+CM+D+L RAG EA +LIR MPM+P VWGALL GC
Sbjct: 329 GQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGC 388
Query: 453 QMHGNVELGEKVAQYLIDL----DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
+ H NV+L E A+ L+ + YV L ++Y A + +D + R ++ ++ I+
Sbjct: 389 RTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIK 448
Query: 509 KEVPGCSSVEVDGVVHEF 526
+ PGCS +EV+G V++F
Sbjct: 449 TK-PGCSLIEVEGEVNQF 465
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 273/477 (57%), Gaps = 42/477 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G+++ A +F + D+ ++N +I + S + L + +M GI P+ +
Sbjct: 270 GNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHH------EALAFFNRMQVRGIKPNSI 323
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C G ++G ++ G F N V+
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRSG-----FESNDVVG------------------ 360
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
NA++ Y + G+++ A LF RM K+N+ +WN+II+G+ Q G EAL LF
Sbjct: 361 --------NALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFI 412
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ+ + KPD I SVL ACA+ A++ GK +HGY RSG + +VV+GT LVD+Y
Sbjct: 413 EMQAQGI----KPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIY 468
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG V A +F+ MP++D ++WT MI + ++G+G++A F +M+ G + +H+ F
Sbjct: 469 AKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFT 528
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+L+AC+H+GLV++G F M+ Y + P + HYAC++D+L RAG EA +I++M +
Sbjct: 529 AILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSL 588
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EPD VWGALLG C++H N+ELGE+ A++L +LDP N +YV L ++YA+A R++DV K
Sbjct: 589 EPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKL 648
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R +MKE+G++K+ PGCS V V V F + E++ +L L + M+ G+
Sbjct: 649 RKMMKEKGVKKQ-PGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGY 704
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 209/432 (48%), Gaps = 81/432 (18%)
Query: 103 IRANACKSSET-----NDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
IR NA ET + K L+LY QM TGI+PD L F ++K C + D G
Sbjct: 81 IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
V+ ++ G DV V ++ S++ CG + +AR +FD M RDVVSWNA+I GY ++G
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200
Query: 218 DLDVALDLFRRMK---------------------------------------KRNIFSWN 238
AL LF M+ + ++ N
Sbjct: 201 QPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVN 260
Query: 239 SIITGFVQGGRAREALELFQEMQSSSVEEM---------------------------VKP 271
++ + + G A +LF+ M V +KP
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKP 320
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
+ IT+ SVL ACA+L A++ G+ +HGY RSG + + V+G ALV+MY KCG V AY +F
Sbjct: 321 NSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLF 380
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+ MPKK+ +AW A+IS ++ +G+ EA F EM+A+G++P+ V +L ACAH +E
Sbjct: 381 ERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALE 440
Query: 392 KGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
+G+ H Y + E +V ++DI ++ G + A++L MP E DV W
Sbjct: 441 QGKQI-----HGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTT 494
Query: 448 LLGGCQMHGNVE 459
++ +HG+ E
Sbjct: 495 MILAYGIHGHGE 506
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/487 (36%), Positives = 285/487 (58%), Gaps = 20/487 (4%)
Query: 36 DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSD 95
++C +MR K IH ++ CL + H ++ +L F A+S G LSYA N+F + +
Sbjct: 15 EKCISMRNFKLIHAHAFRT-CL--HQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPT 71
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
+ YN +IRA++ ++ + + + +M I+PD +F FLLK ++ +
Sbjct: 72 TFFYNTLIRAHSHSTTPSFSS------LFFNRMRRNSIAPDEFSFTFLLK--SRSFTMPL 123
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS----NRDVVSWNAMII 211
++G V KFG C + VQN++I L+ G SAR +F++ + D+VSW+ +++
Sbjct: 124 VHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLV 183
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
+ ++G+LDVA +F M +R++ SW +++ + + R E L+LFQEM+ + V P
Sbjct: 184 AHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGV----WP 239
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
D++T+ SV+SACA LG + G+ VH ++ +G V + +L+DMYGKCGC+E A+ VF
Sbjct: 240 DEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVF 299
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+K + W AM+ V A +GY ++AF F M GV P+ VT + LL A AH G V+
Sbjct: 300 DRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVD 359
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+G F M+ Y VEP + HY ++D+L R+G EA L+ SMP+ + +WGALLG
Sbjct: 360 EGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGA 419
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C++HG+V +GE+V + L++L P +Y+ L D+Y AGR + + R M G RK
Sbjct: 420 CRIHGDVGMGERVIKKLLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKN- 478
Query: 512 PGCSSVE 518
PGCS VE
Sbjct: 479 PGCSWVE 485
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 193/550 (35%), Positives = 312/550 (56%), Gaps = 29/550 (5%)
Query: 9 SYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITR 68
S S+ +P + PN ++ L+L ++ + L++IH Q++ Q ++ +T
Sbjct: 59 SISIPTNPIPIDLPNPQTFSLLL----NQRPKLSPLQQIHAQVVT----QALSSNASLTA 110
Query: 69 LLFFCALSVSGSLSYATNVFSHIKRSD--LYTYNIMIRANACKSSETNDTHSGKCLKLYK 126
L C L + A +F H + +N+MIR + + +S + + L+
Sbjct: 111 SLIHCYLCAKNHPN-ARILFDHYPSPSPPIKLWNVMIR------TYSKIRNSQEPIHLFL 163
Query: 127 QMLCTG----ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
+ML + PD TF F++ C+ ++ + G V+G VVK G +++V NSVI++
Sbjct: 164 RMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMC 223
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
+ AR +F++MS RDV SW +++ GY + G++D A +LF M RN SW +I+
Sbjct: 224 SVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMIS 283
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
GF+ GR EAL F M ++ V P++ + VLSACA+LGA+D G W+H Y+ +
Sbjct: 284 GFLGCGRYPEALTFFCNML---CDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKI 340
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
G+ I TAL+DMY KCG ++ A VF + K+D L++T+MIS + +G GK+A F
Sbjct: 341 GIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVF 400
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
+M E V PN +T +G+L+ C+HSGLVE+G M ++ + P + HY C ID+L R
Sbjct: 401 YQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANMESLWGIAPKIEHYGCYIDLLGR 460
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH-AFYVN 481
AG A ++++MPMEPD+ +W ALL ++H NV LGE++ ++ L +H V
Sbjct: 461 AGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNLGEQIISHIGQLKSSDHNGGEVL 520
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
L ++YA GR++ V + R LM +R + PGCS +EV+G+VHEF + + ++V
Sbjct: 521 LSNLYASLGRWERVTEMRKLMVDRR-SESSPGCSWIEVNGLVHEFRVADQ---LHPQIVE 576
Query: 542 ILNGLSKIMK 551
I N L++I+K
Sbjct: 577 IRNKLNEILK 586
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/517 (35%), Positives = 295/517 (57%), Gaps = 54/517 (10%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK-LYKQMLCTGISPDC 137
G +S + F I + D+Y +N MI S+ ++ H + + Y+ +L + I PD
Sbjct: 65 GDVSLSRCTFDQIPQKDVYAWNSMI------SAYVHNGHFHEAIGCFYQLLLVSEIRPDF 118
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
TFP +LK C +DG ++ K G +VFV S+I ++ GF AR LFD+
Sbjct: 119 YTFPPVLKACGTLVDG---RKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDD 175
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK--------------------------- 230
M RD+ SWNAMI G +++G+ ALD+ M+
Sbjct: 176 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGL 235
Query: 231 ------------KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+++ SWN++ITG+ Q G A EA+E+++ M+ +E++ P++ T S
Sbjct: 236 LDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEE--CKEII-PNQGTWVS 292
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+L A A++GA+ G +HG + ++ L DV + T L+D+YGKCG + A +F ++P++
Sbjct: 293 ILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQES 352
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++ W A+IS ++G+ ++ F EM EGV+P+HVTFV LLSAC+HSG VE+G+WCF
Sbjct: 353 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR 412
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+M+ Y ++P + HY CM+D+L RAG A I+ MP++PD +WGALLG C++HGN+
Sbjct: 413 LMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNI 471
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
ELG+ + L ++D N +YV L ++YA G+++ V K R+L +ERG++K PG S++E
Sbjct: 472 ELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKK-TPGWSTIE 530
Query: 519 VDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
V+ V F +E+ L L+ MK+ G+
Sbjct: 531 VNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGY 567
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 187/422 (44%), Gaps = 58/422 (13%)
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+ F FL TK ++ +V G +F+ +++L+ G V+ +R FD+
Sbjct: 20 IDFNFLFDSSTKTP---FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQ 76
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM------------------------KKRN 233
+ +DV +WN+MI Y+ +G A+ F ++ R
Sbjct: 77 IPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRK 136
Query: 234 I--------FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY 285
I F WN + + +R F + S ++M D + +++S
Sbjct: 137 IHCWAFKLGFQWNVFVAASLIHMYSRFG---FTGIARSLFDDMPFRDMGSWNAMISGLIQ 193
Query: 286 LGAIDHGKWVHGYLRRSGLDCDVV----IGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
G V +R G+ + V I VDMY K G ++ A+ VF+ +P KD ++
Sbjct: 194 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVIS 253
Query: 342 WTAMISVFALNGYGKEAFDTFREMEA-EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
W +I+ +A NG EA + ++ ME + + PN T+V +L A AH G +++G M
Sbjct: 254 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG-----MK 308
Query: 401 RHVYLVEPH----VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
H +++ + V+ C+ID+ + G +A L +P E V W A++ +HG
Sbjct: 309 IHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV-TWNAIISCHGIHG 367
Query: 457 NVELGEKVAQYLID--LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP-- 512
+ E K+ ++D + P +H +V+L + +G ++ K LM+E GI+ +
Sbjct: 368 HAEKTLKLFGEMLDEGVKP-DHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHY 426
Query: 513 GC 514
GC
Sbjct: 427 GC 428
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 151/321 (47%), Gaps = 31/321 (9%)
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y GD+ ++ F ++ ++++++WNS+I+ +V G EA+ F ++ S ++PD
Sbjct: 61 YANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVS---EIRPD 117
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
T VL AC G + G+ +H + + G +V + +L+ MY + G A +F
Sbjct: 118 FYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 174
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC----AHSG 388
+MP +D +W AMIS NG +A D EM EG++ N VT V +L A G
Sbjct: 175 DMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLG 234
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM----PMEPDVFV 444
L++ F ++ V + +I ++ GL SEA + + M + P+
Sbjct: 235 LLDSAHKVFEIIP-----VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGT 289
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC--DMYAKAGRFDDVKKTRNLM 502
W ++L G ++ G K+ +I + L+ +V C D+Y K GR L+
Sbjct: 290 WVSILPAYAHVGALQQGMKIHGRVIKTN-LHLDVFVATCLIDVYGKCGR---------LV 339
Query: 503 KERGIRKEVPGCSSVEVDGVV 523
+ +VP SSV + ++
Sbjct: 340 DAMSLFYQVPQESSVTWNAII 360
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/498 (38%), Positives = 283/498 (56%), Gaps = 55/498 (11%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C NMR+ K IH I + L N++ I++L+ FCALS SGSLSYA+ +FS I+ +L+
Sbjct: 14 CSNMRQFKAIHALFIVNG-LHLNNY--AISKLISFCALSNSGSLSYASLIFSQIQNPNLF 70
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLC--TGISPDCLTFPFLLKECTKRLDGLV 155
YN +IRA + S+ H Y Q++ + PD TFPF++ CT L L+
Sbjct: 71 AYNTLIRAYSRSSTPQLALH-------YFQLMLDDENVGPDQHTFPFIISACTNSLWMLL 123
Query: 156 GASVYGQVVKFGVCD-DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G ++ V+K GV D VQ +++ + C + AR LFDE+ N DVV
Sbjct: 124 GKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQ--------- 174
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
WN ++ G+V+ G A EAL F+ M S VE PD+
Sbjct: 175 ----------------------WNVLLNGYVRRGLAPEALNAFRNMLVSGVE----PDEF 208
Query: 275 TIASVLSACAYLGAIDHGKWVHGYL-RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+ + L CA LGA+ GKW+H Y+ +R L+ DV IGTALVDMY KCGC++R+ VF+
Sbjct: 209 CLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEG 268
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEK 392
M K++ +W+AMI FAL+G+ ++A M+ E G+RP+ V +G++ ACAH+GL E+
Sbjct: 269 MTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEE 328
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G++ M Y + P HY+CM+D+L RAG EA +LIR MPM+P VWGALL GC
Sbjct: 329 GQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGC 388
Query: 453 QMHGNVELGEKVAQYLIDL----DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
+ H NV+L E A+ L+ + YV L ++Y A + +D + R ++ ++ I+
Sbjct: 389 RTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIK 448
Query: 509 KEVPGCSSVEVDGVVHEF 526
+ PGCS +EV+G V++F
Sbjct: 449 TK-PGCSLIEVEGEVNQF 465
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/511 (34%), Positives = 293/511 (57%), Gaps = 21/511 (4%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M ELK+IH ++K + L+T+++ C + G YA +F + + + YN
Sbjct: 1 MVELKKIHAHVVK---FSLSXSSFLVTKMVDMC--NHHGETEYANLLFKRVADPNAFLYN 55
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLC-----TGISPDCLTFPFLLKECTKRLDGLV 155
MIRA + N + + ++KQML PD TFPF++K C + +
Sbjct: 56 AMIRA-----YKHNKVYI-LAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNL 109
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G V+G KFG + ++NS++ +++ C + A +F+EM+ RD VSWN +I G++R
Sbjct: 110 GKQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVR 169
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
G + A +F ++ + IFSW +I++G+ + G ALE F+ MQ +E D+I+
Sbjct: 170 LGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIE----LDEIS 225
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ SVL ACA LGA++ GKW+H Y ++G D+ + AL+++Y K G ++ +F +M
Sbjct: 226 LVSVLPACAQLGALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMN 285
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
++D ++W+ MI A +G +EA + F+EM+ V PN +TFVGLLSACAH+GL+ +G
Sbjct: 286 ERDVISWSTMIVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLG 345
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M +EP V HY C++++L +G +A LI+ MPM+PD +WG L C+ H
Sbjct: 346 YFESMERDDNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSH 405
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
GN+E+ ++L++L+P + Y+ L ++YA G++D V + R LM + + K PGCS
Sbjct: 406 GNLEIVAIAMEHLLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNK-TPGCS 464
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
S+EVD +V E++ K + + +L L
Sbjct: 465 SIEVDNMVQEYASGDDSKPFSKAIYRVLKLL 495
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/436 (41%), Positives = 262/436 (60%), Gaps = 5/436 (1%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L+ Y +M G+ D T PF+LK C +G V+GQ ++ G+ D +V S+I +
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
++ CG + AR LFD+M RD+ SWNA+I GY++ G++ VA DLF RM+ RNI SW ++I
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
+G+ Q G A +AL LF EM E +KP+ +TI SVL ACA A++ G+ +H +
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSE--MKPNWVTIVSVLPACAQSAALERGRRIHDFANG 269
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK--KDTLAWTAMISVFALNGYGKEAF 359
GL + + TAL MY KC + A F + + K+ +AW MI+ +A +G G EA
Sbjct: 270 IGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAV 329
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
F M GV+P+ VTF+GLLS C+HSGL++ G F M ++ VEP V HYAC++D+
Sbjct: 330 SIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDL 389
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFY 479
L RAG EA+ LI MPM+ VWGALL C+ H N+E+ E A+ L L+P N Y
Sbjct: 390 LGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNY 449
Query: 480 VNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEEL 539
V L ++YA+AG +++VKK R L+K +G++K PGCS +E++G H F +E+
Sbjct: 450 VLLSNLYAEAGMWEEVKKLRALLKYQGMKKS-PGCSWIEINGKSHLFMGADKSHPQAKEI 508
Query: 540 VLILNGLSKIMKNGGF 555
L L + +K G+
Sbjct: 509 YKFLEALPEKIKMAGY 524
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/580 (33%), Positives = 296/580 (51%), Gaps = 77/580 (13%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
CKN L +I QI+ + L+ ND F S + +A +F I + +
Sbjct: 22 CKNYERLHQIQAQIV-THGLEHND----FVAPNFITTCSRFKRIHHARKLFDKIPQPNTA 76
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK-------- 149
T+N M R + H + L+ ++ P+C TFP ++K C K
Sbjct: 77 TWNAMFRG------YLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGE 130
Query: 150 -----------RLDGLVGASVYGQVVKFGVCDDVF------------VQNSVISLFMACG 186
+ + V S+ K G +D + V ++I+ ++ CG
Sbjct: 131 EVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCG 190
Query: 187 FVTS-------------------------------ARMLFDEMSNRDVVSWNAMIIGYLR 215
V S AR LFD+M NRD +SWNAM+ GY
Sbjct: 191 DVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAV 250
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
+G++++ +F M +RN+FSWN +I G+V+ G E LE F+ M VE V P+ T
Sbjct: 251 NGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRML---VEGHVIPNDFT 307
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ +VLSAC+ LGA+D GKWVH Y G ++ +G L+DMY KCG +E A VF +
Sbjct: 308 LVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLD 367
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+KD ++W +I+ A++G+ +A F M++EG P+ VTFVG+LSAC H GLV+ G
Sbjct: 368 RKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFL 427
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M Y + P + HY CM+D+L RAGL +A IR MP+EPD +W ALLG C+++
Sbjct: 428 YFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLY 487
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
NVE+ E Q LI+L+P N A +V + ++Y GR +DV + + M++ G RK +PGCS
Sbjct: 488 KNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRK-LPGCS 546
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+E + V EF E + +L GL+ ++++ G+
Sbjct: 547 VIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLRSHGY 586
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 294/543 (54%), Gaps = 69/543 (12%)
Query: 42 RELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNI 101
+E++++H +K+ +H + +RLL + L YA ++F I+R L +N
Sbjct: 27 QEVEQLHAFSLKTAIF---NHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNT 83
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
+I+ E +H G + L+ +++ + PD T P ++K C + G ++G
Sbjct: 84 IIKCYV----ENQFSHDG--IVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHG 136
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
+K G DVFVQ S+++++ CG + AR +FD M ++DVV WN++I GY R G++D+
Sbjct: 137 LALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDI 196
Query: 222 ALDLFRRMKKR-------------------------------NIFSWNSIITGFVQGGRA 250
AL LF M +R N+ SWN++I G+++ G
Sbjct: 197 ALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDF 256
Query: 251 REALELFQEM-------------------QSSSVEEMV--------KPDKITIASVLSAC 283
ALELF +M Q +M +P T+ SVLSA
Sbjct: 257 DSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAV 316
Query: 284 AYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWT 343
+ L + G+W+H Y+ ++G + D ++GT+L++MY KCGC+E A VF+ + KK WT
Sbjct: 317 SGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWT 376
Query: 344 AMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV 403
A+I ++G A F EM G++PN + F+G+L+AC H+GLV+ GR F MM +
Sbjct: 377 AIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNE 436
Query: 404 YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEK 463
Y +EP + HY C++DIL RAG EA+ I +MP+ P+ +W +LLGG + HG +++GE
Sbjct: 437 YKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEY 496
Query: 464 VAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVV 523
AQ +I++ P Y+ L +MYA +G ++ V R +M +RG RK+ PGCSSVE G +
Sbjct: 497 AAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKD-PGCSSVEHKGTL 555
Query: 524 HEF 526
HEF
Sbjct: 556 HEF 558
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 143/375 (38%), Gaps = 55/375 (14%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
P + +L + + +C + +++ Q+ PC +++I + SG
Sbjct: 205 PERDAFSWTVLVDGLSKCGKVESARKLFDQM---PCRNLVSWNAMINGYM------KSGD 255
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
A +F + DL T+N+MI + +K++ ML G P T
Sbjct: 256 FDSALELFYQMPIWDLVTWNLMIAGYELNGQFMD------AVKMFFMMLKLGSRPSHATL 309
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
+L + G ++ + K G D + S+I ++ CG + SA +F +
Sbjct: 310 VSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQK 369
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
+ V W A+I+G L + G A AL LF EM
Sbjct: 370 KKVGHWTAIIVG------LGIH-------------------------GMANHALALFLEM 398
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGK-WVHGYLRRSGLDCDVVIGTALVDMYG 319
+ +KP+ I VL+AC + G +D G+ + + ++ + LVD+
Sbjct: 399 CKTG----LKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILC 454
Query: 320 KCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
+ G +E A + MP + + W +++ +GK + V P +
Sbjct: 455 RAGHLEEAKNTIENMPISPNKVIWMSLLG--GSRNHGKIDIGEYAAQRVIEVAPETIGCY 512
Query: 379 GLLSAC-AHSGLVEK 392
LLS A SG+ EK
Sbjct: 513 ILLSNMYAASGMWEK 527
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 187/485 (38%), Positives = 282/485 (58%), Gaps = 45/485 (9%)
Query: 36 DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSD 95
D+C +M +LK+IH Q+I S + N S RLL FCALS SG LSYA +F++ + +
Sbjct: 34 DKCTSMHQLKQIHAQMIVSARIHDNYAAS---RLLSFCALSESGDLSYALRLFNNTQEPN 90
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
+ +N +IRA+A + + + L LY M + P TFPFLLK C+
Sbjct: 91 SFMWNTLIRAHA------SSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQS 144
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
V+ V+KFG+ ++ V N ++ + V +AR +FDE+S
Sbjct: 145 CIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVS---------------- 188
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
+R++ W ++I+G+ Q + EALELF +M + E ++P+ T
Sbjct: 189 ---------------ERSLSIWTTMISGYAQNYCSNEALELFDQM----IVEGLEPNGAT 229
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ASVLSACA G +D G+ +H ++ G++ V++GTALV MY K G + A +F +
Sbjct: 230 LASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDTIS 289
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+++T W AMI A++G+ KEA D F ++E E + PN +TFVG+LSAC H+GL+ GR
Sbjct: 290 ERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRK 349
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F +M+ VY +EP + HY CM+D+L R G EAE LI+ M + DV + GALLG C+ H
Sbjct: 350 IFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLGSCKNH 409
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
GN+E+ E+V + ++ L+P NH YV L +MYA+AGR++DV + R +MK G K+ PG S
Sbjct: 410 GNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKS-GNLKKTPGWS 468
Query: 516 SVEVD 520
V+ D
Sbjct: 469 LVDSD 473
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 182/513 (35%), Positives = 295/513 (57%), Gaps = 45/513 (8%)
Query: 43 ELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIM 102
+LK+IH I+ N + + L F +S+S +SYA NVF+ I +++T+N +
Sbjct: 33 KLKQIHAFSIRHGVSLNNPD---MGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTI 89
Query: 103 IRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
IR A +D S L Y+QM+ + + PD T+PFLLK +K L+ G +++
Sbjct: 90 IRGYA-----ESDNPSPAFL-FYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSV 143
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
++ G VFVQNS++ ++ ACG D + A
Sbjct: 144 TIRNGFESLVFVQNSLLHIYAACG-------------------------------DTESA 172
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
+F MK+R++ +WNS+I GF GR EAL LF+EM VE PD T+ S+LSA
Sbjct: 173 YKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVE----PDGFTVVSLLSA 228
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
A LGA++ G+ VH YL + GL + + +L+D+Y KCG + A VF EM +++ ++W
Sbjct: 229 SAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSW 288
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
T++I A+NG+G+EA + F+EME +G+ P+ +TFVG+L AC+H G++++G F M+
Sbjct: 289 TSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKE 348
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
+ P + HY CM+D+LSRAGL +A I++MP++P+ +W LLG C +HG++ LGE
Sbjct: 349 ECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGE 408
Query: 463 KVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGV 522
+L++L+P + YV L ++YA R+ DV+ R M + G++K PG S VE+
Sbjct: 409 IARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKK-TPGYSLVELGNR 467
Query: 523 VHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
V+EF+M +++ +L +++++K G+
Sbjct: 468 VYEFTMGDRSHPQSQDVYALLEKITELLKLEGY 500
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 203/607 (33%), Positives = 324/607 (53%), Gaps = 78/607 (12%)
Query: 7 MVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLI 66
M+S +L +S PPN L + C RE ++H IK+ L +H S+
Sbjct: 1 MLSPTLSHSLQPFLPPN-------LHFPLQNCGTEREANQLHALSIKTASL---NHPSVS 50
Query: 67 TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYK 126
+RLL A +L YA ++F I+ L ++N++I+ ++ +ND + L+
Sbjct: 51 SRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKC-YIENQRSNDA-----IALFC 104
Query: 127 QMLCTGISPDCLTFPFLLKECTKRLDGLV-GASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
++LC + PD T P +LK C RL L G ++G V+K G D FV +S++S++ C
Sbjct: 105 KLLCDFV-PDSFTLPCVLKGCA-RLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKC 162
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL---------------------- 223
G + R +FD M ++DVVSWN++I GY R G++++AL
Sbjct: 163 GEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLS 222
Query: 224 ---------DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS---------- 264
D+F RM RN SWN++I G+++ G + A ELF +M S
Sbjct: 223 KSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITG 282
Query: 265 -----------------VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
+ E + P+ TI +SA + + ++ G+WVH Y+ +SG D
Sbjct: 283 YERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTD 342
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
V+GT L++MY KCG V+ A VF+ +PKK WT++I ++G ++ + F EM
Sbjct: 343 GVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCR 402
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
G++P+ +TF+G+L+AC+H+G E F MM + Y ++P + HY C+ID+L RAG
Sbjct: 403 TGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLE 462
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
EA+ I MP++ + +W +LL G + HGN+ +GE AQ+LIDL P YV L +MYA
Sbjct: 463 EAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYA 522
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
AG ++ V++ R +MK++G++K+ PGCSS+E G +HEF + EE+ + L +
Sbjct: 523 AAGLWEKVRQVREMMKKKGMKKD-PGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMK 581
Query: 548 KIMKNGG 554
K + G
Sbjct: 582 KKLNVAG 588
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 196/556 (35%), Positives = 302/556 (54%), Gaps = 43/556 (7%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
I + +L++IH Q+ + ++ ++T+ + C S S+ YA ++F +
Sbjct: 49 IHASNSTHKLRQIHGQLYRCNVFSSS---RVVTQFISSC--SSLNSVDYAISIFQRFELK 103
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ Y +N +IR A ++ + + ML ISPD LTFPF+LK +G
Sbjct: 104 NSYLFNALIRGLA------ENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGG 157
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE----MSNRDVVSWNAMI 210
VG +++ ++KFG+ D FV+ S++ +++ + SA +FDE + N V+ WN +I
Sbjct: 158 VGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLI 217
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV----- 265
GY R GDL A +LF M K++ SWNS+I GF++ G A ELF +M +V
Sbjct: 218 HGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTT 277
Query: 266 ----------------------EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
EE +P+ TI S LSACA +GA+D G +H YL +G
Sbjct: 278 MVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNG 337
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
++VIGTALVDMY KCG +E A VF E +K L W+ MI +A++G+ ++A F
Sbjct: 338 FKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFE 397
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
M+ G +P+ V F+ +L+AC+HSG V +G F MR YL+EP + HY ++D+L RA
Sbjct: 398 WMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRA 457
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
G EA + IR+MP+ PD VWGAL C+ H NVE+ E ++ L+ L+P + YV L
Sbjct: 458 GRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLS 517
Query: 484 DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLIL 543
+ YA GR+DD ++ R M++ G K+ PG S +EVD +H F + E+ L
Sbjct: 518 NAYASVGRWDDAERVRVSMRDHGAHKD-PGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKL 576
Query: 544 NGLSKIMKNGGFGQYI 559
+ +S + G+ + I
Sbjct: 577 DEISASAREKGYTKEI 592
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 186/485 (38%), Positives = 282/485 (58%), Gaps = 45/485 (9%)
Query: 36 DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSD 95
D+C +M +LK+IH Q+I S + N S RLL FCALS SG LSYA +F++ + +
Sbjct: 36 DKCTSMHQLKQIHAQMIVSARIHDNYAAS---RLLSFCALSESGDLSYALRLFNNTQEPN 92
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
+ +N +IRA+A + + + L LY M + P TFPFLLK C+
Sbjct: 93 SFMWNTLIRAHA------SSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQS 146
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
V+ V+KFG+ ++ V N ++ + V +AR +FDE+S
Sbjct: 147 CIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVS---------------- 190
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
+R++ W ++I+G+ Q + EALELF +M + E ++P+ T
Sbjct: 191 ---------------ERSLSIWTTMISGYAQNYCSNEALELFDQM----IVEGLEPNGAT 231
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ASVLSACA G +D G+ +H ++ G++ V++GTALV MY K G + A +F +
Sbjct: 232 LASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDXIS 291
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+++T W AMI A++G+ KEA D F ++E E + PN +TFVG+LSAC H+GL+ GR
Sbjct: 292 ERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRK 351
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F +M+ VY +EP + HY CM+D+L R G EAE LI+ M + DV + GALLG C+ H
Sbjct: 352 IFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLGSCKNH 411
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
GN+E+ E+V + ++ L+P NH YV L +MYA+AGR++DV + R +MK ++K PG S
Sbjct: 412 GNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKK-TPGWS 470
Query: 516 SVEVD 520
V+ D
Sbjct: 471 LVDSD 475
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 199/537 (37%), Positives = 305/537 (56%), Gaps = 28/537 (5%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P+K+ T L L A++ + ++K+IH Q I + + + ++ +G +
Sbjct: 64 PDKQ-TLLYLLQAVN---FISQVKQIHCQAIVTGLFSFGYLQNTLIKVYL-----ENGLV 114
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A VF + D+ ++N+MI A K + ++L+ +M+ G+ PD T
Sbjct: 115 RLAHQVFEKMPSPDIVSFNVMIVGYAKKG------FGLEAMRLFHEMVGLGLEPDEFTIL 168
Query: 142 FLLKECTKRLDGLVGASVYG--QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
LL C + + G +V+G + K + ++ + N+++ +++ C V A F +
Sbjct: 169 GLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGALK 228
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+D+VSWN ++ G + G+L+ A F +M R+I SWNS++TG+ G EL +
Sbjct: 229 EKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVD 288
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M V E V PD +T+ S++SA GA+D G+W HG++ R + D +G+AL+DMY
Sbjct: 289 M----VMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYC 344
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG +ERA VFKE+ KKD WT MI+ A +GYG +A + F EM+ E V P+ VTFV
Sbjct: 345 KCGSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQ-EDVSPDDVTFVS 403
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+LSAC+HSGLV++G F M Y +EP V HY C++D+L+R+G SEA+ +I MPM+
Sbjct: 404 VLSACSHSGLVDQGIKVFSSMTD-YGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMK 462
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
P +WGA+L CQ G+VEL E ++ L++LDP Y L ++YA +GR+ KK R
Sbjct: 463 PSRSIWGAMLNACQAQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAASGRWSYSKKIR 522
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEF--SMKGSPKVVKEELVLILNGLSKIMKNGG 554
M+ RG++K GCSSV VDGVVH F + K P V ++ ILN L MK G
Sbjct: 523 ETMESRGVKK-TAGCSSVVVDGVVHNFISADKCHPGWV--DISSILNCLKNEMKPGA 576
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 222/491 (45%), Gaps = 95/491 (19%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIK-RSDLYTYNIMIRA-NACKSSETNDTHSGKCLK 123
++R ++F A+S +L A +F+H +L+ YN +I A ++ K E+
Sbjct: 1 MSRFIYFSAVSHPDNLDLAITLFNHFTPNPNLFIYNTLISAFSSLKKIES--------FY 52
Query: 124 LYKQMLCTGISPDCLTFPFLLKECT--KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
LY +L +G PD T +LL+ ++ + ++ + FG ++QN++I +
Sbjct: 53 LYNVLLSSGECPDKQTLLYLLQAVNFISQVKQIHCQAIVTGLFSFG-----YLQNTLIKV 107
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
++ G V A +F++M + D+VS+N MI+GY +
Sbjct: 108 YLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKK------------------------- 142
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL-- 299
G EA+ LF EM +E PD+ TI +L +C LG + GK VHG++
Sbjct: 143 ------GFGLEAMRLFHEMVGLGLE----PDEFTILGLLVSCGQLGNVKFGKAVHGWMER 192
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVE---RAYGVFKE----------------------- 333
R+ + ++++G AL+DMY KC VE R +G KE
Sbjct: 193 RKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQAR 252
Query: 334 -----MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
MP +D ++W ++++ +A G + +M E V P+ VT + L+SA SG
Sbjct: 253 LFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSAATESG 312
Query: 389 LVEKGRWC--FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+++GRW +V+ + L + + +ID+ + G A R+ + + + DV VW
Sbjct: 313 ALDQGRWAHGWVIRMQIKL---DAFLGSALIDMYCKCGSIERASRVFKEIN-KKDVTVWT 368
Query: 447 ALLGGCQMHG-NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
++ G HG + E ++ D+ P + +V++ + +G D K + M +
Sbjct: 369 TMITGLAFHGYGSKALELFSEMQEDVSP-DDVTFVSVLSACSHSGLVDQGIKVFSSMTDY 427
Query: 506 GIRKEVP--GC 514
GI V GC
Sbjct: 428 GIEPGVEHYGC 438
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 287/475 (60%), Gaps = 18/475 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLC-TGISPD 136
G + VF + + D+ ++N++I C+ E + ++++M + + P+
Sbjct: 181 GRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYE-------DAVDVFRRMQQQSSLRPN 233
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
T L C +G ++ + V+ + + + N+++ ++ CG ++ AR +F+
Sbjct: 234 EATVVSTLSACIALKMLELGKEIH-RYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFN 292
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
+M + V+ W +M+ GY+ G LD A +LF R R++ W ++I G+VQ R +A+ L
Sbjct: 293 DMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVAL 352
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F+EMQ V PD+ T+ ++L+ CA LG ++ GKW+HGY+ + + D V+GTAL++
Sbjct: 353 FREMQIKRV----SPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIE 408
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG +E++ +F + +KDT +WT++I A+NG +A + F EM GV+P+ +T
Sbjct: 409 MYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDIT 468
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
F+G+LSAC+H GLVE+GR F M VY +EP + HY C+ID+L RAG EAE LI
Sbjct: 469 FIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKS 528
Query: 437 P---MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
P E V ++GALL C+ HGNVE+GE+VA+ L+ ++ + + + L ++YA A R++
Sbjct: 529 PNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWE 588
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
DV K R MK+ G++K VPGCSSVEV+G+VHEF + + E+ +L+ ++K
Sbjct: 589 DVTKVRRKMKDLGVKK-VPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAK 642
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/490 (29%), Positives = 239/490 (48%), Gaps = 92/490 (18%)
Query: 5 LQMVSYSLLNSPAKVSPPN---KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTND 61
+ S L+ P +S + K+S +L+N CK+M+ LK+I TQI+++ Q+ D
Sbjct: 10 FKFTSLHFLSKPLHLSTSSHFTKKSCIFLLKN----CKSMQHLKQIQTQILRTGFHQSGD 65
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
+ + + C G+L YA +F++I L+ YN++I+A T + K
Sbjct: 66 ---TLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKAF------TKNGSFRKA 116
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
+ L++Q+ G+SPD T+PF+ K + G VYG VVK G+ D +V NS++ +
Sbjct: 117 VLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDM 176
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ G V + R +F+EM RDVVSWN +I GY++ + A+D+FRRM++
Sbjct: 177 YAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQ---------- 226
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
QSS ++P++ T+ S LSAC L ++ GK +H Y+R
Sbjct: 227 -------------------QSS-----LRPNEATVVSTLSACIALKMLELGKEIHRYVRE 262
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA----------- 350
L + IG ALVDMY KCG + A +F +MP K + WT+M+S +
Sbjct: 263 Q-LGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEAREL 321
Query: 351 ---------------LNGYGK-----EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
+NGY + +A FREM+ + V P+ T V LL+ CA G +
Sbjct: 322 FERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTL 381
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYA----CMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
E+G+W H Y+ E + A +I++ ++ G ++ + + E D W
Sbjct: 382 EQGKWI-----HGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLK-EKDTASWT 435
Query: 447 ALLGGCQMHG 456
+++ G M+G
Sbjct: 436 SIICGLAMNG 445
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 22/301 (7%)
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G+L A +F + +F +N +I F + G R+A+ LF++++ EE + PD T
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLR----EEGLSPDNFTY 135
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
V A LG + G+ V+G++ +SGL+ D + +L+DMY + G V+ VF+EMP+
Sbjct: 136 PFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQ 195
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRW 395
+D ++W +IS + ++A D FR M+ + +RPN T V LSAC ++E G+
Sbjct: 196 RDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKE 255
Query: 396 CFVMMRHVYLVEPHVYHYA---CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
H Y+ E + ++D+ + G S A + MP++ V W +++ G
Sbjct: 256 I-----HRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKT-VICWTSMVSGY 309
Query: 453 QMHGNVELGEKVAQYLIDLDPLNH-AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
G ++ A+ L + P+ + + + Y + RFDD L +E I++
Sbjct: 310 VNCGQLD----EARELFERSPVRDVVLWTAMINGYVQFNRFDDAVA---LFREMQIKRVS 362
Query: 512 P 512
P
Sbjct: 363 P 363
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 302/546 (55%), Gaps = 19/546 (3%)
Query: 6 QMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSL 65
++ +S L++P+ S ++ + I + +++ LK++ + +I S + H L
Sbjct: 4 RVTQFSYLHAPS--SHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHS---HFL 58
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
+LL FC L + +LSYA +F + + Y ++ A S + H+ +
Sbjct: 59 CFKLLRFCTLRLC-NLSYARFIFDRFSFPNTHLYAAVLTA----YSSSLPLHASSAFSFF 113
Query: 126 KQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI-SLFM 183
+ M+ + P+ +P +LK V+ + K G V VQ +++ S
Sbjct: 114 RLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYAS 173
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
+ +T AR LFDEMS R+VVSW AM+ GY RSGD+ A+ LF M +R++ SWN+I+
Sbjct: 174 SVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAA 233
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
Q G EA+ LF+ M + E ++P+++T+ VLSACA G + K +H + R
Sbjct: 234 CTQNGLFLEAVSLFRRMIN---EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRD 290
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
L DV + +LVD+YGKCG +E A VFK KK AW +MI+ FAL+G +EA F
Sbjct: 291 LSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFE 350
Query: 364 EM---EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
EM ++P+H+TF+GLL+AC H GLV KGR F +M + + +EP + HY C+ID+L
Sbjct: 351 EMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLL 410
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
RAG F EA ++ +M M+ D +WG+LL C++HG+++L E + L+ L+P N +
Sbjct: 411 GRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVA 470
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELV 540
+ ++Y + G +++ ++ R ++K + K PG S +E+D VH+F EE+
Sbjct: 471 MMANLYGEMGNWEEARRARKMIKHQNAYKP-PGWSRIEIDNEVHQFYSLDKSHPETEEIY 529
Query: 541 LILNGL 546
+IL+ L
Sbjct: 530 MILDSL 535
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/447 (39%), Positives = 266/447 (59%), Gaps = 11/447 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L YA VF + DL ++N +I C S+ N + L L+ M ++ D +
Sbjct: 206 GELGYAQKVFDKMDDRDLVSWNSLI----CGYSQCN--RFKEVLDLFNLMREANVTADSV 259
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T ++ C+ + V S+ + V DV++ NS+I ++ G V AR +FD M
Sbjct: 260 TMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRM 319
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+++VSWNAM+ GY +GDL A LF M RN+ SW +I+G Q + +AL+LFQ
Sbjct: 320 QEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQ 379
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM ++V KPD+IT++SVLSAC++LG +D G+ VH Y+ R + DV +G AL+DMY
Sbjct: 380 EMMDANV----KPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMY 435
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG V++A VF +M KKD+++WT+MI A+NG+ F+ F +M +G++P H +F+
Sbjct: 436 CKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFI 495
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L AC H+GLV+KG F M HVY + P + HY C++D+LSR+G A I+ MP+
Sbjct: 496 GILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQMPV 555
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
PDV +W LL C++H N+ L E L++LDP N YV L + YA + R+DD +
Sbjct: 556 VPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSNTYAGSDRWDDASRM 615
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHE 525
R+LM ++K SS+EV G ++
Sbjct: 616 RDLMVVGDVQKP-SSWSSIEVIGATNK 641
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 219/479 (45%), Gaps = 93/479 (19%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHS---LITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+++ +KE H +I++ HH ++ ++ ALS S L+ A F I + L
Sbjct: 69 SIKSIKEQHAHLIRT------HHHKNPKSMSNVIKSYALSRS-HLNKANFAFIQIGQPTL 121
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+N +IR +S N+ +Y Q GI D LTF +L K C++ D L G
Sbjct: 122 LIFNYLIRG-LSQSENPNEAIVMYSDLMYNQ----GILGDNLTFIYLFKACSRVKDVLHG 176
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
+ QV+K G +F++NS+I ++ G + A+ +FD+M +RD+VSWN++I GY +
Sbjct: 177 QVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQC 236
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
LDLF M++ N V D +T+
Sbjct: 237 NRFKEVLDLFNLMREAN-----------------------------------VTADSVTM 261
Query: 277 ASVLSACAYL---GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV--- 330
V+ AC+YL G +D + Y+ +D DV +G +L+DMYG+ G V+ A V
Sbjct: 262 VKVILACSYLCEDGVVDS---MVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDR 318
Query: 331 ----------------------------FKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
F EMP ++ ++WT MIS A +A F
Sbjct: 319 MQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLF 378
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILS 421
+EM V+P+ +T +LSAC+H GL++ G+ M RH ++ VY +ID+
Sbjct: 379 QEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHD--IKSDVYVGNALIDMYC 436
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE-LGEKVAQYLID-LDPLNHAF 478
+ G+ +A + M + D W +++ G ++G V+ + E +Q L D L P + +F
Sbjct: 437 KCGVVDKALEVFHDMK-KKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSF 494
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 198/588 (33%), Positives = 309/588 (52%), Gaps = 61/588 (10%)
Query: 5 LQMVSYSLLNSPAKVS--PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH 62
L++ S+ L + A +S PPN L+ I +C + L+ +IK+ Q
Sbjct: 10 LRVPSHHLRDFSASLSLAPPN-------LKKIIKQCSTPKLLESALAAMIKTSLNQD--- 59
Query: 63 HSLITRLL--FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
RL+ F A + L A + + ++ +++ YN + + S H +
Sbjct: 60 ----CRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCS------HPIR 109
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L+LY +ML +SP T+ L+K + G S+ + KFG V +Q ++I
Sbjct: 110 SLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLID 167
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSW-------------------------------NAM 209
+ A G + AR +FDEM RD ++W N +
Sbjct: 168 FYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCL 227
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I GY+ G+L+ A LF +M ++I SW ++I G+ Q R REA+ +F +M +EE +
Sbjct: 228 INGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM----MEEGI 283
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
PD++T+++V+SACA+LG ++ GK VH Y ++G DV IG+ALVDMY KCG +ERA
Sbjct: 284 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 343
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF +PKK+ W ++I A +G+ +EA F +ME E V+PN VTFV + +AC H+GL
Sbjct: 344 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 403
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V++GR + M Y + +V HY M+ + S+AGL EA LI +M EP+ +WGALL
Sbjct: 404 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 463
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
GC++H N+ + E L+ L+P+N +Y L MYA+ R+ DV + R M+E GI K
Sbjct: 464 DGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 523
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQ 557
PG SS+ +D H F+ +E+ L+L+ + M G+ Q
Sbjct: 524 ICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 571
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 198/588 (33%), Positives = 309/588 (52%), Gaps = 61/588 (10%)
Query: 5 LQMVSYSLLNSPAKVS--PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH 62
L++ S+ L + A +S PPN L+ I +C + L+ +IK+ Q
Sbjct: 755 LRVPSHHLRDFSASLSLAPPN-------LKKIIKQCSTPKLLESALAAMIKTSLNQD--- 804
Query: 63 HSLITRLL--FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
RL+ F A + L A + + ++ +++ YN + + S H +
Sbjct: 805 ----CRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCS------HPIR 854
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L+LY +ML +SP T+ L+K + G S+ + KFG V +Q ++I
Sbjct: 855 SLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLID 912
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSW-------------------------------NAM 209
+ A G + AR +FDEM RD ++W N +
Sbjct: 913 FYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCL 972
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I GY+ G+L+ A LF +M ++I SW ++I G+ Q R REA+ +F +M +EE +
Sbjct: 973 INGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM----MEEGI 1028
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
PD++T+++V+SACA+LG ++ GK VH Y ++G DV IG+ALVDMY KCG +ERA
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF +PKK+ W ++I A +G+ +EA F +ME E V+PN VTFV + +AC H+GL
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V++GR + M Y + +V HY M+ + S+AGL EA LI +M EP+ +WGALL
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
GC++H N+ + E L+ L+P+N +Y L MYA+ R+ DV + R M+E GI K
Sbjct: 1209 DGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1268
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQ 557
PG SS+ +D H F+ +E+ L+L+ + M G+ Q
Sbjct: 1269 ICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 1316
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 278/477 (58%), Gaps = 42/477 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF + ++ T+N M + T + + +KL+ +ML I D +
Sbjct: 173 GEVEVARRVFDEMSERNVRTWNSMF------AGYTKSGNWEEVVKLFHEMLELDIRFDEV 226
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C + D +G + V + G+ + + S++ ++ CG V +AR
Sbjct: 227 TLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARR----- 281
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
LF +M +R++ +W+++I+G+ Q R REAL+LF
Sbjct: 282 --------------------------LFDQMDRRDVVAWSAMISGYSQASRCREALDLFH 315
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ ++++ P++IT+ S+LS+CA LGA++ GKWVH ++++ + V +GTAL+D Y
Sbjct: 316 EMQKANID----PNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFY 371
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG VE + VF +MP K+ L+WT +I A NG GK+A + F M + V PN VTF+
Sbjct: 372 AKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFI 431
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+LSAC+H+GLV++GR FV M + +EP + HY CM+DIL RAGL EA + I++MP+
Sbjct: 432 GVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPI 491
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+P+ +W LL C++H NVE+GE+ + LI L+P + Y+ L ++YA GR++D K
Sbjct: 492 QPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKV 551
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R MKE+GI+K PGCS +E+DGV+HEF + + EE+ + + K +K+ G+
Sbjct: 552 RGEMKEKGIKK-TPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGY 607
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/491 (29%), Positives = 245/491 (49%), Gaps = 66/491 (13%)
Query: 16 PAKVSPPNKESTKLILRNA----IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF 71
PAK +P K S L N +++CK +R+L EIH +IK+ L + LL
Sbjct: 9 PAK-TPTAKTSISLFPENPKTLILEQCKTIRDLNEIHAHLIKTRLLLKP---KVAENLLE 64
Query: 72 FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
A+ + S+ YA ++F I D YNIMIR K S + + L+K+M
Sbjct: 65 SAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQS------PHEAILLFKEMHEN 118
Query: 132 GISPDCLTFPFLLKECTKRLDGLV-GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
+ PD TFP +LK C+ RL L G ++ ++K G FV+N++I ++ CG
Sbjct: 119 SVQPDEFTFPCILKVCS-RLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCG---- 173
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
+++VA +F M +RN+ +WNS+ G+ + G
Sbjct: 174 ---------------------------EVEVARRVFDEMSERNVRTWNSMFAGYTKSGNW 206
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
E ++LF EM +E ++ D++T+ SVL+AC L ++ G+W++ Y+ GL + +
Sbjct: 207 EEVVKLFHEM----LELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTL 262
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
T+LVDMY KCG V+ A +F +M ++D +AW+AMIS ++ +EA D F EM+ +
Sbjct: 263 ITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANI 322
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWC--FVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
PN +T V +LS+CA G +E G+W F+ + + L V ++D ++ G
Sbjct: 323 DPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLT---VTLGTALMDFYAKCGSVES 379
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI-----DLDPLNHAFYVNLC 483
+ + MP++ +V W L+ G +G G+K +Y +++P N ++ +
Sbjct: 380 SIEVFGKMPVK-NVLSWTVLIQGLASNGQ---GKKALEYFYLMLEKNVEP-NDVTFIGVL 434
Query: 484 DMYAKAGRFDD 494
+ AG D+
Sbjct: 435 SACSHAGLVDE 445
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 256/425 (60%), Gaps = 5/425 (1%)
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
ML G P+ LTF FL C L G ++ +K G DV+ +++ ++ G
Sbjct: 1 MLLKGCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGV 60
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+ AR +FDEM+ RD+ +WN++I GY RSGD++ AL+LF+ M R++ SW ++I+G+ Q
Sbjct: 61 LMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQN 120
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
G +ALE+F +M+ ++ V+P+++TIASV SACA LGA++ G+ + Y R +GL +
Sbjct: 121 GMYTKALEMFLKMEK---DKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKN 177
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL-AWTAMISVFALNGYGKEAFDTFREME 366
+ + L++MY +CG ++ A VF E+ K+ L +W +M+ A++G EA + +M
Sbjct: 178 LYVSNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQML 237
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
EG+ P+ VTFVGL+ AC H GLV KG F M + + P + HY CM+D+L RAG
Sbjct: 238 GEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGEL 297
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
EA L++SMPM+PD +WG LLG C H NVE E A+ L ++P N YV LC++Y
Sbjct: 298 QEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIY 357
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
A A R+D V K R LMK I K G S +E +G +H+F ++ E+ +LN +
Sbjct: 358 ASAQRWDGVAKLRKLMKGGQITK-AAGYSVIEGEGEIHKFIVEDKSHPRHYEIYALLNEI 416
Query: 547 SKIMK 551
S MK
Sbjct: 417 STKMK 421
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 79 GSLSYATNVFSHI-KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G + A +VF+ I KR +L ++N M+ A S + L+LY QML GI PD
Sbjct: 192 GKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHG------RSNEALQLYDQMLGEGIEPDD 245
Query: 138 LTFPFLLKECT 148
+TF L+ CT
Sbjct: 246 VTFVGLILACT 256
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 193/539 (35%), Positives = 307/539 (56%), Gaps = 36/539 (6%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS-GSLSYATNVFSHIKR 93
+ C + R L + H QI+ S Q N ++ LL +L +S GSL A VF I
Sbjct: 34 LKSCVSFRNLAKTHAQIVVSGFSQKN---YILNHLL---SLYISFGSLGSAQKVFEDITA 87
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+N +I+ + T S K ++L+K+M G+ + T+ FLL C +
Sbjct: 88 PSTTVWNQIIKGH------TRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLF 141
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF-----VTSARMLFDEMSNRDVVSWNA 208
G ++G+V+ G +++V+ ++I+L+ G + A LFDEM + +VV WN+
Sbjct: 142 REGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNS 201
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
++ GY+R GD D A +F M +RN+ +W ++ GF Q G+ + AL LF +M+ + VE
Sbjct: 202 LLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVE-- 259
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG----LDCDVVIGTALVDMYGKCGCV 324
D++ + + LSACA LG + GKW+HGY+ R+ L V + AL+ MY CG +
Sbjct: 260 --LDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAM 317
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG---VRPNHVTFVGLL 381
+ AY +F+E+P+++T++W+++I+ FA G G EA F+ M G VRP+ +TF+G L
Sbjct: 318 DLAYKLFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGAL 377
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
+AC+H+GL+ G F M + V P + HY CM+D+LSRAGL +EA LI SMPM+P+
Sbjct: 378 TACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPN 437
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYL-IDLDPLNHA--FYVNLCDMYAKAGRFDDVKKT 498
VWGALL GC++H N E+ VA++L ++DP N A +++ L ++YA GR+ D
Sbjct: 438 NAVWGALLSGCRLHKNDEIVSHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATV 497
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQ 557
R M + G++K G S +E++GV+ F M G +++ LI L I + G+
Sbjct: 498 RRNMHDIGVKKP-SGRSWIEINGVLCSF-MVGEE--THKDVNLIYEMLGNITRQTQMGE 552
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 293/557 (52%), Gaps = 47/557 (8%)
Query: 31 LRNAIDECKNMREL---KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNV 87
L + + C M+ L KE+H I++ + + + C G + A +
Sbjct: 273 LASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRC-----GDMKSAFKI 327
Query: 88 FSHIKRSDLYTYNIMI-----RANACKSSE----------TNDTHSGKC----------- 121
FS R +YN MI N K+ E D S C
Sbjct: 328 FSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMF 387
Query: 122 ---LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSV 178
L L++ +L GI PD T +L G ++ + G+ + FV ++
Sbjct: 388 DDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGAL 447
Query: 179 ISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK----KRNI 234
+ ++ C + +A+M FDE+S RD +WNA+I GY R + +L RMK + N+
Sbjct: 448 VEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNV 507
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
++WNSI+ G V+ + A++LF EMQ SS+ +PD T+ +L+AC+ L I GK
Sbjct: 508 YTWNSILAGLVENKQYDLAMQLFNEMQVSSL----RPDIYTVGIILAACSKLATIHRGKQ 563
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
VH Y R+G D D IG LVDMY KCG ++ Y V+ ++ + + AM++ +A++G+
Sbjct: 564 VHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGH 623
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
G+E FR M VRP+HVTF+ +LS+C H+G ++ G CF +M Y + P + HY
Sbjct: 624 GEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLME-TYNITPTLKHYT 682
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
CM+D+LSRAG EA +LI++MPME D W ALLGGC +H V LGE A+ LI+L+P
Sbjct: 683 CMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPS 742
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKV 534
N YV L ++YA AGR+ D+ KTR LM ++G++K PGCS +E VH F
Sbjct: 743 NTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKS-PGCSWIEDRDGVHIFLASDKSHQ 801
Query: 535 VKEELVLILNGLSKIMK 551
EE+ +L+ L+K ++
Sbjct: 802 RVEEIYFMLDNLTKFIR 818
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 225/469 (47%), Gaps = 53/469 (11%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+C ++ E K++ + + C+ N S+IT A +G + A ++ ++ S+L
Sbjct: 181 KCGSLDEAKKVLEGMTQKDCVSWN---SIIT------ACVANGVVYEALDLLENMLLSEL 231
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
++ +A +++ + + ++L+ +M+ G++PD T +L C++ VG
Sbjct: 232 EPN--VVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVG 289
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++G +V+ + + FV N+++ ++ CG + SA +F + + + S+N MI+GYL +
Sbjct: 290 KELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLEN 349
Query: 217 GDLDVALDLFRRMKK----RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
G++ A +LF +M++ R+ SWN +I+G V +AL LF+++ + E ++PD
Sbjct: 350 GNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDL----LMEGIEPD 405
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
T+ S+L+ A + I GK +H GL + +G ALV+MY KC + A F
Sbjct: 406 SFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFD 465
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
E+ ++DT W A+IS +A + + M+++G PN T+ +L +GLVE
Sbjct: 466 EISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSIL-----AGLVEN 520
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
++ M LF+E ++ + PD++ G +L C
Sbjct: 521 KQYDLAMQ------------------------LFNE----MQVSSLRPDIYTVGIILAAC 552
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFY-VNLCDMYAKAGRFDDVKKTRN 500
+ G++V Y I + A L DMYAK G + N
Sbjct: 553 SKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYN 601
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 216/452 (47%), Gaps = 68/452 (15%)
Query: 9 SYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITR 68
++SLL++P P + IL+++ ++ K++H+ IK+ +H+ + T+
Sbjct: 23 NFSLLHTP----PLTSTTYSTILQSS----NSLTLGKQLHSHSIKTGFY---NHNFVQTK 71
Query: 69 LLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM 128
LL S++ S A ++F + +L+++ ++R + N K L+++
Sbjct: 72 LLQM--YSINSSFEDAWHMFDKMTLKNLHSWTAVLRLH------LNMGLFYKGFMLFEEF 123
Query: 129 LCTGISP--DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
LC G+ D FP +L C D +G V+G V+K G +V+V N++I ++ CG
Sbjct: 124 LCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCG 183
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM----KKRNIFSWNSIIT 242
+ A+ + + M+ +D VSWN++I + +G + ALDL M + N+ +W+++I
Sbjct: 184 SLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIG 243
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
GF E++ELF M + V PD T+ASVL AC+ + + GK +HGY+ R
Sbjct: 244 GFSSNAYDVESVELFARMVGAG----VAPDARTLASVLPACSRMKWLFVGKELHGYIVRH 299
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
L + + ALV MY +CG ++ A+ +F + +K ++ MI + NG +A + F
Sbjct: 300 ELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELF 359
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
+ME EGV + ++ + CMI
Sbjct: 360 YQMEQEGVERDRIS------------------------------------WNCMISGHVD 383
Query: 423 AGLFSEAERLIRSMPM---EPDVFVWGALLGG 451
+F +A L R + M EPD F G++L G
Sbjct: 384 NFMFDDALMLFRDLLMEGIEPDSFTLGSILTG 415
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
GK +H + ++G + T L+ MY E A+ +F +M K+ +WTA++ +
Sbjct: 50 GKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLN 109
Query: 352 NGYGKEAFDTFREMEAEGV--RPNHVTFVGLLSACAHSGLVEKGRWCFVM-MRHVYLVEP 408
G + F F E +G+ + + F +L+ C G +E GR M ++H ++
Sbjct: 110 MGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVT-- 167
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+VY +ID+ + G EA++++ M + D W +++ C +G V
Sbjct: 168 NVYVGNALIDMYGKCGSLDEAKKVLEGMT-QKDCVSWNSIITACVANGVV 216
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 198/588 (33%), Positives = 309/588 (52%), Gaps = 61/588 (10%)
Query: 5 LQMVSYSLLNSPAKVS--PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH 62
L++ S+ L + A +S PPN L+ I +C + L+ +IK+ Q
Sbjct: 10 LRVPSHHLRDFSASLSLAPPN-------LKKIIKQCSTPKLLESALAAMIKTSLNQD--- 59
Query: 63 HSLITRLL--FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
RL+ F A + L A + + ++ +++ YN + + S H +
Sbjct: 60 ----CRLMNQFITACTSFKCLDLAVSTMTQMQEPNVFVYNALFKGFVTCS------HPIR 109
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L+LY +ML +SP T+ L+K + G S+ + KFG V +Q ++I
Sbjct: 110 SLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLID 167
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSW-------------------------------NAM 209
+ A G + AR +FDEM RD ++W N +
Sbjct: 168 FYSATGGIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCL 227
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I GY+ G+L+ A LF +M ++I SW ++I G+ Q R REA+ +F +M +EE +
Sbjct: 228 INGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM----MEEGI 283
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
PD++T+++V+SACA+LG ++ GK VH Y ++G DV IG+ALVDMY KCG +ERA
Sbjct: 284 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 343
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF +PKK+ W ++I A +G+ +EA F +ME E V+PN VTFV + +AC H+GL
Sbjct: 344 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 403
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V++GR + M Y + +V HY M+ + S+AGL EA LI +M EP+ +WGALL
Sbjct: 404 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 463
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
GC++H N+ + E L+ L+P+N +Y L MYA+ R+ DV + R M+E GI K
Sbjct: 464 DGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 523
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQ 557
PG SS+ +D H F+ +E+ L+L+ + M G+ Q
Sbjct: 524 ICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQ 571
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 204/589 (34%), Positives = 306/589 (51%), Gaps = 91/589 (15%)
Query: 10 YSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
Y L P PN+++ + + +C ++++LK+IH Q++ + + N
Sbjct: 14 YLNLQKPHSKPNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNS-------- 65
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
F ++ +YA+ FS+I Y++N+MIR + T S L+ Y +M
Sbjct: 66 -FLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLS-----TAWNKSSLALEFYSRMK 119
Query: 130 CTGISPDCLTFPFLLKECTKRL-------------------DGLVGASV---YGQVVKFG 167
G+ P+ LT+PFL C+ L DG V S+ Y + K G
Sbjct: 120 FLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMG 179
Query: 168 VCDDVFVQ---------NSVIS-------------LF---MACGFVTSARMLFD------ 196
VF + NS+IS LF M GF + L
Sbjct: 180 DARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACG 239
Query: 197 EMSNRDVVSW-------NAMIIGYL----------RSGDLDVALDLFRRMKKRNIFSWNS 239
E+ + + +W N M + Y + GDL A +F MKK++ +WN+
Sbjct: 240 ELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 299
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+ITG+ Q G + EA++LFQ+M+ SS PD+IT+ +LSACA +GA+D GK V Y
Sbjct: 300 MITGYAQNGMSEEAIKLFQDMRMSST----APDQITLIGILSACASIGALDLGKQVEIYA 355
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
G DV +GTALVDMY KCG ++ A+ VF MPKK+ ++W AMIS A +G +EA
Sbjct: 356 SERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEAL 415
Query: 360 DTFREMEAEG--VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
F+ M EG V PN +TFVG+LSAC H+GLV++GR F MM + + P + HY+CM+
Sbjct: 416 ALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMV 475
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+ SRAG EA + +MP +PD + GALLG CQ N+++ E+V + L++L+P N
Sbjct: 476 DLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSG 535
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV +YA R+DD + R LMK++G+ K PGCS ++++ +HEF
Sbjct: 536 NYVISSKLYANLRRWDDSARMRMLMKQKGVSK-TPGCSWIDINSQLHEF 583
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 175/440 (39%), Positives = 256/440 (58%), Gaps = 37/440 (8%)
Query: 118 SGKC---LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV 174
SG C L Y ML + P +F +L+ C + +G + + Q++K G D+ +
Sbjct: 8 SGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMIL 67
Query: 175 QNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
Q ++ + G+V AR LFD M+ R+ N
Sbjct: 68 QTGLLDFYAKHGYVEEARNLFDNMTERN-----------------------------SNS 98
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
+WN++I+ +VQ G A+ +FQ+MQS E VKP ++T+ S+LSACA+LGA+D G+W
Sbjct: 99 VTWNTMISAYVQCGEFGTAISMFQQMQS----ENVKPTEVTMVSLLSACAHLGALDMGEW 154
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
+HGY+R L DVV+G AL+DMY KCG +E A VF + +K+ W ++I +NG
Sbjct: 155 IHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGR 214
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
G+EA F ME EG++P+ VTFVG+LS C+HSGL+ G+ F M VY +EP V HY
Sbjct: 215 GEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYG 274
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
CM+D+L RAG EA LIR+MPM+P+ V G+LL CQ+H + +LGE+V Q L++LDP
Sbjct: 275 CMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPC 334
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKV 534
+ YV L ++YA R+DDV R LM +RG+ K PGCSS+EV+ +VHEF +
Sbjct: 335 DGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHK-TPGCSSIEVNNIVHEFVAGDTSHP 393
Query: 535 VKEELVLILNGLSKIMKNGG 554
++ L+ ++K +K G
Sbjct: 394 QFTQINAFLDEIAKELKGQG 413
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 188/543 (34%), Positives = 301/543 (55%), Gaps = 46/543 (8%)
Query: 14 NSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFC 73
SP++ S + L + + +C +++ELK+I IK+ + ++T+L+ C
Sbjct: 12 QSPSQHSSYYNTTYPSSLLSCLPKCTSLKELKQIQAFSIKT---HLQNDLQILTKLINSC 68
Query: 74 ALS-VSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG 132
+ + S+ YA +F I + D+ +N M R + ++ K + L+ + L
Sbjct: 69 TQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPL------KAISLFIKALNYN 122
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+ PD TFP LLK C G ++ +K G+ ++ +V ++I+++ C V A+
Sbjct: 123 LLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQ 182
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+FDE+ VVS+ N+IITG+ + R E
Sbjct: 183 RVFDEILEPCVVSY-------------------------------NAIITGYARSSRPNE 211
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
AL LF+++Q+ + KP+ +T+ SVLS+CA LGA+D GKW+H Y++++GLD V + T
Sbjct: 212 ALSLFRQLQARKL----KPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNT 267
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
AL+DMY KCG ++ A VF+ M +DT AW+AMI +A++G G++ F EM V+P
Sbjct: 268 ALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQP 327
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
+ +TF+GLL AC+H+GLV++G F M VY + P + HY CM+D+L RAGL EA +
Sbjct: 328 DEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKF 387
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
I +P++P +W LL C HGN+EL ++V +++LD + YV L ++ A+AG++
Sbjct: 388 IDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKW 447
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
+DV R LM +G K +PGCSS+EVD VVHEF V L L+ L K +K+
Sbjct: 448 EDVDTLRKLMIHKGAVK-IPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKS 506
Query: 553 GGF 555
G+
Sbjct: 507 VGY 509
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 197/556 (35%), Positives = 309/556 (55%), Gaps = 36/556 (6%)
Query: 16 PAKVSPPNKESTKLILRNAIDECKNMR-ELKEIHTQIIKSPCLQTNDHHSLITRLLFFCA 74
P ++ P +T L+L + + + L+EIH ++ S L + HH+ F +
Sbjct: 4 PRRLVPLRDSATLLLLPSLVAASSQSQFRLREIHAHLLVSGRLASPSHHAD-----FVAS 58
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKL-YKQMLCTGI 133
L+ S LSYA + + + L +N ++RA A G C L + +
Sbjct: 59 LASSSHLSYARLLLPQ-RPATLLAHNGLLRALA----------RGPCPGLAFAAFRELPL 107
Query: 134 SPDCLTFPFLLKEC-------------TKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
+PD +F FL++ T L+ SV+ + G D VQ+ +S
Sbjct: 108 APDHYSFTFLVRAATSLAAAASATPVPTDVAVNLLAGSVHAAAFQHGHATDPHVQSGAVS 167
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
++ A G V + R F E+ + DVV AM+ GD+D A +LF M +R+ +WN++
Sbjct: 168 MYAAVGDVGAVRAAFAEIVSPDVVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAM 227
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
+TG+V+ GR+REAL LF EMQ + V ++T+ SVL+ACA +GA++ G WVH Y+
Sbjct: 228 LTGYVRVGRSREALGLFDEMQKAGV----AVSEVTLVSVLTACAQMGALERGMWVHSYVC 283
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
G+ V +GTALVDMY KCG V + VF+ M +++ WT+ +S A+NG G+E +
Sbjct: 284 SRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLE 343
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F+ ME+ G+ PN VTFV +L C+ +GLVE+GR CF M+ + VEP + HY CM+D+
Sbjct: 344 LFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLY 403
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
RAG +A I SMP+EP VWGALL ++H NV+LG+ L +++ N A +V
Sbjct: 404 GRAGRLDDAVDFINSMPVEPHEGVWGALLNASRIHNNVDLGKHAMHKLTEIESKNDAAHV 463
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELV 540
L ++YA++ + V K RN+MK +G++K +PGCS++EVDG VHEF + +++
Sbjct: 464 LLSNIYAESHNWKGVSKVRNMMKSKGVKK-MPGCSAIEVDGKVHEFFVGSKSHPRYKDIQ 522
Query: 541 LILNGLSKIMKNGGFG 556
+L +S ++ G+
Sbjct: 523 TMLAEMSHRLRLQGYA 538
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/433 (39%), Positives = 266/433 (61%), Gaps = 4/433 (0%)
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
D Y + + NA S+ + + L ++ M+ +G+ PD ++ + C++ + L
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G S +G V++ G + N++I ++M C +A +FD MSN+ VV+WN+++ GY+
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+G++D A + F M ++NI SWN+II+G VQG EA+E+F MQS +E V D +
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS---QEGVNADGV 471
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ S+ SAC +LGA+D KW++ Y+ ++G+ DV +GT LVDM+ +CG E A +F +
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
+D AWTA I A+ G + A + F +M +G++P+ V FVG L+AC+H GLV++G+
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M ++ V P HY CM+D+L RAGL EA +LI MPMEP+ +W +LL C++
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
GNVE+ A+ + L P YV L ++YA AGR++D+ K R MKE+G+RK PG
Sbjct: 652 QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP-PGT 710
Query: 515 SSVEVDGVVHEFS 527
SS+++ G HEF+
Sbjct: 711 SSIQIRGKTHEFT 723
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 210/453 (46%), Gaps = 59/453 (13%)
Query: 15 SPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCA 74
+ K S N+ +++ CK + ELK H + K ND ++ + C
Sbjct: 19 TTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGL--DNDVSTITKLVARSCE 76
Query: 75 LSVSGSLSYATNVFSHIKR-SDLYTYNIMIRANACKSSETNDTHSGKC---LKLYKQMLC 130
L SLS+A VF + + + YN +IR A SG C + L+ +M+
Sbjct: 77 LGTRESLSFAKEVFENSESYGTCFMYNSLIRGYA---------SSGLCNEAILLFLRMMN 127
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
+GISPD TFPF L C K G ++G +VK G D+FVQNS++ + CG + S
Sbjct: 128 SGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDS 187
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
AR +FDEMS R+VVSW +MI GY R A+DLF RM +
Sbjct: 188 ARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR------------------- 228
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
+E V P+ +T+ V+SACA L ++ G+ V+ ++R SG++ + ++
Sbjct: 229 ---------------DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
+ALVDMY KC ++ A +F E + AM S + G +EA F M GV
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY----ACMIDILSRAGLF 426
RP+ ++ + +S+C+ + G+ C H Y++ + +ID+ +
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSC-----HGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
A R+ M V W +++ G +G V+
Sbjct: 389 DTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVD 420
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/617 (33%), Positives = 315/617 (51%), Gaps = 77/617 (12%)
Query: 2 SKKLQMVSYSLLNSPAKVSPPNKESTKLI----LRNAIDECKNMRELKEIHTQIIKSPCL 57
S L+ S+ L +P SP +L LR + CK +++ +I QII +
Sbjct: 73 SHPLKQSSHGL--NPCGRSPTGGGHLRLTALRCLRENMRSCKTSKQVHQIQAQIIAN-GF 129
Query: 58 QTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTH 117
Q N++ + +L+ CA ++YA +F I ++ +N M R A S
Sbjct: 130 QYNEY--ITPKLVTICA--TLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYR---- 181
Query: 118 SGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS 177
+ + L+ QM I P+C TFP +LK C K + G V+ ++K G + FV +
Sbjct: 182 --EVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTT 239
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
+I ++ A G V A +F EM R+VV+W +MI GY+ S DL A LF +R++ W
Sbjct: 240 LIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLW 299
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSV-----------------------EEMVKPDKI 274
N +++G+++GG EA +LF EM + V EEM + +
Sbjct: 300 NIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIF 359
Query: 275 TIASVLSACAY------------------------------------LGAIDHGKWVHGY 298
+ +++ A+ LGA+D GKWVH Y
Sbjct: 360 SWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVY 419
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
SGL +V +G AL+DMY KCG +E A VF+ M KD ++W +I A++ G +A
Sbjct: 420 AESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADA 479
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
+ F +M+ G +P+ +TF+G+L AC H GLVE G F M YL+ P + HY CM+D
Sbjct: 480 LNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVD 539
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+L+RAG +A +R MP+E D +W LLG C+++ NVEL E Q LI+L+P N A
Sbjct: 540 MLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPAN 599
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
YV L ++Y AGR++DV + + M++ G +K +PGCS +EV+ V EF EE
Sbjct: 600 YVMLSNIYGDAGRWEDVARLKVAMRDTGFKK-LPGCSLIEVNDAVVEFYSLDERHPQIEE 658
Query: 539 LVLILNGLSKIMKNGGF 555
+ +L GL K++++ G+
Sbjct: 659 IYGVLRGLVKVLRSFGY 675
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 295/522 (56%), Gaps = 20/522 (3%)
Query: 38 CKNMR---ELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
C N R + ++IH +I++ N ++I S G L+YA +F+ +
Sbjct: 489 CANQRNDNQGRQIHAHLIRA-----NITKNIIVETELVHMYSECGRLNYAKEIFNRMAER 543
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ Y++N MI ++ ET + L+L+KQM GI PDC + +L C D
Sbjct: 544 NAYSWNSMIEGYQ-QNGETQEA-----LRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQ 597
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G ++ +V+ + ++ +Q ++ ++ CG + A ++D+ +DV+ N M+ ++
Sbjct: 598 KGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFV 657
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
SG + A +LF +M++RN WNSI+ G+ G +E+ F EM S +E D +
Sbjct: 658 NSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEY----DVL 713
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSG-LDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
T+ ++++ C+ L A++HG +H + + G ++C VV+ TALVDMY KCG + +A VF
Sbjct: 714 TMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDN 773
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M K+ ++W AMIS ++ +G KEA + EM +G+ PN VTF+ +LSAC+H+GLVE+G
Sbjct: 774 MNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEG 833
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
F M+ Y +E HY CM+D+L RAG +A+ + MP+EP+V WGALLG C+
Sbjct: 834 LRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACR 893
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
+H ++++G AQ L +LDP N YV + ++YA AGR+ +V+ R +MK +G++K+ PG
Sbjct: 894 VHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKD-PG 952
Query: 514 CSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
S +E++ + F EE+ L L+ K G+
Sbjct: 953 VSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGY 994
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 150/610 (24%), Positives = 260/610 (42%), Gaps = 124/610 (20%)
Query: 13 LNSPAKVSP------PNKESTKLILRNAIDEC---KNMRELKEIHTQIIKSPCLQTNDHH 63
N P P P + L + I +C + + K IHTQ+I + N
Sbjct: 50 FNGPDSPKPTSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNG---YNPDA 106
Query: 64 SLITRLLFFCALS-VSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
L+T++L A S L YA +F + +L +N MI A A +D + L
Sbjct: 107 YLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYA----RVDDYM--EVL 160
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
+LY +M +G D TFP ++K C D + VVK G+ ++FV +++ +
Sbjct: 161 RLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGY 220
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI-------- 234
G++ A DE+ VV+WNA+I GY++ + A +F RM K +
Sbjct: 221 ARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFA 280
Query: 235 -------------------------------FSWNSIITGFVQGGRAREALELFQEMQSS 263
F N++I + + L++F EM
Sbjct: 281 SALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER 340
Query: 264 S---------------------------VEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
+ E K ++ + S+L A A L I G+ +H
Sbjct: 341 NQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELH 400
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
G+L R+ L+ D+++G+ALVDMY KCG VE A+ VF+ + +++ +++ A+++ + G +
Sbjct: 401 GHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAE 460
Query: 357 EAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMR------------- 401
EA + + +M++E G++P+ TF LL+ CA+ +GR ++R
Sbjct: 461 EALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETEL 520
Query: 402 -HVY---------------LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM---EPDV 442
H+Y + E + Y + MI+ + G EA RL + M + +PD
Sbjct: 521 VHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDC 580
Query: 443 FVWGALLGGCQMHGNVELGEKVAQYLI-DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
F ++L C + + G ++ +++ + V L DMYAK G D K
Sbjct: 581 FSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWK---- 636
Query: 502 MKERGIRKEV 511
+ ++ I+K+V
Sbjct: 637 VYDQTIKKDV 646
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 182/410 (44%), Gaps = 74/410 (18%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT-GISPDC 137
G + A VF + + +YN ++ + + + + L+LY M GI PD
Sbjct: 426 GMVEEAHQVFRSLLERNEVSYNALL------AGYVQEGKAEEALELYHDMQSEDGIQPDQ 479
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
TF LL C + + G ++ +++ + ++ V+ ++ ++ CG + A+ +F+
Sbjct: 480 FTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNR 539
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M+ R+ SWN+MI GY ++G+ AL LF++M+ I
Sbjct: 540 MAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGI----------------------- 576
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
KPD +++S+LS+C L G+ +H ++ R+ ++ + ++ LVDM
Sbjct: 577 ------------KPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDM 624
Query: 318 YGKCGCVERAYGV-------------------------------FKEMPKKDTLAWTAMI 346
Y KCG ++ A+ V F +M +++T W +++
Sbjct: 625 YAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSIL 684
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
+ +A G KE+F+ F EM + + +T V +++ C+ +E G ++ V
Sbjct: 685 AGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFV 744
Query: 407 EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
V ++D+ S+ G ++A + +M + ++ W A++ G HG
Sbjct: 745 NCSVVLETALVDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKHG 793
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/495 (35%), Positives = 290/495 (58%), Gaps = 20/495 (4%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
++ C N++ L + H ++ C + DH +L+ L + S+ SL YA ++F+ +
Sbjct: 18 LNHCSNLKHLHQTHAFML---C-RALDHDNLLLSLFIQSSSSLGFSL-YAYSLFTSLTHP 72
Query: 95 -DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+++ YN +IRA + + + L+ ++ + PD +FPF LK +
Sbjct: 73 PNIFLYNTIIRALSLSPQPS------LSIFLFNRIQSARLRPDSYSFPFALKAVIRLSAT 126
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD--EMSNRDVVSWNAMII 211
G + Q ++FG+ + V S+I ++ + ++ AR LFD ++ R+V WNAM+
Sbjct: 127 KTGLQFHSQAIRFGLHSHLHVLVSLIRMY-SSSHISDARKLFDGIPLTARNVALWNAMLT 185
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
Y + D+ A LF M +RN+ SW ++I+G+ R +A+ +F+ MQ +V P
Sbjct: 186 SYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNV----VP 241
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
D+IT+ +VLSACA LGA++ G+W+ Y+ GL +V + AL+DMY K G ++RA +F
Sbjct: 242 DEITLLAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIF 301
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+ M K + WT MI+ AL+G G +A + F ME + V+PN +TF+ +LSAC+H GLV+
Sbjct: 302 ESMKHKTIVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQ 361
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
R F MR Y ++P + HY CMID+L RAG EA++L++ MP EP+ +WG+LL
Sbjct: 362 LARSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAA 421
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
HG+ LGE+ ++LI+L+P N Y L ++YA GR+ + R +M++RG++K +
Sbjct: 422 SYTHGDAMLGERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKK-I 480
Query: 512 PGCSSVEVDGVVHEF 526
PG S +EV+ V+EF
Sbjct: 481 PGGSFIEVNNRVNEF 495
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/437 (41%), Positives = 270/437 (61%), Gaps = 23/437 (5%)
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
MIR + S++ H K ++LY +M+ P+ T+ FL+ C + G V+G
Sbjct: 1 MIRGH----SQSETPH--KLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHG 54
Query: 162 QVVKFGVCDDVFVQNSVISLF-MACGF--VTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
+VV G C +VFV+ S+++L+ +A G+ V AR +FDE+ +R++VSWN+++ GY+R GD
Sbjct: 55 RVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGD 114
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+D A +F M +RN+ SW ++I G Q GR ++AL LF EM+ + V K D++ + +
Sbjct: 115 VDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGV----KLDQVALVA 170
Query: 279 VLSACAYLGAIDHGKWVHGY----LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
LSACA LG + G W+H Y L V + +L+ MY CG +++AY VF M
Sbjct: 171 ALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGM 230
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV---RPNHVTFVGLLSACAHSGLVE 391
++ T++WT+MI+ FA G+ +EA F+ M+ G RP+ +TF+G+L AC+H+G V+
Sbjct: 231 QQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVD 290
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+GR F M + + P + HY CM+D+LSRAG EA RLI SMPM+P+ VWGALLGG
Sbjct: 291 QGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGG 350
Query: 452 CQMHGNVELGEKVAQYL-IDLDPLNHAFY-VNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C++H N EL VAQ L ++L P A Y V L ++YA A R+ DV R M E G+RK
Sbjct: 351 CRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRK 410
Query: 510 EVPGCSSVEVDGVVHEF 526
G S V+++GVVH+F
Sbjct: 411 PA-GRSWVQINGVVHDF 426
>gi|224118458|ref|XP_002331487.1| predicted protein [Populus trichocarpa]
gi|222873565|gb|EEF10696.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 202/549 (36%), Positives = 298/549 (54%), Gaps = 59/549 (10%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
SP N T IL A++ C +M +LK+I + K+ + H ++R+L FCALS SG
Sbjct: 43 SPTNTIITHPILL-AMESCTSMLQLKQIQAHMTKTALI---SHTFPVSRVLAFCALSDSG 98
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRA-NACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
+++A +FS ++ + Y +N MIR + K +T + QM+ G+ DC
Sbjct: 99 DINHAHLLFSQLQNPNTYIWNTMIRGYSKAKMGQTG-------FLFFCQMVQKGVEMDCR 151
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+F F LK C + L L G SV+ V K G + VQN ++ + G + AR++FDE+
Sbjct: 152 SFVFALKACEQFLGVLEGKSVHCVVWKMGFVYTLLVQNGLVHFYGLRGCLGLARLVFDEI 211
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRM----------------------------- 229
S RDVVSW +MI GY + D AL LF M
Sbjct: 212 SERDVVSWTSMIDGYSKHKWCDEALKLFDSMLMYGVVEPNEVTMIAVLSSCSQKGDLILG 271
Query: 230 -------KKRNIFS----WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
K RN+ N+I+ +V+ G A E+F M ++ P + T+A
Sbjct: 272 KTFLEYVKTRNVTRSLNLMNAILDMYVKCGCLDSAREIFDTMGAA-----FAPMENTLAC 326
Query: 279 VLSACAYLGAIDHGKWVH-GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
VL C LG +D G+W+H Y+R + V++ AL+DMY KCG + A VF +MP++
Sbjct: 327 VLPVCGQLGCLDVGQWIHRNYVRMRYNEISVILANALIDMYAKCGVIHEAAKVFNDMPER 386
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+ ++W +MI+ +A +G+ K+A F M + G +P+ +T VG+LSAC+H GLV +G+ F
Sbjct: 387 NLVSWNSMITAYASHGHAKQALSVFERMISGGFKPDDITLVGVLSACSHGGLVAEGQEYF 446
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
M+ Y +EP HYACMID+L R GL +A LI MPMEP WGAL+ C+MHGN
Sbjct: 447 QNMKRKYGIEPKNEHYACMIDLLGRVGLLEDAYELITKMPMEPSAAAWGALVHACRMHGN 506
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
VE+ + A L++LDP + YV L ++ A R+ DVK R +M+ER ++K +PG S V
Sbjct: 507 VEVAKIAAPRLLELDPEDSGIYVLLANICASGRRWGDVKMARRMMRERRVKK-IPGRSIV 565
Query: 518 EVDGVVHEF 526
EV+G HEF
Sbjct: 566 EVEGQFHEF 574
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/433 (39%), Positives = 266/433 (61%), Gaps = 4/433 (0%)
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
D Y + + NA S+ + + L ++ M+ +G+ PD ++ + C++ + L
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G S +G V++ G + N++I ++M C +A +FD MSN+ VV+WN+++ GY+
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+G++D A + F M ++NI SWN+II+G VQG EA+E+F MQS +E V D +
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS---QEGVNADGV 471
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ S+ SAC +LGA+D KW++ Y+ ++G+ DV +GT LVDM+ +CG E A +F +
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
+D AWTA I A+ G + A + F +M +G++P+ V FVG L+AC+H GLV++G+
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M ++ V P HY CM+D+L RAGL EA +LI MPMEP+ +W +LL C++
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
GNVE+ A+ + L P YV L ++YA AGR++D+ K R MKE+G+RK PG
Sbjct: 652 QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP-PGT 710
Query: 515 SSVEVDGVVHEFS 527
SS+++ G HEF+
Sbjct: 711 SSIQIRGKTHEFT 723
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 211/453 (46%), Gaps = 59/453 (13%)
Query: 15 SPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCA 74
+ K S N+ +++ CK + ELK H + K ND ++ + C
Sbjct: 19 TTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGL--DNDVSTITKLVARSCE 76
Query: 75 LSVSGSLSYATNVFSHIKR-SDLYTYNIMIRANACKSSETNDTHSGKC---LKLYKQMLC 130
L SLS+A VF + + + YN +IR A SG C + L+ +M+
Sbjct: 77 LGTRESLSFAKEVFENSESYGTCFMYNSLIRGYA---------SSGLCNEAILLFLRMMN 127
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
+GISPD TFPF L C K G ++G +VK G D+FVQNS++ + CG + S
Sbjct: 128 SGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDS 187
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
AR +FDEMS R+VVSW +MI GY R A+DLF RM +
Sbjct: 188 ARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR------------------- 228
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
+E V P+ +T+ V+SACA L ++ G+ V+ ++R SG++ + ++
Sbjct: 229 ---------------DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
+ALVDMY KC ++ A +F E + AM S + G +EA F M GV
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY----ACMIDILSRAGLF 426
RP+ ++ + +S+C+ + G+ C H Y++ + +ID+ +
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSC-----HGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
A R+ M + V W +++ G +G V+
Sbjct: 389 DTAFRIFDRMSNKT-VVTWNSIVAGYVENGEVD 420
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/593 (31%), Positives = 323/593 (54%), Gaps = 82/593 (13%)
Query: 24 KESTKLILRNAI----DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
+ + KL L+N + + K ++ +IH Q+I + + + L +S +
Sbjct: 3 QSTPKLQLKNPLLSLLQKSKTSSQILQIHAQLITTNLIS----DTFAASRLLDSVVSKTL 58
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
+++YA VF+ I + + + N M++ T + + L+ Y +M G+ D T
Sbjct: 59 NVNYAELVFAQIHQPNSFICNTMVKCY------TESSTPERALRFYAEMRRKGLLGDNYT 112
Query: 140 FPFLLKEC----------------TKR--------LDGLV------GASVYGQVVKFGVC 169
+PF+LK C KR ++GL+ G + + + V G
Sbjct: 113 YPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFS 172
Query: 170 D-DVFVQNSVISLFMACGF--------------------------------VTSARMLFD 196
+ D+ NS++ ++ CG V AR+ FD
Sbjct: 173 EKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFD 232
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
M RD+VSWN+MI GY + G+++VA ++F +M ++N+ SW+ +I G+ Q ++EAL L
Sbjct: 233 SMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNL 292
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F++M + KPD++++ +SAC+ LGA+D G+W+H Y++R+ + D+V+ TALVD
Sbjct: 293 FRQMLCQGI----KPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVD 348
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG + A +F MP+++ ++W MI +NG+GKEA + F +ME E + + +
Sbjct: 349 MYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLL 408
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
F+G+L AC+H+ LV +G F M+ VY +EP + HY C++D+L RAG + + +I+SM
Sbjct: 409 FLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSM 468
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
PM+P+ +WG+LL C++H NV L E V + L +L + YV + ++YA G ++ +
Sbjct: 469 PMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGML 528
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
+ R LMKER ++K++ G S +EVDG V EF +++EE+ L++ L+K+
Sbjct: 529 RIRKLMKERKMKKDI-GRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAKM 580
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 203/589 (34%), Positives = 305/589 (51%), Gaps = 91/589 (15%)
Query: 10 YSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
Y L P PN+++ + + +C ++++LK+IH Q++ + + N
Sbjct: 14 YLNLQKPHSKPNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNS-------- 65
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
F ++ +YA+ FS+I Y++N+MIR + T S L+ Y +M
Sbjct: 66 -FLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLS-----TAWNKSSLALEFYSRMK 119
Query: 130 CTGISPDCLTFPFLLKECTKRL-------------------DGLVGASV---YGQVVKFG 167
G+ P+ LT+PFL C+ L DG V S+ Y + K G
Sbjct: 120 FLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMG 179
Query: 168 VCDDVFVQ---------NSVIS-------------LF---MACGFVTSARMLFD------ 196
VF + NS+IS LF M GF + L
Sbjct: 180 DARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACG 239
Query: 197 EMSNRDVVSW-------NAMIIGYL----------RSGDLDVALDLFRRMKKRNIFSWNS 239
E+ + + +W N M + Y + GDL A +F MKK++ +WN+
Sbjct: 240 ELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 299
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+ITG+ Q G + EA++LFQ+M+ SS PD+IT+ +LSACA +GA+D GK V Y
Sbjct: 300 MITGYAQNGMSEEAIKLFQDMRMSST----APDQITLIGILSACASIGALDLGKQVEIYA 355
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
G DV +GTALVDMY KCG ++ A+ VF MP K+ ++W AMIS A +G +EA
Sbjct: 356 SERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEAL 415
Query: 360 DTFREMEAEG--VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
F+ M EG V PN +TFVG+LSAC H+GLV++GR F MM + + P + HY+CM+
Sbjct: 416 ALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMV 475
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+ SRAG EA + +MP +PD + GALLG CQ N+++ E+V + L++L+P N
Sbjct: 476 DLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSG 535
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV +YA R+DD + R LMK++G+ K PGCS ++++ +HEF
Sbjct: 536 NYVISSKLYANLRRWDDSARMRMLMKQKGVSK-TPGCSWIDINSQLHEF 583
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/453 (37%), Positives = 283/453 (62%), Gaps = 12/453 (2%)
Query: 78 SGSLSYATNVFSHI-KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPD 136
+GSL + +F+ + ++ ++N MI A ++ ET++ L+++M G+ D
Sbjct: 155 AGSLRDSRRLFAEMAPHRNVVSWNTMIGGCA-QAGETSEA-----CALFREMRRQGVLAD 208
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
TF LL C+K + VG V+ ++ G D+ + N+++ ++ CG + A FD
Sbjct: 209 VFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFD 268
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
M ++VVSW +M+ + G +D A D F +M +RNI SWN++I+ +VQGGR E L L
Sbjct: 269 VMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGL 328
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
+ M+S + PD++T+A VLS G + G+ +H Y++ S D V + +L+D
Sbjct: 329 YNRMKSLGL----TPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLID 384
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY +CG V+ + +F EMP K+T++W +I A++G +EA FR M ++ P+ +T
Sbjct: 385 MYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEIT 444
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FVGLLSAC+H GL+E G++ F MRH+Y V+P V HYACM+D+L R G ++A LI+ M
Sbjct: 445 FVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDM 504
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
PM+PDV VWGAL+G C++HG+VE+G+ + L++L+ +N +V + ++ + +++D+K
Sbjct: 505 PMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMK 564
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMK 529
+ R LM++RG +K++ G SS+E++ +HEF ++
Sbjct: 565 RLRKLMRDRGTKKDM-GVSSIEINNSIHEFGVE 596
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 210/466 (45%), Gaps = 92/466 (19%)
Query: 35 IDECKNMRELKEIHTQII-KSPCLQTNDHHSLITRLLF-FCALSVSG---SLSYATNVFS 89
+ +C+++R L ++H ++ P S++ +L+ +CALS +L +A +F
Sbjct: 10 LQQCRSIRHLDQLHAHLLAHGPSAVA----SVVPQLVASYCALSGRAGDVALCHARRMFD 65
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
+ D + YN +IRA +N + L L++ +L GI P+ T PF+LK C++
Sbjct: 66 RVPDPDRFAYNSLIRAY------SNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSR 119
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS-NRDVVSWNA 208
+ +G +K G VFV N+++ + G + +R LF EM+ +R+VVSWN
Sbjct: 120 ARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNT 179
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
MI G ++G+ A LFR M+++ + +
Sbjct: 180 MIGGCAQAGETSEACALFREMRRQGVLA-------------------------------- 207
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC------- 321
D T S+L C+ G ++ G+ VH ++ SG D+++G ALVDMYGKC
Sbjct: 208 ---DVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAH 264
Query: 322 ------------------------GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
G V+ A F++MP+++ ++W AMIS + G E
Sbjct: 265 RCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPE 324
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL----VEPHVYHY 413
+ M++ G+ P+ VT G+LS +G + GR M H Y+ +P V
Sbjct: 325 TLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGR-----MIHCYIQDSFSDPGVTVL 379
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ID+ +R G + L MP + W ++G MHG +
Sbjct: 380 NSLIDMYARCGQVDTSISLFTEMP-NKNTISWNVIIGALAMHGRAQ 424
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 138/303 (45%), Gaps = 20/303 (6%)
Query: 215 RSGDLDV--ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
R+GD+ + A +F R+ + F++NS+I + G +EAL L +++ + + P+
Sbjct: 51 RAGDVALCHARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDV----LRRGILPN 106
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+ T+ VL AC+ A +H HG + G V +G AL+ G + + +F
Sbjct: 107 EFTLPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFA 166
Query: 333 EM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
EM P ++ ++W MI A G EA FREM +GV + TFV LL C+ G +E
Sbjct: 167 EMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLE 226
Query: 392 KGRWCFVMM----RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GR M V L+ + ++D+ + G A R MP++ +V W +
Sbjct: 227 VGRLVHCHMLASGSRVDLILGNA-----LVDMYGKCGDLWMAHRCFDVMPIK-NVVSWTS 280
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+L HG+V+ + + N + + Y + GRF + N MK G+
Sbjct: 281 MLCALAKHGSVDAAR---DWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGL 337
Query: 508 RKE 510
+
Sbjct: 338 TPD 340
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 46/302 (15%)
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
CAL+ GS+ A + F + ++ ++N MI S + L LY +M
Sbjct: 281 MLCALAKHGSVDAARDWFEQMPERNIISWNAMI------SCYVQGGRFPETLGLYNRMKS 334
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
G++PD +T +L + D G ++ + V V NS+I ++ CG V +
Sbjct: 335 LGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQVDT 394
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
+ LF EM N++ +SWN II GRA
Sbjct: 395 SISLFTEMPNKNTISWNV-------------------------------IIGALAMHGRA 423
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR-SGLDCDVV 309
+EA+ F+ M V + PD+IT +LSAC++ G ++ G++ +R + +V
Sbjct: 424 QEAVMFFRAM----VSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVE 479
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGY---GKEAFDTFREM 365
+VD+ G+ G + +A + K+MP K D + W A+I ++G+ GK A E+
Sbjct: 480 HYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLEL 539
Query: 366 EA 367
E
Sbjct: 540 EG 541
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 103/262 (39%), Gaps = 47/262 (17%)
Query: 288 AIDHGKWVHGYLRRSGLDCDVVIGTALVDMY----GKCGCVE--RAYGVFKEMPKKDTLA 341
+I H +H +L G + LV Y G+ G V A +F +P D A
Sbjct: 15 SIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMFDRVPDPDRFA 74
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG-------- 393
+ ++I ++ +G +EA R++ G+ PN T +L AC+ + E
Sbjct: 75 YNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRARAAEHALATHGVAI 134
Query: 394 -----RWCFV----------------MMRHVYLVEPH--VYHYACMIDILSRAGLFSEAE 430
R FV R + PH V + MI ++AG SEA
Sbjct: 135 KLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEAC 194
Query: 431 RLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMY 486
L R M + DVF + +LL C GN+E+G V +++ N L DMY
Sbjct: 195 ALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMY 254
Query: 487 AKAG------RFDDVKKTRNLM 502
K G R DV +N++
Sbjct: 255 GKCGDLWMAHRCFDVMPIKNVV 276
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 282/495 (56%), Gaps = 38/495 (7%)
Query: 35 IDECKNMRELKEIHTQIIKSP-CLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR 93
+ +C N+ LK++H Q++ + QT ++ LL S + +YA +F+HI
Sbjct: 12 LQKCHNLNTLKQVHAQMLTTGLSFQT----YYLSHLL---NTSSKFASTYAFTIFNHIPN 64
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDCLTFPFLLKECTKRLD 152
L+ YN +I + S + + S LY +L + P+ TFP L K C
Sbjct: 65 PTLFLYNTLISSLTHHSDQIHLAFS-----LYNHILTHKTLQPNSFTFPSLFKACASHPW 119
Query: 153 GLVGASVYGQVVKF-GVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
G ++ V+KF D FVQNS+++ + G + +R LFD++S D+ +WN M+
Sbjct: 120 LQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLA 179
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
Y +S S S T F + EAL LF +MQ S +KP
Sbjct: 180 AYAQSA------------------SHVSYSTSFEDADMSLEALHLFCDMQLSQ----IKP 217
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
+++T+ +++SAC+ LGA+ G W HGY+ R+ L + +GTALVDMY KCGC+ A +F
Sbjct: 218 NEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLF 277
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
E+ +DT + AMI FA++G+G +A + +R M+ E + P+ T V + AC+H GLVE
Sbjct: 278 DELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVE 337
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+G F M+ V+ +EP + HY C+ID+L RAG EAE ++ MPM+P+ +W +LLG
Sbjct: 338 EGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGA 397
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
++HGN+E+GE ++LI+L+P YV L +MYA GR++DVK+ R LMK+ G+ K +
Sbjct: 398 AKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDK-L 456
Query: 512 PGCSSVEVDGVVHEF 526
PG S VE++G +HEF
Sbjct: 457 PGFSLVEINGAMHEF 471
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 297/545 (54%), Gaps = 47/545 (8%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATN 86
T+ + + + C++++ LK++H + K+ L T+ + +LL A+SV +L YA
Sbjct: 4 TQHLCSSLLTNCRSLKNLKQVHAYVCKTG-LDTDP--IIAGKLLLHSAVSVPDALDYARR 60
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP-DCLTFPFLLK 145
+F H D++ +N +IR A + N L + +M +P D +F FLLK
Sbjct: 61 LFLHFPNPDVFMHNTLIRGLAESDTPQNS------LITFVEMRRRLTAPLDSFSFAFLLK 114
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR------------- 192
G ++ Q + G+ +FV +++S++ CGFV A+
Sbjct: 115 AAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVA 174
Query: 193 ------------------MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
M+F+ M R++ SWN M+ GY ++G+L++A LF M ++
Sbjct: 175 WNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDD 234
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
SW+++I GF G EA F+E+Q + +P+++++ LSACA GAI+ GK
Sbjct: 235 VSWSTMIVGFAHNGFFYEAFGFFRELQQVGM----RPNEVSLTGALSACADAGAIEFGKI 290
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL-AWTAMISVFALNG 353
+HG++ +SG V + AL+D Y KCG V A VF+ MP+K ++ +WT+MI+ A++G
Sbjct: 291 LHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHG 350
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
YG+EA F EME G+RP+ + F+ +L AC+H+GL+EKG F M+ +Y +EP + HY
Sbjct: 351 YGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHY 410
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP 473
CM+D+ RAG +A I MP+ P +W LLG C +HGNV+L E+V + L +LDP
Sbjct: 411 GCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDP 470
Query: 474 LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPK 533
N +V L ++YA AG++ DV R M ++ + K PG S +EVD +++ F
Sbjct: 471 NNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNK-TPGWSMIEVDKIMYSFVAGEVQN 529
Query: 534 VVKEE 538
+ EE
Sbjct: 530 SITEE 534
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 187/494 (37%), Positives = 264/494 (53%), Gaps = 78/494 (15%)
Query: 106 NACKSSETNDTHSGKCLKLYKQMLCT-----GISPDCLTFPFLLKECTKRLDGL-VGASV 159
NA SS T+ + + +L G PD T P LK C + GL G
Sbjct: 81 NALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQA 140
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG-- 217
+ K G V VQN++++ + ACG AR +FDEM+ RDVVSW A++ + R G
Sbjct: 141 HAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGMF 200
Query: 218 --------DLDVALD--------------------------LFRRMKKRNIF-------- 235
++DV + FRR K+ N+
Sbjct: 201 MEALGVLAEMDVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDM 260
Query: 236 -----------------------SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
SW +I+G VQ R EALE+F MQ S VKPD
Sbjct: 261 YVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISG----VKPD 316
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
K+ +++VLSACA LGA++ G+WVH Y+ R G++ DV +GT++VDMY KCGC++ A +F+
Sbjct: 317 KVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQ 376
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
EMP K+ +W A+I+ FAL+G G+EA D F M A G+ PN VTF+ +L AC HSGLV++
Sbjct: 377 EMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQE 436
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
GR F +M Y + P HY CM+D+L RAGL EA +I++MPM P VF W LL C
Sbjct: 437 GRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSAC 496
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
Q HG ++ +++ ++ +L+ + YV L +MYA + R+ DV K R M E+G++KE P
Sbjct: 497 QAHGRMDFSQQILMHIHELESSGNGIYVLLSNMYAVSDRWADVGKARGFMNEKGMQKE-P 555
Query: 513 GCSSVEVDGVVHEF 526
G S +EV+G EF
Sbjct: 556 GSSVIEVNGKTCEF 569
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 185/471 (39%), Positives = 281/471 (59%), Gaps = 27/471 (5%)
Query: 63 HSLITRLLFFCALSVSGSL----------SYATNVFSHIKRSDLYTYNIMIRA-NACKSS 111
H+ + +L F L VS +L +A VF + DL ++N +I C+
Sbjct: 818 HARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCR-- 875
Query: 112 ETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD-GLVGASV-YGQVVKFGVC 169
+ L ++++M + D +T ++ CT + G+V A + Y + K V
Sbjct: 876 -----RYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEV- 929
Query: 170 DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
DV++ N++I ++ V AR +FD M +R++VSWNAMI+GY ++G+L A LF M
Sbjct: 930 -DVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDM 988
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
R++ SW S+I+ + Q G+ +A+ LFQEM + V KPD+IT+ASVLSACA++GA+
Sbjct: 989 PHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKV----KPDEITVASVLSACAHIGAL 1044
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
D G+ VH Y+R+ ++ D+ +G AL+DMY KCG VE+ VF+EM K+D+++WT++I+
Sbjct: 1045 DVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGL 1104
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A+NG A + F M EGVRP H TFVG+L ACAH+G+V+KG F M VY + P
Sbjct: 1105 AVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPE 1164
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI 469
+ HY C++D+LSR+G A I+ MPM+PDV VW LL Q+HGN+ L E + L+
Sbjct: 1165 MKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLL 1224
Query: 470 DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
+ DP N Y+ + YA + R++DV K R LM+E + K SSVE++
Sbjct: 1225 ETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKP-SASSSVEIN 1274
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 194/425 (45%), Gaps = 76/425 (17%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
I LL ALS + L A +F I R L +NIMIR S+TN + ++ Y
Sbjct: 732 IFNLLKSYALSPTNILK-ANELFRQIPRPTLSHWNIMIRG----WSQTN--QPIEAIRNY 784
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
M + + LT+PFLLK C R+ + +V+ +V+K G D+FV N++I +
Sbjct: 785 NLMYSQALFGNNLTYPFLLKACA-RISNVSCTTVHARVLKLGFDSDLFVSNALIHGYAGF 843
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
+ AR +FDEMS RD+VSWN++I GY R
Sbjct: 844 CELGFARKVFDEMSERDLVSWNSLICGYGRC----------------------------- 874
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
R E L +F+EM+ + VK D +T+ V+ AC LG + Y+ + ++
Sbjct: 875 --RRYSEVLVVFEEMRMAD----VKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVE 928
Query: 306 CDVVIGTALVDMYGKCGCVERA---------------------YG----------VFKEM 334
DV +G L+DMYG+ V+ A YG +F +M
Sbjct: 929 VDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDM 988
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
P +D ++WT+MIS ++ G +A F+EM V+P+ +T +LSACAH G ++ G
Sbjct: 989 PHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGE 1048
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
+R Y V +Y +ID+ + G + + M + D W +++ G +
Sbjct: 1049 AVHEYIRK-YDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMG-KRDSVSWTSVIAGLAV 1106
Query: 455 HGNVE 459
+G+ +
Sbjct: 1107 NGSAD 1111
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 290/493 (58%), Gaps = 24/493 (4%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C ++ L E H +I+K ++N + + G + +A +F + + D+
Sbjct: 176 CTDLEVLGEFHDEIVKGG-FESN----VFVGNGLVDMYAKRGCIEFARELFDKMPQRDVV 230
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
++N MI A ++ D LKL++++ D +T+ ++ + D
Sbjct: 231 SWNAMI-AGYVQNGLIEDA-----LKLFQEI----PKRDVITWNTMMAGYAQCGDVENAV 280
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++ ++ + ++ N++I+ ++ G V A LF M R+V+SWNA+I G+ ++G
Sbjct: 281 ELFEKMPE----QNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNG 336
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
++ AL LF+ M + N+ SWN++I G+ Q G+A AL+LF +MQ + KP+ T A
Sbjct: 337 QVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDM----KPNTETFA 392
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
VL ACA L ++ G H + RSG DV++G LV MY KCG +E A VF M ++
Sbjct: 393 IVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQ 452
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
D+ + +AMI +A+NG KE+ + F +M+ G++P+ VTFVG+LSAC H+GLV++GR F
Sbjct: 453 DSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYF 512
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+M Y + P + HY CMID+L RAG F EA LI MP++PD +WG+LL C+ H N
Sbjct: 513 DIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNN 572
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
++LGEKVAQ+LI L+P N A YV L ++YA AGR+DD+ RN MK+R ++K++ GCS +
Sbjct: 573 IDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKL-GCSWI 631
Query: 518 EVDGVVHEFSMKG 530
+ VH F + G
Sbjct: 632 VIKKQVHAFLVGG 644
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 195/374 (52%), Gaps = 30/374 (8%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKS--PCLQTNDHHSLITRLLFFCALSVSG 79
P+ + +L+ ++ K++ + K +H +I++ C + + L++ + L G
Sbjct: 62 PHSSTYDSLLQGCLN-AKSLPDAKLLHAHMIQTQFECQDISLGNKLVS---IYVKL---G 114
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
SL A VF + ++ ++ MI A A H + L + +M GI P+ T
Sbjct: 115 SLVEARRVFDEMPVKNVVSWTAMIAAYA------RHEHGQEALGFFYEMQDVGIQPNHFT 168
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
F +L CT D V + ++VK G +VFV N ++ ++ G + AR LFD+M
Sbjct: 169 FASILPACT---DLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMP 225
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
RDVVSWNAMI GY+++G ++ AL LF+ + KR++ +WN+++ G+ Q G A+ELF++
Sbjct: 226 QRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEK 285
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M ++ ++ ++++ G++ + + +V+ A++ +
Sbjct: 286 MPEQNL--------VSWNTMIAGYVQNGSVKEAFKLFQIMPER----NVISWNAVISGFA 333
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
+ G VE A +FK MP+ + ++W AMI+ ++ NG + A F +M+ ++PN TF
Sbjct: 334 QNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAI 393
Query: 380 LLSACAHSGLVEKG 393
+L ACA ++E+G
Sbjct: 394 VLPACAALAVLEQG 407
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 36/316 (11%)
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
+ ++ + GR REAL + Q+M VE + P T S+L C ++ K +H
Sbjct: 33 DGLVKSLCKQGRLREALHILQDM----VENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHA 88
Query: 298 YLRRSGLDC-DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
++ ++ +C D+ +G LV +Y K G + A VF EMP K+ ++WTAMI+ +A + +G+
Sbjct: 89 HMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQ 148
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACA--------HSGLVEKG--------------- 393
EA F EM+ G++PNH TF +L AC H +V+ G
Sbjct: 149 EALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMY 208
Query: 394 --RWCFVMMRHVYLVEPH--VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
R C R ++ P V + MI + GL +A +L + +P + DV W ++
Sbjct: 209 AKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP-KRDVITWNTMM 267
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G G+V E + + N + + Y + G + K +M ER +
Sbjct: 268 AGYAQCGDV---ENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVIS 324
Query: 510 EVPGCSSVEVDGVVHE 525
S +G V E
Sbjct: 325 WNAVISGFAQNGQVEE 340
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 183/510 (35%), Positives = 292/510 (57%), Gaps = 18/510 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+D +E+++IH ++ L+ +DH L+ + ALS L YA + ++
Sbjct: 13 LDSGITFKEVRQIHAKLYVDGTLK-DDH--LVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG--ISPDCLTFPFLLKECTKRLD 152
L+ N MIRA+ CKS K Y+++L +G + PD T FL++ CT
Sbjct: 70 TLFALNSMIRAH-CKSPVPE-----KSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRM 123
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
G V+G ++ G +D VQ +ISL+ G + S +F+ + D V AM+
Sbjct: 124 RETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTA 183
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
R GD+ A LF M +R+ +WN++I+G+ Q G +REAL +F MQ E VK +
Sbjct: 184 CARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL----EGVKVN 239
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+ + SVLSAC LGA+D G+W H Y+ R+ + V + T LVD+Y KCG +E+A VF
Sbjct: 240 GVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFW 299
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
M +K+ W++ ++ A+NG+G++ + F M+ +GV PN VTFV +L C+ G V++
Sbjct: 300 GMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDE 359
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G+ F MR+ + +EP + HY C++D+ +RAG +A +I+ MPM+P VW +LL
Sbjct: 360 GQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHAS 419
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
+M+ N+ELG ++ +++L+ NH YV L ++YA + +D+V R MK +G+RK+ P
Sbjct: 420 RMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQ-P 478
Query: 513 GCSSVEVDGVVHEFSM--KGSPKVVKEELV 540
GCS +EV+G VHEF + K PK + + V
Sbjct: 479 GCSVMEVNGEVHEFFVGDKSHPKYTQIDAV 508
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 195/542 (35%), Positives = 292/542 (53%), Gaps = 57/542 (10%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSY 83
K T+ A C+++R +K++H + L S + LLF A++V G++++
Sbjct: 4 KSGTQRRQPPAWRRCRSLRHIKQMHAVMALRGFLSDP---SELRELLFASAVAVRGAIAH 60
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG----ISPDCLT 139
A VF I R D + YN +IR A ++ + + LY +ML G + PD LT
Sbjct: 61 AYLVFDQIPRPDRFMYNTLIRGAAHTAAPRD------AVSLYTRMLRRGGGGGVRPDKLT 114
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF------------ 187
FPF+L+ CT G G V+ VVK G D FV+N++I + +CG
Sbjct: 115 FPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRA 174
Query: 188 -------------------VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRR 228
+ +AR LFDE +D+VSWN MI Y + GD+ +A +LF +
Sbjct: 175 REDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQ 234
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
+ +R++ SWN +I+G+V+ G ALELF++MQ KPD +T+ S+LSACA G
Sbjct: 235 VPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMG----EKPDIVTMLSLLSACADSGD 290
Query: 289 IDHGKWVHGYL----RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
+D G+ +H L R+G VV+G AL+DMY KCG ++ A+ VF M KD W +
Sbjct: 291 LDVGQRLHSSLSDMFSRNGF--PVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNS 348
Query: 345 MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
++ AL+G+ E+ D F +M VRP+ +TFV +L AC+H G+V+KGR F +M+H Y
Sbjct: 349 IVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKY 408
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
VEP++ HY CM+D+L RAGL EA I +M EP+ +W LL C++HG +EL +
Sbjct: 409 RVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHA 468
Query: 465 AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
+ L+ YV L ++YA G + +K R LM + G+ KE VDG V
Sbjct: 469 NRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKE---AGQTFVDGSVK 525
Query: 525 EF 526
+
Sbjct: 526 DI 527
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 179/475 (37%), Positives = 269/475 (56%), Gaps = 21/475 (4%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
++YA +F I ++ +N M R A S Y+++ C + + +
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGYAQSES-------------YREIFCEMFERNVVAW 47
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
++ D LV A ++ DV + N ++S ++ G + AR LF EM N
Sbjct: 48 TSMINGYILSAD-LVSAR---RLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPN 103
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
RDV+ WN ++ GY +G+++ LF M +RNIFSWN++I G+ G E L F+ M
Sbjct: 104 RDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRM 163
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
S E V P+ T+ +VLSACA LGA+D GKWVH Y SGL +V +G AL+DMY K
Sbjct: 164 LS---ESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAK 220
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG +E A VF+ M KD ++W +I A++ G +A + F +M+ G +P+ +TF+G+
Sbjct: 221 CGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGI 280
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
L AC H GLVE G F M YL+ P + HY CM+D+L+RAG +A +R MP+E
Sbjct: 281 LCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEA 340
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
D +W LLG C+++ NVEL E Q LI+L+P N A YV L ++Y AGR++DV + +
Sbjct: 341 DGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKV 400
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
M++ G +K +PGCS +EV+ V EF EE+ +L GL K++++ G+
Sbjct: 401 AMRDTGFKK-LPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGY 454
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 186/593 (31%), Positives = 321/593 (54%), Gaps = 82/593 (13%)
Query: 24 KESTKLILRNAI----DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
+ + KL L+N + K ++ +IH Q+I + + + L +S +
Sbjct: 3 QSTPKLQLKNPLLSLLQXSKTSSQILQIHAQLITTNLIS----DTFAASRLLDSVVSKTL 58
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
+++YA VF+ I + + + N M++ T + + L+ Y +M G+ D T
Sbjct: 59 NVNYAELVFAQIHQPNSFICNTMVKCY------TESSTPERALRFYAEMRKKGLLGDNYT 112
Query: 140 FPFLLKEC----------------TKR--------LDGLV------GASVYGQVVKFGVC 169
+PF+LK C KR ++GL+ G + + + V G
Sbjct: 113 YPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFS 172
Query: 170 D-DVFVQNSVISLFMACGF--------------------------------VTSARMLFD 196
+ D+ NS++ ++ CG V AR+ FD
Sbjct: 173 EKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFD 232
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
M RD+VSWN+MI GY + G+++VA ++F +M ++N+ SW+ +I G+ ++EAL L
Sbjct: 233 SMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNL 292
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F++M + KPD++++ +SAC+ LGA+D G+W+H Y++R+ + D+V+ TALVD
Sbjct: 293 FRQMLCQGI----KPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVD 348
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG + A +F MP+++ ++W MI +NG+GKEA + F +ME E + + +
Sbjct: 349 MYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLL 408
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
F+G+L AC+H+ LV +G F M+ VY +EP + HY C++D+L RAG + + +I+SM
Sbjct: 409 FLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSM 468
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
PM+P+ +WG+LL C++H NV L E V + L +L + YV + ++YA G ++ +
Sbjct: 469 PMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGML 528
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
+ R LMKER ++K++ G S +EVDG V EF +++EE+ L++ L+K+
Sbjct: 529 RIRKLMKERKMKKDI-GRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAKM 580
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 266/428 (62%), Gaps = 8/428 (1%)
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
ML GI PD LT+PFL K ++ L +G S++G V+K G D FV NS+I ++ +CG
Sbjct: 1 MLQVGIYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGD 60
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+ AR +FD +++VSWN+M+ GY + G LD+A LF M +R++ SW+ +I G+ +
Sbjct: 61 IVYARKVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKS 120
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
G +A+ +F++M++S K +++T+ SVL ACA+LGA+D G+ +H YL +G + +
Sbjct: 121 GNYGDAMAVFEKMRTSG----PKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELN 176
Query: 308 VVIGTALVDMYGKCGCVERAYGVFK--EMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
+V+ T+L+DMY KCG VE A+ VF+ + K D L W AMI A +G KE+ D + EM
Sbjct: 177 LVLRTSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEM 236
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
+ G++P+ +TF+ LLSACAH GLV++ + F + + P HYACM+D+++RAG
Sbjct: 237 QIAGIKPDEITFLCLLSACAHGGLVKQASYVFEGLGKNGMT-PKTEHYACMVDVMARAGQ 295
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDM 485
+EA + + MP+EP + GALL GC HG ++L E + + LI+LDP + YV L ++
Sbjct: 296 VAEAYQFLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNV 355
Query: 486 YAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNG 545
YA R+D+ + R M+ RG++K PG S +E+ G H F E++ +L+
Sbjct: 356 YAIGRRWDEARIMREAMERRGVKK-TPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLSF 414
Query: 546 LSKIMKNG 553
+ M+ G
Sbjct: 415 IVSQMQFG 422
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 174/421 (41%), Positives = 254/421 (60%), Gaps = 21/421 (4%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV--GASVYGQVVKFGVCDDVFVQNS 177
K ++ Y M+ + PD T LL C + GLV G V+ V+ G C +VFV S
Sbjct: 24 KAVECYTHMVSSKAEPDGFTHSSLLSACAR--GGLVKEGEQVHATVLVKGYCSNVFVDTS 81
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
+I+ + G V AR +FD M R VVSWN+M+ GY+R D D A +F M RN+ SW
Sbjct: 82 LITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRCADFDGARRVFDVMPCRNVVSW 141
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
+++ G + G++R+AL LF EM+ + VE D++ + + LSACA LG + G+W+H
Sbjct: 142 TTMVAGCARNGKSRQALLLFGEMRRACVE----LDQVALVAALSACAELGDLKLGRWIHW 197
Query: 298 YLR-----RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
Y++ R+ V + AL+ MY CG + AY VF +MP+K T++WT+MI FA
Sbjct: 198 YVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMPRKSTVSWTSMIMAFAKQ 257
Query: 353 GYGKEAFDTFREM-----EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
G GKEA D F+ M + +GVRP+ +TF+G+L AC+H+G V++G F M+H + +
Sbjct: 258 GLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVDEGHQIFASMKHTWGIS 317
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY 467
P + HY CM+D+LSRAGL EA LI +MP+ P+ +WGALLGGC++H N EL +V
Sbjct: 318 PSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGALLGGCRIHRNSELASQVENK 377
Query: 468 LI-DLDPLNHAFY-VNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHE 525
L+ +L+ A Y V L ++YA R+ DV R M E G++K PG S ++++GVVH
Sbjct: 378 LVPELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIEMGVKKP-PGRSWIQINGVVHN 436
Query: 526 F 526
F
Sbjct: 437 F 437
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 111/280 (39%), Gaps = 70/280 (25%)
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M N WN +I GY RS W +A+E +
Sbjct: 1 MDNPTTTVWNHVIRGYARSHT-----------------PW--------------KAVECY 29
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
M SS E PD T +S+LSACA G + G+ VH + G +V + T+L+
Sbjct: 30 THMVSSKAE----PDGFTHSSLLSACARGGLVKEGEQVHATVLVKGYCSNVFVDTSLITF 85
Query: 318 YGKCGCVERAYGVFKEMPK-------------------------------KDTLAWTAMI 346
Y G VERA VF MP+ ++ ++WT M+
Sbjct: 86 YAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRCADFDGARRVFDVMPCRNVVSWTTMV 145
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
+ A NG ++A F EM V + V V LSACA G ++ GRW ++ ++
Sbjct: 146 AGCARNGKSRQALLLFGEMRRACVELDQVALVAALSACAELGDLKLGRWIHWYVQQRFVA 205
Query: 407 ----EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
+P V +I + + G+ EA ++ MP + V
Sbjct: 206 RNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMPRKSTV 245
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 58/153 (37%), Gaps = 31/153 (20%)
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M T W +I +A + +A + + M + P+ T LLSACA GLV++G
Sbjct: 1 MDNPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEG 60
Query: 394 R----------WC---FV---------------MMRHVYLVEPH--VYHYACMIDILSRA 423
+C FV RHV+ P V + M+ R
Sbjct: 61 EQVHATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRC 120
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F A R+ MP +V W ++ GC +G
Sbjct: 121 ADFDGARRVFDVMPCR-NVVSWTTMVAGCARNG 152
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 295/527 (55%), Gaps = 22/527 (4%)
Query: 26 STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLIT-RLLFFCALSVSGSLSYA 84
S + L + + CKN+ + IH +II++ +D + + L+ C S S+ YA
Sbjct: 27 SRRKTLISVLRSCKNIAHVPSIHAKIIRT----FHDQDAFVVFELIRVC--STLDSVDYA 80
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
+VFS++ ++Y Y MI + S + LY +M+ + PD +L
Sbjct: 81 YDVFSYVSNPNVYLYTAMI------DGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVL 134
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
K C D V ++ QV+K G V ++ ++ G + +A+ +FDEM +RD V
Sbjct: 135 KAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 190
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
+ MI Y G + AL+LF+ +K ++ W ++I G V+ +ALELF+EMQ
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQM-- 248
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
E V ++ T VLSAC+ LGA++ G+WVH ++ ++ +G AL++MY +CG +
Sbjct: 249 --ENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDI 306
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
A VF+ M KD +++ MIS A++G EA + FR+M G RPN VT V LL+AC
Sbjct: 307 NEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNAC 366
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+H GL++ G F M+ V+ VEP + HY C++D+L R G EA R I ++P+EPD +
Sbjct: 367 SHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIM 426
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
G LL C++HGN+ELGEK+A+ L + + + YV L ++YA +G++ + + R M++
Sbjct: 427 LGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRD 486
Query: 505 RGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
GI KE PGCS++EVD +HEF + KE + L L++I++
Sbjct: 487 SGIEKE-PGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 278/505 (55%), Gaps = 21/505 (4%)
Query: 47 IHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRAN 106
IH ++K+ L H L T LL A + GS +A +F + L M RA+
Sbjct: 32 IHCLLLKAGLLHVGAH--LPTALL--SAYAALGSPDHARRLFDEMPEQGLVPRTAMARAH 87
Query: 107 ACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKEC------TKRLDGLVGASVY 160
+ + + ++ M+ G+ PD + L C T R + G ++
Sbjct: 88 VASG------QAAQAIAVFGDMVADGVFPDNVALAVALGACHGAGSWTARRN--PGKKIH 139
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+V G+ DVFV +I ++ CG + +R +FD+M +R ++WNAM+ Y R G +D
Sbjct: 140 ALIVTSGIEPDVFVSTELIRVYGECGKLAVSRRVFDDMPSRSTITWNAMLHQYARHGKVD 199
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A +LF M +R++ SWN+++ G+ GR REAL LF++M S S V P+ T++++L
Sbjct: 200 TAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPS-SCAVHPNVPTMSTIL 258
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK-DT 339
ACA G ++ G WVH Y+ R+ ++ D + L+DMY KCG ++ A VF++ P+K D
Sbjct: 259 GACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKRDL 318
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+WT +I A++G +A F M+ G+ P+ VT VG+L+ACAH GLV++G F
Sbjct: 319 FSWTTVICGLAMHGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYS 378
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + + P + HY CMID+L R G EA +IR+MPM+P+ +WGA L C++HGN+E
Sbjct: 379 MEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNME 438
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LG+ A+ L LDP + V L MYAKA + + + R M ++K PGCSS+E+
Sbjct: 439 LGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKK-TPGCSSIEL 497
Query: 520 DGVVHEFSMKGSPKVVKEELVLILN 544
G VHEF GS E+ +L
Sbjct: 498 KGEVHEFVAGGSQHPQYAEICSVLQ 522
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 290/525 (55%), Gaps = 31/525 (5%)
Query: 13 LNSPAKVSPPNKESTKLILRNA--------IDECKNMRELKEIHTQIIKSPCLQTNDHHS 64
+ P+ PN S L++ + +++ ++ IH Q+I+ N H
Sbjct: 26 FSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIR------NGHSQ 79
Query: 65 ---LITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
++ LL C S ++ YA+ +F + ++Y Y +I + +
Sbjct: 80 DPFMVFELLRSC--SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYL------EA 131
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
++LY +ML I PD +LK C +L G V+ + +K G + V+ ++ L
Sbjct: 132 IQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMEL 191
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG + AR +F+EM DVV+ MI Y G ++ A +F R+++++ W ++I
Sbjct: 192 YGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMI 250
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
GFV+ ALE F+ MQ E V+P++ TI VLSAC+ LGA++ G+WVH Y+R+
Sbjct: 251 DGFVRNEETNRALEAFRGMQG----ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK 306
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
++ ++ +G AL++MY +CG ++ A VF EM +D + + MIS ++NG ++A +
Sbjct: 307 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIEL 366
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR M +RP +VTFVG+L+AC+H GLV+ G F M Y VEP + HY CM+D+L
Sbjct: 367 FRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLG 426
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
R G EA LIR+M M PD + G LL C+MH N+ELGE+VA+ L D + YV
Sbjct: 427 RVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVL 486
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
L +YA +G++ + + R MKE G++KE PGCSS+EV+ +HEF
Sbjct: 487 LSHVYASSGKWKEAAQVRAKMKEAGMQKE-PGCSSIEVNNEIHEF 530
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 290/522 (55%), Gaps = 32/522 (6%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C R+L H ++ CL + + + T+++ C + G ++A VF+ I +L+
Sbjct: 20 CATFRDLLRAHGLAVRL-CLSQSSY--VATQIVHIC--NAHGRAAHAARVFAQIPAPNLH 74
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP--------DCLTFPFLLKECTK 149
+N MI+A A N H +++Y +ML P D T+PFLLK C
Sbjct: 75 LHNAMIKAYA-----QNHLHR-DAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACGA 128
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+G V+ V + G VQNS+I ++ CG +++AR FD M +DVVSWN +
Sbjct: 129 LAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNTL 188
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I + R G + A +LF M + + SW ++++G+ G A+E+F+ MQ E
Sbjct: 189 ISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFE--- 245
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
PD ++I +VL ACA LGA++ G+W++ Y + G+ V I AL++MY KCGC+E A
Sbjct: 246 -PDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQ 304
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSG 388
+F M +KD ++W+ I A +G +EA F M+ EG V PN +TFVGLLSAC+H+G
Sbjct: 305 LFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAG 364
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
LV++G M+ Y VEP V HY C++D+L R+G A IR MP+ PD +WG+L
Sbjct: 365 LVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSL 424
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
L C+ HG+VE A+ L++L+P + V L ++Y AGR+ +V TR ++ R R
Sbjct: 425 LSACRSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTR 484
Query: 509 KEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
K PGCS +EVD VV EF V ++L L G++ ++
Sbjct: 485 K-TPGCSMIEVDNVVREF-------VAGQDLGPELGGIATVL 518
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 276/477 (57%), Gaps = 11/477 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G ++ A VF I L ++N MI + S + + ++++M G+ PD
Sbjct: 183 GLITSARRVFDDISERTLVSWNSMING------YSKMGRSEEAVLMFREMQEVGLEPDVF 236
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T LL TK + +G V+ +V G+ D V N+++ ++ CG + A+ +FD+M
Sbjct: 237 TLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQM 296
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
++DVVSW MI Y G +D AL+ F +M +N+ SWNSII VQ G EA++LF
Sbjct: 297 LDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFY 356
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M S V + T+ ++LS+C+++G + GK H Y+ + + + A++DMY
Sbjct: 357 RMCDSGV----MANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMY 412
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG ++ A VF MP+K+ ++W +I AL+GYGKEA + F +M+A GV P+ +TF
Sbjct: 413 AKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFT 472
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
GLLSAC+HSGLV+ G+ F +M + + P V HYACM+D+L R GL EA LI+ MP+
Sbjct: 473 GLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPV 532
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+PDV VW ALLG C+ +GN+ +G+++ + L++L N YV L +MY+++ R+DD+K
Sbjct: 533 KPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNI 592
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++ + GI+K S +E+DG ++F + + +L L +K+ G+
Sbjct: 593 WKILDQNGIKK-CRAISFIEIDGCCYQFMVDDKRHGASTSIYSMLGQLMDHLKSAGY 648
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 144/484 (29%), Positives = 230/484 (47%), Gaps = 99/484 (20%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG---- 79
K T L ID+C ++++LK +H QII H L T++L L S
Sbjct: 32 KSPTHQTLHYLIDQCISLKQLKHVHAQIIL---------HGLATQVLTLGKLVSSSVQLR 82
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
L YA +F I + + + +N +I+ +N + K L LY++M+C GI P+ T
Sbjct: 83 DLRYAHKLFDQIPQPNKFMFNHLIKG------YSNSSDPIKSLLLYRRMVCDGILPNQFT 136
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
PF+LK C + +G V+ Q K G+ VQN+++++++ACG +TSAR +FD++S
Sbjct: 137 IPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDIS 196
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
R +VSWN+MI GY + G R+ EA+ +F+E
Sbjct: 197 ERTLVSWNSMINGYSKMG-------------------------------RSEEAVLMFRE 225
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
MQ +E PD T+ +LS G D G++VH ++ +G++ D ++ AL+DMY
Sbjct: 226 MQEVGLE----PDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYA 281
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY------------GK----------- 356
KCG ++ A VF +M KD ++WT MI+ +A +G GK
Sbjct: 282 KCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWC 341
Query: 357 --------EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
EA D F M GV N T V +LS+C+H G + G+ H Y+ +
Sbjct: 342 HVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGK-----QAHSYIFDN 396
Query: 409 HVYHYACM----IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG----NVEL 460
++ A + ID+ ++ G A + MP E + W ++G +HG +E+
Sbjct: 397 NITLSATLCNAIIDMYAKCGALQTAMDVFFGMP-EKNAVSWNVIIGALALHGYGKEAIEM 455
Query: 461 GEKV 464
EK+
Sbjct: 456 FEKM 459
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 291/525 (55%), Gaps = 31/525 (5%)
Query: 13 LNSPAKVSPPNKESTKLILRNA--------IDECKNMRELKEIHTQIIKSPCLQTNDHHS 64
+ P+ PN S L++ + K++ ++ IH Q+I+ N H
Sbjct: 26 FSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIR------NGHSQ 79
Query: 65 ---LITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
++ LL C S ++ YA+ +F + ++Y Y +I + +
Sbjct: 80 DPFMVFELLRSC--SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFD------A 131
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
++LY +ML I PD +LK C +L G V+ + +K G+ + V+ ++ L
Sbjct: 132 IQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMEL 191
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG + AR +F+EM DVV+ MI Y G ++ A +F R+++++ W ++I
Sbjct: 192 YGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMI 250
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
GFV+ ALE F+ MQ E V+P++ TI VLSAC+ LGA++ G+WVH Y+R+
Sbjct: 251 DGFVRNEEMNRALEAFRGMQG----ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK 306
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
++ ++ +G AL++MY +CG ++ A VF EM +D + + MIS ++NG ++A +
Sbjct: 307 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIEL 366
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR M +RP +VTFVG+L+AC+H GLV+ G F M Y VEP + HY CM+D+L
Sbjct: 367 FRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLG 426
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
R G EA LIR+M M PD + G LL C+MH N+ELGE+VA+ L D + YV
Sbjct: 427 RVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVL 486
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
L +YA +G++ + + R MKE G++KE PGCSS+EV+ +HEF
Sbjct: 487 LSHVYASSGKWKEAAQVRAKMKEAGMQKE-PGCSSIEVNNEIHEF 530
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/497 (37%), Positives = 285/497 (57%), Gaps = 17/497 (3%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P+ + IL+ A + E +++H I K L + + L C G+L
Sbjct: 85 PDNLTFPFILK-ACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAAC-----GNL 138
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
YA +VF + D+ ++N +I C S+ N L L+K M G+ D +T
Sbjct: 139 CYARSVFDEMVVKDVVSWNSLI----CGYSQCN--RFKDILALFKLMQNEGVKADKVTMI 192
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
++ CT+ D + + + + + DV++ N+++ F G + SA +F M R
Sbjct: 193 KVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVR 252
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
++V+ NAMI Y + D+ A +F ++ K+++ SW+S+I+G+ Q +ALE+F++MQ
Sbjct: 253 NIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQ 312
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
+ V KPD I IASV+S+CA+LGA+D GKWVH Y+RR+ + D ++ +L+DMY KC
Sbjct: 313 RAKV----KPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKC 368
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + A VFKEM +KDTL+W ++I A NG+ KE+ + F+ M EG RPN VTF+G+L
Sbjct: 369 GSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVL 428
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
ACA++ LVE+G F M+ +Y +EP + HY C++D+L RAG +A R I MP++PD
Sbjct: 429 IACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPD 488
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
VW LLG C HG+V + E V + L +L+P N Y L + YA A R+ + R
Sbjct: 489 PVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQC 548
Query: 502 MKERGIRKEVPGCSSVE 518
M + +RK PGCS+VE
Sbjct: 549 MADTDVRKS-PGCSAVE 564
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 210/448 (46%), Gaps = 80/448 (17%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M +K +H I S N H+++ L + L L +A VF I+ + +N
Sbjct: 1 MEAIKRLHAYYIVSGLY--NCHYAMSKVLRSYAILQ--PDLVFAHKVFDQIEAPTTFLWN 56
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL-VGASV 159
I+IR A + + + YK+ G+ PD LTFPF+LK C R++ L G +
Sbjct: 57 ILIRGLAQSDAPAD------AIAFYKKAQGGGMVPDNLTFPFILKACA-RINALNEGEQM 109
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ + K G+ D+FV NS+I L+ ACG + AR +FDEM +DVVSWN++I GY
Sbjct: 110 HNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGY------ 163
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
Q R ++ L LF+ MQ+ E VK DK+T+ V
Sbjct: 164 -------------------------SQCNRFKDILALFKLMQN----EGVKADKVTMIKV 194
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV--------- 330
+SAC LG ++ Y+ ++ DV +G LVD +G+ G ++ A V
Sbjct: 195 VSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNI 254
Query: 331 ----------------------FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
F ++PKKD ++W++MIS ++ + +A + FR+M+
Sbjct: 255 VTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRA 314
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
V+P+ + ++S+CAH G ++ G+W +R + + + +ID+ + G E
Sbjct: 315 KVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENS-LIDMYMKCGSAKE 373
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHG 456
A ++ + M E D W +++ G +G
Sbjct: 374 ALQVFKEMK-EKDTLSWNSIIIGLANNG 400
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 157/328 (47%), Gaps = 23/328 (7%)
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
DL A +F +++ F WN +I G Q +A+ +++ Q MV PD +T
Sbjct: 36 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGG---MV-PDNLTFP 91
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
+L ACA + A++ G+ +H ++ + GL D+ + +L+ +Y CG + A VF EM K
Sbjct: 92 FILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVK 151
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
D ++W ++I ++ K+ F+ M+ EGV+ + VT + ++SAC G +
Sbjct: 152 DVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADY-- 209
Query: 398 VMMRHV--YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
M+R++ Y +E VY ++D R G AE++ +M + ++ A++
Sbjct: 210 -MVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVR-NIVTMNAMIAAYAKG 267
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE----- 510
++ K+ + D ++ + ++ Y++A F D + M+ ++ +
Sbjct: 268 QDIVSARKIFDQIPKKDLIS---WSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIA 324
Query: 511 --VPGCS---SVEVDGVVHEFSMKGSPK 533
V C+ ++++ VHE+ + + K
Sbjct: 325 SVVSSCAHLGALDLGKWVHEYVRRNNIK 352
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/525 (35%), Positives = 299/525 (56%), Gaps = 20/525 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+D +E+++IH ++ L+ +DH L+ + + ALS L YA + +
Sbjct: 21 LDSGTTFKEIRQIHAKLYVDGTLK-DDH--LVGQFVKAVALSDHTYLDYANQILDRSDKP 77
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG--ISPDCLTFPFLLKECTKRLD 152
L+ N MIRA+ CKS K Y ++L +G + PD T FL++ CT
Sbjct: 78 TLFALNSMIRAH-CKSPVPE-----KSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGM 131
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
G V+G ++ G +D VQ +ISL+ G + S +F+ +S D V AM+
Sbjct: 132 RETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTA 191
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
R GD+ A LF M +++ +WN++I+G+ Q G +REAL LF MQ E VK +
Sbjct: 192 CARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQL----EGVKVN 247
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+++ SVLSAC LGA+D G+W H Y+ R+ + V +GT LVD+Y KCG +++A VF
Sbjct: 248 GVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFW 307
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
M +K+ W++ ++ A+NG+G++ F M+ +GV PN VTFV +L C+ G V++
Sbjct: 308 GMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDE 367
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G+ F MR+ + +EP + HY C++D+ +RAG +A +I+ MPM+ VW +LL
Sbjct: 368 GQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHAS 427
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
+M+ N+ELG ++ +++L+ NH YV L ++YA + +D+V R MK +G+RK+ P
Sbjct: 428 RMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQ-P 486
Query: 513 GCSSVEVDGVVHEFSM--KGSPKVVKEELVLILNGLSKIMKNGGF 555
GCS +EV+G VHEF + K PK E+ + +S+ ++ G+
Sbjct: 487 GCSVMEVNGEVHEFFVGDKSHPKY--NEIDAVWKDISRRLRLAGY 529
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 252/462 (54%), Gaps = 39/462 (8%)
Query: 94 SDLYTYNIMIR-ANACKSSETNDTHSGKCLKLYKQMLCT--GISPDCLTFPFLLKECTKR 150
S ++ I++R N + + GKC ++ +M+ + G P+ +TF ++ C
Sbjct: 591 SKIFNREIIVRDRNRFHHFKDGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHG 650
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
+ G ++G V+K GV ++V V N++++L
Sbjct: 651 GNKEEGVCIHGLVMKSGVLEEVKVVNALMNL----------------------------- 681
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
Y ++GDL + LF + +N+ SWN++I +Q G A E L F + + K
Sbjct: 682 --YGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGL----K 735
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD+ T +VL C +G + + +HG + G + + I TAL+D+Y K G +E + V
Sbjct: 736 PDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTV 795
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F E+ D++AWTAM++ +A +GYG++A F M G+ P+HVTF LL+AC+HSGLV
Sbjct: 796 FLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLV 855
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
E+GR+ F M Y +EP + HY+CM+D++ R+GL +A LI+ MPMEP VWGALLG
Sbjct: 856 EEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 915
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
C+++ + +LG K A+ L +L+P + Y+ L ++Y+ +G + D + RNLMK++G+ +
Sbjct: 916 ACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVR- 974
Query: 511 VPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
G S +E +H+F + E++ L + K MK+
Sbjct: 975 ASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKS 1016
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/426 (39%), Positives = 253/426 (59%), Gaps = 14/426 (3%)
Query: 105 ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECT---KRLDGLVGASVYG 161
A+ CKS H K + QM I P+ +TF LL C R G +++
Sbjct: 64 ADYCKSG-----HLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTAIHA 118
Query: 162 QVVKFGV-CDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
V K G+ +DV V ++I ++ CG V SAR+ FD+M R++VSWN MI GY+R+G +
Sbjct: 119 HVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGKFE 178
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
AL +F + +N SW ++I GFV+ EALE F+EMQ S V PD +T+ +V+
Sbjct: 179 DALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGV----APDYVTVIAVI 234
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
+ACA LG + G WVH + +V + +L+DMY +CGC++ A VF MP++ +
Sbjct: 235 AACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLV 294
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+W ++I FA+NG EA F M+ EG +P+ V++ G L AC+H+GL+ +G F M
Sbjct: 295 SWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHM 354
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+ V + P + HY C++D+ SRAG EA ++++MPM+P+ + G+LL C+ GN+ L
Sbjct: 355 KRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGL 414
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
E V YLI+LD + YV L ++YA G++D K R MKERGI+K+ PG SS+E+D
Sbjct: 415 AENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKK-PGFSSIEID 473
Query: 521 GVVHEF 526
+H+F
Sbjct: 474 SSIHKF 479
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 87/241 (36%), Gaps = 81/241 (33%)
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH------------- 386
++WT I+ + +G+ +A F +M + PNH+TF+ LLSACAH
Sbjct: 57 VSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTAI 116
Query: 387 --------------------------SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
G VE R F M LV + MID
Sbjct: 117 HAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVS-----WNTMIDGY 171
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGG----------------------------- 451
R G F +A ++ +P++ + W AL+GG
Sbjct: 172 MRNGKFEDALQVFDGLPVK-NAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTV 230
Query: 452 ------CQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRNLMKE 504
C G + LG V + ++ D N+ N L DMY++ G D ++ + M +
Sbjct: 231 IAVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQ 290
Query: 505 R 505
R
Sbjct: 291 R 291
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 284/533 (53%), Gaps = 71/533 (13%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPC------------------------- 56
PN + +L+ A + K RE ++IH ++K C
Sbjct: 101 PNSYTFPFLLK-ACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARK 159
Query: 57 -LQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETND 115
+ H +++ + +G + A +F I D+ ++N +I A ET +
Sbjct: 160 VFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYA----ETGN 215
Query: 116 THSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ 175
+ L+L+K+M+ T + PD T +L C + +G V+ + G ++ +
Sbjct: 216 YK--EALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIV 273
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
N++I L++ C G+++ A LF + +++
Sbjct: 274 NALIDLYIKC-------------------------------GEVETASGLFEGLSYKDVI 302
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SWN++I G+ +EAL LFQEM S P+++T+ S+L ACA+LGAID G+W+
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQEMLRSGES----PNEVTMLSILPACAHLGAIDIGRWI 358
Query: 296 HGYL--RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG 353
H Y+ R G+ + T+L+DMY KCG +E A VF M + +W AMI FA++G
Sbjct: 359 HVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHG 418
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
AFD F M +G+ P+ +TFVGLLSAC+HSG+++ GR F M Y + P + HY
Sbjct: 419 RANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHY 478
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP 473
CMID+L +GLF EAE +I SM M+PD +W +LL C+MHGNVELGE AQ LI ++P
Sbjct: 479 GCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEP 538
Query: 474 LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
N YV L ++YA AGR+++V K R L+ ++G++K VPGCSS+E+D VVHEF
Sbjct: 539 KNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKK-VPGCSSIEIDSVVHEF 590
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 238/424 (56%), Gaps = 16/424 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS-GSLSYATNVFSHIKR 93
+ CK ++ L+ IH ++IK+ TN +++L+ F LS L+YA +VF I+
Sbjct: 9 LHNCKTLQSLRIIHAKMIKTGLHNTN---YALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+L +N M R +A S + L LY M+ G+ P+ TFPFLLK C K
Sbjct: 66 PNLLIWNTMFRGHALSSDPVS------ALYLYVCMISLGLVPNSYTFPFLLKACAKSKAF 119
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G ++G V+K G D++V S+I++++ G AR +FD+ S+RDVVS+ A+I GY
Sbjct: 120 REGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGY 179
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
+G + A +F + +++ SWN++I+G+ + G +EALELF+EM ++ VKPD+
Sbjct: 180 ASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTN----VKPDE 235
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
T+ +VLSACA +I+ G+ VH ++ G ++ I AL+D+Y KCG VE A G+F+
Sbjct: 236 STMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEG 295
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
+ KD ++W +I + KEA F+EM G PN VT + +L ACAH G ++ G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIG 355
Query: 394 RWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
RW V + + + V +ID+ ++ G A+++ SM + + W A++ G
Sbjct: 356 RWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGF 414
Query: 453 QMHG 456
MHG
Sbjct: 415 AMHG 418
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 308/594 (51%), Gaps = 72/594 (12%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
PP++ + + + + CK +++ +I QII + Q N++ + +L+ CA
Sbjct: 32 PPHRLLEERFI-SLLQSCKTSKQVHQIQAQIIAN-GFQYNEY--ITPKLVTICA--TLKR 85
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
++YA +F I ++ +N M R A S + + L+ QM I P+C TF
Sbjct: 86 MTYARQLFDQIPDPNIALWNSMFRGYAQSESYR------EVVFLFFQMKGMDIRPNCFTF 139
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
P +LK C K + G V+ ++K G + FV ++I ++ A G V A +F EM
Sbjct: 140 PVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFE 199
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
R+VV+W +MI GY+ S DL A LF +R++ WN +++G+++GG EA +LF EM
Sbjct: 200 RNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEM 259
Query: 261 QSSSV-----------------------EEMVKPDKITIASVLSACAY------------ 285
+ V EEM + + + +++ A+
Sbjct: 260 PNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFK 319
Query: 286 ------------------------LGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
LGA+D GKWVH Y SGL +V +G AL+DMY KC
Sbjct: 320 RMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKC 379
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G +E A VF+ M KD ++W +I A++ G +A + F +M+ G +P+ +TF+G+L
Sbjct: 380 GIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGIL 439
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
AC H GLVE G F M YL+ P + HY CM+D+L+RAG +A +R MP+E D
Sbjct: 440 CACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEAD 499
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+W LLG C+++ NVEL E Q LI+L+P N A YV L ++Y AGR++DV + +
Sbjct: 500 GVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVA 559
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
M++ G +K +PGCS +EV+ V EF EE+ +L GL K++++ G+
Sbjct: 560 MRDTGFKK-LPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGY 612
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/572 (33%), Positives = 302/572 (52%), Gaps = 81/572 (14%)
Query: 10 YSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
Y+ L P + T + + C L+++H +II+ Q H +I++
Sbjct: 7 YTALTFPDYLPTLRSFDTTSSISTLLKACTTTSTLEQVHARIIRKGLHQ---DHFIISQF 63
Query: 70 LFFC-ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM 128
L C +LS + SY T+VF+ + +N I+ + + + L+ +M
Sbjct: 64 LTLCNSLS---NFSYTTSVFNGVSSPSTVLWNTYIKGY------SENYSVSLTVSLFIRM 114
Query: 129 LCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFV 188
+ PD T+P L+K C+K G + +G V+ GV DVFV S+I L+ CG +
Sbjct: 115 KRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEI 174
Query: 189 TSARMLFDEMSNRDVVSW-------------------------------NAMIIGYLRSG 217
AR +FDEM R+VVSW NA+I GY++ G
Sbjct: 175 LCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCG 234
Query: 218 DLDVALDLFRRMKKRNIFS-------------------------------WNSIITGFVQ 246
DL A +F M RN+ S W+++I+G+VQ
Sbjct: 235 DLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQ 294
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G+ EA+++F EM S +V KPD+ + S++SAC+ +G+++ KWV Y+R+S +D
Sbjct: 295 NGQPNEAVKIFLEMCSRNV----KPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDV 350
Query: 307 DVV-IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
+ AL+DM KCG ++RA +F+EMPK+D +++ +M+ +++G G +A F M
Sbjct: 351 HRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRM 410
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
EG+ P+ V F +L+AC+ +GLV++G + F M+ Y + P HYACM+D+L RAG
Sbjct: 411 LNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGR 470
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDM 485
EA L++SMP+EP WGALLG C++H ++ELGE VA L +L+P N YV L ++
Sbjct: 471 LKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNI 530
Query: 486 YAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
YA A ++ DV RN M+ERGIRK +PGCS +
Sbjct: 531 YAAAEQWLDVSLLRNKMRERGIRK-IPGCSWI 561
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 199/589 (33%), Positives = 297/589 (50%), Gaps = 82/589 (13%)
Query: 28 KLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNV 87
K +L ++I +CKN+R ++IH Q++ S + + S + FF G YA +
Sbjct: 5 KWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVME--FFANFVEYGD--YACDY 60
Query: 88 FSH-IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
R + +N +I + + +Y++M+ G PD TFP LLK
Sbjct: 61 LEQGNTRLGSFPFNSLI------NGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKA 114
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNS----------------------------- 177
C+ G V+G VVK G+ D +VQNS
Sbjct: 115 CSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSW 174
Query: 178 --VISLFMACGFVTSARMLFDEMS-----------------NRDV--------------- 203
+IS FM G A +F M N D+
Sbjct: 175 NSLISGFMKAGHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFK 234
Query: 204 ---VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
V NAM+ Y+++G A ++F + R+I SW +ITG VQ +++LELF M
Sbjct: 235 VNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMM 294
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
++ + PD I + SVLSACA LG +D G WVH Y+ + G+ D+ IGTA+VDMY K
Sbjct: 295 RTLGI----SPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAK 350
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CGC+E A +F M +++T W A++ A++G EA + F M GV+PN +TF+ +
Sbjct: 351 CGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAI 410
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
L+AC H GLV++GR F M +Y + P + HY CMID+ RAGL EA L R+MPM+P
Sbjct: 411 LTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKP 470
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
DV +WG LL C GN+EL ++ Y+++LD + +V L ++ A R+ +V + R
Sbjct: 471 DVLIWGLLLNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRR 530
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
LMK+RG+RK PG S +EVDG HEF + + EE+ +LN ++ +
Sbjct: 531 LMKDRGVRK-APGSSVIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSV 578
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/452 (37%), Positives = 272/452 (60%), Gaps = 11/452 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+GSL + F + ++ ++N MI A ++ E ++ L+ +M G+ D
Sbjct: 162 AGSLRDSRRFFGEMADRNVVSWNTMIGGYA-QAGEVSEA-----CALFGEMRHQGLLADV 215
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T LL C+ + VG V+ ++ G D + N+++ ++ CG + A FD
Sbjct: 216 FTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDM 275
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M ++VV+W +M+ + G +D D F +M +RNI SWN++I+ +VQ GR E L+L+
Sbjct: 276 MPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLY 335
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
M+S + PD+ T+A VLSAC G + GK +H Y+R + D V + +L+DM
Sbjct: 336 NRMRSLGI----TPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDM 391
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y +CG V+ A G+F EMP K+ ++W +I A++G +E FR M ++ P+ +TF
Sbjct: 392 YARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITF 451
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
VGLLSAC+H GL+E G + F M VY VEP V HY CM+D+L R G ++A LI+ M
Sbjct: 452 VGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMS 511
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
++PDV VWGALLG C++HGNVE+G+ V + L++L+ + +V +C+++ + +++D+KK
Sbjct: 512 IKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQWEDMKK 571
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMK 529
R LMKE+G +K++ G SS+EV ++HEF ++
Sbjct: 572 LRKLMKEQGTKKDM-GVSSIEVKNIIHEFGVE 602
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 213/460 (46%), Gaps = 81/460 (17%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF-FCALSV---SGSLSYATNVFSH 90
+ +C++++ L +IH ++ +D S+ ++L+ +C LS G L +A +F
Sbjct: 17 LRQCRSIQHLDQIHAHLVVHG---FSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDR 73
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
I D + YN ++RA +N + L+L++ +L GI P+ T PF+LK CT
Sbjct: 74 IPEPDRFMYNTLVRAY------SNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTV 127
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
+ +G VVK G +FV N+++ + G + +R F EM++R+VVSWN MI
Sbjct: 128 RAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMI 187
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY ++G++ A LF M+ + + +
Sbjct: 188 GGYAQAGEVSEACALFGEMRHQGLLA---------------------------------- 213
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG-------- 322
D T+ S+L AC+ G ++ G+ VH ++ SG D ++G AL+DMYGKCG
Sbjct: 214 -DVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRC 272
Query: 323 ----------------CVERAYGV-------FKEMPKKDTLAWTAMISVFALNGYGKEAF 359
C + +G F++MP+++ ++W AMIS + G E
Sbjct: 273 FDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETL 332
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
D + M + G+ P+ T G+LSAC +G + G+ +R + +P V ++D+
Sbjct: 333 DLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNF-NDPGVTLLNSLLDM 391
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+R G A L MP +V W ++G MHG +
Sbjct: 392 YARCGQVDTAIGLFTEMP-NKNVISWNVIIGALAMHGRAQ 430
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 135/298 (45%), Gaps = 13/298 (4%)
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
R G L A LF R+ + + F +N+++ + +EAL L + + ++ + P++
Sbjct: 60 RDGGLCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGV----LQRGILPNEF 115
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ VL AC + A++H HG + + G + + AL+ + G + + F EM
Sbjct: 116 TLPFVLKACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEM 175
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
++ ++W MI +A G EA F EM +G+ + T V LL AC+ G +E GR
Sbjct: 176 ADRNVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGR 235
Query: 395 WCFVMMRHVYLVEPHVYHY--ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
++ H+ + V ++D+ + G A R MP++ +V W ++L
Sbjct: 236 ---LVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIK-NVVTWTSMLCAQ 291
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
HG+V + V + + N + + Y + GR + N M+ GI +
Sbjct: 292 AKHGSV---DAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPD 346
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 185/588 (31%), Positives = 306/588 (52%), Gaps = 79/588 (13%)
Query: 13 LNSPAKVSPPNKESTKLILRNAIDE---CKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
+ S V P+ S++ I + + C N+ ++K++H QII+ N H L
Sbjct: 1 MTSSLPVRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRR-----NLHEDLHIAP 55
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
ALS+ + A VF+ ++ +++ N +IRA+A ++ + ++ +M
Sbjct: 56 KLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHA------QNSQPYQAFFVFSEMQ 109
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG--- 186
G+ D T+PFLLK C+ + V ++ + K G+ D++V N++I + CG
Sbjct: 110 RFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLG 169
Query: 187 ------------------------------FVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
+ AR LFDEM RD++SWN M+ GY R
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARC 229
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS------------ 264
++ A +LF +M +RN SW++++ G+ + G A +F +M +
Sbjct: 230 REMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG 289
Query: 265 -------------VEEMV----KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
V++MV K D + S+L+AC G + G +H L+RS L +
Sbjct: 290 YAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 349
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+ AL+DMY KCG +++A+ VF ++PKKD ++W M+ ++G+GKEA + F M
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
EG+RP+ VTF+ +L +C H+GL+++G F M VY + P V HY C++D+L R G
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLK 469
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
EA +++++MPMEP+V +WGALLG C+MH V++ ++V L+ LDP + Y L ++YA
Sbjct: 470 EAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYA 529
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM--KGSPK 533
A ++ V R+ MK G+ K G SSVE++ +HEF++ K PK
Sbjct: 530 AAEDWEGVADIRSKMKSMGVEKP-SGASSVELEDGIHEFTVFDKSHPK 576
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/518 (37%), Positives = 296/518 (57%), Gaps = 51/518 (9%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
++ L++IH +II + +T SLIT+LL F A + + +SY +F I + D + ++
Sbjct: 32 LKPLQQIHARIIITGLGRTR---SLITKLLSF-AYAAASPISYTRRLFFSIPKPDTFLFH 87
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+I + + + + L Y++ML IS TF ++K +G +++
Sbjct: 88 SLI------TLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIH 141
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
V G D +VQ +++S Y +SG +
Sbjct: 142 CHVYICGYGLDAYVQAALVSF-------------------------------YAKSGHVM 170
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
+A +F +M ++ + +WNS+I+G+ Q G +EA+ELF MQ V KPD T S+L
Sbjct: 171 IARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGV----KPDSSTFVSLL 226
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SACA +GAI G WVH Y+ R+ D +VV+GTAL++MY +CG V +A VF M +K+ +
Sbjct: 227 SACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIV 286
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
AWTAMIS + ++G+G +A + F EM +G RPN+VTFV +LSACAH+GLV++GR F M
Sbjct: 287 AWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTM 346
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM-PMEPDVFVWGALLGGCQMHGNVE 459
+ Y + P V H CM+D+L RAG +EA + I++ P EP VW A+LG C+MH N +
Sbjct: 347 KQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFD 406
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LG +VA++L+ ++P N YV L ++YA AGR D V+K RN+M ++KEV G S+++V
Sbjct: 407 LGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEV-GYSTIDV 465
Query: 520 DGVVHEFSM--KGSPKVVKEELVLILNGLSKIMKNGGF 555
D V+ FSM K PK ++ L L+ L + G+
Sbjct: 466 DHKVYLFSMGDKSHPKT--NQIYLYLDELMSRCREAGY 501
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/521 (34%), Positives = 282/521 (54%), Gaps = 20/521 (3%)
Query: 9 SYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITR 68
S LL S A +S L L + C +M L+++H ++KS + S R
Sbjct: 16 SPPLLPSSASISAFIASDPALTLLH--TRCASMAHLRQLHAALVKSGLAKDPIAAS---R 70
Query: 69 LLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM 128
+ FCA +SYA + H R + + +N +IRA ++ + L+ M
Sbjct: 71 AVAFCA-GPGRDVSYAERLVRHHPRPNSFMWNTVIRA------LSDGARPEAAVALFVDM 123
Query: 129 LCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFV 188
L + P+ T P LL + GA+++G +K G+ D +V+N+ I+++ +C
Sbjct: 124 LGSPTPPERRTLPSLLAAYARLGRAGDGAALHGMALKLGLAGDAYVRNATIAMYASCARA 183
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
A LF + D V+ N+ I+ R+G +D A +F M +R + +W+++++ + +
Sbjct: 184 DEALALFGQCPEFDAVACNSAIVALARAGRVDEARAVFDGMPERTVATWSAMVSAYARAA 243
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
R EAL LF MQ+ VE P+ + SVL CA LGA+D G WVH Y+ R G+ +
Sbjct: 244 RCGEALALFSAMQADGVE----PNANVLVSVLGCCASLGALDQGAWVHAYIDRHGVAMNA 299
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTL---AWTAMISVFALNGYGKEAFDTFREM 365
++ TALVDMY KCG V+ A VF + + +W +M+ A++G +EA F E+
Sbjct: 300 LVVTALVDMYCKCGSVDDARQVFDAARSQGSAKLSSWNSMMQGLAVHGQWREAVALFSEL 359
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
+ G+ P++VTF+ +L+A H+G+ ++ + F M + VEP + HY C++D L+RAG
Sbjct: 360 RSYGLSPDNVTFIAVLTAYGHAGMPDEAQAAFASMATEHSVEPGIEHYGCLVDALARAGR 419
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDM 485
EAE IRSMPM PD VWGALL GC++HG+ ELG + A+ + DP + YV +
Sbjct: 420 LREAEDAIRSMPMAPDAAVWGALLSGCRLHGDAELGARAAREAVRCDPRDSGAYVLAASV 479
Query: 486 YAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
A+ G R M+E G+ K VPGCS +EV+GVVHEF
Sbjct: 480 LARGGNPGRGAGVRGRMREAGVGK-VPGCSMIEVNGVVHEF 519
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/504 (36%), Positives = 293/504 (58%), Gaps = 30/504 (5%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG--SLSYATNVFSHIK 92
+++CK+M+ LK+ H Q+ + L+ N ++R+L FC+ SL+YA VF I+
Sbjct: 12 LEKCKSMKHLKQAHAQVFTTG-LENNTF--ALSRVLAFCSSHKHHHESLTYACRVFEQIQ 68
Query: 93 RSDLYTYNIMIRA----NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECT 148
+ YN +I+A N KS+ L+++ +ML + + PD T P++LK C
Sbjct: 69 NPTVCIYNTLIKAFLVNNKFKSA----------LQVFVKMLQSELKPDNYTIPYVLKACG 118
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
D G ++G K G+ D++V NS+++++ G V +AR +FDE+ + +VVSW+
Sbjct: 119 TFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSV 178
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
MI GY + GD+D A F +++ W ++I+G+VQ +E+L LF+ MQ + +
Sbjct: 179 MISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDI--- 235
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL-DCDVVIGTALVDMYGKCGCVERA 327
PD+ S+LSACA+LGA++ G W+H +L + L V + T+L+DMY KCG +E A
Sbjct: 236 -VPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELA 294
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
+F M +D + W AMIS A++G GK A F +ME GV+P+ +TF+ + +AC++S
Sbjct: 295 KRLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYS 354
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR----SMPMEPDVF 443
G+ +G M VY + P HY C++D+LSRAGLF EA +IR S +
Sbjct: 355 GMAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETL 414
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA-FYVNLCDMYAKAGRFDDVKKTRNLM 502
W A L C HG +L E A+ ++ LD H+ YV L ++YA +G+ D ++ R++M
Sbjct: 415 AWRAFLSACCNHGETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMM 474
Query: 503 KERGIRKEVPGCSSVEVDGVVHEF 526
K +G K PGCSSVE+DGV+ EF
Sbjct: 475 KIKGTNK-APGCSSVEIDGVISEF 497
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 300/552 (54%), Gaps = 48/552 (8%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
CK++ K+IH ++K L + +LL CA+S+S SL YA +F + D++
Sbjct: 15 CKSLTTFKQIHANVLK---LGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVF 71
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
+N +IR +D LK + + PD +F F++K VG
Sbjct: 72 MHNTLIRG-----LYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGI 126
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN----------------- 200
++ Q + G+ +FV ++IS++ CGFV AR +FDEM
Sbjct: 127 QLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGG 186
Query: 201 --------------RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
R+++SWN M+ GY ++G+L++A ++F M ++ SW+++I GF
Sbjct: 187 DMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAH 246
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G EA F+E+Q + +P++ ++ VLSACA GA++ GK +HG++ +SGL
Sbjct: 247 NGYFEEAFSFFRELQRKGM----RPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAW 302
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKE-MPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
V + AL+D Y KCG V A VF+ M +++ ++WT+M++ A++G+G+EA F +M
Sbjct: 303 IVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKM 362
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
E G+RP+ + F+ LL AC+H+GLVE+G F M+ +Y +EP + HY CM+D+ RAG
Sbjct: 363 EESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQ 422
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDM 485
+A + MP+ +W LLG C MHG+V+L E+V + L +LDP N + +V L +
Sbjct: 423 LQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNA 482
Query: 486 YAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSP--KVVKEELVLIL 543
YA AG++ D R M E+ I K PG S +EVD +++ F + G+ K+ +E +
Sbjct: 483 YAVAGKWKDAASVRRSMTEQRITK-TPGWSMIEVDKIMYTF-LAGTKQYKITEEAYKKLK 540
Query: 544 NGLSKIMKNGGF 555
+ ++ GG+
Sbjct: 541 EIIRRLRVEGGY 552
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/454 (37%), Positives = 273/454 (60%), Gaps = 26/454 (5%)
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
VF I+ +N MIRA+A S+T K ++ + QML T PD T+ FLL
Sbjct: 82 VFKDIQSPSTILWNQMIRAHA--RSQT----PAKSIQFFNQMLLTDSRPDAHTYSFLLAA 135
Query: 147 CTKRLDGLVGASVYGQVVKFGV-CDDVFVQNSVISLFMAC-----GFVTSARMLFDEMSN 200
CT L G V+ +V+ G +VF+ + +++ + A + SAR +FD+MS
Sbjct: 136 CTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSE 195
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
R+VV WN+M+ GY+R G+LD A +F M +RN+ SW ++I+G+ + G+ ++AL LF +M
Sbjct: 196 RNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQM 255
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD----VVIGTALVD 316
+ + VE D++ + + L+ACA LG + G W+H Y++ + + + V + AL+
Sbjct: 256 RKAGVE----LDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNALIH 311
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV---RPN 373
MY CG ++ AY VF+ MP++ ++WT++I+ FA GY + + FR M+ G RP+
Sbjct: 312 MYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPD 371
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
+TF+G+L AC+H+GLV++GR F M + ++P + HY CM+D+LSRAG EA+ LI
Sbjct: 372 GITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSRAGFLDEAQELI 431
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI-DLDPLNHAFYVN-LCDMYAKAGR 491
+MP++P+ VWGALLGGC+ + N EL V+Q L+ + DP A Y++ L +YA A +
Sbjct: 432 ATMPVKPNNAVWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLSLLAQVYASAEK 491
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHE 525
+ DV R M G++K G S V+++ V H+
Sbjct: 492 WQDVATVRQKMVAMGVKKPA-GQSWVQINEVFHD 524
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A+ VFK++ T+ W MI A + ++ F +M RP+ T+ LL+AC
Sbjct: 79 AHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAACTS 138
Query: 387 SGLVEKGRWCFVMM-------RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
S + +G+ + +V+L+ V YA ++ + A ++ M E
Sbjct: 139 SLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVG--GEGAALASARKVFDDMS-E 195
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
+V W ++L G GN++ ++ ++ N + + YAK G+ K+
Sbjct: 196 RNVVCWNSMLAGYMRRGNLDGARRI---FYEMPERNVVSWTTMISGYAKNGK---CKQAL 249
Query: 500 NLMKERGIRKEVPGCSSVEVDGVV 523
NL + +RK + VE+D VV
Sbjct: 250 NLFDQ--MRK-----AGVELDQVV 266
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/523 (35%), Positives = 289/523 (55%), Gaps = 21/523 (4%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ C R E+H ++++ L D ++ RL A + SG L + + +
Sbjct: 296 LTSCSTARRAAELHAAVLRTGLLDATDR-AVAFRLQR--AYAASGRLDLSLALLRRTRDP 352
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
Y I A++ + H L L ML G+ P T L C GL
Sbjct: 353 TAIFYTSAIHAHSSRG------HRLPALALLSDMLAQGLLPTAHTLSASLPACR----GL 402
Query: 155 V-GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM-SNRDVVSWNAMIIG 212
G +++G K + D +V +++ ++ G T+AR LFD+M + VVS AM+
Sbjct: 403 SPGRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTC 462
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y G LD A LF + ++ WN++I G+ Q GR EAL LF+ M S VE PD
Sbjct: 463 YADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVE----PD 518
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSG-LDCDVVIGTALVDMYGKCGCVERAYGVF 331
++T+ VLSA A LG ++ GKW+H Y++ S + V +GTAL+DMY KCG + A VF
Sbjct: 519 EVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVF 578
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+ KD + W AMI+ +A++G ++A + F + +G+ P +TF+GLL+AC+HSG+VE
Sbjct: 579 HGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVE 638
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+GR F M Y ++P + HY CM+D+L RAGL EA L++SM + PD +W +LL
Sbjct: 639 EGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAA 698
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C++H N+ LG+++A YL+ N Y+ L ++YA G + +V + R++MK GI+KE
Sbjct: 699 CRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKE- 757
Query: 512 PGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
PGCSS+E+D V+EF +E+ ++L+ ++ ++K G
Sbjct: 758 PGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHG 800
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/496 (36%), Positives = 291/496 (58%), Gaps = 27/496 (5%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+++C +MRE+K+IH I + + ++LL F A S L YA +FSHI
Sbjct: 11 LEQCSSMREMKQIHGHAITHGLARFA---FISSKLLAFYARS---DLRYAHTLFSHIPFP 64
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+L+ YN +I A + S + QML +SP+ TF LL + + L L
Sbjct: 65 NLFDYNTIITAFSPHYSSL----------FFIQMLNAAVSPNSRTFSLLLSKSSPSLPFL 114
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
++ +++ G D +V S+++ + G +AR LFD+ ++V W +++ GY
Sbjct: 115 --HQLHSHIIRRGHVSDFYVITSLLAAYSNHGSTRAARRLFDQSPYKNVACWTSLVTGYC 172
Query: 215 RSGDLDVALDLFRRM--KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+G ++ A +LF + ++RN S++++++G+V+ G RE ++LF+E++ + VKP+
Sbjct: 173 NNGLVNDARNLFDAIPERERNDVSYSAMVSGYVKNGCFREGIQLFRELK----DRNVKPN 228
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC--DVVIGTALVDMYGKCGCVERAYGV 330
+ASVLSACA +GA + GKW+H Y+ ++ C ++ +GTAL+D Y KCGCVE A V
Sbjct: 229 NSLLASVLSACASVGAFEEGKWIHAYVDQNKSQCYYELELGTALIDFYTKCGCVEPAQRV 288
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F M KD AW+AM+ A+N +EA + F EME G RPN VTF+G+L+AC H L
Sbjct: 289 FGNMKTKDVAAWSAMVLGLAINAKNQEALELFEEMEKVGPRPNAVTFIGVLTACNHKDLF 348
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
+ F M Y + + HY C++D+L+R+G EA I+SM +EPD +WG+LL
Sbjct: 349 GEALKLFGYMSDKYGIVASIEHYGCVVDVLARSGKIEEALEFIKSMEVEPDGVIWGSLLN 408
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
GC +H N+ELG KV +YL++L+P + YV L ++YA G+++ V +TR MK+RG+
Sbjct: 409 GCFLHNNIELGHKVGKYLVELEPGHGGRYVLLSNVYATMGKWEAVLETRKFMKDRGV-PA 467
Query: 511 VPGCSSVEVDGVVHEF 526
V G S +E+ VH+F
Sbjct: 468 VSGSSFIEIHQTVHKF 483
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 273/474 (57%), Gaps = 12/474 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F + D+ ++N M+ A+A + + L+ Y + GI +
Sbjct: 140 GMIKPARKLFDKMPEKDVVSWNTMVIAHA------QCGYWDEALRFYSEFRQLGIQCNGF 193
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+F +L C K + + V+GQ++ G +V + +SV+ ++ CG + AR LFDEM
Sbjct: 194 SFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEM 253
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
S RDV++W M+ GY + GD+ A +LF M ++N SW ++I+G+ + G +ALELF
Sbjct: 254 SARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFT 313
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+M V +PD+ T +S L ACA + ++ HGK +H YL R + ++ +AL+DMY
Sbjct: 314 KMMLFHV----RPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMY 369
Query: 319 GKCGCVERAYGVFKEMPKK-DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
KCG + VF M K D + W +IS A +G G+EA +M G +P+ +TF
Sbjct: 370 SKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITF 429
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V +L+AC+HSGLV++G F M Y + P HYAC+ID+L RAG F E + MP
Sbjct: 430 VVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMP 489
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+PD VW ALLG C++HG++ELG K A+ LI+L+P + YV L +YA GR++ V+K
Sbjct: 490 YKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQK 549
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
R LM ER ++KE S +E++ VH FS+ S +KE++ +L L+ M+
Sbjct: 550 VRQLMNERQVKKE-RAISWLEIENKVHSFSVSDSSHPLKEQIYSVLEQLAGQME 602
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 186/400 (46%), Gaps = 53/400 (13%)
Query: 108 CKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG 167
CK ++ N+ S + + G+ D T LL+ C G V+ + G
Sbjct: 35 CKKNKLNEAVSS-----LENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTG 89
Query: 168 VC-DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLF 226
+ F+ N +I+++ CG AR +FD+MS R++ SWN M+ GY + G + A LF
Sbjct: 90 LKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLF 149
Query: 227 RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
+M ++++ SWN+++ Q G EAL + E + ++ + + A VL+ C L
Sbjct: 150 DKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQ----CNGFSFAGVLTVCVKL 205
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC----------------------- 323
+ + VHG + +G +VV+ ++++D Y KCG
Sbjct: 206 KEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMV 265
Query: 324 --------VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
++ A +F EMP+K+ ++WTA+IS +A NG G +A + F +M VRP+
Sbjct: 266 SGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQF 325
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAGLFSEAER 431
TF L ACA ++ G+ H YL+ +P+ + +ID+ S+ G +
Sbjct: 326 TFSSCLCACASIASLKHGKQI-----HAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRK 380
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
+ M + DV +W ++ HG GE+ Q L D+
Sbjct: 381 VFDLMGNKLDVVLWNTIISALAQHG---CGEEAIQMLDDM 417
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 201/573 (35%), Positives = 295/573 (51%), Gaps = 90/573 (15%)
Query: 30 ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG-SLSYATNVF 88
+ ++++ CK++ LK+IH IK+P L + LI +L+F + S S L Y ++
Sbjct: 8 LFSHSLNSCKSISHLKQIHGVAIKTPSLSLPN---LIPKLIFLSSSSSSSPDLFYIRSIL 64
Query: 89 ---SHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
SH + L N +IR S + ++ + ++ +ML G+ PD T P +LK
Sbjct: 65 LTHSHDAQFCLSLCNAIIR------SISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLK 118
Query: 146 --------------ECTKRLDGLVGASVYGQ---VVKFGVCD---------------DVF 173
G+VG +VY + + VC D+
Sbjct: 119 ALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLV 178
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSN--------------------------------- 200
++I F G + A F EM +
Sbjct: 179 SWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYI 238
Query: 201 -------RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
DV NA++ YL+ DL+ A +F M +N+ +WN++I+G GR REA
Sbjct: 239 RHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREA 298
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
L+ F+ MQ ++ VKPD++T+ VL++CA LG ++ GKWVH Y+RR+ + D +G A
Sbjct: 299 LDTFRMMQ----DKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNA 354
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
L+DMY KCG ++ A+ VF+ M ++D ++TAMI AL+G AF F EM G+ PN
Sbjct: 355 LLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPN 414
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
VTF+GLL AC+H GLV +G+ F M Y + P HY CMID+L RAGL EAE +I
Sbjct: 415 EVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEII 474
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
M + PDVF GALLG C++HGNV++GE V Q L +LDP Y+ + ++Y+ R+
Sbjct: 475 HKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWK 534
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
D K R MK + +RK PGCS +EVDGVVHEF
Sbjct: 535 DALKIRKTMKNKKMRK-TPGCSLIEVDGVVHEF 566
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 283/541 (52%), Gaps = 75/541 (13%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A VF I + +N M R + N++H + L++QM + P+C TFP +
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYS-----QNESHK-DVIVLFRQMKGLDVMPNCFTFPVI 57
Query: 144 LKECTK-------------------RLDGLVGAS----------------VYGQVVKFGV 168
LK C K R + V + V+G++++ V
Sbjct: 58 LKSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNV 117
Query: 169 -------------CD--------------DVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
CD D+ + N++IS ++ V AR LFD+M N+
Sbjct: 118 IAWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNK 177
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
DV+SWN ++ GY +GD+ LF M +RN+FSWN++I G+ + G E L F+ M
Sbjct: 178 DVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRML 237
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
V+ V P+ T+ +VLSACA LGA+D GKWVH Y G +V + AL+DMY KC
Sbjct: 238 ---VDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKC 294
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G VE A VFK M KD ++W +I A++G+G +A + F M+ G P+ +TF+G+L
Sbjct: 295 GVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGIL 354
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
AC H GLVE G F M Y + P + HY C++D+L RAGL + A IR MP+E D
Sbjct: 355 CACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEAD 414
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+W ALLG C+++ NVEL E + LI+ +P N A YV L ++Y GR+ DV + +
Sbjct: 415 AVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVA 474
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRG 561
M++ G +K +PGCS +EV+ + EF KE++ L L+K++++ G Y+ G
Sbjct: 475 MRDTGFKK-LPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRSSG---YVPG 530
Query: 562 L 562
L
Sbjct: 531 L 531
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 32/285 (11%)
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
++ A +F ++ + N WN++ G+ Q ++ + LF++M+ V P+ T
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLD----VMPNCFTFPV 56
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+L +C + A+ G+ VH ++ +SG + + T L+DMY G + AY VF EM +++
Sbjct: 57 ILKSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERN 116
Query: 339 TLAWTAMISVFALNGY--------GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
+AWTAMI NGY + FD E + V + ++S + V
Sbjct: 117 VIAWTAMI-----NGYITCCDLVTARRLFDLAPERDI-------VLWNTMISGYIEAKDV 164
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
+ R F M + V + +++ + G ERL MP E +VF W AL+G
Sbjct: 165 IRARELFDKMPN-----KDVMSWNTVLNGYASNGDVMACERLFEEMP-ERNVFSWNALIG 218
Query: 451 GCQMHGNV-ELGEKVAQYLIDLDPL-NHAFYVNLCDMYAKAGRFD 493
G +G E+ + L+D + N A VN+ A+ G D
Sbjct: 219 GYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALD 263
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 185/519 (35%), Positives = 294/519 (56%), Gaps = 51/519 (9%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
CKN R L +IH ++ + + + S++ L++ +LSV G+L YA +F I + D+
Sbjct: 22 CKNFRTLMQIHAFMVVNGLMS---NLSVVGELIYSASLSVPGALKYAHKLFEEIPKPDVS 78
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
N ++R +A K + LY +M G+SPD TF F+LK C+K G
Sbjct: 79 ICNHVLRGSA------QSLKPEKTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGF 132
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACG--------FVTSARM---------------- 193
+++G+VV+ G + +V+N++I CG F SA+
Sbjct: 133 AIHGKVVRHGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRG 192
Query: 194 -------LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
LFDEM ++D V+WN MI G L+ ++D A +LF R ++++ +WN++I+G+V
Sbjct: 193 KIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGYVN 252
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY-LRRSGLD 305
G +EAL +F+EM+ + PD +TI S+LSACA LG ++ GK +H Y L + +
Sbjct: 253 CGYPKEALSIFKEMRDAGEH----PDVVTILSLLSACAVLGDLETGKRLHIYILETASVS 308
Query: 306 CDVVIGT----ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
+ +GT AL+DMY KCG ++RA VF+ M +D W +I AL+ + + + +
Sbjct: 309 SSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALH-HAEGSVEM 367
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F EM+ V PN VTF+G++ AC+HSG V++GR F +MR +Y +EP++ HY CM+D+L
Sbjct: 368 FEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLG 427
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAGL EA + SM +EP+ VW LLG C+++GNVELG+ + L+ + YV
Sbjct: 428 RAGLLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVL 487
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
L ++YA G++D V+K R + + ++K G S +E D
Sbjct: 488 LSNIYASTGQWDGVQKVRKMFDDTRVKKPT-GISLIEED 525
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 181/519 (34%), Positives = 292/519 (56%), Gaps = 22/519 (4%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C R E+H +++ + ++ RL A + SG L ++ + K
Sbjct: 34 CSTARRASELHAAVVRK---GLDSDRAVAFRLQR--AYAASGRLDHSLTLLGRTKDPTTI 88
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL-VG 156
Y I A++ + L L ML G+ P T L C GL +G
Sbjct: 89 FYTSAIHAHSSRGLHLPG------LALLSDMLSEGLLPTAHTLSASLPACR----GLSLG 138
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
+++ K + D +V +++S++ G +AR LFDEM + VVS AM+ Y
Sbjct: 139 RALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANM 198
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G LD A LF + +++ WN++I G+ Q G+ EAL+LF+ M SS E PD++T+
Sbjct: 199 GALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAE----PDEVTV 254
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSG-LDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
VLSA A LG ++ GKW+H Y++ S + +V + TALVDMY KCG +E A VF +
Sbjct: 255 VLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIG 314
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
KD + W AMI+ +A++G ++A + F ++ +G+ P +TF+GLL+AC+HSGLVE+GR
Sbjct: 315 NKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRS 374
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M H Y ++P + HY CM+D+L RAGL EA L++S+ + PD +W +LL C++H
Sbjct: 375 FFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLH 434
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
N+ LG+++A +L+ N Y+ L ++YA G++++V + R++MK GI+KE PGCS
Sbjct: 435 KNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKE-PGCS 493
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
++E+D V+EF +E+ +L+ ++ ++K G
Sbjct: 494 AIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHG 532
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 18 KVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL-FFCALS 76
+ S E T +++ +A+ + + K +H+ + S C+Q N + T L+ +C
Sbjct: 244 RSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVR--VATALVDMYCK-- 299
Query: 77 VSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPD 136
GSL A VF I D+ +N MI A S K L+++ Q+ G+ P
Sbjct: 300 -CGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGD------SRKALEMFVQLRDQGLWPT 352
Query: 137 CLTFPFLLKECTKRLDGLV--GASVYGQVV-KFGVCDDVFVQNSVISLFMACGFVTSARM 193
+TF LL C+ GLV G S + + ++G+ + ++ L G + A
Sbjct: 353 DITFIGLLNACSH--SGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFH 410
Query: 194 LFDEMS-NRDVVSWNAMI 210
L ++ D V W +++
Sbjct: 411 LVQSLTITPDAVMWVSLL 428
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 296/541 (54%), Gaps = 52/541 (9%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P T+ + I K + +L +IH QII + SLIT L + S+ S+
Sbjct: 75 PPTTPTEAHFISLIHGSKTILQLHQIHAQII----IHNLSSSSLITTQLISSS-SLRKSI 129
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
+++ VF+H K +L+T+N +IR T ++H + ++ ML +GI PD LT+P
Sbjct: 130 NHSLAVFNHHKPKNLFTFNALIRG------LTTNSHFFNAIFHFRLMLRSGIKPDRLTYP 183
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE---- 197
F+LK +G +++ +++ G+ D FV+ S++ +++ + SA +FDE
Sbjct: 184 FVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPER 243
Query: 198 --------------------------------MSNRDVVSWNAMIIGYLRSGDLDVALDL 225
M ++ VSW+ +I G+ ++GD+D A++L
Sbjct: 244 FDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMEL 303
Query: 226 FRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY 285
F +M ++N+ SW +++ GF + G + +AL +F +M +EE V+P+ TI S LSACA
Sbjct: 304 FDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKM----LEEGVRPNAFTIVSALSACAK 359
Query: 286 LGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAM 345
+G ++ G +H Y++ +GL +GTALVDMY KCG +E A VF E +K WT M
Sbjct: 360 IGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVM 419
Query: 346 ISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL 405
I +A++G+ ++A F++M G++P+ V F+ LL+AC HSG V+ G F MR Y
Sbjct: 420 IWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYC 479
Query: 406 VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVA 465
+EP + HY ++D+L R+G EA R I MPM PD +WGAL C+ H ++ +
Sbjct: 480 IEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFAL 539
Query: 466 QYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHE 525
L+ L+P + Y+ L + YA G+++D ++ R LM+ RG+ K G S +EV+G VH
Sbjct: 540 NKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKN-SGWSCIEVEGQVHR 598
Query: 526 F 526
F
Sbjct: 599 F 599
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 184/497 (37%), Positives = 285/497 (57%), Gaps = 17/497 (3%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P+ + IL+ A + E +++H I K L + + L C G+L
Sbjct: 550 PDNLTFPFILK-ACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAAC-----GNL 603
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
YA +VF + D+ ++N +I C S+ N L L+K M G+ D +T
Sbjct: 604 CYARSVFDEMVVKDVVSWNSLI----CGYSQCNRFKD--ILALFKLMQNEGVKADKVTMI 657
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
++ CT+ D + + + + + DV++ N+++ F G + SA +F M R
Sbjct: 658 KVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVR 717
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
++V+ NAMI Y + D+ A +F ++ K+++ SW+S+I+G+ Q +ALE+F++MQ
Sbjct: 718 NIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQ 777
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
+ V KPD I IASV+S+CA+LGA+D GKWVH Y+RR+ + D ++ +L+DMY KC
Sbjct: 778 RAKV----KPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKC 833
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + A VFKEM +KDTL+W ++I A NG+ KE+ + F+ M EG RPN VTF+G+L
Sbjct: 834 GSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVL 893
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
ACA++ LVE+G F M+ +Y +EP + HY C++D+L RAG +A R I MP++PD
Sbjct: 894 IACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPD 953
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
VW LLG C HG+V + E V + L +L+P N Y L + YA A R+ + R
Sbjct: 954 PVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQC 1013
Query: 502 MKERGIRKEVPGCSSVE 518
M + +RK PGCS+VE
Sbjct: 1014 MADTDVRKS-PGCSAVE 1029
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 238/422 (56%), Gaps = 6/422 (1%)
Query: 106 NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVK 165
+A + ++ H L+L++ + D F F LK C ++G VV+
Sbjct: 59 HALLKAYSHGPHPQDALQLFRHARWHA-ADDTYAFTFALKACAGLGWPRCCMQLHGLVVR 117
Query: 166 FGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDL 225
G +V +++++++ CG + +RM F+EM ++ VSWN +I G+ G+++ A L
Sbjct: 118 KGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWGEVEYARLL 177
Query: 226 FRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY 285
F RM RN+ SW+ +I G+ + R EA+ LF+ M + E + P +IT+ +V+ A +
Sbjct: 178 FERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMA----EGISPSEITVLAVVPALSN 233
Query: 286 LGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM-PKKDTLAWTA 344
+G I G+ +HGY + GL DV +G +L+D+Y K G ++ + VF EM +++ ++WT+
Sbjct: 234 VGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTS 293
Query: 345 MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
+IS FA++G +A + F +M G+RPN +TF+ +L AC+H GLVE+G F M + Y
Sbjct: 294 IISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEY 353
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
+ P V H+ C+ID+L RAG EAE++IR P+E + VW LLG C +G VE+GE+
Sbjct: 354 NINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERT 413
Query: 465 AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
+ ++ L+ +V L +M + RF D + R L+ +R K +E +H
Sbjct: 414 MKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKSFFNIVRMEAIKRLH 473
Query: 525 EF 526
+
Sbjct: 474 AY 475
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 215/460 (46%), Gaps = 83/460 (18%)
Query: 32 RNAIDECKN---MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVF 88
RN++ N M +K +H I S N H+++ L + L L +A VF
Sbjct: 454 RNSVKSFFNIVRMEAIKRLHAYYIVSGLY--NCHYAMSKVLRSYAILQ--PDLVFAHKVF 509
Query: 89 SHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECT 148
I+ + +NI+IR A + + + YK+ G+ PD LTFPF+LK C
Sbjct: 510 DQIEAPTTFLWNILIRGLAQSDAPAD------AIAFYKKAQGGGMVPDNLTFPFILKACA 563
Query: 149 KRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWN 207
R++ L G ++ + K G+ D+FV NS+I L+ ACG + AR +FDEM +DVVSWN
Sbjct: 564 -RINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWN 622
Query: 208 AMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
++I GY Q R ++ L LF+ MQ+ E
Sbjct: 623 SLICGY-------------------------------SQCNRFKDILALFKLMQN----E 647
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
VK DK+T+ V+SAC LG ++ Y+ ++ DV +G LVD +G+ G ++ A
Sbjct: 648 GVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSA 707
Query: 328 YGV-------------------------------FKEMPKKDTLAWTAMISVFALNGYGK 356
V F ++PKKD ++W++MIS ++ +
Sbjct: 708 EKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFS 767
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
+A + FR+M+ V+P+ + ++S+CAH G ++ G+W +R + + + +
Sbjct: 768 DALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENS-L 826
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
ID+ + G EA ++ + M E D W +++ G +G
Sbjct: 827 IDMYMKCGSAKEALQVFKEMK-EKDTLSWNSIIIGLANNG 865
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 157/328 (47%), Gaps = 23/328 (7%)
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
DL A +F +++ F WN +I G Q +A+ +++ Q MV PD +T
Sbjct: 501 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGG---MV-PDNLTFP 556
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
+L ACA + A++ G+ +H ++ + GL D+ + +L+ +Y CG + A VF EM K
Sbjct: 557 FILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVK 616
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
D ++W ++I ++ K+ F+ M+ EGV+ + VT + ++SAC G +
Sbjct: 617 DVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADY-- 674
Query: 398 VMMRHV--YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
M+R++ Y +E VY ++D R G AE++ +M + ++ A++
Sbjct: 675 -MVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVR-NIVTMNAMIAAYAKG 732
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE----- 510
++ K+ + D ++ + ++ Y++A F D + M+ ++ +
Sbjct: 733 QDIVSARKIFDQIPKKDLIS---WSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIA 789
Query: 511 --VPGCS---SVEVDGVVHEFSMKGSPK 533
V C+ ++++ VHE+ + + K
Sbjct: 790 SVVSSCAHLGALDLGKWVHEYVRRNNIK 817
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 37/256 (14%)
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
R W++++ + G ++AL+LF+ + + + D L ACA LG
Sbjct: 53 RRPTPWHALLKAYSHGPHPQDALQLFRHARWHAAD-----DTYAFTFALKACAGLGWPRC 107
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA- 350
+HG + R G + + TALV++Y CGC+ + F+EMP K+ ++W +I+ FA
Sbjct: 108 CMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAG 167
Query: 351 -------------------------LNGYGK-----EAFDTFREMEAEGVRPNHVTFVGL 380
++GY + EA FR M AEG+ P+ +T + +
Sbjct: 168 WGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAV 227
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
+ A ++ G + G LV V +ID+ ++ G + R+ M
Sbjct: 228 VPALSNVGKILIGEALHGYCEKEGLVW-DVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRR 286
Query: 441 DVFVWGALLGGCQMHG 456
++ W +++ G MHG
Sbjct: 287 NLVSWTSIISGFAMHG 302
>gi|242045040|ref|XP_002460391.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
gi|241923768|gb|EER96912.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
Length = 573
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 169/437 (38%), Positives = 258/437 (59%), Gaps = 7/437 (1%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVIS 180
L+L+ +L +G PD + L C + D A ++ K G + V+ ++
Sbjct: 63 LRLFDHLLRSGADPDPAAYELALASCARGKDRATAAQLHAHAAKRGFLASHRRVRCRLVH 122
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG-DLDVALDLFRRMKKRNIFSWNS 239
+ CG + AR +FD ++ D+V+WN ++ GY + G D D+ D F RM R+ SWN+
Sbjct: 123 AYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDADLLRDFFARMPSRDSVSWNT 182
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+++ V G EA+ +F+EM +S + +PD++T+ SV+SA AYLGA+ G W H Y+
Sbjct: 183 VLSLCVVNGEYDEAIAVFREMLAS---QECQPDRVTLVSVVSAIAYLGALAQGLWAHAYV 239
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL-AWTAMISVFALNGYGKEA 358
R G++ + + +AL++MY KCG +E A VF + K +L W AM++ F NG A
Sbjct: 240 IRKGVEVEEKLSSALINMYSKCGFLEGAVYVFDNVRGKRSLDTWNAMLAGFTANGCSGRA 299
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F ME G+ PN +TF +L+AC+H GLVE+G CF M VY +EP + HY CM+D
Sbjct: 300 LALFTRMETTGLMPNKITFNCILNACSHGGLVEEGMRCFQRMSRVYGIEPDIAHYGCMVD 359
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+ RAG+F +AE +I+ MPMEPD + ALLG C+ H N+ELG+K LI+ P +HA
Sbjct: 360 LFCRAGMFEKAEEIIQIMPMEPDASMLKALLGACRTHKNLELGKKAGHRLIEAAPNDHAG 419
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
YV L ++YA G + V K R LM +RG+ K PG SSVE++GV+HEF K +
Sbjct: 420 YVLLSNIYALDGNWGRVHKVRKLMLDRGVLK-TPGSSSVELNGVIHEFISGDKSHSRKRD 478
Query: 539 LVLILNGLSKIMKNGGF 555
+ +L+ + + +K+ G+
Sbjct: 479 IYKMLDEICQQLKSAGY 495
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 18/148 (12%)
Query: 76 SVSGSLSYATNVFSHIK-RSDLYTYNIMI---RANACKSSETNDTHSGKCLKLYKQMLCT 131
S G L A VF +++ + L T+N M+ AN C SG+ L L+ +M T
Sbjct: 259 SKCGFLEGAVYVFDNVRGKRSLDTWNAMLAGFTANGC---------SGRALALFTRMETT 309
Query: 132 GISPDCLTFPFLLKECTKRLDGLV--GASVYGQVVK-FGVCDDVFVQNSVISLFMACGFV 188
G+ P+ +TF +L C+ GLV G + ++ + +G+ D+ ++ LF G
Sbjct: 310 GLMPNKITFNCILNACSH--GGLVEEGMRCFQRMSRVYGIEPDIAHYGCMVDLFCRAGMF 367
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRS 216
A + M S ++G R+
Sbjct: 368 EKAEEIIQIMPMEPDASMLKALLGACRT 395
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 188/548 (34%), Positives = 294/548 (53%), Gaps = 35/548 (6%)
Query: 11 SLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHS---LIT 67
S L + P N + + + + CK+ ++ I+ +II+ N HH ++
Sbjct: 15 SALPPNSGTKPKNTPNRRRHFISLLQNCKHNNQIPPIYAKIIR------NHHHQDPFVVF 68
Query: 68 RLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQ 127
LL C S S+ YA+ +FSH + ++Y Y +I T+ H LY Q
Sbjct: 69 ELLRVC--SNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIH------LYYQ 120
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
M+ + + PD +LK C L G V+ QV+K G+ + ++ +I L+ CG
Sbjct: 121 MINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGA 180
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
AR +FDEM RDVV+ MI Y G D W ++I G V+
Sbjct: 181 FEDARRVFDEMPERDVVASTVMINYYFDHGIKDTV-------------CWTAMIDGLVRN 227
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
G + ALE+F+ MQ E V P+++TI VLSAC+ LGA+ G+WV Y+ + ++ +
Sbjct: 228 GESNRALEVFRNMQ----REDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELN 283
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+G AL++MY +CG ++ A VF++M +K+ + + +MI FAL+G EA + FR +
Sbjct: 284 HFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIK 343
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
+G P+ VTFVG+L+AC+H GL E G F M Y +EP + HY CM+D+L R G
Sbjct: 344 QGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLE 403
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
EA IR M + PD + GALL C++HGN+EL E+VA+ L+ + Y+ L + Y+
Sbjct: 404 EAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYS 463
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
+G++ + + R M+E GI KE PGCSS+EV+ +HEF + KE++ L L+
Sbjct: 464 SSGKWKEAAEVRTNMREEGIEKE-PGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELN 522
Query: 548 KIMKNGGF 555
+I++ G+
Sbjct: 523 QILRLEGY 530
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 244/384 (63%), Gaps = 5/384 (1%)
Query: 172 VFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
VF ++I G V SA+ LFD M + +VS AM+ Y + G+LD A LF M++
Sbjct: 93 VFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEE 152
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
R+ WN +I G+ Q G EAL LF+ M ++ KP+++T+ SVLSAC LGA++
Sbjct: 153 RDGVCWNVMIDGYTQNGMPNEALVLFRRM----LKAKAKPNEVTVLSVLSACGQLGALES 208
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
G+WVH Y+ +G+ +V +GTALVDMY KCG +E A VF ++ KD +AW +MI +A+
Sbjct: 209 GRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAM 268
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
+G+ +EA F+ M G+ P ++TF+G+LSAC HSG V +G F M+ Y +EP +
Sbjct: 269 HGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIE 328
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
HY CM+++L RAG +A L+++M +EPD +WG LLG C++HG + LGEK+ + L+D
Sbjct: 329 HYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQ 388
Query: 472 DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGS 531
+ N Y+ L ++YA G +D V + R +MK+ G++KE PGCSS+EV+ VHEF G
Sbjct: 389 NLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKE-PGCSSIEVNNKVHEFLAGGL 447
Query: 532 PKVVKEELVLILNGLSKIMKNGGF 555
++E+ ++L ++ +K+ G+
Sbjct: 448 NHPKRKEIYMMLEEINGWLKSHGY 471
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 103/248 (41%), Gaps = 53/248 (21%)
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y G LD ++ LF R + ++F W +II G G A +LF M S+ +
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSL---- 127
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
TA++ Y K G ++ A +F
Sbjct: 128 ---------------------------------------TAMLTCYAKHGELDAARVLFD 148
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
M ++D + W MI + NG EA FR M +PN VT + +LSAC G +E
Sbjct: 149 GMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALES 208
Query: 393 GRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
GRW H Y+ ++ +V+ ++D+ S+ G +A RL+ + DV W ++
Sbjct: 209 GRWV-----HSYIENNGIQFNVHVGTALVDMYSKCGSLEDA-RLVFDKIDDKDVVAWNSM 262
Query: 449 LGGCQMHG 456
+ G MHG
Sbjct: 263 IVGYAMHG 270
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 43/292 (14%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
SL++ + G L A +F ++ D +N+MI T + + L
Sbjct: 123 SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMI------DGYTQNGMPNEALV 176
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
L+++ML P+ +T +L C + G V+ + G+ +V V +++ ++
Sbjct: 177 LFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYS 236
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
CG + AR++FD++ ++DVV+WN+MI+GY + G
Sbjct: 237 KCGSLEDARLVFDKIDDKDVVAWNSMIVGY--------------------------AMHG 270
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS- 302
F Q EAL+LF+ M + P IT +LSAC + G + G + ++
Sbjct: 271 FSQ-----EALQLFKSMCRMGLH----PTNITFIGILSACGHSGWVTEGWDIFNKMKDEY 321
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG 353
G++ + +V++ G+ G VE+AY + K M + D + W ++ L+G
Sbjct: 322 GIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 373
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 299/527 (56%), Gaps = 48/527 (9%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK 92
+ + C + +L ++HT IIK L ++ ++T+ F A S ++ YA ++ ++
Sbjct: 12 DILQACNTLPKLAQLHTHIIK---LGFQNNPLVLTK--FTSASSNLDAIPYAMSLVFSVE 66
Query: 93 RS---DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
+ D + ++ +IRA A S ++ + Y ML GISP+ FPF+LK C
Sbjct: 67 DARVYDAFLFSTIIRAYAESSQSKHNA-----IFYYNLMLGYGISPNKYAFPFVLKACAG 121
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
D +G +V+G +VKFG DD+FVQN+++ ++ C
Sbjct: 122 LRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCC------------------------ 157
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
SG ++ A LF M K + +W ++I G+ + G++ A+ LF++MQ + V
Sbjct: 158 ------SGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGV---- 207
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
PD +T+ SVLSAC LGA++ GKW+ Y+ + + V + ALVDM+ KCG V++A G
Sbjct: 208 CPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALG 267
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
+F+ M K+ ++WT++I A++G G EA F EM+A G+ P + F+GLLSAC+HSGL
Sbjct: 268 LFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGL 327
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
VE+GR F M + + P + HY CM+D+LSRAGL +EA + MP+EP+ +W L+
Sbjct: 328 VERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLI 387
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C++HG ++LGE +++ LI +P++ + YV L ++Y K ++ K R M ++GI+K
Sbjct: 388 SACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQK 447
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFG 556
VPG + +E+D +HEF + E++ ++N + + MK G+
Sbjct: 448 -VPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYA 493
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 180/478 (37%), Positives = 278/478 (58%), Gaps = 16/478 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A F + + ++N M A A K + L L+ QML GI+PD
Sbjct: 206 GDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK------EALNLFHQMLEEGITPDDT 259
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T+ + C+ D + S+ + + + + FV+ +++ + G + AR +FDE+
Sbjct: 260 TWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDEL 319
Query: 199 -SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
S R+ V+WN MI Y R G L +A +LF M KR++ SWNS+I G+ Q G + ++ELF
Sbjct: 320 GSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELF 379
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+EM S ++PD++TIASVLSAC ++GA+ WV +R + + +L+ M
Sbjct: 380 KEMISCMD---IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFM 436
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG V A+ +F+ M +D +++ +IS FA NG+GKEA ME EG+ P+HVT+
Sbjct: 437 YSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTY 496
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+G+L+AC+H+GL+ +G+ F ++ P V HYACM+D+L RAG EA+ LI+SMP
Sbjct: 497 IGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMP 551
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M+P V+G+LL ++H V LGE A L +L+P N YV L ++YA GR++DVK+
Sbjct: 552 MKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKR 611
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R +MK+ G++K V G S VE G VH+F++ +++ +L L + MK GF
Sbjct: 612 VREMMKKGGLKKSV-GMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGF 668
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 232/519 (44%), Gaps = 80/519 (15%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
N+R+L++ H ++ + + H+ ++ LL C + +Y ++F+ D Y
Sbjct: 13 NIRQLRQFHGHLVHNSL---HSHNYWVSLLLINCT-RLHAHPAYVDSIFTSSPSPDASVY 68
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
+ M++ + + + + L+K + P + +L+K L G G
Sbjct: 69 SCMLKYYSRMGAHN------QVVSLFKCTHSLNLRPQPFVYIYLIK-----LAGKSGNLF 117
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ V+K G DD F++N+++ ++ G V AR LF++M+ R + WN+MI G +SG+
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNE 177
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV-------------- 265
A+ LF M RNI +W S++TG+ + G A F EM SV
Sbjct: 178 TEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKE 237
Query: 266 -------------EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
EE + PD T +S+C+ +G + + + + + + T
Sbjct: 238 CPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKT 297
Query: 313 ALVDMYGKCGCVERAYGVFKE--------------------------------MPKKDTL 340
AL+DM+ K G +E A +F E MPK+D +
Sbjct: 298 ALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVV 357
Query: 341 AWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+W +MI+ +A NG + + F+EM ++P+ VT +LSAC H G ++ W +
Sbjct: 358 SWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDI 417
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+R ++ + + +I + S+ G ++A R+ ++M DV + L+ G +G+ +
Sbjct: 418 VREKN-IKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGHGK 475
Query: 460 LGEKVAQYLID--LDPLNHAFYVNLCDMYAKAGRFDDVK 496
K+ + + ++P +H Y+ + + AG ++ K
Sbjct: 476 EAIKLVLTMEEEGIEP-DHVTYIGVLTACSHAGLLNEGK 513
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 177/492 (35%), Positives = 281/492 (57%), Gaps = 21/492 (4%)
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDL---------YTYNIMIRANACKSSETNDTHSGKC 121
F ++ LS+ T + +++ +L T +++ NA S + +
Sbjct: 216 LFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEA 275
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKF----GVCDDVFVQNS 177
L+++++M GI D T+ +L C L G V+ +++ + + V N+
Sbjct: 276 LEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNA 335
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
+ +L+ CG V AR +F++M +D+VSWNA++ GY+ +G +D A F M +RN+ +W
Sbjct: 336 LATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTW 395
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
+I+G Q G E+L+LF M+S E P A + ACA+L A+ HG+ +H
Sbjct: 396 TVMISGLAQNGFGEESLKLFNRMKSEGFE----PCDYAFAGAIIACAWLAALMHGRQLHA 451
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
L R G D + G AL+ MY KCG VE A+ +F MP D+++W AMI+ +G+G +
Sbjct: 452 QLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQ 511
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
A + F M E + P+ +TF+ +LS C+H+GLVE+G F M +Y + P HYA MI
Sbjct: 512 ALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMI 571
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L RAG FSEA+ +I +MP+EP +W ALL GC++HGN++LG + A+ L +L P +
Sbjct: 572 DLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDG 631
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKE 537
YV L +MYA GR+DDV K R LM+++G++KE PGCS +EV+ VH F + +V
Sbjct: 632 TYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKE-PGCSWIEVENKVHVFLVD---DIVHP 687
Query: 538 ELVLILNGLSKI 549
E+ + N L ++
Sbjct: 688 EVQAVYNYLEEL 699
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 207/453 (45%), Gaps = 85/453 (18%)
Query: 65 LITRLLFFCALSVSGSLSYATNVF--SHIKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
++ R A S +G+ + A +F + + D YN MI S ND +
Sbjct: 81 IVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITG----YSHNNDGFGA--I 134
Query: 123 KLYKQMLCTGISPDCLTFPFLL----------KECTKRLDGLVGASVYGQVVKFGVCDDV 172
+L++ +L G PD TF +L K+C + ++ VVK G
Sbjct: 135 ELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQ---------IHCAVVKSGSGFVT 185
Query: 173 FVQNSVISLFMACG---------FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
V N+++S+F+ C + +AR LFDEM+ RD +SW MI GY+R+G+LD A
Sbjct: 186 SVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAAR 245
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
M ++ + +WN++I+G+V G EALE+F++M ++ D+ T SVLSAC
Sbjct: 246 QFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW----DEFTYTSVLSAC 301
Query: 284 AYLGAIDHGKWVHGYLRRS----GLDCDVVIGTALVDMYGKCGCVERAYGV--------- 330
A G HGK VH Y+ R+ LD + + AL +Y KCG V+ A V
Sbjct: 302 ANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDL 361
Query: 331 ----------------------FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
F+EMP+++ L WT MIS A NG+G+E+ F M++E
Sbjct: 362 VSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSE 421
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAG 424
G P F G + ACA + GR H LV + + +I + ++ G
Sbjct: 422 GFEPCDYAFAGAIIACAWLAALMHGR-----QLHAQLVRLGFDSSLSAGNALITMYAKCG 476
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+ A L +MP D W A++ HG+
Sbjct: 477 VVEAAHCLFLTMPY-LDSVSWNAMIAALGQHGH 508
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 175/404 (43%), Gaps = 64/404 (15%)
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+ +V+ ++ G ++ N +I ++ + SA LFDE+ D+V+ +I +
Sbjct: 33 IARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHS 92
Query: 215 RSGDLDVALDLF--RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+G+ ++A ++F + R+ +N++ITG+ A+ELF+++ + +PD
Sbjct: 93 SAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDL----LRNGFRPD 148
Query: 273 KITIASVLSACAYLGAID-HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG--------- 322
T SVL A A + + + +H + +SG + AL+ ++ KC
Sbjct: 149 NFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSS 208
Query: 323 CVERAYGVFKEMPKKDTLAWT-------------------------------AMISVFAL 351
+ A +F EM ++D L+WT AMIS +
Sbjct: 209 LMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVH 268
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV--EPH 409
+G+ EA + FR+M G++ + T+ +LSACA++G G+ H Y++ EP
Sbjct: 269 HGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGK-----QVHAYILRTEPR 323
Query: 410 ------VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEK 463
+ + + + G EA ++ MP++ D+ W A+L G G + ++
Sbjct: 324 PSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAILSGYVNAGRI---DE 379
Query: 464 VAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+ ++ N + + A+ G ++ K N MK G
Sbjct: 380 AKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGF 423
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/478 (37%), Positives = 278/478 (58%), Gaps = 16/478 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A F + + ++N M A A K + L L+ QML GI+PD
Sbjct: 206 GDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK------EALNLFHQMLEEGITPDDT 259
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T+ + C+ D + S+ + + + + FV+ +++ + G + AR +FDE+
Sbjct: 260 TWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDEL 319
Query: 199 -SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
S R+ V+WN MI Y R G L +A +LF M KR++ SWNS+I G+ Q G + ++ELF
Sbjct: 320 GSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELF 379
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+EM S ++PD++TIASVLSAC ++GA+ WV +R + + +L+ M
Sbjct: 380 KEMISCMD---IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFM 436
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG V A+ +F+ M +D +++ +IS FA NG+GKEA ME EG+ P+HVT+
Sbjct: 437 YSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTY 496
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+G+L+AC+H+GL+ +G+ F ++ P V HYACM+D+L RAG EA+ LI+SMP
Sbjct: 497 IGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMP 551
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M+P V+G+LL ++H V LGE A L +L+P N YV L ++YA GR++DVK+
Sbjct: 552 MKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKR 611
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R +MK+ G++K V G S VE G VH+F++ +++ +L L + MK GF
Sbjct: 612 VREMMKKGGLKKSV-GMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGF 668
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 232/519 (44%), Gaps = 80/519 (15%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
N+R+L++ H ++ + + H+ ++ LL C + +Y ++F+ D Y
Sbjct: 13 NIRQLRQFHGHLVHNSL---HSHNYWVSLLLINCT-RLHAHPAYVDSIFTSSPSPDASVY 68
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
+ M++ + + + + L+K + P + +L+K L G G
Sbjct: 69 SCMLKYYSRMGAHN------QVVSLFKCTHSLNLRPQPFVYIYLIK-----LAGKSGNMF 117
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ V+K G DD F++N+++ ++ G V AR LF++M+ R + WN+MI G +SG+
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNE 177
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV-------------- 265
A+ LF M RNI +W S++TG+ + G A F EM SV
Sbjct: 178 TEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKE 237
Query: 266 -------------EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
EE + PD T +S+C+ +G + + + + + + T
Sbjct: 238 CPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKT 297
Query: 313 ALVDMYGKCGCVERAYGVFKE--------------------------------MPKKDTL 340
AL+DM+ K G +E A +F E MPK+D +
Sbjct: 298 ALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVV 357
Query: 341 AWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+W +MI+ +A NG + + F+EM ++P+ VT +LSAC H G ++ W +
Sbjct: 358 SWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDI 417
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+R ++ + + +I + S+ G ++A R+ ++M DV + L+ G +G+ +
Sbjct: 418 VREKN-IKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGHGK 475
Query: 460 LGEKVAQYLID--LDPLNHAFYVNLCDMYAKAGRFDDVK 496
K+ + + ++P +H Y+ + + AG ++ K
Sbjct: 476 EAIKLVLTMEEEGIEP-DHVTYIGVLTACSHAGLLNEGK 513
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 183/487 (37%), Positives = 271/487 (55%), Gaps = 51/487 (10%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
S + LLF A++V G++++A VF I R D + YN +IR A ++ + +
Sbjct: 11 SELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRD------AVS 64
Query: 124 LYKQMLCTG----ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
LY +ML G + PD LTFPF+L+ CT G G V+ VVK G D FV+N++I
Sbjct: 65 LYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALI 124
Query: 180 SLFMACGF-------------------------------VTSARMLFDEMSNRDVVSWNA 208
+ +CG + +AR LFDE +D+VSWN
Sbjct: 125 GMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNV 184
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
MI Y + GD+ +A +LF ++ +R++ SWN +I+G+V+ G ALELF++MQ
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMG---- 240
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYL----RRSGLDCDVVIGTALVDMYGKCGCV 324
KPD +T+ S+LSACA G +D G+ +H L R+G VV+G AL+DMY KCG +
Sbjct: 241 EKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGF--PVVLGNALIDMYAKCGSM 298
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
+ A+ VF M KD W +++ AL+G+ E+ D F +M VRP+ +TFV +L AC
Sbjct: 299 KSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIAC 358
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+H G+V+KGR F +M+H Y VEP++ HY CM+D+L RAGL EA I +M EP+ +
Sbjct: 359 SHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVI 418
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
W LL C++HG +EL + + L+ YV L ++YA G + +K R LM +
Sbjct: 419 WRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDD 478
Query: 505 RGIRKEV 511
G+ KE
Sbjct: 479 SGVNKEA 485
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 268/442 (60%), Gaps = 18/442 (4%)
Query: 85 TNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLC-TGISPDCLTFPF 142
T VF + D ++NIMI CK E + + +Y++M + P+ T
Sbjct: 163 TQVFEEMPDRDAVSWNIMISGYVRCKRFE-------EAVDVYRRMWTESNEKPNEATVVS 215
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
L C + +G ++ + + + N+++ ++ CG V+ AR +FD M+ ++
Sbjct: 216 TLSACAVLRNLELGKEIHDYIAS-ELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKN 274
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
V W +M+ GY+ G LD A +LF R R+I W ++I G+VQ R E + LF EMQ
Sbjct: 275 VNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQI 334
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
V KPDK + ++L+ CA GA++ GKW+H Y+ + + D V+GTAL++MY KCG
Sbjct: 335 RGV----KPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCG 390
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
C+E+++ +F + +KDT +WT++I A+NG EA + F+ M+ G++P+ +TFV +LS
Sbjct: 391 CIEKSFEIFNGLKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLS 450
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD- 441
AC+H+GLVE+GR F M +Y +EP++ HY C ID+L RAGL EAE L++ +P + +
Sbjct: 451 ACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNE 510
Query: 442 --VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
V ++GALL C+ +GN+++GE++A L + + + + L +YA A R++DV+K R
Sbjct: 511 IIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVR 570
Query: 500 NLMKERGIRKEVPGCSSVEVDG 521
N MK+ GI+K VPG S++EVDG
Sbjct: 571 NKMKDLGIKK-VPGYSAIEVDG 591
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 210/457 (45%), Gaps = 85/457 (18%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ CK+M +LK+I I C+ + +L+ F S G +YA +F++I
Sbjct: 15 LKSCKSMSQLKQIQAHIF---CVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFNYIHDP 71
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
L+ YN+MI+A S + + L++Q+ G+ PD T+P++LK +
Sbjct: 72 SLFIYNLMIKAFVKSGSFRS------AISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVR 125
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G V+ VVK G+ D +V NS + ++ G V +F+EM +RD VSWN MI GY+
Sbjct: 126 EGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYV 185
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
R + A+D++RRM W E KP++
Sbjct: 186 RCKRFEEAVDVYRRM-------W---------------------------TESNEKPNEA 211
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV---------- 324
T+ S LSACA L ++ GK +H Y+ S LD ++G AL+DMY KCG V
Sbjct: 212 TVVSTLSACAVLRNLELGKEIHDYI-ASELDLTTIMGNALLDMYCKCGHVSVAREIFDAM 270
Query: 325 ---------------------ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
++A +F+ P +D + WTAMI+ + +E F
Sbjct: 271 TVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFG 330
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA----CMIDI 419
EM+ GV+P+ V LL+ CA SG +E+G+W H Y+ E + A +I++
Sbjct: 331 EMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWI-----HNYIDENRIKVDAVVGTALIEM 385
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
++ G ++ + + E D W +++ G M+G
Sbjct: 386 YAKCGCIEKSFEIFNGLK-EKDTTSWTSIICGLAMNG 421
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 19/299 (6%)
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
GD + A +F + ++F +N +I FV+ G R A+ LFQ+++ E V PD T
Sbjct: 56 GDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLR----EHGVWPDNYTY 111
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
VL +G + G+ VH ++ ++GL+ D + + +DMY + G VE VF+EMP
Sbjct: 112 PYVLKGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPD 171
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRW 395
+D ++W MIS + +EA D +R M E +PN T V LSACA +E G+
Sbjct: 172 RDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKE 231
Query: 396 CFVMMRHVYL---VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
H Y+ ++ ++D+ + G S A + +M ++ +V W +++ G
Sbjct: 232 I-----HDYIASELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVK-NVNCWTSMVTGY 285
Query: 453 QMHGNVELGEKVAQYLIDLDP-LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
+ G ++ A+ L + P + + + + Y + RF++ M+ RG++ +
Sbjct: 286 VICGQLDQ----ARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPD 340
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 200/564 (35%), Positives = 296/564 (52%), Gaps = 74/564 (13%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPC-LQTNDHHSLIT------------- 67
PN + +L++ + K E ++IH Q++K C L H SLI+
Sbjct: 81 PNAYTFPFLLKSCA-KSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARK 139
Query: 68 -------RLLFFCALSVSGSLSY-----ATNVFSHIKRSDLYTYNIMIRA--NACKSSET 113
R + C ++G S A VF I D+ ++N MI C E
Sbjct: 140 VFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEA 199
Query: 114 NDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF 173
L+L+K+M+ T + PD T +L C + +G ++ V DD
Sbjct: 200 --------LELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV------DDHH 245
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRN 233
GF +S +++ NA I Y + GD+++A LF + ++
Sbjct: 246 ------------GFGSSLKIV------------NAFIGLYSKCGDVEIASGLFEGLSCKD 281
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
+ SWN++I G+ +EAL LFQEM S P+ +T+ SVL ACA+LGAID G+
Sbjct: 282 VVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE----SPNDVTMLSVLPACAHLGAIDIGR 337
Query: 294 WVHGYL--RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
W+H Y+ R G+ + T+L+DMY KCG +E A+ VF M K +W AMI FA+
Sbjct: 338 WIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAM 397
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
+G AFD F M G+ P+ +T VGLLSAC+HSGL++ GR F + Y + P +
Sbjct: 398 HGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLE 457
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
HY CMID+L AGLF EAE +I MPMEPD +W +LL C+MHGN+EL E AQ L+++
Sbjct: 458 HYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEI 517
Query: 472 DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGS 531
+P N YV L ++YA AGR++DV + R ++ +G++K VPGCSS+E+D VVHEF +
Sbjct: 518 EPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKK-VPGCSSIEIDSVVHEFIIGDK 576
Query: 532 PKVVKEELVLILNGLSKIMKNGGF 555
E+ +L + +++ GF
Sbjct: 577 LHPQSREIYRMLEEMDVLLEEAGF 600
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 220/412 (53%), Gaps = 17/412 (4%)
Query: 48 HTQIIKSPCLQTNDHHSLITRLLFFCALSVS-GSLSYATNVFSHIKRSDLYTYNIMIRAN 106
H Q++K+ TN +++LL C +S L YA +VF + +L +N M+R
Sbjct: 2 HAQMVKTGLHNTN---YALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGL 58
Query: 107 ACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKF 166
A S + L++Y +M+ G P+ TFPFLLK C K G ++ QV+K
Sbjct: 59 ASSSDLVSP------LEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKL 112
Query: 167 GVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLF 226
G D + S+IS++ G + AR +FD S RDVVS A+I GY GD+ A +F
Sbjct: 113 GCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVF 172
Query: 227 RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
+ +R++ SWN++ITG+V+ EALELF+EM ++ V+PD+ T+ SVLSACA
Sbjct: 173 DXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTN----VRPDEGTLVSVLSACAQS 228
Query: 287 GAIDHGKWVHGYL-RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAM 345
G+I+ G+ +H + G + I A + +Y KCG VE A G+F+ + KD ++W +
Sbjct: 229 GSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTL 288
Query: 346 ISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-RHVY 404
I + KEA F+EM G PN VT + +L ACAH G ++ GRW V + + +
Sbjct: 289 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLK 348
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
V +ID+ ++ G A ++ SM M + W A++ G MHG
Sbjct: 349 GVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFAMHG 399
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
L A+ +F ++ N+ WN+++ G LE++ M S P+ T
Sbjct: 33 LPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGH----VPNAYTFPF 88
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+L +CA + G+ +H + + G + D T+L+ MY + G +E A VF ++D
Sbjct: 89 LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++ TA+I+ +A G + A F + V + G + C + +E
Sbjct: 149 VVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALE------- 201
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
LF E R + PD ++L C G++
Sbjct: 202 --------------------------LFKEMMR----TNVRPDEGTLVSVLSACAQSGSI 231
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNL------CDMYAKAG 490
ELG ++ + D +H F +L +Y+K G
Sbjct: 232 ELGREIHTLVDD----HHGFGSSLKIVNAFIGLYSKCG 265
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 278/514 (54%), Gaps = 41/514 (7%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C+++R++K++H ++ L S + L+F ++ V G ++A VF I D +
Sbjct: 18 CRSLRQIKQVHALMVLRGFLSDP---SALRELIFASSVGVRGGTAHARLVFDRIPHPDRF 74
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
YN +IR A + + + + G+ PD TFPF+L+ C GA
Sbjct: 75 MYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGA 134
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGF------------------------------ 187
V+ VVK G D FV+N++I + CG
Sbjct: 135 QVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISGFARRG 194
Query: 188 -VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
+ +AR LFDE +D+VSWN MI Y + GD+ A +LF R++ SWN++I+G+V+
Sbjct: 195 DIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVR 254
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL--RRSGL 304
G ++A+ELF++MQ+ KPD +T+ S+LSACA G +D G+ +H +L R S +
Sbjct: 255 CGSHKQAMELFEQMQAMGE----KPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFSRI 310
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
V+G AL+DMY KCG + A VF M K+ W ++I AL+G+ EA D F++
Sbjct: 311 GPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQK 370
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
M V+P+ +TFV +L AC+H G+V+KG F +M+ Y++EP+V HY CM+D+LSRAG
Sbjct: 371 MLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDMLSRAG 430
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
L EA I +M +EP+ +W LLG C++HG +EL E Q L+ +V L +
Sbjct: 431 LLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKARSDASGDFVLLSN 490
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
+YA G + + R LM + G+ KE GC+ V+
Sbjct: 491 IYASVGEWLGSENMRKLMDDSGVNKEA-GCAVVD 523
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 286/533 (53%), Gaps = 23/533 (4%)
Query: 21 PPNKESTKLILRNAIDECKNMRELK--EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
P ST L L ++ + L IH ++K+ L H L T LL A +
Sbjct: 3 PLTLSSTALRLIKSLSPAVHGAHLSASSIHCLLLKAGLLHVGAH--LPTALL--SAYAAL 58
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS +A +F + L M RA+ + + + ++ M+ G+ PD +
Sbjct: 59 GSPDHARRLFDEMPEQGLVPRTAMARAHVASG------QAAQAIAVFGDMVADGVFPDNV 112
Query: 139 TFPFLLKEC------TKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
L C T R + G ++ VV G+ DVFV +I ++ G + +R
Sbjct: 113 AVAVALGACHGAGSWTARRN--PGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSR 170
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+FD+M +R ++WNAM+ Y R G +D A ++F M +R++ SWN+++ G+ GR RE
Sbjct: 171 RVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCRE 230
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
AL LF++M S S V P+ T++++L ACA G ++ G WVH Y+ R+ ++ D +
Sbjct: 231 ALGLFRQMVSPS-SCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDR 289
Query: 313 ALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
L+DMY KCG ++ A VF++ P KKD +WT +I A++G +A F M+ G+
Sbjct: 290 CLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQDNGIC 349
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ VT VG+L+ACAH GLV++G F M + + P + HY CMID+L R G EA
Sbjct: 350 PDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYS 409
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
+IR+MPM+P+ +WGA L C++HGN+ELG+ A+ L LDP + V L MYAKA
Sbjct: 410 MIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQD 469
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
+ + + R M ++K PGCSS+E+ G VHEF GS E+ +L
Sbjct: 470 WIGLARERREMNSMQVKK-TPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQ 521
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/456 (36%), Positives = 263/456 (57%), Gaps = 42/456 (9%)
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
N MIR C + HS + +Y QM GI PD TFP +LK + +G ++
Sbjct: 111 NSMIR---CYTDSNKHLHS---VFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAI 164
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ +++ G +V+V ++++++ C V+ AR +FDE+ +R
Sbjct: 165 HCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDR------------------ 206
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
NI SWN++ITG+ R+ +++F+EMQ + KP ++T+ V
Sbjct: 207 -------------NIVSWNALITGYNHNRMFRKVIDVFREMQIAGA----KPVEVTMVGV 249
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
L ACA+LGA++ G+W+ Y+ + L +V +GTAL+DMY KCG V+ A +FK M K+
Sbjct: 250 LLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNV 309
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
W +IS +A+NG G+ A F M E +P+ VTF+G+L AC H GLV +GR F
Sbjct: 310 YTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTS 369
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M+ + + P + HY CM+D+L RAG EA++LI++M M+PD +W LLG C++HGN++
Sbjct: 370 MKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQ 429
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LGE + L++L+P N YV L ++YA+ R+D V + R +M R +RK VPGCSS+E+
Sbjct: 430 LGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRK-VPGCSSIEI 488
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
D VV+EF + K EE+ +L ++K +K G+
Sbjct: 489 DNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGY 524
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 201/589 (34%), Positives = 303/589 (51%), Gaps = 81/589 (13%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
ID + +LK+IH +++ L LIT+L+ A S G +++A VF + R
Sbjct: 28 IDSATHKAQLKQIHARLL---VLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRP 82
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
++ +N +IR + + H L +Y M +SPD TFP LLK C+
Sbjct: 83 QIFPWNAIIRGY------SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD--EMSNRDVVSWNAMIIG 212
+G V+ QV + G DVFVQN +I+L+ C + SAR +F+ + R +VSW A++
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 213 YLRSGDLDVALDLFRRMKKRNIF-SWNSII------------------------------ 241
Y ++G+ AL++F M+K ++ W +++
Sbjct: 197 YAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 242 --------TGFVQGGRAREALELFQEMQSSSV-----------------------EEM-- 268
T + + G+ A LF +M+S ++ EM
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 269 --VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
V+PD I+I S +SACA +G+++ + ++ Y+ RS DV I +AL+DM+ KCG VE
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A VF +D + W+AMI + L+G +EA +R ME GV PN VTF+GLL AC H
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
SG+V +G W F +M + + P HYAC+ID+L RAG +A +I+ MP++P V VWG
Sbjct: 437 SGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALL C+ H +VELGE AQ L +DP N YV L ++YA A +D V + R MKE+G
Sbjct: 496 ALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 555
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ K+V GCS VEV G + F + EE+ + + +K GGF
Sbjct: 556 LNKDV-GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGF 603
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 307/559 (54%), Gaps = 84/559 (15%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+++CK M ELK +H +I + +Q ++RL+ FCA S SG+L+YA +VF+ I R
Sbjct: 12 LEKCKTMAELKRLHGLMITTSVIQDV---IPLSRLVDFCAYSDSGNLNYAKSVFNQIDRP 68
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
LY +N MI+ + SE+ D + L +Y++M G +PD TFPF+LK C+
Sbjct: 69 SLYIWNSMIKGYSI--SESPD----EALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYN 122
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G V+ +VK G DV+ +++ ++ ACG + +A +FD++ +VV+W ++I G +
Sbjct: 123 LGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCI 182
Query: 215 -----------------------------------RSGDLD-----------VALDLFRR 228
RS DL+ + LD F+
Sbjct: 183 SNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQS 242
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEM----------------QSSSVEEMV--- 269
N+ +I+ + + G + A +LF +M Q E +
Sbjct: 243 NSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLF 302
Query: 270 --------KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
PDK T V+ ACA+LGA+ G+ +H Y+ ++ L D IGTALVDMY K
Sbjct: 303 SDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKS 362
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGL 380
G ERA VF E+ KKD AWT++I A++G+G+EA F++M+ + + P+ +T++G+
Sbjct: 363 GDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGV 422
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
LSAC+H G VE G+ F+ M++V+ +EP HY CM+D+LSRAG EAERL+ MP+EP
Sbjct: 423 LSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEP 482
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
+ +W ALL GC+++ N+++ ++V + + +L+ YV L ++YA A R+++VK R
Sbjct: 483 NTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARE 542
Query: 501 LMKERGIRKEVPGCSSVEV 519
LMKER I+K + G SSVE+
Sbjct: 543 LMKERKIQKSL-GHSSVEM 560
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 148/294 (50%), Gaps = 19/294 (6%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSN----RDVVSWNAMI--IGYLRSGDLDVALDLFRRM 229
NS++SL C + + L M +DV+ + ++ Y SG+L+ A +F ++
Sbjct: 6 NSILSLLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQI 65
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
+ +++ WNS+I G+ EAL +++EM+ ++ PD T VL AC+ +
Sbjct: 66 DRPSLYIWNSMIKGYSISESPDEALTMYREMR----QKGYAPDHFTFPFVLKACSLVNGY 121
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
+ G+ VH + ++G + DV TAL+ MY CG +E A VF ++PK + +AWT++I+
Sbjct: 122 NLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGC 181
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP- 408
N EA +++ME V PN +T V +L ACA S + GRW + L +P
Sbjct: 182 ISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGL-DPF 240
Query: 409 ------HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+V ++D+ ++ G A L MP ++ W +++G +G
Sbjct: 241 QSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHR-NLVAWNSMIGAYNQYG 293
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 286/533 (53%), Gaps = 23/533 (4%)
Query: 21 PPNKESTKLILRNAIDECKNMRELK--EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
P ST L L ++ + L IH ++K+ L H L T LL A +
Sbjct: 3 PLTLSSTALRLIKSLSPAVHGAHLSASSIHCLLLKAGLLHVGAH--LPTALL--SAYAAL 58
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS +A +F + L M RA+ + + + ++ M+ G+ PD +
Sbjct: 59 GSPDHARRLFDEMPEQGLVPRTAMARAHVASG------QAAQAIAVFGDMVADGVFPDNV 112
Query: 139 TFPFLLKEC------TKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
L C T R + G ++ VV G+ DVFV +I ++ G + +R
Sbjct: 113 AVAVALGACHGAGSWTARRN--PGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSR 170
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+FD+M +R ++WNAM+ Y R G +D A ++F M +R++ SWN+++ G+ GR RE
Sbjct: 171 RVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCRE 230
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
AL LF++M S S V P+ T++++L ACA G ++ G WVH Y+ R+ ++ D +
Sbjct: 231 ALGLFRQMVSPS-SCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDR 289
Query: 313 ALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
L+DMY KCG ++ A VF++ P KKD +WT +I A++G +A F M+ G+
Sbjct: 290 CLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQDNGIC 349
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ VT VG+L+ACAH GLV++G F M + + P + HY CMID+L R G EA
Sbjct: 350 PDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRIGRLQEAYS 409
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
+IR+MPM+P+ +WGA L C++HGN+ELG+ A+ L LDP + V L MYAKA
Sbjct: 410 MIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQD 469
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
+ + + R M ++K PGCSS+E+ G VHEF GS E+ +L
Sbjct: 470 WIGLARERREMNSMQVKK-TPGCSSIELKGEVHEFVAGGSQHPQYAEICSVLQ 521
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 286/516 (55%), Gaps = 32/516 (6%)
Query: 63 HSLITRLLFFCA-----------LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSS 111
H L ++ FF A + G + A +F + D+ T+NIMI
Sbjct: 138 HGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMI------DG 191
Query: 112 ETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDD 171
+ + H LKLY++M +G PD + +L C G YG+ + + D+
Sbjct: 192 YSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAH-----AGNLSYGKAIHQFIKDN 246
Query: 172 VF-----VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLF 226
F +Q S+++++ CG + AR ++D++ ++ +V AM+ GY + G + A +F
Sbjct: 247 GFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIF 306
Query: 227 RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
RM ++++ W+++I+G+ + + EAL+LF EMQ + PD+IT+ SV+SACA +
Sbjct: 307 DRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQ----RRRIVPDQITMLSVISACANV 362
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
GA+ KW+H Y ++G + I AL+DMY KCG + +A VF+ MP+K+ ++W++MI
Sbjct: 363 GALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMI 422
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
+ FA++G A F M+ + + PN VTF+G+L AC+H+GLVE+G+ F M + + +
Sbjct: 423 NAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRI 482
Query: 407 EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
P HY CM+D+ RA +A LI +MP P+V +WG+L+ CQ HG +ELGE A
Sbjct: 483 SPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAAT 542
Query: 467 YLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
L++L+P + V L ++YAK R+DDV R LMK +G+ KE CS +EV+ VH F
Sbjct: 543 RLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKE-KACSRIEVNNEVHVF 601
Query: 527 SMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGL 562
M +E+ L+ + +K G+ G+
Sbjct: 602 MMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGI 637
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 217/470 (46%), Gaps = 79/470 (16%)
Query: 26 STKLIL----RNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
ST+LI + + CK +R +K+IH QI++S +N + +L
Sbjct: 6 STRLIPSPSEKGLLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSAL 65
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
YA ++FSHI N ++R + + N L LY + G D +FP
Sbjct: 66 DYALSLFSHIPNPPTRFSNQLLRQFSRGPTPEN------TLSLYLHLRRNGFPLDRFSFP 119
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCD-DVFVQNSVISLFMACGFVTSARMLFDEMSN 200
LLK +K +G ++G KFG D F+Q+++I+++ ACG + AR LFD+MS+
Sbjct: 120 PLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSH 179
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
RDVV+WN MI GY ++ D L+L++EM
Sbjct: 180 RDVVTWNIMIDGYSQNAHYD-------------------------------HVLKLYEEM 208
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
++S E PD I + +VLSACA+ G + +GK +H +++ +G I T+LV+MY
Sbjct: 209 KTSGTE----PDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYAN 264
Query: 321 CGCVERAYGVFKEMP-------------------------------KKDTLAWTAMISVF 349
CG + A V+ ++P +KD + W+AMIS +
Sbjct: 265 CGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGY 324
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A + EA F EM+ + P+ +T + ++SACA+ G + + +W
Sbjct: 325 AESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTL 384
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ A +ID+ ++ G +A + +MP + +V W +++ MHG+ +
Sbjct: 385 PINNA-LIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGDAD 432
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 293/519 (56%), Gaps = 51/519 (9%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
CKN+R LK+IH ++ + + + S++ L++ +LSV G+L YA +F I + D+
Sbjct: 22 CKNIRTLKQIHASMVVNGLMS---NLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVS 78
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
N ++R +A K + LY +M G+SPD TF F+LK C+K G
Sbjct: 79 ICNHVLRGSA------QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGF 132
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACG--------FVTSARM---------------- 193
+ +G+VV+ G + +V+N++I CG F SA+
Sbjct: 133 AFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRG 192
Query: 194 -------LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
LFDEM +D V+WN MI G L+ ++D A +LF R ++++ +WN++I+G+V
Sbjct: 193 KIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVN 252
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY-LRRSGLD 305
G +EAL +F+EM+ + PD +TI S+LSACA LG ++ GK +H Y L + +
Sbjct: 253 CGYPKEALGIFKEMRDAGEH----PDVVTILSLLSACAVLGDLETGKRLHIYILETASVS 308
Query: 306 CDVVIGT----ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
+ +GT AL+DMY KCG ++RA VF+ + +D W +I AL+ + + + +
Sbjct: 309 SSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEM 367
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F EM+ V PN VTF+G++ AC+HSG V++GR F +MR +Y +EP++ HY CM+D+L
Sbjct: 368 FEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLG 427
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAG EA + SM +EP+ VW LLG C+++GNVELG+ + L+ + YV
Sbjct: 428 RAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVL 487
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
L ++YA G++D V+K R + + ++K G S +E D
Sbjct: 488 LSNIYASTGQWDGVQKVRKMFDDTRVKKPT-GVSLIEED 525
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/472 (36%), Positives = 270/472 (57%), Gaps = 42/472 (8%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A+ VF I + +N+MIR A D L+LY +M+ G+ PD FPF
Sbjct: 771 ASIVFEDIPNPCSFLWNVMIRGFA------TDGRFLSSLELYSKMMEKGLKPDKFAFPFA 824
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
LK C D G ++ +V G +D+FV +++ ++ CG + +AR+
Sbjct: 825 LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARL---------- 874
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
+F +M R++ SW S+I+G+ G E L F M+SS
Sbjct: 875 ---------------------VFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSS 913
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
V P++++I SVL AC LGA+ G+W H Y+ ++G + D+++ TA++DMY KCG
Sbjct: 914 GV----IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGS 969
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
++ A +F E KD + W+AMI+ + ++G+G++A D F +M GVRP+HVTF +LSA
Sbjct: 970 LDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSA 1029
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+HSGL+E+G+ F +M +++ + +YACM+D+L RAG SEA LI +MP+EPD
Sbjct: 1030 CSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDAS 1089
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+WG+LLG C++H N++L EK+A +L LDP++ ++V L ++YA R+++V+K R +M
Sbjct: 1090 IWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMA 1149
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
RG K + G S VE D VH+F + E+L L L+ MK+ G+
Sbjct: 1150 RRGANK-IQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGY 1200
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 147/450 (32%), Positives = 247/450 (54%), Gaps = 43/450 (9%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G A N+FS + D+ +++ MI AC + N+ + + L L+ +M+ P+
Sbjct: 254 TGCEKIAANLFSKMPEKDVISWSTMI---ACYA---NNEAANEALNLFHEMIEKRFEPNS 307
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T L+ C + G ++ V G D V ++I ++M C
Sbjct: 308 VTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCP--------- 358
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
D A+DLF+R+ K+++ SW ++++G+ Q G A +++ +F
Sbjct: 359 ----------------------DEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVF 396
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+ M S ++ PD + + +L+A + LG +HGY+ RSG + +V +G +L+++
Sbjct: 397 RNMLSDGIQ----PDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIEL 452
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVT 376
Y KCG + A +FK M +D + W++MI+ + ++G G EA + F +M + VRPN+VT
Sbjct: 453 YSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVT 512
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
F+ +LSAC+H+GLVE+G F M H Y + P H+ M+D+L R G +A +I M
Sbjct: 513 FLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRM 572
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
P+ VWGALLG C++H N+E+GE A+ L LDP + +Y+ L ++YA G++D+V
Sbjct: 573 PIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVA 632
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ R +KERG++K + G S VEV G VH F
Sbjct: 633 ELRTRIKERGLKK-MFGQSMVEVRGGVHSF 661
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 227/503 (45%), Gaps = 90/503 (17%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATN 86
++ +L + C N R + ++H+Q+ K+ L + + L CA SL A
Sbjct: 3 SRQVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCA-----SLQAARK 57
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT-GISPDCLTFPFLLK 145
VF +++ +N +R+ C+ + +T L+L+ M+CT G +PD T P LK
Sbjct: 58 VFDETPHPNVHLWNSTLRS-YCREKQWEET-----LRLFHLMICTAGEAPDNFTIPIALK 111
Query: 146 ECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
C +G ++G K + D+FV ++++ L+ CG + A +F+E D V
Sbjct: 112 ACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTV 171
Query: 205 SWNAMIIGYLRSGDLDVALDLF-------------------------------------- 226
W +M+ GY ++ D + AL LF
Sbjct: 172 LWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGL 231
Query: 227 --RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV------------------- 265
RR ++ NS++ + + G + A LF +M V
Sbjct: 232 VIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEA 291
Query: 266 --------EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
E+ +P+ +T+ S L ACA ++ GK +H G + D + TAL+DM
Sbjct: 292 LNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDM 351
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KC C + A +F+ +PKKD ++W A++S +A NG ++ FR M ++G++P+ V
Sbjct: 352 YMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAV 411
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVE----PHVYHYACMIDILSRAGLFSEAERLI 433
V +L+A + G+ ++ + H Y+V +V+ A +I++ S+ G +A +L
Sbjct: 412 VKILAASSELGIFQQA-----LCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLF 466
Query: 434 RSMPMEPDVFVWGALLGGCQMHG 456
+ M + DV +W +++ +HG
Sbjct: 467 KGMIVR-DVVIWSSMIAAYGIHG 488
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 127/251 (50%), Gaps = 14/251 (5%)
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
I Y+ +D A +F + F WN +I GF GR +LEL+ +M +E+ +K
Sbjct: 760 IMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKM----MEKGLK 815
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PDK L +CA L + GK +H +L G D+ + ALVDMY KCG +E A V
Sbjct: 816 PDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLV 875
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F +M +D ++WT+MIS +A NGY E F M + GV PN V+ + +L AC + G +
Sbjct: 876 FDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGAL 935
Query: 391 EKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
KG W H Y++ E + ++D+ S+ G A R + D+ W
Sbjct: 936 RKGEWF-----HSYVIQTGFEFDILVATAIMDMYSKCGSLDLA-RCLFDETAGKDLVCWS 989
Query: 447 ALLGGCQMHGN 457
A++ +HG+
Sbjct: 990 AMIASYGIHGH 1000
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
K H + GL D I T MY ++ A VF+++P + W MI FA +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV----EP 408
G + + + +M +G++P+ F L +CA +++G+ + H +LV
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGK-----VIHQHLVCCGCSN 851
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
++ A ++D+ ++ G EA RL+ D+ W +++ G +G
Sbjct: 852 DLFVDAALVDMYAKCGDI-EAARLVFDKMAVRDLVSWTSMISGYAHNG 898
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/478 (35%), Positives = 277/478 (57%), Gaps = 37/478 (7%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS++ A VFS + +L T+N +I + + + + L+++ +M+ +G+ PD +
Sbjct: 196 GSVACAEEVFSGMIERNLVTWNSLI------TCYEQNGPASEALEVFVRMMDSGLEPDEV 249
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T ++ C G ++ +VVK DD+ + N+++ ++ C V AR +FD
Sbjct: 250 TLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDR 309
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
MS R+VVS +M+ GY R+ + A +F +M +RN+ SWN++I G+ Q G EAL LF
Sbjct: 310 MSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLF 369
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+ ++ S+ W Y + L D+ +G +L+DM
Sbjct: 370 RLLKRESI----------------------------WPTHYTFGNLLKSDIFVGNSLIDM 401
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG +E VF++M ++D ++W A+I +A NGYG EA FR+M G +P+HVT
Sbjct: 402 YMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTM 461
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+G+L AC+H+GLVE+GR F M L+ P HY CM+D+L RAG +EA+ LI +MP
Sbjct: 462 IGVLCACSHAGLVEEGRHYFFSMEEHGLI-PLKDHYTCMVDLLGRAGCLNEAKNLIEAMP 520
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+ PD VWG+LL C++HGN+E+G+ A+ L+++DP N YV L +MYA+ GR+ DV +
Sbjct: 521 VNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVR 580
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R LM+++G+ K+ PGCS +EV+ VH F +K ++++ +L L++ MK G+
Sbjct: 581 VRKLMRQQGVTKQ-PGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGY 637
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 197/413 (47%), Gaps = 46/413 (11%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
P+ F LL C + V+ +++ ++F+QN +I ++ C + AR L
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD M R+ +WN++I +SG LD A LF M + + SWNS+++GF Q R E+L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
E F +M E ++ + S LSACA L ++ G VH + +S DV +G+AL
Sbjct: 133 EYFVKMH----REDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSAL 188
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+DMY KCG V A VF M +++ + W ++I+ + NG EA + F M G+ P+
Sbjct: 189 IDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDE 248
Query: 375 VTFVGLLSACA-----------HSGLVEKGRWCFVMMRHVYLVEPH-----------VYH 412
VT ++SACA H+ +V+ ++ ++ LV+ + V+
Sbjct: 249 VTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFD 308
Query: 413 YACMIDILSRAGLFS--------EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
+ +++S + S +A R + S + +V W AL+ G +G E ++
Sbjct: 309 RMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRL 368
Query: 465 AQYLI--DLDPLNHAF--------YV--NLCDMYAKAGRFDDVKKTRNLMKER 505
+ L + P ++ F +V +L DMY K G +D + MKER
Sbjct: 369 FRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKER 421
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
V ++ P+ A +L +C + + VH + + ++ I L+D+YGKC C+
Sbjct: 7 VRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCL 66
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
+ A +F MP+++T W ++ISV +G+ EA F M P+ ++ ++S
Sbjct: 67 DDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVSGF 122
Query: 385 AHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLF-----SEAERLIRSMPM 438
A E+ FV M R +L+ + + A + + AGL ++ L+
Sbjct: 123 AQHDRFEESLEYFVKMHREDFLLNEYSFGSA----LSACAGLMDLNMGTQVHALVSKSRY 178
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
DV++ AL+ G+V E+V +I+
Sbjct: 179 STDVYMGSALIDMYSKCGSVACAEEVFSGMIE 210
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/520 (36%), Positives = 298/520 (57%), Gaps = 57/520 (10%)
Query: 23 NKESTKLILRNAIDECK-NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
+K S K IL +C ++ LK+ H I+++ LQ D + + + + +S + L
Sbjct: 49 SKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQ--DSYIAGSLVKSYANVSTNRYL 106
Query: 82 SYATN--VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
S+ ++ VF +++ +++ +N MI+ E N+ K + LY +M+ P+ T
Sbjct: 107 SFESSLRVFDFVRKPNVFLWNCMIKV----CIENNEPF--KAILLYYEMMVAHFRPNKYT 160
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
+P +LK C+ G V+ +VK G+ D + +S I ++ + G + AR + D+
Sbjct: 161 YPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDD-- 218
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+ G++D R+ G EALE+F +
Sbjct: 219 ---------------KGGEVDAVCMPDRK-------------------GCFMEALEIFHQ 244
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
MQ +E ++P K + SVLSACA LGA+D G+W+H Y +R+ + D V+GT+LVDMY
Sbjct: 245 MQ----KEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYA 300
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG ++ A+ VF++M K+ +W AMI A++G ++A D F +M+ + PN +TFVG
Sbjct: 301 KCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVG 357
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+L+ACAH GLV+KG F MR Y VEP + HY C++D+L RAGL +EAE+++ S+P E
Sbjct: 358 VLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTE 417
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
P VWGALLG C+ HGNVELGE+V + L++L+P N Y L ++YAKAGR+++V + R
Sbjct: 418 PTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVR 477
Query: 500 NLMKERGIRKEVPGCSSVEVD-GVVHEFSM-KGSPKVVKE 537
LMKERGI K PG S +++ G VH+F + GS VK+
Sbjct: 478 KLMKERGI-KTTPGTSIIDLGRGEVHKFIIGDGSHPQVKD 516
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/534 (35%), Positives = 288/534 (53%), Gaps = 41/534 (7%)
Query: 44 LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMI 103
L+ +H ++ S L + H + F +L+ S LSYA V + + L +N I
Sbjct: 22 LRALHAHLVVSGRLASPSHLAA-----FLASLASSNHLSYARLVLPQ-RPATLLAHNAFI 75
Query: 104 RANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK-----------------E 146
RA A CL + + PD + FL++ E
Sbjct: 76 RALARGPR--------PCLA-FAAFRDLPLPPDHYSLNFLVRAATALVASAAEEKHVSAE 126
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
RL + S +G V++G D VQ+ V+S++ A G V S+R F E++ DVV
Sbjct: 127 VNARLQAV---SAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVVCV 183
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
AM+ GD+D A DLF M +R+ +W+++I G++ GR+REAL LF EM S+
Sbjct: 184 TAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGT- 242
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+ T+ SVL+ACA +G +D GKWVH Y+R G+ + +GTALVDMY KCG V
Sbjct: 243 ---TVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVT 299
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A VF+ M +++ WT+ +S A+NG G E F+ ME G++PN V+FV +L C+
Sbjct: 300 AMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSM 359
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+GLV++GR CF M Y V+P HY CM+D+ RAG +A I MPMEP VWG
Sbjct: 360 AGLVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWG 418
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALL ++H +V+LG+ L+ ++ N A +V L ++YA++ + V + R +MK +G
Sbjct: 419 ALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKG 478
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIR 560
++K VPG S++EVDG VHEF + G E+ L+L + + ++ G+ R
Sbjct: 479 VKK-VPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTR 531
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 187/515 (36%), Positives = 288/515 (55%), Gaps = 48/515 (9%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M + +H IIKS + ND SL T LL C + SLSYA VFS I D YN
Sbjct: 1 MNNVYRLHCYIIKSS--KQNDPLSLRT-LLLSCVAAAPESLSYARYVFSRIPSPDTIAYN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+IR++ S +HS L + M GI D TFPF+LK C+ RL + ++
Sbjct: 58 TIIRSH----SRFFPSHS---LFYFFSMRSNGIPLDNFTFPFVLKACS-RLQ--INLHLH 107
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+VK+G+ D+FVQN++I ++ CG L+
Sbjct: 108 SLIVKYGLDSDIFVQNALICVYGYCG-------------------------------SLE 136
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
+A+ +F M +R+ SW+++I F+ G A EAL+LF++MQ +E+ V PD++T+ SV+
Sbjct: 137 MAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQ---LEDKVVPDEVTMLSVI 193
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SA ++LG ++ G+WV ++ R GL V +GTAL+DM+ +CG ++ + VF++M ++ L
Sbjct: 194 SAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVL 253
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
WTA+I+ ++G EA F M GV+P++VTF G+L AC+H GLV++G F +
Sbjct: 254 TWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESI 313
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
R VY ++P + HY CM+DIL RAGL +EA + MPM+P+ +W LLG C H N+ L
Sbjct: 314 RKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGL 373
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
EKV + + + V L ++Y AGR+ + R+ M+E+ I KE PGCSS+ VD
Sbjct: 374 AEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKE-PGCSSINVD 432
Query: 521 GVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+HEF + E++ L+ + ++N G+
Sbjct: 433 QTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGY 467
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 302/540 (55%), Gaps = 32/540 (5%)
Query: 33 NAIDECKNMRELK---EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
+A+ C +++LK +IH+ + +S L S + + C G + YA +VF
Sbjct: 156 SALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKC-----GRVEYAQSVFD 210
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
+ ++N +I + + + LK++ +M+ G+ PD +T ++ C
Sbjct: 211 EMTVRSRVSWNSLI------TCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACAT 264
Query: 150 RLDGLVGASVYGQVVKFGVCD----DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
G ++ +VVK CD D+ + N+++ ++ C + AR++FD M R VVS
Sbjct: 265 ISAIKEGQQIHARVVK---CDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVS 321
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
+M+ GY ++ + VA +F M +++ +WN++I G Q G EAL LF+ ++
Sbjct: 322 ETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLK---- 377
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL------DCDVVIGTALVDMYG 319
E V P T ++L+ACA L + G+ H ++ + G D DV +G +L+DMY
Sbjct: 378 RESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYM 437
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG VE VF+ M +KD ++W AMI +A NG+G +A + F +M G P+HVT +G
Sbjct: 438 KCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIG 497
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+L AC+H+GL+++GR+ F M + + P HY CM+D+L RAG EA+ LI M M+
Sbjct: 498 VLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQ 557
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
PD VWG+LL C++H N++LGE V + L+++DP N YV L +MYA+ + +V + R
Sbjct: 558 PDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVR 617
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYI 559
LM++RG+ K+ PGCS +E+ G ++ F +K K+E+ ++L + + MK G+ Y+
Sbjct: 618 KLMRQRGVVKQ-PGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVPYV 676
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 169/354 (47%), Gaps = 34/354 (9%)
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D F LL +C + + V+ ++K + F+QN +I ++ CG V AR LF
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D M R++ SWN++I + +SG LD A+ +F +M + + SWNS+I+GF Q GR EAL
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
F +M ++ + S LSACA L + G +H + RS DV +G+ALV
Sbjct: 138 YFAQMHGHG----FLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALV 193
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DMY KCG VE A VF EM + ++W ++I+ + NG EA F EM GV P+ V
Sbjct: 194 DMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEV 253
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
T ++SACA +++G+ + + ++D+ ++ +EA +
Sbjct: 254 TLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDM 313
Query: 436 MP------------------------------MEPDVFVWGALLGGCQMHGNVE 459
MP M DV W AL+ GC +G E
Sbjct: 314 MPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENE 367
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 204/489 (41%), Gaps = 105/489 (21%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSP-----------------CLQTNDHHSLITRLL--- 70
L N ++ R+ +H IIKSP C + L R+L
Sbjct: 25 LLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERN 84
Query: 71 ------FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKL 124
CA + SG L A ++F + + D ++N MI S + L
Sbjct: 85 IFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMI------SGFEQHGRFDEALVY 138
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMA 184
+ QM G + +F L C D +G+ ++ V + DV++ ++++ ++
Sbjct: 139 FAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSK 198
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
CG V A+ +FDEM+ R VSWN++I Y ++G +D
Sbjct: 199 CGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVD------------------------ 234
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR-SG 303
EAL++F EM VE PD++T+ASV+SACA + AI G+ +H + +
Sbjct: 235 -------EALKIFVEMIKCGVE----PDEVTLASVVSACATISAIKEGQQIHARVVKCDE 283
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMP---------------------------- 335
D+++G AL+DMY KC + A +F MP
Sbjct: 284 FRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFS 343
Query: 336 ---KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
KD + W A+I+ NG +EA FR ++ E V P H TF LL+ACA+ ++
Sbjct: 344 NMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQL 403
Query: 393 GRWCFVMM-----RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GR + R Y + V+ +ID+ + G R+ + M +E D W A
Sbjct: 404 GRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHM-LEKDCVSWNA 462
Query: 448 LLGGCQMHG 456
++ G +G
Sbjct: 463 MIVGYAQNG 471
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 287/518 (55%), Gaps = 44/518 (8%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLIT-RLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
M ++ +I Q+I SP + +LI +L+ CA ++ A +F+H+ +++ +
Sbjct: 1 MAQVLQIQAQLITSPIPSSVVDPNLIAVKLIGACA--DHANVRQAALIFAHLASPNIFAH 58
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCT--GISPDCLTFPFLLKECTKRLDGLVGA 157
N ++A A ++H ++ + + + +PD TF +LK C + G
Sbjct: 59 NATLKALA------QNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQ 112
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++ V K G ++FV+NS+I ++ G++ AR LFD
Sbjct: 113 KIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFD--------------------- 151
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
++F R RN+ WN++I G+ Q + +A+E+F+ MQ V P+ +T+
Sbjct: 152 ------EMFVR--DRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFG---GVVPNDVTLV 200
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
SVL ACA+LGA+D GKW+ G++ R + + +G AL DMY KCGC+ A VF +M ++
Sbjct: 201 SVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEER 260
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
D ++W+ +I A+ G+ EAF F EM G +PN V F+GLL+AC H+GLV+KG CF
Sbjct: 261 DVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCF 320
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
M Y V P V HY C++D+LSRAG +AE +I SMPM+P+V +WGALLGGC+++ +
Sbjct: 321 NTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRD 380
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
G++V Q++++LD + YV L ++Y+ GR DD K R M+E G+ K PGCS +
Sbjct: 381 SGRGQRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLK-TPGCSWI 439
Query: 518 EVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
EVD VHEF M ++ ++ L MK G+
Sbjct: 440 EVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMKLAGY 477
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/534 (35%), Positives = 288/534 (53%), Gaps = 41/534 (7%)
Query: 44 LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMI 103
L+ +H ++ S L + H + F +L+ S LSYA V + + L +N I
Sbjct: 1227 LRALHAHLVVSGRLASPSHLAA-----FLASLASSNHLSYARLVLPQ-RPATLLAHNAFI 1280
Query: 104 RANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK-----------------E 146
RA A CL + + PD + FL++ E
Sbjct: 1281 RALARGPR--------PCLA-FAAFRDLPLPPDHYSLNFLVRAATALVASAAEEKHVSAE 1331
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
RL + S +G V++G D VQ+ V+S++ A G V S+R F E++ DVV
Sbjct: 1332 VNARLQAV---SAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVVCV 1388
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
AM+ GD+D A DLF M +R+ +W+++I G++ GR+REAL LF EM S+
Sbjct: 1389 TAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGT- 1447
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+ T+ SVL+ACA +G +D GKWVH Y+R G+ + +GTALVDMY KCG V
Sbjct: 1448 ---TVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVT 1504
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A VF+ M +++ WT+ +S A+NG G E F+ ME G++PN V+FV +L C+
Sbjct: 1505 AMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSM 1564
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+GLV++GR CF M Y V+P HY CM+D+ RAG +A I MPMEP VWG
Sbjct: 1565 AGLVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWG 1623
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALL ++H +V+LG+ L+ ++ N A +V L ++YA++ + V + R +MK +G
Sbjct: 1624 ALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKG 1683
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIR 560
++K VPG S++EVDG VHEF + G E+ L+L + + ++ G+ R
Sbjct: 1684 VKK-VPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTR 1736
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 189/567 (33%), Positives = 308/567 (54%), Gaps = 84/567 (14%)
Query: 62 HHSLITRLLFFCALSVSGSLS--YATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
HH L LS+ GSL YA +VF+H + D+ T+N M+RA N
Sbjct: 8 HHKPSLNKLIAHVLSM-GSLGVGYAYSVFAHTRELDVLTWNSMLRAF------VNSNMPR 60
Query: 120 KCLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKF------------ 166
+ L+ Y +ML + PD TFP LLK C L+ VG ++GQVVK+
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 167 ----GVCDDV---------------FVQNSVISLFMACGFVTSARMLF----------DE 197
C D+ V S+IS +M A +L+ DE
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180
Query: 198 MSNRDVVSW-----------------------------NAMIIGYLRSGDLDVALDLFRR 228
++ +VS +A++ Y + GDL A +F +
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDK 240
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
+ +++++W+++I G+V+ R+ EAL+LF+E+ S ++P+++TI +V+SACA LG
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS---NMRPNEVTILAVISACAQLGD 297
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
++ G+WVH Y+ R+ V + +L+DM+ KCG ++ A +F M KD ++W +M++
Sbjct: 298 LETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNG 357
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
FAL+G G+EA FR M+ ++P+ +TF+G+L+AC+H+GLV++G+ F + +Y V
Sbjct: 358 FALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRL 417
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
HY CM+D+L RAGL +EA IR MP++PD +WG++LG C+++ N+ELGE+ A++L
Sbjct: 418 KSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFL 477
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM 528
+ L+P N Y+ L ++YAK +++VKK R LM E+GI+K PGCSSV +D + H F
Sbjct: 478 LKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQK-TPGCSSVVIDNIAHSFLA 536
Query: 529 KGSPKVVKEELVLILNGLSKIMKNGGF 555
E+ ++L + + +K G+
Sbjct: 537 GDCSHPEIAEISIMLRQVREKLKLAGY 563
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 197/563 (34%), Positives = 295/563 (52%), Gaps = 67/563 (11%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPC-LQTNDHHSLIT------------- 67
PN S +L++ + K E ++IH Q++K C L H SLI+
Sbjct: 62 PNSYSFPFLLKSCA-KSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARK 120
Query: 68 -------RLLFFCALSVSGSLSY-----ATNVFSHIKRSDLYTYNIMIRANACKSSETND 115
R + C ++G S A VF I D+ ++N MI + +
Sbjct: 121 VFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMI------TGYVEN 174
Query: 116 THSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ 175
+ L+L+K+M+ T + PD T ++ C + +G V+ V
Sbjct: 175 GRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVD----------- 223
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
GF +S +++ NA+I Y + GD++ A LF + +++
Sbjct: 224 ----DDDDDHGFSSSLKIV------------NALIDLYSKCGDVETAFGLFEGLSCKDVV 267
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SWN++I G+ +EAL LFQEM S P+ +T+ SVL ACA+LGAID G+W+
Sbjct: 268 SWNTLIGGYTHTNLYKEALLLFQEMLRSGE----CPNDVTLLSVLPACAHLGAIDIGRWI 323
Query: 296 HGYLRRS--GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG 353
H Y+ + G+ + + T+L+DMY KCG +E A+ VF M + +W AMI FA++G
Sbjct: 324 HVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHG 383
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
AFD F M V P+ +TFVGLLSAC+HSGL++ GR F M Y + P + HY
Sbjct: 384 RANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHY 443
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP 473
CMID+L +GLF EAE +I +MPMEPD +W +LL C+ HGN+EL E AQ LI ++P
Sbjct: 444 GCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEP 503
Query: 474 LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPK 533
N YV L ++YA AGR++DV + R ++ +G++K VPGCSS+EVD VVHEF +
Sbjct: 504 ENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKK-VPGCSSIEVDSVVHEFIIGDKLH 562
Query: 534 VVKEELVLILNGLSKIMKNGGFG 556
+ E+ +L + ++ GF
Sbjct: 563 PRRREIYHMLEEMDVQLEEAGFA 585
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 218/394 (55%), Gaps = 17/394 (4%)
Query: 69 LLFFCALSVS-GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQ 127
LL C +S L YA +VF I+ +L +N M+R +A S + L++Y +
Sbjct: 1 LLELCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVS------ALEMYVR 54
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
M+ G P+ +FPFLLK C K G ++ QV+K G D +V S+IS++ G
Sbjct: 55 MVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGG 114
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+ AR +FD S+RDVVS A+I GY GD A +F + +R++ SWN++ITG+V+
Sbjct: 115 LEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVEN 174
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS----G 303
GR EALELF+EM ++ V+PD+ T+ SV+SACA G+I+ G+ VH ++ G
Sbjct: 175 GRYEEALELFKEMMRTN----VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHG 230
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
+ I AL+D+Y KCG VE A+G+F+ + KD ++W +I + KEA F+
Sbjct: 231 FSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQ 290
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSR 422
EM G PN VT + +L ACAH G ++ GRW V + + + V +ID+ ++
Sbjct: 291 EMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAK 350
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
G A ++ SM + + W A++ G MHG
Sbjct: 351 CGDIEAAHQVFNSM-LYRSLSSWNAMIFGFAMHG 383
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 201/589 (34%), Positives = 303/589 (51%), Gaps = 81/589 (13%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
ID + +L++IH +++ L LIT+L+ A S G +++A VF + R
Sbjct: 28 IDSSTHKAQLRQIHARLL---VLGLQFSGFLITKLIH--ASSSYGDITFARQVFDDLPRP 82
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
++ +N +IR + + H L +Y +M +SPD TFP LLK C
Sbjct: 83 QVFPWNAIIRGY------SRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQ 136
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD--EMSNRDVVSWNAMIIG 212
+G V+ QV + G DVFVQN +I+L+ C + AR +F+ + R +VSW A++
Sbjct: 137 MGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSA 196
Query: 213 YLRSGDLDVALDLFRRMKKRNI----FSWNSIITGFV------QG--------------- 247
Y ++G+ AL++F +M+K ++ + S++ F QG
Sbjct: 197 YAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETE 256
Query: 248 --------------GRAREALELFQEMQSSSV-----------------------EEM-- 268
G+ A LF +M+S ++ EM
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMIN 316
Query: 269 --VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
V+PD I+I S +SACA +G+++ +W+ Y+ RS DV I +AL+DM+ KCG VE
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVEC 376
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A VF +D + W+AMI + L+G +EA +R ME +GV PN VTF+GLL AC H
Sbjct: 377 ARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNH 436
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
SG+V +G W F M + + P HYAC+ID+L RAG +A +I+ MP++P V VWG
Sbjct: 437 SGMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALL C+ H +VELG+ AQ L +DP N YV L ++YA A +D V + R MKE+G
Sbjct: 496 ALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 555
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ K+V GCS VEV G + F + EE+ + + +K GGF
Sbjct: 556 LNKDV-GCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGF 603
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/462 (37%), Positives = 268/462 (58%), Gaps = 13/462 (2%)
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCL 138
SL A VF + D+ ++ ++ A + + +L+ +M+ G + P+ +
Sbjct: 193 SLDDAGKVFDEMPERDVVSWTTLVDGYA------RAGLADEAWRLFCRMVVVGGMRPNAV 246
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T + + G ++ V + GV V + N+++ +F CG V AR +FD M
Sbjct: 247 TLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGM 306
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+DV SW +M+ Y + GDL+ A LF+ M +RN+ SW+ +I + Q + EA+ LF+
Sbjct: 307 EVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFR 366
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH-GYLRRSGLDCDVVIGTALVDM 317
EM ++ V+ P T+ SVLSACA LG +D G+W++ Y+ + + V +G AL+DM
Sbjct: 367 EMIAAGVD----PIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDM 422
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
+ KCG V A +F EM +++ ++W MI A++G +EA F +++ E + P+ +TF
Sbjct: 423 FAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITF 482
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+GLL++C+HSGLV +GR F M Y +EP V HYACMID+L + GL EA + R MP
Sbjct: 483 LGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMP 542
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
ME D WGALL C+MHGNVE+G VA L++LDP + YV + +YA ++D VK
Sbjct: 543 MEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKM 602
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEEL 539
R M++RG++K PGCSS+EV+G H+F + EE+
Sbjct: 603 LRMTMRDRGVKKN-PGCSSIEVEGKFHDFLVADVSHACSEEI 643
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 210/492 (42%), Gaps = 92/492 (18%)
Query: 11 SLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL 70
++L PA + N T +L + ++ C + R L ++H + + H +RLL
Sbjct: 19 AVLPRPAWNTNRNLVVTHPLL-SLLESCASFRRLLQLHALLTVTGLAA---HRFPASRLL 74
Query: 71 FFCALSVSGSLSYATNVFSHIKRS-DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
FCALS L++A + + + Y M+R + L L+++++
Sbjct: 75 AFCALSTPPRLAHAAAILARASPGPNAYMLGTMMRGF------LRARLPARALGLFRRVV 128
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYG------QVVKFG-VCDDVFVQNSVISLF 182
+ D TF F +K + G + G +K G V + V V N+++ +
Sbjct: 129 RDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFY 188
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
+ A +FDEM RDVVSW ++ GY R+G D A LF RM
Sbjct: 189 ANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRM------------- 235
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
V GG ++P+ +T+ + +SA +G + G +H Y+
Sbjct: 236 -VVVGG--------------------MRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEG 274
Query: 303 GLDCDVVIGTALVDMYGKCGCV-------------------------------ERAYGVF 331
G+ V + ALVDM+GKCGCV E A +F
Sbjct: 275 GVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLF 334
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
K+MP+++ ++W+ MI+ ++ +EA FREM A GV P T V +LSACA G ++
Sbjct: 335 KDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLD 394
Query: 392 KGRWCFVMMRHVYLVEPHVYHYA----CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GRW + Y+V + +ID+ ++ G EA +L M E +V W
Sbjct: 395 LGRWIY----ENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMA-ERNVVSWNT 449
Query: 448 LLGGCQMHGNVE 459
++ +HG E
Sbjct: 450 MIMAHAVHGQSE 461
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/485 (36%), Positives = 274/485 (56%), Gaps = 16/485 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ K L +IH ++ HHS F + + YAT +F+H
Sbjct: 16 LHNTKTQTHLPQIHAHFLRHGL-----HHSNQILSHFVSVCTSLHQIPYATTIFNHTHHP 70
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
++ +N +I+A++ H +K+ +L PD TFP LLK + D
Sbjct: 71 NILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNIL-----PDNFTFPPLLKATSYLRDYD 125
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G ++ V G V+ ++ ++ CG + A +FDEM +R+VV WN MI G+
Sbjct: 126 LGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFC 185
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+ GDL++ L LF+RM +R++ SWN +I+ Q + EA +F+EM +E+ +PD
Sbjct: 186 KMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREM----LEQGFEPDDA 241
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV-IGTALVDMYGKCGCVERAYGVFKE 333
T+ +VL CA LG +D G+W+H Y GL V+ +G +LVD Y KCG +E A+ VF E
Sbjct: 242 TLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNE 301
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M KK+ ++W AMIS LNG G+ + F +M +GV P+ TFVG+L+ CAH+G V+KG
Sbjct: 302 MTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKG 361
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R F M + + P + HY C++D+L R G EA LIR+MP+ P+ +WGALL C+
Sbjct: 362 REIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACR 421
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
HG+ E+ E A+ L+ L+P N YV L ++YA+ ++++V+K R LM+ GI+K PG
Sbjct: 422 THGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKN-PG 480
Query: 514 CSSVE 518
S+++
Sbjct: 481 QSALQ 485
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 186/515 (36%), Positives = 287/515 (55%), Gaps = 48/515 (9%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M + +H IIKS + ND SL T LL C + SLSYA VFS I D YN
Sbjct: 1 MNNVYRLHCYIIKSS--KQNDPLSLRT-LLLSCVAAAPESLSYARYVFSRIPSPDTIAYN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+IR++ S +HS L + M GI D TFPF+LK C+ RL + ++
Sbjct: 58 TIIRSH----SRFFPSHS---LSYFFSMRSNGIPLDNFTFPFVLKACS-RLQ--INLHLH 107
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+VK+G+ D+FVQN++I ++ CG L+
Sbjct: 108 SLIVKYGLGSDIFVQNALICVYGYCG-------------------------------SLE 136
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
+A+ +F M +R+ SW+++I F+ G A EAL+LF++MQ +E+ V PD++T+ SV+
Sbjct: 137 MAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQ---LEDKVVPDEVTMLSVI 193
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SA ++LG ++ G+WV ++ R G V +GTAL+DM+ +CG ++ + VF++M ++ L
Sbjct: 194 SAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVL 253
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
WTA+I+ ++G EA F M GV+P++VTF G+L AC+H GLV++G F +
Sbjct: 254 TWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESI 313
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
R VY ++P + HY CM+DIL RAGL +EA + MPM+P+ +W LLG C H N+ L
Sbjct: 314 RKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGL 373
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
EKV + + + V L ++Y AGR+ + R+ M+E+ I KE PGCSS+ VD
Sbjct: 374 AEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKE-PGCSSINVD 432
Query: 521 GVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+HEF + E++ L+ + ++N G+
Sbjct: 433 QTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGY 467
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 294/535 (54%), Gaps = 43/535 (8%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
P +++ ++ L + I C L +IH II++ +Q +H + + L ALS S
Sbjct: 61 PKSRDESENQLISLIKSCSKKTHLLQIHAHIIRTSLIQ---NHFISLQFLSRAALSPSRD 117
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
+ Y++ VFS I + YN+MIRA + S + LY++M G+ P+ L+
Sbjct: 118 MGYSSQVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFY------LYREMRRRGVPPNPLSS 171
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
F++K C + + G ++ ++++ G D + +++ L+ C A +FDE+
Sbjct: 172 SFVMKSCIRISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQ 231
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
D VSW N +I+ + R R+AL +F M
Sbjct: 232 WDTVSW-------------------------------NVLISCCIHNRRTRDALRMFDIM 260
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
QS++ + +PD +T +L ACA LGA++ G+ VH Y+ G D + + +L+ MY +
Sbjct: 261 QSTA--DGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSR 318
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG +E+AY +FK M +++ ++W+AMIS FA++GYG+EA + F +M+ GV P+ T G+
Sbjct: 319 CGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGV 378
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
LSAC+H GLV+ G F M V+ +EP+++HY CM+D+L RAGL +A +LI SM ++P
Sbjct: 379 LSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKP 438
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
D +W LLG C++H + LGE+V +LI+L YV L ++Y+ G +D V R
Sbjct: 439 DSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRK 498
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
MKE+GI+ PGCS++E+ G VHEF + +E+ +L+ + K +K G+
Sbjct: 499 FMKEKGIQTS-PGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGY 552
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 279/455 (61%), Gaps = 10/455 (2%)
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
++ NA S + + + L+L+ +M+ GI PD T+ ++ C+ R D + AS+
Sbjct: 225 VVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVR 284
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM-SNRDVVSWNAMIIGYLRSGDLD 220
+ + + + FV+ +++ ++ CG + +AR +FDE+ + R+ V+WNAMI Y R G+LD
Sbjct: 285 TLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLD 344
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A +LF M RN+ +WNS+I G+ Q G++ A+ELF+EM ++ + + PD++T+ SV+
Sbjct: 345 SARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITA---KKLTPDEVTMVSVI 401
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SAC +LGA++ G WV +L + + + A++ MY +CG +E A VF+EM +D +
Sbjct: 402 SACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVV 461
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
++ +IS FA +G+G EA + M+ G+ P+ VTF+G+L+AC+H+GL+E+GR F +
Sbjct: 462 SYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESI 521
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+ +P + HYACM+D+L R G +A+R + MPMEP V+G+LL ++H VEL
Sbjct: 522 K-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVEL 576
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
GE A L +L+P N ++ L ++YA AGR+ DV++ R MK+ G++K G S VE
Sbjct: 577 GELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKK-TTGWSWVEYG 635
Query: 521 GVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G +H+F + +++ +L L K M+ G+
Sbjct: 636 GKLHKFIVADRSHERSDDIYQLLIELRKKMREAGY 670
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 144/565 (25%), Positives = 236/565 (41%), Gaps = 127/565 (22%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
N L+++H QII + HH+ LL + Y +F+ +++ +
Sbjct: 13 NFSHLRQLHAQIIHNSL----HHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVF 68
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
M+R S D K + +++ M G+ PD +P L+K G G
Sbjct: 69 TSMLRF----YSHLQD--HAKVVLMFEHMQGCGVRPDAFVYPILIKSA-----GNGGIGF 117
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN--RDVVSWNA--------- 208
+ V+K G D FV+N+VI ++ G + AR +FDE+ + R V WNA
Sbjct: 118 HAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWE 177
Query: 209 ----------------------MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
M+ GY + DL+ A F M +R++ SWN++++G+ Q
Sbjct: 178 SEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQ 237
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G A E L LF EM ++ +E PD+ T +V+SAC+ G + L + +
Sbjct: 238 NGLAEEVLRLFDEMVNAGIE----PDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL 293
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKE--------------------------------M 334
+ + TAL+DMY KCG + A +F E M
Sbjct: 294 NCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTM 353
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKG 393
P ++ + W +MI+ +A NG A + F+EM A+ + P+ VT V ++SAC H G +E G
Sbjct: 354 PGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELG 413
Query: 394 RWC--FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP-------------- 437
W F+ + L + + MI + SR G +A+R+ + M
Sbjct: 414 NWVVRFLTENQIKL---SISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGF 470
Query: 438 --------------------MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
+EPD + +L C G +E G KV + + D ++H
Sbjct: 471 AAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-PAIDH- 528
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLM 502
Y + D+ + G +D K+T M
Sbjct: 529 -YACMVDLLGRVGELEDAKRTMERM 552
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 183/515 (35%), Positives = 293/515 (56%), Gaps = 27/515 (5%)
Query: 18 KVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCAL 75
+VSP + L+ ++ + E+K+IH II S CL ++ +SL+ F+ L
Sbjct: 127 RVSPDRQTFLHLMKASSF-----LSEVKQIHCHIIVSGCLSLGNYLWNSLVK---FYMEL 178
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
GSL +A VF+ + + D+ ++N+MI A + L+LY +M+ GI P
Sbjct: 179 ---GSLGFAEKVFAIMPQPDVSSFNVMIVGYA------KQGFGLEALELYYKMVSDGIEP 229
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFG--VCDDVFVQNSVISLFMACGFVTSARM 193
D T LL C D +G V+G + + G ++ ++N+++ ++ C A+
Sbjct: 230 DEYTLLGLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILRNALLDMYFKCKESGLAKR 289
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG-RARE 252
FD + +D+ SWN M++G++R GD++ A +F +M +R++ SWNS++ + + G R
Sbjct: 290 AFDALKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRA 349
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
ELF EM + E VKPD++T+ S++S A G + HG+WVHG + R L+ D + +
Sbjct: 350 VRELFYEML---IVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLMIRLQLEGDAFLSS 406
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
AL+DMY KCG +ERA+ VFK +KD WT+MI+ FA +GYG++A F+ M+ E V P
Sbjct: 407 ALIDMYCKCGLIERAFMVFKTATEKDVPLWTSMITGFAFHGYGQQALQLFKRMQEEDVTP 466
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
N VT + +L+AC+HSGLVE+G F M+ + P HY ++D+L RAG EA+ +
Sbjct: 467 NKVTLLAVLTACSHSGLVEEGLHVFYHMKEKFGFHPETEHYGSLVDLLCRAGRLEEAKDI 526
Query: 433 IRS-MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
+++ MPM P +WG++L C+ ++E E L+ L+P YV L ++YA GR
Sbjct: 527 VQNKMPMRPSQSMWGSILSACREGEDIETAELALSELLKLEPEKEGGYVLLSNIYATVGR 586
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ KTR M+ RG++K S V V+G VH F
Sbjct: 587 WGYSDKTREAMESRGVKKTAGYSSVVGVEG-VHSF 620
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 204/467 (43%), Gaps = 104/467 (22%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVF-SHIKR 93
++ C + + K++ QI++ + ++RL+FF A++ +L A +F
Sbjct: 40 LENCSSRNQFKQVLAQIMRFNLIGVTFP---MSRLIFFSAITYPENLDLAKLLFLDFTPN 96
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+++ YN MI A + +E C LY M+ +SPD TF L+K
Sbjct: 97 PNVFVYNTMISAVSSSKNE--------CFGLYSSMIRYRVSPDRQTFLHLMK-------- 140
Query: 154 LVGASVYGQVVKFGVCDDV---------FVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
AS + VK C + ++ NS++ +M G + A +F M DV
Sbjct: 141 ---ASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQPDVS 197
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
S+N MI+GY + G EALEL+ +M S
Sbjct: 198 SFNVMIVGYAKQ-------------------------------GFGLEALELYYKMVSDG 226
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG--LDCDVVIGTALVDMYGKC- 321
+E PD+ T+ +L C +L I GK VHG++ R G ++++ AL+DMY KC
Sbjct: 227 IE----PDEYTLLGLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILRNALLDMYFKCK 282
Query: 322 ------------------------------GCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
G +E A VF +MP++D ++W +++ ++
Sbjct: 283 ESGLAKRAFDALKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSK 342
Query: 352 NGYGKEAF-DTFREME-AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
G + A + F EM E V+P+ VT V L+S A++G + GRW +M + L E
Sbjct: 343 KGCDQRAVRELFYEMLIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLMIRLQL-EGD 401
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ + +ID+ + GL A + ++ E DV +W +++ G HG
Sbjct: 402 AFLSSALIDMYCKCGLIERAFMVFKT-ATEKDVPLWTSMITGFAFHG 447
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 183/530 (34%), Positives = 297/530 (56%), Gaps = 22/530 (4%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHS--LITRLLFFCALSVSGSL 81
++S KL+L++ C ++ LK+IH Q + L + L+ R + L G+
Sbjct: 3 RQSLKLLLQS----CADLVTLKQIHAQALTQGLLFIEQPLACKLVNR---YAKL---GNP 52
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A VF +I+ D TY +I N S++ K ++ +++ G+ PD +
Sbjct: 53 RDAQKVFGYIQDPDRVTYTSLI--NLYLSTQL----PIKAFSVFSKLVNEGLRPDSHSVV 106
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
L C K+ D L G V+G + +F + + V N++I ++ G + A+++F +M +
Sbjct: 107 GALSACGKKQDLLNGKLVHGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMGIK 166
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
DV SW +++ G++ L+ A +F M RN +W ++ITG+V+GG LE+F++M+
Sbjct: 167 DVSSWTSLLNGFVMCNGLESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMK 226
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
+ E +P IT +VLS CA LGA DHG+ VHGY+ + LD V + AL+DMY K
Sbjct: 227 A---EGENQPTVITAVAVLSGCADLGAHDHGQAVHGYISKVNLDKGVTVSNALMDMYSKG 283
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
GCVE A +F + KKD +WT MIS + +G G A + F +M GV PN VTF+ +L
Sbjct: 284 GCVESAMKIFDRLVKKDVFSWTTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVL 343
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
S C+HSGL+ + F M Y EP + HY CM+D+L RAGL EA+ LI +MPM+PD
Sbjct: 344 SGCSHSGLLVEANKLFNGMIQCYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNMPMDPD 403
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+W +LL C N+ L E + +I+L+P + YV L ++Y A R D +K R +
Sbjct: 404 AVIWRSLLSACMNQRNLGLAEIAGKKIIELEPHDDGVYVLLSNIYHVANRMKDARKMRKM 463
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
M ++ + K+ P CS +E++GVVH+F + + ++ ++L +++ ++
Sbjct: 464 MGDQKVMKK-PACSYIELNGVVHQFHTENATHHASTKIYMLLEMINEHLR 512
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 239/355 (67%), Gaps = 9/355 (2%)
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
++ CG ++ AR +FDEM +++V+ W +M+ GY+ G+LD A +LF R +++ W ++
Sbjct: 1 MYCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAM 60
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
I G+VQ EA+ LFQEMQ + VKPDK + ++L+ CA +GA++ G W+HGY+
Sbjct: 61 INGYVQFNHFDEAVALFQEMQI----QRVKPDKFVLVALLTGCAQMGALEQGTWIHGYID 116
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
G+ D V+GT+L++MY KCGC+E+A +F + +KDT WT++I A+NG +A +
Sbjct: 117 EKGIPVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALE 176
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F +M+ P+ VTF+G+LSAC+H GLVE+GR F M +Y +EP + HY C+ID+L
Sbjct: 177 LFSKMKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLL 236
Query: 421 SRAGLFSEAERLIRSM---PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
RAG EAE LI+ + E V ++G+LL C+++ NV++GE+VA+ L+ ++ + +
Sbjct: 237 GRAGQLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKIESRDSS 296
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSP 532
+ L ++YA AGR+ DV + R MK+ G++K VPGCSS+EVDG+VHEF + G+P
Sbjct: 297 VHTLLANIYASAGRWVDVNRVRREMKDLGVKK-VPGCSSIEVDGIVHEF-LVGNP 349
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 106/257 (41%), Gaps = 42/257 (16%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A +F D+ + MI + H + + L+++M + PD
Sbjct: 37 GELDKARELFERSPVKDVVLWTAMI------NGYVQFNHFDEAVALFQEMQIQRVKPDKF 90
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
LL C + G ++G + + G+ D V S+I ++ CG + A +F +
Sbjct: 91 VLVALLTGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALRIFCGL 150
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+D +W ++I G +G AL+LF +MK+
Sbjct: 151 REKDTATWTSIICGLAMNGKTSKALELFSKMKQ--------------------------- 183
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK-WVHGYLRRSGLDCDVVIGTALVDM 317
VE + PD++T VLSAC++ G ++ G+ + + ++ + L+D+
Sbjct: 184 ------VEAI--PDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDL 235
Query: 318 YGKCGCVERAYGVFKEM 334
G+ G ++ A + K++
Sbjct: 236 LGRAGQLDEAEELIKKI 252
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/440 (39%), Positives = 258/440 (58%), Gaps = 9/440 (2%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L +++M G P+ +T +L CT D G V+G VV+ G+ +VFV ++++
Sbjct: 162 EALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALV 221
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR----NIF 235
+++ +C + A+++FD MS RD VSWN +I Y + + + L +F RM N
Sbjct: 222 NMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYA 281
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SWN++I G +Q GR +ALE+ MQ+S KP++ITI SVL AC L ++ GK +
Sbjct: 282 SWNAVIGGCMQNGRTEKALEVLSRMQNSGF----KPNQITITSVLPACTNLESLRGGKQI 337
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
HGY+ R D+ TALV MY KCG +E + VF M K+DT++W MI +++G G
Sbjct: 338 HGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNG 397
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+EA FREM GVRPN VTF G+LS C+HS LV++G F M + VEP H++C
Sbjct: 398 EEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSC 457
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
M+D+LSRAG EA I+ MP+EP WGALLGGC+++ NVELG A L +++ N
Sbjct: 458 MVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDN 517
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
YV L ++ A + + +TR LM++RG+ K PGCS ++V VH F +
Sbjct: 518 PGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKN-PGCSWIQVRNRVHTFVVGDKSNDQ 576
Query: 536 KEELVLILNGLSKIMKNGGF 555
+E+ L+ + + M+ G+
Sbjct: 577 SDEIYRFLDYMGEKMRIAGY 596
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 196/444 (44%), Gaps = 86/444 (19%)
Query: 69 LLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM 128
L F S SG L A ++F I + DL T+ I+I S+ T S + ++ Y
Sbjct: 15 LKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILI------SALTKHGRSLEAIQYYNDF 68
Query: 129 LCTG-ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
+ PD L + K C D + V+ ++FG C DV + N++I ++ C
Sbjct: 69 RHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRC 128
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
AR++F+ M RDV+SW +M Y+ G L AL FR+M + G
Sbjct: 129 SEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMG--------------LNG 174
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
R P+ +T++S+L AC L + G+ VHG++ R+G+ +
Sbjct: 175 ER---------------------PNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGN 213
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
V + +ALV+MY C + +A VF M ++DT++W +I+ + LN ++ F M +
Sbjct: 214 VFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMS 273
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
EGV N+ ++ ++ C +G EK +++LSR
Sbjct: 274 EGVGLNYASWNAVIGGCMQNGRTEKA-----------------------LEVLSR----- 305
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD--- 484
+++ +P+ ++L C ++ G+++ Y+ H F+ +L
Sbjct: 306 -----MQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYI-----FRHWFFQDLTTTTA 355
Query: 485 ---MYAKAGRFDDVKKTRNLMKER 505
MYAK G + ++ ++M +R
Sbjct: 356 LVFMYAKCGDLELSRRVFSMMTKR 379
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 158/318 (49%), Gaps = 21/318 (6%)
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y SGDL A LF ++ + ++ +W +I+ + GR+ EA++ + + + + V+PD
Sbjct: 21 YSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNC---VEPD 77
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
K+ + SV ACA L + + K VH R G DV++G AL+DMYGKC C E A VF+
Sbjct: 78 KLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE 137
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
MP +D ++WT+M S + G +EA FR+M G RPN VT +L AC ++
Sbjct: 138 GMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKS 197
Query: 393 GRWCFVMMRHVYLVEP----HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
GR H ++V +V+ + ++++ + +A+ + SM D W L
Sbjct: 198 GREV-----HGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRR-DTVSWNVL 251
Query: 449 LGGCQMHGNVELGEKV-AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+ ++ E G V + + + LN+A + + + GR + + + M+ G
Sbjct: 252 ITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGF 311
Query: 508 RKE-------VPGCSSVE 518
+ +P C+++E
Sbjct: 312 KPNQITITSVLPACTNLE 329
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 261/449 (58%), Gaps = 11/449 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + +F +L YN ++ S+ +G+ L + +ML G PD +
Sbjct: 272 GDMYAVREIFDEFSDKNLVMYNTIM------SNYVQHGLAGEVLVVLDEMLQKGQRPDKV 325
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T + C + D VG S + V + G+ + N++I ++M CG +A +FD M
Sbjct: 326 TMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSM 385
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
SN+ VV+WN++I G +R G+L++AL +F M + N+ SWN++I VQ EA++L +
Sbjct: 386 SNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLR 445
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ+ + K D++T+ + SAC YLGA+D KW++ Y+ ++ + D+ +GTALVDM+
Sbjct: 446 EMQNQGI----KGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMF 501
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
+CG A VF+ M K+D AWTA I V A+ G K A + F EM + V+ + FV
Sbjct: 502 SRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFV 561
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
LL+A +H G V++GR F M ++ V P + HY CM+D+L RAGL EA L++SMP+
Sbjct: 562 ALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPI 621
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+P+ +WG+ L C+ H NVE + + L P +V L ++YA AG+++DV +
Sbjct: 622 KPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARV 681
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFS 527
R MKE+G +K V G SS+EV G++ EF+
Sbjct: 682 RLQMKEKGFQK-VAGSSSIEVHGLIREFT 709
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 223/511 (43%), Gaps = 79/511 (15%)
Query: 9 SYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITR 68
S S L P P S + CK + ELK++H ++K N +
Sbjct: 11 SSSPLLLPTTTQKPKNSS--------LQTCKTLIELKQLHCNMLKKGVFNIN-------K 55
Query: 69 LLFFCA-LSVSGSLSYATNVFSHIK--RSDLYTYNIMIRANACKSSETNDTHSGKC---L 122
L+ C + SL+YA N F + + LYT N +IR A SG C +
Sbjct: 56 LIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAA---------SGLCKEAI 106
Query: 123 KLYKQMLCT-GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
+Y M+ GI PD TFPFLL C+K + G V+G VVK G+ D+FV NS+I
Sbjct: 107 FIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHF 166
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ ACG V D+ +F M +RN+ SW S+I
Sbjct: 167 YAACGKV-------------------------------DLGRKVFDEMLERNVVSWTSLI 195
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
G+ A+EA+ LF EM VE V+P+ +T+ +SACA L ++ GK V +
Sbjct: 196 NGYSVVNMAKEAVCLFFEM----VEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTE 251
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
G+ + ++ AL+DMY KCG + +F E K+ + + ++S + +G E
Sbjct: 252 LGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVV 311
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY----ACMI 417
EM +G RP+ VT + ++ACA G + G+ H Y+ + +I
Sbjct: 312 LDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGK-----SSHAYVFRNGLERLDNISNAII 366
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+ + G A ++ SM V W +L+ G G +EL ++ ++ N
Sbjct: 367 DMYMKCGKREAACKVFDSMS-NKTVVTWNSLIAGLVRDGELELALRI---FGEMPESNLV 422
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
+ + +A F++ M+ +GI+
Sbjct: 423 SWNTMIGAMVQASMFEEAIDLLREMQNQGIK 453
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 200/455 (43%), Gaps = 91/455 (20%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + VF + ++ ++ +I S N CL + +M+ G+ P+ +
Sbjct: 171 GKVDLGRKVFDEMLERNVVSWTSLING----YSVVNMAKEAVCL--FFEMVEVGVEPNPV 224
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T + C K D +G V + + GV + V N+++ ++M CG + + R +FDE
Sbjct: 225 TMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEF 284
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
S++++V + N+I++ +VQ G A E L +
Sbjct: 285 SDKNLVMY-------------------------------NTIMSNYVQHGLAGEVLVVLD 313
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM +++ +PDK+T+ S ++ACA LG + GK H Y+ R+GL+ I A++DMY
Sbjct: 314 EM----LQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMY 369
Query: 319 GKCG-----C--------------------------VERAYGVFKEMPKKDTLAWTAMIS 347
KCG C +E A +F EMP+ + ++W MI
Sbjct: 370 MKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIG 429
Query: 348 VFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
+EA D REM+ +G++ + VT VG+ SAC + G ++ +W + +E
Sbjct: 430 AMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYT------YIE 483
Query: 408 PHVYHY-----ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN----V 458
+ H ++D+ SR G A R+ +M + DV W A + + GN +
Sbjct: 484 KNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENME-KRDVSAWTAAIRVKAVEGNAKGAI 542
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
EL +++ + + D +V L ++ G D
Sbjct: 543 ELFDEMLKQDVKADDF---VFVALLTAFSHGGYVD 574
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 280/509 (55%), Gaps = 37/509 (7%)
Query: 26 STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYAT 85
ST + + + + K++ E+++ H ++K+ D S + F ++SYA
Sbjct: 37 STPVPILSFTERAKSLTEIQQAHAFMLKTGLFH--DTFSASKLVAFAATNPEPKTVSYAH 94
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
++ + I + +T+N +IRA A N + L ++++ML + PD +F F+LK
Sbjct: 95 SILNRIGSPNGFTHNSVIRAYA------NSSTPEVALTVFREMLLGPVFPDKYSFTFVLK 148
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
C G ++G +K G+ DVFV+N++++++ G+ AR + D M RD VS
Sbjct: 149 ACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS 208
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
WN+++ YL G +D A LF M++RN+ SWN +I+G+ G +EA E+F M V
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Query: 266 ----------------------------EEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
+ KPD T+ SVLSACA LG++ G+WVH
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
Y+ + G++ + + TALVDMY KCG +++A VF+ K+D W ++IS +++G GK+
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
A + F EM EG +PN +TF+G+LSAC H G++++ R F MM VY VEP + HY CM+
Sbjct: 389 ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMV 448
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L R G EAE L+ +P + + +LLG C+ G +E E++A L++L+ + +
Sbjct: 449 DLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSS 508
Query: 478 FYVNLCDMYAKAGRFDDV-KKTRNLMKER 505
Y + ++YA GR++ V RN+ ER
Sbjct: 509 GYAQMSNLYASDGRWEKVIDGRRNMRAER 537
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 28/311 (9%)
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
A + R+ N F+ NS+I + AL +F+EM V PDK + VL
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPV----FPDKYSFTFVLK 148
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
ACA + G+ +HG +SGL DV + LV++YG+ G E A V MP +D ++
Sbjct: 149 ACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS 208
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
W +++S + G EA F EME V ++ ++S A +GLV++ + F M
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSM- 263
Query: 402 HVYLVEP--HVYHYACMIDILSRAGLFSEAERLIRSM----PMEPDVFVWGALLGGCQMH 455
P V + M+ + G ++E + M +PD F ++L C
Sbjct: 264 ------PVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASL 317
Query: 456 GNVELGEKVAQYL----IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
G++ GE V Y+ I+++ L DMY+K G+ D + +R +
Sbjct: 318 GSLSQGEWVHVYIDKHGIEIEGF---LATALVDMYSKCGKIDKALEVFRATSKRDVSTWN 374
Query: 512 PGCSSVEVDGV 522
S + V G+
Sbjct: 375 SIISDLSVHGL 385
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 264/441 (59%), Gaps = 11/441 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L+ A VF + D+ ++N +I C + N K L L+++M + D +
Sbjct: 162 GELAMAQKVFDGMLERDVVSWNSII----CGYYQFN--RFKKVLDLFREMQAINVRADSV 215
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T + + +G + + + GV D+++ N++I ++ G + A +F +M
Sbjct: 216 TMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQM 275
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+++VSWNAMI+GY + G+L A LF M R++ SW S+I G+ + EA++LFQ
Sbjct: 276 KEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQ 335
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM S MVKPD+IT+A+ LSACA+LG++D G+ VH Y+R+ + DV +G +L+DMY
Sbjct: 336 EMMVS----MVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMY 391
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG VE+A VF +M +D+++WT++IS A+NG+ + A + F +M EG+ P H TFV
Sbjct: 392 CKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFV 451
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L ACAH GLV+KG F M + Y + P + HY C++D+L R+G A I+ MP+
Sbjct: 452 GVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPI 511
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
PDV +W LL C++HGN+ L E V++ L+ LDP N+ YV YA + R+DDV K
Sbjct: 512 VPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKI 571
Query: 499 RNLMKERGIRKEVPGCSSVEV 519
R LM+ ++K SS+EV
Sbjct: 572 RKLMEVTNLQKPC-AYSSIEV 591
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 209/459 (45%), Gaps = 78/459 (16%)
Query: 32 RNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHI 91
+ AI ++ +KE+H Q++++ Q + S I+ ++ ALS SL A VF+ I
Sbjct: 18 QRAISNSTSLNSIKELHAQLVRA---QMHIDPSSISEVIKHYALS-PQSLPKAHFVFNQI 73
Query: 92 KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRL 151
+R L +N MI KS ND + Y M GI LTF FL K C +
Sbjct: 74 QRPTLLVWNHMIHG-LSKSDRPNDA-----IHFYNTMYYKGIQGSHLTFIFLFKSCARVS 127
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
D G V +K G +FV N++I +++ G + A+ +FD M RDVVSWN++I
Sbjct: 128 DVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIIC 187
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
GY + F R KK L+LF+EMQ+ + V+
Sbjct: 188 GYYQ----------FNRFKK---------------------VLDLFREMQAIN----VRA 212
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE------ 325
D +T+ +SA +L + G ++ Y+ G+ D+ +G L+DMYG+ G ++
Sbjct: 213 DSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVF 272
Query: 326 -------------------------RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
A +F EMP +D ++WT+MI ++L EA
Sbjct: 273 YQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVK 332
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F+EM V+P+ +T LSACAH G ++ G +R + ++ V+ +ID+
Sbjct: 333 LFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK-HDIKSDVFVGNSLIDMY 391
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ G+ +A ++ M D W +++ G ++G E
Sbjct: 392 CKCGVVEKALQVFNDMKTR-DSVSWTSIISGLAVNGFAE 429
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 176/471 (37%), Positives = 257/471 (54%), Gaps = 48/471 (10%)
Query: 60 NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA--NACKSSETNDTH 117
+ H +++ + G ++ A +F I D+ ++N MI C E
Sbjct: 126 SSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEA---- 181
Query: 118 SGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS 177
L+LYK M+ T + PD T ++ C + +G ++ + G ++ + N
Sbjct: 182 ----LELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNV 237
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
+I L+ CG +++ A LF+ + K+++ SW
Sbjct: 238 LIDLYSKCG-------------------------------EVETACGLFQGLAKKDVISW 266
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N++I G +EAL LFQEM S P+ +T+ SVL ACA+LGAID G+W+H
Sbjct: 267 NTLIGGHTHMNLYKEALLLFQEMLRSGES----PNDVTMLSVLPACAHLGAIDIGRWIHV 322
Query: 298 YL--RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
Y+ R G+ + T+L+DMY KCG +E A VF M + +W AMI FA++G
Sbjct: 323 YINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKA 382
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
AFD F +M G+ P+ +TFVGLLSAC+HSG+++ GR F M Y + P + HY C
Sbjct: 383 NAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGC 442
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
MID+L GLF EA+ +IR+MPMEPD +W +LL C+MH NVELGE AQ LI ++P N
Sbjct: 443 MIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPEN 502
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L ++YA AGR+D V K R L+ ++GI+K PGCSS+E+D VVHEF
Sbjct: 503 PGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKK-APGCSSIEIDSVVHEF 552
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 235/432 (54%), Gaps = 20/432 (4%)
Query: 68 RLLFFCALSVS-GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYK 126
+L+ F LS LSYA ++F I+ +L +N M R +A S S LKLY
Sbjct: 1 QLIEFSVLSPHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSD------SVTALKLYV 54
Query: 127 QMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
M+ G+ P+ +FPFLLK C K + G ++G V+K G D++V S+IS++ G
Sbjct: 55 CMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNG 114
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
+ A +FD S+R VVS+ A+I GY G ++ A LF + +++ SWN++I+G+V+
Sbjct: 115 RLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVE 174
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
+EALEL+++M ++ VKPD+ T+ +V+SACA G+I+ G+ +H ++ G
Sbjct: 175 TCNFKEALELYKDMMKTN----VKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGS 230
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
++ I L+D+Y KCG VE A G+F+ + KKD ++W +I KEA F+EM
Sbjct: 231 NIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEML 290
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSRAGL 425
G PN VT + +L ACAH G ++ GRW V + + + V +ID+ ++ G
Sbjct: 291 RSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGD 350
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV----ELGEKVAQYLIDLDPLNHAFYVN 481
A+++ SM + + W A++ G MHG +L K+ + ID D + +V
Sbjct: 351 IEAAKQVFDSM-LTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDIT---FVG 406
Query: 482 LCDMYAKAGRFD 493
L + +G D
Sbjct: 407 LLSACSHSGMLD 418
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 291/523 (55%), Gaps = 47/523 (8%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
CKN+R L +IH IKS + T+ + I +L+ CA+S+S +L YA + D +
Sbjct: 182 CKNLRALTQIHGFFIKS-GVDTDSY--FIGKLILHCAISISDALPYARRLLLCFPEPDAF 238
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRLDGLVG 156
+N ++R SE+++ H+ + ++ +M+ G I PD +F F++K G
Sbjct: 239 MFNTLVRG----YSESDEPHNS--VAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTG 292
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA-------- 208
++ Q +K G+ +FV ++I ++ CG V AR +FDEM ++V+WNA
Sbjct: 293 FQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRG 352
Query: 209 -----------------------MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
M+ GY+++G+L+ A +F M R+ SW+++I GF
Sbjct: 353 NDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFS 412
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
G E+ F+E+ + ++P+++++ VLSAC+ GA + GK +HG++ +SG
Sbjct: 413 HNGSFNESFSYFREL----LRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYS 468
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL-AWTAMISVFALNGYGKEAFDTFRE 364
V + AL+DMY +CG V A VF+ M +K ++ +WT+MI+ A++G+G+EA F E
Sbjct: 469 WIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNE 528
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
M GV P+ ++F+ LL AC+H+GL+++G F M+ VY +EP V HY CM+D+ R+G
Sbjct: 529 MTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSG 588
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
+A I MP+ P VW LLG C HGN+EL E+V Q L +LDP N V L +
Sbjct: 589 KLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSN 648
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFS 527
+YA AG++ DV R M + I+K + S VEV +++F+
Sbjct: 649 VYATAGKWKDVASIRKSMIVQRIKK-ITAWSLVEVGKTMYKFT 690
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 275/483 (56%), Gaps = 19/483 (3%)
Query: 78 SGSLSYATNVFSHIKR--SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT-GIS 134
+G++ A +F ++ D ++N MI S ++ + L +++ +L GI
Sbjct: 221 NGNVEKAKELFDQMELVGKDTISWNSMI------SGYADNLLFDEALSMFRDLLMEEGIE 274
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
D T +L C G V+ Q V G+ + FV +++ ++ C + +A++
Sbjct: 275 ADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLA 334
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK----KRNIFSWNSIITGFVQGGRA 250
FD ++ RD +WN +I GY L+ +L ++MK + N+++WN II+G V+ G
Sbjct: 335 FDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHN 394
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
AL LF EMQ+SS+ +PD T+ +L ACA L I GK VH + R G + DV I
Sbjct: 395 ELALRLFTEMQTSSL----RPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHI 450
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
G ALVDMY KCG ++ A V+ + + ++ AM++ +A++G+G E FR M G
Sbjct: 451 GAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGF 510
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
RP+HVTF+ +LS+C H+G VE G F +M + Y V P + HY C++D+LSRAG EA
Sbjct: 511 RPDHVTFLSVLSSCVHAGAVETGHEFFDLMTY-YNVTPSLKHYTCIVDLLSRAGRLDEAY 569
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
L++ +P +PD +WGALLGGC + GNVELGE A+ LI+L+P N YV L ++YA AG
Sbjct: 570 ELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAG 629
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
R+ D+ +TR ++K+RG+ K PGCS +E +H F E++ L+ L+ M
Sbjct: 630 RWHDLDRTRQMIKDRGMHKS-PGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLNTHM 688
Query: 551 KNG 553
+ G
Sbjct: 689 RTG 691
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 178/448 (39%), Gaps = 119/448 (26%)
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D T+ LL+ C + L+ +G V+ +K G FV+ ++ ++ G + A ++F
Sbjct: 61 DSSTYASLLESC-RTLN--LGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVF 117
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK------------------------- 230
+M R++ SW A++ ++ G + AL LF +++
Sbjct: 118 VKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLE 177
Query: 231 ----------KR-----------------NIFSWNSIITGFVQGGRAREALELFQEMQSS 263
KR N+ S+N++I G+ + G +A ELF +M+
Sbjct: 178 LGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELV 237
Query: 264 S------------------------------VEEMVKPDKITIASVLSACAYLGAIDHGK 293
+EE ++ D T+ SVL+ACA + ++ GK
Sbjct: 238 GKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGK 297
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG 353
VH GL + +G ALV+MY KC ++ A F + ++DT W +IS +A
Sbjct: 298 EVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCN 357
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
+ + ++M+ +G PN T+ G++ SG VE G +
Sbjct: 358 QLENIQNLIQKMKGDGFEPNVYTWNGII-----SGHVENGHNELALR------------- 399
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD- 472
LF+E +++ + PD++ G +L C + G++V + I
Sbjct: 400 -----------LFTE----MQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGY 444
Query: 473 PLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
L+ L DMYAK G + N
Sbjct: 445 ELDVHIGAALVDMYAKCGSIKHAMQVYN 472
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 293/531 (55%), Gaps = 19/531 (3%)
Query: 18 KVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL-FFCALS 76
K +P +T ++L+ C N +E+++IH Q I S L + RLL + ++S
Sbjct: 19 KRTPARMPATVILLQM----CHNFQEVRQIHAQFIVSGLLARPPNAG---RLLDSYVSMS 71
Query: 77 VSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPD 136
+ YA VF+ I D++ YN MIR + + LY ++L G++PD
Sbjct: 72 ---QIYYALLVFNRIPSPDVFAYNAMIRGLTLGNCPYDSL------LLYNKLLLGGLTPD 122
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
T+ F+LK C+ G V+ QV+K GV D + S+I ++ + A +
Sbjct: 123 NYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPDTHIHTSLIHMYAKSDCLACAEGVLA 182
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
E S +V++ N+MI GY+ G ++ A +F +M ++ +W+ +ITG+ + G EAL +
Sbjct: 183 ECSQENVLAINSMISGYMSQGHVEKARAMFDKMGAKDAATWSGMITGYTKNGMHEEALVM 242
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F+EM S V+P++ + S LSA A LGA+D G+W+H Y+RR G + +GT LVD
Sbjct: 243 FREMMMVS-NSGVQPNESALVSSLSATACLGALDQGRWIHAYIRRIGAKISITLGTGLVD 301
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG + +Y +F+EM ++D + W M+S FA++G ++ F F EM A G RPN V
Sbjct: 302 MYAKCGSIHCSYKLFREMQQRDVVTWGVMMSGFAMHGQARKCFQLFDEMVAGGTRPNEVI 361
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FV +LSAC+H+G +E G F M + + P V HY CM+D+L RAG +EAE LI SM
Sbjct: 362 FVAILSACSHAGYLELGHHYFNQMVTDFGIRPSVEHYGCMVDLLGRAGQLAEAEELIISM 421
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
P EP +WGALL C++H ++ G + + L+ L+PL Y M++ AG ++
Sbjct: 422 PEEPTAVIWGALLSACRIHKDLRRGRRAFRQLMQLEPLRGDRYKLAGQMFSSAGEKEEAD 481
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
+KE + + G S +E++GVVHEF + + E+ + G++
Sbjct: 482 NVTRFIKENEL-ETTRGSSFIEINGVVHEFVVGDADHHKAREMYRMWEGIN 531
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 287/531 (54%), Gaps = 52/531 (9%)
Query: 7 MVSYSLLNSPAKVSPPNKESTKLI------LRNAIDECKNMRELKEIHTQIIKSPC-LQT 59
M S L +P+ + P ++ L + C ++R L ++H +K+ LQ
Sbjct: 1 MSSSPLTATPSPLLPAKSKNPPPHHHHHNPLLAYLPHCTSLRALAQLHAVAVKAGGGLQA 60
Query: 60 NDHHSLITRLLFFC---ALSVSGSLSYATNVFSHIKRS-DLYTYNIMIRANACKSSETND 115
H + +TRLL C L+YA VF I D+ YN ++R A
Sbjct: 61 --HPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLRGYA--RGGWGG 116
Query: 116 THSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ 175
+ + +++ +M+ G++PD TF LLK C G G +G VK G + +V
Sbjct: 117 GCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVA 176
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
++I+++ CG V +AR++FD M VVS+NAMI +RS AL LFR M+ + +
Sbjct: 177 PTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGL- 235
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
KP +T+ SVLSACA LGA++ G+W+
Sbjct: 236 ----------------------------------KPTSVTLISVLSACALLGALELGRWI 261
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H Y+R+ LD V + TAL+DMY KCG +E A GVF++M +D AW+ M+ +A +GYG
Sbjct: 262 HDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYG 321
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+EA F EM+ +G++P+ VTF+G+L AC+HSG+V +G F MR Y + + HY C
Sbjct: 322 REAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVSGIKHYGC 380
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
+ D+L+R+G A + I +P++P +W LL C HG+V++G++V + +++LD +
Sbjct: 381 VTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSH 440
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV ++ A GR++++ R LM E+G+ K VPGCSS+E+D +VHEF
Sbjct: 441 GGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVK-VPGCSSIEIDNMVHEF 490
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 188/487 (38%), Positives = 278/487 (57%), Gaps = 49/487 (10%)
Query: 44 LKEIHTQIIKSPCLQTNDHHSLITRLL-FFCALSVSGSLSYATNVFSHIKRSDLYTYNIM 102
L ++H II S ++ SL+T+LL CA +GS+SY +F + D + + +
Sbjct: 28 LHQVHAHIIVSGYGRSR---SLLTKLLNLACA---AGSISYTRQIFLAVPNPDSFLFTSL 81
Query: 103 IRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
I KS+ + S L Y +M+ + +SP TF ++K C G V+G
Sbjct: 82 I-----KSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGH 136
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
V+ G DV+VQ ++++L+ CG DL A
Sbjct: 137 VLVHGFGLDVYVQAALVALYGKCG-------------------------------DLINA 165
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
+F ++++R+I +WNS+I+G+ Q G A+EA+ LF M+ + VE PD T SVLSA
Sbjct: 166 RKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVE----PDSATFVSVLSA 221
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
CA+LGA G WVH Y+ +GLD +VV+GT+L++MY +CG V +A VF M +++ +AW
Sbjct: 222 CAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAW 281
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
TAMIS + NGYG +A + F EM G+ PN +TFV +LSACAH+GLV +GR F +R
Sbjct: 282 TAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIRE 341
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIR-SMPMEPDVFVWGALLGGCQMHGNVELG 461
Y + P V H C++D+L RAGL EA I+ +P P + A+LG C+MH N +LG
Sbjct: 342 EYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLG 401
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
+VA++L+ +P N A YV L ++YA AGR D V+ RN M + ++K+V G S+VEVD
Sbjct: 402 AQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQV-GYSTVEVDQ 460
Query: 522 VVHEFSM 528
+ FSM
Sbjct: 461 KTYLFSM 467
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 145/333 (43%), Gaps = 51/333 (15%)
Query: 17 AKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS 76
+ VSP N T +I C ++ LK H +++ L + +
Sbjct: 105 SNVSPSNYTFTSVI-----KSCADLSALK--HGRVVHGHVLVHGFGLDVYVQAALVALYG 157
Query: 77 VSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPD 136
G L A VF I+ + +N MI S + + + + L+ +M TG+ PD
Sbjct: 158 KCGDLINARKVFDKIRERSIVAWNSMI------SGYEQNGFAKEAIGLFDRMKETGVEPD 211
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
TF +L C +G V+ +V G+ +V + S+I++++ CG V+ AR +FD
Sbjct: 212 SATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFD 271
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
M R+VV+W AMI GY +G A++LF M++ +F
Sbjct: 272 SMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLF--------------------- 310
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALV 315
P+ IT +VLSACA+ G ++ G+ + +R L V LV
Sbjct: 311 --------------PNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLV 356
Query: 316 DMYGKCGCVERAYGVFK-EMPKKDTLA-WTAMI 346
DM G+ G ++ AY K E+P+ A TAM+
Sbjct: 357 DMLGRAGLLDEAYNFIKEEIPENPAPAILTAML 389
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 183/486 (37%), Positives = 271/486 (55%), Gaps = 51/486 (10%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
S + LLF A++V G++++A VF I R D + YN +IR A ++ + +
Sbjct: 11 SELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRD------AVS 64
Query: 124 LYKQMLCTG----ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
LY +ML G + PD LTFPF+L+ CT G G V+ VVK G D FV+N++I
Sbjct: 65 LYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALI 124
Query: 180 SLFMACGF-------------------------------VTSARMLFDEMSNRDVVSWNA 208
+ +CG + +AR LFDE +D+VSWN
Sbjct: 125 GMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNV 184
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
MI Y + GD+ +A +LF ++ +R++ SWN +I+G+V+ G ALELF++MQ
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMG---- 240
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYL----RRSGLDCDVVIGTALVDMYGKCGCV 324
KPD +T+ S+LSACA G +D G+ +H L R+G VV+G AL+DMY KCG +
Sbjct: 241 EKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGF--PVVLGNALIDMYAKCGSM 298
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
+ A+ VF M KD W +++ AL+G+ E+ D F +M VRP+ +TFV +L AC
Sbjct: 299 KSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIAC 358
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+H G+V+KGR F +M+H Y VEP++ HY CM+D+L RAGL EA I +M EP+ +
Sbjct: 359 SHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVI 418
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
W LL C++HG +EL + + L+ YV L ++YA G + +K R LM +
Sbjct: 419 WRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDD 478
Query: 505 RGIRKE 510
G+ KE
Sbjct: 479 SGVNKE 484
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 287/499 (57%), Gaps = 21/499 (4%)
Query: 63 HSLITRLLFFCALSVSGSL----------SYATNVFSHIKRSDLYTYNIMIRANACKSSE 112
H+ + R F C+ VSG+L VF +++ L + ++IRA C
Sbjct: 114 HASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCV--- 170
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDV 172
T K L+L++ M G++PD + ++ C D V +++ + K G+ D
Sbjct: 171 ---TFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDA 227
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
FV +++IS + CG + A F E +++V WN MI + +L++ LF+ M R
Sbjct: 228 FVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDR 287
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
++ SWNS+I GF + G+ +EAL F EM+ S V P+ +T+ S LSACA GA+D G
Sbjct: 288 DVVSWNSMIGGFARIGQYQEALTWFHEMEFSGV----SPNALTLLSTLSACASHGALDTG 343
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
W+H Y+ ++ ++ D + ++L+DMY KCG +++A +F+E ++D WT+++ A++
Sbjct: 344 AWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMH 403
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
G G++A F +M+ V+P+ VT VG+LSACAH+GL+++G W F M V+ + P V H
Sbjct: 404 GRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEH 463
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
Y CM+D+L R G EA LI MPME + +WGA L C++H NVELGE A+ L+ LD
Sbjct: 464 YGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLD 523
Query: 473 PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSP 532
P + V L +MYA+ ++D R +K++G++K PGCSS+EV+G VH F + +
Sbjct: 524 PRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKS-PGCSSIEVNGSVHGFLVGDNS 582
Query: 533 KVVKEELVLILNGLSKIMK 551
E+ ++ + K+M+
Sbjct: 583 HPCYTEINSMVEKIEKLMR 601
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 180/415 (43%), Gaps = 83/415 (20%)
Query: 89 SHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECT 148
S + ++++ +N MIR T D L Y Q L G+ P+ TF +LLK
Sbjct: 47 SRLDCANVFVWNTMIRKQVENGLITRDPP----LLYYMQGLRAGLRPNGHTFMYLLKALV 102
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+ G V+ VV+ G FV +++ ++ACG V R +FDEM +V W
Sbjct: 103 SGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTL 162
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+I Y+ + AL+LFR M+ E
Sbjct: 163 IIRAYVCVTFPEKALELFRTMR-----------------------------------EVG 187
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
+ PD + I++V+SAC LG + K +H ++ +SG++ D + + L+ YG+CG ++ AY
Sbjct: 188 LTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAY 247
Query: 329 GVFKE-------------------------------MPKKDTLAWTAMISVFALNGYGKE 357
F+E MP +D ++W +MI FA G +E
Sbjct: 248 RFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQE 307
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH----Y 413
A F EME GV PN +T + LSACA G ++ G W H Y+ + +
Sbjct: 308 ALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWI-----HAYVDKNDMNRDGSLD 362
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ +ID+ S+ G +A ++ D+F W +++ G MHG GEK Y
Sbjct: 363 SSLIDMYSKCGDIDKAVQIFEE-STRRDLFTWTSIVCGLAMHGR---GEKALHYF 413
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/537 (35%), Positives = 293/537 (54%), Gaps = 56/537 (10%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSP--CLQTNDHHSLITRLL-FFCALSVS 78
P+ + L+L+ ++ L ++H +I S C + L+T+LL CA +
Sbjct: 10 PHSPAYNLLLQAG----PRLKLLHQVHAHVIVSGYGCSRF-----LLTKLLNLACA---A 57
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS+SY +F + D + + +IR S+ S L Y +M+ + ++P
Sbjct: 58 GSISYTRQIFLIVPNPDSFLFTSLIR-----STSKFHNFSVYSLYFYTRMVLSNVAPSNY 112
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF ++K C + G ++G V+ G DV+VQ +++S + CG + +AR +FD
Sbjct: 113 TFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFD-- 170
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+M+ R++ +WNS+I+G+ Q G A+EA+ LF
Sbjct: 171 -----------------------------KMRDRSVVTWNSMISGYEQNGFAKEAIRLFD 201
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M+ VE P+ T SVLSACA+LGA G WVH Y +GLD +VV+GT+L++MY
Sbjct: 202 RMKEIGVE----PNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMY 257
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
+CG V +A VF M +++ +AWTAMIS + NGYG +A + F EM G+ PN +TFV
Sbjct: 258 TRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFV 317
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+LSACAH+GLV +GR F MR Y + P V H+ C++D+L RAGL EA I+ +
Sbjct: 318 AVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHE 377
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EP +W A+LG C+MH N LG +VA++ + +P N A YV L ++YA AGR D V+
Sbjct: 378 EPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMDQVEMV 437
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R+ M + ++K+V G S++++D + FSM E+ L+ L + + G+
Sbjct: 438 RDNMIRKCLKKQV-GYSTIDLDRKTYLFSMGDKSHTETNEIYHYLDQLMRKCREAGY 493
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 285/528 (53%), Gaps = 48/528 (9%)
Query: 2 SKKLQMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTND 61
S L LL + K PP + + + + C ++R L ++H +K+
Sbjct: 3 SAPLTATPAPLLPAKPKSPPPQQHP----VLSHLPHCTSLRTLAQLHAAAVKA---GLAA 55
Query: 62 HHSLITRLLFFCALSVSGS--LSYATNVFSHIKR-SDLYTYNIMIRANACKSSETNDTHS 118
H +L+TRLL C +G L+YA VF + +D YN ++R A +SS + + +
Sbjct: 56 HPALVTRLLTLCTGPDAGPAHLAYARQVFDRVPHPADAVWYNTLLRGYA-RSSNPSSSEA 114
Query: 119 GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSV 178
++++ +ML G++PD TF LLK C G G + VK G D +V+ ++
Sbjct: 115 AAAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTL 174
Query: 179 ISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWN 238
I+++ CG +AR++F VVS+ N
Sbjct: 175 INMYAECGDARAARVMFGGTDGGCVVSY-------------------------------N 203
Query: 239 SIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY 298
++I V+ R EAL LF+EMQ + KP +T+ SVLSACA LGA++ G+WVH Y
Sbjct: 204 AMIAAAVRSSRPGEALVLFREMQGKGL----KPTSVTVISVLSACALLGALELGRWVHDY 259
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
+R+ GL V + TAL+DMY KCG +E A VF+ M KD AW+ MI +A +GYG+EA
Sbjct: 260 VRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREA 319
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F EM+ EG++P+ +TF+G+L AC+HSGLV +G F M+ +V P + HY C+ D
Sbjct: 320 ISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKDHGIV-PGIKHYGCVTD 378
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+L+R+G A + I +P+ P +W LL C HG+ ELG++V + ++ LD +
Sbjct: 379 LLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSHGGD 438
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV ++ A G ++++ R LM E+G+ K VPGCSS+E+D VHEF
Sbjct: 439 YVIFSNLCANTGYWEEMNMVRKLMSEKGVVK-VPGCSSIEIDNTVHEF 485
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/494 (37%), Positives = 272/494 (55%), Gaps = 30/494 (6%)
Query: 47 IHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRAN 106
IH + K L H L T LL A + G +A ++F + L T M RA+
Sbjct: 33 IHGLLFKEGLLHAGSH--LPTALL--SAYAALGRPRHARDLFDEMPDPGLVTRTAMARAH 88
Query: 107 ACKSSETNDTHSGKCLKLYKQMLCTGISPDCL-------------TFPFLLKECTKRLDG 153
A + + L ++ ML G+ PD + +FP L R G
Sbjct: 89 AASG------QTAQALAVFGDMLADGVLPDNVALAVALAACHGTGSFPAALGMAAARRPG 142
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
+ V+ +V G+ DVFV +I L+ G + +R LFD M + VSWNAM+ Y
Sbjct: 143 KM---VHALIVTSGIVPDVFVSTELIRLYGEYGELLVSRRLFDAMPVKSTVSWNAMVHQY 199
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
+R ++ A +LF M KR++ SWN+II G+ GR EALELF++M S S V P+
Sbjct: 200 IRHSNVGDAYELFLAMPKRDVVSWNTIIAGYCLIGRFMEALELFRQMMSPSSCP-VHPNG 258
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
TI++VL+ACA G ++ G WVH Y+ R+ ++ D + +L+DMY KCG +E+A VF++
Sbjct: 259 PTISTVLAACAGAGCLETGIWVHAYIDRNRMNDDGSLDRSLIDMYAKCGSIEKALQVFEK 318
Query: 334 MP-KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
P K+D +WT +I A++G +A F M+ G+RP+ VT VG+L+ACAH GLV++
Sbjct: 319 APGKRDLYSWTTVICGLAMHGKAADALRMFGMMQDNGIRPDDVTLVGVLNACAHGGLVDE 378
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G F + Y + P + HY C+ID+L R G EA +IR+M M+P+ +WGA L C
Sbjct: 379 GLHHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYSIIRTMRMKPNAVIWGAFLNAC 437
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
++H NVELGE A L LDP + V L +YAKA + + + R M ++K P
Sbjct: 438 KVHSNVELGEIAAAELTRLDPDDPWAKVMLSSLYAKAQDWSSLARERREMNSLQMKK-TP 496
Query: 513 GCSSVEVDGVVHEF 526
GCSS+E+DG VHEF
Sbjct: 497 GCSSIELDGEVHEF 510
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/472 (38%), Positives = 265/472 (56%), Gaps = 12/472 (2%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
L A +F + + + +++ MI A C+S + + L+L+ +M+ G P+ F
Sbjct: 266 LGEARRIFDEMPQRNEVSWSAMI-ARYCQSG-----YPEESLRLFCRMIQEGFKPNISCF 319
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
+L G +++G V K G DVFV +S+I ++ CG R LFD +
Sbjct: 320 SSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILE 379
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
+++VSWNAM+ GY +G ++ A LF M RN SW++II G + + E E+F EM
Sbjct: 380 KNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEM 439
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
+ P+K T +S+L ACA ++D GK +HG + + G+ CD +GTAL DMY K
Sbjct: 440 ----ILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAK 495
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME-AEGVRPNHVTFVG 379
G +E + VF MPKK+ ++WTAMI A +G +E+ F EME + PN V F+
Sbjct: 496 SGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLA 555
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+L AC+HSGLV+KG W F M VY ++P H+ C++D+LSRAG EAE I SMP +
Sbjct: 556 VLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQ 615
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
P+ W ALL GC+ + N EL E+VA L ++ N A YV L ++YA AGR+ DV K R
Sbjct: 616 PETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVR 675
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
LMK +G++K GCS VE+ VH F + E+ IL L MK
Sbjct: 676 KLMKAKGLKKS-GGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEMK 726
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 194/374 (51%), Gaps = 39/374 (10%)
Query: 118 SGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS 177
S + +KL+ ++L + + P+ +TF +++ C D +G SV G +VK G D+ V NS
Sbjct: 165 SVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNS 224
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
+I+L + G + AR +FD M +DVVSW A++ Y+ +L A +F M +RN SW
Sbjct: 225 LITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSW 284
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
+++I + Q G E+L LF M ++E KP+ +S+LSA A + A+ G +HG
Sbjct: 285 SAMIARYCQSGYPEESLRLFCRM----IQEGFKPNISCFSSILSALASVEALQAGMNIHG 340
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
++ + G + DV + ++L+DMY KCG + +F + +K+ ++W AM+ ++LNG+ +E
Sbjct: 341 HVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEE 400
Query: 358 A-------------------------------FDTFREMEAEGVRPNHVTFVGLLSACAH 386
A F+ F EM G PN TF LL ACA
Sbjct: 401 AKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACAS 460
Query: 387 SGLVEKGRWCFVMMRHVYL-VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
+ ++KG+ + + V L ++ Y + D+ +++G ++++ MP + +V W
Sbjct: 461 TASLDKGK--NLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEV-SW 517
Query: 446 GALLGGCQMHGNVE 459
A++ G G E
Sbjct: 518 TAMIQGLAESGLAE 531
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 195/380 (51%), Gaps = 49/380 (12%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D+ V N +IS + G + AR LFDEM + +SW A+I G+++ G + ++ F R
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNP 145
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+N+ SW + I+G+VQ G + EA++LF ++ +E VKP+K+T SV+ ACA LG
Sbjct: 146 FQNVVSWTAAISGYVQNGFSVEAMKLFIKL----LESEVKPNKVTFTSVVRACANLGDFG 201
Query: 291 HGKWVHGYLRRSGLD------------C-------------------DVVIGTALVDMYG 319
G V G + ++G + C DVV TA++D+Y
Sbjct: 202 LGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYV 261
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
+ + A +F EMP+++ ++W+AMI+ + +GY +E+ F M EG +PN F
Sbjct: 262 EMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSS 321
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLV--EPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+LSA A ++ G + HV + E V+ + +ID+ + G + L ++
Sbjct: 322 ILSALASVEALQAG---MNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTI- 377
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL-NHAFYVNLCDMYAKAGRFDDVK 496
+E ++ W A++GG ++G++E A+YL ++ P+ N+ + + + +FD++
Sbjct: 378 LEKNMVSWNAMVGGYSLNGHME----EAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMF 433
Query: 497 KTRNLMKERGIRKEVPGCSS 516
+ N M G E+P S+
Sbjct: 434 EVFNEMILLG---EIPNKST 450
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 264/441 (59%), Gaps = 11/441 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L+ A VF + D+ ++N +I C + N K L L+++M + D +
Sbjct: 121 GELAMAQKVFDGMLERDVVSWNSII----CGYYQFN--RFKKVLDLFREMQAINVRADSV 174
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T + + +G + + + GV D+++ N++I ++ G + A +F +M
Sbjct: 175 TMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQM 234
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+++VSWNAMI+GY + G+L A LF M R++ SW S+I G+ + EA++LFQ
Sbjct: 235 KEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQ 294
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM S MVKPD+IT+A+ LSACA+LG++D G+ VH Y+R+ + DV +G +L+DMY
Sbjct: 295 EMMVS----MVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMY 350
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG VE+A VF +M +D+++WT++IS A+NG+ + A + F +M EG+ P H TFV
Sbjct: 351 CKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFV 410
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L ACAH GLV+KG F M + Y + P + HY C++D+L R+G A I+ MP+
Sbjct: 411 GVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPI 470
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
PDV +W LL C++HGN+ L E V++ L+ LDP N+ YV YA + R+DDV K
Sbjct: 471 VPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKI 530
Query: 499 RNLMKERGIRKEVPGCSSVEV 519
R LM+ ++K SS+EV
Sbjct: 531 RKLMEVTNLQKPC-AYSSIEV 550
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 191/427 (44%), Gaps = 75/427 (17%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
S I+ ++ ALS SL A VF+ I+R L +N MI KS ND +
Sbjct: 6 SSISEVIKHYALS-PQSLPKAHFVFNQIQRPTLLVWNHMIHG-LSKSDRPNDA-----IH 58
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
Y M GI LTF FL K C + D G V +K G FV N++I +++
Sbjct: 59 FYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYV 118
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
G + A+ +FD M RDVVSWN++I GY + F R KK
Sbjct: 119 CFGELAMAQKVFDGMLERDVVSWNSIICGYYQ----------FNRFKK------------ 156
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
L+LF+EMQ+ + V+ D +T+ +SA +L + G ++ Y+ G
Sbjct: 157 ---------VLDLFREMQAIN----VRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHG 203
Query: 304 LDCDVVIGTALVDMYGKCGCVE-------------------------------RAYGVFK 332
+ D+ +G L+DMYG+ G ++ A +F
Sbjct: 204 VVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFN 263
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
EMP +D ++WT+MI ++L EA F+EM V+P+ +T LSACAH G ++
Sbjct: 264 EMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDA 323
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G +R + ++ V+ +ID+ + G+ +A ++ M D W +++ G
Sbjct: 324 GEAVHDYIRK-HDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTR-DSVSWTSIISGL 381
Query: 453 QMHGNVE 459
++G E
Sbjct: 382 AVNGFAE 388
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 262/442 (59%), Gaps = 13/442 (2%)
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL--VGASVYGQVVKFGV-C 169
+ D + ++ + M GI P+ +TF LL C G +G ++G K G+
Sbjct: 32 SRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGLGYLLHGYACKLGLER 91
Query: 170 DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
V V +++ ++ G + AR++FD + +++ V+WN MI GY+R+G +D A+D+F +M
Sbjct: 92 SHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNGQVDNAVDVFDKM 151
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
R++ SW ++ITGFV+ G EAL F+EMQ S V PD + I S ++AC LGA+
Sbjct: 152 PDRDLISWTAMITGFVKKGFHEEALAWFREMQISGV----NPDYVAIISAVAACTNLGAL 207
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
G WVH Y+ +V + +L+D+Y +CGCVE A VF +M K+ ++W ++I F
Sbjct: 208 SFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGF 267
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A NG E+ FR+M+ EG P+ VTF G L+AC+H GLVE+G F MM+H Y + P
Sbjct: 268 AANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPR 327
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN-VELGEKVAQYL 468
+ HY C++D+ SRAG +A ++ SMPM+P+ V G+LL C+ HGN L E++ +Y+
Sbjct: 328 IEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKYI 387
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM 528
DLD +H+ YV L +MYA G+++ K R MK G++K+ PG SS+E+D H F
Sbjct: 388 TDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQ-PGYSSIEIDDCTHVFMA 446
Query: 529 KGSPKV----VKEELVLILNGL 546
S V ++E L LI + L
Sbjct: 447 GDSAHVETAYIREVLELISSDL 468
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++WT+ I++ + +G EA F +M G+ PNH+TF+ LLSAC G G
Sbjct: 22 VSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSAC---GNFPSGSEGLGY 78
Query: 400 MRHVY-----LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
+ H Y L HV ++ + S++G +A RL+ + + W ++ G
Sbjct: 79 LLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKA-RLVFDYIEDKNSVTWNTMIDGYMR 137
Query: 455 HGNVELGEKVAQYLIDLD 472
+G V+ V + D D
Sbjct: 138 NGQVDNAVDVFDKMPDRD 155
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/486 (36%), Positives = 289/486 (59%), Gaps = 20/486 (4%)
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRA--NACKSSETNDTHSGKCLKLYKQMLCTG 132
L+ G LS A + + D+ ++ +I A A ++ E D +K ML G
Sbjct: 184 LAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDC--------FKNMLSEG 235
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
I+PD +T +L C++ D +G S++ V + G+ + ++I ++ CG AR
Sbjct: 236 IAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAR 295
Query: 193 MLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
+FD + R SWNA+I GY + G +DVA LF +M+ R+I ++NS+ITG++ G+ R
Sbjct: 296 EVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLR 355
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EAL LF M+ + + D T+ S+LSACA LGA+ G+ +H + ++ D+ IG
Sbjct: 356 EALLLFMNMRRHDL----RVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIG 411
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
TAL+DMY KCG V A VF+ M K+D AWTAMI+ A NG GK + F +M +G +
Sbjct: 412 TALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQ 471
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
PN V+++ +L+AC+HS L+ +GR F MR +Y + P + HY CMID+L R+GL EA
Sbjct: 472 PNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMD 531
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
L+++MPM+P+ +W ++L C++H ++L + A++L+ ++P A YV L ++ + +
Sbjct: 532 LVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRK 591
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF--SMKGSPKVVKEELVLILNGLSKI 549
++D K R LM+ER ++K G SSV V G VH+F S K P+++ E++ +L +S
Sbjct: 592 WEDASKIRMLMEERQVKKTA-GYSSVTVAGQVHKFVVSDKSHPRIL--EIIAMLEEISHR 648
Query: 550 MKNGGF 555
+K+ G+
Sbjct: 649 LKSAGY 654
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 208/453 (45%), Gaps = 44/453 (9%)
Query: 39 KNMRELKEIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
+ +R+ E+H + S L H L+ L+ S L YA ++F + S +
Sbjct: 10 RTVRQAAELHAHLTTSGRLLHPPSAHHLLNSLVNCLPPSDPLHLRYALHLFDRMPAST-F 68
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK-ECTKRLDGLVG 156
++ +RA C + T+ L+++M + PD TF FL K + R L+
Sbjct: 69 LFDTALRA--CFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLC 126
Query: 157 ASVYGQVVKFGVCDDV-FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
++ ++ + FV NS+I ++ G R FDE+ +D VSW +I G +
Sbjct: 127 TMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAK 186
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
G L A L + R++ SW S+I + + RA+EA++ F+ M S E + PD +T
Sbjct: 187 MGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLS----EGIAPDDVT 242
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG------------- 322
+ VLSAC+ L ++ G +H ++ G+ + AL+DMY KCG
Sbjct: 243 VIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVG 302
Query: 323 ---------------C----VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
C V+ A +F +M +D + + +MI+ + +G +EA F
Sbjct: 303 RGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFM 362
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
M +R ++ T V LLSACA G + +GR + + LVE +Y ++D+ +
Sbjct: 363 NMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIE-LRLVETDIYIGTALLDMYMKC 421
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
G +EA + + M + DV W A++ G +G
Sbjct: 422 GRVNEATIVFQRMG-KRDVHAWTAMIAGLAFNG 453
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 194/421 (46%), Gaps = 40/421 (9%)
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
+I N+ S + H + + KQML G P +F LL K D +G ++G
Sbjct: 962 VISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHG 1021
Query: 162 QVVKFGV-CDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
V K G C V VQ ++I ++ C + +F+E+ + + N++I LR D
Sbjct: 1022 IVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFD 1081
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
AL++ M + E V PD +T ++ +
Sbjct: 1082 AALEILHCM-----------------------------------IVEGVTPDDVTFSATM 1106
Query: 281 SACAYLGA--IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
A + + + + +H L + G + D+ + ++L+ Y G + ++ +F+ + +
Sbjct: 1107 KAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPN 1166
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
+ +TA+IS A G G A + F +M + G++P++VTF+ ++ C +G+ E+GR
Sbjct: 1167 VICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIE 1226
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+MR ++P H+ACM+++LSR G EA ++ P+ W +LL C+ HG
Sbjct: 1227 LMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGEN 1286
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
LG++ A LID+ + A + + + + G + + + + + ++K G S +E
Sbjct: 1287 VLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKKS--GHSLIE 1344
Query: 519 V 519
V
Sbjct: 1345 V 1345
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 109/227 (48%), Gaps = 20/227 (8%)
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
M R++ S N +ITGF++ G A A +++ M +S + E T +++L C+ A
Sbjct: 757 MAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPH----TFSTILGVCSTYEA 812
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
+ +HG + GL C+ +G+ALV+ Y + +F+E+P ++ TAM +V
Sbjct: 813 LQ----LHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQN----TAMCNV 864
Query: 349 FALNGYG-----KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG-LVEKGRWCFVMMRH 402
L G G +E F +M + + N +++ + C +G +E+GR ++
Sbjct: 865 -VLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLK 923
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
+ +++ ++D+ S G + + + + + DV W ++L
Sbjct: 924 AGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDI-LSEDVISWNSIL 969
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 138/325 (42%), Gaps = 41/325 (12%)
Query: 115 DTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV 174
D + + +Y+ M+ +GI TF +L C+ ++G+V+ G+C + FV
Sbjct: 775 DGLADRARAVYRWMVASGIRETPHTFSTILGVCST----YEALQLHGRVLALGLCCNPFV 830
Query: 175 QNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
+++++ +M V S +A +L LFR + +N
Sbjct: 831 GSALVNHYM------------------HVESPHA-------------SLSLFRELPLQNT 859
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA-IDHGK 293
N ++ G E + F +M+ +E + ++ + C G ++ G+
Sbjct: 860 AMCNVVLRGLGNLKLTEELICCFLDMRRQYLEL----NGLSYCYAMKGCYQNGEWLEQGR 915
Query: 294 WVHGYLRRSG-LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+HG + ++G + ++ + +LVD+Y G ++ +D ++W +++S++A
Sbjct: 916 QLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADR 975
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
G+ KEA ++M G P+ +FV LL+ +G + G ++ + V+
Sbjct: 976 GHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHV 1035
Query: 413 YACMIDILSRAGLFSEAERLIRSMP 437
+ID+ + F + + +P
Sbjct: 1036 QTTLIDMYGKCCCFDHSLAIFNEIP 1060
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/516 (35%), Positives = 295/516 (57%), Gaps = 24/516 (4%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P+ + ++L+ +I + + E +++H +K+ +D + + + + AL G +
Sbjct: 28 PDNFTLPVVLK-SIGRLRKVIEGEKVHGYAVKTGL--ESDSYVCNSLMGMYAAL---GKM 81
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM-LCTGISPDCLTF 140
VF + D+ ++N +I SS + ++++M + + D T
Sbjct: 82 EITHKVFDEMPERDVVSWNGLI------SSYVGHGRFEDAISVFQRMSRESNLKADEGTI 135
Query: 141 PFLLKECTKRLDGLVGASVYGQVV-KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
L C+ + +G +Y VV +F + V N+++ +F CG + AR +FD M
Sbjct: 136 VSTLSACSVLKNLEIGERIYRYVVTEFEM--SVRTGNALVDMFCKCGCLDKARAIFDSMR 193
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+++V W +M+ GY+ +G D A +LF R +++ W +++ G+VQ R EALELF+
Sbjct: 194 DKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRC 253
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
MQ++ + +PD + S+L+ CA GA++ GKW+HGY+R + + D V+GTALVDMY
Sbjct: 254 MQTARI----RPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYA 309
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCGC+E A GVF EM ++DT +WT++I A NG A D + EME GVR + +TFV
Sbjct: 310 KCGCIETALGVFYEMKERDTASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVA 369
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+L+AC+H G V +GR F M + ++P HY+C+ID+L RAGL EAE LI M E
Sbjct: 370 VLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGE 429
Query: 440 PD---VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
D V V+ +LL + +GNV++ E+VA+ L ++ + + + L +YA A R++DV
Sbjct: 430 RDKTLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVT 489
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSP 532
R MK+ GIRK PGCSS+EVDGV HEF + P
Sbjct: 490 NVRRKMKDLGIRK-FPGCSSIEVDGVSHEFIVGNDP 524
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 170/368 (46%), Gaps = 68/368 (18%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
K L L+ ++ G+ PD T P +LK + + G V+G VK G+ D +V NS++
Sbjct: 13 KVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLM 72
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
++ A G + +FDEM RDVVSWN +I Y+ G + A+ +F+RM +
Sbjct: 73 GMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSR-------- 124
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
E +K D+ TI S LSAC+ L ++ G+ ++ Y+
Sbjct: 125 --------------------------ESNLKADEGTIVSTLSACSVLKNLEIGERIYRYV 158
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA--------- 350
+ + V G ALVDM+ KCGC+++A +F M K+ WT+M+S +
Sbjct: 159 -VTEFEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEAR 217
Query: 351 -----------------LNGYGK-----EAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+NGY + EA + FR M+ +RP++ V LL+ CA +G
Sbjct: 218 ELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTG 277
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+E+G+W +R + V A ++D+ ++ G A + M E D W +L
Sbjct: 278 ALEQGKWIHGYIRENRVTVDKVVGTA-LVDMYAKCGCIETALGVFYEMK-ERDTASWTSL 335
Query: 449 LGGCQMHG 456
+ G +G
Sbjct: 336 IYGLATNG 343
>gi|242047514|ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
gi|241924880|gb|EER98024.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
Length = 786
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/400 (41%), Positives = 245/400 (61%), Gaps = 17/400 (4%)
Query: 139 TFPFLLKECTKRLDG-----------LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
+F FLL + LD L+GA V+ VK G D++V+N++I + CG
Sbjct: 121 SFTFLLASLSNHLDADPAVAVSIASRLMGAHVHALAVKAGAAGDLYVRNALIHFYGVCGD 180
Query: 188 VTSARMLFDEMS-NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
V + R +FDE+ RDVV+WNA++ GY+R+G + VA ++F M R+ SW++++ G+V+
Sbjct: 181 VAAMRKVFDELPLVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPMRDEVSWSTVVGGYVK 240
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G AL +F+ M V + VK ++ I + LSA A LG ++ GK+VH ++R+G+
Sbjct: 241 EGELEVALGVFKNM----VVQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVIKRAGVAM 296
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
+ +G ALVDMY KCG V A VF MP +D AW +MI A +G G +A F +
Sbjct: 297 SMNLGAALVDMYSKCGSVAAAKEVFDAMPWRDVFAWNSMICGLATHGLGHDAVQLFEKFV 356
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
+EG P ++TFVG+L+AC+ +GLV++GRW F +M Y +E + HY CM+D+LSRAGL
Sbjct: 357 SEGFCPTNITFVGVLNACSRTGLVDEGRWYFKLMAEKYGIESEMEHYGCMVDLLSRAGLV 416
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
EA LI M + PD +WG +L C+ HG V+LG V LI+LDP + +YV L +Y
Sbjct: 417 QEAIELIEGMHIPPDPVLWGTVLSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIY 476
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
AKA ++D+V+K R LM RG K G S +E G+VH+F
Sbjct: 477 AKAKKWDEVRKVRKLMSNRGTSKSA-GWSLMEAHGIVHKF 515
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/498 (35%), Positives = 270/498 (54%), Gaps = 44/498 (8%)
Query: 60 NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
+ H +++ + G + A N+F I D+ ++N MI S +
Sbjct: 124 SSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMI------SGYVETGNYK 177
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L+L+K+M+ T + PD T ++ + +G V+ + G ++ + N++I
Sbjct: 178 EALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALI 237
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
+ CG +++ A LF + +++ SWN
Sbjct: 238 DFYSKCG-------------------------------EMETACGLFLGLSYKDVISWNI 266
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I G+ +EAL LFQEM S P+ +T+ S+L ACA+LGAID G+W+H Y+
Sbjct: 267 LIGGYTHLNLYKEALLLFQEMLRSGE----SPNDVTMLSILHACAHLGAIDIGRWIHVYI 322
Query: 300 --RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
R G+ + T+L+DMY KCG +E A+ VF M K AW AMI FA++G
Sbjct: 323 DKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANA 382
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
AFD F M ++P+ +TFVGLLSAC+H+G+++ GR F M H Y + P + HY CMI
Sbjct: 383 AFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMI 442
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L +GLF EAE +I +M MEPD +W +LL C+MHGNVELGEK AQ L ++P N
Sbjct: 443 DLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPG 502
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKE 537
YV L ++YA AGR+++V + R L+ ++G++K VPGCSS+E+D VVHEF +
Sbjct: 503 SYVLLSNIYATAGRWNEVARIRGLLNDKGMKK-VPGCSSIEIDSVVHEFIIGDKFHPRNR 561
Query: 538 ELVLILNGLSKIMKNGGF 555
E+ +L + +++ GF
Sbjct: 562 EIYGMLEEMEVLLQEAGF 579
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 218/390 (55%), Gaps = 15/390 (3%)
Query: 70 LFFCALSVS-GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM 128
L FC LS L YA +VF I+ +L +N M R +A + LKLY M
Sbjct: 1 LEFCILSPHFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVS------ALKLYVCM 54
Query: 129 LCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFV 188
+ G+ P+ TFPFLLK C K G ++G V+K G D++V S+IS+++ +
Sbjct: 55 ISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERL 114
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
A +FD S+RDVVS+ A++ GY G ++ A ++F + +++ SWN++I+G+V+ G
Sbjct: 115 EDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETG 174
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
+EALELF+EM ++ V+PD+ T+ +V+SA A G+I+ G+ VH ++ G ++
Sbjct: 175 NYKEALELFKEMMKTN----VRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNL 230
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA-LNGYGKEAFDTFREMEA 367
I AL+D Y KCG +E A G+F + KD ++W +I + LN Y KEA F+EM
Sbjct: 231 KIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLY-KEALLLFQEMLR 289
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLF 426
G PN VT + +L ACAH G ++ GRW V + + + V +ID+ S+ G
Sbjct: 290 SGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDI 349
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
A ++ SM + + W A++ G MHG
Sbjct: 350 EAAHQVFNSM-LHKSLPAWNAMIFGFAMHG 378
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/495 (35%), Positives = 276/495 (55%), Gaps = 18/495 (3%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSY 83
+E + ILR + K L EIH ++ Q+N ++ + CA + Y
Sbjct: 5 REIERKILR-LLHGGKTRSHLTEIHGHFLRHGLQQSNQ---ILAHFVSVCA--SLRRVPY 58
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
AT +F+H ++ +N +I+A++ H+ + M ISPD T L
Sbjct: 59 ATRLFAHTHNPNILLFNAIIKAHSLHPP----FHAS--FSFFSLMKTRAISPDEYTLAPL 112
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
K + ++G V+ VV+ G V+ + + ++ +C + A +FDEM + DV
Sbjct: 113 FKSASNLRYYVLGGCVHAHVVRLGFTRHASVRVAALEVYASCERMGDASKVFDEMRDPDV 172
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
V WN MI G+ + GDL+ + +F +MK+R + SWN +++ + + +ALELF EM
Sbjct: 173 VVWNLMIRGFCKMGDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEM--- 229
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV-IGTALVDMYGKCG 322
+E+ +PD ++ +VL CA LGA+D G+W+H Y G D + +G +LVD Y KCG
Sbjct: 230 -LEQGFEPDDASLVTVLPVCARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCG 288
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
++ A+ +F +M K+ ++W AMIS A NG G+ + F EM G PN TFVG+L+
Sbjct: 289 NLQAAWSIFNDMASKNVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLA 348
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
CAH GLV++GR F M + V P + HY C++D+L R G EA LI SMP++P
Sbjct: 349 CCAHVGLVDRGRDLFASMSVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSMPLKPTA 408
Query: 443 FVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
+WGALL C+ +G+ E+ E A+ L+ L+P N YV L ++YA+ GR+D+V+K R LM
Sbjct: 409 ALWGALLSACRTYGDREIAENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLM 468
Query: 503 KERGIRKEVPGCSSV 517
+ G++K VPG S+
Sbjct: 469 RGGGVKK-VPGQSAT 482
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 274/516 (53%), Gaps = 57/516 (11%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C+++R++K++H ++ L + S + L+F A+ V G ++A VF I D +
Sbjct: 18 CRSLRQIKQVHALMVLQGFLSDS---SALRELIFASAVGVRGGTAHARLVFDRIPHPDRF 74
Query: 98 TYNIMIRANACKSSETNDT---------HSGKCLKLYKQMLCTGISPDCLTFPFLLKECT 148
YN +IR A S D HS C + + PD TFPF+L+ C
Sbjct: 75 MYNTLIR-GAAHSDAPRDAVSIYARMARHSADCDLMT-------LRPDKRTFPFVLRACA 126
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL--------------------------- 181
G GA V+ VVK G D FV+N++I +
Sbjct: 127 AMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSA 186
Query: 182 ----FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
F G + +AR LFDE +D+VSWN MI Y + GD+ A +LF R++ SW
Sbjct: 187 MISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSW 246
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N++I+G+V+ G ++A+ELF++MQ+ KPD +T+ S+LSACA G +D G+ +HG
Sbjct: 247 NAMISGYVRCGSRKQAMELFEQMQAMGE----KPDTVTMLSLLSACADSGDLDAGRRLHG 302
Query: 298 YL--RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
+L R S + +G AL+DMY KCG + A VF M K+ W ++I AL+G+
Sbjct: 303 FLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHA 362
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
E+ FR+M V+P+ +TFV +L+AC+H G+V+KG F +M+ Y +EP++ HY C
Sbjct: 363 TESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGC 422
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
M+D+LSR GL EA I +M +EP+ +W LLG C++HG +EL E + L+
Sbjct: 423 MVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDA 482
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
+V L ++YA G + + R LM + G+ KE
Sbjct: 483 SGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEA 518
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/492 (37%), Positives = 275/492 (55%), Gaps = 17/492 (3%)
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
+ A S SG + A N+ + + +L +YN +I S + + L ++K ML
Sbjct: 85 IIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLI------SGLGHHGFRKESLNVFKTML 138
Query: 130 --CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
C+ + D T L+ C + V+G + G+ ++ + N++I + CG
Sbjct: 139 KQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGE 198
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+ +F M RDVVSW +M+ Y ++ L+ A LF +M+++N SW ++I GF Q
Sbjct: 199 PDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQN 258
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG-LD- 305
GR EAL LF++M+ EE + P T ASVLSACA L I GK +HG++ RS +D
Sbjct: 259 GRGDEALHLFEQMR----EEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDY 314
Query: 306 -CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
C++ I AL+DMY KCG + A +FK M +KD ++W ++I+ FA NG+G+E+ F
Sbjct: 315 FCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFER 374
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
M +RPNHVTF+GLLSAC H+GLV +G M Y V P HYA MID+L R
Sbjct: 375 MIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNN 434
Query: 425 LFSEAERLIRSMPMEPD-VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
EA LI+ P D V +WGALLG C++HGN++L + A+ L L+P N A YV +
Sbjct: 435 RLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVY 494
Query: 484 DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLIL 543
++YA A R+D+ ++ R LM ERG+RKE CS +EV H+F K E+ ++
Sbjct: 495 NIYAAASRWDEARQVRRLMMERGLRKEA-ACSWIEVRNTRHQFVAKERSHCQINEVYEVI 553
Query: 544 NGLSKIMKNGGF 555
+ L M + G+
Sbjct: 554 HNLVDQMYDSGY 565
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 188/392 (47%), Gaps = 49/392 (12%)
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
+ + P + L+ +C +G ++ +K + F+ N +I + C + S
Sbjct: 8 SSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQS 67
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
A +F + ++ SWN +I Y RSG + A +L +M K N+ S+NS+I+G G
Sbjct: 68 AHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFR 127
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
+E+L +F+ M + D+ T+ S++ +CA LGA + + VHG GL+ +++I
Sbjct: 128 KESLNVFKTMLKQCSNVLF--DEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIII 185
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKD-------------------------------T 339
G AL+D YGKCG + ++ +F MP++D T
Sbjct: 186 GNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNT 245
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++WTA+I+ FA NG G EA F +M EG+ P+ TF +LSACA L+ +G+
Sbjct: 246 VSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEI--- 302
Query: 400 MRHVYLVEPHVYHYAC-------MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
H +++ Y C +ID+ + G A L + M E D+ W +L+ G
Sbjct: 303 --HGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGM-HEKDIVSWNSLITGF 359
Query: 453 QMHGNVELGEKVAQYLIDLD--PLNHAFYVNL 482
+G+ E V + +I+ D P NH ++ L
Sbjct: 360 AQNGHGEESLAVFERMIEADIRP-NHVTFLGL 390
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 257/441 (58%), Gaps = 12/441 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF + D +T+ M+ E ND + L ++ M G D
Sbjct: 217 GMVEEARGVFDGAEHRDAFTWTAMV-----SCFERNDLFM-EALAVFSDMREEGWPVDEA 270
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
++ C K G +G VV+ G+ V VQN +I ++ +C V +AR LFD
Sbjct: 271 VMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNG 330
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+ D SWN+MI GYL++G ++ A LF M ++ SW+++I G V ++ EAL +F
Sbjct: 331 ESLDHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFD 390
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M++ + KPD +T+ SV+SAC+ L A++ GK VH Y+R+ + +V+GT+L+DMY
Sbjct: 391 SMRAHEI----KPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMY 446
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR-PNHVTF 377
KCGC+E A VF + +K T W A+I A+NG + D F EMEA G PN +TF
Sbjct: 447 MKCGCMEAALEVFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITF 506
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
G+LSAC H GLVE+GR F +M++ Y + P++ HY CM+D+L RAG EAE +I+SMP
Sbjct: 507 TGVLSACRHGGLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMP 566
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M PDV WGALLG C HG+ E+GE+V + L+ LDP + F L ++YA G + VK
Sbjct: 567 MSPDVPAWGALLGACWKHGDSEVGERVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKD 626
Query: 498 TRNLMKERGIRKEVPGCSSVE 518
R MK++ + K V GCS VE
Sbjct: 627 LRGSMKQQHVAK-VAGCSMVE 646
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 220/499 (44%), Gaps = 85/499 (17%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG-----SL 81
T IL + C + R L +IH Q + S L D ++ +RLL F + + L
Sbjct: 3 TVSILDAQLSRCCSARHLLQIHAQFLASGLLA--DAYA-ASRLLLFTTSATAARLLPHPL 59
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
++ +F ++ + +T N +++A C LY M +PD T P
Sbjct: 60 HHSLQLFGLVRSPNAFTCNTLLKA------ALRQGFPHLCFPLYASM---PAAPDTYTHP 110
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
L C R D G V+ VK G D+++++N+++ ++ ACG V SAR +FD
Sbjct: 111 LLAAACAARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVW 170
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKK------------------------------ 231
D VSWN ++ Y+R GD++ A+ +F RM +
Sbjct: 171 DAVSWNTILATYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAE 230
Query: 232 -RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
R+ F+W ++++ F + EAL +F +M+ EE D+ + SV++ACA G I
Sbjct: 231 HRDAFTWTAMVSCFERNDLFMEALAVFSDMR----EEGWPVDEAVMVSVVAACAKSGVIQ 286
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKC----------------------------- 321
+G+ HG + R+GL V + L+ MY C
Sbjct: 287 NGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYL 346
Query: 322 --GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
G VE A +F MP KD ++W+AMI+ N EA + F M A ++P+ VT V
Sbjct: 347 KNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVS 406
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
++SAC++ +E+G+ +R Y + +ID+ + G EA + M E
Sbjct: 407 VISACSNLSALEQGKLVHEYIRK-YQYNITIVLGTSLIDMYMKCGCM-EAALEVFDMLEE 464
Query: 440 PDVFVWGALLGGCQMHGNV 458
W A++ G M+G V
Sbjct: 465 KGTPCWNAVIVGLAMNGLV 483
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/506 (36%), Positives = 282/506 (55%), Gaps = 23/506 (4%)
Query: 47 IHTQIIKSPCLQTNDHHSLITRLL-FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA 105
IH + K+ L H L T LL + AL SG +A ++F + L M RA
Sbjct: 32 IHCLLFKAGLLHAGAH--LPTALLSAYGALGRSG---HARDLFDEMPNQSLVARTAMARA 86
Query: 106 NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK------ECTKRLDGLVGASV 159
+A + + L L++ M+ G PD + +L CT R G V
Sbjct: 87 HAVSG------QAAQALDLFQDMIADGFMPDNVALAVVLAACHGAGSCTARRS--PGRMV 138
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ +V G+ DVFV +I ++ G +T AR +FD M + ++WN M+ Y+R+ D+
Sbjct: 139 HAFIVACGIEPDVFVSTELIRVYGERGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNKDI 198
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
+ A LF M +R++ SWN++I G+ GR +EAL LF++M S S V P+ T+++V
Sbjct: 199 EAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPS-SCTVHPNGPTMSTV 257
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKD 338
LSACA G ++ G WVH Y+ ++ ++ + + L+DMY KCG +++A VF++ P K+D
Sbjct: 258 LSACAGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRD 317
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
+WT +I A++G + F M+ G+ P+ VTFVG+L+ACAH GLV++G F
Sbjct: 318 LYSWTTVICGLAMHGRANDVLRMFSMMQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFY 377
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
M+ Y + P + HY CMID+L R G EA R+I++MPM+P++ +WGA L C++H +V
Sbjct: 378 SMQEKYRITPKIEHYGCMIDLLGRVGRLPEAYRMIQTMPMKPNMVIWGAFLSACKVHSSV 437
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
ELGE A + LDP + V + MYAKA + + + R M ++K PGCSSV
Sbjct: 438 ELGEIAAAEVTRLDPDDPWARVMMSSMYAKAQDWSGLARERREMNSLQMKK-TPGCSSVA 496
Query: 519 VDGVVHEFSMKGSPKVVKEELVLILN 544
+DG VHEF G+ + E+ +L
Sbjct: 497 LDGEVHEFVAGGNQHPLCAEICSVLE 522
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 286/534 (53%), Gaps = 54/534 (10%)
Query: 7 MVSYSLLNSPAKVSPPNKESTKLI---------LRNAIDECKNMRELKEIHTQIIKSPCL 57
M+S L +P P K + L L + +C +R L ++H +KS L
Sbjct: 1 MLSPPLAATPTPFLLPAKSKSPLAAAPAAQQHPLLPYLPQCTTLRALAQLHAAAVKS-GL 59
Query: 58 QTNDHHSLITRLLFFC---ALSVSGSLSYATNVFSHIK-RSDLYTYNIMIRANA-CKSSE 112
Q H + +TRLL C + LSYA VF I D+ YN ++R A C ++
Sbjct: 60 QA--HPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPGPGDVVWYNTLLRGYARCSAAG 117
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDV 172
+ + +++ +ML G++PD TF LLK C G G +G VK G +
Sbjct: 118 GARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHE 177
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
+V ++I+++ CG +AR +F R+
Sbjct: 178 YVLPTLINMYAECGDARAARTMFG-------------------------------RVDGE 206
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
+ S+N++IT V+ R EAL LF+EMQ+ + K +T+ SVLSACA LGA++ G
Sbjct: 207 CVVSYNAMITAAVRSSRPGEALVLFREMQAKGL----KLTSVTLISVLSACALLGALELG 262
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+W+H Y+R+ LD V + TAL+DMYGKCG +E A VF+ M +D AW+ MI +A +
Sbjct: 263 RWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANH 322
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
YG+EA F EM+ +G++P+ VTF+G+L AC+HSGLV +G F MR LV P + H
Sbjct: 323 SYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGLV-PGIKH 381
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
Y C+ D+L+R+G A I +P++P +W LL C G+ +LG++V + +++LD
Sbjct: 382 YGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELD 441
Query: 473 PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ YV ++ A GR++++ + R LM E+G+ K VPGCSS+EVD VHEF
Sbjct: 442 DSHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVK-VPGCSSIEVDNRVHEF 494
>gi|326530063|dbj|BAK08311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 255/420 (60%), Gaps = 5/420 (1%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCD-DVFVQNSVISLFMACGFVTSARM 193
P LTFPFL + + + S++ ++ G+ D++V NS++ ++ AC AR
Sbjct: 58 PSHLTFPFLGRAAARLASPRLALSLHAHPLRLGLLPWDLYVANSLVHMYAACALPDLARR 117
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LFDE+ ++VSWNA++ GY + DL A +F RM +R++ SW+++I G V+ G REA
Sbjct: 118 LFDEIPRPNLVSWNALLDGYAKCRDLLSARCVFNRMPQRDVVSWSAMIDGCVKCGEHREA 177
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
L LF+ M+++ V+ + +T+ SVL ACA+LG + G+ +H YL+ G ++ + T+
Sbjct: 178 LALFEMMEAAGAGNGVRANDVTMVSVLGACAHLGDLGRGRQMHRYLQEHGFLLNLRLATS 237
Query: 314 LVDMYGKCGCVERAYGVFKEMP--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
LVDMY KCG + A VF+ +P D L W A+I A++G E+ + F+EM+ GV
Sbjct: 238 LVDMYAKCGAISEALEVFRAVPVTTTDVLIWNAVIGGLAVHGLSMESVEIFQEMQNSGVV 297
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ +T++ LLSAC H GLV + W V + PHV HYAC++D+L RAG EA
Sbjct: 298 PDEITYLVLLSACVHGGLVGEA-WRLFRSLEVQGLRPHVEHYACLVDVLGRAGHLEEAYG 356
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
+++SMPMEP+V V GALL C +HG VELGE V + L+ L P + Y+ L ++YA A R
Sbjct: 357 VVKSMPMEPNVSVLGALLNACHLHGWVELGEVVGRQLVQLQPDHDGRYIGLSNIYAIARR 416
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+ + KK R +M+ERG++K +PG S ++V G +H F E+ +LN ++ MK
Sbjct: 417 WQEAKKARKVMEERGVKK-IPGFSEIDVGGRLHRFIAHDKAHSGSREIYALLNLITVEMK 475
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/382 (42%), Positives = 237/382 (62%), Gaps = 5/382 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DV N++I+ + CG + A LF +M +D+VSWN M+ Y + G +D A+ +F MK
Sbjct: 356 DVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMK 415
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
++NI SWNS+I+G Q G +AL+ F M E KPD+ T A LS+CA+L A+
Sbjct: 416 EKNIVSWNSLISGLTQNGSYLDALKSFMLMG----HEGQKPDQSTFACGLSSCAHLAALQ 471
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
GK +H + +SG D+ + AL+ MY KCG + A +FK++ D ++W ++I+ +A
Sbjct: 472 VGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYA 531
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
LNG G+EA F +ME EGV P+ VTFVG+LSAC+H GL+++G F M Y +EP
Sbjct: 532 LNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLA 591
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HYACM+D+L RAG EA +L+R M + + +WGALLG C++HGN+EL + A+ L++
Sbjct: 592 EHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLE 651
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
+P + YV L +M A+AGR+D+V + R LMKE+G K+ PG S +E+ VH F +
Sbjct: 652 FEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQ-PGWSWIELQNRVHAFLSED 710
Query: 531 SPKVVKEELVLILNGLSKIMKN 552
EL IL L+ M+N
Sbjct: 711 PAHPRAVELCHILRSLTAHMRN 732
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 156/307 (50%), Gaps = 28/307 (9%)
Query: 176 NSVISLFMACGF-----VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
N+V + M CGF + AR LFD+M R+VV+WNAMI Y+++ +D A+ LF M
Sbjct: 232 NTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP 291
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM-------QSSSVEEMVKPDKITIA-SVLSA 282
++N SW ++I G+V+ G+ EA +L +M Q++ + V+ ++ A + +
Sbjct: 292 EKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQ 351
Query: 283 CAYLGAIDHGKWVHGY-----------LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
+ + + GY L + + D+V +V Y + G ++ A +F
Sbjct: 352 ISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIF 411
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+EM +K+ ++W ++IS NG +A +F M EG +P+ TF LS+CAH ++
Sbjct: 412 EEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQ 471
Query: 392 KGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
G+ ++M+ Y + V + +I + ++ G S AE L + + DV W +L+
Sbjct: 472 VGKQLHQLVMKSGYATDLFVSN--ALITMYAKCGSISSAELLFKDID-HFDVVSWNSLIA 528
Query: 451 GCQMHGN 457
++GN
Sbjct: 529 AYALNGN 535
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 156/364 (42%), Gaps = 64/364 (17%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+C M E + Q++K + N + + G + A +F +K ++
Sbjct: 369 QCGRMDEALHLFKQMVKKDIVSWNT---------MVASYAQVGQMDAAIKIFEEMKEKNI 419
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
++N +I S T + LK + M G PD TF L C VG
Sbjct: 420 VSWNSLI------SGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVG 473
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++ V+K G D+FV N++I+++ CG ++SA +LF ++ + DVVSWN++I Y +
Sbjct: 474 KQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALN 533
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G+ REAL+LF +M+ E V PD++T
Sbjct: 534 GN-------------------------------GREALKLFHKMEV----EGVAPDEVTF 558
Query: 277 ASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+LSAC+++G ID G K ++ ++ +VD+ G+ G +E A+ + + M
Sbjct: 559 VGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMK 618
Query: 336 -KKDTLAWTAMISVFALNG---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+ W A++ ++G K A + E E P+ + LLS E
Sbjct: 619 INANAGIWGALLGACRIHGNLELAKFAAEKLLEFE-----PHKTSNYVLLSNMQ----AE 669
Query: 392 KGRW 395
GRW
Sbjct: 670 AGRW 673
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 153/371 (41%), Gaps = 68/371 (18%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+ NS+IS F G ++ AR LFD M R++VSWN+MI YL + ++ A LF +M
Sbjct: 45 NTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMP 104
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
R+++SW +IT + + G +A LF +
Sbjct: 105 TRDLYSWTLMITCYTRNGELAKARNLFNLLPY---------------------------- 136
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
KW + V A+V Y K + A +F MP KD ++W +M++ +
Sbjct: 137 --KW------------NPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYT 182
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG----RWCFVMMRHVYLV 406
NG + F EM V V++ ++ G VE G W F +
Sbjct: 183 RNGEMRLGLQFFEEMAERDV----VSWNLMV-----DGFVEVGDLNSSWEFFEK----IP 229
Query: 407 EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
P+ + M+ +R G +EA RL MP+ +V W A++ N + E ++
Sbjct: 230 NPNTVSWVTMLCGFARFGKIAEARRLFDQMPIR-NVVAWNAMIAAYVQ--NCHVDEAISL 286
Query: 467 YLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++ ++ N + + + Y + G+ D+ ++ N M R + + + G V
Sbjct: 287 FM-EMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNV-----AAQTAMISGYVQNK 340
Query: 527 SMKGSPKVVKE 537
M + ++ +
Sbjct: 341 RMDDARQIFNQ 351
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 32/185 (17%)
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+ GK G ++ A VF+ M K+T+ +MIS FA NG +A F M +
Sbjct: 22 ITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNI---- 77
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMM------------------------RHVYLVEPHV 410
V++ +++A H+ VE+ R F M R+++ + P+
Sbjct: 78 VSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYK 137
Query: 411 YHYAC---MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY 467
++ C M+ ++ F EA RL +MP + D+ W ++L G +G + LG + +
Sbjct: 138 WNPVCCNAMVAGYAKNRQFDEARRLFDAMPAK-DLVSWNSMLTGYTRNGEMRLGLQFFEE 196
Query: 468 LIDLD 472
+ + D
Sbjct: 197 MAERD 201
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 274/516 (53%), Gaps = 57/516 (11%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C+++R++K++H ++ L + S + L+F A+ V G ++A VF I D +
Sbjct: 18 CRSLRQIKQVHALMVLQGFLSDS---SALRELIFASAVGVRGGTAHARLVFDRIPHPDRF 74
Query: 98 TYNIMIRANACKSSETNDT---------HSGKCLKLYKQMLCTGISPDCLTFPFLLKECT 148
YN +IR A S D HS C + + PD TFPF+L+ C
Sbjct: 75 MYNTLIR-GAAHSDAPRDAVSIYARMARHSADCDLMT-------LRPDKRTFPFVLRACA 126
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL--------------------------- 181
G GA V+ VVK G D FV+N++I +
Sbjct: 127 AMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSA 186
Query: 182 ----FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
F G + +AR LFDE +D+VSWN MI Y + GD+ A +LF R++ SW
Sbjct: 187 MISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSW 246
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N++I+G+V+ G ++A+ELF++MQ+ KPD +T+ S+LSACA G +D G+ +HG
Sbjct: 247 NAMISGYVRCGSRKQAMELFEQMQAMGE----KPDTVTMLSLLSACADSGDLDAGRRLHG 302
Query: 298 YL--RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
+L R S + +G AL+DMY KCG + A VF M K+ W ++I AL+G+
Sbjct: 303 FLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHA 362
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
E+ FR+M V+P+ +TFV +L+AC+H G+V+KG F +M+ Y +EP++ HY C
Sbjct: 363 TESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGC 422
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
M+D+LSR GL EA I +M +EP+ +W LLG C++HG +EL E + L+
Sbjct: 423 MVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDA 482
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
+V L ++YA G + + R LM + G+ KE
Sbjct: 483 SGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEA 518
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/476 (37%), Positives = 284/476 (59%), Gaps = 16/476 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDC 137
G + A VF I D+ ++N++I SS + ++++M + + D
Sbjct: 163 GKMEVAKKVFDEIPERDVVSWNVLI------SSYVGHRKFEDAIAVFRRMRRESNLKADE 216
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T L C+ + VG ++ + V + + N+++ ++ CG V AR +FDE
Sbjct: 217 ATVVSTLSACSVLRNQEVGEEIH-RYVDAELEMTTKIGNALLDMYCKCGCVDKARAIFDE 275
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M N++V+ W +M+ GY +G LD A +LF R R+I W ++I G+VQ EAL+LF
Sbjct: 276 MGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLF 335
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
++MQ + ++PD + ++L CA GA++ GKW+HGY+ + + D V+GTALVD+
Sbjct: 336 RKMQI----QRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALVDV 391
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCGCVE+A VF EM ++DT +WT++I A+NG +A D F +ME G RP+ +TF
Sbjct: 392 YAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDITF 451
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+G+L+AC H GLVE+GR F M Y ++P HY+C+ID+L RAGL EAE L+ +P
Sbjct: 452 IGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAELLLEMIP 511
Query: 438 ME-PDVFV--WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
+E D+ V + +LL C+ +GN+++ E+V + L ++ + + + L +YA A R++D
Sbjct: 512 IESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYASANRWED 571
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
V R MKE GIRK PGCSS+EV+GV+HEF + G + +++ +L ++K M
Sbjct: 572 VTTVRRKMKELGIRK-FPGCSSIEVNGVLHEFMVGGPSHMEMDDIHSVLGQVTKWM 626
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 216/455 (47%), Gaps = 79/455 (17%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK 92
+ + C++M L +IH +I + + D+ +T+++ FC GS+ YA V ++
Sbjct: 21 DLLQSCESMAHLTQIHAKIFR---VGLQDNMDTLTKIVLFCTDPSRGSIRYAERVLGFVQ 77
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
L YN+MI+A A D + K L L+ ++ G++PD T P + K
Sbjct: 78 SPCLVMYNLMIKAVA------KDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLGK 131
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
+ G V+G VVK G D V NSV+ ++ A G + A+ +FDE+ RDVVSWN +I
Sbjct: 132 VVEGEKVHGYVVKSGF--DACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISS 189
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y+ + A+ +FRRM++ E +K D
Sbjct: 190 YVGHRKFEDAIAVFRRMRR----------------------------------ESNLKAD 215
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+ T+ S LSAC+ L + G+ +H Y+ + L+ IG AL+DMY KCGCV++A +F
Sbjct: 216 EATVVSTLSACSVLRNQEVGEEIHRYV-DAELEMTTKIGNALLDMYCKCGCVDKARAIFD 274
Query: 333 EMPKKDTLAWTAMISVFA--------------------------LNGYGK-----EAFDT 361
EM K+ + WT+M+S +A +NGY + EA
Sbjct: 275 EMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKL 334
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR+M+ + +RP++ V LL CA +G +E+G+W + + V A ++D+ +
Sbjct: 335 FRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTA-LVDVYA 393
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ G +A + M E D W +++ G ++G
Sbjct: 394 KCGCVEKALEVFYEMK-ERDTASWTSVIYGLAVNG 427
>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/452 (39%), Positives = 261/452 (57%), Gaps = 21/452 (4%)
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK--RLD 152
+++ YN MIR S T + + Y ML G+ + TFP L+K CT
Sbjct: 348 NIFMYNSMIRGYVLSHSPT------RAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSS 401
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
L+G V+ VV FG +D FV +++I + + +AR LFD + NRDVV W AMI G
Sbjct: 402 KLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDG 461
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y + GD++ A LF M +RN SW++++ + + G +E L LF+ MQ E P+
Sbjct: 462 YGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQ----EAGTMPN 517
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+ + SVL+ACA+LGA+ G WVH Y ++ D + ++ TALVDMY KCGCVE A F+
Sbjct: 518 ESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQ 577
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
+P KD AW AMIS A+NG ++ + F +M + G +P TFV +L+AC H+ LV +
Sbjct: 578 GIPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVRE 637
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP---MEPDVFVWGALL 449
G F M Y VEP HYAC++D+++RAG+ +EAE+ I D VWGA L
Sbjct: 638 GLKLFEQMSSNYGVEPQXEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAXL 697
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G C+ +GN+E+G +V + L D+ + +V ++Y +AG + K+ R L+ E G++K
Sbjct: 698 GACRTYGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEXGMKK 757
Query: 510 EVPGCSSVEVDGVVHEF-----SMKGSPKVVK 536
+ PGCS +EVDG V EF S +P++ K
Sbjct: 758 K-PGCSIIEVDGTVEEFLAGDLSHSQAPQICK 788
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 135/304 (44%), Gaps = 43/304 (14%)
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
++ ++ E ++ V S + +G R ++ ++L RNIF +NS+I G+V
Sbjct: 306 YLNDGKIQVIEDISQGVESIPSAFVGLFRGDNVGKKINL----SLRNIFMYNSMIRGYVL 361
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH--GKWVHGYLRRSGL 304
A+ + +M + + + T ++ AC LG+ G VH ++ G
Sbjct: 362 SHSPTRAILCYLDMLNYG----LLANNYTFPPLIKACTTLGSSSKLIGCLVHAHVVTFGF 417
Query: 305 D-------------------------------CDVVIGTALVDMYGKCGCVERAYGVFKE 333
D DVV+ TA++D YGK G VE A +F++
Sbjct: 418 DEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYGKMGDVEHARILFED 477
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
MP+++ ++W+A+++ ++ G KE FR M+ G PN V +L+ACAH G + +G
Sbjct: 478 MPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACAHLGALAQG 537
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
W + + A ++D+ S+ G A + +P D W A++ G
Sbjct: 538 LWVHSYAKQCNFDSNPILATA-LVDMYSKCGCVESALSTFQGIP-NKDAGAWNAMISGVA 595
Query: 454 MHGN 457
M+G+
Sbjct: 596 MNGD 599
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/469 (37%), Positives = 263/469 (56%), Gaps = 44/469 (9%)
Query: 60 NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
+ H +++ + G + A +F I D+ ++N I A ET +
Sbjct: 164 SSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYA----ETGNYK-- 217
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L+L+K+M+ T + PD T +L C + +G V+ + G ++ + N++I
Sbjct: 218 EALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALI 277
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
L+ CG +L+ A LF+ + +++ SWN+
Sbjct: 278 DLYSKCG-------------------------------ELETACGLFQGLSNKDVISWNT 306
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I G+ +EAL LFQ+M S KP+ +T+ S+LSACA+LGAID G+W+H Y+
Sbjct: 307 LIGGYTHMNLYKEALLLFQDMLRSGE----KPNDVTMLSILSACAHLGAIDIGRWIHVYI 362
Query: 300 --RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
R G+ + T+L+DMY KCG +E A VF M + +W AMI FA++G
Sbjct: 363 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANA 422
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
AFD F M G+ P+ +TFVGLLSAC+HSG+++ GR F M Y + P + HY CMI
Sbjct: 423 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMI 482
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+ +GLF EAE++I +M MEPD +W +LL C+MHGNVELGE AQ LI ++P N
Sbjct: 483 DLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPG 542
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L ++YA A R+++V KTR L+ ++G++K VPGCSS+E+D VVHEF
Sbjct: 543 SYVLLSNIYATAERWNEVAKTRALLNDKGMKK-VPGCSSIEIDSVVHEF 590
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 240/421 (57%), Gaps = 16/421 (3%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS-GSLSYATNVFSHIKRSDL 96
CK ++ L+ IH Q+IK+ TN +++LL C LS L YA +VF I+ L
Sbjct: 12 CKTLQSLRIIHAQMIKTGLHNTN---YALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXL 68
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+N M R +A S + LKLY M+ G+ P+ TFPFLLK C K G
Sbjct: 69 LIWNTMFRGHALSSDPVS------ALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++GQV+KFG D+++ S+IS+++ G + A+ + D+ S+RDVVS+ A+I GY
Sbjct: 123 QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASR 182
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G ++ A +F + +++ SWN+ I+G+ + G +EALELF++M ++ V+PD+ T+
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTN----VRPDESTM 238
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+VLSACA G+I+ G+ VH ++ G ++ I AL+D+Y KCG +E A G+F+ +
Sbjct: 239 VTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSN 298
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD ++W +I + KEA F++M G +PN VT + +LSACAH G ++ GRW
Sbjct: 299 KDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWI 358
Query: 397 FVMM-RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
V + + + V +ID+ ++ G A+++ SM + + W A++ G MH
Sbjct: 359 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMH 417
Query: 456 G 456
G
Sbjct: 418 G 418
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/520 (35%), Positives = 284/520 (54%), Gaps = 34/520 (6%)
Query: 56 CLQTNDHHSLITRLL---------FFCALSVSGSLSYATNVFSHIKRS----DLYTYNIM 102
C Q D H + R+ A + G + A +FS + S +L ++N M
Sbjct: 162 CNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGM 221
Query: 103 IRANACKSSETNDTHSG---KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
I HSG + + ++ M G PD T +L D ++G +
Sbjct: 222 I---------AGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+G V+K G+ D V +++I ++ C + +FD+M + DV S NA I G R+G +
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332
Query: 220 DVALDLFRRMKKR----NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
+ +L LFR++K + N+ SW S+I Q GR EALELF+EMQ + V KP+ +T
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGV----KPNSVT 388
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
I +L AC + A+ HGK H + R G+ DV +G+AL+DMY KCG ++ + F +P
Sbjct: 389 IPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIP 448
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
K+ + W A+I+ +A++G KEA + F M+ G +P+ ++F +LSAC+ SGL E+G +
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSY 508
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M Y +E V HYACM+ +LSRAG +A +IR MP+ PD VWGALL C++H
Sbjct: 509 YFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVH 568
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
NV LGE A+ L +L+P N Y+ L ++YA G +++V + R++MK +G+RK PGCS
Sbjct: 569 NNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN-PGCS 627
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+EV VH +++ L+ LS MK G+
Sbjct: 628 WIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGY 667
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/462 (29%), Positives = 216/462 (46%), Gaps = 62/462 (13%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
++ + ++ H I+K+ ND H L T+LL A ++ + AT V + +++++
Sbjct: 28 SLSQTRQAHAHILKTGLF--NDTH-LATKLLSHYANNMC--FADATLVLDLVPEPNVFSF 82
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA-S 158
+ +I A S+ + H L + QML G+ PD P +K C L L A
Sbjct: 83 STLIYA----FSKFHQFHHA--LSTFSQMLTRGLMPDNRVLPSAVKACAG-LSALKPARQ 135
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
V+G G D FVQ+S++ +++ C + A +FD M DVVSW+A++ Y R G
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGC 195
Query: 219 LDVALDLFRRMK----KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+D A LF M + N+ SWN +I GF G EA+ +F +M E PD
Sbjct: 196 VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE----PDGT 251
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
TI+SVL A L + G +HGY+ + GL D + +AL+DMYGKC C VF +M
Sbjct: 252 TISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQM 311
Query: 335 PKKD-----------------------------------TLAWTAMISVFALNGYGKEAF 359
D ++WT+MI+ + NG EA
Sbjct: 312 DHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEAL 371
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR--WCFVMMRHVYLVEPHVYHYACMI 417
+ FREM+ GV+PN VT LL AC + + G+ CF + R + VY + +I
Sbjct: 372 ELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG---ISTDVYVGSALI 428
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
D+ ++ G + +P + ++ W A++ G MHG +
Sbjct: 429 DMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMHGKAK 469
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 33/203 (16%)
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
++ + H ++ ++GL D + T L+ Y C A V +P+ + +++ +I
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC---------- 396
F+ A TF +M G+ P++ + ACA ++ R
Sbjct: 87 YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146
Query: 397 ---FVM--MRHVY---------------LVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FV + H+Y + EP V ++ ++ +R G EA+RL M
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206
Query: 437 ---PMEPDVFVWGALLGGCQMHG 456
++P++ W ++ G G
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSG 229
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/486 (37%), Positives = 271/486 (55%), Gaps = 51/486 (10%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
S + LLF A++V G++++A VF I R D + YN +IR A ++ + +
Sbjct: 11 SELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRD------AVS 64
Query: 124 LYKQMLCTG----ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
LY +ML G + PD LTFPF+L+ CT G G V+ VVK G D FV+N++I
Sbjct: 65 LYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALI 124
Query: 180 SLFMACGF-------------------------------VTSARMLFDEMSNRDVVSWNA 208
+ +CG + +AR LFDE +D+VSWN
Sbjct: 125 GMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNV 184
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
MI Y + GD+ +A +LF ++ +R++ SWN +I+G+V+ G ALELF++MQ
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMG---- 240
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYL----RRSGLDCDVVIGTALVDMYGKCGCV 324
KPD +T+ S+LSACA G +D G+ +H L R+G VV+G AL+DMY KCG +
Sbjct: 241 EKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGF--PVVLGNALIDMYAKCGSM 298
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
+ A+ VF M KD W +++ AL+G+ E+ D F +M VRP+ +TFV +L AC
Sbjct: 299 KSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIAC 358
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+H G+V+KGR F +M+H Y VEP++ HY C++D+L RAGL EA I +M EP+ +
Sbjct: 359 SHGGMVDKGREFFNLMQHKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVI 418
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
W LL C++HG +EL + + L+ YV L ++YA G + +K R LM +
Sbjct: 419 WRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDD 478
Query: 505 RGIRKE 510
G+ KE
Sbjct: 479 SGVNKE 484
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/492 (36%), Positives = 281/492 (57%), Gaps = 22/492 (4%)
Query: 41 MRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
+ E+K+IH II S CL ++ +SL+ F+ L G+ A VF+ + D+ +
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGNYLWNSLVK---FYMEL---GNFGVAEKVFARMPHPDVSS 199
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+N+MI A S + LKLY +M+ GI PD T LL C D +G
Sbjct: 200 FNVMIVGYA------KQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKG 253
Query: 159 VYGQVVKFG--VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
V+G + + G ++ + N+++ ++ C A+ FD M +D+ SWN M++G++R
Sbjct: 254 VHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRL 313
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGG-RAREALELFQEMQSSSVEEMVKPDKIT 275
GD++ A +F +M KR++ SWNS++ G+ + G R ELF EM ++ E VKPD++T
Sbjct: 314 GDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEM---TIVEKVKPDRVT 370
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ S++S A G + HG+WVHG + R L D + +AL+DMY KCG +ERA+ VFK
Sbjct: 371 MVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT 430
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+KD WT+MI+ A +G G++A F M+ EGV PN+VT + +L+AC+HSGLVE+G
Sbjct: 431 EKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLH 490
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI-RSMPMEPDVFVWGALLGGCQM 454
F M+ + +P HY ++D+L RAG EA+ ++ + MPM P +WG++L C+
Sbjct: 491 VFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRG 550
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
++E E L+ L+P YV L ++YA GR+ KTR M+ RG++K
Sbjct: 551 GEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Query: 515 SSVEVDGVVHEF 526
S V V+G +H F
Sbjct: 611 SVVGVEG-LHRF 621
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 209/473 (44%), Gaps = 114/473 (24%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVF-SHIKR 93
++ C + + K++ QI++ + ++RL+FF A++ +L A +F +
Sbjct: 41 LENCNSRNQFKQVLAQIMRFNLICDTFP---MSRLIFFSAITYPENLDLAKLLFLNFTPN 97
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+++ YN MI A + +E C LY M+ +SPD TF +L+K
Sbjct: 98 PNVFVYNTMISAVSSSKNE--------CFGLYSSMIRHRVSPDRQTFLYLMK-------- 141
Query: 154 LVGASVYGQVVKFGVCDDV---------FVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
AS + VK C + ++ NS++ +M G A +F M + DV
Sbjct: 142 ---ASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS 198
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
S+N MI+GY + G FS EAL+L+ +M S
Sbjct: 199 SFNVMIVGYAKQG-----------------FSL--------------EALKLYFKMVSDG 227
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG--LDCDVVIGTALVDMYGKC- 321
+E PD+ T+ S+L C +L I GK VHG++ R G ++++ AL+DMY KC
Sbjct: 228 IE----PDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCK 283
Query: 322 ------------------------------GCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
G +E A VF +MPK+D ++W ++ L
Sbjct: 284 ESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSL-----L 338
Query: 352 NGYGKEAFDT------FREME-AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
GY K+ D F EM E V+P+ VT V L+S A++G + GRW ++ +
Sbjct: 339 FGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQ 398
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
L + + + +ID+ + G+ A + ++ E DV +W +++ G HGN
Sbjct: 399 L-KGDAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGN 449
>gi|6729034|gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 303/559 (54%), Gaps = 78/559 (13%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL-SVSGSLS 82
K+ K IL + ++ C+++ EL ++H +IKS ++ + ++RL+ FC + +LS
Sbjct: 3 KKHYKPIL-SQLENCRSLVELNQLHGLMIKSSVIR---NVIPLSRLIDFCTTCPETMNLS 58
Query: 83 YATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPF 142
YA +VF I +Y +N MIR +N + K L Y++ML G SPD TFP+
Sbjct: 59 YARSVFESIDCPSVYIWNSMIRG------YSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 112
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG---------------- 186
+LK C+ D G+ V+G VVK G +++V ++ ++M CG
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN 172
Query: 187 ----------FVTSARM-----LFDEMSNR------------------------------ 201
FV + R F EM +
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDPYFQSKVGF 232
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
+V+ ++I Y + GDL A LF M +R + SWNSIITG+ Q G A EAL +F +M
Sbjct: 233 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM- 291
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
++ + PDK+T SV+ A G G+ +H Y+ ++G D I ALV+MY K
Sbjct: 292 ---LDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKT 348
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGL 380
G E A F+++ KKDT+AWT +I A +G+G EA F+ M+ +G P+ +T++G+
Sbjct: 349 GDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGV 408
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
L AC+H GLVE+G+ F MR ++ +EP V HY CM+DILSRAG F EAERL+++MP++P
Sbjct: 409 LYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP 468
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
+V +WGALL GC +H N+EL +++ + + + L YV L ++YAKAGR+ DVK R
Sbjct: 469 NVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRE 528
Query: 501 LMKERGIRKEVPGCSSVEV 519
MK + + K V G SSVE
Sbjct: 529 SMKSKRVDK-VLGHSSVET 546
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 274/478 (57%), Gaps = 13/478 (2%)
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCL 138
SL++A N+F + D+ ++ ++ A + + + +++ +M+ G + P+ +
Sbjct: 191 SLAHARNLFDEMPDRDVVSWTTLVDGYARRGL------ADEAWRVFCRMVVAGGLQPNEV 244
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T ++ + G VY V GV V ++N++I +F G SAR +FD M
Sbjct: 245 TLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFDSM 304
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+ +DV SW M+ Y + GDL+ A LF M +RN SW+ +I + Q + EA+ LF+
Sbjct: 305 AVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFK 364
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH-GYLRRSGLDCDVVIGTALVDM 317
M +EE V+P + SVLSACA LG +D G+W++ Y+ V +G A +D+
Sbjct: 365 AM----IEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDV 420
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG + A +F EM +++ ++W +MI A++G +E F +++ + P+ +TF
Sbjct: 421 YAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITF 480
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+GLLSAC+HSGLV +GR F M+ +Y +EP HYACMID+L + GL EA + + MP
Sbjct: 481 LGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVAKGMP 540
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
ME D WGALL C+M+GNVE+GE A L+ L+PL+ YV + +YA ++D VK
Sbjct: 541 METDEAGWGALLNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYASKNKWDQVKI 600
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R LM+ERG++K PGCSS+EVDG HEF + V E++ L + +K G+
Sbjct: 601 LRVLMRERGVKKN-PGCSSIEVDGKFHEFLVADVSHVHSEDIYAALKNIYFHLKWEGY 657
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 196/463 (42%), Gaps = 85/463 (18%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
++ C + ++H + S H +RLL FCALS + +A + +
Sbjct: 44 LESCASFPRFLQLHALLTVSGLAA---HRFPASRLLAFCALSTPPRVDHAAAILARASAP 100
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ Y M+RA + L+++++ + D T F +K +
Sbjct: 101 NAYMLATMMRAF------LRARLPSRASALFRRVIRESLPADARTLVFAIKAAASEHEHH 154
Query: 155 V---GASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
G V+ +K+G V V V N+++ + + AR LFDEM +RDVVSW ++
Sbjct: 155 SPSGGEGVHCVALKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLV 214
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY R G D A +F RM V GG ++
Sbjct: 215 DGYARRGLADEAWRVFCRM--------------VVAGG--------------------LQ 240
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC------- 323
P+++T+ +V+SA +G + G+ V+ Y+ G+ V + AL+DM+GK GC
Sbjct: 241 PNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREV 300
Query: 324 ------------------------VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
+E A +F +MP+++ ++W+ MI+ ++ +EA
Sbjct: 301 FDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAV 360
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC---FVMMRHVYLVEPHVYHYACM 416
F+ M EGV P + V +LSACA G ++ GRW +V+ L V
Sbjct: 361 RLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLT---VNLGNAF 417
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
ID+ ++ G F A +L M E +V W +++ +HG E
Sbjct: 418 IDVYAKCGDFDAASKLFAEMA-ERNVVSWNSMIMAHAVHGQSE 459
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 187/519 (36%), Positives = 290/519 (55%), Gaps = 50/519 (9%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFF-CALSVSGSLSYATNVFSHIKRSDLYT 98
++R L++ H ++ + C ++ +L+T+LL CA +GS++Y +F + D +
Sbjct: 22 HLRRLQQAHAHLVVTGCHRSR---ALLTKLLTLSCA---AGSIAYTRRLFRSVSDPDSFL 75
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+N +I+A+ + S + Y++ML + I P TF ++K C +G
Sbjct: 76 FNSLIKAS------SKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTL 129
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
V+ V G D FVQ ++I+ + AR +FDE
Sbjct: 130 VHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDE--------------------- 168
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
M +R+I +WNS+I+G+ Q G A EA+E+F +M+ S VE PD T S
Sbjct: 169 ----------MPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVE----PDSATFVS 214
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
VLSAC+ LG++D G W+H + SG+ +VV+ T+LV+M+ +CG V RA VF M + +
Sbjct: 215 VLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGN 274
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
+ WTAMIS + ++GYG EA + F M+A GV PN VTFV +LSACAH+GL+++GR F
Sbjct: 275 VVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFA 334
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV-FVWGALLGGCQMHGN 457
M+ Y V P V H+ CM+D+ R GL +EA + ++ + + V VW A+LG C+MH N
Sbjct: 335 SMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKN 394
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
+LG +VA+ LI+ +P N YV L +MYA AGR D V+ RN+M +RG++K+V G S++
Sbjct: 395 FDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQV-GYSTI 453
Query: 518 EVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFG 556
+VD + FSM E+ L+ L K+ G+
Sbjct: 454 DVDNRSYLFSMGDKSHPETNEIYCFLDELIWRCKDAGYA 492
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 94/229 (41%), Gaps = 30/229 (13%)
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
+V+SA +L + H +L +G + T L+ + G + +F+ +
Sbjct: 15 AVVSAGPHLRRLQQA---HAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDP 71
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
D+ + ++I + G+ +A +R M + P+ TF ++ ACA L+ G
Sbjct: 72 DSFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGT--- 128
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFS---------EAERLIRSMPMEPDVFVWGAL 448
LV HV+ D +A L + A ++ MP + + W ++
Sbjct: 129 -------LVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMP-QRSIVAWNSM 180
Query: 449 LGGCQMHG----NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
+ G + +G VE+ K+ + ++ D A +V++ ++ G D
Sbjct: 181 ISGYEQNGLANEAVEVFNKMRESRVEPDS---ATFVSVLSACSQLGSLD 226
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/485 (36%), Positives = 267/485 (55%), Gaps = 50/485 (10%)
Query: 44 LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMI 103
L++ H +SP H +++ + G + A +F I D+ ++N MI
Sbjct: 142 LEDAHKVFDESP------HRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMI 195
Query: 104 RANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQV 163
A ET + + L+L+K M+ T + PD T ++ C + +G V+ +
Sbjct: 196 SGYA----ETGNYK--EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWI 249
Query: 164 VKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
G ++ + N++I L+ CG +L+ A
Sbjct: 250 DDHGFGSNLKIVNALIDLYSKCG-------------------------------ELETAC 278
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
LF + +++ SWN++I G+ +EAL LFQEM S P+ +T+ S+L AC
Sbjct: 279 GLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE----TPNDVTMLSILPAC 334
Query: 284 AYLGAIDHGKWVHGYL--RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
A+LGAID G+W+H Y+ R G+ + T+L+DMY KCG +E A+ VF + K +
Sbjct: 335 AHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS 394
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
W AMI FA++G +FD F M G+ P+ +TFVGLLSAC+HSG+++ GR F M
Sbjct: 395 WNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 454
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
Y + P + HY CMID+L +GLF EAE +I +M MEPD +W +LL C+MHGNVELG
Sbjct: 455 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELG 514
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
E AQ LI ++P N YV L ++YA AGR+++V TR L+ ++G++K VPGCSS+E+D
Sbjct: 515 ESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKK-VPGCSSIEIDS 573
Query: 522 VVHEF 526
VVHEF
Sbjct: 574 VVHEF 578
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 237/421 (56%), Gaps = 16/421 (3%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS-GSLSYATNVFSHIKRSDLYTY 99
++ L+ IH Q+IK+ TN +++L+ FC LS L YA +VF I+ +L +
Sbjct: 3 LQSLRMIHAQMIKTGLHNTN---YALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIW 59
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
N M R +A S + LKLY M+ G+ P+ TFPFLLK C K G +
Sbjct: 60 NTMFRGHALSSDPVS------ALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQI 113
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+G V+K G D++V S+IS+++ G + A +FDE +RDVVS+ A+I GY G +
Sbjct: 114 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYI 173
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
+ A +F + +++ SWN++I+G+ + G +EALELF++M ++ V+PD+ T+ +V
Sbjct: 174 ENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN----VRPDESTMVTV 229
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
+SACA G+I+ G+ VH ++ G ++ I AL+D+Y KCG +E A G+F+ +P KD
Sbjct: 230 VSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDV 289
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++W +I + KEA F+EM G PN VT + +L ACAH G ++ GRW V
Sbjct: 290 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 349
Query: 400 M-RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+ + + V +ID+ ++ G A ++ S+ + + W A++ G MHG
Sbjct: 350 IDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRA 408
Query: 459 E 459
+
Sbjct: 409 D 409
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 282/497 (56%), Gaps = 18/497 (3%)
Query: 26 STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYAT 85
+ L + + C MR+LK +H ++ + +DH ++ +L F A+S G L YA
Sbjct: 5 TVAFTLAHMAERCTCMRDLKLLHAHAFRT---RLHDHTVVLGKLFRFAAVSPLGDLRYAH 61
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
+F + + YN +IRA+A + T + M ++PD +F FLLK
Sbjct: 62 RMFDQMPHPTTFFYNTLIRAHA------HSTTPSLSSLSFNLMRQNNVAPDQFSFNFLLK 115
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR---- 201
++ V+G V+KFG C + VQN +I + G AR +F+++
Sbjct: 116 SRSRTTPLTHHNDVHGAVLKFGFCRHLHVQNGLIHFYANRGMTLLARRVFEDVLQLGLEV 175
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
DVVSW+ +++ ++++G+L+VA +F M +R++ SW +++TG+ Q R REALELF EM+
Sbjct: 176 DVVSWSGLLVAHVKAGELEVARRVFDEMPQRDVVSWTAMLTGYSQAKRPREALELFGEMR 235
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
S V PD++T+ S++SACA LG ++ G VH ++ +G V + AL+DMYGKC
Sbjct: 236 RSGV----WPDEVTMVSLVSACASLGDMETGMMVHRFVEENGFGWMVALCNALIDMYGKC 291
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
GC+E A+ VF M +K + W M++V A G EAF F M GV P+ VT + LL
Sbjct: 292 GCLEEAWRVFHGMTRKSLITWNTMVTVCANYGNADEAFRLFEWMVCSGVVPDSVTLLALL 351
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
A AH GLV++G F M Y VEP + HY +ID+L RAG EA L+ ++P+ +
Sbjct: 352 VAYAHKGLVDEGIRLFESMDRDYGVEPRIEHYGAVIDMLGRAGRLQEAYDLLTNIPIPCN 411
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
VWGALLG C++HG+VE+GEK+ + L++L P +Y+ L D+Y AG+ + +TR
Sbjct: 412 DAVWGALLGACRIHGDVEMGEKLIKKLLELKPDEGGYYILLRDIYVAAGQTVEANETRQA 471
Query: 502 MKERGIRKEVPGCSSVE 518
M RK PGCS VE
Sbjct: 472 MLASRARKN-PGCSWVE 487
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 187/523 (35%), Positives = 289/523 (55%), Gaps = 48/523 (9%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
E ++ + ++H QI+KSP + + +T L F ALS +G L+YA + + + +
Sbjct: 2 EITSLSQAMQLHAQILKSPDPKKQTRN--LTPLFTFAALSPAGDLTYAHLILNSLSTQNS 59
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC--TGISPDCLTFPFLLKECTKRLDGL 154
+ +N MIRA S+T D + L L+ MLC T PD T+PFLLK C +
Sbjct: 60 FFHNTMIRA----YSQTPD--PTQALHLFLSMLCQPTSPRPDKFTYPFLLKSCARLKQPR 113
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
VG ++G + K G+ D +V N +I ++ +CG
Sbjct: 114 VGKQLHGLIYKSGLESDRYVSNGLIHMYSSCG---------------------------- 145
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+SG A +F +M+ R++ SW S+I GFV RA EA+ LF+EM VE+ V+P++
Sbjct: 146 KSGR---AYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEM----VEDGVEPNEA 198
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ SVL ACA GA+ G+ V G + + + + TAL+DMY KCG + A VF +
Sbjct: 199 TVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCGSIGSARKVFDGI 258
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
KD AWTAMIS A +G +EA F +ME+ G+RP+ T +LSAC ++G +G
Sbjct: 259 VNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGF 318
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M Y ++P + HY CM+D+L+R G EAE IR MP+EPDV +W L+ ++
Sbjct: 319 AYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKV 378
Query: 455 HGNVELGEKVAQY--LIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
HG+++ E++ + L+ +D + YV L ++YA AG++ D K R LM ++G+ K P
Sbjct: 379 HGDIDRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHDKAKMRELMNQKGLSKP-P 437
Query: 513 GCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
GCS +EVDG+VHEF+ S + E++ L+ + + +K G+
Sbjct: 438 GCSRIEVDGLVHEFAAGDSGHIEAEKIYAKLDEVEERLKAEGY 480
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 173/516 (33%), Positives = 286/516 (55%), Gaps = 21/516 (4%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
+ +H+ I+ P +N + LL G L YA +F + +++T+ + +
Sbjct: 80 RRLHSHILSLP--HSNSQPPFLANLLIEM-YGKCGRLPYARELFESMPSRNVHTWTVAMA 136
Query: 105 A---NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV--GASV 159
A N C S + L +++M +G PD +TF +L + + G +
Sbjct: 137 AFSHNGCHS---------EALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREI 187
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ G+ +V V +VIS++ CG + AR F+E+ ++ V+WNAM+ Y G
Sbjct: 188 HRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRD 247
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
AL+LFR M + WN++I + Q GR ++AL+L++ M ++ + P + T +V
Sbjct: 248 REALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTD---LAPKQGTFVTV 304
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
+ CA L A+ G+ +H +R + D ++++ ALV MYGKCGC++ A VF M KD
Sbjct: 305 IDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDE 364
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++W +IS +A +G+ +A ++EM+ +GV+P VTFVGLLSAC+H GLV G F
Sbjct: 365 ISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYR 424
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M+ + ++P V H+ C+ID+L R G +EAE +++SMP++ + W +LLG C+ HG+++
Sbjct: 425 MQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLK 484
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
G + A ++D P YV L ++YA AGR+ DV+K R +M RG++K PG S +E+
Sbjct: 485 RGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKS-PGKSWIEI 543
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
VVHEF S EE+ + L + + MK G+
Sbjct: 544 GDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLGY 579
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 256/448 (57%), Gaps = 42/448 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G ++ A VF + S + +N ++ A + + ++++K ML G++ D +
Sbjct: 169 GDVAAARLVFDAAEESGVVMWNAIVAAY------LKNGDWMEVVEMFKGMLEVGVAFDEV 222
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T ++ C + D +G V G V + G+ + + +++ ++ CG + AR LFD
Sbjct: 223 TLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDG- 281
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
M+ R++ +W+++I+G+ Q + REAL LF
Sbjct: 282 ------------------------------MQSRDVVAWSAMISGYTQADQCREALGLFS 311
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQ + VE P+ +T+ SVLSACA LGA++ GKWVH Y+RR L ++GTALVD Y
Sbjct: 312 EMQLARVE----PNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFY 367
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCGC++ A F+ MP K++ WTA+I A NG G+EA + F M G+ P VTF+
Sbjct: 368 AKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFI 427
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L AC+HS LVE+GR F M Y ++P V HY CM+D+L RAGL EA + IR+MP+
Sbjct: 428 GVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPI 487
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EP+ +W ALL C +H NV +GE+ + +I L+P + YV L ++YA AG++ D
Sbjct: 488 EPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMV 547
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R MK+RGI K PGCS +E+DGVV EF
Sbjct: 548 RKEMKDRGIEK-TPGCSLIELDGVVFEF 574
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 198/420 (47%), Gaps = 54/420 (12%)
Query: 44 LKEIHTQIIKSPCL--QTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT--Y 99
L ++H +IKS L HSL+ A + L YA ++F R L T Y
Sbjct: 32 LPQLHAALIKSGELTGSAKSFHSLLE-----AAAASPTLLPYAVSLFRLGPRPPLSTPCY 86
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQML--CTGISPDCLTFPFLLKECTKRLDGLVGA 157
N+++RA + H L L+ +ML + D T LK C++ VG
Sbjct: 87 NVLMRAF------LHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGR 140
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
V VK G+ D FV +S+I ++ +CG V +AR++FD VV
Sbjct: 141 GVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVM------------ 188
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
WN+I+ +++ G E +E+F+ M +E V D++T+
Sbjct: 189 -------------------WNAIVAAYLKNGDWMEVVEMFKGM----LEVGVAFDEVTLV 225
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
SV++AC +G GKWV G++ GL + + TAL+DMY KCG + +A +F M +
Sbjct: 226 SVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSR 285
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
D +AW+AMIS + +EA F EM+ V PN VT V +LSACA G +E G+W
Sbjct: 286 DVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVH 345
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+R L + A ++D ++ G +A SMP++ + + W AL+ G +G
Sbjct: 346 SYVRRKRLSLTTILGTA-LVDFYAKCGCIDDAVEAFESMPVK-NSWTWTALIKGMATNGR 403
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 209/649 (32%), Positives = 329/649 (50%), Gaps = 112/649 (17%)
Query: 9 SYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITR 68
S S+L+ PP K + N +++CKN+ K+IH+ IIK+ N+ + ++
Sbjct: 9 SPSILHFLPASDPPYKILEQHPYLNLLEKCKNINTFKQIHSLIIKT---GLNNTVFVQSK 65
Query: 69 LLFFCALSVSGSLSYATNVFSHIK---RSDLYTYNIMIRA-------------------- 105
L+ FCA+S SG LSYA ++F + + +++ +N +IR
Sbjct: 66 LIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYY 125
Query: 106 -------------NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT------------- 139
+C ++ TH GK L + L +P T
Sbjct: 126 GVQPNSHTFPFLFKSCTKAKA--THEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMD 183
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDD------------VFVQNSVISLFMACGF 187
F L+ + + D + ++ V G DD V N++IS ++ G
Sbjct: 184 FARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGR 243
Query: 188 VTSARMLFDEMSNRDVV--------------------------SW-------------NA 208
A + F EM +V+ SW NA
Sbjct: 244 FEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNA 303
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+I Y + G+ D+A +LF ++++++ SWN++I G+ EAL LF+ M S+V
Sbjct: 304 LIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNV--- 360
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC-DVVIGTALVDMYGKCGCVERA 327
KP+ +T +L ACA LGA+D GKWVH Y+ ++ + + + T+L+DMY KCGC+E A
Sbjct: 361 -KPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAA 419
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV-RPNHVTFVGLLSACAH 386
VF+ M ++ +W AM+S FA++G+ + A F EM +G+ RP+ +TFVG+LSAC
Sbjct: 420 ERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQ 479
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+GLV+ G F M Y + P + HY CMID+L+RA F EAE L+++M MEPD +WG
Sbjct: 480 AGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWG 539
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
+LL C+ HG VE GE VA+ L L+P N +V L ++YA AGR+DDV + R + ++G
Sbjct: 540 SLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKG 599
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++K VPGC+S+E+DG VHEF + + +LN + K+++ GF
Sbjct: 600 MKK-VPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGF 647
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 256/441 (58%), Gaps = 12/441 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF ++R D++T+ MI S + + L L+ M G D
Sbjct: 214 GMVDEARKVFDGVERKDVFTWTAMI------SCFQRNGKFAEALALFSDMRGEGWPVDEA 267
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
++ C + G +G + G+ + VQN++I ++ + V +AR LFD
Sbjct: 268 VMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSG 327
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D SWN+MI GYL++G + A +LF M ++ SW ++I+G VQ ++ EAL +F
Sbjct: 328 QCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFN 387
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
MQ+ + KPD++T+ SV+SAC + +++ GK +H Y+R V++GT+L+DMY
Sbjct: 388 NMQAQGI----KPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMY 443
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV-RPNHVTF 377
KCGC+E A VF M ++ T W A+I A+NG ++ D F EME+ PN +TF
Sbjct: 444 MKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITF 503
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
G+LSAC H+GLVE+G+ F +M+H Y + P++ HY CM+D+L RAG EAE LI SMP
Sbjct: 504 TGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMP 563
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M PDV WGALLG C HG+ E+GE+V + L++LDP + F+ L ++YA G + VK
Sbjct: 564 MSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKD 623
Query: 498 TRNLMKERGIRKEVPGCSSVE 518
R MK+ + K +PG S VE
Sbjct: 624 LRGSMKQWHVPK-IPGSSVVE 643
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 148/590 (25%), Positives = 253/590 (42%), Gaps = 125/590 (21%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS--VSGSLSYA 84
T +L + C + R L +IH Q + S L +RL+ F + + ++
Sbjct: 3 TVTLLDAHLARCSSARHLLQIHAQFVASGLLADA---FAASRLILFTTSTRLLPLPFHHS 59
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
+ + R + ++ N++++A + E H CL LY M +PDC T L
Sbjct: 60 LRLLHVVHRPNAFSCNMVLKA----AREHGLPH--LCLPLYASM---SAAPDCYTHTILA 110
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
C R G V+ V+ G ++++ N+++S++ ACG + AR +FD D V
Sbjct: 111 AACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAV 170
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKR-------------------------------N 233
SWN ++ Y+++ D+D A+ +F RM +R +
Sbjct: 171 SWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVERKD 230
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
+F+W ++I+ F + G+ EAL LF +M+ E D+ + V++ACA L +G+
Sbjct: 231 VFTWTAMISCFQRNGKFAEALALFSDMRG----EGWPVDEAVMVCVVAACARLEVTRNGE 286
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMY---------------GKC----------------G 322
HG R+GL + + AL+ MY G+C G
Sbjct: 287 MCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNG 346
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
V+ A +F MP KD ++WT MIS N EA F M+A+G++P+ VT V ++S
Sbjct: 347 SVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVIS 406
Query: 383 ACAHSGLVEKGRWCFVMMR-HVYLVEPHVYHYACMIDILSRAGLFSEA--------ER-- 431
AC + +E+G+ +R H Y + V +ID+ + G A ER
Sbjct: 407 ACTNMSSLEQGKSMHEYIREHQYTIT--VILGTSLIDMYMKCGCLESALEVFDTMEERGT 464
Query: 432 ---------------LIRSMPM----------EPDVFVWGALLGGCQMHGNVELGE---K 463
+++S+ M P+ + +L C+ G VE G+ K
Sbjct: 465 PCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFK 524
Query: 464 VAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
+ Q+ + P N Y + D+ +AG VK+ NL++ + +VP
Sbjct: 525 LMQHKYHIIP-NIRHYGCMVDLLGRAGY---VKEAENLIESMPMSPDVPA 570
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 166/446 (37%), Gaps = 123/446 (27%)
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
++ Q V G+ D F + +I F TS R+L +
Sbjct: 23 IHAQFVASGLLADAFAASRLIL------FTTSTRLLPLPFHH------------------ 58
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+L L + + N FS N ++ + G L L+ M ++ PD T
Sbjct: 59 ---SLRLLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASMSAA-------PDCYTHTI 108
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC--------------- 323
+ +ACA AI+ G+ VH + R G ++ + AL+ MY CGC
Sbjct: 109 LAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWD 168
Query: 324 ----------------VERAYGVFKEMP-------------------------------K 336
V++A GVF MP +
Sbjct: 169 AVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVER 228
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD WTAMIS F NG EA F +M EG + V +++ACA + G C
Sbjct: 229 KDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMC 288
Query: 397 FVMMRHVYL-----VEPHVYH-YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
+ L V+ + H Y+ +++++ LF + L D F W +++
Sbjct: 289 HGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCL--------DQFSWNSMIA 340
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
G +G+V+ +++ + D D ++ ++ C + + + N M+ +GI+ +
Sbjct: 341 GYLKNGSVKDAKELFTVMPDKDNVSWTTMISGC---VQNDQSSEALTIFNNMQAQGIKPD 397
Query: 511 -------VPGC---SSVEVDGVVHEF 526
+ C SS+E +HE+
Sbjct: 398 EVTLVSVISACTNMSSLEQGKSMHEY 423
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 188/580 (32%), Positives = 293/580 (50%), Gaps = 75/580 (12%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVSGSLSYATNVFSHIKRSD 95
CK + L+++ QII + Q N + +++T + +++A ++F H
Sbjct: 35 CKTVALLQKVQAQII-THGFQYNGYVAPNVVTSWVGL------KQMAHARHLFDHFPDPK 87
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
+ +N + R ++ + + L+ +M + P+C TFP +LK C K +
Sbjct: 88 VELWNAISRG------YFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVE 141
Query: 156 GASVYGQVVKFGVCDDVFVQ-------------------------------NSVISLFMA 184
G ++ +V+K G+ + FV S+IS ++
Sbjct: 142 GEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYIL 201
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
C V AR LFD RDVV WN M+ GY+ GD+ A LF M R+ SWN+++ G+
Sbjct: 202 CNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGY 261
Query: 245 VQGGRAREALELFQEMQSSSV----------------------------EEMVKPDKITI 276
G +LF+EM +V + +V P+ T+
Sbjct: 262 ANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATL 321
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+VLSACA LGA+D GKWVH Y G + +G AL+DMY KCG +E A VF+ M
Sbjct: 322 VTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDL 381
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD + W +MI A +G G +A F +M+ G +P+ +TF+G+L +C H GLVE+G
Sbjct: 382 KDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSY 441
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F M + Y + P + HY CM+D+ RAGL A ++ MPME D +W ALLG C+++
Sbjct: 442 FNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYK 501
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
N++L E Q LI L+P N A YV L ++Y GR+ DV + + LM++ G K++PGCS
Sbjct: 502 NIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTG-SKKLPGCSL 560
Query: 517 VEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFG 556
+EV+ V EF +E+ +L GL K++++ G+G
Sbjct: 561 IEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYG 600
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 196/565 (34%), Positives = 290/565 (51%), Gaps = 88/565 (15%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS---------GSLSYAT 85
+ + K L +IH ++++ L+TN + L T+ + C+ S++ + +A
Sbjct: 159 LQQSKTRANLLQIHAFMLRN-ALETNPN--LFTKFIATCS-SIALLAPLYDPLAGIVHAR 214
Query: 86 NVFSH-IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLTFPFL 143
+F H R D + N MI+A + + LY+ + T +PD TF L
Sbjct: 215 RMFDHRPHRDDAFLCNSMIKAYVGMRQYS------ESFALYRDLRRNTSFTPDSFTFSVL 268
Query: 144 LKECTKRLDGLVGASVYGQVV-------------------KFGVCD-------------- 170
K C + G ++ VV KFG D
Sbjct: 269 AKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQ 328
Query: 171 -----------------------------DVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
D N++I ++ G + SAR LFDEM R
Sbjct: 329 VSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPER 388
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
VVSW MI GY +G+LD A LF M ++N+FSWN++I+G+ Q + EAL+LF EMQ
Sbjct: 389 SVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQ 448
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
S++ ++PD++TI SVL A A LGA+D G WVH ++RR LD +GTAL+DMY KC
Sbjct: 449 STTS---LEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKC 505
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + ++ GVF MP+K+T +W A+I+ FA+NG KEA F EM +G PN +T +G+L
Sbjct: 506 GEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVL 565
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
SAC HSGLVE+G+ F M L P + HY CM+D+L RAG EAE+L+ SMP E +
Sbjct: 566 SACNHSGLVEEGKRWFKAMEEFGLT-PKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEAN 624
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+ + L C +V E+V + I ++ N Y+ L ++YA R+ + + + L
Sbjct: 625 GIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGL 684
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEF 526
M+ G++KE GCS++EVD V EF
Sbjct: 685 MRRNGVKKEA-GCSAIEVDSRVWEF 708
>gi|357140545|ref|XP_003571826.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Brachypodium distachyon]
Length = 489
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 164/420 (39%), Positives = 253/420 (60%), Gaps = 5/420 (1%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCD-DVFVQNSVISLFMACGFVTSARM 193
P LTFPFL + + + S++ ++ G+ D+ + NS + ++ AC AR
Sbjct: 58 PSHLTFPFLGRAAARLASPRLALSLHSHPLRLGLLPCDLHIANSFVHMYAACALPDLARR 117
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LFDE+ + VSWNA++ GY + DL A ++F RM R++ SW+++I G V+ G REA
Sbjct: 118 LFDEIPRPNPVSWNALLDGYAKCRDLSAAREVFDRMPHRDVVSWSAMIDGCVKCGEYREA 177
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
L LF+ M++++ V+ + +T+ S+L ACA+LG + G+ +H YL+ G ++ + T+
Sbjct: 178 LALFEMMEAAATGHGVRANDVTMISMLGACAHLGDLRRGRQMHRYLQERGFLLNLRLATS 237
Query: 314 LVDMYGKCGCVERAYGVFKEMP--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
LVDMY KCG + A VF+ +P D L W AMI A++G G E + F+EM+ GV
Sbjct: 238 LVDMYAKCGAISEALEVFRAVPVASTDVLMWNAMIGGLAVHGMGMETVELFQEMQHSGVV 297
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ +T++GLLSAC H GLV++ W F + PHV HYAC++D+LSRAG EA
Sbjct: 298 PDEITYLGLLSACVHGGLVDEA-WRFFCSLEAQGLRPHVEHYACLVDVLSRAGRLEEAYG 356
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
+++SMPMEP V V GA+L C +HG VELGE V + L+ L P + Y+ L ++YA A R
Sbjct: 357 VVKSMPMEPSVSVLGAILNACHLHGWVELGEVVGRQLVRLQPDHDGRYIGLSNIYAVAKR 416
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+ + KK R +M ERG++K +PG S ++V G F + ++ +L+ ++ MK
Sbjct: 417 WQEAKKARKVMSERGLKK-IPGFSEIDVGGRPCRFIAQDKTHSGSTDIYALLDLIAMDMK 475
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 179/486 (36%), Positives = 289/486 (59%), Gaps = 20/486 (4%)
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRA--NACKSSETNDTHSGKCLKLYKQMLCTG 132
L+ G LS A + + D+ ++ +I A A ++ E D +K ML G
Sbjct: 122 LAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDC--------FKNMLSEG 173
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
I+PD +T +L C++ D +G S++ V + G+ + ++I ++ CG AR
Sbjct: 174 IAPDDVTVIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAR 233
Query: 193 MLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
+FD + R SWNA+I GY + G +DVA LF +M+ R+I ++NS+ITG++ G+ R
Sbjct: 234 EVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLR 293
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EAL LF M+ + + D T+ S+LSACA LGA+ G+ +H + ++ D+ IG
Sbjct: 294 EALLLFMNMRRHDL----RVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIG 349
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
TAL+DMY KCG V A VF+ M K+D AWTAMI+ A NG GK + F +M +G +
Sbjct: 350 TALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQ 409
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
PN V+++ +L+AC+HS L+ +GR F MR +Y + P + HY CMID+L R+GL EA
Sbjct: 410 PNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMD 469
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
L+++MPM+P+ +W ++L C++H ++L + A++L+ ++P A YV L ++ + +
Sbjct: 470 LVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRK 529
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF--SMKGSPKVVKEELVLILNGLSKI 549
++D K R LM+ER ++K G SSV V G VH+F S K P+++ E++ +L +S
Sbjct: 530 WEDASKIRMLMEERQVKKTA-GYSSVTVAGQVHKFVVSDKSHPRIL--EIIAMLEEISHR 586
Query: 550 MKNGGF 555
+K+ G+
Sbjct: 587 LKSAGY 592
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 179/384 (46%), Gaps = 40/384 (10%)
Query: 107 ACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK-ECTKRLDGLVGASVYGQVVK 165
AC + T+ L+++M + PD TF FL K + R L+ ++ ++
Sbjct: 14 ACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLCTMLHAACLR 73
Query: 166 FGVCDDV-FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
+ FV NS+I ++ G R FDE+ +D VSW +I G + G L A
Sbjct: 74 TMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARL 133
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
L + R++ SW S+I + + RA+EA++ F+ M S E + PD +T+ VLSAC+
Sbjct: 134 LLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLS----EGIAPDDVTVIGVLSACS 189
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG---------------------- 322
L ++ G +H ++ G+ + AL+DMY KCG
Sbjct: 190 QLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWN 249
Query: 323 ------C----VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
C V+ A +F +M +D + + +MI+ + +G +EA F M +R
Sbjct: 250 AIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRV 309
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
++ T V LLSACA G + +GR + + LVE +Y ++D+ + G +EA +
Sbjct: 310 DNFTVVSLLSACASLGALPQGRALHACIE-LRLVETDIYIGTALLDMYMKCGRVNEATIV 368
Query: 433 IRSMPMEPDVFVWGALLGGCQMHG 456
+ M + DV W A++ G +G
Sbjct: 369 FQRMG-KRDVHAWTAMIAGLAFNG 391
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 193/421 (45%), Gaps = 40/421 (9%)
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
+I N+ S + H + + KQML G P +F LL K D +G ++G
Sbjct: 900 VISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHG 959
Query: 162 QVVKFGV-CDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
V K G C V VQ ++I ++ C + +F+E+ + + N++I L D
Sbjct: 960 IVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLGCNMFD 1019
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
AL++ M + E V PD +T ++ +
Sbjct: 1020 AALEILHCM-----------------------------------IVEGVTPDDVTFSATM 1044
Query: 281 SACAYLGA--IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
A + + + + +H L + G + D+ + ++L+ Y G + ++ +F+ + +
Sbjct: 1045 KAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPN 1104
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
+ +TA+IS A G G A + F +M + G++P++VTF+ ++ C +G+ E+GR
Sbjct: 1105 VICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIE 1164
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+MR ++P H+ACM+++LSR G EA ++ P+ W +LL C+ HG
Sbjct: 1165 LMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGEN 1224
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
LG++ A LID+ + A + + + + G + + + + + ++K G S +E
Sbjct: 1225 VLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKKS--GHSLIE 1282
Query: 519 V 519
V
Sbjct: 1283 V 1283
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 109/227 (48%), Gaps = 20/227 (8%)
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
M R++ S N +ITGF++ G A A +++ M +S + E T +++L C+ A
Sbjct: 695 MAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPH----TFSTILGVCSTYEA 750
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
+ +HG + GL C+ +G+ALV+ Y A +F+E+P ++ TAM +V
Sbjct: 751 LQ----LHGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQN----TAMCNV 802
Query: 349 FALNGYG-----KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG-LVEKGRWCFVMMRH 402
L G G +E F +M + + N +++ + C +G +E+GR ++
Sbjct: 803 -VLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLK 861
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
+ +++ ++D+ S G + + + + + DV W ++L
Sbjct: 862 AGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDI-LSEDVISWNSIL 907
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 138/325 (42%), Gaps = 41/325 (12%)
Query: 115 DTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV 174
D + + +Y+ M+ +GI TF +L C+ ++G+V+ G+C + FV
Sbjct: 713 DGLADRARAVYRWMVASGIRETPHTFSTILGVCST----YEALQLHGRVLALGLCCNPFV 768
Query: 175 QNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
+++++ +M V S +A AL LFR + +N
Sbjct: 769 GSALVNHYM------------------HVESPHA-------------ALSLFRELPLQNT 797
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA-IDHGK 293
N ++ G E + F +M+ +E + ++ + C G ++ G+
Sbjct: 798 AMCNVVLRGLGNLKLTEELICCFLDMRRQYLEL----NGLSYCYAMKGCYQNGEWLEQGR 853
Query: 294 WVHGYLRRSG-LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+HG + ++G + ++ + +LVD+Y G ++ +D ++W +++S++A
Sbjct: 854 QLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADR 913
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
G+ KEA ++M G P+ +FV LL+ +G + G ++ + V+
Sbjct: 914 GHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHV 973
Query: 413 YACMIDILSRAGLFSEAERLIRSMP 437
+ID+ + F + + +P
Sbjct: 974 QTTLIDMYGKCCCFDHSLAIFNEIP 998
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/516 (33%), Positives = 288/516 (55%), Gaps = 46/516 (8%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
++ + C L+ G ++ A +F + ++ ++N MI ++ D + +KL+
Sbjct: 236 VSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMI------ATYVQDLQVDEAVKLF 289
Query: 126 KQMLCTGISPDCLTFPFLLKECTK--RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
K+M D +++ ++ + +LD VY Q+ C D+ Q +++S +
Sbjct: 290 KKM----PHKDSVSWTTIINGYIRVGKLDE--ARQVYNQMP----CKDITAQTALMSGLI 339
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
G + A +F + DVV WN+MI GY RSG +D AL+LFR+M +N SWN++I+G
Sbjct: 340 QNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISG 399
Query: 244 FVQGGRAREALELFQEMQSSSV---------------------------EEMVKPDKITI 276
+ Q G+ A E+FQ M+ ++ +E KPD+ T
Sbjct: 400 YAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTF 459
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
A LSACA L A+ G +H Y+ +SG D+ +G AL+ MY KCG V+ A VF+++
Sbjct: 460 ACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIEC 519
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
D ++W ++IS +ALNGY +AF F +M +E V P+ VTF+G+LSAC+H+GL +G
Sbjct: 520 VDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDI 579
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F M + +EP HY+C++D+L R G EA +R M ++ + +WG+LLG C++H
Sbjct: 580 FKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHK 639
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
N+ELG A+ L +L+P N + Y+ L +M+A+AGR+++V++ R LM+ + K+ PGCS
Sbjct: 640 NLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQ-PGCSW 698
Query: 517 VEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
+EV + F K+ + + +ILN L+ M++
Sbjct: 699 IEVQNQIQHFLSHDPAKLRPKNIQIILNTLAAHMRD 734
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 168/355 (47%), Gaps = 42/355 (11%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D+ NS+++ + G + A F+ M+ R+VVSWN M+ GY++SGDL A LF ++
Sbjct: 172 DLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIP 231
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV-----------------------EE 267
N SW +++ G + G+ EA ELF M S +V ++
Sbjct: 232 NPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKK 291
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC-DVVIGTALVDMYGKCGCVER 326
M D ++ ++++ +G +D + V+ + + C D+ TAL+ + G ++
Sbjct: 292 MPHKDSVSWTTIINGYIRVGKLDEARQVY-----NQMPCKDITAQTALMSGLIQNGRIDE 346
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A +F + D + W +MI+ ++ +G EA + FR+M + N V++ ++S A
Sbjct: 347 ADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIK----NSVSWNTMISGYAQ 402
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME---PDVF 443
+G +++ F MR E ++ + +I + L+ +A + + M E PD
Sbjct: 403 AGQMDRATEIFQAMR-----EKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQS 457
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKK 497
+ L C +++G ++ +Y++ +N F N L MYAK GR ++
Sbjct: 458 TFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQ 512
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 216/479 (45%), Gaps = 50/479 (10%)
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
H +L+T L+ + + A +F + +L ++N MI + ++ +
Sbjct: 45 HKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMI------AGYLHNNMVEEA 98
Query: 122 LKLYKQMLCTGISPDCLTFPF-LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
+L+ M P+ F + L+ C R L A ++V + D N++I+
Sbjct: 99 SELFDVM------PERDNFSWALMITCYTRKGKLEKARELLELVPDKL--DTACWNAMIA 150
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
+ G A+ +F++M +D+VS+N+M+ GY ++G + +AL F M +RN+ SWN +
Sbjct: 151 GYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLM 210
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
+ G+V+ G A +LF E++ P+ ++ ++L A G + + + +
Sbjct: 211 VAGYVKSGDLSSAWQLF--------EKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMP 262
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
+VV A++ Y + V+ A +FK+MP KD+++WT +I+ + G EA
Sbjct: 263 SK----NVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQ 318
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
+ +M + + SGL++ GR + V + MI
Sbjct: 319 VYNQMPCKDITAQTALM---------SGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGY 369
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
SR+G EA L R MP++ V W ++ G G ++ ++ Q + + + ++ +
Sbjct: 370 SRSGRMDEALNLFRQMPIKNSV-SWNTMISGYAQAGQMDRATEIFQAMREKNIVS---WN 425
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKE-------VPGC---SSVEVDGVVHEFSMK 529
+L + + + D K+ +M + G + + + C ++++V +HE+ +K
Sbjct: 426 SLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILK 484
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 161/368 (43%), Gaps = 28/368 (7%)
Query: 172 VFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
F N I G V A +F M+++++V++N+MI ++ + A LF +M
Sbjct: 17 AFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSL 76
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
RN+ SWN++I G++ EA ELF + M + D + A +++ G ++
Sbjct: 77 RNLVSWNTMIAGYLHNNMVEEASELF--------DVMPERDNFSWALMITCYTRKGKLEK 128
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
+ + L D A++ Y K G A VF++MP KD +++ +M++ +
Sbjct: 129 AREL---LELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQ 185
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
NG A F M V V++ +++ SG + F + + P+
Sbjct: 186 NGKMHLALQFFESMTERNV----VSWNLMVAGYVKSGDLSSAWQLFEKIPN-----PNAV 236
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
+ M+ L++ G +EA L MP +V W A++ V+ K+ + +
Sbjct: 237 SWVTMLCGLAKYGKMAEARELFDRMP-SKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHK 295
Query: 472 DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHE----FS 527
D ++ + + + Y + G+ D+ ++ N M + I + S + +G + E FS
Sbjct: 296 DSVS---WTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFS 352
Query: 528 MKGSPKVV 535
G+ VV
Sbjct: 353 RIGAHDVV 360
>gi|297833228|ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330336|gb|EFH60755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 198/559 (35%), Positives = 303/559 (54%), Gaps = 78/559 (13%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL-SVSGSLS 82
K+ K IL + ++ C++M EL ++H +IKS ++ + ++RL+ FC + +LS
Sbjct: 2 KKHYKPIL-SQLENCRSMVELNQLHGLMIKSSVIR---NVIPLSRLIDFCTTCPETMNLS 57
Query: 83 YATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPF 142
YA +VF I +Y +N MIR +N + K L Y++ML G SPD TFP+
Sbjct: 58 YARSVFESIDCPSVYIWNSMIRG------YSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 111
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC----------------- 185
+LK C+ D G+ V+G VVK G +++V ++ ++M C
Sbjct: 112 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNWGLRVFEDIPKLN 171
Query: 186 ---------GFVTSARM-----LFDEMSN------------------------------R 201
GFV + R F EM +
Sbjct: 172 VVAWGSLISGFVNNNRFSDAIEAFREMQSIGVKPNETIMVDLLVACGRCFDPYCQSKFEF 231
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
+V+ ++I Y + GD+ A LF M +RN+ SWNSIITG+ Q G A EA+ +F +M
Sbjct: 232 NVILATSLIDMYAKCGDMRTARYLFDGMPERNLVSWNSIITGYSQNGDAEEAMCMFSDM- 290
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
++ + PDK+T SV+ A G G+ +H Y+ ++G D I ALV+MY K
Sbjct: 291 ---LDLGIAPDKVTFFSVIRASMIQGCSQLGQTIHAYVSKTGFVKDAAIVCALVNMYAKT 347
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGL 380
G E A +F+++ KKDT+AWT +I A +G+G +A F+ M+ EG P+ +T++G+
Sbjct: 348 GNAESAKKMFEDLEKKDTIAWTVVIIGLASHGHGNKALSIFQRMQEEGNATPDGITYLGV 407
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
L AC+H GLVE+G+ F MR +Y +EP V HY CM+DILSRAG F EAERL+++MP++P
Sbjct: 408 LYACSHIGLVEEGQRYFAEMRDLYGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVQP 467
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
+WGALL GC++H N++L +++ + + + L YV L ++YAKAGR+ DVK R
Sbjct: 468 TANIWGALLNGCEIHENLDLADRIRSMVSESEELGSGIYVLLSNIYAKAGRWADVKLIRE 527
Query: 501 LMKERGIRKEVPGCSSVEV 519
MK + + K + SSVE
Sbjct: 528 SMKSKRVDKLLAH-SSVET 545
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 185/520 (35%), Positives = 284/520 (54%), Gaps = 34/520 (6%)
Query: 56 CLQTNDHHSLITRLL---------FFCALSVSGSLSYATNVFSHIKRS----DLYTYNIM 102
C Q D H + R+ A + G + A +FS + S +L ++N M
Sbjct: 162 CNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGM 221
Query: 103 IRANACKSSETNDTHSG---KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
I HSG + + ++ M G PD T +L D ++G +
Sbjct: 222 I---------AGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+G V+K G+ D V +++I ++ C + +FD+M + DV S NA I G R+G +
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332
Query: 220 DVALDLFRRMKKR----NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
+ +L LFR++K + N+ SW S+I Q GR EALELF+EMQ + V KP+ +T
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGV----KPNSVT 388
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
I +L AC + A+ HGK H + R G+ DV +G+AL+DMY KCG ++ + F +P
Sbjct: 389 IPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIP 448
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
K+ + W A+I+ +A++G KEA + F M+ G +P+ ++F +LSAC+ SGL E+G +
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSY 508
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M Y +E V HYACM+ +LSRAG +A +IR MP+ PD VWGALL C++H
Sbjct: 509 YFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVH 568
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
NV LGE A+ L +L+P N Y+ L ++YA G +++V + R++MK +G+RK PGCS
Sbjct: 569 NNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN-PGCS 627
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+EV VH +++ L+ LS MK G+
Sbjct: 628 WIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGY 667
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/462 (29%), Positives = 216/462 (46%), Gaps = 62/462 (13%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
++ + ++ H I+K+ ND H L T+LL A ++ + AT V + +++++
Sbjct: 28 SLSQTRQAHAHILKTGLF--NDTH-LATKLLSHYANNMC--FADATLVLDLVPEPNVFSF 82
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA-S 158
+ +I A S+ + H L + QML G+ PD P +K C L L A
Sbjct: 83 STLIYA----FSKFHQFHHA--LSTFSQMLTRGLMPDNRVLPSAVKACAG-LSALKPARQ 135
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
V+G G D FVQ+S++ +++ C + A +FD M DVVSW+A++ Y R G
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGC 195
Query: 219 LDVALDLFRRMK----KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+D A LF M + N+ SWN +I GF G EA+ +F +M E PD
Sbjct: 196 VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE----PDGT 251
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
TI+SVL A L + G +HGY+ + GL D + +AL+DMYGKC C VF +M
Sbjct: 252 TISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQM 311
Query: 335 PKKD-----------------------------------TLAWTAMISVFALNGYGKEAF 359
D ++WT+MI+ + NG EA
Sbjct: 312 DHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEAL 371
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR--WCFVMMRHVYLVEPHVYHYACMI 417
+ FREM+ GV+PN VT LL AC + + G+ CF + R + VY + +I
Sbjct: 372 ELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG---ISTDVYVGSALI 428
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
D+ ++ G + +P + ++ W A++ G MHG +
Sbjct: 429 DMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMHGKAK 469
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 33/203 (16%)
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
++ + H ++ ++GL D + T L+ Y C A V +P+ + +++ +I
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC---------- 396
F+ A TF +M G+ P++ + ACA ++ R
Sbjct: 87 YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146
Query: 397 ---FVM--MRHVY---------------LVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FV + H+Y + EP V ++ ++ +R G EA+RL M
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206
Query: 437 ---PMEPDVFVWGALLGGCQMHG 456
++P++ W ++ G G
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSG 229
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 204/604 (33%), Positives = 302/604 (50%), Gaps = 104/604 (17%)
Query: 15 SPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIK-------------------SP 55
+PA S E +L+L + CK++RE+K+IH IIK +
Sbjct: 16 APAGSSANFHEFPQLLL---LSSCKSVREIKQIHASIIKANTTRSTTTLPIISLCTKITS 72
Query: 56 CLQTNDHHS-------LITRLLFFCAL-------SVSGSLSYATNVFSHI---------- 91
LQ + H + + L FC ++ SLS + N F+HI
Sbjct: 73 LLQQDVHLADSIQNLWYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLI 132
Query: 92 -KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
D YT +++A C S + L+++ + TG+S + +K R
Sbjct: 133 GLSPDTYTLPYLLKA--CSQSHAFI----EALQIHAHSIKTGLSSN-----LFVKNTLMR 181
Query: 151 LDGLVG-ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS---------- 199
+ G +V G D+ ++I + G+ + A F M+
Sbjct: 182 FYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTADRMTLVV 241
Query: 200 ----------------------------NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
+ DV NA++ YL+ G +A LF M
Sbjct: 242 VLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPV 301
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
+N+ SWNS+I+G G +EAL +F+ MQ+ + KPD +T+ VL++CA LG ++
Sbjct: 302 KNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGL----KPDSVTLVGVLNSCANLGDLEL 357
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
GKWVH Y+ ++ + D + ALVDMY KCG +++A+ VF+ M KD ++TAMI FA+
Sbjct: 358 GKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAM 417
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
+G A F EM GVRP+HVT VG+LSAC+H+GL+E+GR F M +Y ++P
Sbjct: 418 HGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTE 477
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
HY CM+D+L RAGL SEAE MP+ PD VWG+LLG C++H VELGE V Q LI++
Sbjct: 478 HYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEM 537
Query: 472 DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM--K 529
+P Y+ + ++Y+ A R+ D K R MK+ I+K PGCSS+EVDG+VHEF K
Sbjct: 538 EPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKK-TPGCSSIEVDGMVHEFRKGEK 596
Query: 530 GSPK 533
PK
Sbjct: 597 SHPK 600
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 288/497 (57%), Gaps = 50/497 (10%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
+R L+++H II S ++ SL+T+L+ + +GS++YA +F + D + ++
Sbjct: 104 LRNLQQVHAHIIVSGLHRSR---SLLTKLISL--VCTAGSITYARRLFPTVPNPDSFLFD 158
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+++ + K + DT + Y++ML +G TF ++K C +G ++
Sbjct: 159 SLLKVTS-KFGFSIDT-----VLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIH 212
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
V+ G D++VQ ++I+L Y ++ D+
Sbjct: 213 SHVMVCGYGSDMYVQAALIAL-------------------------------YAKASDMK 241
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
VA +F M +R I +WNS+I+G+ Q G +E++ LF M +E +PD TI S+L
Sbjct: 242 VAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM----MESGFQPDSATIVSLL 297
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
S+C+ LGA+D G W+H Y +G D +VV+GT+L++MY +CG V +A VF M +++ +
Sbjct: 298 SSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVV 357
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
WTAMIS + ++GYG++A + F EM A G RPN++TFV +LSACAHSGL++ GR F M
Sbjct: 358 TWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSM 417
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS-MPMEPDVFVWGALLGGCQMHGNVE 459
+ Y + P V H CM+D+ RAGL ++A + I+ +P EP VW ++LG C+MH N +
Sbjct: 418 KEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFD 477
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LG KVA++++ ++P N YV L ++YA AGR D V+ RN+M R ++K+V G S++E+
Sbjct: 478 LGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQV-GYSTIEI 536
Query: 520 DGVVHEFSM--KGSPKV 534
+ + FSM K P+
Sbjct: 537 NRKTYLFSMGDKSHPQT 553
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 292/522 (55%), Gaps = 46/522 (8%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+CK++R +K+I I K+ CL N + + +LL CA+++ SL YA +F I+ D+
Sbjct: 14 KCKSLRTVKQIQALIFKT-CL--NSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDV 70
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLV 155
+ YN +IR + + +N L+L+ +M ++ PD +F FLLK
Sbjct: 71 FMYNTLIRGLSDSDTPSN------ALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTN 124
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA------- 208
G ++ V +G+ +FV ++IS++ C + AR +FDEM ++V+WNA
Sbjct: 125 GLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFR 184
Query: 209 ------------------------MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
M+ GY ++G+L +A ++F +M ++ SW+++I GF
Sbjct: 185 CEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGF 244
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
G +A F+E++ E ++P+++++ VLSACA GA + G+ +HG++ +SG
Sbjct: 245 AHNGNFNDAFAFFREVR----REGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGF 300
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
+ + AL+D Y KCG ++ A VF M ++ ++WTAMI+ A++GYG+EA F E
Sbjct: 301 LQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNE 360
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
ME ++P+ +TF+ +L AC+H+GLV+ G F M + Y +EP + HY CM+D+ RAG
Sbjct: 361 MEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAG 420
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
+A + MP+ P+ VW LLG C +HGN+ L +V + L +LDP N +V L +
Sbjct: 421 KLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSN 480
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+YA AG++ DV R M + ++K PG S +EV+ +++ F
Sbjct: 481 IYAVAGKWKDVAALRRSMTHQRLKK-TPGWSMIEVNRIIYSF 521
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 274/488 (56%), Gaps = 18/488 (3%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRA---------NACKSSETNDTHSGKCLKLYKQMLCT 131
L++ T V H+++ D++ NA S + +L+++M+
Sbjct: 231 LTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSK 290
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVK----FGVCDDVFVQNSVISLFMACGF 187
I PD TF LL C L G SV+GQ ++ F + V N++++L+ G
Sbjct: 291 RIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGK 350
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+ A +FD M+ +DVVSWN ++ GY+ SG LD A +F+ M ++ SW +++G+V G
Sbjct: 351 IAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHG 410
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
G A +AL+LF +M+S E VKP T A ++AC LGA+ HGK +H +L + G +
Sbjct: 411 GLAEDALKLFNQMRS----EDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEAS 466
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
G AL+ MY +CG V+ A VF MP D+++W AMIS +G+G+EA + F +M A
Sbjct: 467 NSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVA 526
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
+G+ P+ ++F+ +L+AC H+GLV+ G F M + + P HYA +ID+L RAG
Sbjct: 527 QGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIG 586
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
EA LI++MP EP +W A+L GC+++G++ELG A L + P + Y+ L + Y+
Sbjct: 587 EARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYS 646
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
AGR+ D + R LM++RG++KE PGCS +EV VH F + + E+ L +
Sbjct: 647 AAGRWVDAARVRKLMRDRGVKKE-PGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVG 705
Query: 548 KIMKNGGF 555
M+ G+
Sbjct: 706 AKMRKLGY 713
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 148/570 (25%), Positives = 235/570 (41%), Gaps = 121/570 (21%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS------------------------ 76
+R L+ +H +++ + L H L RLL LS
Sbjct: 38 LRTLRCLHARLLTAALLHDPSHPHLTLRLLHLYTLSPDLATPAVLFRADPGPVAATSLVS 97
Query: 77 ---VSGSLSYATNVFSHIK--RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
V+G L + F + R D +N MI A A S + + +++ +L +
Sbjct: 98 AYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASL------AAPAVSVFRSLLAS 151
Query: 132 --GISPDCLTFPFLLKECTKRLDGLVG--ASVYGQVVKFGVCDDVFVQNSVISLFMAC-- 185
+ PD +F LL + D V ++ V K G + V N++I+L+M C
Sbjct: 152 DDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDA 211
Query: 186 -GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
G AR + DEM +D ++W +++G++R GD+ A F + WN++I+G+
Sbjct: 212 PGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGY 271
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
VQ G EA ELF+ M V + + PD+ T S+LSACA G HGK VHG R
Sbjct: 272 VQSGMCAEAFELFRRM----VSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQP 327
Query: 305 D----CDVVIGTALVDMYGK-------------------------------CGCVERAYG 329
D + + ALV +Y K GC++ A
Sbjct: 328 DFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAAR 387
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
+FKEMP K L+W M+S + G ++A F +M +E V+P T+ G ++AC G
Sbjct: 388 IFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGA 447
Query: 390 VEKGRWCFVMM----------------------------RHVYLVEPHV--YHYACMIDI 419
++ G+ + R V+LV P+V + MI
Sbjct: 448 LKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISA 507
Query: 420 LSRAGLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYL---IDLDP 473
L + G EA L M + PD + +L C G V+ G + + + + P
Sbjct: 508 LGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISP 567
Query: 474 LNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
Y L D+ +AGR + + R+L+K
Sbjct: 568 -GEDHYARLIDLLGRAGR---IGEARDLIK 593
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 177/502 (35%), Positives = 283/502 (56%), Gaps = 45/502 (8%)
Query: 69 LLFFCALSVSGSLSYATNVFSHIKRS-DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQ 127
+ + +L +SYA VFS I++ +++ +N +IR A E ++ S LY++
Sbjct: 57 IFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYA----EIGNSISA--FSLYRE 110
Query: 128 MLCTG-ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
M +G + PD T+PFL+K T D +G +++ V++ G ++VQNS++ L+ CG
Sbjct: 111 MRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG 170
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
V SA +F +M ++++ +WNS+I GF +
Sbjct: 171 DVASA-------------------------------YKVFDKMPEKDLVAWNSVINGFAE 199
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G+ EAL L+ EM S + KPD TI S+LSACA +GA+ GK VH Y+ + GL
Sbjct: 200 NGKPEEALALYTEMNSKGI----KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
++ L+D+Y +CG VE A +F EM K++++WT++I A+NG+GKEA + F+ ME
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 367 A-EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
+ EG+ P +TFVG+L AC+H G+V++G F MR Y +EP + H+ CM+D+L+RAG
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 375
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDM 485
+A I+SMPM+P+V +W LLG C +HG+ +L E ++ L+P + YV L +M
Sbjct: 376 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 435
Query: 486 YAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNG 545
YA R+ DV+K R M G++K VPG S VEV VHEF M + + L
Sbjct: 436 YASEQRWSDVQKIRKQMLRDGVKK-VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKE 494
Query: 546 LSKIMKNGGFGQYIRGLSMEAQ 567
++ +++ G+ I + ++ +
Sbjct: 495 MTGRLRSEGYVPQISNVYVDVE 516
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 287/497 (57%), Gaps = 50/497 (10%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
+R L+++H II S ++ SL+T+L+ + +GS++YA +F + D + ++
Sbjct: 40 LRNLQQVHAHIIVSGLHRSR---SLLTKLISL--VCTAGSITYARRLFPTVPNPDSFLFD 94
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+++ + K + DT + Y++ML +G TF ++K C +G ++
Sbjct: 95 SLLKVTS-KFGFSIDT-----VLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIH 148
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
V+ G D++VQ ++I+L Y ++ D+
Sbjct: 149 SHVMVCGYGSDMYVQAALIAL-------------------------------YAKASDMK 177
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
VA +F M +R I +WNS+I+G+ Q G +E++ LF M S + PD TI S+L
Sbjct: 178 VAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQ----PDSATIVSLL 233
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
S+C+ LGA+D G W+H Y +G D +VV+GT+L++MY +CG V +A VF M +++ +
Sbjct: 234 SSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVV 293
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
WTAMIS + ++GYG++A + F EM A G RPN++TFV +LSACAHSGL++ GR F M
Sbjct: 294 TWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSM 353
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS-MPMEPDVFVWGALLGGCQMHGNVE 459
+ Y + P V H CM+D+ RAGL ++A + I+ +P EP VW ++LG C+MH N +
Sbjct: 354 KEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFD 413
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LG KVA++++ ++P N YV L ++YA AGR D V+ RN+M R ++K+V G S++E+
Sbjct: 414 LGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQV-GYSTIEI 472
Query: 520 DGVVHEFSM--KGSPKV 534
+ + FSM K P+
Sbjct: 473 NRKTYLFSMGDKSHPQT 489
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 273/482 (56%), Gaps = 45/482 (9%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+C++M+ L+++H +I++ Q + ++ +++ FCA+S GS+ YA VF I+ D
Sbjct: 60 QCESMKHLEQLHAHVIQTGLEQ---NLFVMGKIIVFCAVSECGSMDYALRVFGKIENPDG 116
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+ +N MIR K + YK+M G D T+ FL+K C + L+G
Sbjct: 117 FLWNTMIRGLG------RTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLG 170
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++ V+K G+ + VFV+N+++ ++ G +
Sbjct: 171 KQIHCNVLKHGLEEHVFVRNTLVHMY-----------------------------GMFK- 200
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
D++ A LF M K + +WN+II V GR +EA+ELF M S + KPD T
Sbjct: 201 -DIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGL----KPDDATF 255
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
LSACA LG +D G+ VH + +GL V + +L+DMY KCG VE AY +F +M
Sbjct: 256 VVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKG 315
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
++ ++W MI A++G+G EA + F +M E + PN VTF+G+L AC+H G+VE+GR
Sbjct: 316 RNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRR 375
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F +MR Y ++P + HY M+DIL RAGL EA RLI+SMP+E + VW LL C++H
Sbjct: 376 YFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVH 435
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
GN+EL E+V Q L++L+P + + YV L +MYA AG+++ V + R M RG++K PG S
Sbjct: 436 GNLELAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNKVXRVRKSMHIRGVQKPKPGNS 495
Query: 516 SV 517
+
Sbjct: 496 YI 497
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 43/270 (15%)
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV-VIGTALVD-MYGKCGCVERAYGVFKE 333
+ SV C ++ H + +H ++ ++GL+ ++ V+G +V +CG ++ A VF +
Sbjct: 54 VMSVFKQCE---SMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMDYALRVFGK 110
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG--LVE 391
+ D W MI ++AF+ ++ M+ +G ++ T+ L+ C G L+
Sbjct: 111 IENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLG 170
Query: 392 KGRWCFVMM----RHVYLVEPHVYHYACMIDILSRAGLFSEAE----------------- 430
K C V+ HV++ V+ Y DI + LF E
Sbjct: 171 KQIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYC 230
Query: 431 -----------RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFY 479
R+++S ++PD + L C G +++G +V ID L +
Sbjct: 231 GRYKEAIELFFRMLQS-GLKPDDATFVVTLSACAALGELDIGRRV-HSCIDHTGLGNVVS 288
Query: 480 V--NLCDMYAKAGRFDDVKKTRNLMKERGI 507
V +L DMYAK G + + N MK R I
Sbjct: 289 VSNSLIDMYAKCGVVEAAYEIFNKMKGRNI 318
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 177/460 (38%), Positives = 262/460 (56%), Gaps = 44/460 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L +A +F + DL ++N +I C S+ N + L+L+ M I D +
Sbjct: 73 GQLGFAQKMFDGMLDRDLVSWNTLI----CGYSQYNKYK--EVLRLFDAMTAANIKADAV 126
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T ++ C+ D S+ + + + DV++ N++I ++ G +T+AR LFD M
Sbjct: 127 TMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNM 186
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
RDV+SW +MI GY Q + +A++LFQ
Sbjct: 187 PKRDVISWTSMITGY-------------------------------SQASQFSDAVKLFQ 215
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM ++ VKPDK+T+ASVLSACA+LG +D G VH Y+RR G+ D+ +G +L+DMY
Sbjct: 216 EMMAAK----VKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMY 271
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG VE+A VF M KD+++WT++IS A+NG+ A D F +M EGV+P H TFV
Sbjct: 272 CKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFV 331
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L ACAH+GLV KG F M V+ + P + HY C++D+LSR+G +A I+ MP+
Sbjct: 332 GILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPI 391
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
PDV VW LL C++HGNV L E + L++LDP + YV L + YA R+DD K
Sbjct: 392 VPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKM 451
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
R LM++ ++K G SS+EVDG+V +S + P +++ E
Sbjct: 452 RELMEDSDVQKP-SGSSSIEVDGMVSNYSQE--PGLLQVE 488
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 137/250 (54%), Gaps = 6/250 (2%)
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
NA+I Y G L A +F M R++ SWN++I G+ Q + +E L LF M +++
Sbjct: 63 NALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAAN-- 120
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+K D +T+ ++ AC++LG + + Y++ + L+ DV +G L+DMYG+ G +
Sbjct: 121 --IKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTA 178
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A +F MPK+D ++WT+MI+ ++ +A F+EM A V+P+ VT +LSACAH
Sbjct: 179 ARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAH 238
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
G ++ G W + V+ +Y +ID+ + G+ +A + M + D W
Sbjct: 239 LGKLDVG-WAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMK-DKDSVSWT 296
Query: 447 ALLGGCQMHG 456
+++ G ++G
Sbjct: 297 SVISGLAVNG 306
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 17/225 (7%)
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
+H + + G + + + AL+ MY CG + A +F M +D ++W +I ++
Sbjct: 46 IHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNK 105
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV--MMRHVYL--VEPHV 410
KE F M A ++ + VT V ++ AC+H G W F M++++ +E V
Sbjct: 106 YKEVLRLFDAMTAANIKADAVTMVKIILACSH-----LGDWEFADSMVKYIKENNLEIDV 160
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG----CQMHGNVELGEKVAQ 466
Y +ID+ R G + A +L +MP + DV W +++ G Q V+L +++
Sbjct: 161 YLGNTLIDMYGRLGNLTAARKLFDNMP-KRDVISWTSMITGYSQASQFSDAVKLFQEMMA 219
Query: 467 YLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
+ D + A ++ C A G+ D + ++ G++ ++
Sbjct: 220 AKVKPDKVTVASVLSAC---AHLGKLDVGWAVHHYIRRHGVQADI 261
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 292/521 (56%), Gaps = 57/521 (10%)
Query: 27 TKLILRNAIDECKNMRE---------LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV 77
T ++L +++C N+ + L++IH I+ + +D + + +L
Sbjct: 7 TSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRH-GVSISDAELGKHLIFYLVSLPS 65
Query: 78 SGSLSYATNVFSHIKRS-DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISP 135
+SYA VFS I++ +++ +N +IR A E ++ S LY++M +G + P
Sbjct: 66 PPPMSYAHKVFSKIEKPINVFIWNTLIRGYA----EIGNSISA--FSLYREMRVSGLVEP 119
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D T+PFL+K T D +G +++ V++ G ++VQNS++ L+ CG V SA
Sbjct: 120 DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASA---- 175
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
+F +M ++++ +WNS+I GF + G+ EAL
Sbjct: 176 ---------------------------YKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
L+ EM S + KPD TI S+LSACA +GA+ GK VH Y+ + GL ++ L+
Sbjct: 209 LYTEMNSKGI----KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 264
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA-EGVRPNH 374
D+Y +CG VE A +F EM K++++WT++I A+NG+GKEA + F+ ME+ EG+ P
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 324
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+TFVG+L AC+H G+V++G F MR Y +EP + H+ CM+D+L+RAG +A I+
Sbjct: 325 ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIK 384
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
SMPM+P+V +W LLG C +HG+ +L E ++ L+P + YV L +MYA R+ D
Sbjct: 385 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 444
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM--KGSPK 533
V+K R M G++K VPG S VEV VHEF M K P+
Sbjct: 445 VQKIRKQMLRDGVKK-VPGHSLVEVGNRVHEFLMGDKSHPQ 484
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 171/460 (37%), Positives = 267/460 (58%), Gaps = 12/460 (2%)
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
L YN MI S N + L++ ++M+ +GI D T+P +++ C +
Sbjct: 251 LVAYNAMI------SGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQL 304
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G V+ V++ F NS+++L+ CG AR +F++M +D+VSWNA++ GY+
Sbjct: 305 GKQVHAYVLRREDFSFHF-DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVS 363
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
SG + A +F+ MK++NI SW +I+G + G E L+LF M+ E P
Sbjct: 364 SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE----PCDYA 419
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ + +CA LGA +G+ H L + G D + G AL+ MY KCG VE A VF+ MP
Sbjct: 420 FSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMP 479
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
D+++W A+I+ +G+G EA D + EM +G+RP+ +TF+ +L+AC+H+GLV++GR
Sbjct: 480 CLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRK 539
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M VY + P HYA +ID+L R+G FSEAE +I S+P +P +W ALL GC++H
Sbjct: 540 YFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVH 599
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
GN+ELG A L L P + Y+ L +MYA G++++V + R LM++RG++KEV CS
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEV-ACS 658
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+E++ VH F + + E + L L K M+ G+
Sbjct: 659 WIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGY 698
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 161/354 (45%), Gaps = 56/354 (15%)
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+R + +V+G ++ FG + N +I ++ + AR LFDE+S D ++
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTT 85
Query: 209 MIIGYLRSGDLDVALDLFRR--MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
M+ GY SGD+ +A +F + R+ +N++ITGF A+ LF +M+
Sbjct: 86 MVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMK----H 141
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGK---WVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
E KPD T ASVL+ A + +D K H +SG + ALV +Y +C
Sbjct: 142 EGFKPDDFTYASVLAGLALV--VDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCAS 199
Query: 324 ----VERAYGVFKEMPKKDTLAWTAMISVFALNG---YGK-------------------- 356
+ A VF ++P+KD +WT M++ + NG GK
Sbjct: 200 SPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMIS 259
Query: 357 ---------EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV- 406
EA + R M + G+ + T+ ++ ACA++ L++ G+ H Y++
Sbjct: 260 GYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQV-----HAYVLR 314
Query: 407 -EPHVYHY-ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
E +H+ ++ + + G F+EA + MP + D+ W ALL G G++
Sbjct: 315 REDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSGYVSSGHI 367
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 256/441 (58%), Gaps = 12/441 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF ++R D++T+ MI S + + L L+ M G D
Sbjct: 214 GMVDEARKVFDVVERKDVFTWTAMI------SCFQRNGKFAEALALFSDMRGEGWPVDEA 267
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
++ C + G +G + G+ + VQN++I ++ + V +AR LFD
Sbjct: 268 VMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSG 327
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D SWN+MI GYL++G + A +LF M ++ SW ++I+G VQ ++ EAL +F
Sbjct: 328 QCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFN 387
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
MQ+ + KPD++T+ SV+SAC + +++ GK +H Y+R V++GT+L+DMY
Sbjct: 388 NMQAQGI----KPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMY 443
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV-RPNHVTF 377
KCGC+E A VF M ++ T W A+I A+NG ++ D F EME+ PN +TF
Sbjct: 444 MKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITF 503
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
G+LSAC H+GLVE+G+ F +M+H Y + P++ HY CM+D+L RAG EAE LI SMP
Sbjct: 504 TGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMP 563
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M PDV WGALLG C HG+ E+GE+V + L++LDP + F+ L ++YA G + VK
Sbjct: 564 MSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKD 623
Query: 498 TRNLMKERGIRKEVPGCSSVE 518
R MK+ + K +PG S VE
Sbjct: 624 LRGSMKQWHVPK-IPGSSVVE 643
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 148/590 (25%), Positives = 253/590 (42%), Gaps = 125/590 (21%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS--VSGSLSYA 84
T +L + C + R L +IH Q + S L +RL+ F + + ++
Sbjct: 3 TVTLLDAHLARCSSARHLLQIHAQFVASGLLADA---FAASRLILFTTSTRLLPLPFHHS 59
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
+ + R + ++ N++++A + E H CL LY M +PDC T L
Sbjct: 60 LRLLHVVHRPNAFSCNMVLKA----AREHGLPH--LCLPLYASM---SAAPDCYTHTILA 110
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
C R G V+ V+ G ++++ N+++S++ ACG + AR +FD D V
Sbjct: 111 AACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAV 170
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKR-------------------------------N 233
SWN ++ Y+++ D+D A+ +F RM +R +
Sbjct: 171 SWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVERKD 230
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
+F+W ++I+ F + G+ EAL LF +M+ E D+ + V++ACA L +G+
Sbjct: 231 VFTWTAMISCFQRNGKFAEALALFSDMRG----EGWPVDEAVMVCVVAACARLEVTRNGE 286
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMY---------------GKC----------------G 322
HG R+GL + + AL+ MY G+C G
Sbjct: 287 MCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNG 346
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
V+ A +F MP KD ++WT MIS N EA F M+A+G++P+ VT V ++S
Sbjct: 347 SVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVIS 406
Query: 383 ACAHSGLVEKGRWCFVMMR-HVYLVEPHVYHYACMIDILSRAGLFSEA--------ER-- 431
AC + +E+G+ +R H Y + V +ID+ + G A ER
Sbjct: 407 ACTNMSSLEQGKSMHEYIREHQYTIT--VILGTSLIDMYMKCGCLESALEVFDTMEERGT 464
Query: 432 ---------------LIRSMPM----------EPDVFVWGALLGGCQMHGNVELGE---K 463
+++S+ M P+ + +L C+ G VE G+ K
Sbjct: 465 PCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFK 524
Query: 464 VAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
+ Q+ + P N Y + D+ +AG VK+ NL++ + +VP
Sbjct: 525 LMQHKYHIIP-NIRHYGCMVDLLGRAGY---VKEAENLIESMPMSPDVPA 570
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 166/446 (37%), Gaps = 123/446 (27%)
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
++ Q V G+ D F + +I F TS R+L +
Sbjct: 23 IHAQFVASGLLADAFAASRLIL------FTTSTRLLPLPFHH------------------ 58
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+L L + + N FS N ++ + G L L+ M ++ PD T
Sbjct: 59 ---SLRLLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASMSAA-------PDCYTHTI 108
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC--------------- 323
+ +ACA AI+ G+ VH + R G ++ + AL+ MY CGC
Sbjct: 109 LAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWD 168
Query: 324 ----------------VERAYGVFKEMP-------------------------------K 336
V++A GVF MP +
Sbjct: 169 AVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVER 228
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD WTAMIS F NG EA F +M EG + V +++ACA + G C
Sbjct: 229 KDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMC 288
Query: 397 FVMMRHVYL-----VEPHVYH-YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
+ L V+ + H Y+ +++++ LF + L D F W +++
Sbjct: 289 HGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCL--------DQFSWNSMIA 340
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
G +G+V+ +++ + D D ++ ++ C + + + N M+ +GI+ +
Sbjct: 341 GYLKNGSVKDAKELFTVMPDKDNVSWTTMISGC---VQNDQSSEALTIFNNMQAQGIKPD 397
Query: 511 -------VPGC---SSVEVDGVVHEF 526
+ C SS+E +HE+
Sbjct: 398 EVTLVSVISACTNMSSLEQGKSMHEY 423
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 180/519 (34%), Positives = 283/519 (54%), Gaps = 22/519 (4%)
Query: 12 LLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF 71
LL S A +S L L + C +M L+++H ++KS + S R +
Sbjct: 20 LLPSSASISAFIASDPALTLLHT--RCVSMAHLRQLHAALVKSGLAKDPIAAS---RAVA 74
Query: 72 FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
FCA L YA + H R + + +N +IRA ++ + L+ ML +
Sbjct: 75 FCAGPGRDVL-YAERLVRHHPRPNSFMWNTVIRA------LSDGARPDAAVALFVDMLSS 127
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
PD +FP LL + G +++G +K G+ D +V+N+ I+++ +CG A
Sbjct: 128 PTPPDRRSFPSLLAAYARLGRAGDGEALHGMALKLGLAGDAYVRNATIAMYASCGRADEA 187
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
LF + DVV+ N++I+ R+G +D A +F M +R + +W+++++ + + R
Sbjct: 188 LALFGQCPELDVVACNSVIVALARAGRVDEARSVFDAMPERTVATWSAMVSAYARAARCS 247
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EAL LF MQ+ +E P+ + SVL CA LGA+ G WVH Y+ R G+ + ++
Sbjct: 248 EALALFSAMQADGME----PNANVLVSVLGCCASLGALVQGAWVHEYIDRHGVAMNALVV 303
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLA----WTAMISVFALNGYGKEAFDTFREMEA 367
TALVDMY KCG V+ A VF + + LA W +M+ A++G +EA F E+++
Sbjct: 304 TALVDMYCKCGSVDDARQVF-DAARSQGLAKLSSWNSMMQGLAVHGQWREAVALFSELKS 362
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
G+ P++VTF+ +L+A HSG+ ++ + F M + VEP + HY C++D L+RAG
Sbjct: 363 YGLSPDNVTFIAVLTAYGHSGMPDEAQAAFASMSSEHGVEPGIEHYGCLVDALARAGRLR 422
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
EAE IR+MPM PD +WGALL GC++HG+ ELG + A+ + DP + YV + A
Sbjct: 423 EAEDAIRAMPMAPDAAIWGALLSGCRLHGDAELGARAAREAVRCDPRDSGAYVLAASVLA 482
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ G R M+E G+ K VPG S +EV+GVVHEF
Sbjct: 483 RGGDPGRGAGIRGRMREAGVGK-VPGSSMIEVNGVVHEF 520
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 262/441 (59%), Gaps = 12/441 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF + D++T+ MI E ND + + L ++ M D
Sbjct: 214 GMVDEARRVFDAAECRDIFTWTAMI-----SCFERNDMFA-EALHVFSCMRRERWHVDEP 267
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
++ C + G +G V++ G+C V VQN++I ++ +C V +AR LFD
Sbjct: 268 LMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSG 327
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D SWN+MI GYL++G + A+ LF M ++ SW+++I+G VQ ++ +AL +F
Sbjct: 328 ECLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFD 387
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
MQ+ + +PD++TI SV+SAC L A++ GK VH Y++++ +V+GT+L++MY
Sbjct: 388 NMQAQGI----RPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLGTSLINMY 443
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA-EGVRPNHVTF 377
KCGC+E A F M +K T W A+I A+NG ++ D F EMEA + PN +TF
Sbjct: 444 MKCGCLEAALEAFNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEMEASDTATPNEITF 503
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
G+LSAC H+GLV++GR F +M+H Y + P++ HY CM+D+L RAG EAE +I+SMP
Sbjct: 504 TGVLSACRHAGLVDEGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKEAEDMIQSMP 563
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M PDV WGALLG C HG E+GE+V + L++ DPL+ F L ++YAK G + V
Sbjct: 564 MSPDVPAWGALLGACWKHGEYEVGERVGRKLVNRDPLHDGFQTMLSNIYAKEGMWQSVDD 623
Query: 498 TRNLMKERGIRKEVPGCSSVE 518
R MK+R ++K V G S V+
Sbjct: 624 LRGSMKQRHVQK-VSGHSVVK 643
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 214/500 (42%), Gaps = 90/500 (18%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS--VSGSLSYA 84
T +L + C + R L +IH Q I S L +RLL F + S + ++
Sbjct: 3 TVSLLDAHLARCCSARHLLQIHAQFIASGLLADA---FAASRLLLFTSASRLLPLPFHHS 59
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
+ ++ + ++ N +++ S CL LY + PD T P L
Sbjct: 60 LRLLRLVRYPNAFSCNTLLK------SALIGGMPHLCLPLYASL---PAPPDSYTHPILA 110
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
C R D + G V+ V G D+++++N++I ++ ACG + AR +FD D V
Sbjct: 111 AACASRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRVFDAGPVWDAV 170
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKRN------------------------------- 233
SWN ++ Y+ +GD+D A+++F +M KRN
Sbjct: 171 SWNTILAAYVHAGDVDQAVEVFAQMPKRNATAVSSMVSLFGRRGMVDEARRVFDAAECRD 230
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
IF+W ++I+ F + EAL +F M+ E D+ + SV+SACA I +G+
Sbjct: 231 IFTWTAMISCFERNDMFAEALHVFSCMR----RERWHVDEPLMVSVVSACAQSEVIQNGQ 286
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKC-------------------------------G 322
HG + R+GL V + AL+ MY C G
Sbjct: 287 MCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNG 346
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
V+ A +F MP KD ++W+ +IS N +A F M+A+G+RP+ VT V ++S
Sbjct: 347 HVKDAMALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVIS 406
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY----ACMIDILSRAGLFSEAERLIRSMPM 438
AC + +EKG+ H Y+ + Y +I++ + G A M
Sbjct: 407 ACTNLSALEKGK-----SVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEAALEAFNIME- 460
Query: 439 EPDVFVWGALLGGCQMHGNV 458
E W A++ G M+G V
Sbjct: 461 EKGTPCWNAVIVGLAMNGLV 480
>gi|186478293|ref|NP_172391.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099767|sp|O80488.1|PPR23_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09190
gi|3249103|gb|AAC24086.1| Contains similarity to membrane-associated salt-inducible protein
homolog TM021B04.10 gb|2191192 from A. thaliana BAC
gb|AF007271 [Arabidopsis thaliana]
gi|28393182|gb|AAO42022.1| unknown protein [Arabidopsis thaliana]
gi|332190289|gb|AEE28410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 484
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 179/471 (38%), Positives = 275/471 (58%), Gaps = 23/471 (4%)
Query: 44 LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS---YATNVFSHIKRSDLYTYN 100
L EIH +++ H + LL +S+ GSLS YA VFSHI+ ++ +N
Sbjct: 20 LPEIHAHLLR--------HFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFN 71
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
MI+ C S S L + M GI D T+ LLK C+ D G V+
Sbjct: 72 AMIK---CYSLVGPPLES---LSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVH 125
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G++++ G ++ V+ L+ + G + A+ +FDEMS R+VV WN MI G+ SGD++
Sbjct: 126 GELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVE 185
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
L LF++M +R+I SWNS+I+ + GR REALELF EM +++ PD+ T+ +VL
Sbjct: 186 RGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM----IDQGFDPDEATVVTVL 241
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCD-VVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
A LG +D GKW+H SGL D + +G ALVD Y K G +E A +F++M +++
Sbjct: 242 PISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++W +IS A+NG G+ D F M EG V PN TF+G+L+ C+++G VE+G F
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+M + +E HY M+D++SR+G +EA + +++MP+ + +WG+LL C+ HG+V
Sbjct: 362 LMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDV 421
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
+L E A L+ ++P N YV L ++YA+ GR+ DV+K R LMK+ +RK
Sbjct: 422 KLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRK 472
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 303/546 (55%), Gaps = 47/546 (8%)
Query: 13 LNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFF 72
+N+ S PN + + + C + +L +IHT I+K L +++ ++T+
Sbjct: 14 INNVLASSTPNPRAPEQNCLALLQACNALPKLTQIHTHILK---LGLHNNPLVLTKFASI 70
Query: 73 CAL--SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
+L + + S+ + + + D + +N +IRA A ++ + D K L LY ML
Sbjct: 71 SSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYA-QTGHSKD----KALALYGIMLH 125
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC-GFVT 189
I P+ T+PF+LK C +G +V+G VVKFG D+ VQN+++ ++ C G +
Sbjct: 126 DAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGIN 185
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
SAR +FDEM D V +W+++I G+ + GR
Sbjct: 186 SARKVFDEMPKSDSV-------------------------------TWSAMIGGYARVGR 214
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
+ EA+ LF+EMQ + V PD+IT+ S+LSAC LGA++ GKW+ Y+ R + V
Sbjct: 215 STEAVALFREMQMAEV----CPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVE 270
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+ AL+DM+ KCG + +A +F+ M +K ++WT++I A++G G+EA F EM + G
Sbjct: 271 VSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSG 330
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
V P+ V F+GLLSAC+HSGLVE+GR F M Y + P + HY CM+D+ R GL EA
Sbjct: 331 VAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEA 390
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
+R+MP+EP+ + L+ C+ HG +LGEK+ + L+ +PL+ + YV L ++YAK
Sbjct: 391 LEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKT 450
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
++ K R +M+ +G++K VPG + +E+D ++EF +E+ +++ + +
Sbjct: 451 LSWEKKTKIREVMEVKGMKK-VPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGRE 509
Query: 550 MKNGGF 555
MK G+
Sbjct: 510 MKKSGY 515
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 194/560 (34%), Positives = 297/560 (53%), Gaps = 81/560 (14%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
P N S+ + I CK + L + H II Q H +I+ L S+S S
Sbjct: 2 PLNLSSSNPSISLLIKSCKTIPHLHQFHAHIIHKGLEQD---HFIISHFL-----SISTS 53
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
+SY+T++F+ + + YNI+++ + K+S+ DT S Y+ D T+
Sbjct: 54 VSYSTSIFNRLLNPSTFLYNILLKIFS-KNSQFIDTFS----LFYRMKQSEYALSDKYTY 108
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
P L+K C+ L G V+G ++ GV DDV+V +S+IS + C + SAR +FDE+
Sbjct: 109 PLLIKVCSNELRLKEGEIVHGSAIRCGVSDDVYVGSSLISFYGKCKEILSARKVFDEIPE 168
Query: 201 RDVVS-------------------------------WNAMIIGYLRSGDLDVALDLFRRM 229
R+VVS WNAMI G ++GDL A +F M
Sbjct: 169 RNVVSWTAMVAGYASVGDLENAKRVFERMPERNLPSWNAMISGLGKAGDLSGARKVFDEM 228
Query: 230 KKRNIFS-------------------------------WNSIITGFVQGGRAREALELFQ 258
+RN+ S W+++I+G+ + + EA+++F
Sbjct: 229 VERNVVSFTVMIDGYAKVGDMASARALFDEAPEKDVVAWSALISGYSRNEQPNEAVKIFF 288
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC-DVVIGTALVDM 317
EM S +V KPD+ + S++SAC+ LG D KWV YL ++ +D + AL+DM
Sbjct: 289 EMVSMNV----KPDEFIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDTRQAHVLAALIDM 344
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
+ KCG +E+A +F++MP +D + ++I +++G G EA + F M EG+ P+ V F
Sbjct: 345 HAKCGNMEKAVKLFQDMPSRDLIPCCSLIQGLSIHGRGVEAVELFNRMLDEGLIPDTVAF 404
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+L+AC+ GL+E G F M++ Y V P HYACM+D+LSRAG A L++SMP
Sbjct: 405 TVILTACSRGGLIEDGWHFFDTMKNKYSVVPSPNHYACMVDLLSRAGQLRAAYDLLKSMP 464
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
++P WGALLG C++HG+VEL E+VA L++L+P YV L ++YA A ++ DV
Sbjct: 465 LKPHACAWGALLGACKLHGDVELREEVANRLLELEPEKAGSYVLLSNIYASANQWLDVSI 524
Query: 498 TRNLMKERGIRKEVPGCSSV 517
R+ MKERGIRK +PGCS +
Sbjct: 525 VRDEMKERGIRK-IPGCSYI 543
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 277/512 (54%), Gaps = 19/512 (3%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M +K++H +++ +T D L+ RLL +L YA +F H + S + YN
Sbjct: 1 MNGIKQLHAHCLRTGVDETKD---LLQRLLLI------PNLVYARKLFDHHQNSCTFLYN 51
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+I+A + + LY + G+ P TF F+ ++
Sbjct: 52 KLIQAYYVHH------QPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLH 105
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
Q + G D F ++I+ + G + AR +FDEMS RDV WNAMI GY R GD+
Sbjct: 106 SQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMK 165
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A++LF M ++N+ SW ++I+GF Q G EAL++F M+ ++ VKP+ IT+ SVL
Sbjct: 166 AAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEK---DKSVKPNHITVVSVL 222
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
ACA LG ++ G+ + GY R +G ++ + A ++MY KCG ++ A +F+E+ + L
Sbjct: 223 PACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNL 282
Query: 341 -AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+W +MI A +G EA F +M EG +P+ VTFVGLL AC H G+V KG+ F
Sbjct: 283 CSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKS 342
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M V+ + P + HY CMID+L R G EA LI++MPM+PD VWG LLG C HGNVE
Sbjct: 343 MEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVE 402
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
+ E ++ L L+P N V + ++YA ++D V + R LMK+ + K VEV
Sbjct: 403 IAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEV 462
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
VH+F+++ E+ +L + + MK
Sbjct: 463 GVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 193/567 (34%), Positives = 296/567 (52%), Gaps = 65/567 (11%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH------- 90
C ++ LK IH+ + L H + RL+ S G L A +F H
Sbjct: 35 CTSLTTLKLIHSSLSTRGFLLHTPH--FLARLIIL--YSKLGDLHSARTLFDHRHHHHHG 90
Query: 91 -IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
+ + + N M+RA A N S + + LY M G+ + T+PF+LK C
Sbjct: 91 HTQAPNSFLCNTMLRAYA------NAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS 144
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
L + G V+GQVV+ G D+FV+ +++ ++ CG + A +FD M RDVV W AM
Sbjct: 145 ELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAM 204
Query: 210 IIGYLRSGDLDVALDLFR---------------------------------------RMK 230
I Y ++ AL LFR RM+
Sbjct: 205 ITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRME 264
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+RN SWNS+++G+ Q GR +AL LF +MQ+S + P+ +T ++SAC+YLG+
Sbjct: 265 ERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECD----PNPVTALIMVSACSYLGSKH 320
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK--EMPKKDTLAWTAMISV 348
G+ +H ++ S +D D + A++DMY KCG ++ A +F E+ ++D +W +IS
Sbjct: 321 LGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISG 380
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
+ ++G+GKEA + F M+ EGV PN +TF +LSAC+H+GL+++GR CF M + V P
Sbjct: 381 YGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLS-VRP 439
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ HYACM+D+L RAG +EA RLI+ +P P VWGALL C++HGN ELGE A L
Sbjct: 440 EMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNL 499
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM 528
L+P + +YV + ++YA + ++ +V+ R MK RG++K S +E VH F
Sbjct: 500 FQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPA-AFSVIEFGTEVHGFHT 558
Query: 529 KGSPKVVKEELVLILNGLSKIMKNGGF 555
E+ + L+ MK G+
Sbjct: 559 ADQSSPYYREVYRKVESLAIEMKMVGY 585
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 157/344 (45%), Gaps = 36/344 (10%)
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNA-----MIIGYLRSGDLDVALDLF--------R 227
L C +T+ +++ +S R + +II Y + GDL A LF
Sbjct: 31 LLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHG 90
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY-L 286
+ N F N+++ + GR+ EA++L+ MQ V + T VL CA L
Sbjct: 91 HTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGV----GVNNFTYPFVLKVCASEL 146
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
GA+ G+ VHG + R+G D+ + ALVDMY KCG + A+ VF M +D + WTAMI
Sbjct: 147 GAV-FGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMI 205
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY-- 404
+++ +A FR+M+ EG + +T + + SA G GR R V+
Sbjct: 206 TLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLG---DGRMAISRARLVFDR 262
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM---EPDVFVWGALLGGCQMHGNVELG 461
+ E + + M+ ++ G ++A L M +P+ ++ C G+ LG
Sbjct: 263 MEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLG 322
Query: 462 EKVAQYLI----DLD-PLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
K+ ++I D+D L +A + DMY K G D + N
Sbjct: 323 RKLHNFVISSKMDIDTTLRNA----IMDMYMKCGDLDTAVEMFN 362
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 262/455 (57%), Gaps = 43/455 (9%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
VF + DL ++N ++ S + G+ +++ QML G P+ TF +
Sbjct: 206 GNKVFEAMTNPDLVSWNALL------SGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISV 259
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
L+ C+ LD G V+ ++K DD FV +++ ++ + A + FD + NRD
Sbjct: 260 LRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRD- 318
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
IFSW II+G+ Q +A +A++ F++MQ
Sbjct: 319 ------------------------------IFSWTVIISGYAQTDQAEKAVKYFRQMQ-- 346
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
E +KP++ T+AS LS C+++ +++G+ +H ++G D+ +G+ALVD+YGKCGC
Sbjct: 347 --REGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGC 404
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
+E A +FK + +D ++W +IS ++ +G G++A + FR M +EG+ P+ TF+G+LSA
Sbjct: 405 MEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSA 464
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+ GLVE+G+ F M +Y + P + HYACM+DIL RAG F+E + I M + P
Sbjct: 465 CSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSL 524
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+W +LG C++HGNV+ GEK A+ L +++P+ + Y+ L +++A GR+DDV+ R LM
Sbjct: 525 IWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMT 584
Query: 504 ERGIRKEVPGCSSVEVDGVVHEF-SMKGSPKVVKE 537
RGI+KE PGCS VEVDG VH F S GS ++E
Sbjct: 585 SRGIKKE-PGCSWVEVDGQVHVFLSQDGSHPKIRE 618
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 196/443 (44%), Gaps = 65/443 (14%)
Query: 27 TKLILRNAIDECKN---MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL----SVSG 79
+K L + C N +RE K +H ++S C I L C+L S G
Sbjct: 50 SKFTLSTVLKGCANTGSLREGKVLHALALRSGCE--------IDEFLG-CSLVDMYSKCG 100
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
++ A VF+ I+ D+ ++ MI + H + +L+ M G P+ T
Sbjct: 101 TVYDALKVFTKIRNPDVVAWSAMI------TGLDQQGHGQEAAELFHLMRRKGARPNQFT 154
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
L+ T D G S++G + K+G D V N +I ++M V +F+ M+
Sbjct: 155 LSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMT 214
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
N D+VSWNA++ G+ S +F +M ++ GF
Sbjct: 215 NPDLVSWNALLSGFYDSQTCGRGPRIFYQM----------LLEGF--------------- 249
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
KP+ T SVL +C+ L + GK VH ++ ++ D D +GTALVDMY
Sbjct: 250 ----------KPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYA 299
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
K C+E A F + +D +WT +IS +A ++A FR+M+ EG++PN T
Sbjct: 300 KARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPH---VYHYACMIDILSRAGLFSEAERLIRSM 436
LS C+H +E GR + V + H ++ + ++D+ + G AE + + +
Sbjct: 360 CLSGCSHMATLENGR----QLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL 415
Query: 437 PMEPDVFVWGALLGGCQMHGNVE 459
+ D+ W ++ G HG E
Sbjct: 416 -ISRDIVSWNTIISGYSQHGQGE 437
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 153/323 (47%), Gaps = 38/323 (11%)
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+++A LF M ++N SWN+++ G+ Q G ++ L+LF +M+ E K K T+++
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMK----ECETKFSKFTLST 56
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
VL CA G++ GK +H RSG + D +G +LVDMY KCG V A VF ++ D
Sbjct: 57 VLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPD 116
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG----- 393
+AW+AMI+ G+G+EA + F M +G RPN T L+S + G + G
Sbjct: 117 VVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHG 176
Query: 394 ---RWCF-----------VMMRHVYLVEP--HVYHYACMIDILSRAGLFS---------E 428
++ F +M VE V+ D++S L S
Sbjct: 177 CICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGR 236
Query: 429 AERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFY-VNLCD 484
R+ M +E P++F + ++L C + E G++V ++I + F L D
Sbjct: 237 GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVD 296
Query: 485 MYAKAGRFDDVKKTRNLMKERGI 507
MYAKA +D + + R I
Sbjct: 297 MYAKARCLEDAGVAFDRLVNRDI 319
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 265/462 (57%), Gaps = 12/462 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A VF D+ T+ MI A S + +++++ ML + + P+ +
Sbjct: 306 GLLKNARQVFDESSDKDVVTWTTMIDGYAAHDC------SEEAMEVFELMLLSHVEPNEV 359
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T ++ C+ + +G V+ +V + + + + N+++ +++ C + AR LFD M
Sbjct: 360 TLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRM 419
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+ +DV SW +M+ GY + GDL+ A F + ++N W+++I G+ Q + +E+L+LF
Sbjct: 420 ATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFH 479
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL-DCDVVIGTALVDM 317
EM +E V P + T+ SVLSAC L ++ G W+H Y + V + A+VDM
Sbjct: 480 EM----MERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDM 535
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG ++ A VF MP+++ ++W MI+ +A NG K+A + F +M G PN++TF
Sbjct: 536 YAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITF 595
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V LL+AC+H GL+ +GR F M Y ++P HYACM+D+L R GL EA +LI +MP
Sbjct: 596 VSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMP 655
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M+P WGALL C+MHGNVEL A L+ LDP + YV L + A ++ DV++
Sbjct: 656 MQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRR 715
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEEL 539
R+LMK++G++K +PG S +E+DG EF + EE+
Sbjct: 716 VRSLMKDKGVKK-IPGYSLIEIDGGFVEFLVADESHPQSEEI 756
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/533 (26%), Positives = 234/533 (43%), Gaps = 87/533 (16%)
Query: 14 NSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFC 73
N P SP N T L ++ C MR+LK+I ++ + + H ++R++ FC
Sbjct: 144 NKPKWNSPTNVIITNPTLL-IMESCSTMRQLKQIQARMTLTGIIT---HAFPVSRVIAFC 199
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGI 133
AL+ SG L YA +F+ +++ + + +N MIR N + M +
Sbjct: 200 ALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRG------YQNARKPIFAFSFFVYMFQLRV 253
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
D +F F LK C + G SVY V K G ++ V+N +I + G + +AR
Sbjct: 254 EMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQ 313
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
+FDE S++DVV+W MI GY A D + EA
Sbjct: 314 VFDESSDKDVVTWTTMIDGY-------AAHDC------------------------SEEA 342
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
+E+F+ M S VE P+++T+ +V+SAC+ +G ++ GK VH + + C + + A
Sbjct: 343 MEVFELMLLSHVE----PNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNA 398
Query: 314 LVDMYGKCGC-------------------------------VERAYGVFKEMPKKDTLAW 342
L+DMY KC C +E A F + P+K+ + W
Sbjct: 399 LLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCW 458
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
+AMI+ ++ N KE+ F EM GV P T V +LSAC + G W
Sbjct: 459 SAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVV 518
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
++ V ++D+ ++ G A + +MP E ++ W ++ G +G +
Sbjct: 519 GKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMP-ERNLISWNTMIAGYAANGRAKQAI 577
Query: 463 KVAQYLIDL--DPLNHAFYVNLCDMYAKAG-------RFDDVKKTRNLMKERG 506
V + ++ +P N+ +V+L + G FD++++ + ERG
Sbjct: 578 NVFDQMRNMGFEP-NNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERG 629
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 163/416 (39%), Gaps = 78/416 (18%)
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWN---AMIIGY---LRSGD 218
K+ +V + N + + +C + + + M+ +++ + +I + SGD
Sbjct: 147 KWNSPTNVIITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGD 206
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
L A +F R+++ N F WN++I G+ + A F M VE D +
Sbjct: 207 LHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEM----DSRSFVF 262
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
L AC + G+ V+ + + G DC++++ L+ Y + G ++ A VF E KD
Sbjct: 263 ALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKD 322
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW--- 395
+ WT MI +A + +EA + F M V PN VT + ++SAC+ G +E G+
Sbjct: 323 VVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHE 382
Query: 396 -------------------------CFVMMRHVY--LVEPHVYHYACMIDILSRAGLFSE 428
C V R ++ + VY + M++ ++ G
Sbjct: 383 KVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLES 442
Query: 429 AERLIRSMPMEPDVFVWGALLGG-----------------------------------CQ 453
A R P + + W A++ G C
Sbjct: 443 ARRFFDQTPRK-NAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACG 501
Query: 454 MHGNVELGEKVAQYLI--DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+ LG+ + QY + + PL+ + DMYAK G D + + M ER +
Sbjct: 502 QLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNL 557
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/512 (34%), Positives = 281/512 (54%), Gaps = 19/512 (3%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M ++K++H +++ +T D L+ RLL +L YA +F + ++ YN
Sbjct: 1 MNQIKQLHAHCLRTGVDETKD---LLQRLLLI------PNLVYARKLFDLHRNPCIFLYN 51
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+I++ + + + LY + GI P+ TF F+ ++
Sbjct: 52 KLIQSYSVHH------QPHESIVLYNLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLH 105
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
Q + G D F ++I+ + G + AR +FDEMSNRDV WNAMI GY R GD+
Sbjct: 106 SQFFRSGFESDSFCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGYQRRGDMK 165
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A++LF M +N+ SW ++I+GF Q G EAL +F M+ ++ VKP+ IT+ SVL
Sbjct: 166 AAMELFDSMPNKNVTSWTTVISGFSQNGNYSEALTMFLCMEK---DKSVKPNHITLVSVL 222
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM-PKKDT 339
ACA LG ++ G+ + GY R +G ++ + A ++MY KCG ++ A +F E+ +++
Sbjct: 223 PACANLGELEIGRRLEGYARENGFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNL 282
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++W +MI A +G EA + + +M EG RP+ VTFVGLL AC H G+V KG+
Sbjct: 283 ISWNSMIGSLATHGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKS 342
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M V+ + P + HY CMID+L R G EA LI++MPM+PD VWG LLG C HGNVE
Sbjct: 343 MEEVHKISPKLEHYGCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVE 402
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
+ E ++ L+ L+P N V + ++YA ++D V + R LMK+ + K VE
Sbjct: 403 IAEIASEALMKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEA 462
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
VH+F+++ E+ +L+ +S+ MK
Sbjct: 463 GVEVHKFTVEDKSHPRSYEIYQVLDEISRRMK 494
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 268/449 (59%), Gaps = 6/449 (1%)
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
D Y + + NA S+ + + L + M+ +GI PD ++ + C++ + L
Sbjct: 294 DEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNIL 353
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G S +G V++ G + N++I ++M C +A +FD MSN+ VV+WN+++ GY+
Sbjct: 354 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYI 413
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+G++D A + F M ++NI SWN+II+ VQ EA+E+F MQS +E V D +
Sbjct: 414 ENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQS---QECVNVDGV 470
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ S+ SAC +LGA+D KW++ Y+ ++ + DV +GT LVDM+ +CG E A +F +
Sbjct: 471 TMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 530
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
+D AWTA I A+ G + A + F EM +G++P+ V F+G L+AC H GLV++G+
Sbjct: 531 TNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGK 590
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M ++ V P HY CM+D+L RAGL EA +LI+ MP EP+ +W +LL C++
Sbjct: 591 EIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRV 650
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
GNVE+ A+ + L P YV L ++YA AGR++D+ K R MKE+G+RK PG
Sbjct: 651 QGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP-PGT 709
Query: 515 SSVEVDGVVHEFSM--KGSPKVVKEELVL 541
S +++ G HEF+ + P++ K E +L
Sbjct: 710 SVIQIRGKTHEFTSGDESHPEMRKIEAML 738
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 213/454 (46%), Gaps = 61/454 (13%)
Query: 15 SPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF-FC 73
S +K S PN+ +++ CK + ELK H + K +D S IT+L+ C
Sbjct: 18 STSKPSLPNQSKRTKATPSSLKNCKTIDELKMFHLSLTKQG---LDDDVSAITKLVARSC 74
Query: 74 ALSVSGSLSYATNVFSHIKR-SDLYTYNIMIRANACKSSETNDTHSGKC---LKLYKQML 129
L SLS+A VF + + + YN +IR A SG C + L+ +M+
Sbjct: 75 ELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYA---------SSGLCKEAILLFIRMM 125
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
+GISPD TFPF L C K D G ++G ++K D+FVQNS++ + CG +
Sbjct: 126 NSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELD 185
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
AR +FDEMS R+VVSW +MI GY R A+DLF RM +
Sbjct: 186 CARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVR------------------ 227
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
+E V P+ +T+ V+SACA L ++ G+ V+ ++R SG++ + +
Sbjct: 228 ----------------DEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDL 271
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+ +ALVDMY KC ++ A +F E + AM S + G KEA M G
Sbjct: 272 MISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSG 331
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY----ACMIDILSRAGL 425
+RP+ ++ + +S+C+ + G+ C H Y++ + +ID+ +
Sbjct: 332 IRPDRISMLSAISSCSQLRNILWGKSC-----HGYVLRNGFESWDNICNALIDMYMKCHR 386
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
A R+ M V W +++ G +G V+
Sbjct: 387 QDTAFRIFDRMS-NKTVVTWNSIVAGYIENGEVD 419
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/436 (38%), Positives = 255/436 (58%), Gaps = 9/436 (2%)
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGL--VGASVYGQVVKFGVC-DDVFVQNSVI 179
K + M G+ P+ +TF LL C G G ++G K G+ + V V ++I
Sbjct: 53 KEFSDMRFAGVEPNHITFIALLSGCGDFSSGSESFGDLLHGYACKLGLDRNHVMVGTAII 112
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
++ G V+ AR++FD M ++ ++WN MI GY+R G +D A LF M +R + SW +
Sbjct: 113 GMYSKHGRVSKARLVFDHMEGKNSMTWNTMIDGYMRKGKIDDAYKLFDEMPERGLISWTA 172
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I GFV+ G EAL F+EMQSS VE PD + I +VL+AC LGA+ G WVH YL
Sbjct: 173 MINGFVKKGFHEEALVWFREMQSSGVE----PDYVAIIAVLAACTNLGALSFGLWVHRYL 228
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
+V + + +D++ +CGCVE A VF M K+ ++W ++I VF+ NG+ E+
Sbjct: 229 VSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFDHMEKRTVVSWNSVIVVFSANGHADESL 288
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
FR M+ EG +PN VTF G L+AC+H GLVE+G F M+ Y + P + HY C++D+
Sbjct: 289 VYFRRMQEEGFKPNAVTFTGALTACSHVGLVEEGLRYFQTMKKEYRISPRIEHYGCLVDL 348
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG-NVELGEKVAQYLIDLDPLNHAF 478
SRAG +A +++SMPM+P+ V G+LL C+ HG N L E++ ++L D + +H+
Sbjct: 349 YSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDTNVKSHSN 408
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
YV L +MYA G+++ K R MK G++K+ PG SS+E+D H F S V
Sbjct: 409 YVILSNMYAADGKWEGASKMRRKMKGLGLKKQ-PGFSSIEIDDCTHVFMAGDSAHVETGY 467
Query: 539 LVLILNGLSKIMKNGG 554
+ +L LS M++ G
Sbjct: 468 IREVLEILSSDMQSQG 483
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 150/340 (44%), Gaps = 77/340 (22%)
Query: 227 RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
+++ SW S IT + GR EA + F +M+ + VE P+ IT ++LS C
Sbjct: 25 QKLNLSTTISWTSRITLLSRNGRLAEAAKEFSDMRFAGVE----PNHITFIALLSGCGDF 80
Query: 287 --GAIDHGKWVHGYLRRSGLDCD-VVIGTALVDMYGKCGCVER----------------- 326
G+ G +HGY + GLD + V++GTA++ MY K G V +
Sbjct: 81 SSGSESFGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHMEGKNSMTWN 140
Query: 327 --------------AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
AY +F EMP++ ++WTAMI+ F G+ +EA FREM++ GV P
Sbjct: 141 TMIDGYMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEP 200
Query: 373 NHVTFVGLLSACAHSGLVEKGRWC--FVMMRH--------------------VYLVEPHV 410
++V + +L+AC + G + G W +++ R V L +P
Sbjct: 201 DYVAIIAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQPVF 260
Query: 411 YH--------YACMIDILSRAGLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVE 459
H + +I + S G E+ R M E P+ + L C G VE
Sbjct: 261 DHMEKRTVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVE 320
Query: 460 LGEKVAQYL---IDLDP-LNHAFYVNLCDMYAKAGRFDDV 495
G + Q + + P + H Y L D+Y++AGR +D
Sbjct: 321 EGLRYFQTMKKEYRISPRIEH--YGCLVDLYSRAGRLEDA 358
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 63/289 (21%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHS----------------- 118
S G +S A VF H++ + T+N MI + + +D +
Sbjct: 116 SKHGRVSKARLVFDHMEGKNSMTWNTMIDG-YMRKGKIDDAYKLFDEMPERGLISWTAMI 174
Query: 119 ---------GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVC 169
+ L +++M +G+ PD + +L CT G V+ +V
Sbjct: 175 NGFVKKGFHEEALVWFREMQSSGVEPDYVAIIAVLAACTNLGALSFGLWVHRYLVSRDFR 234
Query: 170 DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
++V V NS I L CG V A+ +FD M R VVSWN++I+ + +G D +L FRRM
Sbjct: 235 NNVRVNNSSIDLHCRCGCVELAQPVFDHMEKRTVVSWNSVIVVFSANGHADESLVYFRRM 294
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
++ GF KP+ +T L+AC+++G +
Sbjct: 295 QEE----------GF-------------------------KPNAVTFTGALTACSHVGLV 319
Query: 290 DHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
+ G ++ + + + LVD+Y + G +E A V + MP K
Sbjct: 320 EEGLRYFQTMKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMK 368
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 296/560 (52%), Gaps = 79/560 (14%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +C N +K+IH Q+IK C D + + +L+ + S++ +LS A NVF+ +
Sbjct: 29 LHKCTNPNHIKQIHAQLIK--CHLHQDPY-IAPKLI--ASYSLTNNLSSAVNVFNQVPDP 83
Query: 95 DLYTYNIMIRANACKSSETNDTHS-GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+++ YN +IRA + +E+N + G LK++ G+ D T+PFLLK C
Sbjct: 84 NVHLYNYLIRAYSLSGNESNSLCAFGVLLKMH----VDGVLADNFTYPFLLKGCNGSSSW 139
Query: 154 L-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT----------------------- 189
L + V+ V K G D+FV NS+I + CG V
Sbjct: 140 LSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGG 199
Query: 190 --------SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS-- 239
A +FDEM RD VSWN M+ G+ ++G++D A LF RM +R+I SW++
Sbjct: 200 LVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMV 259
Query: 240 -----------------------------IITGFVQGGRAREALELFQEMQSSSVEEMVK 270
II+G+ + G+ +EA+ L EM+ S + +
Sbjct: 260 CGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGL----R 315
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
D S+L+ACA G + GK +H RS C + + +DMY KCGCV+ A+ V
Sbjct: 316 LDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRV 375
Query: 331 FKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
F M +KD ++W +MI F ++G+G+++ + F M EG +P+ TF+GLL AC H+GL
Sbjct: 376 FNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGL 435
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V +GR F M+ VY + P + HY CM+D+L R G EA L+RSMP EP+ + G LL
Sbjct: 436 VNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLL 495
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G C+MH +V+L V++YL L P + + L ++YA++G + +V K R M + G +K
Sbjct: 496 GACRMHNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQK 555
Query: 510 EVPGCSSVEVDGVVHEFSMK 529
G SS+EV+ VHEF+++
Sbjct: 556 P-SGVSSIEVEEEVHEFTVR 574
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 292/541 (53%), Gaps = 49/541 (9%)
Query: 16 PAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL 75
P K+ N IL I +C + REL +I IKS + S T+L+ FC
Sbjct: 21 PLKIDTVNPNPPNPIL--LISKCNSERELMQIQAYAIKS----HQEDVSFNTKLINFCTE 74
Query: 76 S-VSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS 134
S S+SYA ++F + D+ +N + R + T+ + L+ ++L +
Sbjct: 75 SPTESSMSYARHLFDAMSEPDIVIFNSIARGY------SRSTNPLEVFNLFVEILEDDLL 128
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
PD TFP LLK C G ++ +K GV D+V+V ++I+++ C V +AR +
Sbjct: 129 PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCV 188
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD R+ + + +N++ITG+ + R EAL
Sbjct: 189 FD-------------------------------RIVEPCVVCYNAMITGYARRNRPNEAL 217
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
LF+EMQ ++ KP++IT+ SVLS+CA LG++D GKW+H Y ++ G V + TAL
Sbjct: 218 SLFREMQGKNL----KPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTAL 273
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+DM+ KCG ++ A +F+ M KDT AW+AMI +A +G + + F M +E V+P+
Sbjct: 274 IDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDE 333
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+TF+GLL+AC+H+GLVE+GR F M H + + P + HY M+D+L RAG +A I
Sbjct: 334 ITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFID 393
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
+P+ P +W LL C H N+EL EKV++ +++LD + YV L ++YA+ +++
Sbjct: 394 KLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEA 453
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
V R +MK+R K VPGCSS+EV+ VVHEF K +L L+ + K +K G
Sbjct: 454 VDSLRKVMKDRKAVK-VPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAG 512
Query: 555 F 555
+
Sbjct: 513 Y 513
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 307/507 (60%), Gaps = 17/507 (3%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
K+++ ++ H++I+ L + + L T+L+F A ++ ++ VF ++ +++
Sbjct: 37 KSLKLTRQSHSRILS---LGLSQNSLLATKLIF--AYAICQHPYHSRLVFDSLQHKNVFL 91
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+N +I A K+ N+ +L+ QM + + PD T L K ++ G S
Sbjct: 92 WNSLINGYA-KNRLYNEA-----FQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKS 145
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
++G+ ++ G D V NS++S++ CG +R +FDEM+ R+ SWN +I GY SG+
Sbjct: 146 IHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGN 205
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
L V +F RMK RN+FSW ++I G+V+ G + EAL LF++MQ V + ++P+++++ S
Sbjct: 206 LVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQ---VIDGIEPNRVSLVS 262
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK-K 337
VL AC+ + G+ +HG+ R L+ +V + AL+DMY KCG ++ A VF++ K
Sbjct: 263 VLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCK 322
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
D ++W++MIS + L+G G+EA + +M G+RP+ +T VG+LSAC+ SGLV +G +
Sbjct: 323 DAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIY 382
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+ + Y +EP + +AC++D+L RAG A I++MP+EP VWGAL+ +HG+
Sbjct: 383 SSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGD 442
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
+E+ E ++LI L+P N + YV++ ++YA + R+D V + R +MK++ +RK VPGCS +
Sbjct: 443 LEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRK-VPGCSWI 501
Query: 518 EVDGVVHEF-SMKGSPKVVKEELVLIL 543
++ H F ++K S + V L+ I+
Sbjct: 502 SINNKTHCFYTLKYSLRQVCLILLFII 528
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/453 (39%), Positives = 260/453 (57%), Gaps = 26/453 (5%)
Query: 95 DLYTYNIMIRANACKSS--ETNDTHS-----GKCLKLYK-----QMLCTGISPDCLT--F 140
D +T++++ ++ A + E + HS G CL LY M DC F
Sbjct: 87 DSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLF 146
Query: 141 PFLLKECTKRLDGLVGASVY-------GQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
++ L+G V G++ + D N++I ++ G + SAR
Sbjct: 147 DEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARK 206
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LFDEM R VVSW MI GY +G+LD A LF M ++N+FSWN++I+G+ Q + EA
Sbjct: 207 LFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQPYEA 266
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
L+LF EMQS++ ++PD++TI SVL A A LGA+D G WVH ++RR LD +GTA
Sbjct: 267 LKLFHEMQSTTS---LEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTA 323
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
L+DMY KCG + ++ GVF MP+K+T +W A+I+ FA+NG KEA F EM +G PN
Sbjct: 324 LIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPN 383
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
+T +G+LSAC HSGLVE+G+ F M L P + HY CM+D+L RAG EAE+L+
Sbjct: 384 EITMIGVLSACNHSGLVEEGKRWFKAMEEFGLT-PKIEHYGCMVDLLGRAGCLQEAEKLM 442
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
SMP E + + + L C +V E+V + I ++ N Y+ L ++YA R+
Sbjct: 443 ESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWK 502
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ + + LM+ G++KE GCS++EVD V EF
Sbjct: 503 EADEVKGLMRRNGVKKEA-GCSAIEVDSRVWEF 534
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 142/343 (41%), Gaps = 59/343 (17%)
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG 287
R + + F NS+I +V + E+ L+++++ ++ PD T + + +CA
Sbjct: 46 RPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTS---FTPDSFTFSVLAKSCALNM 102
Query: 288 AIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMIS 347
AI G+ +H ++ G D+ TALVDMY K G ++ A +F EM + ++WTA+I
Sbjct: 103 AIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIG 162
Query: 348 VFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
+ +G A F +M + + F ++ A G + R F M E
Sbjct: 163 GYVRSGDMDNAGKLFDQM----IEKDSAAFNTMIDAYVKLGDMCSARKLFDEM-----PE 213
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG---------------- 451
V + MI S G A L +MP E ++F W A++ G
Sbjct: 214 RSVVSWTIMIYGYSSNGNLDSARSLFDAMP-EKNLFSWNAMISGYRQNKQPYEALKLFHE 272
Query: 452 CQMHGNVELGE----KVAQYLIDLDPLNHAFYVN-----------------LCDMYAKAG 490
Q ++E E V + DL L+ +V+ L DMYAK G
Sbjct: 273 MQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCG 332
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPK 533
++K RG+ +P + + +++ F++ G K
Sbjct: 333 E---------IVKSRGVFDNMPEKETASWNALINAFAINGRAK 366
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/471 (36%), Positives = 277/471 (58%), Gaps = 12/471 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G ++ A +F + D+ ++N ++ A A K N+ + LY+ + +
Sbjct: 143 GDVNNARKLFDRMMEKDVVSWNTIVLAYA-KQGCFNEA-----IGLYRDFRRLDMGFNAF 196
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+F +L C K + + V+GQV+ G ++ + +S++ + CG + AR LFDEM
Sbjct: 197 SFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEM 256
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+D+ +W ++ GY + GD++ A +LF +M ++N SW+++I+G+ + EAL+ F
Sbjct: 257 LVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFT 316
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+M + P++ T +S L ACA + A+ HGK VHGYL R+ C+ ++ ++L+DMY
Sbjct: 317 KMMKFGIN----PEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMY 372
Query: 319 GKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
KCG +E + VF M K+D + W MIS A NG+G++A F +M G++P+ +TF
Sbjct: 373 SKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITF 432
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+ +LSAC+HSGLV++G F M + + V P HYAC+ID+L RAG F E + +M
Sbjct: 433 IVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMS 492
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+PD VW ALLG C++H N+ELG KVA+ +I+L P + A YV+L +YA G+++ V+K
Sbjct: 493 CKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEK 552
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
R LM E+ IRKE G S ++V H F +KEE+ L+L L++
Sbjct: 553 VRELMDEKFIRKE-RGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLAR 602
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 161/333 (48%), Gaps = 47/333 (14%)
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRN 233
V N +I ++ CG AR +FD+MS R++ SWN M+ GY + GD++ A LF RM +++
Sbjct: 100 VANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKD 159
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
+ SWN+I+ + + G EA+ L+++ + + + + A VL C L + K
Sbjct: 160 VVSWNTIVLAYAKQGCFNEAIGLYRDFRRLD----MGFNAFSFAGVLILCVKLKELQLAK 215
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCG---C--------------------------- 323
VHG + +G ++V+ +++VD Y KCG C
Sbjct: 216 QVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWG 275
Query: 324 -VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
+ A +F +MP+K+ ++W+A+IS +A N G EA D F +M G+ P TF L
Sbjct: 276 DMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLC 335
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPH----VYHYACMIDILSRAGLFSEAERLIRSMPM 438
ACA ++ G+ H YL+ + + +ID+ S+ G+ + + M
Sbjct: 336 ACASIAALKHGK-----QVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGN 390
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
+ DV VW ++ +G+ GEK Q D+
Sbjct: 391 KQDVVVWNTMISALAQNGH---GEKAMQMFNDM 420
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 96/260 (36%), Gaps = 38/260 (14%)
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD-C 306
GR EAL + + P I + +L CA GK VH +L+ +G
Sbjct: 41 GRLPEALSYLDRLAQRGIR---LPTGIFV-DLLRLCAKAKYFKGGKCVHLHLKHTGFKRP 96
Query: 307 DVVIGTALVDMYGKCGC-------------------------------VERAYGVFKEMP 335
++ L+ MY +CG V A +F M
Sbjct: 97 TTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMM 156
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+KD ++W ++ +A G EA +R+ + N +F G+L C ++ +
Sbjct: 157 EKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQ 216
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
+ + V + ++D S+ G A L M ++ D+ W ++ G
Sbjct: 217 VHGQVLVAGFLSNLVLS-SSIVDAYSKCGEMRCARTLFDEMLVK-DIHAWTTIVSGYAKW 274
Query: 456 GNVELGEKVAQYLIDLDPLN 475
G++ ++ + + +P++
Sbjct: 275 GDMNSASELFHQMPEKNPVS 294
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 6/165 (3%)
Query: 332 KEMPKKDTLAWTAMISVFALNGYGK--EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
K + D+ S+ L+ G+ EA + G+R FV LL CA +
Sbjct: 18 KSKQRPDSTGLCIAQSLLDLSSQGRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKY 77
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
+ G+ + ++H P +I + G EA ++ M + +++ W +L
Sbjct: 78 FKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVR-NLYSWNHML 136
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
G G+V K+ +++ D ++ + + YAK G F++
Sbjct: 137 AGYAKLGDVNNARKLFDRMMEKDVVS---WNTIVLAYAKQGCFNE 178
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 291/538 (54%), Gaps = 57/538 (10%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVSG 79
PN + IL+ + ++ E K IH Q+IKS + + H +SL+ + G
Sbjct: 189 PNMYTFISILKTCASK-GDLNEGKAIHGQVIKSG-INPDSHLWNSLVN------VYAKCG 240
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
S +YA VF I D+ ++ +I + G L+++ QML G +P+ T
Sbjct: 241 SANYACKVFGEIPERDVVSWTALITGFVAEGY-------GSGLRIFNQMLAEGFNPNMYT 293
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
F +L+ C+ D +G V+ Q+VK + + FV +++ ++ F+ A +F+
Sbjct: 294 FISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFN--- 350
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
R+ KR++F+W I+ G+ Q G+ +A++ F +
Sbjct: 351 ----------------------------RLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQ 382
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
MQ E VKP++ T+AS LS C+ + +D G+ +H ++G D+ + +ALVDMY
Sbjct: 383 MQ----REGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYA 438
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCGCVE A VF + +DT++W +I ++ +G G +A F M EG P+ VTF+G
Sbjct: 439 KCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIG 498
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+LSAC+H GL+E+G+ F + +Y + P + HYACM+DIL RAG F E E I M +
Sbjct: 499 VLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT 558
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
+V +W +LG C+MHGN+E GE+ A L +L+P + Y+ L +M+A G +DDV R
Sbjct: 559 SNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVR 618
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEF-SMKGS-PKVVKEELVLILNGLSKIMKNGGF 555
LM RG++KE PGCS VEV+G VH F S GS PK+ E+ L L L + + + G+
Sbjct: 619 ALMSTRGVKKE-PGCSWVEVNGQVHVFLSHDGSHPKI--REIHLKLQDLHQKLMSVGY 673
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 206/448 (45%), Gaps = 56/448 (12%)
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
++ Q+L G P+ TF +LK C + D G +++GQV+K G+ D + NS+++++
Sbjct: 177 RILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVY 236
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
CG A +F E+ RDVVSW A+ IT
Sbjct: 237 AKCGSANYACKVFGEIPERDVVSWTAL-------------------------------IT 265
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
GFV G L +F +M + E P+ T S+L +C+ L +D GK VH + ++
Sbjct: 266 GFVAEGYG-SGLRIFNQM----LAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKN 320
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
LD + +GTALVDMY K +E A +F + K+D AWT +++ +A +G G++A F
Sbjct: 321 SLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCF 380
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
+M+ EGV+PN T LS C+ ++ GR M ++ + ++D+ ++
Sbjct: 381 IQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ-SGDMFVASALVDMYAK 439
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL-NHAFYVN 481
G +AE + + + D W ++ G HG K + ++D + + ++
Sbjct: 440 CGCVEDAEVVFDGL-VSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIG 498
Query: 482 LCDMYAKAGRFDDVKKTRN-LMKERGIRKEVPGCSSV-----------EVDGVVHEFSMK 529
+ + G ++ KK N L K GI + + + EV+ + E MK
Sbjct: 499 VLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEE--MK 556
Query: 530 GSPKVVKEELVLILNGLSKIMKNGGFGQ 557
+ V+ E VL G K+ N FG+
Sbjct: 557 LTSNVLIWETVL---GACKMHGNIEFGE 581
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 174/392 (44%), Gaps = 47/392 (11%)
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
SL A V + D+ +N + SS + + ++L+ M T I +
Sbjct: 39 SLQCARQVLEEMPIQDVQQWNQKL------SSANSPYPLQEAVQLFYLMRHTRIRLNQFI 92
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
F L+ D G S++ V K+G D+ + N+ +++
Sbjct: 93 FASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM------------------ 134
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
Y+++ ++ F+ M N+ S N++++GF + + +
Sbjct: 135 -------------YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQ 181
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
+ + E +P+ T S+L CA G ++ GK +HG + +SG++ D + +LV++Y
Sbjct: 182 L----LVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYA 237
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG A VF E+P++D ++WTA+I+ F GYG F +M AEG PN TF+
Sbjct: 238 KCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFIS 296
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+L +C+ V+ G+ + L + + + ++D+ ++ +AE + + ++
Sbjct: 297 ILRSCSSLSDVDLGKQVHAQIVKNSL-DGNDFVGTALVDMYAKNRFLEDAETIFNRL-IK 354
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
D+F W ++ G G GEK + I +
Sbjct: 355 RDLFAWTVIVAGYAQDGQ---GEKAVKCFIQM 383
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 165/379 (43%), Gaps = 68/379 (17%)
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
+V+K G+C D + +S++++++ C + AR + +EM +DV WN L S +
Sbjct: 14 RVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQK----LSSANSPY 69
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
L +EA++LF M+ + ++ ++ AS++S
Sbjct: 70 PL---------------------------QEAVQLFYLMRHTR----IRLNQFIFASLIS 98
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
A A LG +G+ +H + + G + D++I A V MY K VE + FK M ++ +
Sbjct: 99 AAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLAS 158
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM- 400
++S F + ++ EG PN TF+ +L CA G + +G+ +
Sbjct: 159 RNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVI 218
Query: 401 -------RHVYLVEPHVY------HYACMI-------DILSRAGL--------FSEAERL 432
H++ +VY +YAC + D++S L + R+
Sbjct: 219 KSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGLRI 278
Query: 433 IRSMPME---PDVFVWGALLGGCQMHGNVELGEKV-AQYLIDLDPLNHAFYVNLCDMYAK 488
M E P+++ + ++L C +V+LG++V AQ + + N L DMYAK
Sbjct: 279 FNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAK 338
Query: 489 AGRFDDVKKTRNLMKERGI 507
+D + N + +R +
Sbjct: 339 NRFLEDAETIFNRLIKRDL 357
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 273/476 (57%), Gaps = 7/476 (1%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRA-NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
L A VF + D+ ++N +I NA + +KL+ +M+ PD LT
Sbjct: 166 LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMV-NQFKPDLLT 224
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
+L+ C D G V+ ++ G D N +I+++ CG + +++ +F M
Sbjct: 225 ITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMK 284
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+D VSWN+MI Y+++G + +L +F MK R+I +WN+II V L +
Sbjct: 285 CKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISR 344
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M++ E V PD T+ S+L C+ L A GK +HG + + GL+ DV +G L++MY
Sbjct: 345 MRT----EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYS 400
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG + ++ VFK M KD + WTA+IS + G GK+A F EMEA G+ P+HV FV
Sbjct: 401 KCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVA 460
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
++ AC+HSGLVE+G F M+ Y +EP + HYAC++D+LSR+ L +AE I SMP++
Sbjct: 461 IIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK 520
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
PD +WGALL C+M G+ E+ E+V++ +I+L+P + +YV + ++YA G++D V+ R
Sbjct: 521 PDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIR 580
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+K RG++K+ PGCS +E+ V+ F EE+ +L L+ +M G+
Sbjct: 581 KSIKARGLKKD-PGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGY 635
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 210/461 (45%), Gaps = 80/461 (17%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
+ A+ +L ++H+ II HHS+I + + + +VF
Sbjct: 19 ISRALASAATTTQLHKLHSLII-----TLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRL 73
Query: 91 IKRSD-LYTYNIMIRANACKSSETNDTHSG---KCLKLYKQMLCTGISPDCLTFPFLLKE 146
S+ +Y +N +IRA TH+G + L LY + + PD TFP ++
Sbjct: 74 ASPSNNVYLWNSIIRAL---------THNGLFSEALSLYSETQRIRLQPDTYTFPSVINA 124
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
C LD + S++ +V+ G D+++ N++I ++ + AR +F+EM RDVVSW
Sbjct: 125 CAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSW 184
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
N++I GY +G + AL+++ ++++LF EM +
Sbjct: 185 NSLISGYNANGYWNEALEIY------------------------YQSIKLFMEMVNQ--- 217
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
KPD +TI S+L AC +LG ++ GK+VH Y+ SG +CD L++MY KCG +
Sbjct: 218 --FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLA 275
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA------------------- 367
+ VF M KD+++W +MI+V+ NG ++ F M+A
Sbjct: 276 SQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDC 335
Query: 368 ------------EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
EGV P+ T + +L C+ +G+ + + L E V
Sbjct: 336 NLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGL-ESDVPVGNV 394
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+I++ S+ G + ++ + M + DV W AL+ C M+G
Sbjct: 395 LIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYG 434
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 257/442 (58%), Gaps = 13/442 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G + A VF + D +T+ MI E ND + L ++ M G D
Sbjct: 216 TGMVEEARGVFDGAEHRDAFTWTAMI-----SCFERNDLFV-EALAVFSDMREEGWPVDE 269
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
++ C K G +G VV+ G+ V VQN++I ++ +C V +AR LFD
Sbjct: 270 AVMVSVVAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDS 329
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ D SWN+MI GYL++G ++ A LF M ++ SW+++I G VQ ++ EAL +F
Sbjct: 330 SESLDHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVF 389
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
M++ + KPD++T+ SV+SAC L A++ GK VH Y+R+ + +V+GT+L+DM
Sbjct: 390 DNMRAHEI----KPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQYNITIVLGTSLIDM 445
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR-PNHVT 376
Y KCGC+E A VF + +K T W A+I A+NG + D F EME G+ P+ +T
Sbjct: 446 YMKCGCMEAALEVFDMVEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEIT 505
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
F G+LSAC H GLVE+GR F +M++ Y + P++ HY CM+D+L RAG EAE LI+SM
Sbjct: 506 FTGVLSACRHGGLVEEGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSM 565
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
PM PDV WGALLG C H + E+GE+V + L+ LDP + F L ++YA G + VK
Sbjct: 566 PMSPDVPAWGALLGACWKHSDSEVGERVGKKLVKLDPHHDGFQTMLSNIYASEGMWQCVK 625
Query: 497 KTRNLMKERGIRKEVPGCSSVE 518
R MK+ + V GCS VE
Sbjct: 626 DLRGSMKQHVAK--VAGCSVVE 645
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 221/499 (44%), Gaps = 85/499 (17%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG-----SL 81
T +L + C++ R L EIH Q + S L D ++ +RLL F + + L
Sbjct: 3 TVSLLDAQLSRCRSARHLLEIHAQFLASGLLA--DAYA-ASRLLLFTTSATAARLLPQPL 59
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
++ +F ++ + +T N +IRA A + + C LY M +PD T P
Sbjct: 60 HHSLQLFRLVRSPNAFTCNTLIRA-ALRQGLPH-----LCFPLYASM---PAAPDTYTHP 110
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
L C R D G V+ VK G D+++++N+++ ++ ACG V AR +FD
Sbjct: 111 LLAAACAARGDAREGRQVHSHAVKHGFGDNLYLRNALMHMYSACGCVAGARRVFDAGPVW 170
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKK------------------------------ 231
D VSWN ++ Y+R GD++ A+ +F RM +
Sbjct: 171 DAVSWNTILATYVRDGDVEQAVGVFARMPERSAAAVSSMVALFARTGMVEEARGVFDGAE 230
Query: 232 -RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
R+ F+W ++I+ F + EAL +F +M+ EE D+ + SV++ACA I
Sbjct: 231 HRDAFTWTAMISCFERNDLFVEALAVFSDMR----EEGWPVDEAVMVSVVAACAKSEVIQ 286
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKC----------------------------- 321
+G+ HG + R+GL V + AL+ MY C
Sbjct: 287 NGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDHFSWNSMISGYL 346
Query: 322 --GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
G VE A +F MP KD ++W+AMI+ N EA F M A ++P+ VT V
Sbjct: 347 KNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVTLVS 406
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
++SAC + +E+G+ +R Y + +ID+ + G EA + M E
Sbjct: 407 VISACTNLCALEQGKLVHEYIRQ-YQYNITIVLGTSLIDMYMKCGCM-EAALEVFDMVEE 464
Query: 440 PDVFVWGALLGGCQMHGNV 458
W A++ G M+G V
Sbjct: 465 KGTPCWNAVIVGLAMNGLV 483
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 191/496 (38%), Positives = 277/496 (55%), Gaps = 46/496 (9%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSY 83
+E+ + ILR+ + K +L +IH I++ Q+N +++ + C + Y
Sbjct: 6 REAERRILRH-LHGRKTRTQLPQIHAHILRHHLHQSN---QILSHFISVCG--ALDKMGY 59
Query: 84 ATNVFSHIKRSDLYTYNIMIRA-NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPF 142
A VF + +L +N MI+ + C SE + L L+ QM GI PD TF
Sbjct: 60 ANLVFHQTQNPNLLLFNSMIKGYSLCGPSENS-------LLLFSQMKNRGIWPDEFTFAP 112
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
LLK C+ D +G V+G V+ G ++ +I L+ +CG + A+ +FDEM +RD
Sbjct: 113 LLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRD 172
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
M+ R++ SWNS+I G Q GR EALELF+EM
Sbjct: 173 --------------------------MRDRSVVSWNSMIAGLEQSGRDGEALELFREMWD 206
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV-IGTALVDMYGKC 321
E PD T+ ++L CA LGA+D G+W+H Y S L D + +G +LVD Y KC
Sbjct: 207 HGFE----PDDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKC 262
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G +E A+ VF EMP+K+ ++W AMIS NG G+ D F EM +GVRPN TFVG+L
Sbjct: 263 GILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVL 322
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
S CAH+GLVE+GR F M + +EP + H+ CM+D+L+R G EA L+R+MPM P+
Sbjct: 323 SCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPN 382
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+WG+LL + G+V+ E + LI+L+P N YV L ++YA+ G++D+V+K R L
Sbjct: 383 AVLWGSLLSAYRTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRAL 442
Query: 502 MKERGIRKEVPGCSSV 517
MKE+ IRK PG S V
Sbjct: 443 MKEKNIRKN-PGQSMV 457
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/384 (41%), Positives = 239/384 (62%), Gaps = 11/384 (2%)
Query: 176 NSVISLFMACGF-----VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
N+V + M CGF + AR LFD+M R+VV+WNAMI Y+++ +D A+ LF M
Sbjct: 119 NTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP 178
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
++N SW ++I G+V+ G+ EA +L +M + KPD+ T A LS+CA+L A+
Sbjct: 179 EKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN-----KPDQSTFACGLSSCAHLAALQ 233
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
GK +H + +SG D+ + AL+ MY KCG + A +FK++ D ++W ++I+ +A
Sbjct: 234 VGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYA 293
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
LNG G+EA F +ME EGV P+ VTFVG+LSAC+H GL+++G F M Y +EP
Sbjct: 294 LNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLA 353
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HYACM+D+L RAG EA +L+R M + + +WGALLG C++HGN+EL + A+ L++
Sbjct: 354 EHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLE 413
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
+P + YV L +M A+AGR+D+V + R LMKE+G K+ PG S +E+ VH F +
Sbjct: 414 FEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQ-PGWSWIELQNRVHAFLSED 472
Query: 531 SPKVVKEELVLILNGLSKIMKNGG 554
EL IL L+ M+N G
Sbjct: 473 PAHPRAVELCHILRSLTAHMRNTG 496
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 138/268 (51%), Gaps = 17/268 (6%)
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
AR LFD M +D+VSWN+M+ GY R+G++ + L F M +R++ SWN ++ GFV+ G
Sbjct: 46 ARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDL 105
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
+ E F E++ P+ ++ ++L A G I + + + +VV
Sbjct: 106 NSSWEFF--------EKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIR----NVVA 153
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
A++ Y + V+ A +F EMP+K++++WT +I+ + G EA +M
Sbjct: 154 WNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN- 212
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
+P+ TF LS+CAH ++ G+ ++M+ Y + V + +I + ++ G S A
Sbjct: 213 KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSN--ALITMYAKCGSISSA 270
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGN 457
E L + + DV W +L+ ++GN
Sbjct: 271 ELLFKDID-HFDVVSWNSLIAAYALNGN 297
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 164/386 (42%), Gaps = 92/386 (23%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
PD TF L C VG ++ V+K G D+FV N++I+++ CG ++SA +L
Sbjct: 214 PDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELL 273
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F ++ + DVVSWN++I Y +G+ REAL
Sbjct: 274 FKDIDHFDVVSWNSLIAAYALNGN-------------------------------GREAL 302
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
+LF +M+ E V PD++T +LSAC+++G ID G
Sbjct: 303 KLFHKMEV----EGVAPDEVTFVGILSACSHVGLIDQG---------------------- 336
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLA--WTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
+ ++ C+ +AY + + LA + M+ + G +EAF R M+ +
Sbjct: 337 LKLF---KCMVQAYNI-------EPLAEHYACMVDLLGRAGRLEEAFQLVRGMK---INA 383
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH-VYHYACMIDILSRAGLFSEAER 431
N + LL AC G +E ++ + EPH +Y + ++ + AG + E R
Sbjct: 384 NAGIWGALLGACRIHGNLELAKFA---AEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVAR 440
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHG--NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
+ R M + G + G +EL +V +L + DP H V LC +
Sbjct: 441 VRRLMKEK----------GAEKQPGWSWIELQNRVHAFLSE-DP-AHPRAVELCHILRSL 488
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCS 515
++ T ++ E + KEV G S
Sbjct: 489 T--AHMRNTGDMPLELDVTKEVAGTS 512
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 292/579 (50%), Gaps = 75/579 (12%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVSGSLSYATNVFSHIKRSD 95
CK + L+++ QII + Q N + +++T + +++A ++F H
Sbjct: 77 CKTVALLQKVQAQII-THGFQYNGYVAPNVVTSWVGL------KQMAHARHLFDHFPDPK 129
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
+ +N + R ++ + + L+ +M + P+C TFP +LK C K +
Sbjct: 130 VELWNAISRG------YFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVE 183
Query: 156 GASVYGQVVKFGVCDDVFVQ-------------------------------NSVISLFMA 184
G ++ +V+K G+ + FV S+IS ++
Sbjct: 184 GEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYIL 243
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
C V AR LFD RDVV WN M+ GY+ GD+ A LF M R+ SWN+++ G+
Sbjct: 244 CNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGY 303
Query: 245 VQGGRAREALELFQEMQSSSV----------------------------EEMVKPDKITI 276
G +LF+EM +V + +V P+ T+
Sbjct: 304 ANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATL 363
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+VLSACA LGA+D GKWVH Y G + +G AL+DMY KCG +E A VF+ M
Sbjct: 364 VTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDL 423
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD + W +MI A +G G +A F +M+ G +P+ +TF+G+L +C H GLVE+G
Sbjct: 424 KDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSY 483
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F M + Y + P + HY CM+D+ RAGL A ++ MPME D +W ALLG C+++
Sbjct: 484 FNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYK 543
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
N++L E Q LI L+P N A YV L ++Y GR+ DV + + LM++ G K++PGCS
Sbjct: 544 NIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTG-SKKLPGCSL 602
Query: 517 VEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+EV+ V EF +E+ +L GL K++++ G+
Sbjct: 603 IEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 641
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 270/497 (54%), Gaps = 39/497 (7%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMI-----RANACKSSET------- 113
+ R + AL G + A +FS R +YN MI N K+ E
Sbjct: 169 LGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQE 228
Query: 114 ---------NDTHSG--------KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
N SG + L++ +L GI PD T +L C G
Sbjct: 229 GVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRG 288
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
+ + G+ + V +++ ++ C + +A+M FD +S RD+ +WNA+I GY R
Sbjct: 289 KEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARC 348
Query: 217 GDLDVALDLFRRMKKR----NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+ +L ++M++ N+++WN II G+V+ + A++LF EMQ +++ +PD
Sbjct: 349 NQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANL----RPD 404
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
T+ +L+AC+ L I GK VH Y R+G D DV IG ALVDMY KCG V+ Y V+
Sbjct: 405 IYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYN 464
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
+ + ++ AM++ +A++G+G+E FR M A VRP+HVTF+ +LS+C H+G +E
Sbjct: 465 MISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEI 524
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G C +M Y V P + HY CM+D+LSRAG EA LI+++P E D W ALLGGC
Sbjct: 525 GHECLALMV-AYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGC 583
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
+H V+LGE A+ LI+L+P N YV L ++YA AG++ + +TR LMK+ G++K P
Sbjct: 584 FIHNEVDLGEIAAEKLIELEPNNPGNYVMLANLYASAGKWHYLTQTRQLMKDMGMQKR-P 642
Query: 513 GCSSVEVDGVVHEFSMK 529
GCS +E +H F K
Sbjct: 643 GCSWIEDRDGIHVFVAK 659
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 170/455 (37%), Gaps = 124/455 (27%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
P T+ +L C ++G ++ +K G FV ++ ++ +A +
Sbjct: 49 PSSTTYASILDSCGS---PILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHV 105
Query: 195 FDEMSNRDVVSWNAMIIGYLRSG---------------DLDVALDLF------------- 226
FD M R++ SW A++ Y+ G + V LD F
Sbjct: 106 FDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLC 165
Query: 227 --------------------------RRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
R +++ S+N++I G+ + G +A ELF M
Sbjct: 166 AVELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRM 225
Query: 261 QSSSVE-------------------------------EMVKPDKITIASVLSACAYLGAI 289
+ V+ E ++PD T+ SVL+ CA + +I
Sbjct: 226 EQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASI 285
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
GK H GL + ++G ALV+MY KC + A F + ++D W A+IS +
Sbjct: 286 RRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGY 345
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A ++ + ++M +G PN T+ G++ +G VE ++ M
Sbjct: 346 ARCNQAEKIRELHQKMRRDGFEPNVYTWNGII-----AGYVENKQYDSAMQ--------- 391
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI 469
LF+E ++ + PD++ G +L C ++ G++V Y I
Sbjct: 392 ---------------LFTE----MQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSI 432
Query: 470 DL--DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
D H L DMYAK G + N++
Sbjct: 433 RAGHDSDVH-IGAALVDMYAKCGDVKHCYRVYNMI 466
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 170/471 (36%), Positives = 277/471 (58%), Gaps = 12/471 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G ++ A +F + D+ ++N ++ A A K N+ + LY+ + +
Sbjct: 143 GDVNNARKLFDRMMEKDVVSWNTIVLAYA-KQGCFNEA-----IGLYRDFRRLDMGFNAF 196
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+F +L C K + + V+GQV+ G ++ + +S++ + CG + AR LFDEM
Sbjct: 197 SFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEM 256
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+D+ +W ++ GY + GD++ A +LF +M ++N SW+++I+G+ + EAL+ F
Sbjct: 257 LVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFT 316
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+M + P++ T +S L ACA + A+ HGK VHGYL R+ C+ ++ ++L+DMY
Sbjct: 317 KMMKFGIN----PEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMY 372
Query: 319 GKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
KCG +E + VF M K+D + W MIS A NG+G++A F +M G++P+ +TF
Sbjct: 373 SKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITF 432
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+ +LSAC+HSGLV++G F M + + V P HY+C+ID+L RAG F E + +M
Sbjct: 433 IVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMS 492
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+PD VW ALLG C++H N+ELG KVA+ +I+L P + A YV+L +YA G+++ V+K
Sbjct: 493 CKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEK 552
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
R LM E+ IRKE G S ++V H F +KEE+ L+L L++
Sbjct: 553 VRELMDEKFIRKE-RGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLAR 602
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 161/333 (48%), Gaps = 47/333 (14%)
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRN 233
V N +I ++ CG AR +FD+MS R++ SWN M+ GY + GD++ A LF RM +++
Sbjct: 100 VANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKD 159
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
+ SWN+I+ + + G EA+ L+++ + + + + A VL C L + K
Sbjct: 160 VVSWNTIVLAYAKQGCFNEAIGLYRDFRRLD----MGFNAFSFAGVLILCVKLKELQLAK 215
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCG---C--------------------------- 323
VHG + +G ++V+ +++VD Y KCG C
Sbjct: 216 QVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWG 275
Query: 324 -VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
+ A +F +MP+K+ ++W+A+IS +A N G EA D F +M G+ P TF L
Sbjct: 276 DMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLC 335
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPH----VYHYACMIDILSRAGLFSEAERLIRSMPM 438
ACA ++ G+ H YL+ + + +ID+ S+ G+ + + M
Sbjct: 336 ACASIAALKHGK-----QVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGN 390
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
+ DV VW ++ +G+ GEK Q D+
Sbjct: 391 KQDVVVWNTMISALAQNGH---GEKAMQMFNDM 420
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 6/144 (4%)
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD-C 306
GR EAL + V P I + +L CA GK VH +L+ +G
Sbjct: 41 GRLPEALSYLDRLAQRGVR---LPTGIFV-DLLRLCAKAKYFKGGKCVHLHLKHTGFKRP 96
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF-REM 365
++ L+ MY +CG A VF +M ++ +W M++ +A G A F R M
Sbjct: 97 TTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMM 156
Query: 366 EAEGVRPNHVTFVGLLSACAHSGL 389
E + V N + C + +
Sbjct: 157 EKDVVSWNTIVLAYAKQGCFNEAI 180
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 4/163 (2%)
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
K+ P +L + + G EA + GVR FV LL CA + +
Sbjct: 20 KQRPDSTSLCIAQSLLDLSSQGRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFK 79
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
G+ + ++H P +I + G EA ++ M + +++ W +L G
Sbjct: 80 GGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVR-NLYSWNHMLAG 138
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
G+V K+ +++ D ++ + + YAK G F++
Sbjct: 139 YAKLGDVNNARKLFDRMMEKDVVS---WNTIVLAYAKQGCFNE 178
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 263/469 (56%), Gaps = 44/469 (9%)
Query: 60 NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
+ H +++ + G ++ A +F I D+ ++N MI A ET + +
Sbjct: 149 SSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYA----ETGN--NK 202
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L+L+K+M+ T + PD T ++ C + +G V+ + G ++ + N++I
Sbjct: 203 EALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALI 262
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
L++ C G+++ A LF + +++ SWN+
Sbjct: 263 DLYIKC-------------------------------GEVETACGLFEGLSYKDVISWNT 291
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I G+ +EAL LFQEM S P+ +T+ S+L ACA+LGAI+ G+W+H Y+
Sbjct: 292 LIGGYTHMNLYKEALLLFQEMLRSGE----SPNDVTMLSILPACAHLGAIEIGRWIHVYI 347
Query: 300 --RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
R G+ T+L+DMY KCG +E A VF + + +W AMI FA++G
Sbjct: 348 NKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANA 407
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
AFD F M + P+ +TFVGLLSAC+HSG+++ GR F M+ Y + P + HY CMI
Sbjct: 408 AFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMI 467
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L +GLF EAE +I +M MEPD +W +LL C+MHGNVELGE AQ LI ++P N
Sbjct: 468 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPG 527
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L ++YA AGR+++V K R L+ ++G++K VPGCSS+E+D VVHEF
Sbjct: 528 SYVLLSNIYATAGRWNEVAKIRALLNDKGMKK-VPGCSSIEIDSVVHEF 575
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 235/415 (56%), Gaps = 16/415 (3%)
Query: 44 LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS-GSLSYATNVFSHIKRSDLYTYNIM 102
L+ IH Q+IK+ TN +++L+ FC LS L YA +VF I+ +L +N M
Sbjct: 3 LRMIHAQMIKTGLHNTN---YALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTM 59
Query: 103 IRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
R +A S + L LY M+ G+ P+C TFPFLLK C K G ++G
Sbjct: 60 FRGHALSSDPVS------ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGH 113
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
V+K G D++V S+IS+++ G + AR +FD+ S+RDVVS+ A+I GY G + A
Sbjct: 114 VLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASA 173
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
+F + +++ SWN++I+G+ + G +EALELF+EM ++ V+PD+ T+ SV+SA
Sbjct: 174 QKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN----VRPDESTMVSVVSA 229
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
CA +I+ G+ VH ++ G ++ I AL+D+Y KCG VE A G+F+ + KD ++W
Sbjct: 230 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISW 289
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-R 401
+I + KEA F+EM G PN VT + +L ACAH G +E GRW V + +
Sbjct: 290 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK 349
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ V H +ID+ ++ G A+++ S+ + + W A++ G MHG
Sbjct: 350 RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMHG 403
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 197/598 (32%), Positives = 305/598 (51%), Gaps = 87/598 (14%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+D + R L +IH Q++ S +++ L+T+ F A G + YA VF
Sbjct: 78 LDHSVHKRHLNQIHAQLVVSGLVESG---FLVTK--FVNASWNIGEIGYARKVFDEFPEP 132
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
++ +N +IR ++ G +++Y +M +G++PD T P +LK C+
Sbjct: 133 SVFLWNAIIRG------YSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLE 186
Query: 155 VGASVYGQVVKFGVCDDVFVQN-------------------------------SVISLFM 183
VG V+GQ+ + G DVFVQN S+IS +
Sbjct: 187 VGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYG 246
Query: 184 ACGFVTSARMLFDEMSNRDV-VSWNAMI------------------------IG------ 212
G A +F +M R+V W A++ +G
Sbjct: 247 QNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPD 306
Query: 213 --------YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
Y + G + VA F +M+ N+ WN++I+G+ + G EA+ LFQEM S +
Sbjct: 307 LLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKN 366
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
+ + D IT+ S + ACA +G++D KW+ Y+ ++ DV + TAL+DM+ KCG V
Sbjct: 367 I----RTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSV 422
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
+ A VF KD + W+AMI + L+G G++A D F M+ GV PN VTFVGLL+AC
Sbjct: 423 DLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTAC 482
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
HSGLVE+G F M++ Y +E HYAC++D+L R+G +EA I +MP+EP V V
Sbjct: 483 NHSGLVEEGWELFHSMKY-YGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSV 541
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
WGALLG C+++ +V LGE A+ L LDP N YV L ++YA + +D V K R LM+E
Sbjct: 542 WGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMRE 601
Query: 505 RGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGL 562
+G+ K++ G S +E++G + F + +E+ L L + +K GF +I +
Sbjct: 602 KGLSKDL-GYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESV 658
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 187/515 (36%), Positives = 284/515 (55%), Gaps = 52/515 (10%)
Query: 19 VSPPNKE--STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLIT--RLLFFCA 74
+SP N T+ L N + C + LK+IH +I T +H+LI +++ FCA
Sbjct: 1 MSPKNTTLWKTEQTLMNLFNHCSTLNHLKQIHARI-----FLTGFNHNLILSGKIIMFCA 55
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS 134
VS +++YA NVF I + D + +N MIR + THS + +K+M
Sbjct: 56 --VSQNMNYALNVFDKIPKPDSFLWNTMIRGFG-----NSTTHSHNAIHFFKRMQLAH-R 107
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
PD TF F+LK + +G ++ + KFG + +V+NS+I ++
Sbjct: 108 PDNFTFSFILKIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMY------------ 155
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
G L+ D+++A LF M + N+ SWNSII V G+ EA+
Sbjct: 156 -----------------GMLK--DIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAI 196
Query: 255 ELFQEMQSSSVEEM-VKPDKITIASVLSACAYLGAIDHGKWVHGYLRR--SGLDCDVVIG 311
+LF +M M ++PD T+ LSAC +G++D G+ VH ++R + + +
Sbjct: 197 DLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVF 256
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV- 370
ALVDMY KCG VE AY F M +K+ ++W MI FA +G G+EA F M E V
Sbjct: 257 NALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVE 316
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
RP+ +TF+ +L AC+H GLV++GR F +M Y ++P + HY CM+D+L RAGLF EA
Sbjct: 317 RPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAY 376
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
LI+SMP+E + +W LL C+ +GNVELGEKV ++L++L+P + + YV L +MYA G
Sbjct: 377 ELIKSMPVECNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYASTG 436
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHE 525
+++++ K R M+ER +RK PG S + + G E
Sbjct: 437 QWNEMSKERRSMQERRVRKPEPGNSFIGIPGTRFE 471
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/474 (36%), Positives = 276/474 (58%), Gaps = 12/474 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F + D+ ++N M+ A A KS ND L+ Y+++ GI +
Sbjct: 131 GKIKPARKLFDKMPEKDVVSWNTMVIAYA-KSGFCNDA-----LRFYRELRRLGIGYNEY 184
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+F LL C K + + +GQV+ G ++ + +SV+ + C + AR LFDEM
Sbjct: 185 SFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEM 244
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
RDV++W M+ GY + GD++ A +LF M ++N +W S+I G+ + +ALELF
Sbjct: 245 IIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFT 304
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+M + ++ +PD+ T +S L A A + +++HGK +HGYL R+ + + ++ ++L+DMY
Sbjct: 305 KMMALNI----RPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMY 360
Query: 319 GKCGCVERAYGVFKEMPKK-DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
KCGC+E VF M K D + W +IS A +G G+EA F +M G++P+ +T
Sbjct: 361 SKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITL 420
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+ LL+AC+HSGLV++G + + + V P+ HYAC+ID+L RAG F + MP
Sbjct: 421 IVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMP 480
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+P+ +W ALLG C+MHGN+E G +VA+ +I+LDP + A YV L ++A GR++ V+
Sbjct: 481 CKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVEN 540
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
R LM ER +RK+ S +E++ VH F+ +KE + L L L+ M+
Sbjct: 541 VRQLMNERHVRKD-RAISWIEIENKVHSFTASDRLHPLKEVIYLALKQLAGHME 593
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 177/377 (46%), Gaps = 48/377 (12%)
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVC-DDVFVQNSVISLFMACGFVT 189
GI T +LL++C +G V+ + G+ + F+ N +I+++ CG
Sbjct: 44 NGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYP 103
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
SA +FDEMS R++ SWN M+ GY + G + A LF +M ++++ SWN+++ + + G
Sbjct: 104 SAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGF 163
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
+AL ++E++ + ++ + A +L+ C + ++ K HG + +G ++V
Sbjct: 164 CNDALRFYRELRRLGIGY----NEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLV 219
Query: 310 IGTALVDMYGKC-------------------------------GCVERAYGVFKEMPKKD 338
I ++++D Y KC G VE A +F MP+K+
Sbjct: 220 ISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKN 279
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
+AWT++I+ +A + G +A + F +M A +RP+ TF L A A + G+
Sbjct: 280 PVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGK---- 335
Query: 399 MMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
H YL + P+ + +ID+ S+ G + M + DV +W ++
Sbjct: 336 -QIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQ 394
Query: 455 HGNVELGEKVAQYLIDL 471
HG G++ Q D+
Sbjct: 395 HGR---GQEAIQMFDDM 408
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Query: 347 SVFALNGYGK--EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
S+ L+ G+ +A + + G+R T LL CA++ ++ G+W + ++
Sbjct: 21 SLLHLSSQGQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTG 80
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
L P+ + +I++ S+ G + A ++ M +++ W +L G G ++ K+
Sbjct: 81 LKRPNTFLANHLINMYSKCGDYPSAYKVFDEMSTR-NLYSWNGMLSGYAKLGKIKPARKL 139
Query: 465 AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+ + D ++ + + YAK+G +D + ++ GI
Sbjct: 140 FDKMPEKDVVS---WNTMVIAYAKSGFCNDALRFYRELRRLGI 179
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 267/460 (58%), Gaps = 12/460 (2%)
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
L YN MI S N + L++ ++M+ +GI D T+P +++ C +
Sbjct: 251 LVAYNAMI------SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G V+ V++ F NS++SL+ CG AR +F++M +D+VSWNA++ GY+
Sbjct: 305 GKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVS 363
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
SG + A +F+ MK++NI SW +I+G + G E L+LF M+ E P
Sbjct: 364 SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE----PCDYA 419
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ + +CA LGA +G+ H L + G D + G AL+ MY KCG VE A VF+ MP
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
D+++W A+I+ +G+G EA D + EM +G+RP+ +T + +L+AC+H+GLV++GR
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M VY + P HYA +ID+L R+G FS+AE +I S+P +P +W ALL GC++H
Sbjct: 540 YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
GN+ELG A L L P + Y+ L +M+A G++++V + R LM++RG++KEV CS
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEV-ACS 658
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+E++ VH F + + E + + L L K M+ G+
Sbjct: 659 WIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGY 698
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 54/353 (15%)
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+R + +V+G ++ FG + N +I ++ + AR LFDE+S D ++
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 209 MIIGYLRSGDLDVALDLFRRMK--KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
M+ GY SGD+ +A +F + R+ +N++ITGF A+ LF +M+
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMK----H 141
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWV--HGYLRRSGLDCDVVIGTALVDMYGKCGC- 323
E KPD T ASVL+ A L A D + V H +SG + ALV +Y KC
Sbjct: 142 EGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASS 200
Query: 324 ---VERAYGVFKEMPKKDTLAWTAMISVFALNGY-------------------------- 354
+ A VF E+ +KD +WT M++ + NGY
Sbjct: 201 PSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260
Query: 355 ------GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV-- 406
+EA + R M + G+ + T+ ++ ACA +GL++ G+ H Y++
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV-----HAYVLRR 315
Query: 407 EPHVYHY-ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
E +H+ ++ + + G F EA + MP + D+ W ALL G G++
Sbjct: 316 EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHI 367
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 174/486 (35%), Positives = 278/486 (57%), Gaps = 13/486 (2%)
Query: 69 LLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM 128
LL ++ +++ + I+R + T + + + T + + K + M
Sbjct: 3 LLPVVGITSPALITHKNHANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDM 62
Query: 129 LCTGISPDCLTFPFLLKECTKRLDG--LVGASVYGQVVKFGVC-DDVFVQNSVISLFMAC 185
G+ P+ +TF LL C G +G ++G K G+ + V V ++I ++
Sbjct: 63 TLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKR 122
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
G AR++FD M +++ V+WN MI GY+RSG +D A +F +M +R++ SW ++I GFV
Sbjct: 123 GRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFV 182
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
+ G EAL F+EMQ S V KPD + I + L+AC LGA+ G WVH Y+
Sbjct: 183 KKGYQEEALLWFREMQISGV----KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK 238
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
+V + +L+D+Y +CGCVE A VF M K+ ++W ++I FA NG E+ FR+M
Sbjct: 239 NNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM 298
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
+ +G +P+ VTF G L+AC+H GLVE+G F +M+ Y + P + HY C++D+ SRAG
Sbjct: 299 QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGR 358
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHG-NVELGEKVAQYLIDLDPLNHAFYVNLCD 484
+A +L++SMPM+P+ V G+LL C HG N+ L E++ ++L DL+ +H+ YV L +
Sbjct: 359 LEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSN 418
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKV----VKEELV 540
MYA G+++ K R MK G++K+ PG SS+E+D +H F + V ++E L
Sbjct: 419 MYAADGKWEGASKMRRKMKGLGLKKQ-PGFSSIEIDDCMHVFMAGDNAHVETTYIREVLE 477
Query: 541 LILNGL 546
LI + L
Sbjct: 478 LISSDL 483
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 281/500 (56%), Gaps = 18/500 (3%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + +D+C N+ ++K+IH +++ Q+ + + R L + + Y V
Sbjct: 53 LISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD---PYPRRVIEP 109
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
++ + + + +IR T + + + +Y M I+P TF LLK C
Sbjct: 110 VQFRNPFLWTAVIRG------YTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSM 163
Query: 151 LDGLVGASVYGQVVKF-GVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
D +G + Q + G C V+V N++I +++ CG + AR +FDEM RDV+SW +
Sbjct: 164 GDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTEL 222
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I Y R G+++ A DLF + +++ +W +++TGF Q + +EALE F M+ S +
Sbjct: 223 IAAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI---- 278
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD--VVIGTALVDMYGKCGCVERA 327
+ D++T+A +SACA LGA + ++SG VVIG+AL+DMY KCG VE A
Sbjct: 279 RADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEA 338
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAH 386
VF M K+ ++++MI A +G +EA D F M + ++PN VTFVG L+AC+H
Sbjct: 339 VNVFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSH 398
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
SGLV++GR F M + VEP HY CM+D+L RAG EA LI++M +EP VWG
Sbjct: 399 SGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWG 458
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALLG C++H N ++ E A++L +L+P Y+ L ++Y+ AG + V R L+KE+G
Sbjct: 459 ALLGACRIHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKG 518
Query: 507 IRKEVPGCSSVEVDGVVHEF 526
++K V+ +G +H+F
Sbjct: 519 LKKTPAVSWVVDKNGQMHKF 538
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 276/487 (56%), Gaps = 18/487 (3%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S G + A VF ++ ++ ++N +I + + + + L+ + +M G P
Sbjct: 202 SKCGLVGCARRVFDGMEEKNVVSWNCLI------TCYEQNGPAIEALEAFGRMTELGFKP 255
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARML 194
D +T ++ C G ++ +VVK +D+ + N+++ ++ CG V AR +
Sbjct: 256 DEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCV 315
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD M R+ VS M+ GY +S + A +F +K+++I SWN++I G+ Q G EAL
Sbjct: 316 FDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEAL 375
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH------GYLRRSGLDCDV 308
LF+ ++ E V P T ++L+A A L ++ G+ H G+ +SG + D+
Sbjct: 376 GLFRMLK----RESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDI 431
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
+G +L+DMY KCG VE VF+ M +KD ++W MI +A NGYG EA + F++M
Sbjct: 432 FVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLES 491
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
G +P+HVT +G L AC+H+GLVE+GR F M + + P HY CM+D+L RAG E
Sbjct: 492 GEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEE 551
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A+ LI SMP +PD VW +LL C++H N+ LG+ VA+ + ++DP + YV L +MY++
Sbjct: 552 AKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSE 611
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
GR+ D R LM+ RG+ K+ PGCS +++ VH F +K K+E+ IL L+K
Sbjct: 612 LGRWGDAVSVRKLMRRRGVVKQ-PGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTK 670
Query: 549 IMKNGGF 555
M+ G+
Sbjct: 671 HMRQAGY 677
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 164/312 (52%), Gaps = 14/312 (4%)
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D F LL C K SV+G++++ C++VF+QN +I ++ CG++ AR +F
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D MS R+V S+N++I +R G +D + LF M +++ SWNS+I GF Q R EAL+
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
F M ++ V D + S LSAC+ L + G +HG + +S DV +G+ L+
Sbjct: 143 WFVRMHR---DDFVLND-YSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLI 198
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
D Y KCG V A VF M +K+ ++W +I+ + NG EA + F M G +P+ V
Sbjct: 199 DFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEV 258
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY-----ACMIDILSRAGLFSEAE 430
T ++SACA ++G + H +V+ + ++D+ ++ G +EA
Sbjct: 259 TLASVVSACATLAAFKEG-----VQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEAR 313
Query: 431 RLIRSMPMEPDV 442
+ MP+ V
Sbjct: 314 CVFDRMPVRNAV 325
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 197/599 (32%), Positives = 313/599 (52%), Gaps = 82/599 (13%)
Query: 23 NKES-TKLILR----NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV 77
N ES T+L+L+ N + + K ++ ++H LQ RLL A
Sbjct: 21 NSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQN--------RLLHLYA--K 70
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTH-------------------- 117
SG+LS A ++F + R D++++N M+ A + KS D
Sbjct: 71 SGNLSDARDLFDKMSRRDVFSWNAMLSAYS-KSGNVEDLRAVFDQMSVHDAVSYNTVIAG 129
Query: 118 ------SGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDD 171
S + L+ + +M G T +L C++ LD G ++G++V + +
Sbjct: 130 FSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGES 189
Query: 172 VFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD------------- 218
VFV N++ +++ CG + AR LFD M N++VVSWN+MI GYL++G
Sbjct: 190 VFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQS 249
Query: 219 ----------------------LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
+D A FR +K+++ W +++ G Q G+ +AL L
Sbjct: 250 SGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLL 309
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F+EM + E V+PD TI+SV+S+CA L ++ G+ VHG G+D D+++ +ALVD
Sbjct: 310 FREM----LLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVD 365
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG A+ VFK M ++ ++W +MI +A NG EA + EM E ++P+++T
Sbjct: 366 MYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNIT 425
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FVG+LSAC H+GLVE+G+ F + ++ + P HY+CMI++L RAG +A LI+SM
Sbjct: 426 FVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSM 485
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
EP+ +W LL C+++ +V GE A++L +LDP N Y+ L ++YA GR+ DV
Sbjct: 486 TFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVA 545
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R+LMK I+K S +E+D VH+F + E++ LN L K ++ GF
Sbjct: 546 AVRSLMKNNKIKK-FAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGF 603
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 288/521 (55%), Gaps = 19/521 (3%)
Query: 6 QMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSL 65
++ ++ L++P+ S +E + AI + +++ LK++ + +I S + H L
Sbjct: 4 RVTQFTYLHAPS--SHMAEELVNQFISAAISKSRHLNHLKQVQSFLIVSGLSHS---HFL 58
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
+LL FC L + +LSYA +F + + Y ++ S + H+ +
Sbjct: 59 CFKLLRFCTLRLC-NLSYARFIFDRFSFPNTHLYAAVLTG----YSSSLPLHASSAFSFF 113
Query: 126 KQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI-SLFM 183
+ M+ P+ +P +LK V+ + K G V VQ +++ S
Sbjct: 114 RLMVNRSFPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYAS 173
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
+ +T AR LFDEMS R+VVSW AM+ GY RSGD+ A+ LF M +R++ SWN+I+
Sbjct: 174 SVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDIFNAVALFEEMPERDVPSWNAILAA 233
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
Q G EA+ LF+ M + + ++P+++T+ VLSACA G + K +H + R
Sbjct: 234 CTQNGLFVEAVSLFRRMIN---DPCIRPNEVTLVCVLSACAQTGTLQLAKGIHAFAYRRN 290
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
L DV + +LVD+YGKCG +E A VFK KK AW +MI+ FAL+G +EA F
Sbjct: 291 LSSDVFVSNSLVDLYGKCGNLEEASSVFKMSSKKSLTAWNSMINCFALHGRSEEAIAVFE 350
Query: 364 EM---EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
+M + ++P+H+TF+GLL+AC H GLV KGR F +M+ + +EP + HY C+ID+L
Sbjct: 351 DMMKLNSHDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMKKRFGIEPRIEHYGCLIDLL 410
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
RAG F EA + +M ME D +WG+LL C+ +G+++L E + L+ L+P N +
Sbjct: 411 GRAGQFDEALETMSTMKMEADEAIWGSLLNACKKYGHLDLAEVAVKNLVALNPNNGGYVA 470
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
+ ++Y + G +++ ++ R ++K + K PG S +E+D
Sbjct: 471 MMANLYGEMGNWEEARRARKMIKHQNAYKP-PGWSQIEIDN 510
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 285/531 (53%), Gaps = 52/531 (9%)
Query: 7 MVSYSLLNSPAKVSPPNKESTKLI------LRNAIDECKNMRELKEIHTQIIKSPC-LQT 59
M S L +P+ + P ++ L + C ++R L ++H +K+ LQ
Sbjct: 1 MSSSPLTATPSPLLPAKSKNPPPHHHHHNPLLAYLPHCTSLRALAQLHAVAVKAGGGLQA 60
Query: 60 NDHHSLITRLLFFC---ALSVSGSLSYATNVFSHIKRS-DLYTYNIMIRANACKSSETND 115
H + +TRLL C L+YA VF I D+ YN ++R A
Sbjct: 61 --HPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVIWYNTLLRGYARGGGGGGG 118
Query: 116 THSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ 175
+++ +M+ G++PD TF LLK C G G +G VK G + +V
Sbjct: 119 AEEAA--RVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVA 176
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
++I+++ CG V +AR++FD M VVS+NAMI +RS AL LFR M+ + +
Sbjct: 177 PTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGL- 235
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
KP +T+ SVLSACA LGA++ G+W+
Sbjct: 236 ----------------------------------KPTSVTLISVLSACALLGALELGRWI 261
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H Y+R+ LD V + TAL+DMY KCG +E A GVF++M +D AW+ M+ +A +GYG
Sbjct: 262 HDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYG 321
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+EA F EM+ +G++P+ VTF+G+L AC+HSG+V +G F MR Y + + HY C
Sbjct: 322 REAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVSGIKHYGC 380
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
+ D+L+R+G A + I +P++P +W LL C HG+V++G++V + +++LD +
Sbjct: 381 VTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSH 440
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV ++ A GR++++ R LM E+G+ K VPGCSS+E+D +VHEF
Sbjct: 441 GGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVK-VPGCSSIEIDNMVHEF 490
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 277/451 (61%), Gaps = 10/451 (2%)
Query: 118 SGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS 177
+ + + + ML GI PD +T LL C + D + G S++ V + G+ + +
Sbjct: 218 AAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVA 277
Query: 178 VISLFMACGFVTSARMLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFS 236
+I ++ CG + A +FD + R SWNAMI GY + G +DVA LF +M+ R++ +
Sbjct: 278 LIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVT 337
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
+NS+ITG++ GGR REAL LF +M+ + + D T+ S+L+ACA LGA+ G+ +H
Sbjct: 338 FNSLITGYIHGGRLREALLLFMQMRRHDL----RADNFTMVSLLTACASLGALPQGRALH 393
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
+ + ++ D+ +GTAL+DMY KCG VE A VF+ M +D W+AMI+ A NG GK
Sbjct: 394 ACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGK 453
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
A + F M+ +G +PN VT++ +L+AC+HS L+++GR F MR ++ + P + HY CM
Sbjct: 454 AALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCM 513
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
ID+L R+GL EA L+R+MPM+P+ +W ++L C++H + L A++L+ L+P
Sbjct: 514 IDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDED 573
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM--KGSPKV 534
A YV L ++Y + +++D + R LM+ERG++K G SS+ V G VH+F + + P++
Sbjct: 574 AVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAA-GYSSITVAGQVHKFIVCDRTHPQI 632
Query: 535 VKEELVLILNGLSKIMKNGGFGQYIRGLSME 565
+ E+ ++ +++ +K+ G+ ++++
Sbjct: 633 M--EITAMMEEITRRLKSVGYSPITSQITVD 661
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 213/465 (45%), Gaps = 50/465 (10%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG-SLSYATNVFSHIKRSDLY 97
+++R+ E+H ++ S L S + L C L YA +F + S +
Sbjct: 10 RSVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCST-F 68
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK-RLDGLVG 156
++ +RA SS L LY++M TG+ D TF FL K C + R L+
Sbjct: 69 LFDTALRACFRASSGPESP-----LILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLC 123
Query: 157 ASVYGQVVKFGVCDDV-FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
++ + + V V N +I +++ G AR FD++ +D V+W +I G +
Sbjct: 124 QMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAK 183
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
G LD A L R RN+ SW +I+G+ + GRA EA++ F M S +E PD++T
Sbjct: 184 LGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIE----PDEVT 239
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV----- 330
+ +LSACA L + G+ +H + G+ + AL+DMY KCG + RA+ V
Sbjct: 240 VIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALG 299
Query: 331 ---------------------------FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
F +M +D + + ++I+ + G +EA F
Sbjct: 300 RGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFM 359
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
+M +R ++ T V LL+ACA G + +GR + LVE +Y ++D+ +
Sbjct: 360 QMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQ-RLVEVDIYLGTALLDMYLKC 418
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
G EA + ++M + DV W A++ G +G +G+ +Y
Sbjct: 419 GRVEEASLVFQAMSVR-DVHTWSAMIAGLAFNG---MGKAALEYF 459
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 285/531 (53%), Gaps = 52/531 (9%)
Query: 7 MVSYSLLNSPAKVSPPNKESTKLI------LRNAIDECKNMRELKEIHTQIIKSPC-LQT 59
M S L +P+ + P ++ L + C ++R L ++H +K+ LQ
Sbjct: 1 MSSSPLTATPSPLLPAKSKNPPPHHHHHNPLLAYLPHCTSLRALAQLHAVAVKAGGGLQA 60
Query: 60 NDHHSLITRLLFFC---ALSVSGSLSYATNVFSHIKRS-DLYTYNIMIRANACKSSETND 115
H + +TRLL C L+YA VF I D+ YN ++R A
Sbjct: 61 --HPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLRGYARGGGGGGG 118
Query: 116 THSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ 175
+++ +M+ G++PD TF LLK C G G +G VK G + +V
Sbjct: 119 AEEAA--RVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVA 176
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
++I+++ CG V +AR++FD M VVS+NAMI +RS AL LFR M+ + +
Sbjct: 177 PTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGL- 235
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
KP +T+ SVLSACA LGA++ G+W+
Sbjct: 236 ----------------------------------KPTSVTLISVLSACALLGALELGRWI 261
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H Y+R+ LD V + TAL+DMY KCG +E A GVF++M +D AW+ M+ +A +GYG
Sbjct: 262 HDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYG 321
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+EA F EM+ +G++P+ VTF+G+L AC+HSG+V +G F MR Y + + HY C
Sbjct: 322 REAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVSGIKHYGC 380
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
+ D+L+R+G A + I +P++P +W LL C HG+V++G++V + +++LD +
Sbjct: 381 VTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSH 440
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV ++ A GR++++ R LM E+G+ K VPGCSS+E+D +VHEF
Sbjct: 441 GGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVK-VPGCSSIEIDNMVHEF 490
>gi|15240355|ref|NP_200988.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171532|sp|Q9FLS9.1|PP441_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61800
gi|10176873|dbj|BAB10080.1| unnamed protein product [Arabidopsis thaliana]
gi|332010136|gb|AED97519.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 499
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 271/488 (55%), Gaps = 23/488 (4%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS-------LSYATNVFSH 90
C+ ++ L + H Q I S + + + + + F S+S S +SYAT+VF
Sbjct: 14 CRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRF 73
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
I + +N +IR C E + S + + +M + PD TFPF+ K C +
Sbjct: 74 ITNPSTFCFNTIIRI--CTLHEPSSLSSKR---FFVEMRRRSVPPDFHTFPFVFKACAAK 128
Query: 151 LDG--LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+G + +++ Q ++FG+ D+F N++I ++ + SA LFDE RDVV++N
Sbjct: 129 KNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNV 188
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+I G +++ ++ A +LF M R++ SWNS+I+G+ Q REA++LF EM V
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEM----VALG 244
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
+KPD + I S LSACA G GK +H Y +R L D + T LVD Y KCG ++ A
Sbjct: 245 LKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAM 304
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F+ K W AMI+ A++G G+ D FR+M + G++P+ VTF+ +L C+HSG
Sbjct: 305 EIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSG 364
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME----PDVFV 444
LV++ R F MR +Y V + HY CM D+L RAGL EA +I MP + +
Sbjct: 365 LVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLA 424
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM-K 503
W LLGGC++HGN+E+ EK A + L P + Y + +MYA A R+++V K R ++ +
Sbjct: 425 WSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDR 484
Query: 504 ERGIRKEV 511
++ ++K V
Sbjct: 485 DKKVKKNV 492
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 190/584 (32%), Positives = 306/584 (52%), Gaps = 81/584 (13%)
Query: 42 RELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNI 101
R +I + I S + +++ L + +LS +++ +F I + +++++N
Sbjct: 42 RSFNQILSHAIASGVFRD----PVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFSWNF 97
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
M RA + +SS +T + LY ML G PD +FPF+LK C + G ++
Sbjct: 98 MFRAYS-RSSFPAET-----IALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHS 151
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN--RDVVSWNAMIIGYLRSGDL 219
+K GV DVFVQN++IS F +CG V +AR +FD + RDVVSWN+MI GYL+S
Sbjct: 152 STLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRY 211
Query: 220 DVALDLFRRM-----------------------------KK-----------RNIFSWNS 239
++AL +F + KK ++F +S
Sbjct: 212 ELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSS 271
Query: 240 IITGFVQGGRAREALELFQEM----------------QSSSVEEMVK-----------PD 272
+I + + G+ +A ++F + QS +E ++ D
Sbjct: 272 LIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAAD 331
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
TIA VLSAC + GA+ G+W+H Y R+ ++ D+ AL+ MY KCG +++A +F
Sbjct: 332 AATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFH 391
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA-EGVRPNHVTFVGLLSACAHSGLVE 391
+ + D +W+A+IS A+NG +A F +ME +RPN +TF+G+L AC H G V+
Sbjct: 392 GLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVD 451
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
KG + F M +Y + P + HY CM+D+L RA L EAE+ IR++P++PDV +W +LL
Sbjct: 452 KGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFA 511
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C+ HGN+EL E A+ + +L+P V L ++YA A R+ DVK+ R M + I+K+
Sbjct: 512 CRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQ- 570
Query: 512 PGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
PGCS VE+DG+VHE + + + ++K +++ GF
Sbjct: 571 PGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINKALQSKGF 614
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 250/438 (57%), Gaps = 9/438 (2%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L+L+ +L +G PD + + L C + A ++G K G V+N +I
Sbjct: 60 LRLFDHLLRSGADPDPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRRVRNGLIHA 119
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG + AR +FD D+++WN ++ GY + D + F +M R+ SWN++I
Sbjct: 120 YSVCGMLFDARKVFDHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARDSVSWNTVI 179
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
V G EA+ +F+EM +S+ +PD++T+ SV+SA AYLGA+ G W H Y+ R
Sbjct: 180 AWCVANGEHEEAVAVFREMLASN---ECQPDRVTLVSVISAIAYLGALAQGLWAHAYVCR 236
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKE---MPKKDTLAWTAMISVFALNGYGKEA 358
++ D + +AL++MY KCG +E A VF+ + DT W AM++ F +G + A
Sbjct: 237 KEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDT--WNAMLAGFTASGCSERA 294
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
+ F ME+ G PN +TF LL+AC+H G VE+G F M + +EP + HY CM+D
Sbjct: 295 LELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYGCMVD 354
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+ RAGLF +AE +I+ MPMEPD VW AL+G C+ + N ELG+K LI+ P +HA
Sbjct: 355 LFCRAGLFEKAEEMIQMMPMEPDAAVWKALVGACRTYSNFELGKKAGHRLIEAAPNDHAG 414
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
YV L ++YA G + V K R LM G++K VPG SS+E+DGV+HEF K +
Sbjct: 415 YVLLSNIYALDGNWKGVYKVRKLMLNCGVQK-VPGSSSIELDGVIHEFISGDKSHSRKRD 473
Query: 539 LVLILNGLSKIMKNGGFG 556
+ +L+ + + +K G+
Sbjct: 474 VYEMLSEICQQLKVAGYA 491
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 302/551 (54%), Gaps = 60/551 (10%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSL-ITRLLFFCALSVSGSLSYATNVFSHIKR 93
+D+ ++ LK++H +++ L+ N + + R+ C G A ++F I
Sbjct: 28 LDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAAC-----GEPGLARHIFDEITD 82
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
++ +N+MIR S N+ L +YK M G PD T+P +LK ++
Sbjct: 83 KNVVFFNVMIR------SYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSL 136
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
VG ++G V+K G+ +++V N +I+++ C + A+ + DE+ RDVVSWN+M+ Y
Sbjct: 137 WVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVY 196
Query: 214 LRSGDLDVALDLFRRMK-------------------------------------KRNIFS 236
++G + AL+L R M+ K+++ S
Sbjct: 197 AQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVIS 256
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
WN +I +V +EA+ L+ +M+++ VE PD ++I SVL A L A+ G+ VH
Sbjct: 257 WNVMIAMYVNNSMPKEAVVLYSQMEANGVE----PDVVSIVSVLPAYGDLSALSLGRRVH 312
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
+ R L ++++ AL+DMY KCGC+ A VF +M +D ++WT++IS + G G+
Sbjct: 313 KFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGR 372
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
+A F EM G+ P+ + FV +L+AC+H+GL++ GR+ F +M + P + H+AC+
Sbjct: 373 DAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECG-ITPKLEHFACV 431
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
+D+L RAG EA IR MP+EPD VWG LL C+++ N+ +G A L+ L+P +
Sbjct: 432 VDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHS 491
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF-----SMKGS 531
+YV L ++YAKAGR+ DV R++M+ +GI+K +PG S+VE++ VH F S S
Sbjct: 492 GYYVLLSNIYAKAGRWADVAAIRSIMERKGIKK-LPGISNVELNDGVHTFLAGDHSHPQS 550
Query: 532 PKVVKEELVLI 542
K+ +E VL+
Sbjct: 551 KKIYEELDVLV 561
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 153/405 (37%), Positives = 247/405 (60%), Gaps = 8/405 (1%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECT--KRLDGLVGASVYGQVVKFGV-CDDVFVQNSVISL 181
+ +M G+ P+ +TF LL C +S++G K+G+ V V ++I +
Sbjct: 80 FTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDM 139
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ C + AR +F + ++ VSWN M+ G++R+G++++A+ LF M R+ SW ++I
Sbjct: 140 YSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALI 199
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
G ++ G + +ALE F +MQ S V D ++I +VL+ACA LGA+ G WVH ++
Sbjct: 200 NGLLKHGYSEQALECFHQMQRSGVAA----DYVSIIAVLAACADLGALTLGLWVHRFVMP 255
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
++ I +L+DMY +CGC+E A VF +M K+ ++W ++I FA+NG+ E+ +
Sbjct: 256 QEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEF 315
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F M+ EG +P+ V++ G L+AC+H+GLV KG F M+ V+ + P + HY C++D+
Sbjct: 316 FXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYG 375
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAG +A +I MPM+P+ V G+LL C+ HG+V L E++ ++L LDP A+YV
Sbjct: 376 RAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVL 435
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
L ++YA G++D R MK RG++K+ PG SSVE+DG VHEF
Sbjct: 436 LSNIYAAIGKWDGANNVRRTMKARGVQKK-PGYSSVEIDGKVHEF 479
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 145/364 (39%), Gaps = 86/364 (23%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G + A +F + D ++ +I + +S + L+ + QM +G++ D
Sbjct: 174 NGEIELAIQLFDEMPTRDAISWTALI------NGLLKHGYSEQALECFHQMQRSGVAADY 227
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
++ +L C +G V+ V+ D++ + NS+I ++ CG + AR +F +
Sbjct: 228 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 287
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI----FSWNSIITGFVQGGRAREA 253
M+ R +VSWN++I+G+ +G D +L+ F M+K S+ +T G +
Sbjct: 288 MAKRTLVSWNSIIVGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKG 347
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
LELF M+S + + + G I
Sbjct: 348 LELFDNMKS-------------VHKITPRIEHYGCI------------------------ 370
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
VD+YG+ G +E A + +EMP K PN
Sbjct: 371 -VDLYGRAGRLEDALNMIEEMPMK----------------------------------PN 395
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH-VYHYACMIDILSRAGLFSEAERL 432
V LL+AC G V +M+H++ ++P +Y + +I + G + A +
Sbjct: 396 EVVLGSLLAACRTHGDVNLAE---RLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNV 452
Query: 433 IRSM 436
R+M
Sbjct: 453 RRTM 456
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
WT+ ++ + NG EA F M GV PNH+TF+ LLSACA + F
Sbjct: 60 WTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACAD---FPSESFFFASSL 116
Query: 402 HVY-----LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
H Y L HV +ID+ S+ A ++ ++ ++ V W +L G +G
Sbjct: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSV-SWNTMLNGFMRNG 175
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVN 481
+EL ++ + D ++ +N
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALIN 200
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 173/468 (36%), Positives = 258/468 (55%), Gaps = 46/468 (9%)
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK- 120
H +++ + G + A +F I D+ ++N +I A DT + K
Sbjct: 166 HRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYA-------DTGNNKE 218
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L L+K+M+ T + PD T ++ C + +G V+ + G+ ++ + N++I
Sbjct: 219 ALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALID 278
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
L+ CG +++ A LF+ + +++ SWN++
Sbjct: 279 LYSKCG-------------------------------EVETACGLFQGLSNKDVISWNTM 307
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL- 299
I G+ +EAL LFQEM S P+ +T+ S+L ACA LGAID G+W+H Y+
Sbjct: 308 IGGYTHLNLYKEALLLFQEMLRSGE----NPNDVTMLSILPACAQLGAIDFGRWIHVYID 363
Query: 300 -RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
R G+ + T+L+DMY KCG +E A+ VF M + A AMI FA++G A
Sbjct: 364 KRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAA 423
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
FD F M G+ P+ +TFVGLLSAC+HSG+++ GR F M Y + P + HY CMID
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMID 483
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+L GLF EAE +I +M MEPD +W +LL C+MHGNVELGE AQ LI ++P N
Sbjct: 484 LLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGS 543
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L ++YA AGR+++V R L+ ++G++K VPGCSS+E+D VVHEF
Sbjct: 544 YVLLSNIYATAGRWNEVANIRALLNDKGMKK-VPGCSSIEIDSVVHEF 590
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 268/530 (50%), Gaps = 70/530 (13%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS-GSLSYATNVFSHIKR 93
+ CK ++ L+ IH Q+IK+ TN ++RLL FC LS + L YA +VF I+
Sbjct: 9 LHNCKTLQSLRIIHAQMIKTGLHNTN---YALSRLLEFCILSPNFDGLPYAISVFETIQE 65
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+L +N M R +A S + +KLY M+ G+ P+ TFPFLLK C K
Sbjct: 66 PNLLIWNTMFRGHALSSDPVS------AIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVS 119
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G ++G V+K G D++V S+IS+++ G A +FD S+RDVVS+ A+I GY
Sbjct: 120 KEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGY 179
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
G ++ A +F + +++ SWN+II+G+ G +EAL+LF+EM ++ VKPD+
Sbjct: 180 ASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTN----VKPDE 235
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
T+ +V+SACA G+I G+ VH ++ GL ++ I AL+D+Y KCG VE A G+F+
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295
Query: 334 MPKKDTLAWTAMISVFA-LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
+ KD ++W MI + LN Y KEA F+EM G PN VT + +L ACA G ++
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLY-KEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDF 354
Query: 393 GRWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP-------------- 437
GRW V + + + V +ID+ ++ G A ++ SM
Sbjct: 355 GRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGF 414
Query: 438 --------------------MEPDVFVWGALLGGCQMHGNVELGEKVAQYLID---LDP- 473
+EPD + LL C G ++LG ++ + + + P
Sbjct: 415 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPK 474
Query: 474 LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVV 523
L H Y + D+ G F + ++ N M ++E DGV+
Sbjct: 475 LEH--YGCMIDLLGHLGLFKEAEEMINTM-------------TMEPDGVI 509
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 292/562 (51%), Gaps = 71/562 (12%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIK--------------------------SP 55
PN + + ++ + K +E K+IH QI+K
Sbjct: 76 PNSYTFPFLFKSCA-KSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHK 134
Query: 56 CLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETND 115
T+ H +++ + G++ A +F I D+ ++N MI A
Sbjct: 135 VFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYA------EI 188
Query: 116 THSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ 175
+ L+L+ +M+ + PD T +L CT + +G ++ + G ++ +
Sbjct: 189 GRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLV 248
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
N++I L+ CG +++ A LF ++ +++
Sbjct: 249 NALIDLYSKCG-------------------------------EMERAHGLFEGLQYKDVI 277
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SWN++I G+ +EAL +FQEM ++ P+ +T+ S+L ACA+LGAID G+W+
Sbjct: 278 SWNTLIGGYAYINHHKEALLVFQEM----LKLGETPNDVTMLSILPACAHLGAIDIGRWI 333
Query: 296 HGYLRRS--GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG 353
H Y+ + G+ + + T+L+DMY KCG +E A VF + K + AMI FA++G
Sbjct: 334 HVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHG 393
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
AFD M+ +G+ P+ +TFVGLLSAC+H+GL + GR F M Y +EP + HY
Sbjct: 394 RADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHY 453
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP 473
CMID+L R+GLF EAE LI SM MEPD +WG+LL C++H N+ELGE +AQ L+ ++P
Sbjct: 454 GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEP 513
Query: 474 LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPK 533
N YV L ++YA + R+DDV + R L+ ++G++K VPGCSS+E+D +VHEF +
Sbjct: 514 KNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKK-VPGCSSIEIDSMVHEFLIGDKFH 572
Query: 534 VVKEELVLILNGLSKIMKNGGF 555
+E+ +L + ++ GF
Sbjct: 573 PQNKEIYKMLEEIDSLLAETGF 594
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 256/503 (50%), Gaps = 75/503 (14%)
Query: 66 ITRLLFFCALS-VSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKL 124
+++LL FC L+ L YA +VF I+ + ++N MIR +A S + L L
Sbjct: 12 LSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPIS------ALNL 65
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMA 184
Y M+ G+SP+ TFPFL K C K G ++ Q++K+G+ D+ V S+IS++
Sbjct: 66 YVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQ 125
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
G V A +FD S+RDVVS+ AMI GY G++D A +F + +++ SWN++I+G+
Sbjct: 126 NGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGY 185
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
+ GR +EALELF EM VKPD+ T+A+VLS C + G ++ G+ +H ++ G
Sbjct: 186 AEIGRYKEALELFNEMMKMD----VKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGF 241
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
++ + AL+D+Y KCG +ERA+G+F+ + KD ++W +I +A + KEA F+E
Sbjct: 242 GSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQE 301
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL------VEPHVYHYACMID 418
M G PN VT + +L ACAH G ++ GRW HVY+ + + +ID
Sbjct: 302 MLKLGETPNDVTMLSILPACAHLGAIDIGRWI-----HVYIDKKLKGIITNTSLQTSLID 356
Query: 419 ILSRAGLFSEAERLIRSM----------------------------------PMEPDVFV 444
+ ++ G A ++ ++ +EPD
Sbjct: 357 MYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDIT 416
Query: 445 WGALLGGCQMHGNVELGEKVAQYLI---DLDP-LNHAFYVNLCDMYAKAGRFDDVKKTRN 500
+ LL C G +LG K+ + + ++P L H Y + D+ ++G F + ++ N
Sbjct: 417 FVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEH--YGCMIDLLGRSGLFKEAEELIN 474
Query: 501 LMKERGIRKEVPGCSSVEVDGVV 523
M ++E DGV+
Sbjct: 475 SM-------------TMEPDGVI 484
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 287/522 (54%), Gaps = 23/522 (4%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ CK++ L +IH QII S HH IT L+ +L L A +VF
Sbjct: 59 LSSCKHLNPLLQIHAQIIVSGF----KHHHSITHLINLYSLFHKCDL--ARSVFDSTPNP 112
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRLDG 153
+N MIRA +S + N+ L++Y M+ G + D L+ +K D
Sbjct: 113 SRILWNSMIRAYT-RSKQYNEA-----LEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDL 166
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
V+ ++ K DV N++I+ AR +FD+M ++D VSW M+ GY
Sbjct: 167 KRAREVFDKMPK----RDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGY 222
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
+G L+LF +MK N+ +WN II ++Q G A+EA+ F +M+ E P+
Sbjct: 223 AHNGCFVEVLELFDKMKLGNV-TWNVIIAAYMQNGHAKEAISSFHQMRL----ENFHPNS 277
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+T SVL A AYL A G H + + G + ++G +L+DMY KCG ++ + +F E
Sbjct: 278 VTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNE 337
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M KDT++W AM+S +A++G+G A F M+ V+ + V+FV +LSAC H+GLVE+G
Sbjct: 338 MDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEG 397
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R F M Y ++P + HYACM+D+L RAGLF E I+ MP+EPD VWGALLG C+
Sbjct: 398 RKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCR 457
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
MH NV+LGE +L+ L+P N A +V L +YA++GR+ D K R+ M + G++K PG
Sbjct: 458 MHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKK-TPG 516
Query: 514 CSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
CS VE+ VH F + E + L+ N L + M+ G+
Sbjct: 517 CSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGY 558
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 243/385 (63%), Gaps = 5/385 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DVF+ N +++ ++ G V AR +FD M RD+VSWN MI GY +G++D+A ++F M
Sbjct: 105 DVFLCNVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMD 164
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
R+ FSW+S+++ + +G R+++ALEL++EM+++ V PD T+ SVLSAC+ +GA+
Sbjct: 165 DRDAFSWSSMMSAYTKGRRSKDALELWREMRAACV----NPDCTTMVSVLSACSDMGALA 220
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G VH ++ +G++ DV +GTAL+DMY KCG +E + VF MP KD L W++MI A
Sbjct: 221 VGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLA 280
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
+G+G +A F M +EG++PN VTF+G+L +C H GLV G+ F M V+ V P V
Sbjct: 281 NHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKV 340
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+D+L R+G EA++LIR MP EPD +W ALLG C+++ NVE+ E+ L
Sbjct: 341 QHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRV 400
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
LDP YV L ++YA+A ++ V + R ++ I++ +PG SS+E +HEF
Sbjct: 401 LDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQR-IPGRSSIEWQNTIHEFISGD 459
Query: 531 SPKVVKEELVLILNGLSKIMKNGGF 555
+E+ +L + ++ G+
Sbjct: 460 RSHPRSKEIYKMLGEMMDRLRQAGY 484
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 43/273 (15%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
+V+G + A VF+ + D ++++ M+ S+ T S L+L+++M ++P
Sbjct: 148 AVNGEVDLAREVFNGMDDRDAFSWSSMM------SAYTKGRRSKDALELWREMRAACVNP 201
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
DC T +L C+ VGA V+ V GV DV + ++I ++ CG + ++ +F
Sbjct: 202 DCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVF 261
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
M +DV++W++MIIG G AL LF RM
Sbjct: 262 HSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRM-------------------------- 295
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTAL 314
+ E ++P+++T VL +C +LG + G K+ G+ V +
Sbjct: 296 ---------LSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCM 346
Query: 315 VDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
VD+ G+ G +E A + ++MP + D + W A++
Sbjct: 347 VDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALL 379
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 253/443 (57%), Gaps = 58/443 (13%)
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG------ 186
++P+ TFP L+K C + G ++ +++KFG D+FV+NS+I ++ CG
Sbjct: 6 VAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDAR 65
Query: 187 ----------FVT---------------SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
VT +AR LF+EM RD+ SWN+MI GY+ +GD+
Sbjct: 66 AMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTA 125
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV---------------- 265
A DLF +M R+I SWN +I G+ Q A ELF M +V
Sbjct: 126 AEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDY 185
Query: 266 EEMVK----------PDKITIASVLSACAYLGAIDHGKWVHGYLRRSG-LDCDVVIGTAL 314
+E ++ P++ T+ SVL+ACA+LG +D GKW+H Y++ + ++ DV++ TAL
Sbjct: 186 DECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTAL 245
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+ MY KCG ++ A VF +M + ++W +MI + ++G +A + F +ME G PN
Sbjct: 246 LTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPND 305
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
TF+ +LSACAHSG++ +G W F +MR Y +EP V HY CM+D+L RAGL + E LIR
Sbjct: 306 ATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIR 365
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
MPME +WGALL C+ H N EL E VA+ LI+L+P + Y+ L ++YA G++DD
Sbjct: 366 KMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDD 425
Query: 495 VKKTRNLMKERGIRKEVPGCSSV 517
V+ R +MKERG+ K SS+
Sbjct: 426 VEIVRKMMKERGLTKTTGLSSSL 448
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 46/279 (16%)
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
V + V P+ T ++ C +G+I G+ +H + + G + D+ + +L+ MY CG +
Sbjct: 2 VRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRI 61
Query: 325 ERAYG-------------------------------VFKEMPKKDTLAWTAMISVFALNG 353
A +F+EMP++D +W +MI+ + NG
Sbjct: 62 GDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNG 121
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
A D F +M + V++ ++ A +E F M + +V +
Sbjct: 122 DMTAAEDLFNKMPFRDI----VSWNCMIDGYAQVQNMEIACELFNWMPY-----RNVVSW 172
Query: 414 ACMIDILSRAGLFSEAERLIRSMPME--PDVFVWGALLGGCQMHGNVELGEKVAQYLID- 470
M+ + R + E R+ M E P+ ++L C G ++ G+ + Y+ +
Sbjct: 173 NIMLALYVRIKDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNN 232
Query: 471 --LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
++P + L MYAK G D + + M R +
Sbjct: 233 RVIEP-DVLLSTALLTMYAKCGAMDLARDVFDKMSNRSV 270
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 243/385 (63%), Gaps = 5/385 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DVF+ N +++ +++ V AR +FD M RD+VSWN MI GY G++ +A ++F +
Sbjct: 22 DVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTE 81
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
R+ FSW+S+I+ + + R++EALEL++EM ++S+ PD IT+ SV+SAC+ LGA+
Sbjct: 82 DRDAFSWSSMISAYAKSRRSKEALELWREMHAASI----IPDCITLVSVVSACSDLGALA 137
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G VH ++ + ++ D+ +GTAL+DMY KCG +E A VF MP+KD W++MI A
Sbjct: 138 VGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLA 197
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
+G G E+ F +M +EG++PN VTFVG+L AC H GLV +G+ F M V+ +EP V
Sbjct: 198 NHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTV 257
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+D+L R+G EA +LIRSM EPD +W ALLG C++H NVE+ E+ L
Sbjct: 258 EHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRV 317
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
LDPL YV L ++YA+A ++ V + R ++ I++ +PG SS+E D +HEF
Sbjct: 318 LDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQR-IPGRSSIEWDEKIHEFVSGD 376
Query: 531 SPKVVKEELVLILNGLSKIMKNGGF 555
+E+ +L + +K G+
Sbjct: 377 RLHPRSKEIYRVLEEMMDRLKQAGY 401
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 49/276 (17%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
++ G + A +F + D ++++ MI A A S + L+L+++M I P
Sbjct: 65 AMRGEVGLAREIFDGTEDRDAFSWSSMISAYA------KSRRSKEALELWREMHAASIIP 118
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
DC+T ++ C+ VGA V+ V + D+ + ++I ++ CG + SA+ +F
Sbjct: 119 DCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVF 178
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D M +DV +W++MII G G E+L
Sbjct: 179 DRMPEKDVQTWSSMII-------------------------------GLANHGLGHESLS 207
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR----SGLDCDVVIG 311
LF +M + E +KP+ +T VL AC ++G + GK Y R G++ V
Sbjct: 208 LFSKM----ISEGMKPNGVTFVGVLIACTHVGLVSEGK---KYFRSMNEVHGIEPTVEHY 260
Query: 312 TALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
+VD+ G+ G VE A + + M + DT+ W A++
Sbjct: 261 GCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALL 296
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 188/589 (31%), Positives = 288/589 (48%), Gaps = 83/589 (14%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C L +I QI+ + L+ ND+ F A + G + A VF + +
Sbjct: 32 CGTCVRLHQIQAQIV-THGLEGNDY----VTPSFITACARLGGIRRARRVFDKTAQPNGA 86
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
T+N M R A + + + L+ +M G SP+C TFP ++K C G
Sbjct: 87 TWNAMFRGYAQANCHLD------VVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEGE 140
Query: 158 SVYGQVVKFG----------------------VCD-----------DVFVQNSVISLFMA 184
V+ V K G V D +VF ++++ +A
Sbjct: 141 EVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVA 200
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
C + SAR LFD RDVV WN ++ GY+ GD+ A +LF RM R++ SWN++++G+
Sbjct: 201 CRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGY 260
Query: 245 VQGGRAREALELFQEMQSSSV--------------------------------------E 266
G ++LF+EM +V +
Sbjct: 261 ATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSD 320
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+V P+ T+ +VL+AC+ LG ++ GKWVH Y G ++ +G AL+DMY KCG +E+
Sbjct: 321 GVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEK 380
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A VF + KD + W +I+ A++G+ +A F M+ G RP+ VTFVG+LSAC H
Sbjct: 381 ALDVFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTH 440
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
GLV G F M Y + P + HY CM+D+L RAGL +A ++R MPMEPD +W
Sbjct: 441 MGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIWA 500
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALLG C+M+ NVE+ E Q LI+L+P N +V + ++Y GR DV + + M++ G
Sbjct: 501 ALLGACRMYKNVEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDTG 560
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
RK VPGCS + + + EF + + L GL+ ++++ G+
Sbjct: 561 FRK-VPGCSVIGCNDSMVEFYSLDERHPETDSIYRALQGLTILLRSHGY 608
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/405 (37%), Positives = 247/405 (60%), Gaps = 8/405 (1%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECT--KRLDGLVGASVYGQVVKFGV-CDDVFVQNSVISL 181
+ +M G+ P+ +TF LL C +S++G K+G+ V V ++I +
Sbjct: 80 FTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDM 139
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ C + AR +F + ++ VSWN M+ G++R+G++++A+ LF M R+ SW ++I
Sbjct: 140 YSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALI 199
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
G ++ G + +ALE F +MQ S V D ++I +VL+ACA LGA+ G WVH ++
Sbjct: 200 NGLLKHGYSEQALECFHQMQRSGVAA----DYVSIIAVLAACADLGALTLGLWVHRFVMP 255
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
++ I +L+DMY +CGC+E A VF +M K+ ++W ++I FA+NG+ E+ +
Sbjct: 256 QEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEF 315
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F M+ EG +P+ V++ G L+AC+H+GLV KG F M+ V+ + P + HY C++D+
Sbjct: 316 FYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYG 375
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAG +A +I MPM+P+ V G+LL C+ HG+V L E++ ++L LDP A+YV
Sbjct: 376 RAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVL 435
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
L ++YA G++D R MK RG++K+ PG SSVE+DG VHEF
Sbjct: 436 LSNIYAAIGKWDGANNVRRTMKARGVQKK-PGYSSVEIDGKVHEF 479
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 145/364 (39%), Gaps = 86/364 (23%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G + A +F + D ++ +I + +S + L+ + QM +G++ D
Sbjct: 174 NGEIELAIQLFDEMPTRDAISWTALI------NGLLKHGYSEQALECFHQMQRSGVAADY 227
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
++ +L C +G V+ V+ D++ + NS+I ++ CG + AR +F +
Sbjct: 228 VSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVK 287
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI----FSWNSIITGFVQGGRAREA 253
M+ R +VSWN++I+G+ +G D +L+ F M+K S+ +T G +
Sbjct: 288 MAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKG 347
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
LELF M+S + + + G I
Sbjct: 348 LELFDNMKS-------------VHKITPRIEHYGCI------------------------ 370
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
VD+YG+ G +E A + +EMP K PN
Sbjct: 371 -VDLYGRAGRLEDALNMIEEMPMK----------------------------------PN 395
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH-VYHYACMIDILSRAGLFSEAERL 432
V LL+AC G V +M+H++ ++P +Y + +I + G + A +
Sbjct: 396 EVVLGSLLAACRTHGDVNLAE---RLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNV 452
Query: 433 IRSM 436
R+M
Sbjct: 453 RRTM 456
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
WT+ ++ + NG EA F M GV PNH+TF+ LLSACA + F
Sbjct: 60 WTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACAD---FPSESFFFASSL 116
Query: 402 HVY-----LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
H Y L HV +ID+ S+ A ++ ++ ++ V W +L G +G
Sbjct: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSV-SWNTMLNGFMRNG 175
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVN 481
+EL ++ + D ++ +N
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALIN 200
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 290/521 (55%), Gaps = 44/521 (8%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +C NM E K+ H +I+K L + L+ CALS GS+ YA ++F +
Sbjct: 38 LKKCSNMEEFKQSHARILK---LGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDEL 94
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ +N M+R + D ++ + L YK+M G+ PD T+P LLK C +
Sbjct: 95 GSFQFNTMMRGH------VKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVE 148
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G V+ ++K G+ +DVFVQNS+IS++ C
Sbjct: 149 EGMQVHAHILKLGLENDVFVQNSLISMYGKC----------------------------- 179
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
G++ V +F +M +R++ SW+++IT G + L L +M S E + ++
Sbjct: 180 --GEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDM---SNEGYWRAEES 234
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
+ SVLSAC +LGA+D G+ VHG+L R+ +V++ T+L++MY KCG + + +F++M
Sbjct: 235 ILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKM 294
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
KK+ L+++ MIS A++GYG+E F EM +G+ P+ + +VG+L+AC+H+GLV++G
Sbjct: 295 AKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGL 354
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
CF M+ + +EP + HY CM+D++ RAG EA LI+SMPMEP+ +W +LL ++
Sbjct: 355 QCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKV 414
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
H N++ GE A+ L LD + YV L +MYA+A R++DV KTR M +G+ + PG
Sbjct: 415 HNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQR-PGF 473
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
S VEV +H F + + E + +L + +K G+
Sbjct: 474 SLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGY 514
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 50/255 (19%)
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM--YGKCGCVERAYGVFKEMP 335
S+L C+ + + K H + + GL D + LV G ++ A +F++M
Sbjct: 36 SLLKKCSNM---EEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMD 92
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+ + + M+ + +EA T++EM GV+P++ T+ LL ACA VE+G
Sbjct: 93 ELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEG-- 150
Query: 396 CFVMMRHVYLV-----------------------------------EPHVYHYACMIDIL 420
M H +++ E V ++ +I
Sbjct: 151 ---MQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAH 207
Query: 421 SRAGLFSEAERLIRSMPME----PDVFVWGALLGGCQMHGNVELGEKVAQYLI-DLDPLN 475
+ G++S+ RL+ M E + + ++L C G ++LG V +L+ ++ LN
Sbjct: 208 ASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLN 267
Query: 476 HAFYVNLCDMYAKAG 490
+L +MY K G
Sbjct: 268 VIVETSLIEMYLKCG 282
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/437 (38%), Positives = 258/437 (59%), Gaps = 7/437 (1%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVIS 180
L+L+ +L +G PD + C + D A ++ K G V V+ ++
Sbjct: 60 LRLFDHLLRSGADPDPAAYELAFASCARARDRATAAQLHAHAAKRGLVASHRRVRCRLVH 119
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG-DLDVALDLFRRMKKRNIFSWNS 239
+ CG + AR +FD ++ D+V+WN ++ GY + G D D+ D F RM R+ SWN+
Sbjct: 120 AYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDEDLLRDFFARMPSRDSVSWNT 179
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+++ V G EA+ +F+EM +S + +PD++T+ SV+SA AYLGA+ HG W H Y+
Sbjct: 180 VLSWCVVNGEYDEAIAVFREMLAS---QECQPDRVTLVSVVSAIAYLGALAHGLWAHAYV 236
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL-AWTAMISVFALNGYGKEA 358
R ++ + + +AL++MY KCG +E A VF + K +L W AM++ F NGY + A
Sbjct: 237 FRKCIEVEEKLSSALINMYSKCGFIEGAVYVFDNVGGKRSLDTWNAMLAGFTANGYSERA 296
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
+ F ME+ + PN +TF +L+AC+H GLVE+G F M Y +EP + HY CM+D
Sbjct: 297 LELFTRMESTRLMPNKITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHYGCMVD 356
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+ RAG+F +AE +I++MPMEPD + ALLG C+ H N+ELG+KV LI+ +HA
Sbjct: 357 LFCRAGMFEKAEEIIQTMPMEPDASMLKALLGACRTHKNLELGKKVGHRLIEAAANDHAG 416
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
YV L ++YA G + V K R LM +RG+ K PG SSVE++GV+HEF K +
Sbjct: 417 YVLLSNIYALDGNWGGVHKVRKLMLDRGVLK-TPGSSSVELNGVIHEFISGDKSHSRKRD 475
Query: 539 LVLILNGLSKIMKNGGF 555
+ +L + + +K+ G+
Sbjct: 476 IYKMLGEICQQLKSSGY 492
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 301/561 (53%), Gaps = 82/561 (14%)
Query: 5 LQMVSYSLLNSPAKVSPPNKESTKLI----LRNAIDECKNMRELKEIHTQIIKSPCLQTN 60
LQ+ S+SL + PN E+T L+ L + I +C ++ELK+I IK+
Sbjct: 6 LQLTSFSL-------TKPNTETTSLLPLPHLISLIPKCTTLKELKQIQAYTIKT---NYQ 55
Query: 61 DHHSLITRLLFFCALS-VSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETND---- 115
++ ++IT+ + FC + S+ +A +F I + ++ +N M R A ND
Sbjct: 56 NNTNVITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGYA----RLNDPLRM 111
Query: 116 -THSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV 174
TH +CL+L ++ L E G ++ VK GV D+++V
Sbjct: 112 ITHFRRCLRLVSKVKA-------------LAE---------GKQLHCFAVKLGVSDNMYV 149
Query: 175 QNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
++I+++ ACG D+D + +F ++ + +
Sbjct: 150 VPTLINMYTACG-------------------------------DIDASRRVFDKIDEPCV 178
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
++N+II + RA EAL LF+E+Q E +KP +T+ VLS+CA LG++D G+W
Sbjct: 179 VAYNAIIMSLARNNRANEALALFRELQ----EIGLKPTDVTMLVVLSSCALLGSLDLGRW 234
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
+H Y+++ G D V + T L+DMY KCG ++ A VF++MPK+DT AW+A+I +A +G
Sbjct: 235 MHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGD 294
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
G +A EM+ E V+P+ +TF+G+L AC+H+GLVE+G F M + Y + P + HY
Sbjct: 295 GFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYG 354
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
CM+D+L RAG EA + I +P++P +W LL C HGNVE+G++V + + +LD
Sbjct: 355 CMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDS 414
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKV 534
+ YV ++ A+ G++DDV R M ++G K +PGCSS+EV+ VVHEF
Sbjct: 415 HGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVK-IPGCSSIEVNNVVHEFFAGEGVHS 473
Query: 535 VKEELVLILNGLSKIMKNGGF 555
L L+ L K +K+ G+
Sbjct: 474 TSTTLHRALDELVKELKSAGY 494
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/499 (35%), Positives = 285/499 (57%), Gaps = 21/499 (4%)
Query: 63 HSLITRLLFFCALSVSGSL----------SYATNVFSHIKRSDLYTYNIMIRANACKSSE 112
H+ + R F C+ VSG+L VF +++ L + ++IRA C
Sbjct: 114 HASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCV--- 170
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDV 172
T K L+L++ M G++PD + ++ C D V +++ + K G+ D
Sbjct: 171 ---TFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDA 227
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
FV +++IS + CG + A F E +++V WN MI + +L++ LF+ M R
Sbjct: 228 FVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDR 287
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
++ SWNS+I GF + G+ +EAL F EM+ S V P+ +T+ S LSACA GA+D G
Sbjct: 288 DVVSWNSMIGGFARIGQYQEALTWFHEMEFSGV----SPNALTLLSTLSACASHGALDTG 343
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
W+H Y+ ++ ++ D + ++L+DMY KCG +++A +F+E ++D WT+++ A++
Sbjct: 344 AWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMH 403
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
G G++A F +M+ V+P+ VT VG+LSACAH+GL+++G W F M V+ + P V H
Sbjct: 404 GRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEH 463
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
Y M+D+L R G EA LI MPME + +WGA L C++H NVELGE A+ L+ L
Sbjct: 464 YGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLX 523
Query: 473 PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSP 532
P + V L +MYA+ ++D R +K++G++K PGCSS+EV+G VH F + +
Sbjct: 524 PRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKS-PGCSSIEVNGSVHGFLVGDNS 582
Query: 533 KVVKEELVLILNGLSKIMK 551
E+ ++ + K+M+
Sbjct: 583 HPCYTEINSMVEKIEKLMR 601
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 180/415 (43%), Gaps = 83/415 (20%)
Query: 89 SHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECT 148
S + ++++ +N MIR T D L Y Q L G+ P+ TF +LLK
Sbjct: 47 SRLDCANVFVWNTMIRKQVENGLITRDPP----LLYYMQGLRAGLRPNGHTFMYLLKALV 102
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+ G V+ VV+ G FV +++ ++ACG V R +FDEM +V W
Sbjct: 103 SGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTL 162
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+I Y+ + AL+LFR M+ E
Sbjct: 163 IIRAYVCVTFPEKALELFRTMR-----------------------------------EVG 187
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
+ PD + +++V+SAC LG + K +H ++ +SG++ D + + L+ YG+CG ++ AY
Sbjct: 188 LTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAY 247
Query: 329 GVFKE-------------------------------MPKKDTLAWTAMISVFALNGYGKE 357
F+E MP +D ++W +MI FA G +E
Sbjct: 248 RFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQE 307
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH----Y 413
A F EME GV PN +T + LSACA G ++ G W H Y+ + +
Sbjct: 308 ALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWI-----HAYVDKNDMNRDGSLD 362
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ +ID+ S+ G +A ++ D+F W +++ G MHG GEK Y
Sbjct: 363 SSLIDMYSKCGDIDKAVQIFEE-STRRDLFTWTSIVCGLAMHGR---GEKALHYF 413
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 273/453 (60%), Gaps = 11/453 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+GSL + F + ++ ++N MI A ++ T + S L++ M G+ D
Sbjct: 158 AGSLGDSRRFFDEMVDRNVVSWNSMINGYA-QAGNTREACS-----LFEGMRRQGLLADE 211
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T LL C+ + G V+ ++ G D+ + N+++ ++ CG + A FD
Sbjct: 212 FTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDM 271
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M ++ VSW +M+ + +D A D F ++ +++I SWN++I+ +VQGGR EAL+L+
Sbjct: 272 MPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLY 331
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
M+ + PD+ T+A+VLSAC LG + GK +H +R + + V + +L+DM
Sbjct: 332 NRMKLLGL----APDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDM 387
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y +CG V+ A +F EMP K+ ++W A+I A++G ++A FR M ++ P+ +TF
Sbjct: 388 YARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITF 447
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V LLSAC H GL+E G++ F MRHVY V+P V HYACM+D+L R G ++A LI+ MP
Sbjct: 448 VALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMP 507
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M PDV VWGALLG C++HG++++G++V + L++L+ ++ +V + +M + +++D+K+
Sbjct: 508 MRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKR 567
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
R LM+E G++K + G SS+E + +HE +G
Sbjct: 568 LRKLMREWGMKKNM-GVSSIETNSNIHESGAEG 599
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 207/460 (45%), Gaps = 79/460 (17%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
+R + C ++ L ++H ++ +D S I L +CAL G + YA +F
Sbjct: 15 VRELLRRCGSVHRLNQLHAHLVVH---GVDDVTSQI--LASYCALPAGGGVWYARQLFDR 69
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
I D + YN +IRA C S + L L + M+ GI P+ T PFLLK C +
Sbjct: 70 IPDPDRFVYNSLIRA-YCNSHCPQEA-----LPLLRGMIRRGILPNEFTLPFLLKACARV 123
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
+G VVK G VFV N+++ + + G + +R FDEM +R+VVSWN+MI
Sbjct: 124 QAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMI 183
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY ++G+ A LF M+++ + +
Sbjct: 184 NGYAQAGNTREACSLFEGMRRQGLLA---------------------------------- 209
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG-------- 322
D+ T+ S+L AC+ G ++ GK VH +L G D+++ ALVDMYGKCG
Sbjct: 210 -DEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTC 268
Query: 323 -----------------------CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
++ A F+++P+K ++W AMIS + G EA
Sbjct: 269 FDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEAL 328
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
D + M+ G+ P+ T +LSAC G + G+ +R + P V + ++D+
Sbjct: 329 DLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALFNSLLDM 387
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+R G A L MP + +V W A++G MHG +
Sbjct: 388 YARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMHGRAQ 426
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 143/324 (44%), Gaps = 31/324 (9%)
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D+++++ + S+ A+ G G + A LF R+ + F +NS+I + +EAL
Sbjct: 41 DDVTSQILASYCALPAG----GGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALP 96
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
L + M + + P++ T+ +L ACA + A +H HG + + G V +G AL+
Sbjct: 97 LLRGM----IRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALL 152
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
Y G + + F EM ++ ++W +MI+ +A G +EA F M +G+ +
Sbjct: 153 HSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEF 212
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL---------SRAGLF 426
T V LL AC+ G +E G+ LV H+ C ID++ + G
Sbjct: 213 TLVSLLFACSAEGNLEFGK----------LVHSHLLVRGCRIDLILANALVDMYGKCGDL 262
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
A MP + + W ++L +++ + + + ++ + + Y
Sbjct: 263 LMAHTCFDMMPFK-NAVSWTSMLCALAKRASIDAARDWFEQIPEKSIIS---WNAMISCY 318
Query: 487 AKAGRFDDVKKTRNLMKERGIRKE 510
+ GRF + N MK G+ +
Sbjct: 319 VQGGRFHEALDLYNRMKLLGLAPD 342
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 250/443 (56%), Gaps = 39/443 (8%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L ++ M I PD TFP +LK + D VG ++G V++ G DV+ +++ L
Sbjct: 74 LYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHL 133
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ C ++ A LFDEM +RN +WN++I
Sbjct: 134 YCTCLSISDASQLFDEMP-------------------------------ERNAVTWNALI 162
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
TG+ + +A++ F+ M + + P + T+ VLSAC++LGA + GKW+H ++
Sbjct: 163 TGYTHNRKFVKAIDAFRGMLADGAQ----PSERTVVVVLSACSHLGAFNQGKWIHEFIYH 218
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
+ L +V +GTAL+DMY KCG V VF+E+ +K+ W +IS +A+NG G A
Sbjct: 219 NRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQA 278
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F M E +P+ VTF+G+L AC H GLV +GRW F+ M+ + ++P + HY CM+D+L
Sbjct: 279 FSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLG 338
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAGL EA LI+SM +EPD +W ALL C++HGN +LGE + + LI+L+P N YV
Sbjct: 339 RAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVL 398
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
L ++Y++ R+ +V K R +M RGIRK VPGCSS+E++ VV+EF K E +
Sbjct: 399 LSNIYSRERRWAEVGKLRGMMNLRGIRK-VPGCSSIEINNVVYEFVASNDRKPEFEAIYK 457
Query: 542 ILNGLSKIMKNGGFGQYIRGLSM 564
L+ L K +K G Y+ G M
Sbjct: 458 QLDNLIKKLKENG---YVTGTDM 477
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 243/392 (61%), Gaps = 16/392 (4%)
Query: 173 FVQNSVISLFMACGFVTSARM------LFDE---MSNRDVVSWNAMIIGYLRSGDLDVAL 223
F + +++S+ ACG + A++ DE + NR++++ A+I Y + G+L A
Sbjct: 218 FDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMT--ALIDMYAKCGELGKAR 275
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
LF M+ R++ +W+++I+G+ Q + REAL LF EMQ + VE P+ +T+ SVLSAC
Sbjct: 276 RLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVE----PNDVTMVSVLSAC 331
Query: 284 AYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWT 343
A LGA++ GKWVH Y+RR L +++GTALVD Y KCGC++ A F+ MP K++ WT
Sbjct: 332 AVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWT 391
Query: 344 AMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV 403
A+I A NG G+EA + F M + P VTF+G+L AC+HS LVE+GR F M
Sbjct: 392 ALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQD 451
Query: 404 YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEK 463
Y ++P HY C++D+L RAGL EA + IR+MP+EP+ +W ALL C +H NVE+GE+
Sbjct: 452 YGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEE 511
Query: 464 VAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVV 523
+ ++ L+P + Y+ L ++YA G++ + R MK+RGI K PGCS +E+DGVV
Sbjct: 512 ALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEK-TPGCSLIELDGVV 570
Query: 524 HEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
EF + S +E+ + + +K G+
Sbjct: 571 VEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGY 602
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 212/454 (46%), Gaps = 62/454 (13%)
Query: 8 VSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH--HSL 65
V + L +PA P + LR + R L ++H +IKS L + HSL
Sbjct: 5 VPTAALPTPAGAGPAPPHAP---LRT------DPRYLPQLHAALIKSGELTGSPKCFHSL 55
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT--YNIMIRANACKSSETNDTHSGKCLK 123
+ A + L YA ++F R L T YN+++RA + H L
Sbjct: 56 LE-----AAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRA------LLHAGHPEDALH 104
Query: 124 LYKQML-CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
L+ +ML + PD T LK C++ VG + VK G+ D FV +S+I ++
Sbjct: 105 LFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMY 164
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
+C V +A++LFD + VV WN+IIT
Sbjct: 165 ASCRDVAAAQLLFDAVEENGVVM-------------------------------WNAIIT 193
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
+++ G E +E+F+ M +E V D+IT+ SV++AC +G GKWV Y+
Sbjct: 194 AYMKNGNWMEVVEMFKGM----LEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEK 249
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
GL + + TAL+DMY KCG + +A +F M +D +AW+AMIS + +EA F
Sbjct: 250 GLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALF 309
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
EM+ V PN VT V +LSACA G +E G+W +R L + A ++D ++
Sbjct: 310 SEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTA-LVDFYAK 368
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
G +A SMP++ + + W AL+ G +G
Sbjct: 369 CGCIDDAVEAFESMPVK-NSWTWTALIKGMATNG 401
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 115/286 (40%), Gaps = 46/286 (16%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A +F ++ D+ ++ MI S T + L L+ +M + P+ +
Sbjct: 269 GELGKARRLFDGMQSRDVVAWSAMI------SGYTQADQCREALALFSEMQLAEVEPNDV 322
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C G V+ + + + + + +++ + CG + A F+ M
Sbjct: 323 TMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESM 382
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
++ +W A+I G +G AL+LF M+K +I
Sbjct: 383 PVKNSWTWTALIKGMATNGRGREALELFSSMRKASI------------------------ 418
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDM 317
+P +T VL AC++ ++ G+ + + G+ +VD+
Sbjct: 419 -----------EPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDL 467
Query: 318 YGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG---YGKEAF 359
G+ G ++ AY + MP + + + W A++S A++ G+EA
Sbjct: 468 LGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEAL 513
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/473 (36%), Positives = 263/473 (55%), Gaps = 48/473 (10%)
Query: 60 NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
+ H +++ + G + A +F I D+ ++N MI A ET +
Sbjct: 136 SSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYA----ETGNYK-- 189
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
K L+L+K+M+ T + PD T ++ C + +G V+ + G ++ + N++I
Sbjct: 190 KALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALI 249
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
L+ CG +++ A +L + +++ SWN+
Sbjct: 250 DLYSKCG-------------------------------EVETACELLEGLSNKDVISWNT 278
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I G+ +EAL LFQEM S P+ +T+ S+L ACA+LGAID G+W+H Y+
Sbjct: 279 LIGGYTHMNLYKEALLLFQEMLRSGE----TPNDVTMLSILPACAHLGAIDIGRWIHVYI 334
Query: 300 RRSGLDCDVVIG-----TALVDMYGKCGCVERAYGVFKEMPKKDTLA-WTAMISVFALNG 353
+ L VV T+L+DMY KCG ++ A V +L+ W AMI FA++G
Sbjct: 335 DKK-LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHG 393
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
AFD F M G+ P+ +TFVGLLSAC+HSG+++ GR F MR Y + P + HY
Sbjct: 394 RANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHY 453
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP 473
CMID+L +GLF EAE +I +MPMEPD +W +LL C++HGN+ELGE A+ LI ++P
Sbjct: 454 GCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEP 513
Query: 474 LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
N YV L ++YA AG++++V K R L+ ++G++K+VPGCSS+E+D VVHEF
Sbjct: 514 ENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEF 566
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 218/403 (54%), Gaps = 24/403 (5%)
Query: 63 HSLITRLLFFCALSVS-GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
H ++LL FC LS L YA +VF I + +NIM R +A S +
Sbjct: 6 HYAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVS------A 59
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
LKLY M+ G+ P+ TFPFLLK C K G ++G V+K G D++V S+IS+
Sbjct: 60 LKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISM 119
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ G + A+ +FD S+RDVVS+ A+I GY G ++ A +F + +++ SWN++I
Sbjct: 120 YAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMI 179
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
+G+ + G ++ALELF+EM ++ VKPD+ T+A+V+SACA G+I+ G+ VH ++
Sbjct: 180 SGYAETGNYKKALELFKEMMKTN----VKPDESTMATVVSACAQSGSIELGRQVHSWIND 235
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
G ++ I AL+D+Y KCG VE A + + + KD ++W +I + KEA
Sbjct: 236 HGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLL 295
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL--------VEPHVYHY 413
F+EM G PN VT + +L ACAH G ++ GRW HVY+ V
Sbjct: 296 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI-----HVYIDKKLKGVVVTNASSLR 350
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ID+ ++ G A ++ S + W A++ G MHG
Sbjct: 351 TSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHG 393
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/519 (33%), Positives = 290/519 (55%), Gaps = 54/519 (10%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +C N+ ELK+IH I+K Q++ L+T+++ C + G YA +F +
Sbjct: 66 LKDCPNIVELKKIHAHIVKFSLSQSS---FLVTKMVDVC--NHYGETEYANLLFKGVADP 120
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-----ISPDCLTFPFLLKECTK 149
+ + YN MIRA + N + + +YKQML I PD TFPF++K C
Sbjct: 121 NAFLYNAMIRA-----YKHNKVYV-LAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAG 174
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+ +G V+G V KFG + V+NS++ +++ C
Sbjct: 175 LMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCD----------------------- 211
Query: 210 IIGYLRSGDLDVALDLFRRMKKRN--IFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
LD A +F M +R+ IFSW +I++G+ + G +ALE F+ MQ +E
Sbjct: 212 --------SLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIE- 262
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
PD+I++ SVL CA LGA++ GKW+H Y ++G ++ + AL++MY KCG +++
Sbjct: 263 ---PDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQG 319
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
+F +M ++D ++W+ MI A +G +EA + F+EM+ + P+ +TFVGLL+ACAH+
Sbjct: 320 RRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHA 379
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GL+ +G F M+ Y +EP V HY C++++L +G +A L++ MP +PD +WG+
Sbjct: 380 GLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGS 439
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
LL C+ HGN+++ ++L++L+P + YV L ++YA G++D V + R LM+ + +
Sbjct: 440 LLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSM 499
Query: 508 RKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
+K PGCSS+EVD +V EF+ K + + +L L
Sbjct: 500 KK-TPGCSSIEVDNMVQEFASGDDSKPFSKAICRVLKLL 537
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 250/443 (56%), Gaps = 39/443 (8%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L ++ M I PD TFP +LK + D VG ++G V++ G DV+ +++ L
Sbjct: 74 LYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHL 133
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ C ++ A LFDEM +RN +WN++I
Sbjct: 134 YCTCLSISDASQLFDEMP-------------------------------ERNAVTWNALI 162
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
TG+ + +A++ F+ M + + P + T+ VLSAC++LGA + GKW+H ++
Sbjct: 163 TGYTHNRKFVKAIDAFRGMLADGAQ----PSERTVVVVLSACSHLGAFNQGKWIHEFIYH 218
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
+ L +V +GTAL+DMY KCG V VF+E+ +K+ W +IS +A+NG G A
Sbjct: 219 NRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQA 278
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F M E +P+ VTF+G+L AC H GLV +GRW F+ M+ + ++P + HY CM+D+L
Sbjct: 279 FSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLG 338
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAGL EA LI+SM +EPD +W ALL C++HGN +LGE + + LI+L+P N YV
Sbjct: 339 RAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVL 398
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
L ++Y++ R+ +V K R +M RGIRK VPGCSS+E++ VV+EF K E +
Sbjct: 399 LSNIYSRERRWAEVGKLRGMMSLRGIRK-VPGCSSIEINNVVYEFVASNDRKPEFEAIYK 457
Query: 542 ILNGLSKIMKNGGFGQYIRGLSM 564
L+ L K +K G Y+ G M
Sbjct: 458 QLDNLIKKLKENG---YVTGTDM 477
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 298/538 (55%), Gaps = 30/538 (5%)
Query: 29 LILRNAIDECKNM---RELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYAT 85
+ + +A+ C N+ R +EIH IK L ++ L+ + S+ A
Sbjct: 363 ITIASAVSACTNLSLLRHGREIHGYCIKVEELDSD----LLVGNSLVDYYAKCRSVEVAR 418
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
F IK++DL ++N M+ A + S + ++L +M GI PD +T+ L+
Sbjct: 419 RKFGMIKQTDLVSWNAMLAGYALRGSHE------EAIELLSEMKFQGIEPDIITWNGLVT 472
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM--------LFDE 197
T+ DG + ++ G+ + ++ ACG V + ++ L +
Sbjct: 473 GFTQYGDGKAALEFFQRMHSMGMDPNT---TTISGALAACGQVRNLKLGKEIHGYVLRNH 529
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ V +A+I Y L+VA +F + R++ WNSII+ Q GR+ AL+L
Sbjct: 530 IELSTGVG-SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLL 588
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+EM S+VE + +T+ S L AC+ L A+ GK +H ++ R GLD I +L+DM
Sbjct: 589 REMNLSNVE----VNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDM 644
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
YG+CG ++++ +F MP++D ++W MISV+ ++G+G +A + F++ G++PNH+TF
Sbjct: 645 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITF 704
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
LLSAC+HSGL+E+G F MM+ Y ++P V YACM+D+LSRAG F+E I MP
Sbjct: 705 TNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP 764
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
EP+ VWG+LLG C++H N +L E A+YL +L+P + YV + ++Y+ AGR++D K
Sbjct: 765 FEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAK 824
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R LMKERG+ K PGCS +EV +H F + + + E++ + L +K G+
Sbjct: 825 IRCLMKERGVTKP-PGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGY 881
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 227/488 (46%), Gaps = 86/488 (17%)
Query: 23 NKESTKLILRNAIDECKNMRELK---EIHTQIIKSPCLQTNDHHSLITRLL-FFCALSVS 78
N + I + + +C+ + L+ ++H Q++ + + L +RLL +C +
Sbjct: 84 NPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNG---VDVCEFLGSRLLEVYCQ---T 137
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F + +++++ ++ C + +T +KL+ M+ G+ PD
Sbjct: 138 GCVEDARRMFDKMSERNVFSWTAIMEM-YCGLGDYEET-----IKLFYLMVNEGVRPDHF 191
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
FP + K C++ + VG VY ++ G + V+ S++ +F+ CG + AR F+E+
Sbjct: 192 VFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 251
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK----KRNIFSWNSIITGFVQGGRAREAL 254
+DV WN M+ GY G+ AL MK K + +WN+II+G+ Q G+ EA
Sbjct: 252 EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEAS 311
Query: 255 ELFQEMQS--------------------------------SSVEEMVKPDKITIASVLSA 282
+ F EM V E VKP+ ITIAS +SA
Sbjct: 312 KYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSA 371
Query: 283 CAYLGAIDHGKWVHGY-LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
C L + HG+ +HGY ++ LD D+++G +LVD Y KC VE A F + + D ++
Sbjct: 372 CTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVS 431
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
W AM++ +AL G +EA + EM+ +G+ P+ +T+ GL+ +G + G
Sbjct: 432 WNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLV-----TGFTQYGD------- 479
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
+A L E + + SM M+P+ L C N++LG
Sbjct: 480 -------------------GKAAL--EFFQRMHSMGMDPNTTTISGALAACGQVRNLKLG 518
Query: 462 EKVAQYLI 469
+++ Y++
Sbjct: 519 KEIHGYVL 526
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 197/441 (44%), Gaps = 57/441 (12%)
Query: 134 SPD-CL-TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
+PD C+ + +L++C K + +G V+ Q+V GV F+ + ++ ++ G V A
Sbjct: 84 NPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA 143
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R +FD +M +RN+FSW +I+ + G
Sbjct: 144 RRMFD-------------------------------KMSERNVFSWTAIMEMYCGLGDYE 172
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
E ++LF M V E V+PD V AC+ L GK V+ Y+ G + + +
Sbjct: 173 ETIKLFYLM----VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK 228
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
+++DM+ KCG ++ A F+E+ KD W M+S + G K+A +M+ GV+
Sbjct: 229 GSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVK 288
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ VT+ ++S A SG E+ F+ M + +P+V + +I + G EA
Sbjct: 289 PDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALS 348
Query: 432 LIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV--NLCDMY 486
+ R M +E P+ + + C + G ++ Y I ++ L+ V +L D Y
Sbjct: 349 VFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYY 408
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELV-LILNG 545
AK + ++ ++K+ + V + ++ ++++GS + E L + G
Sbjct: 409 AKCRSVEVARRKFGMIKQTDL---------VSWNAMLAGYALRGSHEEAIELLSEMKFQG 459
Query: 546 LSK--IMKNG---GFGQYIRG 561
+ I NG GF QY G
Sbjct: 460 IEPDIITWNGLVTGFTQYGDG 480
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 7/261 (2%)
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDK-ITI-ASVLSACAYLGAIDHGKWVHGY 298
ITGF GG L S ++ PD+ I I AS+L C L + G VH
Sbjct: 55 ITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQ 114
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
L +G+D +G+ L+++Y + GCVE A +F +M +++ +WTA++ ++ G +E
Sbjct: 115 LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEET 174
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F M EGVRP+H F + AC+ G+ + M + E + ++D
Sbjct: 175 IKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGF-EGNSCVKGSILD 233
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ--YLIDLDPLNH 476
+ + G A R + + DVF+W ++ G G + K L + P +
Sbjct: 234 MFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP-DQ 291
Query: 477 AFYVNLCDMYAKAGRFDDVKK 497
+ + YA++G+F++ K
Sbjct: 292 VTWNAIISGYAQSGQFEEASK 312
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/438 (38%), Positives = 260/438 (59%), Gaps = 9/438 (2%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L ++ +M G+ P+ +T +L C++ D G +++G V+ G+ ++VFV ++++SL
Sbjct: 218 LAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSL 277
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI----FSW 237
+ C V AR++FD M +RDVVSWN ++ Y + + D L LF +M + + +W
Sbjct: 278 YARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATW 337
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N++I G ++ G+ +A+E+ ++MQ+ KP++ITI+S L AC+ L ++ GK VH
Sbjct: 338 NAVIGGCMENGQTEKAVEMLRKMQNLGF----KPNQITISSFLPACSILESLRMGKEVHC 393
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
Y+ R L D+ TALV MY KCG + + VF + +KD +AW MI A++G G+E
Sbjct: 394 YVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGRE 453
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
F M G++PN VTF G+LS C+HS LVE+G F M +LVEP HYACM+
Sbjct: 454 VLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMV 513
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+ SRAG EA I+ MPMEP WGALLG C+++ NVEL + A L +++P N
Sbjct: 514 DVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPG 573
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKE 537
YV+L ++ A + + + R LMKERGI K PGCS ++V VH F + + +
Sbjct: 574 NYVSLFNILVTAKLWSEASEARILMKERGITK-TPGCSWLQVGDRVHTFVVGDKNNMESD 632
Query: 538 ELVLILNGLSKIMKNGGF 555
++ L+ L + MK+ G+
Sbjct: 633 KIYNFLDELGEKMKSAGY 650
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 203/477 (42%), Gaps = 91/477 (19%)
Query: 54 SPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSET 113
+P + TN L RLL AL+V G A +F +I + D T + +I S+ T
Sbjct: 57 APSVPTNIPSHLGLRLLK-AALNV-GDFRRAQQLFDNIPQPDPTTCSTLI------SAFT 108
Query: 114 NDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF 173
+ ++LY + GI P F + K C D V+ ++ G+ D F
Sbjct: 109 TRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAF 168
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRN 233
+ N++I + C V AR +FD++ +DVVSW +M Y+ G + L +F M
Sbjct: 169 LGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEM---- 224
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
WN VKP+ +T++S+L AC+ L + G+
Sbjct: 225 --GWNG-----------------------------VKPNSVTLSSILPACSELKDLKSGR 253
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG 353
+HG+ R G+ +V + +ALV +Y +C V++A VF MP +D ++W +++ + N
Sbjct: 254 AIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNR 313
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
+ F +M ++GV + T+ ++ C +G EK
Sbjct: 314 EYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKA-------------------- 353
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI---- 469
E R ++++ +P+ + L C + ++ +G++V Y+
Sbjct: 354 -------------VEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWL 400
Query: 470 --DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
DL + Y MYAK G D+ +RN+ + RK+V +++ + +H
Sbjct: 401 IGDLTTMTALVY-----MYAKCG---DLNLSRNVF-DMICRKDVVAWNTMIIANAMH 448
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 37/229 (16%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
K +++ ++M G P+ +T L C+ +G V+ V + + D+ +++
Sbjct: 352 KAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALV 411
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
++ CG + +R +FD + +DVV+WN MII G+
Sbjct: 412 YMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGN--------------------- 450
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
RE L LF+ M S +KP+ +T VLS C++ ++ G + +
Sbjct: 451 ----------GREVLLLFESMLQSG----IKPNSVTFTGVLSGCSHSRLVEEGLQIFNSM 496
Query: 300 RRSGL-DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL-AWTAMI 346
R L + D +VD++ + G + AY + MP + T AW A++
Sbjct: 497 GRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALL 545
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 19/114 (16%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL----SVSGSLSYATNVFSHIKRS 94
+++R KE+H + + H LI L AL + G L+ + NVF I R
Sbjct: 383 ESLRMGKEVHCYVFR---------HWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRK 433
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECT 148
D+ +N MI ANA + + L L++ ML +GI P+ +TF +L C+
Sbjct: 434 DVVAWNTMIIANAMHG------NGREVLLLFESMLQSGIKPNSVTFTGVLSGCS 481
>gi|297810935|ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319188|gb|EFH49610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1281
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/458 (36%), Positives = 270/458 (58%), Gaps = 13/458 (2%)
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
+ A+ + ++YA + S + Y +N +IR +N + K +++Y Q+L
Sbjct: 794 YLLAVDATSDVNYAYKLLSKLSNPPDYGWNFVIRGF------SNSKNPEKSIRVYIQILR 847
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
+G SPD +T+PFLLK ++ + +G S++ VVK G+ D+F+ N++I ++ + S
Sbjct: 848 SGFSPDHMTYPFLLKSSSRLSNREIGGSLHCSVVKTGLEWDLFISNTLIHMYGSFRDKAS 907
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
AR LFDEM +++V+WN+++ Y +SGD+ A +F M R++ +W+S+I G+V+ G
Sbjct: 908 ARKLFDEMPYKNLVTWNSILDSYAKSGDVVSARLVFDEMTMRDVVTWSSMIDGYVKSGEY 967
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
EALE+F +M K +++T+ SVL ACA+LG ++ GK VH Y+ L V++
Sbjct: 968 NEALEIFDQMMRMGSS---KANEVTMVSVLCACAHLGELNRGKVVHRYILDVHLPLTVIL 1024
Query: 311 GTALVDMYGKCGCVERAYGVF--KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
T+L+DMY KCG + A+GVF + K D L W AMI A +G+ +E+ F +M
Sbjct: 1025 QTSLIDMYAKCGSIGDAWGVFCGASVKKTDALMWNAMIGGLASHGFIRESLLLFHKMRES 1084
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
+ P+ +TF+ LL+AC+H GLV++ W F EP HYACM+D+LSRAGL +
Sbjct: 1085 EIDPDEITFLCLLAACSHGGLVKEA-WHFFTSLKESGAEPKSEHYACMVDVLSRAGLVKD 1143
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A I M ++P V GAL GC HGN+EL E V + LI+L P N YV L ++YA
Sbjct: 1144 AHDFISEMLIKPTGSVLGALFNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAI 1203
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+F + R M+++G++K + G S ++++G H F
Sbjct: 1204 NKQFGAARSMREAMEKKGVKK-IAGHSIIKLNGTSHRF 1240
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 179/466 (38%), Gaps = 92/466 (19%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L+L++ G PD + + L+K K +++ ++V G+ V NS+I
Sbjct: 599 LELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLFNEMVSKGLKPSVATYNSMIDG 658
Query: 182 FMACGFVTSA-----RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF- 235
+ G + RM DE N DV+++ ++I G S A+ + MK ++ +
Sbjct: 659 WCKEGEIDRGLSCIVRMYEDE-KNPDVITYTSLIHGLCASRRPSEAISRWNEMKGKDCYP 717
Query: 236 ---SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
++ ++I G G + EAL F+EM+ E+ ++PD S++S+ I G
Sbjct: 718 NRITFMALIQGLCNCGWSSEALVYFREME----EKEMEPDSAVYLSLVSSFLSSENISAG 773
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+ + G V + + V AY + ++ W +I F+ +
Sbjct: 774 FGIFREMVHKG-RFPVSVDRNYLLAVDATSDVNYAYKLLSKLSNPPDYGWNFVIRGFSNS 832
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA-----------HSGLVEKG-RWCFVM- 399
+++ + ++ G P+H+T+ LL + + H +V+ G W +
Sbjct: 833 KNPEKSIRVYIQILRSGFSPDHMTYPFLLKSSSRLSNREIGGSLHCSVVKTGLEWDLFIS 892
Query: 400 --MRHVY---------------LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
+ H+Y + ++ + ++D +++G A + M M DV
Sbjct: 893 NTLIHMYGSFRDKASARKLFDEMPYKNLVTWNSILDSYAKSGDVVSARLVFDEMTMR-DV 951
Query: 443 FVWGALLGG------------------------------------CQMHGNVELGEKVAQ 466
W +++ G C G + G+ V +
Sbjct: 952 VTWSSMIDGYVKSGEYNEALEIFDQMMRMGSSKANEVTMVSVLCACAHLGELNRGKVVHR 1011
Query: 467 YLIDLD-PLNHAFYVNLCDMYAKAGRFDD---------VKKTRNLM 502
Y++D+ PL +L DMYAK G D VKKT LM
Sbjct: 1012 YILDVHLPLTVILQTSLIDMYAKCGSIGDAWGVFCGASVKKTDALM 1057
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 114/301 (37%), Gaps = 49/301 (16%)
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
L YN +I CK + ++ LKL +M G+ P T + +R D
Sbjct: 474 LMMYNNIIEG-MCKEGRSEES-----LKLLAEMKDAGVEPSQYTLNCIYGCLAERCDFAG 527
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN----RDVVSWNAMII 211
+ ++ +G + ++ G A D+++ R +VS+ A I
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTCLVKKLCENGKAVDACKYIDDVAGEGFLRHMVSYTAAIE 587
Query: 212 GYLRSGDLDVALDLFRRMKKR----NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
G +R+ +D L+LFR ++ +++ +I + R EA LF EM V +
Sbjct: 588 GLIRNEGVDRGLELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLFNEM----VSK 643
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
+KP T S++ G ID G C+ R
Sbjct: 644 GLKPSVATYNSMIDGWCKEGEIDRG----------------------------LSCIVRM 675
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
Y ++ D + +T++I + EA + EM+ + PN +TF+ L+ +
Sbjct: 676 Y---EDEKNPDVITYTSLIHGLCASRRPSEAISRWNEMKGKDCYPNRITFMALIQGLCNC 732
Query: 388 G 388
G
Sbjct: 733 G 733
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 97/240 (40%), Gaps = 60/240 (25%)
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA----CAYLGAID-- 290
+N+II G + GR+ E+L+L EM+ + VE P + T+ + C + GA+D
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLAEMKDAGVE----PSQYTLNCIYGCLAERCDFAGALDLL 532
Query: 291 ------------------------HGKWV-----------HGYLRRSGLDCDVVIGTALV 315
+GK V G+LR +V TA +
Sbjct: 533 KKMRFYGFEPWIKHTTCLVKKLCENGKAVDACKYIDDVAGEGFLRH------MVSYTAAI 586
Query: 316 DMYGKCGCVERAYGVFKEMPKK----DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
+ + V+R +F++ D +A+ +I EA + F EM ++G++
Sbjct: 587 EGLIRNEGVDRGLELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLFNEMVSKGLK 646
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE--PHVYHYACMIDILSRAGLFSEA 429
P+ T+ ++ G +++G C V M Y E P V Y +I L + SEA
Sbjct: 647 PSVATYNSMIDGWCKEGEIDRGLSCIVRM---YEDEKNPDVITYTSLIHGLCASRRPSEA 703
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
D T ++ V+ NG + A F E+ + G H++ + ++S C G V+K
Sbjct: 213 DKFTLTPVLQVYCNNGKSERALSVFNEILSRGWLDEHISTILVVSFCKW-GQVDKAFELI 271
Query: 398 VMM--RHVYLVEPHVYHYACMIDILSRAGLFSEAERL---IRSMPMEPDVFVWGALLGGC 452
M+ RH+ L + + +I + +A +L +R M M PD+ ++ L+GG
Sbjct: 272 EMLEERHIRL---NYKTFCVLIHGFVKESRIDKAFQLFEKMRRMGMNPDIALYDVLIGGL 328
Query: 453 QMHGNVELG 461
H ++E+
Sbjct: 329 CKHKDLEMA 337
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 9/180 (5%)
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK---DTLAWTAMISVFALNGYG 355
+R G D T ++ +Y G ERA VF E+ + D T ++ F G
Sbjct: 205 MRDCGFHFDKFTLTPVLQVYCNNGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQV 264
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+AF+ +E +R N+ TF L+ ++K F MR + + P + Y
Sbjct: 265 DKAFELIEMLEERHIRLNYKTFCVLIHGFVKESRIDKAFQLFEKMRRMGM-NPDIALYDV 323
Query: 416 MIDILSRAGLFSEAERL---IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
+I L + A L I+ + PD + G LL C EL + D+D
Sbjct: 324 LIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLL--CSFSEESELSRITKVIIGDID 381
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/517 (33%), Positives = 286/517 (55%), Gaps = 52/517 (10%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS------YATNVFSHIKR 93
N++ LK+IH +I + N++ + + L+ + S+ G + YA +F+ I +
Sbjct: 14 NLKTLKQIHALMIIN---GFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQ 70
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
D + YN+MIR + + + + + LY +M + D TFPF+LK CT+
Sbjct: 71 PDTFMYNVMIRGS------SQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWV 124
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G++V+G V++ G + V+N+++ CG + A LFD+ DVV+W+++I GY
Sbjct: 125 NTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGY 184
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR------------------------ 249
R GDL VA LF M +R++ SWN +ITG+V+ G
Sbjct: 185 ARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIA 244
Query: 250 -------AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
+++ALELF EM + V PD++T+ S+LSACA LG +++GK VH +
Sbjct: 245 GYVVCGLSKQALELFNEMCRAG----VFPDEVTLLSLLSACADLGDLENGKKVHAKVMEI 300
Query: 303 GL-DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
+ ++G AL+DMY KCG ++ + VF + KD ++W ++I AL+G+GKE+
Sbjct: 301 SMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSL 360
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F+ M+ + PN +TFVG+L AC+H+G +++G F +M Y +EP++ H CM+D+L
Sbjct: 361 FKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLG 420
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAGL EA + I SM +EP+ +W LL C++HG+VEL + + L + + YV
Sbjct: 421 RAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVL 480
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
+ ++YA G +D +K R LM + G+ K + G S VE
Sbjct: 481 MSNLYASRGEWDGAEKVRKLMDDSGVTK-IRGSSFVE 516
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 203/535 (37%), Positives = 286/535 (53%), Gaps = 68/535 (12%)
Query: 36 DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS---YATNVFSHIK 92
+ C +M +LK++H L+T T L+ L +S S S YA VF I+
Sbjct: 56 ETCSDMSQLKQLHAFT-----LRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRL 151
+ +N +IRA A S + LY++ML G SPD TFPF+LK C
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEA-----FMLYRKMLERGESSPDKHTFPFVLKACAYIF 165
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
G V+ Q+VK G DV+V N +I L+ +CG
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC------------------------ 201
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
LD+A +F M +R++ SWNS+I V+ G AL+LF+EMQ S +P
Sbjct: 202 -------LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-----FEP 249
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYL-RRSGLDC--DVVIGTALVDMYGKCGCVERAY 328
D T+ SVLSACA LG++ G W H +L R+ +D DV++ +L++MY KCG + A
Sbjct: 250 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 309
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM--EAEGVRPNHVTFVGLLSACAH 386
VF+ M K+D +W AMI FA +G +EA + F M + E VRPN VTFVGLL AC H
Sbjct: 310 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNH 369
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
G V KGR F MM Y +EP + HY C++D+++RAG +EA ++ SMPM+PD +W
Sbjct: 370 RGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 429
Query: 447 ALLGGCQMHG-NVELGEKVAQYLIDLDPLNHA-------FYVNLCDMYAKAGRFDDVKKT 498
+LL C G +VEL E++A+ +I N + YV L +YA A R++DV
Sbjct: 430 SLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIV 489
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF----SMKGSPKVVKEELVLILNGLSKI 549
R LM E GIRKE PGCSS+E++G+ HEF + K + ++L +I + L I
Sbjct: 490 RKLMSEHGIRKE-PGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSI 543
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 137/350 (39%), Gaps = 65/350 (18%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
S P+K + +L+ A E K++H QI+K ++ + L C G
Sbjct: 147 SSPDKHTFPFVLK-ACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC-----G 200
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
L A VF + L ++N MI A + E + L+L+++M PD T
Sbjct: 201 CLDLARKVFDEMPERSLVSWNSMIDA-LVRFGEYDSA-----LQLFREMQ-RSFEPDGYT 253
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCD-----DVFVQNSVISLFMACGFVTSARML 194
+L C G + + CD DV V+NS+I ++ CG + A +
Sbjct: 254 MQSVLSACAGL--GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 311
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F M RD+ SWNAMI+G+ G + A++ F RM +
Sbjct: 312 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK---------------------- 349
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
E V+P+ +T +L AC + G ++ G+ + R D I AL
Sbjct: 350 -----------RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-----DYCIEPAL 393
Query: 315 ------VDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKE 357
VD+ + G + A + MP K D + W +++ G E
Sbjct: 394 EHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/431 (36%), Positives = 269/431 (62%), Gaps = 10/431 (2%)
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQV--VKFGVCDDVFVQNSVISLFMAC 185
ML G++PD + L C+K + +G ++ V + + D++ V ++I ++ C
Sbjct: 228 MLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVV--ALIDMYAKC 285
Query: 186 GFVTSARMLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
G + A+ +FD + + WNA+I GY + G +DVA LF +M R++ ++NS+ITG+
Sbjct: 286 GDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGY 345
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
+ GR R+AL+LF +M+ + + D T+ S+L+ACA LGA+ HG+ +H + + +
Sbjct: 346 IHSGRLRDALQLFMQMRRHGM----RADNFTVVSLLTACASLGALPHGRALHASIEQRIV 401
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
+ DV +GTAL+DMY KCG V+ A VF M ++D WTAMI+ A NG GK+A ++F +
Sbjct: 402 EEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQ 461
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
M+ +G +P VT++ +L+AC+HS L+++GR F MR ++ + P V HY CMID+L+R+G
Sbjct: 462 MKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSG 521
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
L EA L+++MPM+P+ +WG++L C++H N++L A++L+ L P A YV L +
Sbjct: 522 LLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYN 581
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
+Y + ++ D K+ R LM+ERG++K G SS+ V G VH+F E++ ++
Sbjct: 582 IYIDSRQWADAKRVRMLMEERGVKKTA-GYSSITVAGQVHKFVANDQSHPWTLEIMAMME 640
Query: 545 GLSKIMKNGGF 555
++ +K+ G+
Sbjct: 641 EIACRLKSVGY 651
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 185/420 (44%), Gaps = 52/420 (12%)
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS 134
+S L Y ++F + S + ++ +RA C + H + L ++M G+
Sbjct: 45 ISAPRHLRYVLSLFDRLPHSTTFLFDTALRA--CLQASAGADHP---VLLLRRMRSGGVR 99
Query: 135 PDCLTFPFLLKECTKR------LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFV 188
TF F+ + C L ++ A+ ++ V N +I ++ + G
Sbjct: 100 TGAFTFHFVFRCCAAGARARAGLCLMLHAACLRTMLPSAA---PLVANPLIHMYASMGLT 156
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
AR FDE+ +D V W +I G +R G LD A L + +RN+ SW S+I G+ + G
Sbjct: 157 DDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAG 216
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
R +A+ F M S V PD++ + LSAC+ L +D G+ +H + + +
Sbjct: 217 RPADAVYCFNCMLSDG----VAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTD 272
Query: 309 VIGTALVDMYGKCGCVERAYGV--------------------------------FKEMPK 336
+ AL+DMY KCG + +A V F +M
Sbjct: 273 NLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGA 332
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
+D + + +MI+ + +G ++A F +M G+R ++ T V LL+ACA G + GR
Sbjct: 333 RDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRAL 392
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ +VE VY ++D+ + G EA + M E DV W A++ G +G
Sbjct: 393 HASIEQ-RIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMG-ERDVHTWTAMIAGLAFNG 450
>gi|357120906|ref|XP_003562165.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Brachypodium distachyon]
Length = 529
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 277/499 (55%), Gaps = 25/499 (5%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+C M L+++H ++KS + S R++ F A ++YA + H R +
Sbjct: 45 QCATMARLRQLHGALVKSGLAKDPIAAS---RVVAFLA-GKGRDVAYAARLVRHHPRPNA 100
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE----CTKRLD 152
+ +N IRA ++ + L+ ML + P+ TFP L + D
Sbjct: 101 FMWNTAIRA------LSDGPGPDAAVALFLDMLRSPTPPERRTFPSLFASYARLGVRADD 154
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR-DVVSWNAMII 211
GA+++G V+K G+ D +V+NS+I+++ + G A +L+ + DVV+ N+ I+
Sbjct: 155 DGAGAALHGMVLKLGLAGDAYVRNSMIAMYASWGRADEALLLYGQCGQAFDVVACNSAIV 214
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
R+G +D A ++F M R + +W+++++ + + R ++A+ELF MQ+S VE P
Sbjct: 215 ALTRAGRVDEAREVFDAMPARTVATWSAMVSAYSRAARCQDAVELFSAMQASGVE----P 270
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
+ + SVL CA LGA++ G WVH Y+ + G+ + ++ TALVDMY KCG + +A VF
Sbjct: 271 NANVLVSVLGCCAALGALEQGAWVHAYIDKHGVAMNALVVTALVDMYCKCGSIHKARHVF 330
Query: 332 KEMPKKDTLA----WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
+ + LA W AM+ A++G +EA F E+E G+ P++VTF+ +L A HS
Sbjct: 331 -DASRSQGLAKLSSWNAMMLGLAVHGQCQEALALFSELETYGLSPDNVTFITILMAYGHS 389
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
G+ ++ + F M Y V P + HY C++D L+RAG EAE +IR+MPM PD +WGA
Sbjct: 390 GMADEAKALFSAMEREYAVTPGIEHYGCLVDALARAGRLGEAEDVIRTMPMRPDTAIWGA 449
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
LL GC++HG+ E G + A ++ DP + YV + A+ G R M+ G+
Sbjct: 450 LLSGCRLHGDAEAGARAASGAMECDPQDSGAYVLAASVLARDGEVGAGVSVRERMRVEGV 509
Query: 508 RKEVPGCSSVEVDGVVHEF 526
K VPGCS +EV+GVVHEF
Sbjct: 510 AK-VPGCSMIEVNGVVHEF 527
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 203/536 (37%), Positives = 287/536 (53%), Gaps = 68/536 (12%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS---YATNVFSHI 91
+ C +M +LK++H + L+T T L+ L +S S S YA VF I
Sbjct: 32 LQTCSDMSQLKQLH-----AFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 86
Query: 92 KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKR 150
+ + +N +IRA A S + LY++ML G SPD TFPF+LK C
Sbjct: 87 ENHSSFMWNTLIRACAHDVSRKEEA-----FMLYRKMLERGESSPDKHTFPFVLKACAYI 141
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
G V+ Q+VK G DV+V N +I L+ +CG
Sbjct: 142 FGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC----------------------- 178
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
LD+A +F M +R++ SWNS+I V+ G AL+LF+EMQ S +
Sbjct: 179 --------LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-----FE 225
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYL-RRSGLDC--DVVIGTALVDMYGKCGCVERA 327
PD T+ SVLSACA LG++ G W H +L R+ +D DV++ +L++MY KCG + A
Sbjct: 226 PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMA 285
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM--EAEGVRPNHVTFVGLLSACA 385
VF+ M K+D +W AMI FA +G +EA + F M + E VRPN VTFVGLL AC
Sbjct: 286 EQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACN 345
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
H G V KGR F MM Y +EP + HY C++D+++RAG +EA ++ SMPM+PD +W
Sbjct: 346 HRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIW 405
Query: 446 GALLGGCQMHG-NVELGEKVAQYLIDLDPLNHA-------FYVNLCDMYAKAGRFDDVKK 497
+LL C G +VEL E++A+ +I N + YV L +YA A R++DV
Sbjct: 406 RSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGI 465
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEF----SMKGSPKVVKEELVLILNGLSKI 549
R LM E GIRKE PGCSS+E++G+ HEF + K + ++L +I + L I
Sbjct: 466 VRKLMSEHGIRKE-PGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSI 520
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 137/350 (39%), Gaps = 65/350 (18%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
S P+K + +L+ A E K++H QI+K ++ + L C G
Sbjct: 124 SSPDKHTFPFVLK-ACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC-----G 177
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
L A VF + L ++N MI A + E + L+L+++M PD T
Sbjct: 178 CLDLARKVFDEMPERSLVSWNSMIDA-LVRFGEYDSA-----LQLFREMQ-RSFEPDGYT 230
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCD-----DVFVQNSVISLFMACGFVTSARML 194
+L C G + + CD DV V+NS+I ++ CG + A +
Sbjct: 231 MQSVLSACAGL--GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 288
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F M RD+ SWNAMI+G+ G + A++ F RM +
Sbjct: 289 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK---------------------- 326
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
E V+P+ +T +L AC + G ++ G+ + R D I AL
Sbjct: 327 -----------RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-----DYCIEPAL 370
Query: 315 ------VDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKE 357
VD+ + G + A + MP K D + W +++ G E
Sbjct: 371 EHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 420
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 265/466 (56%), Gaps = 21/466 (4%)
Query: 63 HSLITRLLFFCALSVSGSLSY----------ATNVFSHIKRSDLYTYNIMIRANACKSSE 112
HS + +L F + VS SL + A ++F + D+ ++N +I
Sbjct: 433 HSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLI------GGY 486
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDV 172
+ + L L++ M + D +T ++ CT D + + + + + DV
Sbjct: 487 SQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDV 546
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
++ N++I + G + SA +F +M +++ V+ NAMI Y + G+L A +F ++ +
Sbjct: 547 YLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNK 606
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
++ SW+S+I + Q ++LELF++MQ + V KPD + IASVLSACA+LGA+D G
Sbjct: 607 DLISWSSMICAYSQASHFSDSLELFRQMQRAKV----KPDAVVIASVLSACAHLGALDLG 662
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
KW+H Y+RR+ + D ++ +L+DM+ KCGC++ A VF EM +KDTL+W ++I A N
Sbjct: 663 KWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANN 722
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
G+ EA + F M EG RPN VTF+G+L ACA+ LV++G F M+ V+ +EP + H
Sbjct: 723 GFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKH 782
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
Y C++ ILSRAG +A+ I MP+ PD VW LLG C+ HGNV + E + L +LD
Sbjct: 783 YGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVATKKLSELD 842
Query: 473 PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
P N Y+ L ++YA A R+ D R M + +RK P CS V+
Sbjct: 843 PSNSGDYMLLSNIYASADRWSDALNVRQWMADTAVRKS-PACSVVD 887
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 207/345 (60%), Gaps = 10/345 (2%)
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M ++VVSWN +I G+ G+++ A LF +M RN+ SW +I G+ + EA+ LF
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+ M + + P +IT+ +V+ A + LG I G+ +HGY + G+ D +G +L+D+
Sbjct: 61 RHMMAGGI----SPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDL 116
Query: 318 YGKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
Y K G V+ + VF EM +++ ++WT++IS FA++G EA + F EM G+RPN +T
Sbjct: 117 YAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRIT 176
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
F+ +++AC+H GLVE+G F M + Y ++P + H+ C+ID+L RAG EAE++I +
Sbjct: 177 FLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGL 236
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
P+E +V VW LLG C +G VE+G++ + + DL+ + + L ++ + GRF D +
Sbjct: 237 PVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAE 296
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
+ R L+ ER I K VPG + V V F M + K + LV+
Sbjct: 297 QARKLLDERKIVK-VPGLALV----VTRSFVMMEAVKKLHAHLVV 336
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 212/447 (47%), Gaps = 78/447 (17%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M +K++H ++ S ++ +++++ AL S L +A VF I+ + +N
Sbjct: 324 MEAVKKLHAHLVVSGL---HNCQYAMSKVIRSYALQQS-DLVFAHKVFEQIESPTTFLWN 379
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
++R A +S D + YK+ G+ PD +TFPF+LK C K G ++
Sbjct: 380 TLLRGLA-QSDAPKDA-----IVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMH 433
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
V+K G D+FV NS+I L+ ACG + AR +FDEM +DVVSWN++I GY
Sbjct: 434 SHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGY------- 486
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
+RN R +E L LF+ MQ+ E V+ DK+T+ V+
Sbjct: 487 ---------SQRN---------------RFKEVLALFELMQA----EEVQADKVTMVKVI 518
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM------ 334
SAC +LG + Y+ R+ ++ DV +G L+D Y + G ++ A VF +M
Sbjct: 519 SACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTV 578
Query: 335 -------------------------PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
P KD ++W++MI ++ + ++ + FR+M+
Sbjct: 579 TLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAK 638
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
V+P+ V +LSACAH G ++ G+W +R + + + +ID+ ++ G EA
Sbjct: 639 VKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIMENS-LIDMFAKCGCMQEA 697
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHG 456
++ M E D W +++ G +G
Sbjct: 698 LQVFTEME-EKDTLSWNSIILGLANNG 723
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 148/308 (48%), Gaps = 17/308 (5%)
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
L+ DL A +F +++ F WN+++ G Q ++A+ +++ Q E+ +KPD
Sbjct: 355 LQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQ----EKGMKPDN 410
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+T VL ACA A G+ +H ++ + G D+ + +L+ +Y CG + A +F E
Sbjct: 411 MTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDE 470
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M KD ++W ++I ++ KE F M+AE V+ + VT V ++SAC H G
Sbjct: 471 MLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTH-----LG 525
Query: 394 RWCFV--MMRHVYL--VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
W M+R++ +E VY +ID R G AE++ M + + A++
Sbjct: 526 DWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMK-DKNTVTLNAMI 584
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
GN+ +K+ + + D ++ + ++ Y++A F D + M+ ++
Sbjct: 585 HAYAKGGNLVSAKKIFDQIPNKDLIS---WSSMICAYSQASHFSDSLELFRQMQRAKVKP 641
Query: 510 EVPGCSSV 517
+ +SV
Sbjct: 642 DAVVIASV 649
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 168/408 (41%), Gaps = 78/408 (19%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRA--NACKSSETNDTHSGKCLKLYKQMLCTGISPD 136
G + YA +F + ++ ++ +I AC +E + L++ M+ GISP
Sbjct: 20 GEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEA--------VALFRHMMAGGISPS 71
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
+T ++ + L+G ++G VK G+ D V NS+I L+ G V ++ +FD
Sbjct: 72 EITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFD 131
Query: 197 EM-SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
EM R++VSW ++I G+ G AL+LF M++ I
Sbjct: 132 EMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGI--------------------- 170
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTAL 314
+P++IT SV++AC++ G ++ G + + +D ++ +
Sbjct: 171 --------------RPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCI 216
Query: 315 VDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG---YGKEAFDTFREMEAE-- 368
+DM G+ G + A + + +P + + + W ++ + G GK A ++E E
Sbjct: 217 IDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESG 276
Query: 369 ---GVRPNHVTFVGLLSACAHS-------------GLVEKGRWCFVMMR-----HVYLVE 407
V N + +G S + GL FVMM H +LV
Sbjct: 277 GDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVPGLALVVTRSFVMMEAVKKLHAHLVV 336
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPME----PDVFVWGALLGG 451
+++ + + R+ +++ + E P F+W LL G
Sbjct: 337 SGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRG 384
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 271/477 (56%), Gaps = 42/477 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G +S A +F + ++ T+ ++I A L+L ++M ++P+ +
Sbjct: 246 GDISKAQVIFDKLPEKNVVTWTLLIAGYA------QQGQVDVALELLEKMQQAEVAPNKI 299
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T+ +L+ CT L G V+ +++ G +++V N++I+++ CG + AR LF ++
Sbjct: 300 TYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDL 359
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+RDVV+W AM+ GY + G D A+DLFRRM+++ I
Sbjct: 360 PHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGI------------------------ 395
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
KPDK+T S L++C+ + GK +H L +G DV + +ALV MY
Sbjct: 396 -----------KPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMY 444
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG ++ A VF +M +++ +AWTAMI+ A +G +EA + F +M+ +G++P+ VTF
Sbjct: 445 AKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFT 504
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+LSAC H GLVE+GR F M Y ++P V HY+C +D+L RAG EAE +I +MP
Sbjct: 505 SVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPF 564
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+P VWGALL C++H +VE GE+ A+ ++ LDP + YV L ++YA AGR++D +K
Sbjct: 565 QPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKV 624
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R +M++R + KE PG S +EVDG VH F ++ +E+ L L++ +K G+
Sbjct: 625 RQVMEKRDVVKE-PGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGY 680
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 203/435 (46%), Gaps = 74/435 (17%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L + M+ G F LL+EC + G V+ ++K G+ + +++N+++
Sbjct: 79 EALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 138
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK----KRNIF 235
S++ CG +T AR +FD + +R++VSW AMI ++ A + MK K +
Sbjct: 139 SMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKV 198
Query: 236 SWNSIITGF-----VQGGR------AREALELFQEMQSSSVEEMVK-------------- 270
++ S++ F +Q G+ A+ LEL + +S V K
Sbjct: 199 TFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKL 258
Query: 271 PDK-------------------------------------ITIASVLSACAYLGAIDHGK 293
P+K IT S+L C A++HGK
Sbjct: 259 PEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGK 318
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG 353
VH Y+ +SG ++ + AL+ MY KCG ++ A +F ++P +D + WTAM++ +A G
Sbjct: 319 KVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLG 378
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV-YLVEPHVYH 412
+ EA D FR M+ +G++P+ +TF L++C+ +++G+ + H Y ++ VY
Sbjct: 379 FHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLD--VYL 436
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN----VELGEKVAQYL 468
+ ++ + ++ G +A RL+ + E +V W A++ GC HG +E E++ +
Sbjct: 437 QSALVSMYAKCGSMDDA-RLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQG 495
Query: 469 IDLDPLNHAFYVNLC 483
I D + ++ C
Sbjct: 496 IKPDKVTFTSVLSAC 510
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
K DTLA + +S+ G KEA M +G R F GLL CA +E+GR
Sbjct: 58 KVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGRE 117
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
+ ++P+ Y ++ + ++ G ++A R+ + + ++ W A++
Sbjct: 118 VHAAILKSG-IQPNRYLENTLLSMYAKCGSLTDARRVFDGI-RDRNIVSWTAMI 169
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 203/535 (37%), Positives = 286/535 (53%), Gaps = 68/535 (12%)
Query: 36 DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS---YATNVFSHIK 92
+ C +M +LK++H L+T T L+ L +S S S YA VF I+
Sbjct: 47 ETCSDMSQLKQLHAFT-----LRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 101
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRL 151
+ +N +IRA A S + LY++ML G SPD TFPF+LK C
Sbjct: 102 NHSSFMWNTLIRACAHDVSRKEEA-----FMLYRKMLERGESSPDKHTFPFVLKACAYIF 156
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
G V+ Q+VK G DV+V N +I L+ +CG
Sbjct: 157 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC------------------------ 192
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
LD+A +F M +R++ SWNS+I V+ G AL+LF+EMQ S +P
Sbjct: 193 -------LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-----FEP 240
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYL-RRSGLDC--DVVIGTALVDMYGKCGCVERAY 328
D T+ SVLSACA LG++ G W H +L R+ +D DV++ +L++MY KCG + A
Sbjct: 241 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 300
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM--EAEGVRPNHVTFVGLLSACAH 386
VF+ M K+D +W AMI FA +G +EA + F M + E VRPN VTFVGLL AC H
Sbjct: 301 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNH 360
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
G V KGR F MM Y +EP + HY C++D+++RAG +EA ++ SMPM+PD +W
Sbjct: 361 RGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 420
Query: 447 ALLGGCQMHG-NVELGEKVAQYLIDLDPLNHA-------FYVNLCDMYAKAGRFDDVKKT 498
+LL C G +VEL E++A+ +I N + YV L +YA A R++DV
Sbjct: 421 SLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIV 480
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF----SMKGSPKVVKEELVLILNGLSKI 549
R LM E GIRKE PGCSS+E++G+ HEF + K + ++L +I + L I
Sbjct: 481 RKLMSEHGIRKE-PGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSI 534
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 137/350 (39%), Gaps = 65/350 (18%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
S P+K + +L+ A E K++H QI+K ++ + L C G
Sbjct: 138 SSPDKHTFPFVLK-ACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC-----G 191
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
L A VF + L ++N MI A + E + L+L+++M PD T
Sbjct: 192 CLDLARKVFDEMPERSLVSWNSMIDA-LVRFGEYDSA-----LQLFREMQ-RSFEPDGYT 244
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCD-----DVFVQNSVISLFMACGFVTSARML 194
+L C G + + CD DV V+NS+I ++ CG + A +
Sbjct: 245 MQSVLSACAGL--GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 302
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F M RD+ SWNAMI+G+ G + A++ F RM +
Sbjct: 303 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK---------------------- 340
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
E V+P+ +T +L AC + G ++ G+ + R D I AL
Sbjct: 341 -----------RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-----DYCIEPAL 384
Query: 315 ------VDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKE 357
VD+ + G + A + MP K D + W +++ G E
Sbjct: 385 EHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 434
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/512 (33%), Positives = 284/512 (55%), Gaps = 16/512 (3%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
+ PP + +LR+A ++ H + L R A +
Sbjct: 64 LPPPGPRALPALLRSAARCVGAGAYVRGAHALAFRVGSLDDG-----FVRTALVGAYAAC 118
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF + D+ ++ +M+ + C++ + L + +M +G+ D L
Sbjct: 119 GCVGDARKVFDGMAVRDVVSWGVMLDS-YCQTRNYKEA-----LLQFAKMKNSGVLSDQL 172
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+L C G S++ ++ + + + +++I+L+ +C + A L++ M
Sbjct: 173 ILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGM 232
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+D+VS AM+ GY R+ ++A +F M ++++ SW+++I+G+ + EAL LF
Sbjct: 233 PRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFN 292
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+MQ E ++PD++T+ SV+SACA LG++D KW+H +++ +GL+ + I AL+DM+
Sbjct: 293 DMQ----ECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMF 348
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + A +F EMP+K+ + WT+MI+ FA++G GK A F +M EGV PN VTF+
Sbjct: 349 AKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFL 408
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
LL AC H+GLV +GR F M Y +EP HY CM+D+L RA L EA LI SM +
Sbjct: 409 NLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHL 468
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
P+V VWG+LL C MHG+++LG A+ ++ LDP + V L +Y K+ +D ++
Sbjct: 469 RPNVPVWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNLNDAQEV 528
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
R++MK +G+ KE G S ++++ HEF+ G
Sbjct: 529 RDVMKLQGVSKET-GLSWMDLNEPFHEFTAGG 559
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 119/273 (43%), Gaps = 15/273 (5%)
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SA +GA + + H R G D + TALV Y CGCV A VF M +D +
Sbjct: 78 SAARCVGAGAYVRGAHALAFRVGSLDDGFVRTALVGAYAACGCVGDARKVFDGMAVRDVV 137
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF-VM 399
+W M+ + KEA F +M+ GV + + +LSAC H + G+ M
Sbjct: 138 SWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQLILATVLSACGHIRHLRTGKSIHSYM 197
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ L+ H+ + +I++ + AE+L MP + D+ A++ G + E
Sbjct: 198 LVSDILINAHL--SSALINLYASCASMEMAEKLYNGMPRK-DLVSSTAMVFGYARNRKFE 254
Query: 460 LGEKVAQYLIDLDPLNHAF-YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
+A+Y+ D P + + YA + + ++ N M+E GIR + V
Sbjct: 255 ----IARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPD-----EVT 305
Query: 519 VDGVVHEFSMKGSPKVVKEELVLIL-NGLSKIM 550
+ V+ + GS K I NGL+KI+
Sbjct: 306 MLSVISACANLGSLDKAKWIHAFIKNNGLNKIL 338
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 295/538 (54%), Gaps = 84/538 (15%)
Query: 62 HHSLITRLLFFCALSVSGSLS--YATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
HH L LS+ GSL YA +VF+H + D+ T+N M+RA N
Sbjct: 8 HHKPSLNKLIAHVLSM-GSLGVGYAYSVFAHTRVLDVLTWNSMLRAF------VNSNMPR 60
Query: 120 KCLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKF------------ 166
+ L+ Y +ML + PD TFP LLK C L+ VG ++GQVVK+
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 167 ----GVCDDV---------------FVQNSVISLFMACGFVTSARMLF----------DE 197
C D+ V S+IS +M A +L+ DE
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180
Query: 198 MSNRDVVSW-----------------------------NAMIIGYLRSGDLDVALDLFRR 228
++ +VS +A++ Y + GDL A +F +
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQ 240
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
+ +++++W+++I G+V+ R+ EAL+LF+E+ S ++P+++TI +V+SACA LG
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS---NMRPNEVTILAVISACAQLGD 297
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
++ G+WVH Y+ R+ V + +L+DM+ KCG ++ A +F M KD ++W +M++
Sbjct: 298 LETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNG 357
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
AL+G G+EA F M+ ++P+ +TF+G+L+AC+H+GLV++G+ F + +Y V
Sbjct: 358 LALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRL 417
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
HY CM+D+L RAGL +EA IR MP++PD +WG++LG C+++ N+ELGE+ A+ L
Sbjct: 418 KSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCL 477
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++L+P N Y+ L ++YA+ +++VKK R LM E+GI+K PGCSSV +D + H F
Sbjct: 478 LELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQK-TPGCSSVVIDNIAHSF 534
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 273/480 (56%), Gaps = 13/480 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS A VF +K+ D+ ++N+MI D H + L+LY+++ G
Sbjct: 256 GSSHEAREVFDKMKKRDMVSWNVMIGCYVL----NGDFH--EALELYQKLDMEGFKRTKA 309
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +L C+ G V+ +++ G+ +V V ++++++ CG + AR +F+ M
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAM 369
Query: 199 SNRDVVSWNAMIIGYLRSG---DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
NRD V+W+ +I Y +G D A +F R+ R+ SWN++IT +VQ G A A++
Sbjct: 370 KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMK 429
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
+F+EM ++ +KPD +T +VL ACA LG + K +H + S L+ +VV+ L+
Sbjct: 430 IFREMTGAA---GLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLI 486
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
+MY +CG +E A +F +K ++WTAM++ F+ G EA D F+EM+ EGV+P+ V
Sbjct: 487 NMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDV 546
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
T+ +L C H G +E+G F M ++ + P H+A M+D+L R+G +A+ L+ S
Sbjct: 547 TYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLES 606
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP EPD W L C++HG +ELGE A+ + +LDP + A Y+ + ++YA G ++ V
Sbjct: 607 MPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKV 666
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R M+ERG++K +PG S +EVDG +HEFS G +E+ L L +M+ G+
Sbjct: 667 ASVRKKMEERGLKK-LPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGY 725
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 212/454 (46%), Gaps = 84/454 (18%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C ++ + +EIH ++ S + SL L+ A GS+ A +F ++ D
Sbjct: 120 CSSLAQGREIHNRVFYSGL---DSFQSLANALVTMYARF--GSVGDAKRMFQSLQTRDET 174
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
++N +I A+ S++ D SG L+++K+M C + P+ T+ ++ + G
Sbjct: 175 SWNAVILAH----SQSGD-WSG-ALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGR 227
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++ ++V G D+ V ++I+++ CG AR +FD+M RD+VSWN MI Y+ +G
Sbjct: 228 KIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNG 287
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
D EALEL+Q++ E K K T
Sbjct: 288 DF-------------------------------HEALELYQKLDM----EGFKRTKATFV 312
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
S+L AC+ + A+ G+ VH ++ GLD +V + TALV+MY KCG +E A VF M +
Sbjct: 313 SILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR 372
Query: 338 DTLAWTAMISVFALNGYGKEA------FD----------------------------TFR 363
D +AW+ +I +A NGYGK+A FD FR
Sbjct: 373 DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFR 432
Query: 364 EME-AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
EM A G++P+ VTF+ +L ACA G + + + + L E +V +I++ +R
Sbjct: 433 EMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL-ESNVVVTNTLINMYAR 491
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
G EAERL + E V W A++ +G
Sbjct: 492 CGSLEEAERLF-AAAKEKTVVSWTAMVAAFSQYG 524
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 181/383 (47%), Gaps = 57/383 (14%)
Query: 80 SLSYATNVFSHI--KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SL A +VF + ++ ++ ++N MI A A + HS + L LY +M G+ D
Sbjct: 57 SLVDARSVFESMDWRQRNVVSWNAMIAAYA------QNGHSTEALVLYWRMNLQGLGTDH 110
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+TF +L C+ G ++ +V G+ +S SL
Sbjct: 111 VTFVSVLGACSSLAQG---REIHNRVFYSGL-------DSFQSLA--------------- 145
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
NA++ Y R G + A +F+ ++ R+ SWN++I Q G AL +F
Sbjct: 146 ---------NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIF 196
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+EM+ VKP+ T +V+S + + G+ +H + +G D D+V+ TAL++M
Sbjct: 197 KEMKCD-----VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINM 251
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
YGKCG A VF +M K+D ++W MI + LNG EA + +++++ EG + TF
Sbjct: 252 YGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATF 311
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVE----PHVYHYACMIDILSRAGLFSEAERLI 433
V +L AC+ + +GR + H +++E V ++++ ++ G EA ++
Sbjct: 312 VSILGACSSVKALAQGR-----LVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVF 366
Query: 434 RSMPMEPDVFVWGALLGGCQMHG 456
+M D W L+G +G
Sbjct: 367 NAMK-NRDAVAWSTLIGAYASNG 388
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 174/408 (42%), Gaps = 77/408 (18%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
PD +TF +L C+ D + G +++ ++ D V N++IS++ C + AR +
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F+ M W ++RN+ SWN++I + Q G + EAL
Sbjct: 65 FESMD------W-----------------------RQRNVVSWNAMIAAYAQNGHSTEAL 95
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
L+ M + D +T SVL AC+ L G+ +H + SGLD + AL
Sbjct: 96 VLYWRMNLQG----LGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANAL 148
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
V MY + G V A +F+ + +D +W A+I + +G A F+EM+ + V+PN
Sbjct: 149 VTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-VKPNS 207
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMM----------------------------RHVY-- 404
T++ ++S + ++ +GR + R V+
Sbjct: 208 TTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDK 267
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME-----PDVFVWGALLGGCQMHGNVE 459
+ + + + MI G F EA L + + ME FV ++LG C +
Sbjct: 268 MKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFV--SILGACSSVKALA 325
Query: 460 LGEKVAQYLID--LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
G V ++++ LD A L +MYAK G ++ +K N MK R
Sbjct: 326 QGRLVHSHILERGLDS-EVAVATALVNMYAKCGSLEEARKVFNAMKNR 372
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 11/217 (5%)
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
+PD +T +VL +C+ G + G+ +H +R S + D ++G AL+ MYGKC + A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 330 VFKEMP--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF+ M +++ ++W AMI+ +A NG+ EA + M +G+ +HVTFV +L AC+
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYA-CMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+ +GR + R Y A ++ + +R G +A+R+ +S+ D W
Sbjct: 123 --LAQGR--EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTR-DETSWN 177
Query: 447 ALLGGCQMHGNVELGEKVAQYL-IDLDPLNHAFYVNL 482
A++ G+ ++ + + D+ P N Y+N+
Sbjct: 178 AVILAHSQSGDWSGALRIFKEMKCDVKP-NSTTYINV 213
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 203/535 (37%), Positives = 287/535 (53%), Gaps = 68/535 (12%)
Query: 36 DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS---YATNVFSHIK 92
+ C +M +LK++H + L+T T L+ L +S S S YA VF I+
Sbjct: 113 ETCSDMSQLKQLH-----AFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 167
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRL 151
+ +N +IRA A S + LY++ML G SPD TFPF+LK C
Sbjct: 168 NHSSFMWNTLIRACAHDVSRKEEA-----FMLYRKMLERGESSPDKHTFPFVLKACAYIF 222
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
G V+ Q+VK G DV+V N +I L+ +CG
Sbjct: 223 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC------------------------ 258
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
LD+A +F M +R++ SWNS+I V+ G AL+LF+EMQ S +P
Sbjct: 259 -------LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-----FEP 306
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYL-RRSGLDC--DVVIGTALVDMYGKCGCVERAY 328
D T+ SVLSACA LG++ G W H +L R+ +D DV++ +L++MY KCG + A
Sbjct: 307 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 366
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM--EAEGVRPNHVTFVGLLSACAH 386
VF+ M K+D +W AMI FA +G +EA + F M + E VRPN VTFVGLL AC H
Sbjct: 367 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNH 426
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
G V KGR F MM Y +EP + HY C++D+++RAG +EA ++ SMPM+PD +W
Sbjct: 427 RGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 486
Query: 447 ALLGGCQMHG-NVELGEKVAQYLIDLDPLNHA-------FYVNLCDMYAKAGRFDDVKKT 498
+LL C G +VEL E++A+ +I N + YV L +YA A R++DV
Sbjct: 487 SLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIV 546
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF----SMKGSPKVVKEELVLILNGLSKI 549
R LM E GIRKE PGCSS+E++G+ HEF + K + ++L +I + L I
Sbjct: 547 RKLMSEHGIRKE-PGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSI 600
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 137/350 (39%), Gaps = 65/350 (18%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
S P+K + +L+ A E K++H QI+K ++ + L C G
Sbjct: 204 SSPDKHTFPFVLK-ACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC-----G 257
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
L A VF + L ++N MI A + E + L+L+++M PD T
Sbjct: 258 CLDLARKVFDEMPERSLVSWNSMIDA-LVRFGEYDSA-----LQLFREMQ-RSFEPDGYT 310
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCD-----DVFVQNSVISLFMACGFVTSARML 194
+L C G + + CD DV V+NS+I ++ CG + A +
Sbjct: 311 MQSVLSACAGL--GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 368
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F M RD+ SWNAMI+G+ G + A++ F RM +
Sbjct: 369 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK---------------------- 406
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
E V+P+ +T +L AC + G ++ G+ + R D I AL
Sbjct: 407 -----------RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-----DYCIEPAL 450
Query: 315 ------VDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKE 357
VD+ + G + A + MP K D + W +++ G E
Sbjct: 451 EHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 500
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/400 (41%), Positives = 240/400 (60%), Gaps = 17/400 (4%)
Query: 139 TFPFLLKECTKRLDG-----------LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
+F FLL + LD +G V+ VK G D++V+N+ I + CG
Sbjct: 123 SFTFLLASLSNHLDTEPAAAGSIASRFMGTHVHALAVKAGAAGDLYVRNAQIHFYGVCGD 182
Query: 188 VTSARMLFDEMS-NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
V + R +FDE+ RDVV+WNA++ GY+R+G + VA ++F M R+ SW+++I G+V+
Sbjct: 183 VAAMRKVFDELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVK 242
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G AL +F+ M V + VK ++ I + LSA A LG ++ GK+VH ++R G+
Sbjct: 243 EGEPEVALGVFKNM----VAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTM 298
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
V +G AL+DMY KCG V A VF MP++D AW +MI A +G G +A F +
Sbjct: 299 SVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFV 358
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
+EG P +TFVG+L+AC+ +GLV++GR F +M Y +E + HY CM+D+LSRAGL
Sbjct: 359 SEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLV 418
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
EA LI M + PD +WG +L C+ HG V+LG V LI+LDP + +YV L +Y
Sbjct: 419 QEAVELIEGMRIPPDPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIY 478
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
AKA ++D+V+K R LM RG K G S +E G+VH+F
Sbjct: 479 AKAKKWDEVRKVRKLMSNRGTSKSA-GWSLMEAHGIVHKF 517
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS++ A VF + R D++ +N MI C + H ++L+++ + G P +
Sbjct: 314 GSVAAAKEVFDAMPRRDVFAWNSMI----CGLATHGLGHD--AVQLFEKFVSEGFCPTSI 367
Query: 139 TFPFLLKECTKRLDGLV--GASVYGQVV-KFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
TF +L C++ GLV G + + K+ + ++ ++ L G V A L
Sbjct: 368 TFVGVLNACSR--TGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELI 425
Query: 196 DEMS-NRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
+ M D V W ++ R G +D+ + + ++
Sbjct: 426 EGMRIPPDPVLWGTILSACKRHGLVDLGITVGNKL 460
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/380 (41%), Positives = 237/380 (62%), Gaps = 5/380 (1%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
N++I+ ++ C + AR LF+ M ++V SWN MI GY ++GD+ A + F RM +R+
Sbjct: 301 NAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSI 360
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SW +II G+ Q G EAL LF EM+ + ++ T S LS CA + A++ GK V
Sbjct: 361 SWAAIIAGYAQSGYGEEALHLFVEMKRDGE----RLNRSTFTSTLSTCAEIAALELGKQV 416
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
HG + ++GL+ +G AL+ MY KCG ++ AY VF+ + +K+ ++W MI+ +A +G+G
Sbjct: 417 HGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFG 476
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
KEA F M+ G+ P+ VT VG+LSAC+H+GLV+KG F M Y + + HY C
Sbjct: 477 KEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTC 536
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
MID+L RAG +A+ L+++MP EPD WGALLG ++HGN ELGEK A+ + +++P N
Sbjct: 537 MIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDN 596
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
YV L ++YA +GR+ DV + R M++RG++K VPG S VEV +H F++ S
Sbjct: 597 SGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKK-VPGYSWVEVQNKIHTFTVGDSVHPE 655
Query: 536 KEELVLILNGLSKIMKNGGF 555
++ + L L MK G+
Sbjct: 656 RDRIYTFLEELDLKMKKEGY 675
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 177/398 (44%), Gaps = 75/398 (18%)
Query: 169 CDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRR 228
C + N +++ ++ G + AR LF+ ++ +++SWN M+ GY++ L A +F R
Sbjct: 170 CKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDR 229
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
M +R+ SWN++I+G+ Q G EA LF+E S V D T +++S G
Sbjct: 230 MPERDEVSWNTMISGYAQNGELLEAQRLFEE---SPVR-----DVFTWTAMVSGYVQNGM 281
Query: 289 IDHGK-------------W---VHGYLRRSGLD----------C-DVVIGTALVDMYGKC 321
+D + W + GY++ +D C +V ++ Y +
Sbjct: 282 LDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQN 341
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + +A F MP++D+++W A+I+ +A +GYG+EA F EM+ +G R N TF L
Sbjct: 342 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 401
Query: 382 SACAHSGLVEKGRW-------------CFV------------MMRHVYLV-----EPHVY 411
S CA +E G+ C+V + Y+V E V
Sbjct: 402 STCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVV 461
Query: 412 HYACMIDILSRAGLFSEAERLIRSMP---MEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ MI +R G EA L SM + PD +L C G V+ G + Y
Sbjct: 462 SWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYF-YS 520
Query: 469 IDLD---PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+ D N Y + D+ +AGR DD + NLMK
Sbjct: 521 MTQDYGITANSKHYTCMIDLLGRAGRLDDAQ---NLMK 555
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 165/386 (42%), Gaps = 37/386 (9%)
Query: 117 HSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF--- 173
HS CL+ + P P D + ++ G CD
Sbjct: 13 HSRSCLRSLQTTTTANRKPSTRNQPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLF 72
Query: 174 ---------VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
N++IS ++ AR LF++M RD+VSWN MI G +R +L A
Sbjct: 73 NSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARL 132
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
LF +M +R++ SWN++++G+ Q G +EA E+F EM + I+ +L+A
Sbjct: 133 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK--------NSISWNGMLAAYV 184
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
G I+ + L S D +++ ++ Y K + A G+F MP++D ++W
Sbjct: 185 QNGRIEDAR----RLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNT 240
Query: 345 MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
MIS +A NG EA F E V T+ ++S +G++++ R F M
Sbjct: 241 MISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFDGM---- 292
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
E + + +I + +A L +MP + +V W ++ G +G++
Sbjct: 293 -PEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYAQNGDIAQARNF 350
Query: 465 AQYLIDLDPLNHAFYVNLCDMYAKAG 490
+ D ++ + + YA++G
Sbjct: 351 FDRMPQRDSIS---WAAIIAGYAQSG 373
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 159/364 (43%), Gaps = 64/364 (17%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+CK M + +E+ + PC + +++IT + +G ++ A N F + + D
Sbjct: 309 QCKRMDQARELFEAM---PCQNVSSWNTMIT------GYAQNGDIAQARNFFDRMPQRDS 359
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
++ +I A + + L L+ +M G + TF L C + +G
Sbjct: 360 ISWAAIIAGYA------QSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG 413
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
V+G+VVK G+ +V N+++ ++ CG + A ++F+ + ++VVSWN MI GY R
Sbjct: 414 KQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARH 473
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G AL LF MKK I PD +T+
Sbjct: 474 GFGKEALMLFESMKKTGIL-----------------------------------PDDVTM 498
Query: 277 ASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
VLSAC++ G +D G ++ + + G+ + T ++D+ G+ G ++ A + K MP
Sbjct: 499 VGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP 558
Query: 336 -KKDTLAWTAMISVFALNG---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+ D W A++ ++G G++A EME P++ LLS
Sbjct: 559 FEPDAATWGALLGASRIHGNTELGEKAAKMIFEME-----PDNSGMYVLLSNL----YAA 609
Query: 392 KGRW 395
GRW
Sbjct: 610 SGRW 613
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 280/506 (55%), Gaps = 21/506 (4%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
P +TK + A + +++ + I +I+ + N + +G
Sbjct: 454 PEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWN---------AIIAGYTQNGM 504
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
L A ++F + + ++ MI + + S + L+L ++ +G P +F
Sbjct: 505 LKEAKDLFQKMPVKNSASWAAMI------AGFVQNEESREALELLIELHRSGSVPSDSSF 558
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
L C D +G ++ +K G + +V N +IS++ CG V +F +
Sbjct: 559 TSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRV 618
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
+D VSWN++I G + LD A +F +M KR++ SW +II+ +VQ G AL+LF +M
Sbjct: 619 KDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDM 678
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
+ + KP+++T+ S+LSAC LGAI G+ H + + G D + +G +L+ MY K
Sbjct: 679 LARGI----KPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFK 734
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG E + VF+EMP+ D + W A++ A NG GKEA F +ME EG+ P+ ++F+G+
Sbjct: 735 CG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGV 793
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
L AC+H+GLV++G F M Y + P VYHY CM+D+L RAG SEAE LI +MP++P
Sbjct: 794 LCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKP 853
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
D +W ALLG C++H NVELG++VA+ L + A YV L +++A G +D V + R
Sbjct: 854 DSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRK 913
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEF 526
LMK++G+ KE PG S ++V +H F
Sbjct: 914 LMKDQGLTKE-PGISWIQVKNKLHCF 938
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 216/475 (45%), Gaps = 90/475 (18%)
Query: 96 LYTYNIMIR-ANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRLDG 153
L + +IR + K+ ET TH +C +++ G + F +++ +
Sbjct: 148 LQQFKFVIRHKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNS 207
Query: 154 LV-GASVYGQVVKFGVCDDVFVQNSV------ISLFMACGFVTSARMLFDEMSNRDVVSW 206
++ G S G+V + + D FV ++ ++ + G + AR +F+ M+ R+VVSW
Sbjct: 208 MINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSW 267
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM-QSSSV 265
NAMI GY+++GDL A LF M ++N+ SWNS++TG+ R EA ELF +M + +SV
Sbjct: 268 NAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSV 327
Query: 266 EEMV--------------------------KPDKITIASVLSACAYLGAIDHGKWVHGYL 299
MV +PD+ VLSA L ++ + G L
Sbjct: 328 SWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLE----LIGSL 383
Query: 300 R----RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
R ++G + DVV+G+A+++ Y + G ++ A F+ MP+++ +WT MI+ FA G
Sbjct: 384 RPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRL 443
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+A + + + V T +++A A G ++K R F ++ P+V +
Sbjct: 444 DDAIQLYERVPEQTV----ATKTAMMTAYAQVGRIQKARLIF-----DEILNPNVVAWNA 494
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG------------------------ 451
+I ++ G+ EA+ L + MP++ W A++ G
Sbjct: 495 IIAGYTQNGMLKEAKDLFQKMPVKNSA-SWAAMIAGFVQNEESREALELLIELHRSGSVP 553
Query: 452 -----------CQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDD 494
C G+VE+G + I +++ +N L MYAK G +D
Sbjct: 554 SDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVED 608
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 407 EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
+ H++ I L R G EA R+ M ++ DV W +++ G +G V+ A+
Sbjct: 168 QTHLFQCNTRIQELGRLGRVEEARRVFNEM-IQRDVVSWNSMINGYSQNGKVD----EAR 222
Query: 467 YLID-LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
L D N + L YAK GR ++ ++ M ER +
Sbjct: 223 LLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNV 264
>gi|356507694|ref|XP_003522599.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 535
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/518 (36%), Positives = 281/518 (54%), Gaps = 59/518 (11%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
+M ELK++ I K+ + H +L+FF ALS G+LS+A ++F + +
Sbjct: 17 SMLELKQVQAIITKAG---LHSHLPFTAKLIFFSALSPMGNLSHAHSLFLQTSMHNSFIC 73
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK---------R 150
N MIRA A N ++ + L +Y M T + D T+ F+LK C++ +
Sbjct: 74 NTMIRAFA------NSSYPLQALYIYNHMHTTNVVSDHFTYNFVLKACSRAHKFAQEFVK 127
Query: 151 LDGLV----GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
D + G V+ V+K G+ D +QNS++ ++ CG V A+ LFDE+SNR +VSW
Sbjct: 128 CDEFIIISKGGEVHCTVLKLGLDQDPSIQNSLLCMYSQCGLVHVAQHLFDEISNRSLVSW 187
Query: 207 NAMI------------------------------IG-YLRSGDLDVALDLFRRMKKRNIF 235
N MI IG Y+R GD++ A +F+ M +R+
Sbjct: 188 NIMISAYDRVNDSKSADYLLESMPHKNVVSWNTVIGRYIRLGDIEGARRVFQIMPQRDAV 247
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SWNS+I G V A+ LF EMQ++ V +P ++T+ SVL ACA GA++ G +
Sbjct: 248 SWNSLIAGCVSVKDYEGAMGLFSEMQNAEV----RPTEVTLISVLGACAETGALEMGSKI 303
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H L+ G + +G AL++MY KCG + A+ VF M K W AMI A++GY
Sbjct: 304 HESLKACGHKIEGYLGNALLNMYSKCGKLNSAWEVFNGMRIKTLSCWNAMIVGLAVHGYC 363
Query: 356 KEAFDTFREMEA--EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
+EA F EME+ + VRPN VTF+G+L AC+H GLV+K RW F M Y + P + HY
Sbjct: 364 EEALQLFSEMESGLDTVRPNRVTFLGVLIACSHKGLVDKARWNFDHMAKQYKILPDIKHY 423
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP 473
C++D+LSR GL EA ++I++ P++ +W LLG C+ GNVEL + Q L L
Sbjct: 424 GCIVDLLSRFGLLEEAHQMIKTAPLQNSAILWRTLLGACRTQGNVELAKVSFQQLAKLGR 483
Query: 474 LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
L YV L ++YA+A R+D+V++ R+ M + K+V
Sbjct: 484 LTDGDYVLLSNIYAEAERWDEVERVRSEMIGLHVPKQV 521
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 287/521 (55%), Gaps = 43/521 (8%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
I C + +L +IH II + +Q + R L A + L Y+ +F +
Sbjct: 34 IKSCTHKSQLLQIHAHIITTSSIQDP---IVSLRFLTRTASAPFRDLGYSRRLFDLLTNP 90
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ YN M+RA + S L +Y+ M G+ D L+ F +K C K L L
Sbjct: 91 FVSHYNAMLRAYSLSRSPLEG------LYMYRDMERQGVRADPLSSSFAVKSCIKLLSLL 144
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G ++ ++ G D + S++ L+ CG A LFDE+ +DVV+WN +
Sbjct: 145 FGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVL----- 199
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
I+ + R R+AL LF+ MQS + + +PDK+
Sbjct: 200 --------------------------ISCLTRNKRTRDALGLFEIMQSPTY--LCQPDKV 231
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T +L ACA L A++ G+ +HGY+++ G + + + +L+ MY +CG +++AY VF +M
Sbjct: 232 TCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKM 291
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
+K+ ++W+AMIS ++NG+G+EA + F EM+ GV P TF +LSAC+H GLV++G
Sbjct: 292 TEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGM 351
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F MR +++ P+V+HY C++D+L RAG+ +A LI SM + PD +W LLG C++
Sbjct: 352 AFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRI 411
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
HG+ LGE++ ++LI+L YV L ++Y+ AG +D V + R LMKE+GI P C
Sbjct: 412 HGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYT-TPCC 470
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+++E++GVVH+F++ +K+++ L+ ++K +K G+
Sbjct: 471 TTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGY 511
>gi|326498517|dbj|BAJ98686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 258/442 (58%), Gaps = 12/442 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF + D++T+ MI E ND + + L ++ M D
Sbjct: 214 GMVEEARGVFDEAECRDIFTWTAMI-----SCFERNDMFA-EALHMFSCMRREMWPVDEA 267
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
++ C + G +G V++ G+C + +QN +I ++ C V +AR LFD
Sbjct: 268 LMVSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDSG 327
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D SWN+MI GYL++G ++ A+ LF M ++ SW+++I+G VQ ++ AL +F
Sbjct: 328 DCLDQFSWNSMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGCVQNNQSSHALTVFD 387
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M++ V +PD++TI SV+SAC L A++ GK VH Y+R++ +V+GT+L+DMY
Sbjct: 388 NMRAQGV----RPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLVLGTSLIDMY 443
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR-PNHVTF 377
KCG +E A VF M +K W A+I A+NG ++ + F EMEA PN +TF
Sbjct: 444 MKCGYLEAAMDVFNIMEEKGAPCWNAVIVGLAMNGLVTKSLEIFSEMEASSTAIPNEITF 503
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
G+LSAC H+GLVE+GR F +M+H Y + P++ HY CM+D+L RAG EAE LI SMP
Sbjct: 504 TGVLSACRHAGLVEEGRHFFKLMQHKYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIESMP 563
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M PDV WGALLG C HG E+GE+V + L++LDP + F L ++YAK G + V
Sbjct: 564 MSPDVPAWGALLGACWKHGENEVGERVGRKLVNLDPRHDGFQTMLSNIYAKEGMWQSVND 623
Query: 498 TRNLMKERGIRKEVPGCSSVEV 519
R+ MK+R + K V G S VE+
Sbjct: 624 LRDSMKQRHVPK-VSGYSVVEM 644
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 213/500 (42%), Gaps = 90/500 (18%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS--VSGSLSYA 84
T +L + C ++R L +IH Q I S L S RLL F + + + + ++
Sbjct: 3 TVSLLDAQLARCSSVRHLLQIHGQFIASGLLADAFAAS---RLLLFTSATRLLPFPIHHS 59
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
+ ++ + ++ N +++A CL LY + SPD T P L
Sbjct: 60 FRLLRLVRCPNAFSCNTLLKAALLAGMPH------LCLPLYTSL---PASPDTYTHPILA 110
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
C R D G V ++ G DD++++N+++ ++ CG + AR +FD D V
Sbjct: 111 AACAARRDVSEGRQVQSHAIRHGFGDDLYLRNALMHMYSVCGCLWDARRVFDAGPVWDAV 170
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKRN------------------------------- 233
SWN ++ Y+ +GD+D A+ +F RM KRN
Sbjct: 171 SWNTILAAYVHAGDVDQAVGVFARMPKRNATAVSSMVSLFGRRGMVEEARGVFDEAECRD 230
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
IF+W ++I+ F + EAL +F M+ EM D+ + SV++ACA I +G+
Sbjct: 231 IFTWTAMISCFERNDMFAEALHMFSCMR----REMWPVDEALMVSVVAACAQSEVIRNGE 286
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKC-------------------------------G 322
HG + R+GL + I L+ MY C G
Sbjct: 287 LCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDSGDCLDQFSWNSMIAGYLKNG 346
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
VE A +F MP KD ++W+ MIS N A F M A+GVRP+ VT V ++S
Sbjct: 347 HVENAMTLFSAMPDKDNVSWSTMISGCVQNNQSSHALTVFDNMRAQGVRPDEVTIVSVIS 406
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY----ACMIDILSRAGLFSEAERLIRSMPM 438
AC + +EKG+ H Y+ + Y +ID+ + G A + M
Sbjct: 407 ACTNLSALEKGK-----SVHDYVRQNKCYITLVLGTSLIDMYMKCGYLEAAMDVFNIME- 460
Query: 439 EPDVFVWGALLGGCQMHGNV 458
E W A++ G M+G V
Sbjct: 461 EKGAPCWNAVIVGLAMNGLV 480
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 243/398 (61%), Gaps = 15/398 (3%)
Query: 139 TFPFLLKECTKRLDG---------LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
+F FLL + L+ +G+ V+ VK G D+FV+N+++ + G V
Sbjct: 139 SFTFLLASISNHLNAAGPSASACSFLGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVG 198
Query: 190 SARMLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
+ R +FDE+ RDV++WN ++ GY+R+G + VA ++F M R+ SW++++ G+V+
Sbjct: 199 AMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEE 258
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
AL +F+ M VE+ V+P++ + + LSA A LG ++HGK+VH ++RSG+ +
Sbjct: 259 ELEVALGVFRNM----VEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCM 314
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
+G ALVDMY KCGCV A VF M ++D AW AMI A +G G++A + F +E
Sbjct: 315 NVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISE 374
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
G+ P +VTFVG+L+ C+ SGLV +GR F ++ Y +EP + HY CM+D+L RAGL E
Sbjct: 375 GLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPE 434
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A LI M + PD +WG +L C+ HG V+LG V LI+LDP + +YV L +YAK
Sbjct: 435 AIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAK 494
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
A ++D+V++ R LM RG K G S +E G VH+F
Sbjct: 495 ANKWDEVREVRKLMSSRGTNKSA-GWSLMEAHGKVHKF 531
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 272/453 (60%), Gaps = 11/453 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+GSL + F + ++ ++N MI A ++ T + S L++ M G+ D
Sbjct: 158 AGSLGDSRRFFDEMVDRNVVSWNSMINGYA-QAGNTREACS-----LFEGMRRQGLLADE 211
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T LL C+ + G V+ ++ G D+ + N+++ ++ CG + A FD
Sbjct: 212 FTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDM 271
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M ++ VSW +M+ + +D A D F ++ +++I SWN++I+ +VQGGR EAL+L+
Sbjct: 272 MPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLY 331
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
M+ + PD+ T+A+VLSAC LG + GK +H +R + + V + +L+DM
Sbjct: 332 NRMKLLGL----APDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDM 387
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y +CG V+ A +F EMP K+ ++W A+I A++G ++A FR M + P+ +TF
Sbjct: 388 YARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITF 447
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V LLSAC H GL+E G++ F MRHVY V+P V HYACM+D+L R G ++A LI+ MP
Sbjct: 448 VALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMP 507
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M PDV VWGALLG C++HG++++G++V + L++L+ ++ +V + +M + +++D+K+
Sbjct: 508 MRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKR 567
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
R LM+E G++K + G SS+E + +HE +G
Sbjct: 568 LRKLMREWGMKKNM-GVSSIETNSNIHESGAEG 599
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 207/460 (45%), Gaps = 79/460 (17%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
+R + C ++ L ++H ++ +D S I L +CAL G + YA +F
Sbjct: 15 VRELLRRCGSVHRLNQLHAHLVVH---GVDDVTSQI--LASYCALPAGGGVWYARQLFDR 69
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
I D + YN +IRA C S + L L + M+ GI P+ T PFLLK C +
Sbjct: 70 IPDPDRFVYNSLIRA-YCNSHCPQEA-----LPLLRGMIRRGILPNEFTLPFLLKACARV 123
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
+G VVK G VFV N+++ + + G + +R FDEM +R+VVSWN+MI
Sbjct: 124 QAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMI 183
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY ++G+ A LF M+++ + +
Sbjct: 184 NGYAQAGNTREACSLFEGMRRQGLLA---------------------------------- 209
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG-------- 322
D+ T+ S+L AC+ G ++ GK VH +L G D+++ ALVDMYGKCG
Sbjct: 210 -DEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTC 268
Query: 323 -----------------------CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
++ A F+++P+K ++W AMIS + G EA
Sbjct: 269 FDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEAL 328
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
D + M+ G+ P+ T +LSAC G + G+ +R + P V + ++D+
Sbjct: 329 DLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALFNSLLDM 387
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+R G A L MP + +V W A++G MHG +
Sbjct: 388 YARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMHGRAQ 426
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 143/324 (44%), Gaps = 31/324 (9%)
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D+++++ + S+ A+ G G + A LF R+ + F +NS+I + +EAL
Sbjct: 41 DDVTSQILASYCALPAG----GGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALP 96
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
L + M + + P++ T+ +L ACA + A +H HG + + G V +G AL+
Sbjct: 97 LLRGM----IRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALL 152
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
Y G + + F EM ++ ++W +MI+ +A G +EA F M +G+ +
Sbjct: 153 HSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEF 212
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL---------SRAGLF 426
T V LL AC+ G +E G+ LV H+ C ID++ + G
Sbjct: 213 TLVSLLFACSAEGNLEFGK----------LVHSHLLVRGCRIDLILANALVDMYGKCGDL 262
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
A MP + + W ++L +++ + + + ++ + + Y
Sbjct: 263 LMAHTCFDMMPFK-NAVSWTSMLCALAKRASIDAARDWFEQIPEKSIIS---WNAMISCY 318
Query: 487 AKAGRFDDVKKTRNLMKERGIRKE 510
+ GRF + N MK G+ +
Sbjct: 319 VQGGRFHEALDLYNRMKLLGLAPD 342
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 259/446 (58%), Gaps = 9/446 (2%)
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG--LVGASVYGQVVKFGVC- 169
T + + K + M G+ P+ +TF +L C G +G ++G K G+
Sbjct: 47 TRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGSEALGDLLHGYACKLGLDR 106
Query: 170 DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
+ V V ++I ++ G V AR +FD M +++ V+WN MI GY+RSG +D A +F +M
Sbjct: 107 NHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKM 166
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
+R++ SW ++I GFV G EAL F+EMQ S V KPD + I + L+AC LGA+
Sbjct: 167 PERDLISWTAMINGFVNKGFHEEALAWFREMQISGV----KPDYVAIIAALNACTNLGAL 222
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
G WVH Y+ +V + +L+D+Y +CGCVE A VF +M K+ ++W ++I F
Sbjct: 223 SFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGF 282
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A NG E+ FR+M+ E +P+ VTF G L+AC+H GLVE+G F +M Y + P
Sbjct: 283 AANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGLRYFQIMISDYRISPR 342
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG-NVELGEKVAQYL 468
+ HY C++D+ SRAG +A +L++SMPM+P+ V G+LL C+ HG N L EK+ ++L
Sbjct: 343 IEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACRNHGNNTVLAEKLMKHL 402
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM 528
DL+ +H+ YV L +MYA G+++ K R MK G++K+ PG SS+E+D H F
Sbjct: 403 TDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQ-PGFSSIEIDDCTHVFMA 461
Query: 529 KGSPKVVKEELVLILNGLSKIMKNGG 554
S V + +L +S ++ G
Sbjct: 462 GDSAHVETTNICEVLKLISSNLRLQG 487
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 147/336 (43%), Gaps = 77/336 (22%)
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL--GAID 290
N SW S IT + GR EA + F +M+ + VE P+ IT ++LS C G+
Sbjct: 35 NTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVE----PNHITFIAILSGCGDFPSGSEA 90
Query: 291 HGKWVHGYLRRSGLDCD-VVIGTALVDMYGKCGCVERAYGV------------------- 330
G +HGY + GLD + V++GTA++ MY K G V++A V
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGY 150
Query: 331 ------------FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
F +MP++D ++WTAMI+ F G+ +EA FREM+ GV+P++V +
Sbjct: 151 MRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAII 210
Query: 379 GLLSACAHSGLVEKGRW----------------------------CFVMMRHVY--LVEP 408
L+AC + G + G W C R V+ + +
Sbjct: 211 AALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKR 270
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVA 465
V + +I + G E+ R M E PD + L C G VE G +
Sbjct: 271 TVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 466 QYLID---LDP-LNHAFYVNLCDMYAKAGRFDDVKK 497
Q +I + P + H Y L D+Y++AGR +D K
Sbjct: 331 QIMISDYRISPRIEH--YGCLVDLYSRAGRLEDALK 364
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 44/159 (27%)
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC------ 384
+ ++T++WT+ I++ NG EA F +M GV PNH+TF+ +LS C
Sbjct: 28 LNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSG 87
Query: 385 --------------------------------AHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
+ G V+K R F Y+ + +
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVF-----DYMEDKNSVT 142
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+ MID R+G A ++ MP E D+ W A++ G
Sbjct: 143 WNTMIDGYMRSGQVDNAAKMFDKMP-ERDLISWTAMING 180
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/535 (35%), Positives = 291/535 (54%), Gaps = 60/535 (11%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + + + +++E+++ I KS +H +I++++ F +LS GSL YA +F
Sbjct: 115 LLSKLQQLSSVKEVEQTQCLITKSGLF---NHPFVISKIISFLSLSPLGSLVYAQAIFED 171
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
+ + N MIRA A K + LY M I D T+PF LK C +
Sbjct: 172 TAMDNPFVCNTMIRAYA------KSVFPIKAIYLYNFMHRKDIKSDHFTYPFGLKACARV 225
Query: 151 L---DGLV----------GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
L +G + GA ++ ++ + G+ D F+QNS++ L+ CGF+ AR +FDE
Sbjct: 226 LWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARCVFDE 285
Query: 198 MSNR-------------------------------DVVSWNAMIIGYLRSGDLDVALDLF 226
M+ + +VVSWN +I Y+R G ++ A +F
Sbjct: 286 MTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKVVF 345
Query: 227 RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
+ M +R+ SWNS+I G+VQ AL LF+EM+ ++VE IT+ SVL ACA
Sbjct: 346 QEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVE----ATDITLISVLGACAET 401
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
GA++ G+ +H L++ + + ALVDMY KCG + A+ VF E+ K W AMI
Sbjct: 402 GALEIGRKIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMI 461
Query: 347 SVFALNGYGKEAFDTFR--EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
A++GY +EA F EM +G RPN VTF+G+L AC+H GLV++GR F M + Y
Sbjct: 462 VSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVDEGRTFFNRMVNEY 521
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
+ P + HY CM+D+LSR GL EA +I++MP E + +W LLG C++H +V+L E+
Sbjct: 522 KIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEES 581
Query: 465 AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
Q L ++PL YV L ++YA+A R++DV++ R+ M G+ K+ PG S + +
Sbjct: 582 FQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKK-PGSSHIGI 635
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 262/466 (56%), Gaps = 10/466 (2%)
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
V H + L+ YN +I+A + ++ H +C LY Q+ G P+ TF FL
Sbjct: 2 VLHHSSKPTLFLYNKLIQAYS-----SHPQHQHRCFSLYSQIRLHGFLPNQHTFNFLFSA 56
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
CT +G ++ +K G D+F +++ ++ G + AR LFDEM R V W
Sbjct: 57 CTSLSSSSLGQMLHTHFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVRGVPRW 116
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
NAM+ G R GD+D AL+LF M RN+ W ++I+G+ + +AL LF M+ E
Sbjct: 117 NAMMAGLARFGDMDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQ---E 173
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+ + P+ +T+ S+L ACA L A++ G+ V Y R++G + A+++MY KCG ++
Sbjct: 174 KGIMPNAVTLVSILPACANLXALEIGQRVEAYARKNGFFKNXYASNAVLEMYVKCGKIDA 233
Query: 327 AYGVFKEMPK-KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
A+ VF E+ ++ +W +M+ A++G +A + + +M EG P+ VTFVGLL AC
Sbjct: 234 AWRVFNEIGSLRNLCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACT 293
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
G+V+KGR F + + P + HY CM+D+L RAG EA +I+SM M+PD +W
Sbjct: 294 QGGMVKKGRHIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIW 353
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
GALLG C HGNVEL E A+ L L+P N YV L ++YA AG++D V K R +MK
Sbjct: 354 GALLGACSFHGNVELAEIAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGS 413
Query: 506 GIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
I K G S +E +H+F +K E+ +L+G+ +++K
Sbjct: 414 KITKSA-GHSFIEEGAQLHKFIVKDRSHPKSNEIFALLDGVYEMVK 458
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 187/526 (35%), Positives = 290/526 (55%), Gaps = 47/526 (8%)
Query: 7 MVSYSLLNSPAKVSPPNKEST---KLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHH 63
M S L +PA + P NK + + L + + C ++R L ++H +K+ H
Sbjct: 1 MSSAPLTATPAPLLPANKPKSAAPQHPLLSHLPHCTSLRGLAQLHAAAVKA---GLAAHP 57
Query: 64 SLITRLLFFCALSVSGS--LSYATNVFSHIKR-SDLYTYNIMIRANACKSSETNDTHSGK 120
+L+TRLL C +G L+YA VF + + SD YN ++R A +SS ++ + S
Sbjct: 58 ALVTRLLTLCTGPGAGPAHLAYARQVFDRVTQPSDAVWYNTLLRGYA-RSSSSSSSSSAA 116
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
++++ +ML G++PD TF LLK C G G + VK G +V+ ++I+
Sbjct: 117 AVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLIN 176
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
++ CG +AR+ F VVS+ N++
Sbjct: 177 MYAECGDARAARVTFGRADGDCVVSY-------------------------------NAM 205
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
I V+ R EAL LF+EMQ+ + P +T+ SVLSACA LGA+ G+W+H Y+R
Sbjct: 206 IAAAVRSSRPGEALVLFREMQAKGL----NPTPVTVISVLSACALLGALQLGRWLHDYVR 261
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
+ GL V + TALVDMY KCG +E A VF+ M +D AW+ MI +A +GYG+EA
Sbjct: 262 KLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAIS 321
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F EM+ +G++P+ +TF+GLL AC+HSGLV +G F M+ +V P + HY C+ D+L
Sbjct: 322 LFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKDHGIV-PGIKHYGCVTDLL 380
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
+R+G A + I +P+ P +W LL C HG+VELG++V + +++LD + YV
Sbjct: 381 ARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYV 440
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++ A G ++++ + R LM ++G+ K VPGCSS+E+D VHEF
Sbjct: 441 IFSNLCANTGYWEEMNRVRKLMSDKGVVK-VPGCSSIEIDNTVHEF 485
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 289/519 (55%), Gaps = 50/519 (9%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFF-CALSVSGSLSYATNVFSHIKRSDLYT 98
++R L++ H ++ + C ++ +L+T+LL CA +GS++Y +F + D +
Sbjct: 22 HLRRLQQAHAHLVVTGCHRSR---ALLTKLLTLSCA---AGSIAYTRRLFRSVSDPDSFL 75
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+N +I+A+ +N S + Y++ML + I P TF ++K C +G
Sbjct: 76 FNSLIKAS------SNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTI 129
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
V+ V G + FVQ ++++ + AR +FDE
Sbjct: 130 VHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDE--------------------- 168
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
M +R+I +WNS+I+G+ Q G A EA+E+F +M+ S E PD T S
Sbjct: 169 ----------MPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGE----PDSATFVS 214
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
VLSAC+ LG++D G W+H + +G+ +VV+ T+LV+M+ +CG V RA VF M + +
Sbjct: 215 VLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGN 274
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++WTAMIS + ++GYG EA + F M+A GV PN VT+V +LSACAH+GL+ +GR F
Sbjct: 275 VVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFA 334
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV-FVWGALLGGCQMHGN 457
M+ Y V P V H+ CM+D+ R GL +EA + +R + E V VW A+LG C+MH N
Sbjct: 335 SMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKN 394
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
+LG +VA+ LI +P N YV L +MYA AGR D V+ RN+M +RG++K+V G S++
Sbjct: 395 FDLGVEVAENLISAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQV-GYSTI 453
Query: 518 EVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFG 556
+V+ + FSM E+ L+ L K+ G+
Sbjct: 454 DVENRSYLFSMGDKSHPETNEIYCYLDELMWRCKDAGYA 492
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 273/444 (61%), Gaps = 10/444 (2%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMA 184
+K ML GI+PD +T +L C K D +G S++ V + G+ + ++I ++
Sbjct: 227 FKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAK 286
Query: 185 CGFVTSARMLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
CG A+ +FD + SWNA+I GY + G +DVA LF M+ R+I ++NS++TG
Sbjct: 287 CGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTG 346
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
++ G+ REAL LF M+ + + D T+ ++L+ACA LGA+ G+ +H + +
Sbjct: 347 YIHSGQLREALLLFMSMRRHDL----RVDNFTVVNLLTACASLGALQQGRALHACIEQRL 402
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
++ D+ +GTAL+DMY KCG V+ A VF+ M K+D WTAMI+ A NG GK A + F
Sbjct: 403 VEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFY 462
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
+M +G +PN V+++ +L+AC+HS L+ +GR F MR +Y + P + HY CMID+L R+
Sbjct: 463 QMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRS 522
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
GL EA L+++MP++P+ +W ++L C++H +++L + A++L+ L+P YV L
Sbjct: 523 GLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLY 582
Query: 484 DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF--SMKGSPKVVKEELVL 541
++Y + ++++ K R LM+ER ++K G SS+ V G VH+F S K P+++ E++
Sbjct: 583 NIYIDSRQWENASKIRMLMEERQVKKTA-GYSSITVAGQVHKFVVSDKSHPRIL--EIIA 639
Query: 542 ILNGLSKIMKNGGFGQYIRGLSME 565
+L +S +K+ G+ ++++
Sbjct: 640 MLEEISHRLKSLGYSPLTSQITVD 663
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 211/457 (46%), Gaps = 53/457 (11%)
Query: 39 KNMRELKEIHTQIIKSPCL---QTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSD 95
+ +R+ E+H ++ S L + H L + L C L YA ++F + S
Sbjct: 10 RTVRQAAELHARLTTSGHLLLHPPSARHLLNS--LVNCLEPHPLHLRYALHLFDRMPPST 67
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK---ECTKRLD 152
+ ++ +RA C S +D H + L+++M G+ PD TF FL K ++
Sbjct: 68 -FLFDTALRA--C-SRAGSDPH--RPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHS 121
Query: 153 GLVGASVYGQVVKFGVCDDV-FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
L+ ++ ++ + FV NS+I +++ G AR FDE+ +D V+W +I
Sbjct: 122 LLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLIS 181
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
G + G L L + R++ SW S+I + + RAREA+ F+ M S + P
Sbjct: 182 GLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHG----IAP 237
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG--------- 322
D++T+ +VLSACA L ++ G+ +H + G+ + AL+DMY KCG
Sbjct: 238 DEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVF 297
Query: 323 -------------------C----VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
C V+ A +F EM +D + + +M++ + +G +EA
Sbjct: 298 DALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREAL 357
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
F M +R ++ T V LL+ACA G +++GR + LVE +Y ++D+
Sbjct: 358 LLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQ-RLVEADIYLGTALLDM 416
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ G EA + + M DV W A++ G +G
Sbjct: 417 YMKCGRVDEATIVFQRMGKR-DVHTWTAMIAGLAFNG 452
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 291/522 (55%), Gaps = 30/522 (5%)
Query: 29 LILRNAIDECKNM---RELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYAT 85
+ + +A+ C N+ R +EIH IK L ++ L+ + S+ A
Sbjct: 363 ITIASAVSACTNLSLLRHGREIHGYCIKVEELDSD----LLVGNSLVDYYAKCRSVEVAR 418
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
F IK++DL ++N M+ A + S + ++L +M GI PD +T+ L+
Sbjct: 419 RKFGMIKQTDLVSWNAMLAGYALRGSHE------EAIELLSEMKFQGIEPDIITWNGLVT 472
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM--------LFDE 197
T+ DG + ++ G+ + ++ ACG V + ++ L +
Sbjct: 473 GFTQYGDGKAALEFFQRMHSMGMDPNT---TTISGALAACGQVRNLKLGKEIHGYVLRNH 529
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ V +A+I Y L+VA +F + R++ WNSII+ Q GR+ AL+L
Sbjct: 530 IELSTGVG-SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLL 588
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+EM S+VE + +T+ S L AC+ L A+ GK +H ++ R GLD I +L+DM
Sbjct: 589 REMNLSNVE----VNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDM 644
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
YG+CG ++++ +F MP++D ++W MISV+ ++G+G +A + F+ G++PNH+TF
Sbjct: 645 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITF 704
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
LLSAC+HSGL+E+G F MM+ Y ++P V YACM+D+LSRAG F+E I MP
Sbjct: 705 TNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP 764
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
EP+ VWG+LLG C++H N +L E A+YL +L+P + YV + ++Y+ AGR++D K
Sbjct: 765 FEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAK 824
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEEL 539
R LMKERG+ K PGCS +EV +H F + + + E++
Sbjct: 825 IRCLMKERGVTKP-PGCSWIEVKRKLHSFVVGDTSHPLMEQI 865
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 225/481 (46%), Gaps = 86/481 (17%)
Query: 30 ILRNAIDECKNMRELK---EIHTQIIKSPCLQTNDHHSLITRLL-FFCALSVSGSLSYAT 85
I + + +C+ + L+ ++H Q++ + + L +RLL +C +G + A
Sbjct: 91 IYASILQKCRKLYNLRLGFQVHAQLVVNG---VDVCEFLGSRLLEVYCQ---TGCVEDAR 144
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
+F + +++++ ++ C + +T +KL+ M+ G+ PD FP + K
Sbjct: 145 RMFDKMSERNVFSWTAIMEM-YCGLGDYEET-----IKLFYLMVNEGVRPDHFVFPKVFK 198
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
C++ + VG VY ++ G + V+ S++ +F+ CG + AR F+E+ +DV
Sbjct: 199 ACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFM 258
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMK----KRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
WN M+ GY G+ AL MK K + +WN+II+G+ Q G+ EA + F EM
Sbjct: 259 WNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMG 318
Query: 262 S--------------------------------SSVEEMVKPDKITIASVLSACAYLGAI 289
V E VKP+ ITIAS +SAC L +
Sbjct: 319 GLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLL 378
Query: 290 DHGKWVHGY-LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
HG+ +HGY ++ LD D+++G +LVD Y KC VE A F + + D ++W AM++
Sbjct: 379 RHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAG 438
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
+AL G +EA + EM+ +G+ P+ +T+ GL+ +G + G
Sbjct: 439 YALRGSHEEAIELLSEMKFQGIEPDIITWNGLV-----TGFTQYGD-------------- 479
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+A L E + + SM M+P+ L C N++LG+++ Y+
Sbjct: 480 ------------GKAAL--EFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYV 525
Query: 469 I 469
+
Sbjct: 526 L 526
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 197/441 (44%), Gaps = 57/441 (12%)
Query: 134 SPD-CL-TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
+PD C+ + +L++C K + +G V+ Q+V GV F+ + ++ ++ G V A
Sbjct: 84 NPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDA 143
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R +FD +M +RN+FSW +I+ + G
Sbjct: 144 RRMFD-------------------------------KMSERNVFSWTAIMEMYCGLGDYE 172
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
E ++LF M V E V+PD V AC+ L GK V+ Y+ G + + +
Sbjct: 173 ETIKLFYLM----VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK 228
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
+++DM+ KCG ++ A F+E+ KD W M+S + G K+A +M+ GV+
Sbjct: 229 GSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVK 288
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ VT+ ++S A SG E+ F+ M + +P+V + +I + G EA
Sbjct: 289 PDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALS 348
Query: 432 LIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV--NLCDMY 486
+ R M +E P+ + + C + G ++ Y I ++ L+ V +L D Y
Sbjct: 349 VFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYY 408
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELV-LILNG 545
AK + ++ ++K+ + V + ++ ++++GS + E L + G
Sbjct: 409 AKCRSVEVARRKFGMIKQTDL---------VSWNAMLAGYALRGSHEEAIELLSEMKFQG 459
Query: 546 LSK--IMKNG---GFGQYIRG 561
+ I NG GF QY G
Sbjct: 460 IEPDIITWNGLVTGFTQYGDG 480
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 7/261 (2%)
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDK-ITI-ASVLSACAYLGAIDHGKWVHGY 298
ITGF GG L S ++ PD+ I I AS+L C L + G VH
Sbjct: 55 ITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQ 114
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
L +G+D +G+ L+++Y + GCVE A +F +M +++ +WTA++ ++ G +E
Sbjct: 115 LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEET 174
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F M EGVRP+H F + AC+ G+ + M + E + ++D
Sbjct: 175 IKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGF-EGNSCVKGSILD 233
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ--YLIDLDPLNH 476
+ + G A R + + DVF+W ++ G G + K L + P +
Sbjct: 234 MFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP-DQ 291
Query: 477 AFYVNLCDMYAKAGRFDDVKK 497
+ + YA++G+F++ K
Sbjct: 292 VTWNAIISGYAQSGQFEEASK 312
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 243/398 (61%), Gaps = 15/398 (3%)
Query: 139 TFPFLLKECTKRLDG---------LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
+F FLL + L+ +G+ V+ VK G D+FV+N+++ + G V
Sbjct: 139 SFTFLLASISNHLNAAGPSASACSFLGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVG 198
Query: 190 SARMLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
+ R +FDE+ RDV++WN ++ GY+R+G + VA ++F M R+ SW++++ G+V+
Sbjct: 199 AMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEE 258
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
AL +F+ M VE+ V+P++ + + LSA A LG ++HGK+VH ++RSG+ +
Sbjct: 259 ELEVALGVFRNM----VEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCM 314
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
+G ALVDMY KCGCV A VF M ++D AW AMI A +G G++A + F +E
Sbjct: 315 NVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISE 374
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
G+ P +VTFVG+L+ C+ SGLV +GR F ++ Y +EP + HY CM+D+L RAGL E
Sbjct: 375 GLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPE 434
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A LI M + PD +WG +L C+ HG V+LG V LI+LDP + +YV L +YAK
Sbjct: 435 AIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAK 494
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
A ++D+V++ R LM RG K G S +E G VH+F
Sbjct: 495 ANKWDEVREVRKLMSSRGTNKSA-GWSLMEAHGKVHKF 531
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/457 (35%), Positives = 268/457 (58%), Gaps = 11/457 (2%)
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGI 133
A + G + VF + D+ ++ +M+ + C++ + L L+ +M +G+
Sbjct: 194 AYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSY-CQTRNYKEA-----LLLFAKMKNSGV 247
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
PD L +L C +G +++ ++ + + +++ISL+ +C + A
Sbjct: 248 VPDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEK 307
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
L++EM +D+VS AM+ GY R+ +++A +F M ++++ SW+++I+G+V + EA
Sbjct: 308 LYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEA 367
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
L LF MQ E ++ D+IT+ SV+SACA LG++D KW+H +++ SGL+ + I A
Sbjct: 368 LSLFNGMQ----ECGIRSDEITMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNA 423
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
L+DM+ KCG + A VF EMP K+ + WT+MIS FA++G GK + F +M+ EG PN
Sbjct: 424 LIDMFAKCGGINLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPN 483
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
VTF+ LL AC H+GLV +GR F M Y +EP HY CM+D+L RA L EA LI
Sbjct: 484 EVTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLI 543
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
SM +EP+V +WG+LL C MHG+++LG A+ ++ LDP + V L +Y K+ +
Sbjct: 544 ESMHLEPNVPIWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLN 603
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
+ ++ R +MK + KE G S +E++ HEF+ G
Sbjct: 604 NAQEVRGVMKLHRVSKET-GLSWMELNEPFHEFAAGG 639
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 165/357 (46%), Gaps = 71/357 (19%)
Query: 134 SPDCLTFPFLLKECTK-RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+P P LL+ + G A+ + V+ G DD FV ++ + ACG V R
Sbjct: 146 APGPRALPALLRSAARCEGAGAYVAATHALAVRTGALDDGFVGTALAGAYAACGCVRDTR 205
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+FD M+ RDVVSW M+ Y ++ RN +E
Sbjct: 206 KVFDGMAVRDVVSWGVMLDSYCQT---------------RNY----------------KE 234
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
AL LF +M++S V PD++ +A+VL AC ++ + GK +H Y+ S + I +
Sbjct: 235 ALLLFAKMKNSG----VVPDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISS 290
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN-------------------- 352
AL+ +Y C +E A ++ EMP+KD ++ TAM+S +A N
Sbjct: 291 ALISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVS 350
Query: 353 ------GY-----GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
GY EA F M+ G+R + +T + ++SACA+ G ++K +W ++
Sbjct: 351 WSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIK 410
Query: 402 HVYLVEPHVYHYA-CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+ L + V H +ID+ ++ G + A + MP++ +V W +++ MHG+
Sbjct: 411 NSGLNK--VLHICNALIDMFAKCGGINLALNVFNEMPLK-NVITWTSMISAFAMHGD 464
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 13/230 (5%)
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
A AY+ A H R+G D +GTAL Y CGCV VF M +D ++
Sbjct: 165 AGAYVAA------THALAVRTGALDDGFVGTALAGAYAACGCVRDTRKVFDGMAVRDVVS 218
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF-VMM 400
W M+ + KEA F +M+ GV P+ + +L AC H + G+ M+
Sbjct: 219 WGVMLDSYCQTRNYKEALLLFAKMKNSGVVPDQLILATVLPACGHIRHLRIGKAIHSYML 278
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
++ H+ + +I + + AE+L MP + D+ A++ G + VE+
Sbjct: 279 VSDMIIGAHI--SSALISLYASCANMEMAEKLYNEMPRK-DLVSSTAMVSGYARNRKVEI 335
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
+ + + D ++ + + Y + + ++ N M+E GIR +
Sbjct: 336 ARSIFDGMPEKDVVS---WSAMISGYVDSNQPNEALSLFNGMQECGIRSD 382
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 243/398 (61%), Gaps = 15/398 (3%)
Query: 139 TFPFLLKECTKRLDG---------LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
+F FLL + L+ +G+ V+ VK G D+FV+N+++ + G V
Sbjct: 139 SFTFLLASISNHLNAAGPSASACSFLGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVG 198
Query: 190 SARMLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
+ R +FDE+ RDV++WN ++ GY+R+G + VA ++F M R+ SW++++ G+V+
Sbjct: 199 AMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEE 258
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
AL +F+ M VE+ V+P++ + + LSA A LG ++HGK+VH ++RSG+ +
Sbjct: 259 ELEVALGVFRNM----VEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCM 314
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
+G ALVDMY KCGCV A VF M ++D AW AMI A +G G++A + F +E
Sbjct: 315 NVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISE 374
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
G+ P +VTFVG+L+ C+ SGLV +GR F ++ Y +EP + HY CM+D+L RAGL E
Sbjct: 375 GLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPE 434
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A LI M + PD +WG +L C+ HG V+LG V LI+LDP + +YV L +YAK
Sbjct: 435 AIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAK 494
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
A ++D+V++ R LM RG K G S +E G VH+F
Sbjct: 495 ANKWDEVREVRKLMSSRGTNKSA-GWSLMEAHGKVHKF 531
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 185/540 (34%), Positives = 286/540 (52%), Gaps = 71/540 (13%)
Query: 3 KKLQMVSYSLL--NSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTN 60
++LQ +S L N +PP S + + + K+IH IIK T+
Sbjct: 59 QQLQHHPHSTLKFNPTPLQTPPTSPSQH--------DLSTLEQTKQIHAHIIK-----TH 105
Query: 61 DHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
HH+L L F + +S S + + S+ KR+
Sbjct: 106 FHHALQIPLNDFPS-GLSPSAQWNFVITSYTKRNQ----------------------PRN 142
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L +Y Q+ D P +LK C + +G ++G V+K G+ DVFV N+++
Sbjct: 143 ALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALML 202
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSW----NAMIIGYLRSGDLDVALDLFRRMKKRNIFS 236
++ C V AR++FD+M RDVVSW A++ Y + G L +A LF + ++ + S
Sbjct: 203 MYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 262
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
W ++I G ++ R E +LF MQ EE + P++IT+
Sbjct: 263 WTAMIAGCIRSNRLEEGTKLFIRMQ----EENIFPNEITM-------------------- 298
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
L + ++ D ++ TALVDMY KCG + A +F E +D W A+I+ FA++GYG+
Sbjct: 299 --LNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGE 356
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
EA D F EME +GV+PN +TF+GLL AC+H+GLV +G+ F M H + + P + HY CM
Sbjct: 357 EALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCM 416
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
+D+L RAGL EA +I+SMP++P+ VWGAL+ C++H N +LGE A L++++P N
Sbjct: 417 VDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENC 476
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM--KGSPKV 534
+ V + ++YA A R+ D R MK G++KE PG S +EV+G VHEF M + P++
Sbjct: 477 GYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKE-PGHSVIEVNGTVHEFLMGDQSHPQI 535
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 170/472 (36%), Positives = 263/472 (55%), Gaps = 46/472 (9%)
Query: 60 NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
+ H +++ G + A +F I D+ ++N MI S +
Sbjct: 150 SSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMI------SGYVETGNYK 203
Query: 120 KCLKLYKQMLC-TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSV 178
+ L+L+K+M+ T + PD T ++ C + +G V+ + G ++ + N++
Sbjct: 204 EALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNAL 263
Query: 179 ISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWN 238
I L Y + G+++ A +LF + +++ SWN
Sbjct: 264 IDL-------------------------------YSKFGEVETACELFDGLWNKDVISWN 292
Query: 239 SIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY 298
++I G+ +EAL LFQEM S P+ +T+ S+L ACA+LGAID G+W+H Y
Sbjct: 293 TLIGGYTHMNLYKEALLLFQEMLRSGE----TPNDVTMLSILPACAHLGAIDIGRWIHVY 348
Query: 299 LRRS--GLDCDVV-IGTALVDMYGKCGCVERAYGVF-KEMPKKDTLAWTAMISVFALNGY 354
+ + G+ +V + T+L+DMY KCG ++ A VF M + W AMIS FA++G
Sbjct: 349 INKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGR 408
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
AFD F M G+ P+ +TFVGLLSAC+HSG+++ GR F M Y + P + HY
Sbjct: 409 ANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYG 468
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
CMID+L +GLF EAE +I +MPMEPD +W +LL C++HGN+ELGE A+ LI ++P
Sbjct: 469 CMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPG 528
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
N YV L ++YA AGR+++V K R L+ ++G++K+VPGCSS+E+D VVHEF
Sbjct: 529 NSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEF 580
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 230/421 (54%), Gaps = 25/421 (5%)
Query: 44 LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS-GSLSYATNVFSHIKRSDLYTYNIM 102
++ IH Q+IK+ TN +++LL FC +S YA +VF I+ +L +N M
Sbjct: 4 VRXIHAQMIKTGLHNTN---YALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTM 60
Query: 103 IRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
R +A S + LKLY M+ G+ PD TFPFLLK C K G ++G
Sbjct: 61 FRGHALSSDPVS------ALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGH 114
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
V+K G D++V S+IS++ G + AR +FD S+RDVVS+ A+I GY+ G ++ A
Sbjct: 115 VLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESA 174
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
LF + +++ SWN++I+G+V+ G +EALELF+EM + V+PD+ T+ +V+SA
Sbjct: 175 QKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMT---NVRPDESTMVTVVSA 231
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
CA +I+ G+ VH ++ G ++ I AL+D+Y K G VE A +F + KD ++W
Sbjct: 232 CAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISW 291
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
+I + KEA F+EM G PN VT + +L ACAH G ++ GRW H
Sbjct: 292 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI-----H 346
Query: 403 VYL------VEPHVYHY-ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
VY+ V +V +ID+ ++ G A+++ S + W A++ G MH
Sbjct: 347 VYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMH 406
Query: 456 G 456
G
Sbjct: 407 G 407
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 291/601 (48%), Gaps = 83/601 (13%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
PP L + + C++ + H ++ S L + ++ L SV +
Sbjct: 3 PPCPAVALPTLLSRLRACRSASHALQCHALLLTSGHLAASPLR--LSNHLLLALASVPSA 60
Query: 81 LSYATNVFSHIK---RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+ A VF+ + D + +N IR +A L + +M G+ PD
Sbjct: 61 AALADVVFARLPLPAARDPFAWNTAIRLHAPARPRA-------ALLYFARMRRCGVRPDA 113
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV----------------------- 174
TFP +LK C G V+ + V+ G+ D+F
Sbjct: 114 YTFPAVLKACGCAPGCRAGLLVHAEAVRRGLAADLFTVNALISFYCRILDIRSGRKVFDE 173
Query: 175 ----------QNSVISLFMACG---------------------------------FVTSA 191
NS+++ ++ CG V A
Sbjct: 174 AGGVSRDLVSWNSMVAGYVGCGEMGLAQEMFDEMPQKDTFSWATLIDGYGKQGGAGVDRA 233
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R LFD+M RD+V WN+MI GY R G +D A LF M +RN+ SW+ +I G V G A+
Sbjct: 234 RELFDQMPERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVSCGEAK 293
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EALE FQ M + +PD+I +SACA LGA++ G+W+H YL + L DVV+
Sbjct: 294 EALEYFQSMLRCGL----RPDRIAAVGAVSACAQLGALEQGRWLHSYLEKKKLLSDVVVQ 349
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
TAL+DMY KCGC++ A +F+ M ++ + W MI +G+G +A F MEAE V
Sbjct: 350 TALIDMYVKCGCLDLAMLIFESMAERSVVTWNVMIVGLGTHGFGLDAVTLFHRMEAESVA 409
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
+ ++ +G+L+AC H+GLV +G F M+ + ++P V HY ++D+L RAG +A
Sbjct: 410 VDDLSVLGMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARH 469
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
I +MPMEP +WG+LL C+ H VEL E + L DL + YV L ++YA G
Sbjct: 470 AIETMPMEPTPELWGSLLAACRSHSCVELAELSVERLADLGADDSGVYVLLSNIYADEGM 529
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+ DV + R LM + G+RK++ G S +EVDG +HEF + K+E+ L+L LS ++
Sbjct: 530 WGDVLRIRKLMSDEGMRKDI-GRSVIEVDGEIHEFVNGVGSYICKDEMYLMLWNLSNMVA 588
Query: 552 N 552
+
Sbjct: 589 S 589
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/400 (41%), Positives = 240/400 (60%), Gaps = 17/400 (4%)
Query: 139 TFPFLLKECTKRLDG-----------LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
+F FLL + LD +G V+ VK G D++V+N+ I + CG
Sbjct: 123 SFTFLLASLSNHLDTEPAAAGSIASRFMGTHVHALAVKAGAAGDLYVRNAQIHFYGVCGD 182
Query: 188 VTSARMLFDEMS-NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
V + R +FDE+ RDVV+WNA++ GY+R+G + VA ++F M R+ SW+++I G+V+
Sbjct: 183 VAAMRKVFDELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVK 242
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G AL +F+ M V + VK ++ I + LSA A LG ++ GK+VH ++R G+
Sbjct: 243 EGEPEVALGVFKNM----VAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTM 298
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
V +G AL+DMY KCG V A VF MP++D AW +MI A +G G +A F +
Sbjct: 299 SVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFV 358
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
+EG P +TFVG+L+AC+ +GLV++GR F +M Y +E + HY CM+D+LSRAGL
Sbjct: 359 SEGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLV 418
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
EA LI M + PD +WG +L C+ HG V+LG V LI+LDP + +YV L +Y
Sbjct: 419 QEAVELIEGMRIPPDPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIY 478
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
AKA ++D+V+K R LM RG K G S +E G+VH+F
Sbjct: 479 AKAKKWDEVRKVRKLMSNRGTSKSA-GWSLMEAHGIVHKF 517
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS++ A VF + R D++ +N MI C + H ++L+++ + G P +
Sbjct: 314 GSVAAAKEVFDAMPRRDVFAWNSMI----CGLATHGLGHDA--VQLFEKFVSEGFCPTSI 367
Query: 139 TFPFLLKECTKRLDGLV--GASVYGQVV-KFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
TF +L C++ GLV G + + K+ + ++ ++ L G V A L
Sbjct: 368 TFVGVLNACSR--TGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELI 425
Query: 196 DEMS-NRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
+ M D V W ++ R G +D+ + + ++
Sbjct: 426 EGMRIPPDPVLWGTILSACKRHGLVDLGITVGNKL 460
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/500 (36%), Positives = 271/500 (54%), Gaps = 18/500 (3%)
Query: 55 PCLQT--NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSE 112
P L+T ++ L+ RLL +L YA +F H + S + YN +I+A
Sbjct: 3 PGLRTGVDETKDLLQRLLLI------PNLVYARKLFDHHQNSCTFLYNKLIQAYYVHH-- 54
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDV 172
+ + LY + G+ P TF F+ ++ Q + G D
Sbjct: 55 ----QPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDS 110
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
F ++I+ + G + AR +FDEMS RDV WNAMI GY R GD+ A++LF M ++
Sbjct: 111 FCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK 170
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
N+ SW ++I+GF Q G EAL++F M+ ++ VKP+ IT+ SVL ACA LG ++ G
Sbjct: 171 NVTSWTTVISGFSQNGNYSEALKMFLCMEK---DKSVKPNHITVVSVLPACANLGELEIG 227
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL-AWTAMISVFAL 351
+ + GY R +G ++ + A ++MY KCG ++ A +F+E+ + L +W +MI A
Sbjct: 228 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 287
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
+G EA F +M EG +P+ VTFVGLL AC H G+V KG+ F M V+ + P +
Sbjct: 288 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 347
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
HY CMID+L R G EA LI++MPM+PD VWG LLG C HGNVE+ E ++ L L
Sbjct: 348 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 407
Query: 472 DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGS 531
+P N V + ++YA ++D V + R LMK+ + K VEV VH+F+++
Sbjct: 408 EPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK 467
Query: 532 PKVVKEELVLILNGLSKIMK 551
E+ +L + + MK
Sbjct: 468 SHPRSYEIYQVLEEIFRRMK 487
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 169/442 (38%), Positives = 260/442 (58%), Gaps = 13/442 (2%)
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS--VYGQVVKFGVC- 169
T + + K + M +G+ P+ +TF LL C G S ++G K G+
Sbjct: 38 TRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSGSETLSNLLHGYACKLGLDR 97
Query: 170 DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
V V ++I ++ G V AR++FD M + + V+WN MI GY+RSG +D A+ +F +M
Sbjct: 98 THVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMRSGQVDNAVKMFDKM 157
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
+R++ SW ++I GFV+ G EAL F+EMQ S V +PD + I + L+AC LGA+
Sbjct: 158 PERDLISWTAMINGFVKKGFHEEALVWFREMQISGV----RPDYVAIIAALNACTNLGAL 213
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
G WVH Y+ +V + +L+D+Y +CGCVE A VF +M K+ ++W ++I F
Sbjct: 214 SFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGF 273
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A NG E+ FR+M+ EG +P+ VTF G L+AC+H GLVE+G F M+ Y + P
Sbjct: 274 AANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPR 333
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG-NVELGEKVAQYL 468
+ HY C++D+ SRAG +A ++I SMPM+P+ V G+LL C+ HG N L E++ ++L
Sbjct: 334 IEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHL 393
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM 528
DL+ +H+ YV L +MYA G+++ + R MK G++K+ PG SS+E+D H F
Sbjct: 394 SDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQ-PGFSSIEIDDCTHVFMA 452
Query: 529 KGSPKV----VKEELVLILNGL 546
S V ++E L L+ + L
Sbjct: 453 GDSAHVETAIIREVLELVSSDL 474
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 142/333 (42%), Gaps = 77/333 (23%)
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL--GAIDHGK 293
SW S IT + GR EA + F +M+ S VE P+ IT ++LS C G+
Sbjct: 29 SWTSRITLLTRNGRLAEAAKXFSDMRLSGVE----PNHITFIALLSGCGDFPSGSETLSN 84
Query: 294 WVHGYLRRSGLD-CDVVIGTALVDMYGK-------------------------------C 321
+HGY + GLD V++GTA++ MY K
Sbjct: 85 LLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMRS 144
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G V+ A +F +MP++D ++WTAMI+ F G+ +EA FREM+ GVRP++V + L
Sbjct: 145 GQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAAL 204
Query: 382 SACAHSGLVEKGRW----------------------------CFVMMRHVY--LVEPHVY 411
+AC + G + G W C R V+ + + V
Sbjct: 205 NACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVV 264
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ +I + G E+ R M E PD + L C G VE G + Q +
Sbjct: 265 SWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTM 324
Query: 469 ---IDLDP-LNHAFYVNLCDMYAKAGRFDDVKK 497
+ P + H Y L D+Y++AGR +D K
Sbjct: 325 KRDYGISPRIEH--YGCLVDLYSRAGRLEDALK 355
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 9/156 (5%)
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
+ + T++WT+ I++ NG EA F +M GV PNH+TF+ LLS C G
Sbjct: 19 LNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGC---GDF 75
Query: 391 EKGRWCFVMMRHVY-----LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
G + H Y L HV +I + S+ G +A RL+ + + W
Sbjct: 76 PSGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKA-RLVFDYMEDINSVTW 134
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
++ G G V+ K+ + + D ++ +N
Sbjct: 135 NTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMIN 170
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 273/444 (61%), Gaps = 10/444 (2%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMA 184
+K ML GI+PD +T +L C K D +G S++ V + G+ + ++I ++
Sbjct: 227 FKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAK 286
Query: 185 CGFVTSARMLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
CG A+ +FD + SWNA+I GY + G +DVA LF M+ R+I ++NS++TG
Sbjct: 287 CGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTG 346
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
++ G+ REAL LF M+ + + D T+ ++L+ACA LGA+ G+ +H + +
Sbjct: 347 YIHSGQLREALLLFMSMRRHDL----RVDNFTVVNLLTACASLGALQQGRALHACIEQRL 402
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
++ D+ +GTAL+DMY KCG V+ A VF+ M K+D WTAMI+ A NG GK A + F
Sbjct: 403 VEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFY 462
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
+M +G +PN V+++ +L+AC+HS L+ +GR F MR +Y + P + HY CMID+L R+
Sbjct: 463 QMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRS 522
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
GL EA L+++MP++P+ +W ++L C++H +++L + A++L+ L+P YV L
Sbjct: 523 GLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLY 582
Query: 484 DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF--SMKGSPKVVKEELVL 541
++Y + ++++ K R LM+ER ++K G SS+ V G VH+F S K P+++ E++
Sbjct: 583 NIYIDSRQWENASKIRMLMEERQVKKTA-GYSSITVAGQVHKFVVSDKSHPRIL--EIIA 639
Query: 542 ILNGLSKIMKNGGFGQYIRGLSME 565
+L +S +K+ G+ ++++
Sbjct: 640 MLEEISHRLKSLGYSPLTSQITVD 663
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 211/456 (46%), Gaps = 51/456 (11%)
Query: 39 KNMRELKEIHTQIIKSP--CLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+ +R+ E+H ++ S L L+ L+ C L YA ++F + S
Sbjct: 10 RTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVN-CLEPHPLHLRYALHLFDRMPPST- 67
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK---ECTKRLDG 153
+ ++ +RA C S +D H + L+++M G+ PD TF FL K ++
Sbjct: 68 FLFDTALRA--C-SRAGSDPH--RPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSL 122
Query: 154 LVGASVYGQVVKFGVCDDV-FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
L+ ++ ++ + FV NS+I +++ G AR FDE+ +D V+W +I G
Sbjct: 123 LLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISG 182
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+ G L L + R++ SW S+I + + RAREA+ F+ M S + PD
Sbjct: 183 LAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHG----IAPD 238
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG---------- 322
++T+ +VLSACA L ++ G+ +H + G+ + AL+DMY KCG
Sbjct: 239 EVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFD 298
Query: 323 ------------------C----VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
C V+ A +F EM +D + + +M++ + +G +EA
Sbjct: 299 ALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALL 358
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F M +R ++ T V LL+ACA G +++GR + LVE +Y ++D+
Sbjct: 359 LFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQ-RLVEADIYLGTALLDMY 417
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ G EA + + M + DV W A++ G +G
Sbjct: 418 MKCGRVDEATIVFQRMG-KRDVHTWTAMIAGLAFNG 452
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 277/484 (57%), Gaps = 21/484 (4%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC---LKLYKQMLCTGISP 135
G ++ A +VF + +N MI + SG C +L+++M+ +
Sbjct: 246 GDVNAARSVFEEVDGKFDVVWNAMI---------SGYVQSGMCADAFELFRRMVSEKVPL 296
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVK----FGVCDDVFVQNSVISLFMACGFVTSA 191
D TF +L C + G SV+GQ+++ F + V N++++L+ G + A
Sbjct: 297 DEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIA 356
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
+ +FD M+ +DVVSWN ++ GY+ SG LD A+++F+ M +N SW +++G+V GG +
Sbjct: 357 KRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSE 416
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
+AL+LF +M++ E VKP T A ++AC LGA+ HG+ +H +L + G + G
Sbjct: 417 DALKLFNQMRA----EDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAG 472
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
AL+ MY KCG V A VF MP D+++W AMIS +G+G+EA + F +M AEG+
Sbjct: 473 NALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGID 532
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ ++F+ +L+AC H+GLV++G F M+ + + P HYA +ID+L R+G EA
Sbjct: 533 PDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARD 592
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
LI++MP EP +W A+L GC+ +G++E G A L + P + Y+ L + Y+ AGR
Sbjct: 593 LIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGR 652
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+ D + R LM++RG++KE PGCS +EV +H F + + +E+ L + M+
Sbjct: 653 WVDAARVRKLMRDRGVKKE-PGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMR 711
Query: 552 NGGF 555
G+
Sbjct: 712 KLGY 715
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 212/463 (45%), Gaps = 67/463 (14%)
Query: 73 CALSVSGSLSYATNVFSHIK--RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
A + +G L A F + R D +N M+ A A S + + ++ +L
Sbjct: 100 AAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASL------AAPAVSVFHALLG 153
Query: 131 TG-ISPDCLTFPFLLKECTK--RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
+G + PD +F L+ + L ++ V+K G + V N++I+L+M C
Sbjct: 154 SGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDT 213
Query: 188 VTS---ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
+ AR + DEM ++D ++W M++GY+R GD++ A +F + + WN++I+G+
Sbjct: 214 PEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGY 273
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG- 303
VQ G +A ELF+ M V E V D+ T SVLSACA G HGK VHG + R
Sbjct: 274 VQSGMCADAFELFRRM----VSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQP 329
Query: 304 ---LDCDVVIGTALVDMYGK-------------------------------CGCVERAYG 329
+ + + ALV +Y K GC+++A
Sbjct: 330 NFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVE 389
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VFK MP K+ L+W M+S + G ++A F +M AE V+P T+ G ++AC G
Sbjct: 390 VFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGA 449
Query: 390 VEKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
++ GR H +LV E ++ + ++ G ++A + MP D W
Sbjct: 450 LKHGR-----QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP-NLDSVSW 503
Query: 446 GALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLCD 484
A++ HG+ +EL +++ ID D ++ + C+
Sbjct: 504 NAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN 546
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 261/455 (57%), Gaps = 21/455 (4%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG---KCLKLYKQMLCTGISP 135
G + A +VF + +N MI + HSG + +L+++M+ +
Sbjct: 242 GDVGAARSVFEEVDVKFDVVWNAMI---------SGYVHSGMVVEAFELFRRMVLERVPL 292
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVK----FGVCDDVFVQNSVISLFMACGFVTSA 191
D TF +L C G SV+GQ+ + F + V N++++L+ CG + A
Sbjct: 293 DEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVA 352
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R +FD M ++DVVSWN ++ GY+ S LD A+++F M +N SW +++G+V GG +
Sbjct: 353 RRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSE 412
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
+AL+LF M++ E VKP T A +SAC LG++ HGK +HG+L + G + G
Sbjct: 413 DALKLFNRMRA----EDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAG 468
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
AL+ MY +CG V+ A +F MP D+++W AMIS +G+G+EA + F M AEG+
Sbjct: 469 NALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIY 528
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ ++F+ +L+AC HSGLV++G F M+ + + P HY +ID+L RAG EA
Sbjct: 529 PDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARD 588
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
LI++MP EP +W A+L GC+ G++ELG A L + P + Y+ L + Y+ AGR
Sbjct: 589 LIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGR 648
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ D + R LM++RG++KE PGCS +E VH F
Sbjct: 649 WVDAARVRKLMRDRGVKKE-PGCSWIEAGNKVHVF 682
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 221/504 (43%), Gaps = 90/504 (17%)
Query: 28 KLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS----------- 76
+L ++ +R L+ +H +++ S L H L RL+ LS
Sbjct: 24 RLAASRSLTSSSFLRALRCLHARLLTSALLHAPPHPHLTLRLIHLYTLSGDLPAAATLFR 83
Query: 77 ----------------VSGSLSYATNVFSHIK--RSDLYTYNIMIRANACKSSETNDTHS 118
+G L A + F + R D +N +I A A S H+
Sbjct: 84 ADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARAS------HA 137
Query: 119 GKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRLDGLVG--ASVYGQVVKFGVCDDVFVQ 175
+ +++ +L +G + PD +F LL + V A + V+K G + V
Sbjct: 138 APAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVS 197
Query: 176 NSVISLFMACGFVTS---ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
N++++L+M C + + AR + DEM ++D ++W M++GY+R GD+ A +F + +
Sbjct: 198 NALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVK 257
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
WN++I+G+V G EA ELF+ M V E V D+ T SVLSACA G HG
Sbjct: 258 FDVVWNAMISGYVHSGMVVEAFELFRRM----VLERVPLDEFTFTSVLSACANAGFFAHG 313
Query: 293 KWVHGYLRRSG----LDCDVVIGTALVDMYGKCG-------------------------- 322
K VHG + R + + + ALV +Y KCG
Sbjct: 314 KSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSG 373
Query: 323 -----CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
C+++A VF+EMP K+ L+W M+S + G+ ++A F M AE V+P T+
Sbjct: 374 YVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTY 433
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAGLFSEAERLI 433
G +SAC G ++ G+ H +LV E +I + +R G EA +
Sbjct: 434 AGAISACGELGSLKHGKQL-----HGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMF 488
Query: 434 RSMPMEPDVFVWGALLGGCQMHGN 457
MP D W A++ HG+
Sbjct: 489 LVMP-NIDSVSWNAMISALGQHGH 511
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 299/528 (56%), Gaps = 26/528 (4%)
Query: 45 KEIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMI 103
K++H ++I+S P + +LI L C GS A VF+ ++ + ++ ++I
Sbjct: 290 KQLHAKVIRSLPQIDPYVASALI-ELYAKC-----GSFKEAKRVFNSLQDRNSVSWTVLI 343
Query: 104 RAN---ACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+ C S K ++L+ QM ++ D L+ C R+D +G ++
Sbjct: 344 GGSLQYECFS---------KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 394
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+K G + V NS+ISL+ CG + +A +F MS RD+VSW +MI Y + G++
Sbjct: 395 SLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII 454
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A + F M RN +WN+++ ++Q G + L+++ M S ++ V PD +T ++
Sbjct: 455 KAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS---QKDVTPDWVTYVTLF 511
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
CA +GA G + G+ ++GL +V + A + MY KCG + A +F + KD +
Sbjct: 512 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVV 571
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+W AMI+ ++ +G GK+A TF +M ++G +P+++++V +LS C+HSGLV++G+ F MM
Sbjct: 572 SWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 631
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
V+ + P + H++CM+D+L RAG +EA+ LI MPM+P VWGALL C++HGN EL
Sbjct: 632 TRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDEL 691
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
E A+++ +LD + Y+ L +Y+ AG+ DD + R LM+++GI+K PG S +EV+
Sbjct: 692 AELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKN-PGYSWMEVE 750
Query: 521 GVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSMEAQV 568
VH F + V +++ I N L ++M+ Y+R S +++
Sbjct: 751 NKVHVFK---ADDVSHPQVIAIRNKLDELMEKIAHLGYVRTESPRSEI 795
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 213/476 (44%), Gaps = 30/476 (6%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L +A C + + + + IK P ++IT + + GSLS A +F
Sbjct: 45 LLHAYFSCGALSDARRLLRADIKEP--------NVITHNIMMNGYAKQGSLSDAEELFDR 96
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLLKECTK 149
+ R D+ ++N ++ S L+ + M +G S P+ TF ++K C
Sbjct: 97 MPRRDVASWNTLM------SGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGA 150
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+ + G KF D V+ +++ +F+ CG+V A LF ++ + N+M
Sbjct: 151 LGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSM 210
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
+ GY + +D A++ F M +R++ SWN +I Q GR REAL L EM + V
Sbjct: 211 LAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH----RKGV 266
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
+ D T S L+ACA L ++ GK +H + RS D + +AL+++Y KCG + A
Sbjct: 267 RLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKR 326
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF + +++++WT +I ++ + F +M AE + + L+S C +
Sbjct: 327 VFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMD 386
Query: 390 VEKGRWCFVMMRHVYLVEPH---VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+ GR + + L H + +I + ++ G AE + SM E D+ W
Sbjct: 387 LCLGR----QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-ERDIVSWT 441
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
+++ GN+ K ++ +D N + + Y + G +D K + M
Sbjct: 442 SMITAYSQIGNI---IKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAM 494
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 189/378 (50%), Gaps = 45/378 (11%)
Query: 144 LKECTKRLDGLVGA-SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA-RMLFDEMSNR 201
L+ C R L GA +++G++V G+ VF+QN+++ + +CG ++ A R+L ++
Sbjct: 11 LRSCGSR-GALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEP 69
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
+V++ N M+ GY + G L A +LF RM +R++ SWN++++G+ Q R + LE F M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
S P+ T V+ +C LG + + G + D + TALVDM+ +C
Sbjct: 130 RSGDS---LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 322 GCVERA-------------------------YGV------FKEMPKKDTLAWTAMISVFA 350
G V+ A YG+ F++M ++D ++W MI+ +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHVYLVEPH 409
+G +EA EM +GVR + T+ L+ACA + G+ ++R + ++P+
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH----GNVELGEKVA 465
V + +I++ ++ G F EA+R+ S+ + + W L+GG + +VEL ++
Sbjct: 307 V--ASALIELYAKCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSKSVELFNQMR 363
Query: 466 QYLIDLDPLNHAFYVNLC 483
L+ +D A ++ C
Sbjct: 364 AELMAIDQFALATLISGC 381
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 156/379 (41%), Positives = 237/379 (62%), Gaps = 4/379 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D+ NS+I + CG + +A LF++M RDVVSW M+ GY + G++D+A LF M
Sbjct: 252 DLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMP 311
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+R++ S N+++ G+VQ G EAL F +M S + + PD T+ LSA A LG D
Sbjct: 312 ERDVISCNAMMAGYVQNGHLMEALNFFHDMLS---RKELFPDNATLLITLSAIAQLGHFD 368
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G +H Y+ +G +G AL+DMY KCG ++ A VF+++ K W A+I A
Sbjct: 369 EGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLA 428
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
++G G+ AF+ F EME V+P+ +TF+G+L+AC H+GLV++G CF +MR V+ VEP +
Sbjct: 429 IHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKL 488
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+DIL RAG EA++ + MP+EP+ VW LL C+ H N +GE VA++LI
Sbjct: 489 QHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLIS 548
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
+D N + YV L ++YA G ++DV + R +MK+R ++K +PGCS +E++G VHEF ++
Sbjct: 549 VDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKK-IPGCSQIELEGNVHEFFVRD 607
Query: 531 SPKVVKEELVLILNGLSKI 549
E+ +L+ LS +
Sbjct: 608 KSHPQVREIYSMLDSLSAL 626
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 247/481 (51%), Gaps = 53/481 (11%)
Query: 12 LLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF 71
+L S P N LIL + + K + ++ +IH+++I + + ++ SL TR++
Sbjct: 1 MLISATSNQPWNSTHPTLIL---LPKSKTLHDVNQIHSRLITTGFI---NNPSLTTRIIL 54
Query: 72 -FCALSVSGSLSYATNVF-------SHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
F + S + +A +F H K+ + + +N +I+ S ++ +
Sbjct: 55 NFSSSSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIK------SFSHGEDPREAFV 108
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLV--GASVYGQVVKFGVCDDVFVQNSVISL 181
++ ML G+ D +F +LK C++ GL+ G ++G + + + DVF+QN ++ L
Sbjct: 109 IFNLMLENGVCVDKFSFSLVLKACSRL--GLIKEGMQIHGLLGRMEIGSDVFLQNCLMCL 166
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFR--RMKKRNIFSWNS 239
++ CG + AR LFD M RD VS+N+MI GY++ G + A +LF M+++N+ SWNS
Sbjct: 167 YLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNS 226
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I+G+ R+ E L + E+ EEM K D I+ S++ C G +++ + +
Sbjct: 227 MISGY---ARSEEGLRVAWEL----FEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQM 279
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
+ DVV +VD Y K G ++ A G+F EMP++D ++ AM++ + NG+ EA
Sbjct: 280 PKR----DVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEAL 335
Query: 360 DTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA---- 414
+ F +M + + P++ T + LSA A G ++G + H Y +E + + +
Sbjct: 336 NFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEG-----VALHCY-IEDNGFSLSEKLG 389
Query: 415 -CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP 473
+ID+ ++ G A + + + + W A++GG +HG LGE + ++++
Sbjct: 390 VALIDMYAKCGSIDNALSVFEDID-DKSIDHWNAIIGGLAIHG---LGEVAFELFMEMEK 445
Query: 474 L 474
L
Sbjct: 446 L 446
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 45/281 (16%)
Query: 227 RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
+ K+ N F WN+II F G REA +F M +E V DK + + VL AC+ L
Sbjct: 80 KHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLM----LENGVCVDKFSFSLVLKACSRL 135
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
G I G +HG L R + DV + L+ +Y +CGC+ A +F M K+D++++ +MI
Sbjct: 136 GLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMI 195
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
+ +G K A + F M E + N +++ ++S A S E+G
Sbjct: 196 DGYVKHGMVKSARELFDVMPME--QKNLISWNSMISGYARS---EEG------------- 237
Query: 407 EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
A L MP + D+ W +++ GC G +E +
Sbjct: 238 -------------------LRVAWELFEEMP-KRDLISWNSMIDGCVKCGKMENAHHLFN 277
Query: 467 YLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+ D ++ + N+ D YAK G D + + M ER +
Sbjct: 278 QMPKRDVVS---WANMVDGYAKLGEIDIARGLFDEMPERDV 315
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 269/496 (54%), Gaps = 44/496 (8%)
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
H +++ + G + A +F I D+ ++N MI A ET + +
Sbjct: 197 HRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYA----ETGNYK--EA 250
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L+L+K+M+ T I PD T ++ C + +G V+ + G ++ + NS++ L
Sbjct: 251 LELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDL 310
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG +L+ A LF + +++ SWN++I
Sbjct: 311 YSKCG-------------------------------ELETACGLFEGLLYKDVISWNTLI 339
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL-- 299
G+ +EAL LFQEM S +P+ +T+ S+L ACA+LGAID G+W+H Y+
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGE----RPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
R + T+L+DMY KCG +E A+ VF + K +W AMI FA++G AF
Sbjct: 396 RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAF 455
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
D F M G+ P+ +TFVGLLSAC+ SG+++ GR F M Y + P + HY CMID+
Sbjct: 456 DIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDL 515
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFY 479
L +GLF EAE +I +M MEPD +W +LL C++ GNVELGE AQ LI ++P N Y
Sbjct: 516 LGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCY 575
Query: 480 VNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEEL 539
V L ++YA AGR+++V K R L+ ++G++K VPGCSS+E+D VVHEF + E+
Sbjct: 576 VLLSNIYATAGRWNEVAKIRALLNDKGMKK-VPGCSSIEIDSVVHEFIIGDKFHPRNREI 634
Query: 540 VLILNGLSKIMKNGGF 555
+L + +++ GF
Sbjct: 635 YGMLEEMEVLLEKAGF 650
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 159/489 (32%), Positives = 260/489 (53%), Gaps = 19/489 (3%)
Query: 9 SYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITR 68
SY P+ PP + + CK ++ L+ IH Q+IK+ TN +++
Sbjct: 14 SYPFHFLPSSSDPPYDSLRNHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTN---YALSK 70
Query: 69 LLFFCALSVS-GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQ 127
LL C +S L YA +VF I+ +L +N M R +A S + LKLY
Sbjct: 71 LLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVS------ALKLYVC 124
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
M+ G+ P+ TFPFLLK C K G ++G V+K G D+FV S+IS+++ G
Sbjct: 125 MISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGR 184
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+ AR +FD +RDVVS+ A+I GY G ++ A LF + +++ SWN++I+G+ +
Sbjct: 185 LEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAET 244
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
G +EALELF+EM ++ ++PD+ T+ +V+SACA G+I+ G+ VH ++ G +
Sbjct: 245 GNYKEALELFKEMMKTN----IRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSN 300
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+ I +L+D+Y KCG +E A G+F+ + KD ++W +I + KEA F+EM
Sbjct: 301 LKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLF 426
G RPN VT + +L ACAH G ++ GRW V + + + +ID+ ++ G
Sbjct: 361 SGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDI 420
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL--IDLDPLNHAFYVNLCD 484
A ++ S+ + + W A++ G MHG + + + I ++P + F V L
Sbjct: 421 EAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITF-VGLLS 478
Query: 485 MYAKAGRFD 493
+++G D
Sbjct: 479 ACSRSGMLD 487
>gi|225437286|ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 179/499 (35%), Positives = 274/499 (54%), Gaps = 50/499 (10%)
Query: 23 NKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS 82
N TK + N + C + + +I Q+I N H + F A G L
Sbjct: 8 NPRVTKFL--NLLTNCCSPCHIHQIQAQLIVQ-----NLHSNTTIAHHFITACQSLGLLD 60
Query: 83 YATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPF 142
A +F+H + ++ N +IRA S + H+ +Y M I P+ TFPF
Sbjct: 61 SALLLFTHHSKPHVFICNSLIRA----FSHNHTPHTP--FSIYTHMHSNSILPNNFTFPF 114
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
LLK G ++ VVK G DD++VQNS+++++ +CG
Sbjct: 115 LLKSLADFKGLSEGQCIHTHVVKLGQFDDIYVQNSLLNVYASCG---------------- 158
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
D+ + + +F M R++ SW +ITG+ R +AL F++MQ
Sbjct: 159 ---------------DMGLCMRVFDEMPHRDVVSWTVLITGYRSAERYDDALIAFEQMQY 203
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
+ V P+ +T+ + LSACA GA++ G W+H ++RRSG + DV++GT+L+DMYGKCG
Sbjct: 204 AGV----VPNHVTMVNALSACADFGALEMGVWIHEFIRRSGWEFDVILGTSLIDMYGKCG 259
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
+E VF+ M +K+ W ++I AL G EA F ME EG++ + VT + +L
Sbjct: 260 RIEEGLVVFRSMKEKNVFTWNSLIKGLALARSGAEAVWWFYRMEQEGIKADEVTLIAVLC 319
Query: 383 ACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
AC+HSG+V+ GR F +M Y P V HYAC+ID+L+RAG+ EA ++ MP EP+
Sbjct: 320 ACSHSGMVQMGRQIFGSLMNGKYEFFPGVKHYACVIDLLARAGILQEAMEVMTRMPFEPN 379
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+WGA L GC+ HG++EL E A+ L++L+P N A+YV L ++YA+ GR+ DV+K R L
Sbjct: 380 KVMWGAFLAGCRAHGDLELSEFAARKLVELEPGNGAYYVLLSNIYAEMGRWSDVEKVRRL 439
Query: 502 MKERGIRKEVPGCSSVEVD 520
MKE G+ K++ GCSS+E++
Sbjct: 440 MKEGGLTKDL-GCSSIELE 457
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 153/377 (40%), Gaps = 56/377 (14%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PN + +L++ D K + E + IHT ++K Q +D + + L + + G +
Sbjct: 107 PNNFTFPFLLKSLAD-FKGLSEGQCIHTHVVKLG--QFDDIYVQNSLLNVYAS---CGDM 160
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
VF + D+ ++ ++I +S+E D L ++QM G+ P+ +T
Sbjct: 161 GLCMRVFDEMPHRDVVSWTVLI--TGYRSAERYD----DALIAFEQMQYAGVVPNHVTMV 214
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
L C +G ++ + + G DV + S+I ++ CG + ++F M +
Sbjct: 215 NALSACADFGALEMGVWIHEFIRRSGWEFDVILGTSLIDMYGKCGRIEEGLVVFRSMKEK 274
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
+V +WN S+I G EA+ F M+
Sbjct: 275 NVFTWN-------------------------------SLIKGLALARSGAEAVWWFYRME 303
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC--DVVIGTALVDMYG 319
+E +K D++T+ +VL AC++ G + G+ + G L + V ++D+
Sbjct: 304 ----QEGIKADEVTLIAVLCACSHSGMVQMGRQIFGSLMNGKYEFFPGVKHYACVIDLLA 359
Query: 320 KCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
+ G ++ A V MP + + + W A ++ +G F + + P + +
Sbjct: 360 RAGILQEAMEVMTRMPFEPNKVMWGAFLA--GCRAHGDLELSEFAARKLVELEPGNGAYY 417
Query: 379 GLLSACAHSGLVEKGRW 395
LLS E GRW
Sbjct: 418 VLLSNI----YAEMGRW 430
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 258/446 (57%), Gaps = 9/446 (2%)
Query: 85 TNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
NV I++ + T ++ + + + D + + + M GI P+ +TF LL
Sbjct: 16 NNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLL 75
Query: 145 KECTKRLDGLVGAS--VYGQVVKFGVC-DDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
C G S ++G K G+ V V +++ ++ G V AR++FD M ++
Sbjct: 76 SACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDK 135
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
+ V+WN MI GY+R+G +D A+ +F M +R++ SW ++ITGFV+ G EAL F+EMQ
Sbjct: 136 NSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQ 195
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
S V PD + I + L+AC LGA+ G W H Y+ +V + +L+D+Y +C
Sbjct: 196 ISGV----NPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRC 251
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
GCVE A VF M K+ ++W ++I FA NG E+ FR+M+ EG +P+ VTF G L
Sbjct: 252 GCVEFARQVFDTMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGAL 311
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
+AC+H GLVE+G F MM+ Y + P + H+ C++D+ SRAG +A +++ SMPM+P+
Sbjct: 312 TACSHVGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPN 371
Query: 442 VFVWGALLGGCQMHGN-VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
V G+LL C+ HGN L E++ +++ DLD H+ YV L +MYA G+++ K R
Sbjct: 372 EVVIGSLLAACRNHGNHTILAERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASKMRR 431
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEF 526
MK G++K+ PG SS+E+D H F
Sbjct: 432 KMKGLGLKKQ-PGYSSIEIDDYTHVF 456
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 157/380 (41%), Positives = 237/380 (62%), Gaps = 5/380 (1%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
N++I+ ++ C + AR LF+ M ++V SWN MI GY ++GD+ A + F RM +R+
Sbjct: 220 NAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSI 279
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SW +II G+ Q G EAL LF EM+ + ++ T S LS CA + A++ GK V
Sbjct: 280 SWAAIIAGYAQSGYGEEALHLFVEMKRDGE----RLNRSTFTSTLSTCAEIAALELGKQV 335
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
HG + ++GL+ +G AL+ MY KCG ++ AY VF+ + +K+ ++W MI+ +A +G+G
Sbjct: 336 HGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFG 395
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
KEA F M+ G+ P+ VT VG+LSAC+H+GLV+KG F M Y + + HY C
Sbjct: 396 KEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTC 455
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
MID+L RAG +A+ L+++MP EPD WGALLG ++HGN ELGEK A+ + +++P N
Sbjct: 456 MIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDN 515
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
YV L ++YA +GR+ DV + R M++RG++K VPG S VEV +H F++ S
Sbjct: 516 SGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKK-VPGYSWVEVQNKIHTFTVGDSVHPE 574
Query: 536 KEELVLILNGLSKIMKNGGF 555
++ + L L MK G+
Sbjct: 575 RDRIYTFLEELDLKMKKEGY 594
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 177/398 (44%), Gaps = 75/398 (18%)
Query: 169 CDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRR 228
C + N +++ ++ G + AR LF+ ++ +++SWN M+ GY++ L A +F R
Sbjct: 89 CKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDR 148
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
M +R+ SWN++I+G+ Q G EA LF+E S V D T +++S G
Sbjct: 149 MPERDEVSWNTMISGYAQNGELLEAQRLFEE---SPVR-----DVFTWTAMVSGYVQNGM 200
Query: 289 IDHGK-------------W---VHGYLRRSGLD----------C-DVVIGTALVDMYGKC 321
+D + W + GY++ +D C +V ++ Y +
Sbjct: 201 LDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQN 260
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + +A F MP++D+++W A+I+ +A +GYG+EA F EM+ +G R N TF L
Sbjct: 261 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 320
Query: 382 SACAHSGLVEKGRW-------------CFV------------MMRHVYLV-----EPHVY 411
S CA +E G+ C+V + Y+V E V
Sbjct: 321 STCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVV 380
Query: 412 HYACMIDILSRAGLFSEAERLIRSMP---MEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ MI +R G EA L SM + PD +L C G V+ G + Y
Sbjct: 381 SWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYF-YS 439
Query: 469 IDLD---PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+ D N Y + D+ +AGR DD + NLMK
Sbjct: 440 MTQDYGITANSKHYTCMIDLLGRAGRLDDAQ---NLMK 474
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 159/364 (43%), Gaps = 64/364 (17%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+CK M + +E+ + PC + +++IT + +G ++ A N F + + D
Sbjct: 228 QCKRMDQARELFEAM---PCQNVSSWNTMIT------GYAQNGDIAQARNFFDRMPQRDS 278
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
++ +I A + + L L+ +M G + TF L C + +G
Sbjct: 279 ISWAAIIAGYA------QSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG 332
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
V+G+VVK G+ +V N+++ ++ CG + A ++F+ + ++VVSWN MI GY R
Sbjct: 333 KQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARH 392
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G AL LF MKK I PD +T+
Sbjct: 393 GFGKEALMLFESMKKTGIL-----------------------------------PDDVTM 417
Query: 277 ASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
VLSAC++ G +D G ++ + + G+ + T ++D+ G+ G ++ A + K MP
Sbjct: 418 VGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP 477
Query: 336 -KKDTLAWTAMISVFALNG---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+ D W A++ ++G G++A EME P++ LLS
Sbjct: 478 FEPDAATWGALLGASRIHGNTELGEKAAKMIFEME-----PDNSGMYVLLSNL----YAA 528
Query: 392 KGRW 395
GRW
Sbjct: 529 SGRW 532
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 277/468 (59%), Gaps = 11/468 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G L +A +F D+ T+ MI A + + + L+ ML + + P+
Sbjct: 200 TGCLGFARQMFDESSVKDVVTWTTMINGYA------RNNWLDEAIALFNSMLSSDVKPNE 253
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T LL C+++ D +G +++ + + + + + N+++ +++ CG +T+AR +F+
Sbjct: 254 VTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNN 313
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M RDV SW +++ GY ++GDL A LF M +RNI SWN++I G+ Q + EALELF
Sbjct: 314 MERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELF 373
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH-GYLRRSGLDCDVVIGTALVD 316
M V +V P + T+ VLSA LG ++ G+ +H ++ + G+ +++ A++D
Sbjct: 374 HNM--VDVVGLV-PTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMD 430
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG ++ A +F MP+K+ ++W +MIS +A G+ K+A F +M G++P+H+T
Sbjct: 431 MYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHIT 490
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
F+G+LSAC++ G V +G+ F M + + VEP HYACM+D+LSR GL EA LI M
Sbjct: 491 FIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRM 550
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
PME WGALL C+ HGNVE+ + + L++LDP + Y L ++ A ++ DV+
Sbjct: 551 PMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVR 610
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
R +M+ERG++K VPG S +E++G HEF + + E+ ++N
Sbjct: 611 MVRRMMRERGVKK-VPGHSLIEIEGKFHEFLVADTSHTRSSEIYRVVN 657
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 217/465 (46%), Gaps = 81/465 (17%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATN 86
T LIL++ C +M +LK+I I C + +RLL FCALS SG + YA
Sbjct: 55 TLLILQS----CSSMFQLKQIQAHIT---CTGLMNQIFPASRLLAFCALSDSGDIHYAHL 107
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
+F + + + +N MI+ CK++ H ++QM+ D +F F LK
Sbjct: 108 IFDQTELPNCFFWNTMIKG-YCKAN-----HPSMGFSFFRQMIRNRAEFDSGSFVFALKA 161
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
C + + +VG +V+ + K G D+FVQN +I ++ G + AR +FDE S +DVV+W
Sbjct: 162 CGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTW 221
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
MI GY R+ LD EA+ LF M SS
Sbjct: 222 TTMINGYARNNWLD-------------------------------EAIALFNSMLSSD-- 248
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
VKP+++T+ ++LSAC+ G + GK +H ++RR + C + + A++DMY KCGC+
Sbjct: 249 --VKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTT 306
Query: 327 AYGVFK-------------------------------EMPKKDTLAWTAMISVFALNGYG 355
A +F EMP+++ ++W AMI+ ++ N
Sbjct: 307 AREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQP 366
Query: 356 KEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
EA + F M + G+ P T V +LSA G +E G+ + ++ +
Sbjct: 367 MEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKN 426
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
++D+ ++ G A +L SMP E ++ W +++ +G+ +
Sbjct: 427 AVMDMYAKCGSIDAAAKLFHSMP-EKNLVSWNSMISAYASYGHAK 470
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 10/251 (3%)
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
SGD+ A +F + + N F WN++I G+ + F++M + + D +
Sbjct: 99 SGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQM----IRNRAEFDSGS 154
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
L AC G VH + + G D D+ + L+ Y + GC+ A +F E
Sbjct: 155 FVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESS 214
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
KD + WT MI+ +A N + EA F M + V+PN VT + LLSAC+ G E G+
Sbjct: 215 VKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGK- 273
Query: 396 CFVMMRHVYL--VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
+ H+ + + M+D+ + G + A + +M DVF W +LL G
Sbjct: 274 --TLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERR-DVFSWTSLLNGYA 330
Query: 454 MHGNVELGEKV 464
+G++ K+
Sbjct: 331 KNGDLGSARKL 341
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 162/387 (41%), Positives = 244/387 (63%), Gaps = 9/387 (2%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DVF+ N +++ ++A G V AR +FD MS RD+VSWN MI GY GD+ +A ++F +
Sbjct: 115 DVFLCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTR 174
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
R+ FSW+S+I+ + +G ++EALEL++EM+ + V PD I++ SVLSAC+ +GA+
Sbjct: 175 DRDAFSWSSMISAYAKGRCSKEALELWREMRVAGV----APDCISMVSVLSACSAMGALA 230
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G VH ++ + ++ D+ +GTALVDMY KCG +E + VF MP KD L W++MI A
Sbjct: 231 IGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLA 290
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
+G G +A F EM ++G++PN +TF+G+L AC H GLV G+ F M V+ V P +
Sbjct: 291 NHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRM 350
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+D+L RAG EA LIRSM +PD +W LLG C++H NVE+ E+ L
Sbjct: 351 EHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKV 410
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF--SM 528
LDPL YV L ++YA+A ++ V + R ++ I++ VPG SS+E + VHEF
Sbjct: 411 LDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQR-VPGRSSIEWENTVHEFVSGD 469
Query: 529 KGSPKVVKEELVLILNGLSKIMKNGGF 555
+ P++ EE+ +L + ++ G+
Sbjct: 470 RSHPRI--EEIYKMLEEMMDRLRQAGY 494
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 65/284 (22%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC----LKLYKQMLCT 131
+V G + A +F + D ++++ MI A A G+C L+L+++M
Sbjct: 158 AVRGDVGMAREIFDGTRDRDAFSWSSMISAYA----------KGRCSKEALELWREMRVA 207
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
G++PDC++ +L C+ +GA V+ V V D+ + +++ ++ CG + ++
Sbjct: 208 GVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENS 267
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
+F M +DV++W++MII G G
Sbjct: 268 LKVFHAMPVKDVLTWSSMII-------------------------------GLANHGLGH 296
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW-------VHGYL-RRSG 303
+AL LF EM + + ++P++IT VL AC ++G ++ GK VHG + R
Sbjct: 297 DALSLFSEM----ISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEH 352
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
C +VD+ G+ G VE A + + M K D + W ++
Sbjct: 353 YGC-------MVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLL 389
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 169/469 (36%), Positives = 262/469 (55%), Gaps = 44/469 (9%)
Query: 60 NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
+ H +++ + G ++ A +F I D+ ++N MI A ET + +
Sbjct: 164 SSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYA----ETGN--NK 217
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L+L+K+M+ T + PD T ++ C + +G V+ + G ++ + N++I
Sbjct: 218 EALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALI 277
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
L++ C G+++ A LF + +++ SWN+
Sbjct: 278 DLYIKC-------------------------------GEVETACGLFEGLSYKDVISWNT 306
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I G+ +EAL LFQEM S P+ +T+ S+L ACA+LGAI+ G+W+H Y+
Sbjct: 307 LIGGYTHMNLYKEALLLFQEMLRSGE----SPNDVTMLSILPACAHLGAIEIGRWIHVYI 362
Query: 300 --RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
R G+ T+L+DMY KCG +E A VF + + +W AMI FA++G
Sbjct: 363 NKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANA 422
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
AFD F M + P+ +TFVGLLSAC+HSG+++ GR F M+ Y + P + HY CMI
Sbjct: 423 AFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMI 482
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L +GLF EAE +I +M MEPD +W +LL C+M+ NVELGE AQ LI ++P N
Sbjct: 483 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPG 542
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L ++YA AGR+++V K R L+ ++G++K VPGCSS+E+D VVHEF
Sbjct: 543 SYVLLSNIYATAGRWNEVAKIRALLNDKGMKK-VPGCSSIEIDSVVHEF 590
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 240/424 (56%), Gaps = 16/424 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS-GSLSYATNVFSHIKR 93
+ CK ++ L+ IH Q+IK+ TN +++L+ FC LS L YA +VF I+
Sbjct: 9 LHNCKTLQSLRMIHAQMIKTGLHNTN---YALSKLIEFCVLSPHFDGLPYAISVFETIQE 65
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+L +N M R +A S + L LY M+ G+ P+C TFPFLLK C K
Sbjct: 66 PNLLIWNTMFRGHALSSDPVS------ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAF 119
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G ++G V+K G D++V S+IS+++ G + AR +FD+ S+RDVVS+ A+I GY
Sbjct: 120 REGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGY 179
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
G + A +F + +++ SWN++I+G+ + G +EALELF+EM ++ V+PD+
Sbjct: 180 ASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN----VRPDE 235
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
T+ SV+SACA +I+ G+ VH ++ G ++ I AL+D+Y KCG VE A G+F+
Sbjct: 236 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 295
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
+ KD ++W +I + KEA F+EM G PN VT + +L ACAH G +E G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 355
Query: 394 RWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
RW V + + + V H +ID+ ++ G A+++ S+ + + W A++ G
Sbjct: 356 RWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGF 414
Query: 453 QMHG 456
MHG
Sbjct: 415 AMHG 418
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 299/528 (56%), Gaps = 26/528 (4%)
Query: 45 KEIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMI 103
K++H ++I+S P + +LI L C GS A VF+ ++ + ++ ++I
Sbjct: 280 KQLHAKVIRSLPQIDPYVASALI-ELYAKC-----GSFKEAKRVFNSLQDRNSVSWTVLI 333
Query: 104 RAN---ACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+ C S K ++L+ QM ++ D L+ C R+D +G ++
Sbjct: 334 GGSLQYECFS---------KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 384
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+K G + V NS+ISL+ CG + +A +F MS RD+VSW +MI Y + G++
Sbjct: 385 SLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII 444
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A + F M RN +WN+++ ++Q G + L+++ M S ++ V PD +T ++
Sbjct: 445 KAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS---QKDVTPDWVTYVTLF 501
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
CA +GA G + G+ ++GL +V + A + MY KCG + A +F + KD +
Sbjct: 502 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVV 561
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+W AMI+ ++ +G GK+A TF +M ++G +P+++++V +LS C+HSGLV++G+ F MM
Sbjct: 562 SWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 621
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
V+ + P + H++CM+D+L RAG +EA+ LI MPM+P VWGALL C++HGN EL
Sbjct: 622 TRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDEL 681
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
E A+++ +LD + Y+ L +Y+ AG+ DD + R LM+++GI+K PG S +EV+
Sbjct: 682 AELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKN-PGYSWMEVE 740
Query: 521 GVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSMEAQV 568
VH F + V +++ I N + ++M+ Y+R S +++
Sbjct: 741 NKVHVFK---ADDVSHPQVIAIRNKMDELMEKIAHLGYVRTESPRSEI 785
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 188/431 (43%), Gaps = 51/431 (11%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L +A C + + + + IK P ++IT + + GSLS A +F
Sbjct: 61 LLHAYLSCGALSDARRLLRADIKEP--------NVITHNIMMNGYAKQGSLSDAEELFDR 112
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
+ R D+ ++N ++ + + + C +L Q+L
Sbjct: 113 MPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLL--------------------- 151
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
G KF D V+ +++ +F+ CG+V A LF ++ + N+M+
Sbjct: 152 ----------GLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY + +D A++ F M +R++ SWN +I Q GR REAL L EM + V+
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH----RKGVR 257
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
D T S L+ACA L ++ GK +H + RS D + +AL+++Y KCG + A V
Sbjct: 258 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 317
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F + +++++WT +I ++ + F +M AE + + L+S C + +
Sbjct: 318 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 377
Query: 391 EKGRWCFVMMRHVYLVEPH---VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GR + + L H + +I + ++ G AE + SM E D+ W +
Sbjct: 378 CLGR----QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-ERDIVSWTS 432
Query: 448 LLGGCQMHGNV 458
++ GN+
Sbjct: 433 MITAYSQIGNI 443
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 177/378 (46%), Gaps = 71/378 (18%)
Query: 144 LKECTKRLDGLVGA-SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA-RMLFDEMSNR 201
L+ C R L GA +++G++V G+ VF+QN+++ +++CG ++ A R+L ++
Sbjct: 27 LRSCGSR-GALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 85
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
+V++ N M+ GY + G L A +LF RM +R++ SWN++++
Sbjct: 86 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMS------------------- 126
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
D A +C LG + + G + D + TALVDM+ +C
Sbjct: 127 ----------DTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 176
Query: 322 GCVERA-------------------------YGV------FKEMPKKDTLAWTAMISVFA 350
G V+ A YG+ F++M ++D ++W MI+ +
Sbjct: 177 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 236
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHVYLVEPH 409
+G +EA EM +GVR + T+ L+ACA + G+ ++R + ++P+
Sbjct: 237 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 296
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH----GNVELGEKVA 465
V + +I++ ++ G F EA+R+ S+ + + W L+GG + +VEL ++
Sbjct: 297 V--ASALIELYAKCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSKSVELFNQMR 353
Query: 466 QYLIDLDPLNHAFYVNLC 483
L+ +D A ++ C
Sbjct: 354 AELMAIDQFALATLISGC 371
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 262/440 (59%), Gaps = 9/440 (2%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
K + ++++M +G+ P+ +T +L C + D G ++G V+ G+ ++FV ++++
Sbjct: 248 KGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALV 307
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI----F 235
SL+ C V ARM+FD M +RDVVSWN ++ Y ++ + + LF +M + +
Sbjct: 308 SLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEA 367
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
+WN++I G ++ GR+ EA+E+F++MQ KP++ITI+S+L AC++ + GK +
Sbjct: 368 TWNAVIGGCMENGRSEEAVEMFRKMQKMGF----KPNEITISSILPACSFSENLRMGKEI 423
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H Y+ R D+ TAL+ MY KCG + + VF M +KD +AW MI A++G G
Sbjct: 424 HCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNG 483
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
KEA F +M V+PN VTF G+LS C+HS LVE+G F M +LVEP HY+C
Sbjct: 484 KEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSC 543
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
++DI SRAG +EA + I+ MPMEP WGALL C+++ NVEL + A+ L +++P N
Sbjct: 544 VVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNN 603
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
YV+L ++ A + + + R LMKERGI K PGCS ++V VH F + +
Sbjct: 604 PGNYVSLFNILVTAKMWSEASQVRILMKERGITK-TPGCSWLQVGNKVHTFVVGDKSNIE 662
Query: 536 KEELVLILNGLSKIMKNGGF 555
+++ L+ L + MK G+
Sbjct: 663 SDKIYNFLDELVEKMKMAGY 682
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 208/484 (42%), Gaps = 91/484 (18%)
Query: 47 IHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRAN 106
+ T+ + P L TN L RL+ AL+V G + A +F +I + D T + +I
Sbjct: 82 LSTEAMVPPSLPTNIPSHLGLRLIR-VALNV-GDFNRARQLFDNIPQPDPTTCSTLI--- 136
Query: 107 ACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKF 166
S+ T S + +K+Y + GI PD F K C D L V+ +
Sbjct: 137 ---SALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRC 193
Query: 167 GVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLF 226
GV DVFV N++I + C V AR +FD++ RDVVSW ++ Y++ G +D+F
Sbjct: 194 GVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVF 253
Query: 227 RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
R M W+ VKP+ +T++S+L ACA L
Sbjct: 254 REM------GWSG-----------------------------VKPNPMTVSSILPACAEL 278
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
+ GK +HG+ R G+ ++ + +ALV +Y KC V A VF MP +D ++W ++
Sbjct: 279 KDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVL 338
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
+ + N ++ F F +M +GVR + T+ ++ C +G E+
Sbjct: 339 TAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEA------------- 385
Query: 407 EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
E R ++ M +P+ ++L C N+ +G+++
Sbjct: 386 --------------------VEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHC 425
Query: 467 YLI------DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
Y+ DL Y MYAK G + + ++M+ RK+V +++ +
Sbjct: 426 YVFRHWKVGDLTSTTALLY-----MYAKCGDLNLSRNVFDMMR----RKDVVAWNTMIIA 476
Query: 521 GVVH 524
+H
Sbjct: 477 NAMH 480
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 148/362 (40%), Gaps = 82/362 (22%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG-- 79
PN + IL A E K+++ KEIH ++ H ++ L F C+ VS
Sbjct: 263 PNPMTVSSILP-ACAELKDLKSGKEIHGFAVR---------HGMVVNL-FVCSALVSLYA 311
Query: 80 ---SLSYATNVFSHIKRSDLYTYNIMIRA-----------------------------NA 107
S+ A VF + D+ ++N ++ A NA
Sbjct: 312 KCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNA 371
Query: 108 CKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG 167
+ S + ++++++M G P+ +T +L C+ + +G ++ V +
Sbjct: 372 VIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHW 431
Query: 168 VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFR 227
D+ +++ ++ CG + +R +FD M +DVV+WN MII G+
Sbjct: 432 KVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGN--------- 482
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG 287
+EAL LF +M S V+ P+ +T VLS C++
Sbjct: 483 ----------------------GKEALFLFDKMLLSRVQ----PNSVTFTGVLSGCSHSR 516
Query: 288 AIDHGKWVHGYLRRSGL-DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL-AWTAM 345
++ G + + R L + D + +VD+Y + G + AY + MP + T AW A+
Sbjct: 517 LVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGAL 576
Query: 346 IS 347
++
Sbjct: 577 LA 578
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/425 (39%), Positives = 257/425 (60%), Gaps = 24/425 (5%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECTK-RLDGL-VGASVYGQVVKFGV-CDDVFVQNSVISL 181
+ +M G+ P+ +TF LL CT L+GL G S++ V K G+ ++V V +++ +
Sbjct: 77 FSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDM 136
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG + A ++FDEM R+ VSWN MI G +R+G++ A+ LF +M +R+ SW S+I
Sbjct: 137 YSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMI 196
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
GFV+ G +ALE F+EMQ + VE PD +TI SVL+ACA LGA+ G W++ ++ +
Sbjct: 197 GGFVKKGCFEQALEWFREMQLAGVE----PDYVTIISVLAACANLGALGLGLWINRFVMK 252
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
++ I +L+DMY +CGC+ A VF++MPK+ ++W +MI FALNG+ +EA +
Sbjct: 253 QDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEF 312
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F M EG HSGLV++G F +M+ + P + HY C++D+ S
Sbjct: 313 FNLMRKEG----------------HSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYS 356
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
RAG +A +I +MPM+P+ V G+LL C+ HG+V L E++ +YL ++DP + + YV
Sbjct: 357 RAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVL 416
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
L ++YA GR+D K R MK GI K+ PG SS+E+DG +HEF V + +
Sbjct: 417 LSNIYAAVGRWDGASKVRKKMKALGIHKK-PGFSSIEMDGSIHEFVAGDKTHVETQNIYA 475
Query: 542 ILNGL 546
+L+ L
Sbjct: 476 MLDHL 480
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL--VEK 392
P ++WT+ I++ NG EA F M+ GVRPNH+TF+ LLSAC L +
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRF 109
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G +R + L +V ++D+ S+ G A + M + V W ++ GC
Sbjct: 110 GGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSV-SWNTMIDGC 168
Query: 453 QMHGNVELGEKVAQY 467
+G E+GE + +
Sbjct: 169 MRNG--EVGEAIVLF 181
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/492 (36%), Positives = 281/492 (57%), Gaps = 20/492 (4%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C + L++ HT I+K Q + + ++R + A S SY+ F+H + ++
Sbjct: 23 CTTLTHLQQTHTFILKHALFQNDIN---LSRFIHKTASLNYPSYSYSIFTFNHNRPFPIF 79
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
YN +I A +++ + +++ + G+S D + P++LK D +G
Sbjct: 80 VYNNIIYA-------LYSSNAKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGK 132
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++ V G+ +V V +S+I ++ +C V SAR LFDE V NAMI+ Y++ G
Sbjct: 133 QIHCVGVVTGLDKNVSVCSSLIQMY-SCYDVCSARKLFDEFGGNGCV-LNAMIVAYVKVG 190
Query: 218 DLDVALDLFRRMKKRN--IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
D+ A LF M +R+ +FSW ++I+G+ Q EA++LF+ MQ E VKPD+I
Sbjct: 191 DVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQL----ENVKPDEIA 246
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
I +VLSACA LGA+ G+W+H Y+ + L V + +L+DMY K G + +A +F+ M
Sbjct: 247 ILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMK 306
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLVEKGR 394
K + WT MI+ AL+G GKEA F ME E V+PN VTF+ +LSAC+H GLVE GR
Sbjct: 307 HKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGR 366
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F MR Y +EP + HY CMID+L RAG EA+ ++ MP E + +WG+LL
Sbjct: 367 DYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTR 426
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
G+ EL E+ ++L L+P + Y L + YA GR+++ + R +M++ G+ K VPG
Sbjct: 427 CGDAELAEEALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEK-VPGV 485
Query: 515 SSVEVDGVVHEF 526
S +EV+ +V+EF
Sbjct: 486 SFIEVNNIVYEF 497
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 277/484 (57%), Gaps = 21/484 (4%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC---LKLYKQMLCTGISP 135
G ++ A +VF + +N MI + SG C +L+++M+ +
Sbjct: 248 GDVNAARSVFEEVDGKFDVVWNAMI---------SGYVQSGMCADAFELFRRMVSEKVPL 298
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVK----FGVCDDVFVQNSVISLFMACGFVTSA 191
D TF +L C + G SV+GQ+++ F + V N++++L+ G + A
Sbjct: 299 DEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIA 358
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
+ +FD M+ +DVVSWN ++ GY+ SG LD A+++F+ M +N SW +++G+V GG +
Sbjct: 359 KRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSE 418
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
+AL+LF +M++ E VKP T A ++AC LGA+ HG+ +H +L + G + G
Sbjct: 419 DALKLFNQMRA----EDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAG 474
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
AL+ MY KCG V A VF MP D+++W AMIS +G+G+EA + F +M AEG+
Sbjct: 475 NALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGID 534
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ ++F+ +L+AC H+GLV++G F M+ + + P HYA +ID+L R+G EA
Sbjct: 535 PDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARD 594
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
LI++MP EP +W A+L GC+ +G++E G A L + P + Y+ L + Y+ AGR
Sbjct: 595 LIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGR 654
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+ D + R LM++RG++KE PGCS +EV +H F + + +E+ L + M+
Sbjct: 655 WVDAARVRKLMRDRGVKKE-PGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMR 713
Query: 552 NGGF 555
G+
Sbjct: 714 KLGY 717
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 136/524 (25%), Positives = 228/524 (43%), Gaps = 96/524 (18%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS------------------------ 76
+R L+ +H +++ + L H L RL+ LS
Sbjct: 41 LRALRCLHARLLTADLLHAPSHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSL 100
Query: 77 -----VSGSLSYATNVFSHIK--RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
+G L A F + R D +N M+ A A S + + ++ +L
Sbjct: 101 VAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASL------AAPAVSVFHALL 154
Query: 130 CTG-ISPDCLTFPFLLKECTK--RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
+G + PD +F L+ + L ++ V+K G + V N++I+L+M C
Sbjct: 155 GSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCD 214
Query: 187 FVTS---ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
+ AR + DEM ++D ++W M++GY+R GD++ A +F + + WN++I+G
Sbjct: 215 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISG 274
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
+VQ G +A ELF+ M V E V D+ T SVLSACA G HGK VHG + R
Sbjct: 275 YVQSGMCADAFELFRRM----VSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQ 330
Query: 304 ----LDCDVVIGTALVDMYGK-------------------------------CGCVERAY 328
+ + + ALV +Y K GC+++A
Sbjct: 331 PNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAV 390
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VFK MP K+ L+W M+S + G ++A F +M AE V+P T+ G ++AC G
Sbjct: 391 EVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELG 450
Query: 389 LVEKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
++ GR H +LV E ++ + ++ G ++A + MP D
Sbjct: 451 ALKHGR-----QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP-NLDSVS 504
Query: 445 WGALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLCD 484
W A++ HG+ +EL +++ ID D ++ + C+
Sbjct: 505 WNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN 548
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 274/480 (57%), Gaps = 13/480 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS A VF +K+ D+ ++N+MI C + D H + L+LY+++ G
Sbjct: 256 GSSHEAREVFDKMKKRDMVSWNVMI---GCYV-QNGDFH--EALELYQKLDMEGFKRTKA 309
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +L C+ G V+ +++ G+ +V V ++++++ CG + AR +F+ M
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAM 369
Query: 199 SNRDVVSWNAMIIGYLRSG---DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
NRD V+W+ +I Y +G D A +F R+ R+ WN++IT +VQ G A A++
Sbjct: 370 KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMK 429
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
+F+EM ++ +KPD +T +VL ACA LG + K +H + S L+ +VV+ L+
Sbjct: 430 IFREMTGAA---GLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLI 486
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
+MY +CG +E A +F +K ++WTAM++ F+ G EA D F+EM+ EGV+P+ V
Sbjct: 487 NMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDV 546
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
T+ +L C H G +E+G F M ++ + P H+A M+D+L R+G +A+ L+ S
Sbjct: 547 TYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLES 606
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP EPD W L C++HG +ELGE A+ + +LDP + A Y+ + ++YA G ++ V
Sbjct: 607 MPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKV 666
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R M+ERG++K +PG S +EVDG +HEFS G +E+ L L +M+ G+
Sbjct: 667 ASVRKKMEERGLKK-LPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGY 725
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 211/454 (46%), Gaps = 84/454 (18%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C ++ + +EIH ++ S + SL L+ A GS+ A +F ++ D
Sbjct: 120 CSSLAQGREIHNRVFYSGL---DSFQSLANALVTMYARF--GSVGDAKRMFQSLQTRDET 174
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
++N +I A+ S++ D L+++K+M C + P+ T+ ++ + G
Sbjct: 175 SWNAVILAH----SQSGDWSGA--LRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGR 227
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++ ++V G D+ V ++I+++ CG AR +FD+M RD+VSWN MI Y+++G
Sbjct: 228 KIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNG 287
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
D EALEL+Q++ E K K T
Sbjct: 288 DF-------------------------------HEALELYQKLDM----EGFKRTKATFV 312
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
S+L AC+ + A+ G+ VH ++ GLD +V + TALV+MY KCG +E A VF M +
Sbjct: 313 SILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR 372
Query: 338 DTLAWTAMISVFALNGYGKEA------FD----------------------------TFR 363
D +AW+ +I +A NGYGK+A FD FR
Sbjct: 373 DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFR 432
Query: 364 EME-AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
EM A G++P+ VTF+ +L ACA G + + + + L E +V +I++ +R
Sbjct: 433 EMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL-ESNVVVTNTLINMYAR 491
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
G EAERL + E V W A++ +G
Sbjct: 492 CGSLEEAERLF-AAAKEKTVVSWTAMVAAFSQYG 524
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 180/383 (46%), Gaps = 57/383 (14%)
Query: 80 SLSYATNVFSHI--KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SL A +VF + ++ ++ ++N MI A A + HS + L LY +M G+ D
Sbjct: 57 SLVDARSVFESMDWRQRNVVSWNAMIAAYA------QNGHSTEALVLYWRMNLQGLGTDH 110
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+TF +L C+ G ++ +V G+ +S SL
Sbjct: 111 VTFVSVLGACSSLAQG---REIHNRVFYSGL-------DSFQSLA--------------- 145
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
NA++ Y R G + A +F+ ++ R+ SWN++I Q G AL +F
Sbjct: 146 ---------NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIF 196
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+EM+ +KP+ T +V+S + + G+ +H + +G D D+V+ TAL++M
Sbjct: 197 KEMKCD-----MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINM 251
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
YGKCG A VF +M K+D ++W MI + NG EA + +++++ EG + TF
Sbjct: 252 YGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATF 311
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVE----PHVYHYACMIDILSRAGLFSEAERLI 433
V +L AC+ + +GR + H +++E V ++++ ++ G EA ++
Sbjct: 312 VSILGACSSVKALAQGR-----LVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVF 366
Query: 434 RSMPMEPDVFVWGALLGGCQMHG 456
+M D W L+G +G
Sbjct: 367 NAMK-NRDAVAWSTLIGAYASNG 388
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 174/408 (42%), Gaps = 77/408 (18%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
PD +TF +L C+ D G +++ ++ D V N++IS++ C + AR +
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F+ M W ++RN+ SWN++I + Q G + EAL
Sbjct: 65 FESMD------W-----------------------RQRNVVSWNAMIAAYAQNGHSTEAL 95
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
L+ M + D +T SVL AC+ L G+ +H + SGLD + AL
Sbjct: 96 VLYWRMNLQG----LGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANAL 148
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
V MY + G V A +F+ + +D +W A+I + +G A F+EM+ + ++PN
Sbjct: 149 VTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-MKPNS 207
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMM----------------------------RHVY-- 404
T++ ++S + ++ +GR + R V+
Sbjct: 208 TTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDK 267
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME-----PDVFVWGALLGGCQMHGNVE 459
+ + + + MI + G F EA L + + ME FV ++LG C +
Sbjct: 268 MKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFV--SILGACSSVKALA 325
Query: 460 LGEKVAQYLID--LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
G V ++++ LD A L +MYAK G ++ +K N MK R
Sbjct: 326 QGRLVHSHILERGLDS-EVAVATALVNMYAKCGSLEEARKVFNAMKNR 372
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 11/217 (5%)
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
+PD +T +VL +C+ G + G+ +H +R S + D ++G AL+ MYGKC + A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 330 VFKEMP--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF+ M +++ ++W AMI+ +A NG+ EA + M +G+ +HVTFV +L AC+
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYA-CMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+ +GR + R Y A ++ + +R G +A+R+ +S+ D W
Sbjct: 123 --LAQGR--EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTR-DETSWN 177
Query: 447 ALLGGCQMHGNVELGEKVAQYL-IDLDPLNHAFYVNL 482
A++ G+ ++ + + D+ P N Y+N+
Sbjct: 178 AVILAHSQSGDWSGALRIFKEMKCDMKP-NSTTYINV 213
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 274/504 (54%), Gaps = 47/504 (9%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK 92
N + NMR K +H +I++ N+H + T + G L A +F+ +
Sbjct: 203 NLFADTANMRMGKAMHAYVIRN---SNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLT 259
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
+ + ++ MI A +S+ + KL+ +M I P+ +T L+ EC
Sbjct: 260 QKTVVSWTAMI-AGCIRSNRLEEG-----TKLFIRMQEENIFPNEITMLSLIVECGFTGA 313
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
+G ++ +++ G + + +++ ++ C + +AR LFD N
Sbjct: 314 LQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQN------------ 361
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
R++ W ++++ + Q +A LF +M++S V +P
Sbjct: 362 -------------------RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV----RPT 398
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
K+TI S+LS CA GA+D GKWVH Y+ + ++ D ++ TALVDMY KCG + A +F
Sbjct: 399 KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFI 458
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
E +D W A+I+ FA++GYG+EA D F EME +GV+PN +TF+GLL AC+H+GLV +
Sbjct: 459 EAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTE 518
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G+ F M H + + P + HY CM+D+L RAGL EA +I+SMP++P+ VWGAL+ C
Sbjct: 519 GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 578
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
++H N +LGE A L++++P N + V + ++YA A R+ D R MK G++KE P
Sbjct: 579 RLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKE-P 637
Query: 513 GCSSVEVDGVVHEFSM--KGSPKV 534
G S +EV+G VHEF M + P++
Sbjct: 638 GHSVIEVNGTVHEFLMGDQSHPQI 661
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 168/393 (42%), Gaps = 79/393 (20%)
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
P +LK C + +G ++G V+K G+ DVFV N+++ ++ C V AR++
Sbjct: 98 PSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLV------ 151
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
F +M +R++ SW+++I + ALEL +EM
Sbjct: 152 -------------------------FDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM 186
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD--CDVVIGTALVDMY 318
V +P ++ + S+++ A + GK +H Y+ R+ + V TAL+DMY
Sbjct: 187 NFMQV----RPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMY 242
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + A +F + +K ++WTAMI+ + +E F M+ E + PN +T +
Sbjct: 243 AKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITML 302
Query: 379 GLLSACAHSGLVEKGRWCFV-MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
L+ C +G ++ G+ ++R+ + V + ++D+ + A L S
Sbjct: 303 SLIVECGFTGALQLGKQLHAYILRNGFSVSLAL--ATALVDMYGKCSDIRNARALFDS-T 359
Query: 438 MEPDVFVWGALLGG-----------------------------------CQMHGNVELGE 462
DV +W A+L C + G ++LG+
Sbjct: 360 QNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGK 419
Query: 463 KVAQYLIDLDPLNHAFYVN--LCDMYAKAGRFD 493
V Y ID + + +N L DMYAK G +
Sbjct: 420 WVHSY-IDKERVEVDCILNTALVDMYAKCGDIN 451
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 286/522 (54%), Gaps = 47/522 (9%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS-VSGSLSYATNVFSHIKR 93
I +C ++REL +I IKS S + +L+ FC S S+SYA ++F +
Sbjct: 36 ISKCNSLRELMQIQAYAIKSHIEDV----SFVAKLINFCTESPTESSMSYARHLFEAMSE 91
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
D+ +N M R + T+ + L+ ++L GI PD TFP LLK C
Sbjct: 92 PDIVIFNSMARGY------SRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKAL 145
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G ++ +K G+ D+V+V ++I+++ C V SAR +FD
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFD----------------- 188
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
R+ + + +N++ITG+ + R EAL LF+EMQ + +KP++
Sbjct: 189 --------------RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQG----KYLKPNE 230
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
IT+ SVLS+CA LG++D GKW+H Y ++ V + TAL+DM+ KCG ++ A +F++
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEK 290
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M KDT AW+AMI +A +G +++ F M +E V+P+ +TF+GLL+AC+H+G VE+G
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEG 350
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R F M + + P + HY M+D+LSRAG +A I +P+ P +W LL C
Sbjct: 351 RKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS 410
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
H N++L EKV++ + +LD + YV L ++YA+ +++ V R +MK+R K VPG
Sbjct: 411 SHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVK-VPG 469
Query: 514 CSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
CSS+EV+ VVHEF K +L L+ + K +K G+
Sbjct: 470 CSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGY 511
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 286/527 (54%), Gaps = 49/527 (9%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLIT-RLLFFCALSVSGSLSYATNVFSHIKR 93
++ CKN+R L +IH IK D S T +L+ CA+S+S +L YA +
Sbjct: 4 LNSCKNLRALTQIHGLFIKYGV----DTDSYFTGKLILHCAISISDALPYARRLLLCFPE 59
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRLD 152
D + +N ++R SE+++ H+ + ++ +M+ G + PD +F F++K
Sbjct: 60 PDAFMFNTLVRG----YSESDEPHNS--VAVFVEMMRKGFVFPDSFSFAFVIKAVENFRS 113
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA---- 208
G ++ Q +K G+ +FV ++I ++ CG V AR +FDEM ++V+WNA
Sbjct: 114 LRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA 173
Query: 209 ---------------------------MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
M+ GY+++G+L+ A +F M R+ SW+++I
Sbjct: 174 CFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMI 233
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
G G E+ F+E+Q + + P+++++ VLSAC+ G+ + GK +HG++ +
Sbjct: 234 VGIAHNGSFNESFLYFRELQRAGM----SPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 289
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL-AWTAMISVFALNGYGKEAFD 360
+G V + AL+DMY +CG V A VF+ M +K + +WT+MI+ A++G G+EA
Sbjct: 290 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 349
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F EM A GV P+ ++F+ LL AC+H+GL+E+G F M+ VY +EP + HY CM+D+
Sbjct: 350 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 409
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
R+G +A I MP+ P VW LLG C HGN+EL E+V Q L +LDP N V
Sbjct: 410 GRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 469
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFS 527
L + YA AG++ DV R M + I+K S VEV +++F+
Sbjct: 470 LLSNAYATAGKWKDVASIRKSMIVQRIKK-TTAWSLVEVGKTMYKFT 515
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 189/518 (36%), Positives = 289/518 (55%), Gaps = 54/518 (10%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS------LSYATNVFSHIKR 93
N+ LK+IH +I + L +N + +L+ A+S+ G + YA +F+ I +
Sbjct: 13 NVGTLKQIHALMIVNG-LTSN--VGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQ 69
Query: 94 SDLYTYNIMIRANACKSSETND-THSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
D + +N IR SS+++D H+ + LY QM + PD TFPF+LK CTK
Sbjct: 70 PDTFMWNTYIRG----SSQSHDPVHA---VALYAQMDQRSVKPDNFTFPFVLKACTKLFW 122
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
G++V+G+V++ G +V V+N+++ CG + A +FD+ DVV+W+A+I G
Sbjct: 123 VNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAG 182
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIIT------------------------------ 242
Y + GDL VA LF M KR++ SWN +IT
Sbjct: 183 YAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALI 242
Query: 243 -GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG-YLR 300
G+V REALELF EM V E PD++T+ S+LSACA LG ++ G+ VH +
Sbjct: 243 GGYVLRNLNREALELFDEM--CGVGEC--PDEVTMLSLLSACADLGDLESGEKVHAKIIE 298
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
+ ++G ALVDMY KCG + +A VF + KD ++W ++IS A +G+ +E+
Sbjct: 299 MNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLG 358
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
FREM+ V P+ VTFVG+L+AC+H+G V++G F +M++ Y +EP + H C++D+L
Sbjct: 359 LFREMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDML 418
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
RAGL EA I SM +EP+ VW +LLG C++HG+VEL ++ + L+ + YV
Sbjct: 419 GRAGLLKEAFNFIASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYV 478
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
L ++YA G +D + R LM + G+ K G S VE
Sbjct: 479 LLSNVYASQGEWDGAENVRKLMDDNGVTKN-RGSSFVE 515
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 285/534 (53%), Gaps = 48/534 (8%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PNK T +IL NA + KEIH+++ K+ + + + C GS+
Sbjct: 326 PNK-ITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRC-----GSI 379
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A VF + R D+ ++ MI A + L +Y++M G+ P+ +T+
Sbjct: 380 KDARLVFDKMVRKDVISWTAMIGGLA------KSGFGAEALTVYQEMQQAGVEPNRVTYT 433
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
+L C+ G ++ QVV+ G+ D V N++++++ CG V AR +FD
Sbjct: 434 SILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFD----- 488
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
RM +R+I ++N++I G+ +EAL+LF +Q
Sbjct: 489 --------------------------RMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQ 522
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
EE +KPDK+T ++L+ACA G+++ + +H +R+ G D +G ALV Y KC
Sbjct: 523 ----EEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKC 578
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G A VF++M K++ ++W A+I A +G G++A F M+ EGV+P+ VTFV LL
Sbjct: 579 GSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLL 638
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
SAC+H+GL+E+GR F M + + P + HY CM+D+L RAG EAE LI++MP + +
Sbjct: 639 SACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQAN 698
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+WGALLG C++HGNV + E+ A+ + LD N YV L MYA AG +D K R L
Sbjct: 699 TRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKL 758
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
M++RG+ KE PG S ++V +H F + E++ L+ L+ MK G+
Sbjct: 759 MEQRGVTKE-PGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGY 811
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 231/508 (45%), Gaps = 84/508 (16%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVF---SHIKR 93
E K++ +++H II+ + + + + C GS+ A V+ S+++R
Sbjct: 35 EVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQC-----GSIEEARQVWKKLSYMER 89
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+ ++++N M+ + K LKL +QM G++PD T L C
Sbjct: 90 T-VHSWNAMV------VGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGAL 142
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G ++ Q ++ G+ DV V N +++++ CG + AR +FD+M + VVSW I GY
Sbjct: 143 EWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGY 202
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
G + A ++F++M+ +E V P++
Sbjct: 203 ADCGRSETAFEIFQKME-----------------------------------QEGVVPNR 227
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
IT SVL+A + A+ GK VH + +G + D +GTALV MY KCG + VF++
Sbjct: 228 ITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEK 287
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
+ +D +AW MI A GY +EA + + +M+ EGV PN +T+V LL+AC +S + G
Sbjct: 288 LVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWG 347
Query: 394 RW------------------CFVMM----------RHVY--LVEPHVYHYACMIDILSRA 423
+ + M R V+ +V V + MI L+++
Sbjct: 348 KEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKS 407
Query: 424 GLFSEAERLIRSMP---MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
G +EA + + M +EP+ + ++L C +E G ++ Q +++ A
Sbjct: 408 GFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVG 467
Query: 481 N-LCDMYAKAGRFDDVKKTRNLMKERGI 507
N L +MY+ G D ++ + M +R I
Sbjct: 468 NTLVNMYSMCGSVKDARQVFDRMIQRDI 495
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 225/470 (47%), Gaps = 63/470 (13%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
+EIH Q +++ L + I + C GS+ A VF +++ + ++ I I
Sbjct: 146 REIHFQAMQAGLLFDVKVANCILNMYAKC-----GSIEEAREVFDKMEKKSVVSWTITIG 200
Query: 105 ANA-CKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQV 163
A C SET +++++M G+ P+ +T+ +L + G +V+ ++
Sbjct: 201 GYADCGRSET-------AFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRI 253
Query: 164 VKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
+ G D V +++ ++ CG R +F+++ NR
Sbjct: 254 LNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNR---------------------- 291
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
++ +WN++I G +GG EA E++ +MQ E V P+KIT +L+AC
Sbjct: 292 ---------DLIAWNTMIGGLAEGGYWEEASEVYNQMQ----REGVMPNKITYVILLNAC 338
Query: 284 AYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWT 343
A+ GK +H + ++G D+ + AL+ MY +CG ++ A VF +M +KD ++WT
Sbjct: 339 VNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWT 398
Query: 344 AMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV 403
AMI A +G+G EA ++EM+ GV PN VT+ +L+AC+ +E GR +
Sbjct: 399 AMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEA 458
Query: 404 YL-VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
L + HV + ++++ S G +A ++ M ++ D+ + A++GG H LG
Sbjct: 459 GLATDAHVGN--TLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAAH---NLG- 511
Query: 463 KVAQYLID------LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
K A L D L P + Y+N+ + A +G + ++ L+++ G
Sbjct: 512 KEALKLFDRLQEEGLKP-DKVTYINMLNACANSGSLEWAREIHTLVRKGG 560
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 191/408 (46%), Gaps = 81/408 (19%)
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
+LK C + D + G V+ +++ D + N++I++++ CG + AR ++ +
Sbjct: 29 MLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKK----- 83
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
+ Y+ +R + SWN+++ G++Q G +AL+L ++MQ
Sbjct: 84 --------LSYM----------------ERTVHSWNAMVVGYIQYGYIEKALKLLRQMQ- 118
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
+ + PD+ TI S LS+C GA++ G+ +H ++GL DV + +++MY KCG
Sbjct: 119 ---QHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCG 175
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
+E A VF +M KK ++WT I +A G + AF+ F++ME EGV PN +T++ +L+
Sbjct: 176 SIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLN 235
Query: 383 A-----------CAHSGLVEKGR-------WCFVMM----------RHVY--LVEPHVYH 412
A HS ++ G V M R V+ LV +
Sbjct: 236 AFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA 295
Query: 413 YACMIDILSRAGLFSEAERLIRSMPME---PDVFVWGALLGGC----QMHGNVELGEKVA 465
+ MI L+ G + EA + M E P+ + LL C +H E+ +VA
Sbjct: 296 WNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVA 355
Query: 466 Q--YLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
+ + D+ N L MY++ G D + L+ ++ +RK+V
Sbjct: 356 KAGFTSDIGVQN-----ALISMYSRCGSIKDAR----LVFDKMVRKDV 394
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 286/527 (54%), Gaps = 49/527 (9%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLIT-RLLFFCALSVSGSLSYATNVFSHIKR 93
++ CKN+R L +IH IK D S T +L+ CA+S+S +L YA +
Sbjct: 12 LNSCKNLRALTQIHGLFIKYGV----DTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRLD 152
D + +N ++R SE+++ H+ + ++ +M+ G + PD +F F++K
Sbjct: 68 PDAFMFNTLVRG----YSESDEPHNS--VAVFVEMMRKGFVFPDSFSFAFVIKAVENFRS 121
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA---- 208
G ++ Q +K G+ +FV ++I ++ CG V AR +FDEM ++V+WNA
Sbjct: 122 LRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA 181
Query: 209 ---------------------------MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
M+ GY+++G+L+ A +F M R+ SW+++I
Sbjct: 182 CFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMI 241
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
G G E+ F+E+Q + + P+++++ VLSAC+ G+ + GK +HG++ +
Sbjct: 242 VGIAHNGSFNESFLYFRELQRAGM----SPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 297
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL-AWTAMISVFALNGYGKEAFD 360
+G V + AL+DMY +CG V A VF+ M +K + +WT+MI+ A++G G+EA
Sbjct: 298 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F EM A GV P+ ++F+ LL AC+H+GL+E+G F M+ VY +EP + HY CM+D+
Sbjct: 358 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 417
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
R+G +A I MP+ P VW LLG C HGN+EL E+V Q L +LDP N V
Sbjct: 418 GRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 477
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFS 527
L + YA AG++ DV R M + I+K S VEV +++F+
Sbjct: 478 LLSNAYATAGKWKDVASIRKSMIVQRIKK-TTAWSLVEVGKTMYKFT 523
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 249/411 (60%), Gaps = 9/411 (2%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECT---KRLDGLVGASVYGQVVKFGVC-DDVFVQ 175
K + QML + P+ +T LL C + GA+++ K G +DV V
Sbjct: 70 KAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVG 129
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
++I ++ CG + AR++FD+M R++VSWN MI GY+++GD+D AL LF ++ +N+
Sbjct: 130 TALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVV 189
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SW +I GFV+ EALE F+EMQ + V PD +T+ +++SACA LGA+ G WV
Sbjct: 190 SWTVVIGGFVKKECYEEALECFREMQLAGV----VPDFVTVIAIISACANLGALGLGLWV 245
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H + + +V + +L+DMY +CGC+E A VF M +++ ++W ++I FA+NG
Sbjct: 246 HRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLA 305
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+A FR M+ EG+ PN V++ L+AC+H+GL+++G F ++ + P + HY C
Sbjct: 306 DKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGC 365
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
++D+ SRAG EA +I+ MPM P+ V G+LL C+ G+VEL EKV +Y ++L P
Sbjct: 366 LVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGG 425
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ YV ++YA G++D K R MKERG++K + SS+E+D +H+F
Sbjct: 426 DSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNL-AFSSIEIDSGIHKF 475
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 331 FKEMPKKD-TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
K P + T++WT+ IS N +A F +M V PNH+T + LLSACAHS
Sbjct: 43 LKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPS 102
Query: 390 VEKGRWCFVMMRHVY---LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+ + H + V +ID+ ++ G A + M + ++ W
Sbjct: 103 KTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVR-NLVSWN 161
Query: 447 ALLGGCQMHGNVE 459
++ G +G+V+
Sbjct: 162 TMIDGYMKNGDVD 174
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 290/518 (55%), Gaps = 48/518 (9%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C+N+ ++++H ++ + LQ + +LL+ + ++ A ++F + D
Sbjct: 13 CRNVFHIRQVHAHVVANGTLQD---LVIANKLLY--TYAQHKAIDDAYSLFDGLTMRDSK 67
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
T+++M+ A K+ + H+G C ++++L G++PD T PF+++ C R D +G
Sbjct: 68 TWSVMVGGFA-KAGD----HAG-CYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGR 121
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++ V+K G+ D FV S++ ++ C V A+ LF+
Sbjct: 122 VIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFE--------------------- 160
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
RM +++ +W +I + A E+L LF M+ EE V PDK+ +
Sbjct: 161 ----------RMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMR----EEGVVPDKVAMV 205
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
+V++ACA LGA+ ++ + Y+ R+G DV++GTA++DMY KCG VE A VF M +K
Sbjct: 206 TVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEK 265
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+ ++W+AMI+ + +G GK+A D F M + + PN VTFV LL AC+H+GL+E+G F
Sbjct: 266 NVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFF 325
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
M + V P V HY CM+D+L RAG EA RLI +M +E D +W ALLG C++H
Sbjct: 326 NSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSK 385
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
+EL EK A L++L P N YV L ++YAKAG+++ V K R++M +R ++K +PG + +
Sbjct: 386 MELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKK-IPGWTWI 444
Query: 518 EVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
EVD ++FS+ +E+ +L L K ++ G+
Sbjct: 445 EVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGY 482
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 293/542 (54%), Gaps = 72/542 (13%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A +F + D+ ++N MI S ++ S K L L++QML GI+ D T +
Sbjct: 204 ARKLFDELGDRDVISWNSMI------SGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV 257
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
+ C+ L+G +++G +K ++ + N ++ ++ G + SA +F+ M R V
Sbjct: 258 VAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSV 317
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKR----NIFSWNSII-----TGFVQGGR----- 249
VSW +MI GY R G D+++ LF M+K +IF+ +I+ TG ++ G+
Sbjct: 318 VSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNY 377
Query: 250 -------------------------AREALELFQEMQSSSV---EEMV------------ 269
+A +F EMQ + M+
Sbjct: 378 IKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEA 437
Query: 270 -----------KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
KP+ IT+A +L ACA L A++ G+ +HG++ R+G D + ALVDMY
Sbjct: 438 LNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMY 497
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + A +F +P+KD ++WT MI+ + ++GYG EA F EM G+ P+ V+F+
Sbjct: 498 LKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFI 557
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+L AC+HSGL+++G F MMR+ +EP HYAC++D+L+RAG S+A + I+ MP+
Sbjct: 558 SILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPI 617
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EPD +WGALL GC+++ +V+L EKVA+++ +L+P N +YV L ++YA+A ++++VKK
Sbjct: 618 EPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKL 677
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQY 558
R + RG+RK PGCS +E+ G VH F S + ++ L+L MK G
Sbjct: 678 RERIGRRGLRKN-PGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPK 736
Query: 559 IR 560
+R
Sbjct: 737 MR 738
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 159/303 (52%), Gaps = 32/303 (10%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D + + ++ +++ CG + R +FD+++N V WN ++ GY + G+ +L LF+RM+
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR 194
Query: 231 K------------------RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+ R++ SWNS+I+G+V G + + L+LF++M + D
Sbjct: 195 ELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGI----NTD 250
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
T+ SV++ C+ G + G+ +HGY ++ ++ + L+DMY K G + A VF+
Sbjct: 251 LATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFE 310
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
M ++ ++WT+MI+ +A G + F EME EG+ P+ T +L ACA +GL+E
Sbjct: 311 TMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLEN 370
Query: 393 GRWCFVMMRHVYLVE----PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
G+ H Y+ E ++ ++D+ ++ G +A + M ++ D+ W +
Sbjct: 371 GKDV-----HNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTM 424
Query: 449 LGG 451
+GG
Sbjct: 425 IGG 427
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 50/273 (18%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS+ A +VFS ++ D+ ++N MI K+S N+ L L+ +M P+ +
Sbjct: 401 GSMGDAHSVFSEMQVKDIVSWNTMI-GGYSKNSLPNEA-----LNLFVEMQYNS-KPNSI 453
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C G ++G +++ G D V N+++ +++ CG + AR+LFD +
Sbjct: 454 TMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMI 513
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+D+VSW MI GY G EA+ F
Sbjct: 514 PEKDLVSWTVMIAGY-------------------------------GMHGYGSEAIAAFN 542
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT----AL 314
EM++S +E PD+++ S+L AC++ G +D G W G+ +C + + +
Sbjct: 543 EMRNSGIE----PDEVSFISILYACSHSGLLDEG-W--GFFNMMRNNCCIEPKSEHYACI 595
Query: 315 VDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
VD+ + G + +AY K MP + D W A++
Sbjct: 596 VDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 628
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 138/349 (39%), Gaps = 43/349 (12%)
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
I +N I F + G R A+EL + +E T SVL CA L +I G+
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDLELR------TYCSVLQLCADLKSIQDGR 121
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG 353
+H ++ + ++ D V+G+ LV MY CG + +F ++ + W +++ +A G
Sbjct: 122 RIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIG 181
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
+E+ F+ M G+R VE R F L + V +
Sbjct: 182 NFRESLSLFKRMRELGIRR-----------------VESARKLFD-----ELGDRDVISW 219
Query: 414 ACMIDILSRAGLFSEAERLIRSM---PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
MI GL + L M + D+ +++ GC G + LG + Y I
Sbjct: 220 NSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIK 279
Query: 471 LDPLNHAFYVNLC--DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG------- 521
+N C DMY+K+G + + M ER + + +G
Sbjct: 280 AS-FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVR 338
Query: 522 VVHEFSMKG-SPKVVKEELVLILNGLSKIMKNG-GFGQYIRGLSMEAQV 568
+ HE +G SP + +L + +++NG YI+ M++ +
Sbjct: 339 LFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDL 387
>gi|10178273|emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 272/458 (59%), Gaps = 13/458 (2%)
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
+ A++V+ + YA S + Y +N +IR +N + K + +Y QML
Sbjct: 794 YMLAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGF------SNSRNPEKSISVYIQMLR 847
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
G+ PD +T+PFL+K ++ + +G S++ VVK G+ D+F+ N++I ++ + S
Sbjct: 848 FGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQAS 907
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
AR LFDEM ++++V+WN+++ Y +SGD+ A +F M +R++ +W+S+I G+V+ G
Sbjct: 908 ARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEY 967
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
+ALE+F +M K +++T+ SV+ ACA+LGA++ GK VH Y+ L V++
Sbjct: 968 NKALEIFDQMMRMGSS---KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVIL 1024
Query: 311 GTALVDMYGKCGCVERAYGVF--KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
T+L+DMY KCG + A+ VF + + D L W A+I A +G+ +E+ F +M
Sbjct: 1025 QTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRES 1084
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
+ P+ +TF+ LL+AC+H GLV++ W F EP HYACM+D+LSRAGL +
Sbjct: 1085 KIDPDEITFLCLLAACSHGGLVKEA-WHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKD 1143
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A I MP++P + GALL GC HGN+EL E V + LI+L P N YV L ++YA
Sbjct: 1144 AHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAI 1203
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+F + R M+++G++K + G S +++DG H F
Sbjct: 1204 NKQFRAARSMREAMEKKGVKK-IAGHSILDLDGTRHRF 1240
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 187/471 (39%), Gaps = 102/471 (21%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L+L++ + G PD + + L+K K + ++ ++V G+ V NS+I
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDG 658
Query: 182 FMACGFVTSA-----RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF- 235
+ G + RM DE N DV+++ ++I G SG A+ + MK ++ +
Sbjct: 659 WCKEGEIDRGLSCIVRMYEDE-KNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYP 717
Query: 236 ---SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
++ ++I G + G + EAL F+EM+ +E PD S++S+ I+ G
Sbjct: 718 NRITFMALIQGLCKCGWSGEALVYFREMEEKEME----PDSAVYLSLVSSFLSSENINAG 773
Query: 293 -----KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMIS 347
+ VH +D + ++ + V+ AY ++ W +I
Sbjct: 774 FGIFREMVHKGRFPVSVDRNYMLAVNVT------SDVDYAYKFLSKLSDPPNYGWNFVIR 827
Query: 348 VFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA-----------HSGLVEKG-RW 395
F+ + +++ + +M G+ P+H+T+ L+ + + H +V+ G W
Sbjct: 828 GFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEW 887
Query: 396 ----CFVMM------------RHVYLVEPH--VYHYACMIDILSRAGLFSEAERLIRSMP 437
C ++ R ++ PH + + ++D +++G A RL+
Sbjct: 888 DLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA-RLVFDEM 946
Query: 438 MEPDVFVWGALLGG------------------------------------CQMHGNVELG 461
E DV W +++ G C G + G
Sbjct: 947 SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 1006
Query: 462 EKVAQYLIDLD-PLNHAFYVNLCDMYAKAGRFDD---------VKKTRNLM 502
+ V +Y++D+ PL +L DMYAK G D VK+T LM
Sbjct: 1007 KTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 1057
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 114/273 (41%), Gaps = 52/273 (19%)
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFS----WNSIITGFVQGGRAREALELF 257
D S + +I +++ +D+A+ L + + + +N+II G + GR+ E+L+L
Sbjct: 438 DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 258 QEMQSSSVEEMVKPDKITIASVLSA----CAYLGAID---------------HGKWVHGY 298
EM+ + VE P + T+ + C ++GA+D H ++
Sbjct: 498 GEMKDAGVE----PSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 299 LRRSGLDCD----------------VVIGTALVDMYGKCGCVERAYGVFKEMPKK----D 338
L +G D +V TA +D K V+R +F+++ D
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
+A+ +I EA F EM ++G++P T+ ++ G +++G C V
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 399 MMRHVYLVE--PHVYHYACMIDILSRAGLFSEA 429
M Y E P V Y +I L +G SEA
Sbjct: 674 RM---YEDEKNPDVITYTSLIHGLCASGRPSEA 703
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 120/303 (39%), Gaps = 56/303 (18%)
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
YN +I CK + ++ LKL +M G+ P T + +R D +
Sbjct: 477 YNNIIEG-MCKEGRSEES-----LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALD 530
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMAC--GFVTSARMLFDEMSNR----DVVSWNAMIIG 212
+ ++ +G + +++++ + C G A D+++ +V+ A I G
Sbjct: 531 LLKKMRFYGF--EPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDG 588
Query: 213 YLRSGDLDVALDLFRRMKKR----NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+++ +D L+LFR + ++ +++ +I + R EA LF EM V +
Sbjct: 589 LIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEM----VSKG 644
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
+KP T S++ G ID G C+ R Y
Sbjct: 645 LKPTVATYNSMIDGWCKEGEIDRG----------------------------LSCIVRMY 676
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL---LSACA 385
++ D + +T++I +G EA + EM+ + PN +TF+ L L C
Sbjct: 677 ---EDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 386 HSG 388
SG
Sbjct: 734 WSG 736
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 27/250 (10%)
Query: 44 LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL-----YT 98
LK + ++ S C + R L +G + A++VF ++ L YT
Sbjct: 125 LKALVVDVLNSRCFMSPGAFGFFIR-----CLGNAGLVDEASSVFDRVREMGLCVPNAYT 179
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
YN ++ A + +S + + + K+M G D T +L+ S
Sbjct: 180 YNCLLEAISKSNSSSVELVEAR----LKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALS 235
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV----VSWNAMIIGYL 214
V+ +++ G D+ V+S F G V A L + + RD+ ++ +I G++
Sbjct: 236 VFNEILSRGWLDEHISTILVVS-FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFV 294
Query: 215 RSGDLDVALDLFRRMKK----RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
+ +D A LF +M++ +I ++ +I G + AL L+ E++ S +
Sbjct: 295 KESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSG----IP 350
Query: 271 PDKITIASVL 280
PD+ + +L
Sbjct: 351 PDRGILGKLL 360
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 299/528 (56%), Gaps = 26/528 (4%)
Query: 45 KEIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMI 103
K++H ++I+S P + +LI L C GS A VF+ ++ + ++ ++I
Sbjct: 290 KQLHAKVIRSLPQIDPYVASALI-ELYAKC-----GSFKEAKRVFNSLQDRNSVSWTVLI 343
Query: 104 RAN---ACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+ C S K ++L+ QM ++ D L+ C R+D +G ++
Sbjct: 344 GGSLQYECFS---------KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 394
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+K G + V NS+ISL+ CG + +A +F MS RD+VSW +MI Y + G++
Sbjct: 395 SLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII 454
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A + F M RN +WN+++ ++Q G + L+++ M S ++ V PD +T ++
Sbjct: 455 KAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS---QKDVTPDWVTYVTLF 511
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
CA +GA G + G+ ++GL +V + A + MY KCG + A +F + KD +
Sbjct: 512 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVV 571
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+W AMI+ ++ +G GK+A TF +M ++G +P+++++V +LS C+HSGLV++G+ F MM
Sbjct: 572 SWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 631
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
V+ + P + H++CM+D+L RAG +EA+ LI MPM+P VWGALL C++HGN EL
Sbjct: 632 TRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDEL 691
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
E A+++ +LD + Y+ L +Y+ AG+ DD + R LM+++GI+K PG S +EV+
Sbjct: 692 AELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKN-PGYSWMEVE 750
Query: 521 GVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSMEAQV 568
VH F + V +++ I N + ++M+ Y+R S +++
Sbjct: 751 NKVHVFK---ADDVSHPQVIAIRNKMDELMEKIAHLGYVRTESPRSEI 795
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 190/378 (50%), Gaps = 45/378 (11%)
Query: 144 LKECTKRLDGLVGA-SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA-RMLFDEMSNR 201
L+ C R L GA +++G++V G+ VF+QN+++ +++CG ++ A R+L ++
Sbjct: 11 LRSCGSR-GALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 69
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
+V++ N M+ GY + G L A +LF RM +R++ SWN++++G+ Q R + LE F M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
S P+ T V+ +C LG + + G + D + TALVDM+ +C
Sbjct: 130 RSGDS---LPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 322 GCVERA-------------------------YGV------FKEMPKKDTLAWTAMISVFA 350
G V+ A YG+ F++M ++D ++W MI+ +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHVYLVEPH 409
+G +EA EM +GVR + T+ L+ACA + G+ ++R + ++P+
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH----GNVELGEKVA 465
V + +I++ ++ G F EA+R+ S+ + + W L+GG + +VEL ++
Sbjct: 307 V--ASALIELYAKCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSKSVELFNQMR 363
Query: 466 QYLIDLDPLNHAFYVNLC 483
L+ +D A ++ C
Sbjct: 364 AELMAIDQFALATLISGC 381
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 197/432 (45%), Gaps = 27/432 (6%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L +A C + + + + IK P ++IT + + GSLS A +F
Sbjct: 45 LLHAYLSCGALSDARRLLRADIKEP--------NVITHNIMMNGYAKQGSLSDAEELFDR 96
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLLKECTK 149
+ R D+ ++N ++ S L+ + M +G S P+ TF ++K C
Sbjct: 97 MPRRDVASWNTLM------SGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGA 150
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+ + G KF D V+ +++ +F+ CG+V A LF ++ + N+M
Sbjct: 151 LGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSM 210
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
+ GY + +D A++ F M +R++ SWN +I Q GR REAL L EM + V
Sbjct: 211 LAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH----RKGV 266
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
+ D T S L+ACA L ++ GK +H + RS D + +AL+++Y KCG + A
Sbjct: 267 RLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKR 326
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF + +++++WT +I ++ + F +M AE + + L+S C +
Sbjct: 327 VFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMD 386
Query: 390 VEKGRWCFVMMRHVYLVEPH---VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+ GR + + L H + +I + ++ G AE + SM E D+ W
Sbjct: 387 LCLGR----QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-ERDIVSWT 441
Query: 447 ALLGGCQMHGNV 458
+++ GN+
Sbjct: 442 SMITAYSQIGNI 453
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 307/594 (51%), Gaps = 93/594 (15%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHI-KRSD 95
+C + + L+++HTQ++ + + T ++H L+++ + + Y++ +FSHI +
Sbjct: 33 QCSSTKTLQQVHTQMVVNSSIHTPNNH-LLSKAIHL------KNFPYSSLLFSHIAPHPN 85
Query: 96 LYTYNIMIRANACKSSETNDTHSGK-CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
Y +NIMIRA T H+ L L+ +M+ ++PD TFPF C
Sbjct: 86 DYAFNIMIRA------LTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLS 139
Query: 155 VGASVYGQVVKFGVCDD----------------------VFVQ---------NSVISLFM 183
+ + + K + D VF + NS+I+ +
Sbjct: 140 HACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYA 199
Query: 184 ACGFVTSARMLFDEMSNRD--------VVS---------------W-------------- 206
G A +F EM RD +VS W
Sbjct: 200 KAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNS 259
Query: 207 ---NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
+A+I Y + G+L+ A +F M R++ +WN++I+G+ Q G A EA+ LF M+
Sbjct: 260 YIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMK-- 317
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
E+ V +KIT+ +VLSACA +GA+D GK + Y + G D+ + TAL+DMY K G
Sbjct: 318 --EDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGS 375
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG--VRPNHVTFVGLL 381
++ A VFK+MP+K+ +W AMIS A +G KEA F+ M EG RPN +TFVGLL
Sbjct: 376 LDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLL 435
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
SAC H+GLV++G F MM ++ + P + HY+CM+D+L+RAG EA LIR MP +PD
Sbjct: 436 SACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPD 495
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
GALLG C+ NV++GE+V + ++++DP N Y+ +YA ++D + R L
Sbjct: 496 KVTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLL 555
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
M+++GI K PGCS +EV+ +HEF + +L I++ L + +K G+
Sbjct: 556 MRQKGITK-TPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGY 608
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 280/514 (54%), Gaps = 39/514 (7%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSP-CLQTNDHHSLITRLLFFCALSV 77
+ P N L+ +C N LK+IHTQII + QT LI +S
Sbjct: 140 MKPKNHIFNHPTLQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLI-------KISS 192
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT-GISPD 136
+L YA +F++I ++ YN +I + ++TN LY ++L + P+
Sbjct: 193 KFNLPYAFKIFNYISNPTIFLYNTLISSLI---NQTNQNQIHLAFSLYNKILTNKNLQPN 249
Query: 137 CLTFPFLLKECTKRLDGL-VGASVYGQVVKFGVCD-DVFVQNSVISLFMACGFVTSARML 194
TFP L K C G ++ V+KF D FVQ S+++ + G + +R +
Sbjct: 250 SFTFPSLFKACCSNQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYI 309
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD ++ D+ +WN ++ Y RS + F + E+L
Sbjct: 310 FDRINEPDLATWNVILNAYARSSSYHSYSNSFD------------------DADFSLESL 351
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
LF++MQ + +P+++TI +++SAC+ LGA+ G WVH ++ R+ + + +GTA
Sbjct: 352 YLFRDMQVIGI----RPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAF 407
Query: 315 VDMYGKCGCVERAYGVFKEMPK--KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
VDMY KCGC+ A VF +MP+ +D+ +TAMI FA++GYG +A + +R+M+ +G+ P
Sbjct: 408 VDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVP 467
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
+ TFV + AC+H GLVE+G F M+ V+ VEP + HY C+ID+L RAG EAE
Sbjct: 468 DSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEW 527
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
+ MPM+P+ +W +LLG ++HGN+ +GE LI+L+P YV L +MYA GR
Sbjct: 528 LADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRV 587
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+DVK+ R LMK G+ K +PG S VE+ G +HEF
Sbjct: 588 NDVKRVRKLMKHHGVNK-LPGFSLVEIKGAMHEF 620
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 288/521 (55%), Gaps = 57/521 (10%)
Query: 27 TKLILRNAIDECKNMRE---------LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV 77
T ++L +++C N+ + L++IH I++ + +D + + +L
Sbjct: 7 TSVLLLPMVEKCINLLQTYGVSSLTKLRQIHAFSIRN-GVSISDAELGKHLIFYLVSLPS 65
Query: 78 SGSLSYATNVFSHIKRS-DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISP 135
+SYA VFS I++ +++ +N +IR A E ++ S + LY++M +G + P
Sbjct: 66 PPPMSYAHKVFSKIEKPINVFIWNTLIRGYA----EIGNSVSA--VSLYREMRASGFVEP 119
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D T+PFLLK K D +G +++ V++ G ++VQNS++ L+ CG V SA
Sbjct: 120 DTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASA---- 175
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
+F +M ++++ +WNS+I GF + G+ EAL
Sbjct: 176 ---------------------------YKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
L+ EM + KPD TI S+LSACA +GA+ GK H Y+ + GL ++ L+
Sbjct: 209 LYTEMDLKGI----KPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLL 264
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA-EGVRPNH 374
D+Y +CG VE A +F EM K++++WT++I A+NG GKEA + F+ ME+ EG+ P
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCE 324
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+TFVG+L AC+H G+V++G F M Y +EP + H+ CM+D+L+RAG +A I
Sbjct: 325 ITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIL 384
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
MPM+P+V +W LLG C +HG+ +L E ++ L+P + YV L +MYA R+ D
Sbjct: 385 KMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSD 444
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM--KGSPK 533
V+K R M G+RK VPG S VEV VHEF M K P+
Sbjct: 445 VQKIRKQMLRDGVRK-VPGHSLVEVGNRVHEFLMGDKSHPQ 484
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/529 (35%), Positives = 288/529 (54%), Gaps = 47/529 (8%)
Query: 25 ESTKLILRNAIDECKN-MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS-LS 82
+S + IL + + C ++ K+IHT + + + H +LL CA+S+S L+
Sbjct: 6 KSCEEILLSLLSNCNTTLKTTKQIHTHLYVT---GLHTHPFFFGKLLLNCAVSISDHVLN 62
Query: 83 YATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLTFP 141
Y+ +F H D + YN +IR+ + S+ + L+ + Q+L + PD +F
Sbjct: 63 YSLRLFHHFPNPDTFMYNTLIRSLSHSSTPLSS------LQPFIQLLRHPTLLPDSFSFA 116
Query: 142 FLLKE-----CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
F LK C+KR G ++ + G D +FV ++IS++ CG AR +FD
Sbjct: 117 FTLKGIANDGCSKRQ----GIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFD 172
Query: 197 EMSNRDVVSWNAMIIGYLRSG---DLDVALD----LFRRMKKRNIFSWNSIITGFVQGGR 249
EMS +VV+WNA++ R G L V+ +F MK R+ SW+++I GF + G
Sbjct: 173 EMSQPNVVAWNAVVTACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGS 232
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
+A F+E+ + + +P ++++ VLSACA GA + GK +HG++ ++G C V
Sbjct: 233 FHDAFGFFKEL----LRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVS 288
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+ AL+D Y KCG V+ A VF IS+ A++G EA F EME G
Sbjct: 289 VNNALIDTYSKCGNVDMAKLVFN-------------ISL-AMHGRADEAIRVFHEMEESG 334
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
VRP+ VTF+ LL AC+HSGLVE+G F MR+ Y +EP + HY CM+D+ RA +A
Sbjct: 335 VRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKA 394
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
IR MP+ P+V +W LLG C +HGN+EL E V L ++DP N +V L ++YA A
Sbjct: 395 YEFIRQMPILPNVIIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVA 454
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
G++ DV R M E+ ++K +PG S +E+D V + F P V +E
Sbjct: 455 GKWKDVAGIRRTMIEQSMKK-IPGWSMIEIDKVNYGFVAGEKPNEVTKE 502
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/488 (35%), Positives = 276/488 (56%), Gaps = 47/488 (9%)
Query: 41 MRELKEIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
M+ L++IH +I+ P + + LI+++L F ALS G+ YA +FS I ++ Y
Sbjct: 1 MQILRQIHARILTHVPPISSVSF--LISKILSFAALSPFGNFDYARKIFSQIPNPGIFAY 58
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGI-SPDCLTFPFLLKECTKRLDGLVGAS 158
N +IR C ++ S + + L+K M+ G +P+ T F+LK C+ + G
Sbjct: 59 NSVIRG--CLYTKIP---SKEPIHLFKDMVGKGYPNPNTFTMAFVLKACSIIMALEEGKQ 113
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
++ Q+++ G +VQ+S+++ + C +T AR +FDE++
Sbjct: 114 IHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEIT------------------- 154
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+RN+ W+++++G+ + G EAL +F+EMQ +E PD++++
Sbjct: 155 ------------ERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIE----PDEVSLVG 198
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
VLSACA +GA+D GKWVH Y+++ + D+ + TAL++MY KCGC+E+A +F EM KD
Sbjct: 199 VLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKD 258
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
+ AW++MI A++G ++A + F ME +PNHVTF+G+LSACAH GLV G+ +
Sbjct: 259 SKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWS 318
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
M + +EP + HY CM+D+L R GL EA +P PD +W LL + +
Sbjct: 319 SMLELG-IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRML 376
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
+ E VA L++L+P Y+ L ++YA + + V R +MKE GI K +PGC+S+E
Sbjct: 377 QKAEMVAGKLLELEPWKAENYIILANLYASVSQLEKVSHVRKMMKENGI-KALPGCTSIE 435
Query: 519 VDGVVHEF 526
VDG VH F
Sbjct: 436 VDGFVHNF 443
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/442 (36%), Positives = 262/442 (59%), Gaps = 18/442 (4%)
Query: 85 TNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQM-LCTGISPDCLTFPF 142
T VF + D ++NIMI CK E + + +Y++M + + P+ T
Sbjct: 163 TQVFEEMPERDAVSWNIMISGYVRCKRFE-------EAVDVYRRMQMESNEKPNEATVVS 215
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
L C + +G ++ + + + N+++ ++ CG V+ AR +FD M ++
Sbjct: 216 TLSACAVLRNLELGKEIHDYIANELDLTPI-MGNALLDMYCKCGCVSVAREIFDAMIVKN 274
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
V W +M+ GY+ G LD A LF R R++ W ++I G+VQ +A+ LF EMQ
Sbjct: 275 VNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQI 334
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
VE PDK + ++L+ CA LGA++ GKW+H Y+ + + D V+ TAL++MY KCG
Sbjct: 335 RGVE----PDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCG 390
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
C+E++ +F + DT +WT++I A+NG EA + F M+ G++P+ +TFV +LS
Sbjct: 391 CIEKSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLS 450
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD- 441
AC H+GLVE+GR F M +Y +EP++ HY C ID+L RAGL EAE L++ +P + +
Sbjct: 451 ACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPDQNNE 510
Query: 442 --VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
V ++GALL C+ +GN+++GE++A L + + + + L +YA A R++DV+K R
Sbjct: 511 IIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVR 570
Query: 500 NLMKERGIRKEVPGCSSVEVDG 521
+ MK+ GI+K VPG S++EVDG
Sbjct: 571 SKMKDLGIKK-VPGYSAIEVDG 591
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 212/457 (46%), Gaps = 85/457 (18%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ CK+M +LK+I I C ++ +L+ F S G +YA +F+HI
Sbjct: 15 LKSCKSMSQLKQIQAHIF---CFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIHHP 71
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
L+ YN+MI+A + S + + L++Q+ G+ PD T+P++LK +
Sbjct: 72 SLFIYNLMIKAFVKRGSLRS------AISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVR 125
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G ++ VVK G+ D +V NS++ ++ G V +F+EM RD VSWN MI GY+
Sbjct: 126 EGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYV 185
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
R + A+D++RRM +M+S+ KP++
Sbjct: 186 RCKRFEEAVDVYRRM-----------------------------QMESNE-----KPNEA 211
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ S LSACA L ++ GK +H Y+ LD ++G AL+DMY KCGCV A +F M
Sbjct: 212 TVVSTLSACAVLRNLELGKEIHDYIANE-LDLTPIMGNALLDMYCKCGCVSVAREIFDAM 270
Query: 335 -------------------------------PKKDTLAWTAMISVFALNGYGKEAFDTFR 363
P +D + WTAMI+ + + ++A F
Sbjct: 271 IVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFG 330
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA----CMIDI 419
EM+ GV P+ V LL+ CA G +E+G+W H Y+ E + A +I++
Sbjct: 331 EMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWI-----HNYIDENRIKMDAVVSTALIEM 385
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
++ G ++ + + + D W +++ G M+G
Sbjct: 386 YAKCGCIEKSLEIFNGLK-DMDTTSWTSIICGLAMNG 421
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 203/433 (46%), Gaps = 50/433 (11%)
Query: 173 FVQNSVISLFMACGFVTSARML------FDEMSNRDVVSWNAMIIGYLRS--GDLDVALD 224
++ + ISL +C ++ + + F +RD++ N ++ + S GD + A
Sbjct: 6 LLKGTYISLLKSCKSMSQLKQIQAHIFCFGLQQDRDIL--NKLMAFSMDSSLGDFNYANR 63
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
+F + ++F +N +I FV+ G R A+ LFQ+++ E V PD T VL
Sbjct: 64 IFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLR----ERGVWPDNYTYPYVLKGIG 119
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
+G + G+ +H ++ ++GL+ D + +L+DMY + G VE VF+EMP++D ++W
Sbjct: 120 CIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNI 179
Query: 345 MISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV 403
MIS + +EA D +R M+ E +PN T V LSACA +E G+ + +
Sbjct: 180 MISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIANE 239
Query: 404 YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEK 463
+ P + + ++D+ + G S A + +M ++ +V W +++ G + G ++
Sbjct: 240 LDLTPIMGN--ALLDMYCKCGCVSVAREIFDAMIVK-NVNCWTSMVTGYVICGQLD---- 292
Query: 464 VAQYLIDLDP-LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE-------VPGCS 515
A+YL + P + + + + Y + F+D M+ RG+ + + GC+
Sbjct: 293 QARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCA 352
Query: 516 S------------------VEVDGVVHEFSMKGSPKV-VKEELVLILNGLSKIMKNGGFG 556
+++D VV ++ K E+ + I NGL K M +
Sbjct: 353 QLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGL-KDMDTTSWT 411
Query: 557 QYIRGLSMEAQVS 569
I GL+M + S
Sbjct: 412 SIICGLAMNGKTS 424
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 204/611 (33%), Positives = 314/611 (51%), Gaps = 93/611 (15%)
Query: 14 NSPAKVSPPNKESTKLILRNAIDEC--KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF 71
+ P + N E T L I +C K++ L +IH I++ L +N +L+T +
Sbjct: 5 SQPQRTLWSNAERTCL----HILQCRTKSIPTLLQIHAFILRHS-LHSN--LNLLTAFVT 57
Query: 72 FCALSVSGSLSYATNVFSHIKR-------SDLYTYNIMIRANACKSSETNDTHSGKCLKL 124
CA S++ S + +H +R D + N MI A+ + L
Sbjct: 58 TCA-SLAASAKRPLAIINHARRFFNATHTRDTFLCNSMIAAHFAARQFSQP------FTL 110
Query: 125 YKQM--LCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
++ + +PD TF L+K C R+ G ++G V+K GVC D++V +++ ++
Sbjct: 111 FRDLRRQAPPFTPDGYTFTALVKGCATRVATGEGTLLHGMVLKNGVCFDLYVATALVDMY 170
Query: 183 MA-------------------------------CGFVTSARMLFDEMSNRDVVSWNAMII 211
+ CG ++ AR LFDEM +RD+V++NAMI
Sbjct: 171 VKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMID 230
Query: 212 GYLRSGDLDVALDLFRRMKKRNI-------------------------------FSWNSI 240
GY++ G + +A +LF M++RN+ F+WN++
Sbjct: 231 GYVKMGCVGLARELFNEMRERNVVSWTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAM 290
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
I G+ Q R+ +ALELF+EMQ++SVE P+++T+ VL A A LGA+D G+W+H +
Sbjct: 291 IGGYCQNRRSHDALELFREMQTASVE----PNEVTVVCVLPAVADLGALDLGRWIHRFAL 346
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
R LD IGTAL+DMY KCG + +A F+ M +++T +W A+I+ FA+NG KEA +
Sbjct: 347 RKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTERETASWNALINGFAVNGCAKEALE 406
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F M EG PN VT +G+LSAC H GLVE+GR F M + + P V HY CM+D+L
Sbjct: 407 VFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRWFNAMER-FGIAPQVEHYGCMVDLL 465
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
RAG EAE LI++MP + + + + L C +V E+V + ++ +D YV
Sbjct: 466 GRAGCLDEAENLIQTMPYDANGIILSSFLFACGYFNDVLRAERVLKEVVKMDEDVAGNYV 525
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELV 540
L ++YA R+ DV+ + +MK+RG KEV CS +E+ G EF+ E +
Sbjct: 526 MLRNLYATRQRWTDVEDVKQMMKKRGTSKEV-ACSVIEIGGSFIEFAAGDYLHSHLEVIQ 584
Query: 541 LILNGLSKIMK 551
L L LSK MK
Sbjct: 585 LTLGQLSKHMK 595
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 263/444 (59%), Gaps = 13/444 (2%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ ++L+ +M GI +L G ++G VVK G + +FV+NS+I
Sbjct: 1092 ETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLI 1151
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR------- 232
L+ G V +AR+LF E+ +++VSWNA+I Y G D A +F +++K
Sbjct: 1152 CLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 1211
Query: 233 -NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
N+ SW+++I GF G+ EALELF+ MQ + V K + +TIASVLS CA L A+
Sbjct: 1212 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKV----KANSVTIASVLSVCAELAALHL 1267
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
G+ +HG++ RS +D ++++G L++MY K G + VF+++ KD ++W M++ + +
Sbjct: 1268 GREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGI 1327
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
+G G+ A TF +M +G P+ VTFV +LSAC+H+GLV +GR F M + VEP +
Sbjct: 1328 HGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQME 1387
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
HYACM+D+L RAGL EA ++++SMP+EP+ VWGALL C+MH N E+ E+ A + +L
Sbjct: 1388 HYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNL 1447
Query: 472 DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGS 531
+ Y+ L ++YA +GR++D K R K +G++K PG S ++V V+ FS +
Sbjct: 1448 NSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKK-TPGQSWIQVKKKVYMFSAGNT 1506
Query: 532 PKVVKEELVLILNGLSKIMKNGGF 555
EE+ IL L M+ G+
Sbjct: 1507 QHAELEEVYRILKDLGLQMEVEGY 1530
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 219/476 (46%), Gaps = 70/476 (14%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVF--SHIK 92
+ +C ++IH+QII T H S + G +S A VF S I+
Sbjct: 879 LQQCSKSHLSQQIHSQII-----VTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIE 933
Query: 93 -RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRL 151
S+L +N ++RAN + + L++Y +M G+S D TFP +++ C
Sbjct: 934 CFSNLLLWNSILRANVAHG------YCEEALEIYCRMRKLGVSADGFTFPLVIRACALMG 987
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
+ SV+G VV+ G ++ V N ++ ++ G + AR +F+ M+ R VSWN M+
Sbjct: 988 SRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVS 1047
Query: 212 GYLRSGDLDVALDLFRRMK----KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
GY + D A ++FR M + N+ +W S+++ + G+ E +ELF M+ +
Sbjct: 1048 GYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGA 1107
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV--- 324
+ +A VLS L A D GK +HGY+ + G + + + +L+ +YGK G V
Sbjct: 1108 TAE----ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAA 1163
Query: 325 ----------------------------ERAYGVFKEMPKKD--------TLAWTAMISV 348
+ A+ +F ++ K D ++W+A+I
Sbjct: 1164 RILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGG 1223
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY--LV 406
FA G G+EA + FR M+ V+ N VT +LS CA + GR + HV L+
Sbjct: 1224 FASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGRE---IHGHVVRSLM 1280
Query: 407 EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
+ ++ +I++ +++G F E + + D+ W ++ G +HG LGE
Sbjct: 1281 DGNILVGNGLINMYTKSGSFKEGNLVFEKIE-NKDLISWNTMVAGYGIHG---LGE 1332
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 121/268 (45%), Gaps = 45/268 (16%)
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK-----CLKLYKQMLCTGISPDCLTFP 141
+F ++++D Y M+R N S + K L+L+++M + + +T
Sbjct: 1197 IFLQLEKTDEYP---MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIA 1253
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
+L C + +G ++G VV+ + ++ V N +I+++ G ++F+++ N+
Sbjct: 1254 SVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENK 1313
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
D++SWN M+ GY G + A+ F +M K GF
Sbjct: 1314 DLISWNTMVAGYGIHGLGENAIRTFDQMIK----------DGF----------------- 1346
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV-HGYLRRSGLDCDVVIGTALVDMYGK 320
+PD +T +VLSAC++ G + G+ + ++ ++ + +VD+ G+
Sbjct: 1347 --------EPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGR 1398
Query: 321 CGCVERAYGVFKEMP-KKDTLAWTAMIS 347
G ++ A V K MP + + W A+++
Sbjct: 1399 AGLLQEASKVVKSMPVEPNACVWGALLN 1426
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 262/440 (59%), Gaps = 9/440 (2%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
K + ++++M +G+ P+ +T +L C + D G ++G V+ G+ ++FV ++++
Sbjct: 162 KGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALV 221
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI----F 235
SL+ C V ARM+FD M +RDVVSWN ++ Y ++ + + LF +M + +
Sbjct: 222 SLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEA 281
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
+WN++I G ++ GR+ EA+E+F++MQ KP++ITI+S+L AC++ + GK +
Sbjct: 282 TWNAVIGGCMENGRSEEAVEMFRKMQKMGF----KPNEITISSILPACSFSENLRMGKEI 337
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H Y+ R D+ TAL+ MY KCG + + VF M +KD +AW MI A++G G
Sbjct: 338 HCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNG 397
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
KEA F +M V+PN VTF G+LS C+HS LVE+G F M +LVEP HY+C
Sbjct: 398 KEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSC 457
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
++DI SRAG +EA + I+ MPMEP WGALL C+++ NVEL + A+ L +++P N
Sbjct: 458 VVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNN 517
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
YV+L ++ A + + + R LMKERGI K PGCS ++V VH F + +
Sbjct: 518 PGNYVSLFNILVTAKMWSEASQVRILMKERGITK-TPGCSWLQVGNKVHTFVVGDKSNIE 576
Query: 536 KEELVLILNGLSKIMKNGGF 555
+++ L+ L + MK G+
Sbjct: 577 SDKIYNFLDELVEKMKMAGY 596
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 204/476 (42%), Gaps = 91/476 (19%)
Query: 55 PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETN 114
P L TN L RL+ AL+V G + A +F +I + D T + +I S+ T
Sbjct: 4 PSLPTNIPSHLGLRLIRV-ALNV-GDFNRARQLFDNIPQPDPTTCSTLI------SALTT 55
Query: 115 DTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV 174
S + +K+Y + GI PD F K C D L V+ + GV DVFV
Sbjct: 56 HGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFV 115
Query: 175 QNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
N++I + C V AR +FD++ RDVVSW ++ Y++ G +D+FR M
Sbjct: 116 GNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREM----- 170
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
W+ VKP+ +T++S+L ACA L + GK
Sbjct: 171 -GWSG-----------------------------VKPNPMTVSSILPACAELKDLKSGKE 200
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
+HG+ R G+ ++ + +ALV +Y KC V A VF MP +D ++W +++ + N
Sbjct: 201 IHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKE 260
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
++ F F +M +GVR + T+ ++ C +G E+
Sbjct: 261 YEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEA--------------------- 299
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI----- 469
E R ++ M +P+ ++L C N+ +G+++ Y+
Sbjct: 300 ------------VEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKV 347
Query: 470 -DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
DL Y MYAK G + + ++M+ RK+V +++ + +H
Sbjct: 348 GDLTSTTALLY-----MYAKCGDLNLSRNVFDMMR----RKDVVAWNTMIIANAMH 394
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 148/362 (40%), Gaps = 82/362 (22%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG-- 79
PN + IL A E K+++ KEIH ++ H ++ L F C+ VS
Sbjct: 177 PNPMTVSSILP-ACAELKDLKSGKEIHGFAVR---------HGMVVNL-FVCSALVSLYA 225
Query: 80 ---SLSYATNVFSHIKRSDLYTYNIMIRA-----------------------------NA 107
S+ A VF + D+ ++N ++ A NA
Sbjct: 226 KCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNA 285
Query: 108 CKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG 167
+ S + ++++++M G P+ +T +L C+ + +G ++ V +
Sbjct: 286 VIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHW 345
Query: 168 VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFR 227
D+ +++ ++ CG + +R +FD M +DVV+WN MII G+
Sbjct: 346 KVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGN--------- 396
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG 287
+EAL LF +M S V+ P+ +T VLS C++
Sbjct: 397 ----------------------GKEALFLFDKMLLSRVQ----PNSVTFTGVLSGCSHSR 430
Query: 288 AIDHGKWVHGYLRRSGL-DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL-AWTAM 345
++ G + + R L + D + +VD+Y + G + AY + MP + T AW A+
Sbjct: 431 LVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGAL 490
Query: 346 IS 347
++
Sbjct: 491 LA 492
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/493 (35%), Positives = 278/493 (56%), Gaps = 48/493 (9%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
S++ L++ +LSV G+L YA +F I + D+ N ++R +A K +
Sbjct: 11 SVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA------QSMKPEKTVS 64
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
LY +M G+SPD TF F+LK C+K G + +G+VV+ G + +V+N++I
Sbjct: 65 LYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHA 124
Query: 184 ACG--------FVTSARM-----------------------LFDEMSNRDVVSWNAMIIG 212
CG F SA+ LFDEM +D V+WN MI G
Sbjct: 125 NCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITG 184
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
L+ ++D A +LF R ++++ +WN++I+G+V G +EAL +F+EM+ + PD
Sbjct: 185 CLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEH----PD 240
Query: 273 KITIASVLSACAYLGAIDHGKWVHGY-LRRSGLDCDVVIGT----ALVDMYGKCGCVERA 327
+TI S+LSACA LG ++ GK +H Y L + + + +GT AL+DMY KCG ++RA
Sbjct: 241 VVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRA 300
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF+ + +D W +I AL+ + + + + F EM+ V PN VTF+G++ AC+HS
Sbjct: 301 IEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHS 359
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
G V++GR F +MR +Y +EP++ HY CM+D+L RAG EA + SM +EP+ VW
Sbjct: 360 GRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRT 419
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
LLG C+++GNVELG+ + L+ + YV L ++YA G++D V+K R + + +
Sbjct: 420 LLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRV 479
Query: 508 RKEVPGCSSVEVD 520
+K G S +E D
Sbjct: 480 KKPT-GVSLIEED 491
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 269/479 (56%), Gaps = 42/479 (8%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S G ++YA +FS +L+ +N +IR + S + + LYK M GISP
Sbjct: 12 SPHGHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPIS------AIALYKDMFLCGISP 65
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
+ TF F+L C K L G ++ Q+VK G+ + + N +I L+ ACG
Sbjct: 66 NSYTFGFVLNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGC-------- 117
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
+D A +F M + + SW+++++G+ Q G+A E L+
Sbjct: 118 -----------------------MDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLK 154
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
L +EMQ+ E V D T+ASV+ C LG +D GKWVH Y+ + G+ DVV+GTALV
Sbjct: 155 LLREMQA----ENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALV 210
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
MY KCG ++ A VF+ M ++D W+ MI+ +A++G+ ++A F M+ + PN V
Sbjct: 211 GMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCV 270
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
TF +LSA +HSGLVEKG F M Y + P + HY CM+D+ RAG+ A + I++
Sbjct: 271 TFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQT 330
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP+EP+V +W LLG C+ HG LGE +++ ++ LDP + YV + ++YA GR+ V
Sbjct: 331 MPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSV 390
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
+ R+LMKE+ +K+ G SS+E++ +VH+F M +E++ +L+ +++ +K G
Sbjct: 391 CQVRSLMKEKAPKKQ-HGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQMARKLKQVG 448
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 286/518 (55%), Gaps = 50/518 (9%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
++ + C + G + A +F + ++ ++N MI A D + +KL+
Sbjct: 236 VSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAA------YVQDLQIDEAVKLF 289
Query: 126 KQMLCTGISP--DCLTFPFLLKECTK--RLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
K+ +P DC+++ ++ + +LD VY Q+ DV + +++S
Sbjct: 290 KE------TPYKDCVSWTTMINGYVRVGKLDE--AREVYNQMPY----KDVAAKTALMSG 337
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ G + A +F +++ RD + WN+MI GY +SG + AL+LFR+M +N SWN++I
Sbjct: 338 LIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMI 397
Query: 242 TGFVQGGRAREALELFQEMQSSSV---------------------------EEMVKPDKI 274
+G+ Q G A E+F+ M +V +E KPD+
Sbjct: 398 SGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQS 457
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T A LS+CA L A+ GK +H + +SG D+ + AL+ MY KCG V+ A VFK++
Sbjct: 458 TFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDI 517
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
D ++W ++IS +ALNGY EAF F +M +EG P+ VTF+G+LSAC+H+GL +G
Sbjct: 518 EGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGV 577
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M + +EP HY+C++D+L R G EA ++R M ++ + +WG+LL C++
Sbjct: 578 DLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRV 637
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
H N+ELG+ A L++L+P N + Y+ L +M+A+AGR++DV++ R LM+ER K +PGC
Sbjct: 638 HKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGK-LPGC 696
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
S +EV + F K+ E + +ILN LS M++
Sbjct: 697 SWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHMRD 734
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 129/537 (24%), Positives = 229/537 (42%), Gaps = 65/537 (12%)
Query: 4 KLQMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHH 63
KL + + S L V NK+ L + IDE K + + +I H
Sbjct: 2 KLNIGTRSTLEQSKNVFNQNKKIIYLGKQGKIDEAK------RVFSNVI---------HK 46
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
+ T + +G +S A +F + + +L ++N MI A ++ + H K
Sbjct: 47 NHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMI-AGYLHNNMVEEAH-----K 100
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
L+ M D ++ ++ C R L A ++V + D N++I+ +
Sbjct: 101 LFDLM----AERDNFSWALMIT-CYTRKGMLEKARELFELVPDKL--DTACWNAMIAGYA 153
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
G A +F++M +D+VS+N+M+ GY ++G + +A+ F RM +RN+ SWN ++ G
Sbjct: 154 KKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAG 213
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
FV A ELF+++ PD ++ V C G HGK V
Sbjct: 214 FVNNCDLGSAWELFEKI----------PDPNAVSWVTMLC---GFARHGKIVEARKLFDR 260
Query: 304 LDC-DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
+ C +VV A++ Y + ++ A +FKE P KD ++WT MI+ + G EA + +
Sbjct: 261 MPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVY 320
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
+M + V SGL++ GR L + + MI +
Sbjct: 321 NQMPYKDVAAKTALM---------SGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQ 371
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNL 482
+G SEA L R MP++ V W ++ G G ++ ++ + + N + +L
Sbjct: 372 SGRMSEALNLFRQMPVKNAV-SWNTMISGYAQAGEMDRATEIFEA---MGVRNVISWNSL 427
Query: 483 CDMYAKAGRFDDVKKTRNLMKERGIRKEVP--GCS--------SVEVDGVVHEFSMK 529
+ + G + D K+ LM + G + + CS +++V +HE +K
Sbjct: 428 ITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILK 484
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 272/484 (56%), Gaps = 21/484 (4%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG---KCLKLYKQMLCTGISP 135
G + A +VF + +N MI + HSG + +L+++M+ +
Sbjct: 242 GDVGAARSVFEEVDGKFDVVWNAMI---------SGYVHSGMAVEAFELFRRMVLERVPL 292
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVK----FGVCDDVFVQNSVISLFMACGFVTSA 191
D TF +L C G SV+GQ+++ F + V N++++ + CG + A
Sbjct: 293 DEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVA 352
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R +FD M+ +DVVSWN ++ GY+ S LD A+++F M +N SW +++G+V GG A
Sbjct: 353 RRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAE 412
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
+AL+LF +M+S E VKP T A ++AC LGA+ HGK +HG++ + G + G
Sbjct: 413 DALKLFNKMRS----ENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAG 468
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
AL+ MY +CG V+ A+ +F MP D+++W AMIS +G+G+EA + F M AEG+
Sbjct: 469 NALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIY 528
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ ++F+ +L+AC HSGLV++G F M+ + + P HY +ID+L RAG EA
Sbjct: 529 PDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARD 588
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
LI++MP EP +W A+L GC+ G++ELG A L + P + Y+ L + Y+ AG
Sbjct: 589 LIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGC 648
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+ D + R LM++RG++KE PGCS +E VH F + + E+ L + M+
Sbjct: 649 WVDAARVRKLMRDRGVKKE-PGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMR 707
Query: 552 NGGF 555
G+
Sbjct: 708 KLGY 711
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 219/491 (44%), Gaps = 90/491 (18%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLL--------------FFCA------------ 74
+R L+ +H +++ S L H L RL+ FCA
Sbjct: 37 LRALRCLHARLLTSALLHAPPHPHLTLRLIHLYTLSRDLPAAATLFCADPCPVSATSLVA 96
Query: 75 -LSVSGSLSYATNVFSHIK--RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
+ + L A + F + R D +N +I A A S H+ + +++ +L +
Sbjct: 97 AYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARAS------HAAPAVAVFRSLLAS 150
Query: 132 G-ISPDCLTFPFLLKECTKRLDGLVG--ASVYGQVVKFGVCDDVFVQNSVISLFMACG-- 186
G + PD +F LL + V A ++ V+K G + V N++++L+M C
Sbjct: 151 GSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESP 210
Query: 187 -FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
AR + DEM N+D ++W M++GY+R GD+ A +F + + WN++I+G+V
Sbjct: 211 EATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYV 270
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG-- 303
G A EA ELF+ M V E V D+ T SVLSACA +G HGK VHG + R
Sbjct: 271 HSGMAVEAFELFRRM----VLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPN 326
Query: 304 --LDCDVVIGTALVDMYGKCG-------------------------------CVERAYGV 330
+ + + ALV Y KCG C+++A V
Sbjct: 327 FVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEV 386
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F+EMP K+ L+W M+S + G+ ++A F +M +E V+P T+ G ++AC G +
Sbjct: 387 FEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGAL 446
Query: 391 EKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+ G+ H ++V E +I + +R G EA + MP D W
Sbjct: 447 KHGK-----QLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMP-NIDSVSWN 500
Query: 447 ALLGGCQMHGN 457
A++ HG+
Sbjct: 501 AMISALGQHGH 511
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 285/516 (55%), Gaps = 54/516 (10%)
Query: 52 IKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVF------SHIKRSDLYTYNIMIRA 105
I S L+ HH+ + F S ++ YA++V + D + +N +IRA
Sbjct: 141 IHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIRA 200
Query: 106 NACKSSETNDTHSGK-CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVV 164
A THS L+ Y M +SP+ TFPF+LK C + +G +V+ +V
Sbjct: 201 FA------QTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMV 254
Query: 165 KFGVCDDVFVQNSVISLFMAC-----GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
KFG +D V+N+++ ++ C SA+ +FDE +D V+W+AMI GY R+G+
Sbjct: 255 KFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNS 314
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
A+ LFR M+ +TG V PD+IT+ SV
Sbjct: 315 ARAVTLFREMQ----------VTG-------------------------VCPDEITMVSV 339
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
LSACA LGA++ GKW+ Y+ R + V + AL+DM+ KCG V+RA VF+EM +
Sbjct: 340 LSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTI 399
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++WT+MI A++G G EA F EM +GV P+ V F+G+LSAC+HSGLV+KG + F
Sbjct: 400 VSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNT 459
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M +++ + P + HY CM+D+LSRAG +EA +R+MP+EP+ +W +++ C G ++
Sbjct: 460 MENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELK 519
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LGE VA+ LI +P + + YV L ++YAK R++ K R +M +G+RK +PG + +E+
Sbjct: 520 LGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRK-IPGSTMIEM 578
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ ++EF +E+ ++ + + +K G+
Sbjct: 579 NNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGY 614
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 198/595 (33%), Positives = 296/595 (49%), Gaps = 93/595 (15%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
ID + +LK+IH +++ L LIT+L+ A S G +++A VF + R
Sbjct: 28 IDSATHKAQLKQIHARLL---VLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRP 82
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK----- 149
++ +N +IR + + H L +Y M +SPD TFP LLK C+
Sbjct: 83 QIFPWNAIIRGY------SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 150 ----------RL---------DGLVGASVYGQVVKFGVCDDVF-----------VQNSVI 179
RL +GL+ ++Y + + G VF +++
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLI--ALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 180 SLFMACGFVTSARMLFDEMSNRDV-VSWNAMI---------------------------- 210
S + G A +F +M DV W A++
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 211 ----------IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
Y + G + A LF +MK N+ WN++I+G+ + G AREA+++F EM
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
+ + V+PD I+I S +SACA +G+++ + ++ Y+ RS DV I +AL+DM+ K
Sbjct: 315 ----INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG VE A VF +D + W+AMI + L+G +EA +R ME GV PN VTF+GL
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
L AC HSG+V +G W F M + + P HYAC+ID+L RAG +A +I+ MP++P
Sbjct: 431 LMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
V VWGALL C+ H +VELGE AQ L +DP N YV L ++YA A +D V + R
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
MKE+G+ K+V GCS VEV G + F + EE+ + + +K GGF
Sbjct: 550 RMKEKGLNKDV-GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGF 603
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 313/590 (53%), Gaps = 87/590 (14%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
++E K +H ++K L + +++ L+ A G + A N+F + D+ ++N
Sbjct: 211 VKECKRVHGYVLK---LGFGSNTAVVNSLI--AAYFKFGGVESAHNLFDELSEPDVVSWN 265
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
MI N C + SG L+++ QML G+ D T +L C + +G +++
Sbjct: 266 SMI--NGC----VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALH 319
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACG--------FV-----------------------T 189
G VK ++V N+++ ++ CG FV +
Sbjct: 320 GFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYS 379
Query: 190 SARMLFDEMSN--------------------------RDVVSW-------------NAMI 210
A LFDEM + RDV S+ NA+I
Sbjct: 380 DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALI 439
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
Y + G ++ A +F ++ ++I SWN++I G+ Q EALELF +MQ + K
Sbjct: 440 NMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-----KQFK 494
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD IT+A VL ACA L A+D G+ +HG++ R G D+ + ALVDMY KCG + A +
Sbjct: 495 PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLL 554
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F +PKKD ++WT MI+ + ++G+G EA TF EM G+ P+ +F +L+AC+HSGL+
Sbjct: 555 FDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLL 614
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
+G F MR+ VEP + HYAC++D+L+R G S+A + I SMP++PD +WG LL
Sbjct: 615 NEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLS 674
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
GC++H +V+L EKVA+++ +L+P N +YV L ++YA+A ++++VKK R M++RG K+
Sbjct: 675 GCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGF-KQ 733
Query: 511 VPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIR 560
PGCS +EV G + F S +++ ++L+ L+ M+N + R
Sbjct: 734 NPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFR 783
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 229/490 (46%), Gaps = 88/490 (17%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
E K++ + K +H+ II + + +L +L+F G L +F I +
Sbjct: 106 EKKSLEDGKRVHSVIISN---GISVDEALGAKLVFM--YVNCGDLVQGRKIFDKIMNDKV 160
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+ +N+++ S + + + L+K+M G+ +C TF +LK C L +
Sbjct: 161 FLWNLLM------SEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLK-CFAALGKVKE 213
Query: 157 AS-VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
V+G V+K G + V NS+I+ + G V SA LFDE+S DVVSWN+MI G +
Sbjct: 214 CKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVV 273
Query: 216 SGDLDVALDLFRRM----------------------------------------KKRNIF 235
+G L++F +M + +F
Sbjct: 274 NGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVF 333
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSV-----------------------EEM---- 268
S N+++ + + G A E+F +M +++ +EM
Sbjct: 334 S-NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKG 392
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
V+PD T+ S++ ACA ++D G+ VH Y+ ++G+ ++ + AL++MY KCG VE A
Sbjct: 393 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 452
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF ++P KD ++W MI ++ N EA + F +M+ + +P+ +T +L ACA
Sbjct: 453 LVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLA 511
Query: 389 LVEKGRWCF-VMMRHVYLVEPHVYHYAC-MIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
++KGR ++R Y + HV AC ++D+ ++ GL A+ L +P + D+ W
Sbjct: 512 ALDKGREIHGHILRRGYFSDLHV---ACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWT 567
Query: 447 ALLGGCQMHG 456
++ G MHG
Sbjct: 568 VMIAGYGMHG 577
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 150/326 (46%), Gaps = 46/326 (14%)
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
++ Y+ GDL +F ++ +F WN +++ + + G RE++ LF++MQ
Sbjct: 135 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLG---- 190
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
V + T VL A LG + K VHGY+ + G + + +L+ Y K G VE A+
Sbjct: 191 VVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAH 250
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F E+ + D ++W +MI+ +NG+ + F +M GV + T V +L ACA+ G
Sbjct: 251 NLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIG 310
Query: 389 LVEKGR--------WCF---VMMRH-------------------VYLVEPHVYHYACMID 418
+ GR CF V+ + V + + + + +I
Sbjct: 311 NLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIA 370
Query: 419 ILSRAGLFSEAERL---IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD--- 472
R GL+S+A L ++S + PD++ +++ C +++ G V Y+I
Sbjct: 371 AYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGS 430
Query: 473 --PLNHAFYVNLCDMYAKAGRFDDVK 496
P+ +A L +MYAK G ++ +
Sbjct: 431 NLPVTNA----LINMYAKCGSVEEAR 452
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N+ I F + G R A+EL +S S E + + SVL CA +++ GK VH
Sbjct: 65 NAKINKFCEMGDLRNAIELLT--KSKSYELGLN----SYCSVLQLCAEKKSLEDGKRVHS 118
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
+ +G+ D +G LV MY CG + + +F ++ W ++S +A G +E
Sbjct: 119 VIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRE 178
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
+ F++M+ GV N TF +L A G V++ + H Y+++ ++
Sbjct: 179 SVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRV-----HGYVLKLGFGSNTAVV 233
Query: 418 DILSRA----GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ L A G A L + EPDV W +++ GC ++G
Sbjct: 234 NSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNG 275
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 266/477 (55%), Gaps = 42/477 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F + D+ ++N MI A S + L L++ M + P+
Sbjct: 209 GYMDRARQLFDEMPVKDVVSWNAMIAGYAQMG------RSKEALLLFEDMRKANVPPNES 262
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C + +G S+ + G+C ++ + N++I ++ CG
Sbjct: 263 TIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCG------------ 310
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
DL A +LF M +R++ SWN +I G+ +EAL LF+
Sbjct: 311 -------------------DLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFR 351
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM +S VE P +IT S+L +CA+LGAID GKW+H Y+ ++ + T+L+D+Y
Sbjct: 352 EMLASGVE----PTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLY 407
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + A VF M K +W AMI A++G +AF+ F +M ++G+ PN +TFV
Sbjct: 408 AKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFV 467
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+LSAC H+GLV+ G+ F M Y + P HY CMID+L RAGLF EAE L+++M +
Sbjct: 468 GILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEV 527
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+PD +WG+LLG C+ HG VELGE VA+ L +L+P N YV L ++YA AG++DDV +
Sbjct: 528 KPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARI 587
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R + +RG++K VPGC+++EVD VVHEF + E++ +L + + +K GF
Sbjct: 588 RTRLNDRGMKK-VPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGF 643
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 245/431 (56%), Gaps = 27/431 (6%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSL--ITRLLFFCALSVSGSLSYATNVFSHIK 92
+ +C+++R K+IH IIK T H++L +++L+ F A+S SG +SYA ++F+ I+
Sbjct: 36 LSKCQSIRTFKQIHAHIIK-----TGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIE 90
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
+L+ +N MIR + S L + +M+ +G+ P+ TFPFLLK C K
Sbjct: 91 EPNLFIWNSMIRGLSMSLS------PALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLAS 144
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
G ++ V+K G DVF+ S+I+++ G + +A+++FD+ + RD +S+ A+I G
Sbjct: 145 AHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAG 204
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y G +D A LF M +++ SWN++I G+ Q GR++EAL LF++M+ ++ V P+
Sbjct: 205 YALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKAN----VPPN 260
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+ TI SVLSACA A+D G + ++ GL ++ + AL+DMY KCG ++ A +F
Sbjct: 261 ESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFD 320
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
+M ++D ++W MI + KEA FREM A GV P +TF+ +L +CAH G ++
Sbjct: 321 DMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDL 380
Query: 393 GRWCFVMMRHVYLVE----PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
G+W H Y+ + +ID+ ++ G A ++ M ++ + W A+
Sbjct: 381 GKWI-----HAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIK-SLASWNAM 434
Query: 449 LGGCQMHGNVE 459
+ G MHG +
Sbjct: 435 ICGLAMHGQAD 445
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 164/420 (39%), Gaps = 98/420 (23%)
Query: 21 PPNKESTKLILR-----NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL 75
PPN+ + +L NA+D +MR E + C ++LI
Sbjct: 258 PPNESTIVSVLSACAQSNALDLGNSMRSWIED-----RGLCSNLKLVNALID------MY 306
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMI--RANACKSSETNDTHSGKCLKLYKQMLCTGI 133
S G L A +F + D+ ++N+MI + C E L L+++ML +G+
Sbjct: 307 SKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEA--------LALFREMLASGV 358
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
P +TF +L C +G ++ + K + S+I L+ CG + +AR
Sbjct: 359 EPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQ 418
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
+FD M + + SWNAMI G G D A +LF +M I
Sbjct: 419 VFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGI------------------- 459
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
+P++IT +LSAC + G +D G+ ++
Sbjct: 460 ----------------EPNEITFVGILSACKHAGLVDLGQQFF---------------SS 488
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
+V Y K + YG MI + G +EA + ME V+P+
Sbjct: 489 MVQDY-KISPKSQHYG--------------CMIDLLGRAGLFEEAESLLQNME---VKPD 530
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP-HVYHYACMIDILSRAGLFSEAERL 432
+ LL AC G VE G ++ ++ +EP + Y + +I + AG + + R+
Sbjct: 531 GAIWGSLLGACRDHGRVELGE---LVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARI 587
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 255/469 (54%), Gaps = 44/469 (9%)
Query: 60 NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
+ H +++ + SG++ A +F I D+ ++N MI A S
Sbjct: 127 SSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYK------ 180
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L+L+K+M+ T + PD T +L C + +G V+ + G ++ + N++I
Sbjct: 181 EALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALI 240
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
L+ CG V + A LF + +++ SWN+
Sbjct: 241 DLYSKCGQV-------------------------------ETACGLFEGLSCKDVVSWNT 269
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I G+ +EAL LFQEM S P+ +TI S+L ACA+LGAID G+W+H Y+
Sbjct: 270 LIGGYTHMNLYKEALLLFQEMLRSGE----SPNDVTIVSILPACAHLGAIDIGRWIHVYI 325
Query: 300 RRSGLDCDVV--IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
+ D + T+L+DMY KCG +E A+ VF M K +W AMI FA++G
Sbjct: 326 DKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANA 385
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
FD F M G+ P+ +TFVGLLSAC+HSG ++ GR F M Y + P + HY CMI
Sbjct: 386 GFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMI 445
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L +GLF EA+ +I++MPMEPD +W +LL C+ HGN+EL E A+ L+ ++P N
Sbjct: 446 DLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPG 505
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L ++YA AG +D+V K R L+ +G++K VPGCSS+E+D VHEF
Sbjct: 506 SYVLLSNIYATAGEWDEVAKVRALLNGKGMKK-VPGCSSIEIDSEVHEF 553
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 221/397 (55%), Gaps = 13/397 (3%)
Query: 67 TRLLFFCALSVS-GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
++LL FC LS YA +VF+ I+ + +N M+R A S + LKLY
Sbjct: 1 SKLLEFCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVS------ALKLY 54
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
M+ G+ P+ TFPFLLK C K G ++G V+K G D++V S+IS++
Sbjct: 55 VVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQN 114
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
G + A +FD S+RDVVS+ A+I GY SG++ A ++F + +++ SWN++I+G+
Sbjct: 115 GRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYA 174
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
+ G +EALELF+EM ++ V+PD+ T+ +VLSACA +++ G+ VH ++ G
Sbjct: 175 ETGSYKEALELFKEMMKTN----VRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFG 230
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
++ I AL+D+Y KCG VE A G+F+ + KD ++W +I + KEA F+EM
Sbjct: 231 SNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEM 290
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSRAG 424
G PN VT V +L ACAH G ++ GRW V + + + V +ID+ ++ G
Sbjct: 291 LRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCG 350
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
A ++ SM + + W A++ G MHG G
Sbjct: 351 DIEAAHQVFNSM-LHKSLSSWNAMIFGFAMHGRANAG 386
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 265/457 (57%), Gaps = 15/457 (3%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
+++T + S SG + A ++F I D+ ++ +I G+ L+
Sbjct: 249 NVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTII------DGYVQIERLGEALR 302
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGV-CDDVFVQNSVISLF 182
+Y+ ML TG+ P+ + L+ C + + G +G +V+ G C D F+Q ++I +
Sbjct: 303 MYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYD-FIQATIIHFY 361
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
ACG + A + F+ S V SWNA+I G++R+G ++ A LF M +R++FSW+S+I+
Sbjct: 362 AACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMIS 421
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
G+ Q + AL+LF EM + V+ P++IT+ SV SA A LG + G+W H Y+ +
Sbjct: 422 GYSQNEQPDLALQLFHEMVAGGVQ----PNEITMVSVFSAIATLGTLMEGRWAHEYILSN 477
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK--DTLAWTAMISVFALNGYGKEAFD 360
+ + + AL+DMY KCG + A +F E+ + W A+I A++G+ +
Sbjct: 478 SIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLK 537
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F +++ ++PN +TF+G+LSAC H+GLV+ G F M+++Y +EP++ HY CMID+L
Sbjct: 538 LFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLL 597
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
RAG EA +IR MPM+ DV +WG LL C+ HGNVE+GE+ A+ L LD + A V
Sbjct: 598 GRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRV 657
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
L ++YA AGR+DD R M+ + ++K PGCS V
Sbjct: 658 LLSNIYADAGRWDDAFLVRRAMQSQRMKKS-PGCSGV 693
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 217/465 (46%), Gaps = 54/465 (11%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SGSL A ++F + +Y M+ A + + + ++K M G+ P+
Sbjct: 131 SGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWL------EAIGVFKDMRFAGVIPNE 184
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T ++ + L ++ K G+ V +++ ++ C + +AR+LFDE
Sbjct: 185 VTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDE 244
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ R+VV+WN M+ GY +SG +D+A DLF R+ +++ SW +II G+VQ R EAL ++
Sbjct: 245 IPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMY 304
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+ M + V P+++ I ++SAC A+ G+ HG + R+G DC I ++
Sbjct: 305 RSMLRTG----VGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHF 360
Query: 318 YGKC-------------------------------GCVERAYGVFKEMPKKDTLAWTAMI 346
Y C G +E+A +F EMP++D +W++MI
Sbjct: 361 YAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMI 420
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
S ++ N A F EM A GV+PN +T V + SA A G + +GRW H Y++
Sbjct: 421 SGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWA-----HEYIL 475
Query: 407 EPHV----YHYACMIDILSRAGLFSEAERLIRSMPME-PDVFVWGALLGGCQMHGNVELG 461
+ A +ID+ ++ G + A +L + V W A++ G MHG+ +
Sbjct: 476 SNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVS 535
Query: 462 EKVAQYL--IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
K+ L + + P N ++ + AG D +K MK
Sbjct: 536 LKLFSQLQRVRIKP-NSITFIGVLSACCHAGLVDTGEKYFKGMKN 579
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 195/455 (42%), Gaps = 112/455 (24%)
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
LT LK C+ L G ++ V K G+ ++FV+NS+IS ++ C +++AR LFD
Sbjct: 53 LTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDT 112
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
S D VS N M+ GY++SG LD A LF +M + S+ +++ G Q EA+ +F
Sbjct: 113 CSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVF 172
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
++M+ + V P+++T+ASV+SA +++G I + + +H + GL+ ++ T LV M
Sbjct: 173 KDMRFAG----VIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHM 228
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK--------------------- 356
Y C + A +F E+P+++ + W M LNGY K
Sbjct: 229 YCVCSSLGNARVLFDEIPERNVVTWNVM-----LNGYSKSGLVDLARDLFERIPAKDVVS 283
Query: 357 ---------------EAFDTFREMEAEGVRPNHVTFVGLLSACA-----------HSGLV 390
EA +R M GV PN V V L+SAC H +V
Sbjct: 284 WGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIV 343
Query: 391 EKGRWCFVMMR----HVYLV---------------EPHVYHYACMIDILSRAGLFSEAER 431
G C+ ++ H Y + HV + +I R G+ +A +
Sbjct: 344 RTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQ 403
Query: 432 LIRSMPMEPDVFVWGALL---------------------GGCQMH--------------G 456
L MP E DVF W +++ GG Q + G
Sbjct: 404 LFDEMP-ERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLG 462
Query: 457 NVELGEKVAQYLIDLD-PLNHAFYVNLCDMYAKAG 490
+ G +Y++ PLN L DMYAK G
Sbjct: 463 TLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCG 497
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 46/271 (16%)
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC----------- 321
++T+ S L +C+ L A+ G+ +H + +SGL ++ + +L+ Y KC
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 322 --------------------GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
G ++ A +F++MP K +++T M+ A N EA
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM-----MRHVYLVEPHVYHYACM 416
F++M GV PN VT ++SA +H G + R + + + +V ++ H C+
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCV 231
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
L A + L +P E +V W +L G G V+L + + + D ++
Sbjct: 232 CSSLGNARV------LFDEIP-ERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVS- 283
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+ + D Y + R + + M G+
Sbjct: 284 --WGTIIDGYVQIERLGEALRMYRSMLRTGV 312
>gi|449507733|ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 442
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/429 (38%), Positives = 262/429 (61%), Gaps = 16/429 (3%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + +D CK+M ELK IH + L + ++ ++LL F ALS + L Y+ + +
Sbjct: 16 LISLLDGCKSMFELKRIHALLFT---LGISQDETIKSKLLLFSALSPARDLDYSYKLILN 72
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
+ + +N +IRA +N + + ++ +ML G+SPD LT+PFL+K +K
Sbjct: 73 VPNPTTFNWNTLIRAF------SNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKL 126
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
L+ +G +V+ +VK G D F+QNS+I ++ +C + SAR +FDEM +++V+WNAM+
Sbjct: 127 LNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAML 186
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY + GDL++A ++F M ++++ SW+S+I G+V+G EA+ LF+ M
Sbjct: 187 DGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDG----PM 242
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
+++T+ S L ACA+LGA++HG+ +H Y+ + L +V+ T+LVDMY KCG + A V
Sbjct: 243 ANEVTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTV 302
Query: 331 FK--EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
F+ + + D L W A+I A +G KEA + F EM+ G+ P+ +T++ LLS CAH G
Sbjct: 303 FRACSLQEADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGG 362
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
LVE+ + F +R ++ P V HYACM+D LSRAG SEA + + MP++P + GAL
Sbjct: 363 LVEEAWYFFDCLRKHGMI-PKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGAL 421
Query: 449 LGGCQMHGN 457
L GC HGN
Sbjct: 422 LSGCMKHGN 430
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 146/329 (44%), Gaps = 51/329 (15%)
Query: 173 FVQNSVISLFMACGFVTSAR----MLFD-EMSNRDVVSWNAMIIGYLRSG-DLDVALDLF 226
F+ ++ISL C + + +LF +S + + ++ L DLD + L
Sbjct: 11 FLNQTLISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLI 70
Query: 227 RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
+ F+WN++I F ++ +F +M ++ V PD +T ++ A + L
Sbjct: 71 LNVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKM----LQNGVSPDYLTYPFLVKATSKL 126
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
+ G VH ++ +SG + D I +L+ MY C + A VF EMP+K+ + W AM+
Sbjct: 127 LNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAML 186
Query: 347 SVFA--------------------------LNGYGK-----EAFDTFREMEAEGVRPNHV 375
+A ++GY K EA F M +G N V
Sbjct: 187 DGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEV 246
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH----VYHYACMIDILSRAGLFSEAER 431
T V L ACAH G +E GR M H Y+VE + ++D+ ++ G EA
Sbjct: 247 TLVSALCACAHLGALEHGR-----MMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALT 301
Query: 432 LIRSMPM-EPDVFVWGALLGGCQMHGNVE 459
+ R+ + E DV +W A++GG HG ++
Sbjct: 302 VFRACSLQEADVLIWNAIIGGLATHGLIK 330
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 301/543 (55%), Gaps = 29/543 (5%)
Query: 33 NAIDECKNMREL---KEIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVF 88
+++ C + L K++H Q+I+S PC+ +++ L C G A VF
Sbjct: 299 SSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMV-ELYAKC-----GCFKEARRVF 352
Query: 89 SHIKRSDLYTYNIMIRA---NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
S ++ + ++ ++I C S + L+L+ QM ++ D ++
Sbjct: 353 SSLRDRNTVSWTVLIGGFLQYGCFS---------ESLELFNQMRAELMTVDQFALATIIS 403
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
C+ R+D + ++ +K G V + NS+IS++ CG + +A +F M RD+VS
Sbjct: 404 GCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVS 463
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
W M+ Y + G++ A + F M RN+ +WN+++ ++Q G + L+++ M +
Sbjct: 464 WTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLT--- 520
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
E+ V PD +T ++ CA +GA G + G+ + GL D + A++ MY KCG +
Sbjct: 521 EKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRIS 580
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
A +F + +KD ++W AMI+ ++ +G GK+A + F +M +G +P+++++V +LS+C+
Sbjct: 581 EARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCS 640
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
HSGLV++G++ F M++ + V P + H++CM+D+L+RAG EA+ LI MPM+P VW
Sbjct: 641 HSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVW 700
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
GALL C+ HGN EL E A++L DLD + Y+ L +YA AG+ D + R LM+++
Sbjct: 701 GALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDK 760
Query: 506 GIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSME 565
GI+K PG S +EV VH F + V +++ I L ++M+ Y+R S+
Sbjct: 761 GIKKN-PGYSWMEVKNKVHVFK---AEDVSHPQVIAIREKLDELMEKIAQLGYVRTESLR 816
Query: 566 AQV 568
+++
Sbjct: 817 SEI 819
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 192/405 (47%), Gaps = 31/405 (7%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK--- 120
++IT + + GSLS A +F + R D+ ++N ++ + SG+
Sbjct: 94 NVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLM---------SGYYQSGRFLD 144
Query: 121 CLKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
++ + M +G S P+ TF +K C V + G + KFG D V ++
Sbjct: 145 AMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIV 204
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
+F+ CG V A F ++ V N+M+ GY +S +D AL+LF M +R++ SWN
Sbjct: 205 DMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNM 264
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+++ Q GRAREAL + +M + V+ D T S L+ACA L ++ GK +H +
Sbjct: 265 MVSALSQSGRAREALSVAVDMHNRG----VRLDSTTYTSSLTACAKLSSLGWGKQLHAQV 320
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
RS D + +A+V++Y KCGC + A VF + ++T++WT +I F G E+
Sbjct: 321 IRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESL 380
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC---- 415
+ F +M AE + + ++S C++ R + R ++ + H
Sbjct: 381 ELFNQMRAELMTVDQFALATIISGCSN-------RMDMCLARQLHSLSLKSGHTRAVVIS 433
Query: 416 --MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+I + ++ G AE + SM E D+ W +L GN+
Sbjct: 434 NSLISMYAKCGNLQNAESIFSSME-ERDIVSWTGMLTAYSQVGNI 477
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 223/489 (45%), Gaps = 91/489 (18%)
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR-MLFDEMSNRD 202
L+ C R +++G++V G+ VF+QN+++ +++CG + AR +L +++ +
Sbjct: 35 LRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPN 94
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
V++ N M+ GY + G L A +LF RM +R++ SWN++++G+ Q GR +A+E F M+
Sbjct: 95 VITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRR 154
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
S P+ T + +C LG + + G L + G D + T +VDM+ +CG
Sbjct: 155 SGDS---LPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211
Query: 323 CVE-------------------------RAYGV------FKEMPKKDTLAWTAMISVFAL 351
V+ ++YGV F+ MP++D ++W M+S +
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHVYLVEPHV 410
+G +EA +M GVR + T+ L+ACA + G+ ++R + ++P+V
Sbjct: 272 SGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYV 331
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG----NVELGEKVAQ 466
+ M+++ ++ G F EA R+ S+ + + W L+GG +G ++EL ++
Sbjct: 332 --ASAMVELYAKCGCFKEARRVFSSLR-DRNTVSWTVLIGGFLQYGCFSESLELFNQMRA 388
Query: 467 YLIDLDPLNHAFYVNLC--------------------------------DMYAKAGRFDD 494
L+ +D A ++ C MYAK G +
Sbjct: 389 ELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQN 448
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK---IMK 551
+ + M+ER I V G++ +S G+ +E +G+S I
Sbjct: 449 AESIFSSMEERDI---------VSWTGMLTAYSQVGNIGKARE----FFDGMSTRNVITW 495
Query: 552 NGGFGQYIR 560
N G YI+
Sbjct: 496 NAMLGAYIQ 504
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 103/268 (38%), Gaps = 40/268 (14%)
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG----- 329
+A L +C GA+ + +HG L GL V + L+ Y CG + A G
Sbjct: 30 ALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGD 89
Query: 330 ---------------------------VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
+F MP++D +W ++S + +G +A ++F
Sbjct: 90 ITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESF 149
Query: 363 REMEAEGVR-PNHVTFVGLLSACAHSGLVEKG-RWCFVMMRHVYLVEPHVYHYACMIDIL 420
M G PN TF + +C G E + ++ + + +P V ++D+
Sbjct: 150 VSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDV--ATGIVDMF 207
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
R G A + + P VF ++L G V+ ++ + + + D ++ V
Sbjct: 208 VRCGAVDFASKQFSQIE-RPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMV 266
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIR 508
+ +++GR + M RG+R
Sbjct: 267 S---ALSQSGRAREALSVAVDMHNRGVR 291
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/588 (30%), Positives = 298/588 (50%), Gaps = 79/588 (13%)
Query: 13 LNSPAKVSPPNKESTKLILRNAIDE---CKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
+ S V P+ S++ I + + C N+ ++K++H QII+ N H L
Sbjct: 1 MTSSLPVRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRR-----NLHQDLHIAP 55
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
ALS+ + A VF+ ++ +++ N +IRA+A S + ++ +M
Sbjct: 56 KLISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAHALNSQPY------QAFFVFSEMQ 109
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF-- 187
G+ D T+PFLLK C+ V ++ + K G+ D++V N++I + CG
Sbjct: 110 RFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLG 169
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
V A LF++MS RD VSWN+M+ G +++G+L A LF M +R++ SWN+++ G+ +
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARC 229
Query: 248 GRAREALELFQ-----------------------EMQSSSVEEMVKPDKITIASVLSACA 284
A ELF+ EM ++M P K + +
Sbjct: 230 REMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAG 289
Query: 285 YL-------------------------------------GAIDHGKWVHGYLRRSGLDCD 307
Y G + G H +++S L+ +
Sbjct: 290 YAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSN 349
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+ AL+DMY KCG +++A+ VF +MPKKD ++W M+ ++G+GKEA + F M
Sbjct: 350 ASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRK 409
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
EG+ P+ VTF+ +L +C H+GL+++G F M VY + P V HY C++D+L R G
Sbjct: 410 EGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLK 469
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
EA +++++MPMEP+V +WGALLG C+MH V++ ++V L+ LDP + Y L ++YA
Sbjct: 470 EAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYA 529
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM--KGSPK 533
A ++ V R+ MK G+ K G SSVE++ +HEF++ K PK
Sbjct: 530 AAEDWEGVADIRSKMKSMGVEKP-SGASSVELEDGIHEFTVFDKSHPK 576
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 163/431 (37%), Positives = 254/431 (58%), Gaps = 9/431 (2%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDG--LVGASVYGQVVKFGVC-DDVFVQNSVISL 181
+ M G+ P+ +TF LL C G +G ++G K G+ V V +++ +
Sbjct: 6 FSDMRFAGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGM 65
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ G AR++FD M +++ V+WN MI GY+RSG ++ A+ LF M R++ SW +++
Sbjct: 66 YSKRGRFRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMV 125
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
GFV+ G EAL F+EMQ S V KPD + I + L+AC LGA+ G W+H Y+
Sbjct: 126 NGFVKKGFHEEALSWFREMQISGV----KPDYVAIIAALAACTNLGALSFGLWIHRYVMS 181
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
+V + +L+D+Y +CGCVE A VF +M K+ ++W ++I FA NG E+
Sbjct: 182 QDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLFY 241
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR+M+ EG +P+ VTF G L+AC+H GLVE+G F M+ Y + P + HY C++D+ S
Sbjct: 242 FRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYS 301
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG-NVELGEKVAQYLIDLDPLNHAFYV 480
RAG +A ++++SMPM+P+ V G+LL C+ HG N L E++ ++L DL+ +H+ YV
Sbjct: 302 RAGRLEDALKVVQSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSHSNYV 361
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELV 540
L +MYA G+++ K R MK G++K+ PG SS+E+D H F S V +
Sbjct: 362 ILSNMYAADGKWEGASKMRRKMKGLGLKKQ-PGFSSIEIDECTHVFMAGDSAHVETANIR 420
Query: 541 LILNGLSKIMK 551
IL +S ++
Sbjct: 421 EILGLMSSDLR 431
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 42/261 (16%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SG ++ A +F + DL ++ M+ K + L +++M +G+ PD
Sbjct: 100 SGQVNTAVKLFDEMLNRDLISWTAMVNGFVKKGFHE------EALSWFREMQISGVKPDY 153
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+ L CT G ++ V+ ++V V NS+I L+ CG V AR +FD+
Sbjct: 154 VAIIAALAACTNLGALSFGLWIHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDK 213
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M R VVSWN++I+G+ +G+ A E+L F
Sbjct: 214 MEKRTVVSWNSVIVGFAANGN-------------------------------AHESLFYF 242
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVD 316
++MQ EE KPD +T L+AC+++G ++ G ++ R + + +VD
Sbjct: 243 RKMQ----EEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVD 298
Query: 317 MYGKCGCVERAYGVFKEMPKK 337
+Y + G +E A V + MP K
Sbjct: 299 LYSRAGRLEDALKVVQSMPMK 319
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 167/432 (38%), Positives = 256/432 (59%), Gaps = 13/432 (3%)
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDG--LVGASVYGQVVKFGVC-DDVFVQNSVI 179
K + M G+ P+ +TF LL C G +G ++G K G+ V V +++
Sbjct: 51 KEFSSMRLAGVEPNHITFIALLSGCGDVSSGSEALGDLLHGYACKLGLDRTHVMVGTAIL 110
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
++ G AR++FD M +++ V+WN MI GY+RSG ++ A+ LF M +R++ SW +
Sbjct: 111 GMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTA 170
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I GFV+ G EAL F+EMQ S V KPD + I + L+AC +LGA+ G WVH Y+
Sbjct: 171 MINGFVKKGFHEEALAWFREMQISGV----KPDYVAIIAALAACTHLGALSFGLWVHRYV 226
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
++ + +L+D+Y +CGCVE A VF +M K+ ++W ++I FA NG E+
Sbjct: 227 MNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESL 286
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
FR+M+ EG +P+ VTF G L+AC+H GLVE+G F M+ + + P + HY C++D+
Sbjct: 287 VYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDL 346
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN-VELGEKVAQYLIDLDPLNHAF 478
SRAG +A +++SMPM+P+ V G+LL C+ HGN L E++ ++L DL+ +H+
Sbjct: 347 YSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRNHGNNTVLAERLVKHLSDLNVKSHSN 406
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKV---- 534
YV L +MYA G ++ K R MK G++K+ PG SSVE+D H F S V
Sbjct: 407 YVILSNMYAADGIWEGASKMRRKMKGLGLKKQ-PGFSSVEIDDCTHVFMAGDSAHVETAY 465
Query: 535 VKEELVLILNGL 546
++E L LI + L
Sbjct: 466 IREVLELISSDL 477
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 141/330 (42%), Gaps = 77/330 (23%)
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL--GAIDHGK 293
SW S IT + GR EA + F M+ + VE P+ IT ++LS C + G+ G
Sbjct: 32 SWTSRITLLSRNGRLAEAAKEFSSMRLAGVE----PNHITFIALLSGCGDVSSGSEALGD 87
Query: 294 WVHGYLRRSGLD-CDVVIGTALVDMYGK-------------------------------C 321
+HGY + GLD V++GTA++ MY K
Sbjct: 88 LLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYMRS 147
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G V A +F EMP++D ++WTAMI+ F G+ +EA FREM+ GV+P++V + L
Sbjct: 148 GQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAAL 207
Query: 382 SACAHSGLVEKGRW----------------------------CFVMMRHVY--LVEPHVY 411
+AC H G + G W C R V+ + + V
Sbjct: 208 AACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVV 267
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ +I + G E+ R M E PD + L C G VE G + Q +
Sbjct: 268 SWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTM 327
Query: 469 I---DLDP-LNHAFYVNLCDMYAKAGRFDD 494
+ P + H Y L D+Y++AGR +D
Sbjct: 328 KRDHRISPRIEH--YGCLVDLYSRAGRLED 355
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 42/261 (16%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SG ++ A +F + DL ++ MI K + L +++M +G+ PD
Sbjct: 147 SGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHE------EALAWFREMQISGVKPDY 200
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+ L CT G V+ V+ +++ V NS+I L+ CG V AR +FD+
Sbjct: 201 VAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDK 260
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M R VVSWN++I+G+ +G+ A E+L F
Sbjct: 261 MEKRTVVSWNSVIVGFAANGN-------------------------------AHESLVYF 289
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVD 316
++MQ EE KPD +T L+AC+++G ++ G ++ R + + LVD
Sbjct: 290 RKMQ----EEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVD 345
Query: 317 MYGKCGCVERAYGVFKEMPKK 337
+Y + G +E A V + MP K
Sbjct: 346 LYSRAGRLEDALNVVQSMPMK 366
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
+ + T++WT+ I++ + NG EA F M GV PNH+TF+ LLS C G V
Sbjct: 22 LNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGC---GDV 78
Query: 391 EKGRWCFVMMRHVY-----LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
G + H Y L HV ++ + S+ G F +A RL+ + + W
Sbjct: 79 SSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKA-RLVFDFMEDKNSVTW 137
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
++ G G V K+ + + D ++ +N
Sbjct: 138 NTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMIN 173
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 285/522 (54%), Gaps = 47/522 (9%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS-VSGSLSYATNVFSHIKR 93
I +C ++REL +I IKS S + +L+ FC S S+SYA ++F +
Sbjct: 36 ISKCNSLRELMQIQAYAIKSHIEDV----SFVAKLINFCTESPTESSMSYARHLFEAMSE 91
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
D+ +N M R + T+ + L+ ++L GI PD TFP LLK C
Sbjct: 92 PDIVIFNSMARG------YSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKAL 145
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G ++ +K G+ D+V+V ++I+++ C V SAR +FD
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFD----------------- 188
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
R+ + + +N++ITG+ + R EAL LF+EMQ + +KP++
Sbjct: 189 --------------RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQG----KYLKPNE 230
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
IT+ SVLS+CA LG++D GKW+H Y ++ V + TAL+DM+ KCG ++ A +F++
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEK 290
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M KDT AW+AMI +A +G +++ F M +E V+P+ +TF+GLL+AC+H+G VE+G
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEG 350
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R F M + + P + HY M+D+LS AG +A I +P+ P +W LL C
Sbjct: 351 RKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACS 410
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
H N++L EKV++ + +LD + YV L ++YA+ +++ V R +MK+R K VPG
Sbjct: 411 SHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVK-VPG 469
Query: 514 CSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
CSS+EV+ VVHEF K +L L+ + K +K G+
Sbjct: 470 CSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGY 511
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 292/601 (48%), Gaps = 83/601 (13%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
PP L + + C++ + H ++ S L + LL SV G+
Sbjct: 3 PPCPAVALPTLLSRLRACRSASHAIQCHALLLTSGHLAASPLRLSNLLLLAIA--SVPGA 60
Query: 81 LSYATNVFSHIKRS---DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
A VF+ + D + +N IR +A L + +M G+ PD
Sbjct: 61 APLADAVFARLPEPAARDPFPWNTAIRLHAPGRPRA-------ALLYFARMRSCGVRPDA 113
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV----------------------- 174
TFP +LK C G V+ + V+ G+ D+F
Sbjct: 114 YTFPAVLKACGCAPGCRAGLLVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFDE 173
Query: 175 ----------QNSVISLFMACG---------------------------------FVTSA 191
NS+++ ++ CG V A
Sbjct: 174 AGGVSRDLVSWNSMVAGYVGCGEMGLAQELFDEMPQRDAFSWGALIDGYGKQGGAGVDRA 233
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R LFD+M+ RD+V WN+MI GY R G +D A LF M +RN+ SW+ +I G V+ G A+
Sbjct: 234 RELFDQMTERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAK 293
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EALE FQ M + +PD++ +SACA LGA++ G+W+H YL + + DVV+
Sbjct: 294 EALEHFQSMLRCGI----RPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQ 349
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
TAL+DMY KCG ++ A +F+ MP++ + W MI +GYG +A F MEAE V
Sbjct: 350 TALIDMYMKCGRMDLAMLIFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVA 409
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
+ ++ + +L+AC H+GLV +G F M+ + ++P V HY ++D+L RAG +A
Sbjct: 410 VDDLSLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARH 469
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
I +MPMEP +WG+LL C+ H VEL E + L +L + YV L ++YA G
Sbjct: 470 AIETMPMEPTPELWGSLLAACRSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGM 529
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
+ DV + R LM + G+RK++ G S +EVDG +HEF G + +E+ L+L LSK++
Sbjct: 530 WGDVLRIRKLMSDEGMRKDI-GRSVIEVDGEIHEFVNGGGSHLCTDEIYLMLWNLSKMVA 588
Query: 552 N 552
+
Sbjct: 589 S 589
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 236/385 (61%), Gaps = 4/385 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DV + N ++S ++ G + +AR LFD M + DV+SWN ++ GY +G++++ + +F M
Sbjct: 55 DVVLWNVIVSGYIELGDMVAARELFDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEEMP 114
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
RN++SWN +I G+V+ G +EALE F+ M V+ +V P+ T+ +VLSAC+ LG ++
Sbjct: 115 ARNVYSWNGLIGGYVRNGLFKEALECFKRML---VDGVVVPNDYTVVAVLSACSRLGDLE 171
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
GKWVH Y G ++ +G AL+DMY KCG +E+A VF + KD + W +I+ A
Sbjct: 172 IGKWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLA 231
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
++ + +A F M+ G RP+ VTFVG+LSAC H GLV G F M YL+ P +
Sbjct: 232 MHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMGLVRNGFLHFQSMVDDYLIVPQI 291
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+D+L RAGL ++A ++R MPMEPDV +W ALLG C+ + NVE+ E Q LI+
Sbjct: 292 EHYGCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALLGACRXYKNVEMAELALQRLIE 351
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
L+P N +V L ++Y GR DV + + M++ G RK VPGCS + + V EF
Sbjct: 352 LEPNNPGNFVMLSNIYKDLGRSQDVARLKVAMRDTGFRK-VPGCSVIGCNDSVVEFYSLD 410
Query: 531 SPKVVKEELVLILNGLSKIMKNGGF 555
+ + L GL+ ++++ G+
Sbjct: 411 ERHPETDSIYRALQGLTILLRSHGY 435
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 121/277 (43%), Gaps = 54/277 (19%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PD 136
+G + VF + ++Y++N +I + + L+ +K+ML G+ P+
Sbjct: 100 NGEVELFVKVFEEMPARNVYSWNGLI------GGYVRNGLFKEALECFKRMLVDGVVVPN 153
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
T +L C++ D +G V+ G ++FV N++I ++ CG + A +FD
Sbjct: 154 DYTVVAVLSACSRLGDLEIGKWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFD 213
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
+ +D+++W N+II A +AL L
Sbjct: 214 GLDVKDIITW-------------------------------NTIINSLAMHXHAADALSL 242
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA--- 313
F+ M+ + +PD +T +LSAC ++G + +G+L + D +I
Sbjct: 243 FEGMKRAG----ERPDGVTFVGILSACTHMGLVR-----NGFLHFQSMVDDYLIVPQIEH 293
Query: 314 ---LVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
+VD+ G+ G + +A + ++MP + D + W A++
Sbjct: 294 YGCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALL 330
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 180/489 (36%), Positives = 275/489 (56%), Gaps = 48/489 (9%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
+M E K++H ++K ++ L+ CAL+ GS+ YA ++F+ I + Y
Sbjct: 10 HMEEFKQVHAHVLKCGIFFDT---FCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDY 66
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV--GA 157
N MIR N ND + L LY M+ G+ PD T+PF+LK C+ L G+V G
Sbjct: 67 NTMIRGN------VNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACS--LLGVVDEGI 118
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
V+G V K G+ DV VQNS+I+++ C G
Sbjct: 119 QVHGHVFKMGLEGDVIVQNSLINMYGKC-------------------------------G 147
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
++ A D+F M ++++ SW++II E L L +M S E + ++ T+
Sbjct: 148 EIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSS---EGRCRVEESTLV 204
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
+VLSAC +LG+ D GK +HG L R+ + +VV+ T+L+DMY K GC+E+ VFK M +K
Sbjct: 205 NVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEK 264
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+ ++T MIS A++G GKEA F EM EG+ P+ V +VG+ SAC+H+GLVE+G CF
Sbjct: 265 NRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCF 324
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
M+ + +EP V HY CM+D+L R G+ EA LI+SM ++P+ +W +LL C++H N
Sbjct: 325 KSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHN 384
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
+E+G+ A+ L L+ N Y+ L +MYAKA ++DDV K R + ER + + PG S +
Sbjct: 385 LEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLV-QTPGFSLI 443
Query: 518 EVDGVVHEF 526
E V++F
Sbjct: 444 EAKRKVYKF 452
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 161/430 (37%), Positives = 253/430 (58%), Gaps = 11/430 (2%)
Query: 127 QMLCTGISPDCLTFPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
+ML G+ P T L C GL +G +++ K + D +V +++ ++
Sbjct: 123 EMLGRGLIPTSHTLSSSLPAC----HGLALGRALHAYAFKLALAGDSYVATALLGMYARG 178
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
G +AR LFDEM + VV AM+ Y + G LD A +LF M ++ WN++I G+
Sbjct: 179 GDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYT 238
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG-L 304
Q GR EAL LF+ M S V+ PD++ I LSA A LG + G+W+H Y++ S +
Sbjct: 239 QHGRPNEALRLFRWMLRSGVD----PDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRV 294
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
+ +GTAL+DMY KCG +E A VF + KD + W AMI+ +A++G ++A + F +
Sbjct: 295 QLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQ 354
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
+ ++G+ P +TF+GLL+AC+HSGLV++G F M Y + P + HY CM+D+L RAG
Sbjct: 355 LRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAG 414
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
L EA L++SM + PD +W +LL C++H N+ LG+++A YL+ N Y+ L +
Sbjct: 415 LIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSN 474
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
+YA G +++V + R++MK GI+KE PGCS++EV V+EF +E+ +L
Sbjct: 475 IYAAVGNWEEVARVRSMMKASGIQKE-PGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLE 533
Query: 545 GLSKIMKNGG 554
++ I+K G
Sbjct: 534 KMNGIVKEQG 543
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 161/430 (37%), Positives = 253/430 (58%), Gaps = 11/430 (2%)
Query: 127 QMLCTGISPDCLTFPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
+ML G+ P T L C GL +G +++ K + D +V +++ ++
Sbjct: 122 EMLGRGLIPTSHTLSSSLPAC----HGLALGRALHAYAFKLALAGDSYVATALLGMYARG 177
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
G +AR LFDEM + VV AM+ Y + G LD A +LF M ++ WN++I G+
Sbjct: 178 GDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYT 237
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG-L 304
Q GR EAL LF+ M S V+ PD++ I LSA A LG + G+W+H Y++ S +
Sbjct: 238 QHGRPNEALRLFRWMLRSGVD----PDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRV 293
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
+ +GTAL+DMY KCG +E A VF + KD + W AMI+ +A++G ++A + F +
Sbjct: 294 QLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQ 353
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
+ ++G+ P +TF+GLL+AC+HSGLV++G F M Y + P + HY CM+D+L RAG
Sbjct: 354 LRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAG 413
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
L EA L++SM + PD +W +LL C++H N+ LG+++A YL+ N Y+ L +
Sbjct: 414 LIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSN 473
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
+YA G +++V + R++MK GI+KE PGCS++EV V+EF +E+ +L
Sbjct: 474 IYAAVGNWEEVARVRSMMKASGIQKE-PGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLE 532
Query: 545 GLSKIMKNGG 554
++ I+K G
Sbjct: 533 KMNGIVKEQG 542
>gi|414591101|tpg|DAA41672.1| TPA: hypothetical protein ZEAMMB73_535355 [Zea mays]
Length = 502
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 284/538 (52%), Gaps = 51/538 (9%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
++PP+ +LR + ++H Q + L +L T L+ S
Sbjct: 1 MTPPSSGRLSALLRRCAAS-GALSPGAQLHAQALVGGRLPDT---TLDTDLVLL--YSRC 54
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G+L A VF + ++ YN+++ A+ ++ +KL +++ +G+ PD
Sbjct: 55 GALHRAREVFDGMPSPSMHAYNVLLAASPPDAA----------VKLVSRLVASGLRPDRY 104
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+ P +L+ C + D L+G+ ++G V+ G+ +V V +++ +
Sbjct: 105 SVPAVLRACAESRDALLGSVLHGFAVRLGLLANVVVSGALLDM----------------- 147
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
Y ++G L A +F M +R+ +WN ++TG+ + GR+ E LELF+
Sbjct: 148 --------------YAKTGTLGDAGRVFDEMPERDAVAWNCMVTGYARAGRSEETLELFR 193
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDM 317
+ Q S + D + SVL+ CA G + G+ +HG + R D V+G AL+DM
Sbjct: 194 KAQIESAG--MARDLRAVPSVLNVCADEGQLMKGREIHGRMARCLASSSDTVVGNALIDM 251
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
YGKCG V+ A VF M +K+ ++W+++IS + ++G GKEA + EM + GV+PN VTF
Sbjct: 252 YGKCGQVDGAQAVFASMEEKNVVSWSSLISCYGVHGMGKEALRVYEEMVSVGVKPNCVTF 311
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V +LS+C+HSGLV GR F MR V+ VEP HYACM+D+L RAG EA L+ MP
Sbjct: 312 VSILSSCSHSGLVSDGRRIFESMRKVHAVEPTADHYACMVDLLGRAGAIEEAVGLVNEMP 371
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
MEP +WGALL C +H NV++GE A L +L+ N + YV LC +Y GR D V
Sbjct: 372 MEPGASLWGALLSACAIHNNVDVGEVAAYRLFELEEDNASNYVTLCGIYDAIGRSDSVAG 431
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R+ M+E G+ K PGCS V V G + F P+ ++ +++ +L L + M G+
Sbjct: 432 LRSRMRELGMVK-TPGCSWVHVKGRAYAFYQGCVPRYLRRQMLRVLGHLLEDMAGSGY 488
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 179/520 (34%), Positives = 288/520 (55%), Gaps = 54/520 (10%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF + ++N M+ A D H ++++ M G+ P+ +
Sbjct: 184 GRMDDARKVFERMAVRSCVSWNTMVSGYALNY----DCHGAS--EMFRMMGSAGLEPNLV 237
Query: 139 TFPFLLK---ECTKRLDGL----------VGAS----------------------VYGQV 163
T+ LL C + ++ + +GA+ ++G V
Sbjct: 238 TWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYV 297
Query: 164 VKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
VK G + +FV+NS+I L+ G V +AR+LF E+ +++VSWNA+I Y G D A
Sbjct: 298 VKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAF 357
Query: 224 DLFRRMKKR--------NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
+F +++K N+ SW+++I GF G+ EALELF+ MQ + V K + +T
Sbjct: 358 AIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKV----KANSVT 413
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
IASVLS CA L A+ G+ +HG++ RS +D ++++G L++MY K G + VF+++
Sbjct: 414 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE 473
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
KD ++W M++ + ++G G+ A TF +M +G P+ VTFV +LSAC+H+GLV +GR
Sbjct: 474 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 533
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M + VEP + HYACM+D+L RAGL EA ++++SMP+EP+ VWGALL C+MH
Sbjct: 534 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMH 593
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
N E+ E+ A + +L+ Y+ L ++YA +GR++D K R K +G++K PG S
Sbjct: 594 KNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKK-TPGQS 652
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++V V+ FS + EE+ IL L M+ G+
Sbjct: 653 WIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGY 692
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 223/490 (45%), Gaps = 71/490 (14%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PN + + + +C ++IH+QII T H S + G +
Sbjct: 29 PNNDVLDF-FNDLLQQCSKSHLSQQIHSQIIV-----TGSHRSAFLAARVVSVYAGFGLV 82
Query: 82 SYATNVF--SHIK-RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
S A VF S I+ S+L +N ++RAN + + L++Y +M G+S D
Sbjct: 83 SDAQRVFEVSPIECFSNLLLWNSILRANVAHG------YCEEALEIYCRMRKLGVSADGF 136
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TFP +++ C + SV+G VV+ G ++ V N ++ ++ G + AR +F+ M
Sbjct: 137 TFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERM 196
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK----KRNIFSWNSIITGFVQGGRAREAL 254
+ R VSWN M+ GY + D A ++FR M + N+ +W S+++ + G+ E +
Sbjct: 197 AVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETM 256
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
ELF M+ + + +A VLS L A D GK +HGY+ + G + + + +L
Sbjct: 257 ELFGRMRMRGIGATAE----ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSL 312
Query: 315 VDMYGKCGCV-------------------------------ERAYGVFKEMPKKD----- 338
+ +YGK G V + A+ +F ++ K D
Sbjct: 313 ICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMV 372
Query: 339 ---TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
++W+A+I FA G G+EA + FR M+ V+ N VT +LS CA + GR
Sbjct: 373 RPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGR- 431
Query: 396 CFVMMRHVY--LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
+ HV L++ ++ +I++ +++G F E + + D+ W ++ G
Sbjct: 432 --EIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE-NKDLISWNTMVAGYG 488
Query: 454 MHGNVELGEK 463
+HG LGE
Sbjct: 489 IHG---LGEN 495
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 260/457 (56%), Gaps = 11/457 (2%)
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCT-GISPDCLTFPFLLKECTKRLDGLVGASVY 160
+I N+ S + + +++ ML GI PD T +L C + G ++
Sbjct: 398 LISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIH 457
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
Q + G+ D FV +++ ++ C +T+A++ FDE+ +DV +WNA+I GY RS ++
Sbjct: 458 AQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIE 517
Query: 221 VALDLFRRMK----KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
L +MK NI++WNSI+ G V+ + ++LF EMQ S + +PD T+
Sbjct: 518 RIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKL----RPDIYTV 573
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+L AC+ L ++ GK H + + G D DV IG ALVDMY KCG ++ A + +
Sbjct: 574 GIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISN 633
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
+ ++ AM++ A++G+G+E F+ M A G P+HVTF+ +LS+C H G VE G
Sbjct: 634 PNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETGCEF 693
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F +M + Y V+P + HY M+D+LSR+G EA LI+ MP+E D +WGALLGGC HG
Sbjct: 694 FDLMGY-YNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHG 752
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
N+ELGE A+ LI+L+P N YV L +++A A R+ D+ + R +MK+RG+ K PGCS
Sbjct: 753 NIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARVRGMMKDRGMHKS-PGCSW 811
Query: 517 VEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNG 553
+E +H F EE+ L+ L+ MK G
Sbjct: 812 IEDKNEIHSFLACDRSHKRAEEIYATLDYLALHMKTG 848
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 227/509 (44%), Gaps = 74/509 (14%)
Query: 14 NSPAKVSPPNKESTKLILRN----------AIDECKNMRELKEIHTQIIKSPCLQTNDHH 63
+ P +S S +L N +D CK + K++H IK+ D
Sbjct: 38 HQPVNISQQKNRSNFSLLDNKPLNTSKYASVLDSCKCPKLGKQVHAHTIKTGF----DAD 93
Query: 64 SLI-TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
I T+LL A G L A +F + +L+++ ++ S + +
Sbjct: 94 GFIDTKLLQMYARC--GLLKDADFLFETMPMRNLHSWKAIL------SVYLDHGLFEEAF 145
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
L++ + G+ D FP + K C+ +G ++G V+KF C +++V N++I ++
Sbjct: 146 LLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMY 205
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK-----RNIFSW 237
CG + A+ + +M RD V+WN++I +G + AL+ +MK N+ SW
Sbjct: 206 GKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSW 265
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
+++I GF Q G EA+E+ MQ VE +V P+ T+A VL ACA L +D GK +HG
Sbjct: 266 SAVIGGFAQNGYDEEAIEMLFRMQ---VEGLV-PNAQTLAGVLPACARLQRLDLGKQLHG 321
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL----------------- 340
Y+ R + V+ ALVD+Y +CG + A +F + K+ L
Sbjct: 322 YITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSK 381
Query: 341 ------------------AWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLL 381
+W ++IS + N EAF F+ M EG+ P+ T +L
Sbjct: 382 AKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVL 441
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
+ACA + + +G+ V ++ + ++++ S+ + A+ + ME D
Sbjct: 442 TACADTISLRQGKEIHAQAI-VKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEV-MEKD 499
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLID 470
V W AL+ G +E QYL++
Sbjct: 500 VPTWNALISGYTRSNQIER----IQYLLE 524
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP-- 437
LL A GL++ + F M L + + ++ + GLF EA L + +
Sbjct: 100 LLQMYARCGLLKDADFLFETMPMRNL-----HSWKAILSVYLDHGLFEEAFLLFQVLQFD 154
Query: 438 -MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDV 495
+E D FV+ + C G+VELG ++ +I + + N L DMY K G DD
Sbjct: 155 GVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDA 214
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHE 525
KK M ER ++ +G+V+E
Sbjct: 215 KKVLVKMPERDSVTWNSVITACAANGMVYE 244
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GSL YA + I +L ++N M+ A A H + + L++ ML G PD +
Sbjct: 619 GSLKYAQLAYDRISNPNLVSHNAMLTACAMHG------HGEEGISLFQTMLALGFIPDHV 672
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +L C G + + + V + S++ L G + A L +M
Sbjct: 673 TFLSVLSSCVHVGSVETGCEFFDLMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKM 732
Query: 199 SNR-DVVSWNAMIIGYLRSGDLDVA 222
D V W A++ G + G++++
Sbjct: 733 PVECDSVLWGALLGGCVTHGNIELG 757
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 305/594 (51%), Gaps = 87/594 (14%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
ID + R L +IH +++ S LQ N L+T+L+ S G + YA +F
Sbjct: 63 IDNSTHKRHLDQIHNRLVISG-LQHNGF--LMTKLV--NGSSNLGQICYARKLFDEFCYP 117
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
D++ +N +IR+ + +++ DT +++Y+ M TG+ PD TFP++LK CT+ LD
Sbjct: 118 DVFMWNAIIRSYS-RNNMYRDT-----VEMYRWMRWTGVHPDGFTFPYVLKACTELLDFG 171
Query: 155 VGASVYGQVVKFGVCDDVFVQN-------------------------------SVISLFM 183
+ ++GQ++K+G DVFVQN S+IS +
Sbjct: 172 LSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYA 231
Query: 184 ACGFVTSARMLFDEMSNRDV-VSWNAMI------------------------IG------ 212
G A +F +M N V W A++ +G
Sbjct: 232 QNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA 291
Query: 213 --------YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
Y + G + VA F +MK N+ WN++I+G+ + G A EA+ LF M S +
Sbjct: 292 LLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRN 351
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
+ KPD +T+ S + A A +G+++ +W+ Y+ +S D+ + T+L+DMY KCG V
Sbjct: 352 I----KPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSV 407
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
E A VF KD + W+AMI + L+G G EA + + M+ GV PN VTF+GLL+AC
Sbjct: 408 EFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTAC 467
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
HSGLV++G F M+ +V P HY+C++D+L RAG EA I +P+EP V V
Sbjct: 468 NHSGLVKEGWELFHCMKDFEIV-PRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSV 526
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
WGALL C+++ V LGE A L LDP N YV L ++YA + +D V R LM+E
Sbjct: 527 WGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMRE 586
Query: 505 RGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQY 558
+G+ K++ G S +E++G + F + + +E+ L L + +K GF Y
Sbjct: 587 KGLNKDL-GYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPY 639
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 257/455 (56%), Gaps = 20/455 (4%)
Query: 63 HSLITRLLFFCALSVSGSLSY----------ATNVFSHIKRSDLYTYNIMIRANACKSSE 112
H+ + +L F + VS SL Y A +VF+ + D+ ++N +I
Sbjct: 963 HNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLI------GGY 1016
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDV 172
+ + L L+K M + D +T ++ CT D + + + + DV
Sbjct: 1017 SQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDV 1076
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
++ N++I + G + SA +F +M +++ V+ NAMI Y + G+L A +F ++ +
Sbjct: 1077 YLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNK 1136
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
++ SW+S+I + Q ++LELF++MQ + V KPD + IASVLSACA+LGA+D G
Sbjct: 1137 DLISWSSMICAYSQASHFSDSLELFRQMQRAKV----KPDAVVIASVLSACAHLGALDLG 1192
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
KW+H Y+RR+ + D ++ +L+DM+ KCGCV+ A VF +M +KDTL+W ++I A N
Sbjct: 1193 KWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANN 1252
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
G+ EA D F M EG RPN VTF+G+L ACA+ LVE+G F M+ V+ +EP + H
Sbjct: 1253 GFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKH 1312
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
Y C++DILSRAG +A I MP+ PD VW LLG C+ HGNV + E + L +LD
Sbjct: 1313 YGCVVDILSRAGQLEKAVSFISEMPLAPDPVVWRILLGACRTHGNVAVAEMATKKLSELD 1372
Query: 473 PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
P N A + L ++YA A R+ D R + +
Sbjct: 1373 PGNSADSMLLSNIYASADRWSDAMNVRRWTADNAV 1407
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 224/378 (59%), Gaps = 5/378 (1%)
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
++ D F F+LK C GA ++ VV+ G +V ++I++++ + AR
Sbjct: 475 LADDTFVFTFVLKACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEAR 534
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+FDEM ++VVSWN MI G+ G+++ A LF +M RN+ SW +I G+ + E
Sbjct: 535 KVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAE 594
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
AL L + M + + P +IT+ +V+ A + LG I G+ ++GY + G+ D +G
Sbjct: 595 ALTLLRHMMAGGI----SPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGN 650
Query: 313 ALVDMYGKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
+L+D+Y K G V+ + VF EM +++ ++WT++IS FA++G EA + F EM G++
Sbjct: 651 SLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIK 710
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
PN +TF+ +++AC+H GLVE+G F M + Y ++P + H+ C+ID+L RAG EAE+
Sbjct: 711 PNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQ 770
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
+I +PME +V VW LLG C +G V +GE+ + + DL+ + + L ++ + GR
Sbjct: 771 IIEGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGR 830
Query: 492 FDDVKKTRNLMKERGIRK 509
F D ++ R L+ +R I K
Sbjct: 831 FSDAEQARKLLDQRKIVK 848
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 206/447 (46%), Gaps = 78/447 (17%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M +K++H ++ S S + RL AL S +S A VF I+ + +N
Sbjct: 854 MEAVKKLHAHLVVSGLHNCQYAMSKVIRLY---ALHQSDLVS-AHKVFKQIESPTTFLWN 909
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
++R A +S D + YK+ G+ PD LTFPF+LK C K G ++
Sbjct: 910 TLLRGLA-QSDAPKDA-----IVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMH 963
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
V+K G D+FV NS+I L+ ACG + AR +F+EM +DVVSWN++I GY
Sbjct: 964 NHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGY------- 1016
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
Q R +E L LF+ MQ+ E V+ DK+T+ V+
Sbjct: 1017 ------------------------SQHNRLKEVLTLFKLMQA----EEVQADKVTMVKVI 1048
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM------ 334
SAC +LG + Y+ + ++ DV +G L+D Y + G ++ A VF +M
Sbjct: 1049 SACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTV 1108
Query: 335 -------------------------PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
P KD ++W++MI ++ + ++ + FR+M+
Sbjct: 1109 TLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAK 1168
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
V+P+ V +LSACAH G ++ G+W +R + + + +ID+ ++ G EA
Sbjct: 1169 VKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTIMENS-LIDMFAKCGCVQEA 1227
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHG 456
++ M E D W +++ G +G
Sbjct: 1228 LQVFTDME-EKDTLSWNSIILGLANNG 1253
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 150/308 (48%), Gaps = 17/308 (5%)
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
L DL A +F++++ F WN+++ G Q ++A+ +++ Q E+ +KPD
Sbjct: 885 LHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQ----EKGMKPDN 940
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+T VL ACA A G+ +H ++ + G D+ + +L+ +Y CG + A VF E
Sbjct: 941 LTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNE 1000
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M KD ++W ++I ++ + KE F+ M+AE V+ + VT V ++SAC H G
Sbjct: 1001 MLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTH-----LG 1055
Query: 394 RWCFV--MMRHV--YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
W M+R++ +E VY +ID R G AE++ M + + A++
Sbjct: 1056 DWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQM-KDKNTVTLNAMI 1114
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
GN+ +K+ + + D ++ + ++ Y++A F D + M+ ++
Sbjct: 1115 TAYAKGGNLVSAKKIFDQIPNKDLIS---WSSMICAYSQASHFSDSLELFRQMQRAKVKP 1171
Query: 510 EVPGCSSV 517
+ +SV
Sbjct: 1172 DAVVIASV 1179
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/398 (19%), Positives = 178/398 (44%), Gaps = 51/398 (12%)
Query: 79 GSLSYATNVFSH-IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
GS+ + VF + R +L ++ +I A S + L+L+ +M GI P+
Sbjct: 660 GSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGL------SVEALELFAEMRRAGIKPNR 713
Query: 138 LTFPFLLKECTKRLDGLV--GASVYGQVV-KFGVCDDVFVQNSVISLFMACGFVTSARML 194
+TF ++ C+ GLV G + + +V ++ + ++ +I + G + A +
Sbjct: 714 ITFLSVINACSH--GGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQI 771
Query: 195 FDEMSNR-DVVSWNAMIIGYLRSGDL---DVALDLFRRMKKRNIFSWNSIITGFVQGGR- 249
+ + +V W ++ + G++ + A+ + +++ + + + + GR
Sbjct: 772 IEGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRF 831
Query: 250 --AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL-DC 306
A +A +L + + ++E V ++ K +H +L SGL +C
Sbjct: 832 SDAEQARKLLDQRKIVKLQEAV-------------------MEAVKKLHAHLVVSGLHNC 872
Query: 307 DVVIGTALVDMYG-KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
+ + ++ +Y + A+ VFK++ T W ++ A + K+A +++
Sbjct: 873 QYAM-SKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKA 931
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV----YLVEPHVYHYACMIDILS 421
+ +G++P+++TF +L ACA + ++G M HV +L++ ++ +I + +
Sbjct: 932 QEKGMKPDNLTFPFVLKACAKTCAPKEGE---QMHNHVIKLGFLLD--IFVSNSLIYLYA 986
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
G + A + M ++ DV W +L+GG H ++
Sbjct: 987 ACGALACARSVFNEMLVK-DVVSWNSLIGGYSQHNRLK 1023
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 289/532 (54%), Gaps = 31/532 (5%)
Query: 7 MVSYSLLNSPAKVSPPNKESTKLILRNA--IDECKNMRELKEIHTQIIKSPCLQTNDHHS 64
M + ++L SPA P R A + C + EIH +++ Q
Sbjct: 1 MSTAAVLPSPASTRHPAGGGALTADRAAALLAGCASASRAAEIHAAAVRASVDQDKAVAF 60
Query: 65 LITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKL 124
+ R A + SG L A + Y I A++ + L L
Sbjct: 61 RLQR-----AYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHR------AALAL 109
Query: 125 YKQMLCT--GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
+ML + G+ P T L C VG +++G VK + + +V +++ ++
Sbjct: 110 LSEMLLSRHGLLPTAHTLSASLPACGCLA---VGRALHGYAVKLALSGEPYVATALLGMY 166
Query: 183 MACGFVTSARMLFDEM-SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
G +AR LFD M + VVS AM+ Y + G LD A LF + ++++ WN+++
Sbjct: 167 ARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMM 226
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL-- 299
G+ Q GR EAL LF++M S VE PD++++ LSA A LG + G+W+H ++
Sbjct: 227 DGYTQHGRPSEALRLFRQMLRSGVE----PDEVSVVLALSAVAQLGTAESGRWLHSFVAN 282
Query: 300 --RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP---KKDTLAWTAMISVFALNGY 354
RR+ + + +GTALVDMY KCG +E A VF+++ +D +AW AMI+ +A++G
Sbjct: 283 GGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGR 342
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
+EA + F ++ A+G+ P +TF+G+L+AC+HSGLV++GR F M Y + P V HY
Sbjct: 343 SREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYG 402
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
CM+D+L RAG EA L++SM +PD +W +LLG C++H N+ LG++VA YL+
Sbjct: 403 CMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNGLA 462
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
N YV L +MYA AG++ +V + R++M+ G++KE PGCS+VEV V EF
Sbjct: 463 NSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKE-PGCSAVEVGRRVVEF 513
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 276/491 (56%), Gaps = 22/491 (4%)
Query: 82 SYATNVFSHIKRSDL---------YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG 132
S+ T + +++ DL TY I + NA S + +++M G
Sbjct: 219 SWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMG 278
Query: 133 ISPDCLTFPFLLKECTKRLDGL----VGASVYGQVVKFGVCDD----VFVQNSVISLFMA 184
I D T+ L+ C + + G V+G +++ V + V N++I+ +
Sbjct: 279 IQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTK 338
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
+ AR +FD+M RD++SWNA++ GY+ + ++ A +F M +RN+ +W +I+G
Sbjct: 339 YDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGL 398
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
Q G E L+LF +M+S +E P A ++AC+ LG++D+G+ +H + R G
Sbjct: 399 AQNGFGEEGLKLFNQMKSEGLE----PCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGH 454
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
D + G AL+ MY +CG VE A VF MP D+++W AMI+ A +G+G +A + F +
Sbjct: 455 DSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQ 514
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
M E + P+ +TF+ +L+AC H+GL+++GR F M Y + P HYA +ID+L RAG
Sbjct: 515 MMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAG 574
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
+F +A+ +I+SMP E +W ALL GC++HGN+ELG + A L++L P Y+ L +
Sbjct: 575 MFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSN 634
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
MYA G++D+V + R LM+ERG++KE PGCS VEV+ +VH F + + + + L
Sbjct: 635 MYAALGQWDEVARVRLLMRERGVKKE-PGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQ 693
Query: 545 GLSKIMKNGGF 555
L MK G+
Sbjct: 694 QLVNEMKKLGY 704
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 228/520 (43%), Gaps = 92/520 (17%)
Query: 65 LITRLLFFCALSVSGSLSYATNVFSHIKRS--DLYTYNIMIRANACKSSETNDTHSGKCL 122
++ R A S SG++ A +F+ + D +YN MI A S ND H+ L
Sbjct: 71 IVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITA----YSHGNDGHAA--L 124
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS-VYGQVVKFGVCDDVFVQNSVISL 181
L+ QM G PD TF +L + D ++ +V+K G V N+++S
Sbjct: 125 NLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSC 184
Query: 182 FMACG---------FVTSARMLFDEMSNRDVV--SWNAMIIGYLRSGDLDVALDLFRRMK 230
++ C + SAR +FDE + SW MI GY+R+ DL A +L +
Sbjct: 185 YVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLT 244
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY----L 286
+WN++I+G+V+ G EA + F+ M S ++E D+ T S++SAC +
Sbjct: 245 YPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQE----DEYTYTSLISACGSCNEKM 300
Query: 287 GAIDHGKWVHGYLRRSGLDC-----------------------------------DVVIG 311
G + G+ VHGY+ R+ ++ D++
Sbjct: 301 GMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISW 360
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
A++ Y +E A +F EMP+++ L WT MIS A NG+G+E F +M++EG+
Sbjct: 361 NAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLE 420
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWC---FVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
P F G ++AC+ G ++ G+ + + H + + +I + SR G+
Sbjct: 421 PCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGH----DSGLSAGNALITMYSRCGVVES 476
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGN----VELGEKVAQ---------YLIDLDPLN 475
AE + +MP D W A++ HG+ +EL E++ + +L L N
Sbjct: 477 AESVFLTMPY-VDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACN 535
Query: 476 HA--------FYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
HA ++ +C Y D + +L+ G+
Sbjct: 536 HAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGM 575
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 175/409 (42%), Gaps = 66/409 (16%)
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
++ +V+ ++ G + F+ N +I+++ +T AR LFD++ D+V+ ++ Y
Sbjct: 22 IIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAY 81
Query: 214 LRSGDLDVALDLFRR--MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
SG++ +A LF + R+ S+N++IT + G AL LF +M+ P
Sbjct: 82 SSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYG----FLP 137
Query: 272 DKITIASVLSACAYLGAID-HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC------- 323
D T +SVLSA + + + H + +H + + G + AL+ Y C
Sbjct: 138 DPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSS 197
Query: 324 --VERAYGVFKEMPKKDT---------------------------------LAWTAMISV 348
+ A VF E PK +AW AMIS
Sbjct: 198 QLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISG 257
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS----GLVEKGRWCF-VMMRHV 403
+ G +EAFDTFR M + G++ + T+ L+SAC G+ GR ++R V
Sbjct: 258 YVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTV 317
Query: 404 YLVEPHVYHYA-----CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
VEP +H+ +I ++ EA R+ MP+ D+ W A+L G + N
Sbjct: 318 --VEPS-HHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSG---YVNA 370
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+ E+ ++ N + + A+ G ++ K N MK G+
Sbjct: 371 QRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGL 419
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 278/500 (55%), Gaps = 18/500 (3%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + +D+C N+ ++K+IH +++ Q+ + + R L + + YA V
Sbjct: 52 LISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD---PYARRVIEP 108
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
++ + + + +IR A + + + +Y M I+P TF LLK C
Sbjct: 109 VQFRNPFLWTAVIRGYAIEGK------FDEAIAMYGCMRKEEITPVSFTFSALLKACGTM 162
Query: 151 LDGLVGASVYGQVVKF-GVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
D +G + Q + G C V+V N++I +++ C + AR +FDEM RDV+SW +
Sbjct: 163 KDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I Y R G+++ A +LF + +++ +W +++TGF Q + +EALE F M+ S +
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI---- 277
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD--VVIGTALVDMYGKCGCVERA 327
+ D++T+A +SACA LGA + ++SG VVIG+AL+DMY KCG VE A
Sbjct: 278 RADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEA 337
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAH 386
VF M K+ +++MI A +G +EA F M + ++PN VTFVG L AC+H
Sbjct: 338 VNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSH 397
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
SGLV++GR F M + V+P HY CM+D+L R G EA LI++M +EP VWG
Sbjct: 398 SGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWG 457
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALLG C++H N E+ E A++L +L+P Y+ L ++YA AG + V + R L+KE+G
Sbjct: 458 ALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKG 517
Query: 507 IRKEVPGCSSVEVDGVVHEF 526
++K V+ +G +H+F
Sbjct: 518 LKKTPAVSWVVDKNGQMHKF 537
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 279/510 (54%), Gaps = 27/510 (5%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHH--SLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
K++R +++H + +SP +D H + + + C V A VF + ++
Sbjct: 165 KDLRTGEQVHGLVARSP--HADDVHIGTALVDMYAKCERPVD-----ARRVFDAMPERNV 217
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
++N +I + + G+ L L+ +M+ TG PD +T ++ C G
Sbjct: 218 VSWNSLI------TCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREG 271
Query: 157 ASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
V+ +VK + DD+ + N+++ ++ CG AR +FD M +R VVS +++ GY +
Sbjct: 272 RQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAK 331
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
S +++ A +F +M ++N+ +WN +I + Q G EA+ LF +++ S+ P T
Sbjct: 332 SANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI----WPTHYT 387
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGL------DCDVVIGTALVDMYGKCGCVERAYG 329
+VL+AC + + G+ H ++ + G + DV +G +LVDMY K G ++
Sbjct: 388 YGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAK 447
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF+ M +D ++W AMI +A NG K+A F M P+ VT +G+LSAC HSGL
Sbjct: 448 VFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGL 507
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V++GR F M + + P HY CM+D+L RAG EAE LI+ MP EPD +W +LL
Sbjct: 508 VDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLL 567
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G C++H NVELGE+ A L +LDP N YV L +MYA+ G++ DV + R MK+RG+ K
Sbjct: 568 GACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSK 627
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEEL 539
+ PGCS +E+ ++ F + + + E+
Sbjct: 628 Q-PGCSWIEIGSKMNVFLARDNRHPCRNEI 656
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 197/456 (43%), Gaps = 86/456 (18%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
+RE + + I P T +++L++ A + G A +F I D +YN
Sbjct: 68 LREARRVFDGI---PLRNTFSYNALLS------AYARLGRPDEARALFEAIPDPDQCSYN 118
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
++ A A H+G L+ M + +F L C D G V+
Sbjct: 119 AVVAALA----RHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVH 174
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G V + DDV + +++ ++ C AR +FD M R+VVSWN++I Y ++G +
Sbjct: 175 GLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVG 234
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
AL LF M + TGF PD++T++SV+
Sbjct: 235 EALVLFVEM----------MATGFF-------------------------PDEVTLSSVM 259
Query: 281 SACAYLGAIDHGKWVHGYL-RRSGLDCDVVIGTALVDMYGKCG------C---------- 323
SACA L A G+ VH ++ +R L D+V+ ALVDMY KCG C
Sbjct: 260 SACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSV 319
Query: 324 ---------------VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
VE A VF +M +K+ +AW +I+ +A NG +EA F +++ +
Sbjct: 320 VSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRD 379
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-----RHVYLVEPHVYHYACMIDILSRA 423
+ P H T+ +L+AC + +++ G+ V + R + E V+ ++D+ +
Sbjct: 380 SIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKT 439
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
G + ++ M +V W A++ G +G +
Sbjct: 440 GSIDDGAKVFERMAARDNV-SWNAMIVGYAQNGRAK 474
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 168/331 (50%), Gaps = 10/331 (3%)
Query: 144 LKECTKRLDGLVGA-SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
L + + L GA + +G V+K V + F+ N+++S + G + AR +FD + R+
Sbjct: 23 LADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRN 82
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR--AREALELFQEM 260
S+NA++ Y R G D A LF + + S+N+++ + GR A +AL M
Sbjct: 83 TFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAM 142
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
+ ++ V + + AS LSACA + G+ VHG + RS DV IGTALVDMY K
Sbjct: 143 HA---DDFVL-NAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAK 198
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
C A VF MP+++ ++W ++I+ + NG EA F EM A G P+ VT +
Sbjct: 199 CERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSV 258
Query: 381 LSACAHSGLVEKGRWCFV-MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+SACA +GR M++ L + V + A ++D+ ++ G EA + SMP
Sbjct: 259 MSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNA-LVDMYAKCGRTWEARCIFDSMPSR 317
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
V ++L G NVE + V +++
Sbjct: 318 -SVVSETSILAGYAKSANVEDAQVVFSQMVE 347
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 255/448 (56%), Gaps = 42/448 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS++ A +F ++ D+ ++ +MI A A + + +L QM G P+ +
Sbjct: 178 GSINEARRIFDNLMNHDIISWTVMIGAYA------QSGNGKEAYRLMLQMEQEGFKPNAI 231
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T+ +L C GA + + V R D
Sbjct: 232 TYVSILNACASE-----GALKWVKRVH--------------------------RHALDAG 260
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
DV A++ Y +SG +D A +F RMK R++ SWN +I F + GR EA +LF
Sbjct: 261 LELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFL 320
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+MQ+ E KPD I S+L+ACA GA++ K +H + SGL+ DV +GTALV MY
Sbjct: 321 QMQT----EGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMY 376
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
K G ++ A VF M ++ ++W AMIS A +G G++A + FR M A GV+P+ VTFV
Sbjct: 377 SKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFV 436
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+LSAC+H+GLV++GR ++ M VY +EP V H CM+D+L RAG EA+ I +M +
Sbjct: 437 AVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAV 496
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+PD WGALLG C+ +GNVELGE VA+ + LDP N A YV L ++YA+AG++D V
Sbjct: 497 DPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWV 556
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R +M+ERGIRKE PG S +EVD +H+F
Sbjct: 557 RTMMRERGIRKE-PGRSWIEVDNKIHDF 583
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 192/416 (46%), Gaps = 75/416 (18%)
Query: 129 LCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFV 188
L G+ D + +LK C K+ D + V+ ++K + + V N+++ +++ CG +
Sbjct: 20 LQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRL 79
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
AR +FD + K++ SWN++I G+V+
Sbjct: 80 QEARCVFDALV-------------------------------KKSGASWNAMIAGYVEHK 108
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
A +A+ LF+EM E V+P+ T +L ACA L A+ GK VH +R GL+ DV
Sbjct: 109 HAEDAMRLFREM----CHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDV 164
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
+GTAL+ MYGKCG + A +F + D ++WT MI +A +G GKEA+ +ME E
Sbjct: 165 RVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQE 224
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY-------------LVEPH------ 409
G +PN +T+V +L+ACA G + +W + RH LV+ +
Sbjct: 225 GFKPNAITYVSILNACASEGAL---KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSI 281
Query: 410 --------------VYHYACMIDILSRAGLFSEAERLIRSMPME---PDVFVWGALLGGC 452
V + MI + G EA L M E PD ++ ++L C
Sbjct: 282 DDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNAC 341
Query: 453 QMHGNVELGEKVAQYLIDLD-PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
G +E +K+ ++ +D ++ L MY+K+G DD + + MK R +
Sbjct: 342 ASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNV 397
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 165/427 (38%), Positives = 251/427 (58%), Gaps = 9/427 (2%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDG--LVGASVYGQVVKFGVCD-DVFVQNSVISL 181
+ M G+ P+ +TF LL L G +G ++G K G+ V V +++ +
Sbjct: 2 FSGMRLAGVEPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGM 61
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ G AR++FD M ++ V+WN MI GY+R+G +D A+ LF M +R++ SW ++I
Sbjct: 62 YSKRGRFRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMI 121
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
GFV+ G EAL F+EMQ S V KPD + I + L+AC LGA+ G W+H Y+
Sbjct: 122 NGFVKKGFHEEALAWFREMQISGV----KPDYVAIIAALAACTNLGALSFGLWIHRYVVS 177
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
+V + +L+D+Y +CGCVE A VF +M K+ ++W ++I FA NG+ E+
Sbjct: 178 QDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVY 237
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR+M+ EG +PN VTF G L+AC H GLVE+G F M+ Y + P + HY C++D+ S
Sbjct: 238 FRKMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYS 297
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG-NVELGEKVAQYLIDLDPLNHAFYV 480
RAG +A ++++SMPM+P+ V G+LL C+ G N L E+V ++L DL+ +H+ YV
Sbjct: 298 RAGRLEDALKVVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYV 357
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELV 540
L +MYA G+++ K R MK G++KE PG SS+E+D H F + V +
Sbjct: 358 ILSNMYAADGKWEGASKMRRKMKGLGLKKE-PGFSSIEIDDCTHVFMAGDNTHVETTNIR 416
Query: 541 LILNGLS 547
+L LS
Sbjct: 417 EVLELLS 423
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G + A +F + DL ++ MI K + L +++M +G+ PD
Sbjct: 96 NGQVDDAVKLFDEMPERDLISWTAMINGFVKKGFHE------EALAWFREMQISGVKPDY 149
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+ L CT G ++ VV ++V V NS+I L+ CG V AR +FD+
Sbjct: 150 VAIIAALAACTNLGALSFGLWIHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDK 209
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M R VVSWN++I+G+ G A E+L F
Sbjct: 210 MEKRTVVSWNSVIVGF-------------------------------AANGHAHESLVYF 238
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVD 316
++MQ EE KP+ +T L+AC ++G ++ G ++ R + + LVD
Sbjct: 239 RKMQ----EEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVD 294
Query: 317 MYGKCGCVERAYGVFKEMPKK 337
+Y + G +E A V + MP K
Sbjct: 295 LYSRAGRLEDALKVVQSMPMK 315
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 279/482 (57%), Gaps = 15/482 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDC 137
G + A F + D+ ++N MI C ++ + L+ + +L T + PD
Sbjct: 187 GRVDLALAQFELLSERDIVSWNSMIAG--CNQHGFDN----EALQFFSSILKDTSLKPDR 240
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+ L C G ++G +V+ V N++IS++ G V AR + ++
Sbjct: 241 FSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300
Query: 198 --MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
+S+ DV+++ A++ GY++ GD+ A +F +K ++ +W ++I G+VQ G +A+E
Sbjct: 301 SGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIE 360
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
+F+ M V E +P+ T+A++LSA + + +++HGK +H RSG +G AL
Sbjct: 361 VFKTM----VSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALT 416
Query: 316 DMYGKCGCVERAYGVFKEMPK-KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
MY K G + A VF + + +DT++WT+MI A +G G+EA + F +M G++P+H
Sbjct: 417 TMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDH 476
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+T+VG+LSAC H GLVE+GR F +M++V+ ++P + HYACM+D+ RAGL EA + +
Sbjct: 477 ITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVE 536
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
+MPMEPDV WG+LL C+++ NV+L + A+ L+ ++P N Y L ++Y+ G++DD
Sbjct: 537 NMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDD 596
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
K R LMK RG++KE G S V++ H F ++ K+E+ +++ + K +K G
Sbjct: 597 AAKIRKLMKARGVKKE-QGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMG 655
Query: 555 FG 556
F
Sbjct: 656 FA 657
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 211/495 (42%), Gaps = 92/495 (18%)
Query: 79 GSLSYATNVFSHIKRSDLYTYN-IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G L A VF I D ++ I++ N E +K++ M+ + P
Sbjct: 55 GKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFE-------DAIKIFVDMVKDKVLPTQ 107
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T +L C +G V+ VVK G+ V V NS+++++ G + A+++FD
Sbjct: 108 FTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDR 167
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M R+ SWNAMI ++ G +D+AL F + +R+I SWNS+I G Q G EAL+ F
Sbjct: 168 MKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFF 227
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+ + +KPD+ ++AS LSACA L + GK +HGY+ R+ D +G AL+ M
Sbjct: 228 SSILK---DTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISM 284
Query: 318 YGKCGCVE---------------------------------RAYGVFKEMPKKDTLAWTA 344
Y K G VE A +F + D +AWTA
Sbjct: 285 YAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTA 344
Query: 345 MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC-------------------- 384
MI + NG +A + F+ M +EG RPN T +LSA
Sbjct: 345 MIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSG 404
Query: 385 ---------------AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
A +G + R F ++R + MI L++ GL EA
Sbjct: 405 EALSPSVGNALTTMYAKAGSINGARKVFNLLRQ----NRDTVSWTSMIMALAQHGLGEEA 460
Query: 430 ERLIRSM---PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID---LDP-LNHAFYVNL 482
L M ++PD + +L C G VE G + + +DP L+H Y +
Sbjct: 461 IELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSH--YACM 518
Query: 483 CDMYAKAGRFDDVKK 497
D++ +AG + K
Sbjct: 519 VDLFGRAGLLQEAYK 533
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 169/347 (48%), Gaps = 46/347 (13%)
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
+VK G+ V++ N++++L+ GF A LF+EM + SWN ++ GY + G L+ A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
+F + R+ SW +II G+ Q GR +A+++F +M V++ V P + T+ +VL++
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDM----VKDKVLPTQFTLTNVLAS 116
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
CA G+ GK VH ++ + GL V + +L++MY K G ++ A VF M ++T +W
Sbjct: 117 CAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSW 176
Query: 343 TAMISV-------------FAL------------------NGYGKEAFDTFRE-MEAEGV 370
AMIS+ F L +G+ EA F ++ +
Sbjct: 177 NAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSL 236
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA----CMIDILSRAGLF 426
+P+ + LSACA+ +EK F H Y+V +I + +++G
Sbjct: 237 KPDRFSLASALSACAN---LEK--LSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGV 291
Query: 427 SEAERLI-RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
A R+I +S + DV + ALL G G++ ++ L D D
Sbjct: 292 EIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPD 338
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/515 (33%), Positives = 286/515 (55%), Gaps = 44/515 (8%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M E K+ H +I+K + + L+ CALS GS+ YA ++F + + +N
Sbjct: 1 MEEFKQSHARILKXGLFXDS---FCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
M+R + D ++ + L YK+M G+ PD T+P LLK C + G V+
Sbjct: 58 TMMRGH------VKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVH 111
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
++K G+ +DVFVQNS+IS++ C G++
Sbjct: 112 AHILKLGLENDVFVQNSLISMYGKC-------------------------------GEIG 140
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
V +F +M +R++ SW+++IT G + L L +M S E + ++ + SVL
Sbjct: 141 VCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDM---SNEGYWRAEESILVSVL 197
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SAC +LGA+D G+ VHG+L R+ +V++ T+L++MY KCG + + +F++M KK+ L
Sbjct: 198 SACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKL 257
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+++ MIS A++GYG+E F EM +G+ P+ + +VG+L+AC+H+GLV++G CF M
Sbjct: 258 SYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRM 317
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+ + +EP + HY CM+D++ RAG EA LI+SMPMEP+ +W +LL ++H N++
Sbjct: 318 KLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQA 377
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
GE A+ L LD + YV L +MYA+A R++DV +TR M +G+ + PG S VEV
Sbjct: 378 GEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQR-PGFSLVEVK 436
Query: 521 GVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+H F + + E + +L + +K G+
Sbjct: 437 RKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGY 471
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 260/446 (58%), Gaps = 9/446 (2%)
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG--LVGASVYGQVVKFGVC- 169
T + + K + M G+ P+ +TF LL C G +G ++G K G
Sbjct: 36 TRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGSEALGDLLHGYACKLGHDR 95
Query: 170 DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
V V +++ ++ V AR++FD M +++ V+WN MI GY+R+G +D A+ +F +M
Sbjct: 96 THVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKMFDKM 155
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
+R++ SW ++I GFV+ G EAL F+EMQ S V KPD + I + L+AC LGA+
Sbjct: 156 PERDLISWTAMINGFVKKGFHEEALAWFREMQISGV----KPDYVAIIAALNACTNLGAL 211
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
G WVH Y+ +V + +L+D+Y +CGCVE A VF +M K+ ++W ++I F
Sbjct: 212 SFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGF 271
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A NG E+ FR+M+ EG +P+ VTF G L+AC+H GLVE+G F M+ + + P
Sbjct: 272 AANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPR 331
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN-VELGEKVAQYL 468
+ HY C++D+ SRAG EA ++++SMPM+P+ V G+LL C+ HGN L E++ ++L
Sbjct: 332 IEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHL 391
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM 528
D++ H+ YV L +MYA G+++ + R MK G++K+ PG SS+E+D H F
Sbjct: 392 SDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQ-PGFSSIEIDDCTHVFMA 450
Query: 529 KGSPKVVKEELVLILNGLSKIMKNGG 554
S V ++ +L +S ++ G
Sbjct: 451 GDSAHVETADIREVLELVSSDLQLQG 476
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 127/281 (45%), Gaps = 48/281 (17%)
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
R D + + I SW S IT + GR EA + F +M+ + VE P+ I
Sbjct: 6 RKHHADPKIQKLNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVE----PNHI 61
Query: 275 TIASVLSACAYL--GAIDHGKWVHGYLRRSGLD-CDVVIGTALVDMYGK----------- 320
T ++LS C G+ G +HGY + G D V++GTA++ MY K
Sbjct: 62 TFIALLSGCGDFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVF 121
Query: 321 --------------------CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
G V+ A +F +MP++D ++WTAMI+ F G+ +EA
Sbjct: 122 DYMEDKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALA 181
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV----EPHVYHYACM 416
FREM+ GV+P++V + L+AC + G + G W H Y++ + +V +
Sbjct: 182 WFREMQISGVKPDYVAIIAALNACTNLGALSFGLWV-----HRYVMSQDFKNNVKVSNSL 236
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
ID+ R G A + M + V W +++ G +GN
Sbjct: 237 IDLYCRCGCVEFAREVFDKME-KRTVVSWNSVIVGFAANGN 276
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++WT+ I++ NG EA F +M GV PNH+TF+ LLS C G G
Sbjct: 26 VSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGC---GDFSSGSEALGD 82
Query: 400 MRHVYLVE-----PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
+ H Y + HV ++ + S+ +A RL+ + + W ++ G
Sbjct: 83 LLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKA-RLVFDYMEDKNSVTWNTMIDGYMR 141
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVN 481
+G V+ K+ + + D ++ +N
Sbjct: 142 NGQVDNAVKMFDKMPERDLISWTAMIN 168
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 179/520 (34%), Positives = 288/520 (55%), Gaps = 54/520 (10%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF + ++N M+ A D H ++++ M G+ P+ +
Sbjct: 184 GRMDDARKVFERMAVRSCVSWNTMVSGYALNY----DCHGAS--EMFRMMGSAGLEPNLV 237
Query: 139 TFPFLLK---ECTKRLDGL----------VGAS----------------------VYGQV 163
T+ LL C + ++ + +GA+ ++G V
Sbjct: 238 TWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYV 297
Query: 164 VKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
VK G + +FV+NS+I L+ G V +AR+LF E+ +++VSWNA+I Y G D A
Sbjct: 298 VKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAF 357
Query: 224 DLFRRMKKR--------NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
+F +++K N+ SW+++I GF G+ EALELF+ MQ + V K + +T
Sbjct: 358 AIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKV----KANSVT 413
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
IASVLS CA L A+ G+ +HG++ RS +D ++++G L++MY K G + VF+++
Sbjct: 414 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE 473
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
KD ++W M++ + ++G G+ A TF +M +G P+ VTFV +LSAC+H+GLV +GR
Sbjct: 474 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 533
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M + VEP + HYACM+D+L RAGL EA ++++SMP+EP+ VWGALL C+MH
Sbjct: 534 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMH 593
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
N E+ E+ A + +L+ Y+ L ++YA +GR++D K R K +G++K PG S
Sbjct: 594 KNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKK-TPGQS 652
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++V V+ FS + EE+ IL L M+ G+
Sbjct: 653 WIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGY 692
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 223/490 (45%), Gaps = 71/490 (14%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PN + + + +C ++IH+QII T H S + G +
Sbjct: 29 PNNDVLDF-FNDLLQQCSKSHLSQQIHSQIIV-----TGSHRSAFLAARVVSVYAGFGLV 82
Query: 82 SYATNVF--SHIK-RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
S A VF S I+ S+L +N ++RAN + + L++Y +M G+S D
Sbjct: 83 SDAQRVFEVSPIECFSNLLLWNSILRANVAHG------YCEEALEIYCRMRKLGVSADGF 136
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TFP +++ C + SV+G VV+ G ++ V N ++ ++ G + AR +F+ M
Sbjct: 137 TFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERM 196
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK----KRNIFSWNSIITGFVQGGRAREAL 254
+ R VSWN M+ GY + D A ++FR M + N+ +W S+++ + G+ E +
Sbjct: 197 AVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETM 256
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
ELF M+ + + +A VLS L A D GK +HGY+ + G + + + +L
Sbjct: 257 ELFGRMRMRGIGATAE----ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSL 312
Query: 315 VDMYGKCGCV-------------------------------ERAYGVFKEMPKKD----- 338
+ +YGK G V + A+ +F ++ K D
Sbjct: 313 ICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMV 372
Query: 339 ---TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
++W+A+I FA G G+EA + FR M+ V+ N VT +LS CA + GR
Sbjct: 373 RPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGR- 431
Query: 396 CFVMMRHVY--LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
+ HV L++ ++ +I++ +++G F E + + D+ W ++ G
Sbjct: 432 --EIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE-NKDLISWNTMVAGYG 488
Query: 454 MHGNVELGEK 463
+HG LGE
Sbjct: 489 IHG---LGEN 495
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 311/605 (51%), Gaps = 89/605 (14%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PN + IL+ + E +++H I K L N +++++ L+ F V +
Sbjct: 249 PNSYTFSSILK-CFAAVARVEEGRQVHGLICK---LGFNSYNTVVNSLISF--YFVGRKV 302
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A +F + D+ ++N MI S + + ++++ +ML G+ D T
Sbjct: 303 RCAQKLFDELTDRDVISWNSMI------SGYVKNGLDDRGIEIFIKMLVFGVDIDLATMV 356
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCD-DVFVQNSVISLFMACGFVTSA-----RM-- 193
+ C L+G ++ +K D +V N+++ ++ CG + SA RM
Sbjct: 357 NVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDE 416
Query: 194 ------------------------LFDEMSNRDVVS------------------------ 205
LFDEM +R VV
Sbjct: 417 KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIV 476
Query: 206 ---------------WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
NA+ Y + G + A D+F MKK+++ SWN++I G+ +
Sbjct: 477 HDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLP 536
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
EAL LF EMQ S KPD T+A +L ACA L A+D G+ +HGY R+G D +
Sbjct: 537 NEALTLFAEMQRES-----KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYV 591
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
A+VDMY KCG + A +F +P KD ++WT MI+ + ++GYG EA +TF +M G+
Sbjct: 592 TNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGI 651
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
P+ V+F+ +L AC+HSGL+++G F +M+ +EP++ HYACM+D+L+R G +A
Sbjct: 652 EPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAH 711
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
+ I++MP++PD +WGALL GC++H +V+L EKVA+ + +L+P N +YV L ++YA+A
Sbjct: 712 KFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAE 771
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
++++V+K R + +RG++K PGCS +E+ G ++ F K +++ L+L L M
Sbjct: 772 KWEEVQKLRKKIGQRGLKKN-PGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKM 830
Query: 551 KNGGF 555
K G+
Sbjct: 831 KEEGY 835
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 179/376 (47%), Gaps = 48/376 (12%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L VF + S ++ +N+MI S + + G+ + L+KQML GI P+
Sbjct: 199 GDLKEGRMVFDKLSESKIFLWNLMI------SEYSGSGNYGESINLFKQMLELGIKPNSY 252
Query: 139 TFPFLLK--ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
TF +LK R++ G V+G + K G V NS+IS + V A+ LFD
Sbjct: 253 TFSSILKCFAAVARVEE--GRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFD 310
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
E+++ R++ SWNS+I+G+V+ G +E+
Sbjct: 311 ELTD-------------------------------RDVISWNSMISGYVKNGLDDRGIEI 339
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY-LRRSGLDCDVVIGTALV 315
F +M V+ D T+ +V ACA +G + GK +H Y ++ + LD +V L+
Sbjct: 340 FIKMLVFGVD----IDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLL 395
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DMY KCG + A VF+ M +K ++WT+MI+ + G A F EM++ GV P+
Sbjct: 396 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVY 455
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
+L+ACA +G ++ G+ +R L E + + + D+ ++ G +A +
Sbjct: 456 AVTSILNACAINGNLKSGKIVHDYIRENNL-ETNSFVSNALTDMYAKCGSMKDAHDVFSH 514
Query: 436 MPMEPDVFVWGALLGG 451
M + DV W ++GG
Sbjct: 515 MK-KKDVISWNTMIGG 529
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 150/334 (44%), Gaps = 39/334 (11%)
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
++ Y++ GDL +F ++ + IF WN +I+ + G E++ LF++M +E
Sbjct: 191 LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQM----LELG 246
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
+KP+ T +S+L A + ++ G+ VHG + + G + + +L+ Y V A
Sbjct: 247 IKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQ 306
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F E+ +D ++W +MIS + NG + F +M GV + T V + ACA+ G
Sbjct: 307 KLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIG 366
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME--------- 439
+ G+ ++ V ++D+ S+ G + A R+ M +
Sbjct: 367 TLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMI 426
Query: 440 -------------------------PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
PDV+ ++L C ++GN++ G+ V Y+ + +
Sbjct: 427 TGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLE 486
Query: 475 NHAFYVN-LCDMYAKAGRFDDVKKTRNLMKERGI 507
++F N L DMYAK G D + MK++ +
Sbjct: 487 TNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDV 520
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 116/262 (44%), Gaps = 32/262 (12%)
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+DV LD R+ I F + G + A+EL Q+S+ D S
Sbjct: 114 MDVELDSSRK------------IVEFCEVGDLKNAMELLCSSQNSNF------DLGAYCS 155
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+L CA +I G+ V + SG+ D ++G LV MY KCG ++ VF ++ +
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
W MIS ++ +G E+ + F++M G++PN TF +L A VE+GR
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQV-- 273
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSE----AERLIRSMPMEPDVFVWGALLGGCQM 454
H + + Y +++ L A++L + + DV W +++ G
Sbjct: 274 ---HGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELT-DRDVISWNSMISGYVK 329
Query: 455 HG----NVELGEKVAQYLIDLD 472
+G +E+ K+ + +D+D
Sbjct: 330 NGLDDRGIEIFIKMLVFGVDID 351
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 171/478 (35%), Positives = 266/478 (55%), Gaps = 45/478 (9%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M++LK+IH ++I+ L + ++ +++ FCA + G ++YA +VF I D + +N
Sbjct: 1 MKDLKQIHARVIQ---LGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFN 57
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
MIR + ND K YK+M G+ D TF FLLK C + L+G ++
Sbjct: 58 TMIRG----FGKANDPR--KAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMH 111
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+K G+ VFV+N+++ ++ + ++R LF+E+ N ++V+
Sbjct: 112 CSTLKRGLNSHVFVRNTLVHMYGTFKDIEASRQLFEEIPNPELVA--------------- 156
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
WN II V G+ EALE+F M +E PD+ T +L
Sbjct: 157 ----------------WNIIIDCHVSCGKFNEALEMFSRMLKFGIE----PDEATFVVIL 196
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SAC+ LGA+D G+WVH + G C + +L+DMY KCG ++ A+ +F M KK+T+
Sbjct: 197 SACSALGALDFGRWVHSCISNIGHGCITEVNNSLLDMYAKCGALQEAFEIFNGMNKKNTV 256
Query: 341 AWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
W MI A +GY EA F M E + P+ +TF+ +LSAC+H G+V+KG F +
Sbjct: 257 TWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITFLVVLSACSHGGMVDKGWRFFDI 316
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M+ Y ++P + HY CM+DIL RAG EA RLI +MPM+ + VW LL C++HGNVE
Sbjct: 317 MKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLISNMPMQCNAIVWRTLLAACRLHGNVE 376
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
LG++V + L++L+P + + YV L + YA AGR+++ + R M +RG++K PG S V
Sbjct: 377 LGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNEAMRVRKTMHKRGVQKPEPGNSVV 434
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 188/562 (33%), Positives = 296/562 (52%), Gaps = 80/562 (14%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
S P + + + + CK L+++H II Q DH + L A ++
Sbjct: 21 SSPFRLHSAASITTLLKACKKREHLEQVHACIIHRGLEQ--DH--FLVFLFISRAHTLLS 76
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
+LSYA++VF + +N +I+++ C+ + + T L + +M G PD T
Sbjct: 77 TLSYASSVFHRVLAPSTVLWNTLIKSH-CQKNLFSHT-----LSAFARMKAHGALPDSFT 130
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF------------ 187
+P ++K C+ G S++G + GV D++V S+I ++ CG
Sbjct: 131 YPSVIKACSGTCKAREGKSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMS 190
Query: 188 -------------------VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRR 228
V AR LFDEM +R+V SWN+M+ G+++ GDL A +F
Sbjct: 191 DRNVVSWTAMLVGYVAVGDVVEARKLFDEMPHRNVASWNSMLQGFVKMGDLSGARGVFDA 250
Query: 229 MKKRNIFS-------------------------------WNSIITGFVQGGRAREALELF 257
M ++N+ S W+++I+G+VQ G +AL +F
Sbjct: 251 MPEKNVVSFTTMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQALRVF 310
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC--DVVIGTALV 315
EM+ +V KPD+ + S++SA A LG ++ +WV Y+ + +D D VI AL+
Sbjct: 311 LEMELMNV----KPDEFILVSLMSASAQLGHLELAQWVDSYVSKICIDLQQDHVIA-ALL 365
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DM KCG +ERA +F E P++D + + +MI +++G G+EA + F M EG+ P+ V
Sbjct: 366 DMNAKCGNMERALKLFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEV 425
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
F +L+AC+ +GLV++GR F M+ Y + P HYACM+D+LSR+G +A LI+
Sbjct: 426 AFTVILTACSRAGLVDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSGHIRDAYELIKL 485
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
+P EP WGALLG C+++G+ ELGE VA L +L+PLN A YV L D+YA A R+ DV
Sbjct: 486 IPWEPHAGAWGALLGACKLYGDSELGEIVANRLFELEPLNAANYVLLSDIYAAAERWIDV 545
Query: 496 KKTRNLMKERGIRKEVPGCSSV 517
R+ M+ER +RK +PG S +
Sbjct: 546 SLVRSKMRERRVRK-IPGSSKI 566
>gi|125603908|gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
Length = 567
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 228/343 (66%), Gaps = 7/343 (2%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+V NS+++ F G + AR +FDEM R++VSWNAM+ GY + D+D A +LF M
Sbjct: 225 NVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMP 284
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
++++ SW +I+G+ Q GR ++ LELF+ MQ+ E V+P+++T+ SVLSACA L A++
Sbjct: 285 EKDVVSWTCMISGYAQAGRYQDTLELFRAMQT---ESNVQPNEVTMVSVLSACANLTALE 341
Query: 291 HGKWVHGYLRRSG--LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
G+WVH ++ + L+ + +G AL+DMY KCG + A +F + +K+ AW A+I+
Sbjct: 342 EGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITR 401
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
A+NG +++ D F +M+ G +PN +TFVG+L+AC+H GLV++GR CF M V+P
Sbjct: 402 LAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQP 461
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
V HY CM+D+L RAGL EAE LIRSMPM PDV V+GALLG C+MH ++ E+V +
Sbjct: 462 EVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKRFDVAERVQSEI 521
Query: 469 --IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
++L+ +V + D+YA AG++ DV + R +++ GIRK
Sbjct: 522 HSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGIRK 564
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 186/404 (46%), Gaps = 89/404 (22%)
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
S + I+IRA+A +S G + +L G+ PD T P LL K L
Sbjct: 57 SATFLQKILIRASASSASP------GLSFAAFSSLLRCGLVPDRFTLPPLLGSAGK-LPA 109
Query: 154 L--VGASVYGQVVKFGVCDDVFVQNSVISLFMA--------------------------- 184
GA V+ Q V+ G DVFV N++++++ A
Sbjct: 110 FPRTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVI 169
Query: 185 -----CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK--RNIFSW 237
CG + SA+ +FDEM R+ VSW+ M+ GY +G+LDVA ++F RM RN+ +W
Sbjct: 170 GGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGRNVVTW 229
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
NS++TGF + G A ++F EM + +++S A L G
Sbjct: 230 NSMVTGFARHGLLPLARKMFDEM--------------PVRNLVSWNAML---------RG 266
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
Y S +D A +F MP+KD ++WT MIS +A G ++
Sbjct: 267 YSVNSDMDG--------------------ARELFDVMPEKDVVSWTCMISGYAQAGRYQD 306
Query: 358 AFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY-AC 415
+ FR M+ E V+PN VT V +LSACA+ +E+GRW + +V + Y+ A
Sbjct: 307 TLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAA 366
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ID+ ++ G A ++ S+ + +V W AL+ M+GN
Sbjct: 367 LIDMYAKCGRTDIAVKIFNSLDRK-NVSAWNALITRLAMNGNAR 409
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 120/304 (39%), Gaps = 70/304 (23%)
Query: 271 PDKITIASVLSACAYLGAIDH-GKWVHGYLRRSGLDCDVVIGTALVDMYG---------- 319
PD+ T+ +L + L A G VH R G DV + AL+ MYG
Sbjct: 92 PDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMRE 151
Query: 320 ----------------------KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
KCG +E A VF EMP+++ ++W+ M+ +A G
Sbjct: 152 VFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDV 211
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM----------------- 400
A + F M A G N VT+ +++ A GL+ R F M
Sbjct: 212 AREMFDRMPAIG--RNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSV 269
Query: 401 -------RHVYLVEPH--VYHYACMIDILSRAGLFSEAERLIRSMPME----PDVFVWGA 447
R ++ V P V + CMI ++AG + + L R+M E P+ +
Sbjct: 270 NSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVS 329
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDP--LNHAFYVN--LCDMYAKAGRFDDVKKTRNLMK 503
+L C +E G V + ID LN+ + + L DMYAK GR D K N +
Sbjct: 330 VLSACANLTALEEGRWVHAF-IDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLD 388
Query: 504 ERGI 507
+ +
Sbjct: 389 RKNV 392
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 259/450 (57%), Gaps = 33/450 (7%)
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDV 172
+ + G L+ Y QML +G+ PD TF ++K C+ D +G ++ V+K +
Sbjct: 17 SQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHI 76
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM--- 229
QN++IS++ + A +F M+ RD++SW +MI G+ + G AL F+ M
Sbjct: 77 IAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQ 136
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEM--------------------QSSSVEEMV 269
+ ++ +WN+II GF G R+A+ F+EM Q+ V ++
Sbjct: 137 GRPDLVAWNAIIAGFAYG-ELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLL 195
Query: 270 K--------PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
K PD IT+ +VL A A +I+ G VH Y ++GL+CD + L+D+Y KC
Sbjct: 196 KLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKC 255
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G ++ A+ +F M D ++W+++I +A GYG+EA F+ M V+PNHVTFVG+L
Sbjct: 256 GSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVL 315
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
+AC+H GLVE+G + M + + P H +CM+D+L+RAG +EAE I M +PD
Sbjct: 316 TACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPD 375
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+ VW LL C+ HGNV++G++ A+ ++ +DP N A +V LC++YA G ++DV + R+L
Sbjct: 376 IVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSL 435
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGS 531
MK+RG+RK VPG S +EV +H F ++ S
Sbjct: 436 MKQRGVRK-VPGQSWIEVKDRIHVFFVEDS 464
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 16/279 (5%)
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
M +RN+ SW S+I G+ Q G+ ALE + +M S V PD+ T S++ AC+ LG
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSG----VMPDQFTFGSIIKACSSLGD 56
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
I G+ +H ++ +S ++ AL+ MY K + A VF M +D ++W +MI+
Sbjct: 57 IGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAG 116
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR-HVYLVE 407
F+ GY EA F+EM +G RP+ V + +++ A+ G + + F MR + LV
Sbjct: 117 FSQLGYELEALCYFKEMLHQG-RPDLVAWNAIIAGFAY-GELRDAIFFFEEMRCNADLVS 174
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPM---EPDVFVWGALLGGCQMHGNVELGEKV 464
+ ACM R E RL++ M + PD +LG ++E+G +V
Sbjct: 175 WNAILTACM-----RHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQV 229
Query: 465 AQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRNLM 502
Y + N L D+YAK G K + M
Sbjct: 230 HCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSM 268
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 134/294 (45%), Gaps = 47/294 (15%)
Query: 79 GSLSYATNVFSHIK-RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G L A F ++ +DL ++N ++ AC + + + +L K M + PD
Sbjct: 154 GELRDAIFFFEEMRCNADLVSWNAIL--TACMRHDQAE----EVFRLLKLMCISQHRPDY 207
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T +L + + +G V+ +K G+ D V N +I L+ CG + +A +FD
Sbjct: 208 ITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDS 267
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M N DVVSW+++I+GY + G + AL LF+ M++ +
Sbjct: 268 MINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLD------------------------ 303
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVD 316
VKP+ +T VL+AC+++G ++ G ++G + + G+ + +VD
Sbjct: 304 -----------VKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVD 352
Query: 317 MYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG---YGKEAFDTFREME 366
+ + GC+ A G +M D + W +++ +G GK A + +++
Sbjct: 353 LLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKID 406
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 284/526 (53%), Gaps = 48/526 (9%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL---SYATNVFS 89
+AI + L +IH II++ +Q L F +++SG L SY+ F
Sbjct: 8 SAIKSVSHKTRLLQIHAHIIRTTLIQYP-----TVSLQFLSRIALSGPLQDASYSQRFFG 62
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
+ + YN MIRA C S++ K L LY+ M GI+ D L+ F +K C +
Sbjct: 63 QLSHPLVSHYNTMIRA--CSMSDSPQ----KGLLLYRDMRRRGIAADPLSSSFAVKSCIR 116
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
L G V+ + K G D + +V+ L+ C A +FDEM +RD V+
Sbjct: 117 FLYLPGGVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVA---- 172
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
WN +I+ ++ R R+AL LF MQ SS +
Sbjct: 173 ---------------------------WNVMISCCIRNNRTRDALSLFDVMQGSSYK--C 203
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
+PD +T +L ACA+L A++ G+ +HGY+ G + + +L+ MY +CGC+++AY
Sbjct: 204 EPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSRCGCLDKAYE 263
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VFK M K+ ++W+AMIS A+NGYG+EA + F EM GV P+ TF G+LSAC++SG+
Sbjct: 264 VFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSACSYSGM 323
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V++G F M + V P+V+HY CM+D+L RAGL +A +LI SM ++PD +W LL
Sbjct: 324 VDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWRTLL 383
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G C++HG+V LGE+V +LI+L YV L ++Y+ AG ++ V + R LMK + I +
Sbjct: 384 GACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKNKSI-Q 442
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
PGCS++E+ G VHEF + E+ L+ ++ ++ G+
Sbjct: 443 TTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGY 488
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/480 (36%), Positives = 272/480 (56%), Gaps = 18/480 (3%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SG L A VF + D+ ++N M+ A D + + L +K++ +GI +
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYA------QDGNLHEALWFFKELRRSGIKFNE 179
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+F LL C K + +GQV+ G +V + S+I + CG + SA+ FDE
Sbjct: 180 FSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M+ +D+ W +I GY + GD++ A LFR M ++N SW ++I G+V+ G AL+LF
Sbjct: 240 MTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLF 299
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
++M + VKP++ T +S L A A + ++ HGK +HGY+ R+ + + ++ ++L+DM
Sbjct: 300 RKM----IAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDM 355
Query: 318 YGKCGCVERAYGVFKE-MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
Y K G +E + VF+ K+D + W MIS A +G G +A +M V PN T
Sbjct: 356 YSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTT 415
Query: 377 FVGLLSACAHSGLVEKG-RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
V +L+AC+HSGLVE+G RW F M + + P HYAC+ID+L RAG F E I
Sbjct: 416 LVVILNACSHSGLVEEGVRW-FESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEE 474
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP EPD +W A+LG C++HGN ELG+K A+ LI LDP + A Y+ L +YA G+++ V
Sbjct: 475 MPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKWELV 534
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMK----GSPKVVKEELVLILNGLSKIMK 551
+K R +MK+R + KE S +E++ V F++ KEE+ IL+ L+ +M+
Sbjct: 535 EKLRGIMKKRRVNKE-KAVSWIEIENKVKAFTVSDGSHAHAHARKEEIYFILHNLAALME 593
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 164/336 (48%), Gaps = 47/336 (13%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+ + N +I ++M CG A +FD+M R++ SWN M+ G+++SG L A +F M
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMP 140
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+R++ SWN+++ G+ Q G EAL F+E++ S +K ++ + A +L+AC +
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSG----IKFNEFSFAGLLTACVKSRQLQ 196
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY---------------------- 328
+ HG + +G +VV+ +++D Y KCG +E A
Sbjct: 197 LNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYA 256
Query: 329 ---------GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
+F+EMP+K+ ++WTA+I+ + G G A D FR+M A V+P TF
Sbjct: 257 KLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFSS 316
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRS 435
L A A + G+ H Y+ V P+ + +ID+ S++G +ER+ R
Sbjct: 317 CLCASASIASLRHGKQI-----HGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVFRI 371
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
+ D +W ++ HG LG K Q L D+
Sbjct: 372 CYDKQDCVLWNTMISALAQHG---LGHKALQMLDDM 404
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLD-CDVVIGTALVDMYGKC------------- 321
+AS+L C ++ GKW+H +L+ +G + ++ L+ MY KC
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 322 ------------------GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
G + RA VF MP++D ++W M+ +A +G EA F+
Sbjct: 109 HLRNLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFK 168
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
E+ G++ N +F GLL+AC S ++ + + + +V +ID ++
Sbjct: 169 ELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLS-NVVLSCSIIDAYAKC 227
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
G A+R M ++ D+ +W L+ G G++E +K+ + + + +P++ + L
Sbjct: 228 GQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVS---WTALI 283
Query: 484 DMYAKAGRFD 493
Y + G D
Sbjct: 284 AGYVRQGSGD 293
>gi|224136906|ref|XP_002322445.1| predicted protein [Populus trichocarpa]
gi|222869441|gb|EEF06572.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 192/538 (35%), Positives = 275/538 (51%), Gaps = 83/538 (15%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSY 83
K S K +L ++I CK ++ K+IH Q+I S + +ND ++ R F A + + Y
Sbjct: 5 KHSLKWVLLDSIQRCKKLKIFKKIHAQLITSGVV-SND--LVVNRAAEFFAKGPNFA-DY 60
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A + S ++ G P TFP +
Sbjct: 61 ACDFLSQME--------------------------------------DGFLPYMFTFPAV 82
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
LK C K + G V+G + K D++V+NS++ + CG + A +FDEM RD
Sbjct: 83 LKSCAKFMAVDEGRQVHGVIAKMDFVCDIYVENSLVHFYSVCGSLDDASRVFDEMLVRDA 142
Query: 204 VSW----------------------------------NAMIIGYLRSGDLDVALDLFRRM 229
VSW NA++ Y++ L +F +
Sbjct: 143 VSWTGVIYPGIKGYLILGKGIHGLIIERGFGLGLEVSNALMDMYVKCESLPEEKQVFDEL 202
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
+++I SW SII G VQ +E LELF ++QSS +E PD I + SVLSA A GA+
Sbjct: 203 PEKDIVSWTSIICGMVQCKFPKEVLELFCDVQSSGIE----PDGIILTSVLSARASPGAL 258
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
D+G+ V Y+ + D+ IGTA+VDMY KCGC+E A +F MP K+ L W AM++
Sbjct: 259 DYGRLVREYIDHKAIKWDIQIGTAVVDMYAKCGCIEMAMQIFNVMPHKNVLTWNAMLNGL 318
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR-HVYLVEP 408
A++G+G++A F EM EG+RPN VTF+ L+AC H G V +GR F M+ Y + P
Sbjct: 319 AMHGHGQKALQLFEEMVREGMRPNEVTFLVTLTACCHCGFVGEGRRYFHWMKSQQYNLPP 378
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ HY CM+D+L RAGL EA L ++MPM PDV + GALL C+ +GNVEL ++ L
Sbjct: 379 RLEHYGCMVDLLCRAGLLDEALELTKAMPMLPDVRIMGALLSTCKANGNVELPREILDRL 438
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++ D + YV L ++ A R+ DV + R LMK GI K PG S +EVDG HE
Sbjct: 439 VEFDSRDSGVYVLLSNILAINQRWADVTRIRRLMK-MGIEK-TPGSSVIEVDGKAHEI 494
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 249/398 (62%), Gaps = 10/398 (2%)
Query: 133 ISPDCLTFPFLLKECTK--RLDGLVGASVYGQVVKFGV--CDDVFVQNSVISLFMACGFV 188
I P+ +TF LL C +G ++ K G+ C+ + V +++ ++ CG V
Sbjct: 6 IDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCN-LMVGTALVDMYAKCGHV 64
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
+R+ FDE+ ++ SWN MI G++R+G + A+++F M +R + SW +I GFV+ G
Sbjct: 65 ELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMG 124
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
EALE F++MQ S VE PD++TI +VLSACA LGA+ G WVH Y + GL +V
Sbjct: 125 LFEEALEWFRKMQVSKVE----PDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNV 180
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
I +L+D+Y +CG +E A VF++M ++ ++W ++I A NG+ +EA + F M+ +
Sbjct: 181 KICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQ 240
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
G +PN V+F G L+AC+H+GLV++G F +M V+ + P + HY C++D+ SRAG +
Sbjct: 241 GFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLED 300
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A ++++MPM+P+ V G+LL C+ G+VEL E++ YL+ LDP + YV L ++YA
Sbjct: 301 AMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYAA 360
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
GR+D K R MK GI+K+ PG SS+E+ +HEF
Sbjct: 361 VGRWDGACKQRMTMKALGIQKK-PGFSSIEIGCDIHEF 397
>gi|326496937|dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/407 (39%), Positives = 232/407 (57%), Gaps = 36/407 (8%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA--- 191
PD L+ F L CT+ V + ++ V+ G DV+V ++ +S + V SA
Sbjct: 70 PDHLSLSFSLHSCTRSPSLPVASLLHSFAVRLGHARDVYVLSAAVSAYFRATDVASAERL 129
Query: 192 -----------------------------RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
R FD M R+VVSWNAM+ Y +G L A
Sbjct: 130 FSYTKDVADVVTWTTMVTGHANTGDLERARWFFDAMPERNVVSWNAMLGAYASAGMLSKA 189
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
LF M RN SW+S++TG V+ R EAL +F EM + V P++ + S +SA
Sbjct: 190 RKLFDIMPSRNAASWSSMVTGLVRSNRCEEALRVFSEM----IGMGVVPNESALVSAVSA 245
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
C+ L +++HG WVH Y +R +V+ TA+VDMYGKCG + A VF MP K+ +W
Sbjct: 246 CSLLRSLEHGVWVHAYAKRELQGMSLVLATAIVDMYGKCGGIHNAVRVFAAMPVKNIYSW 305
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
+MI+ A+NG +A F +M+ GVRPN +TF+GLL AC+HSGLV++GRW F MM +
Sbjct: 306 NSMITGLAMNGREMQALSLFWKMQMAGVRPNDITFIGLLGACSHSGLVDEGRWLFNMMVN 365
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
+ ++P HY M+D+L RAG EA + SMP+EP +WGAL G C++HG VELGE
Sbjct: 366 GFGIQPVQEHYGLMVDLLGRAGHVREAVDFVNSMPVEPHPGLWGALAGACKIHGEVELGE 425
Query: 463 KVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
++A+ LI+L+P + + Y+ L ++Y + R+DD+ R L+K+R + K
Sbjct: 426 EIAKKLIELEPRHGSRYILLSNIYGASNRWDDMATVRRLLKDRKVPK 472
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/479 (35%), Positives = 267/479 (55%), Gaps = 46/479 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS+ VF DL ++N ++ + +ET DT L+++ QML G +P+
Sbjct: 480 GSVQDGCRVFEATTNRDLISWNALL--SGFHDNETCDTG----LRIFNQMLAEGFNPNMY 533
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +L+ C+ D +G V+ Q+VK + + FV +++ ++ F+ A +F+
Sbjct: 534 TFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFN-- 591
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
R+ KR++F+W I+ G+ Q G+ +A++ F
Sbjct: 592 -----------------------------RLIKRDLFAWTVIVAGYAQDGQGEKAVKCFI 622
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+MQ E VKP++ T+AS LS C+ + +D G+ +H ++G D+ + +ALVDMY
Sbjct: 623 QMQ----REGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMY 678
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCGCVE A VF + +DT++W +I ++ +G G +A F M EG P+ VTF+
Sbjct: 679 AKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFI 738
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+LSAC+H GL+E+G+ F + +Y + P + HYACM+DIL RAG F E E I M +
Sbjct: 739 GVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKL 798
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+V +W +LG C+MHGN+E GE+ A L +L+P + Y+ L +M+A G +DDV
Sbjct: 799 TSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNV 858
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF-SMKGS-PKVVKEELVLILNGLSKIMKNGGF 555
R LM RG++KE PGCS VEV+G VH F S GS PK+ E+ L L L + + + G+
Sbjct: 859 RALMSTRGVKKE-PGCSWVEVNGQVHVFLSHDGSHPKI--REIHLKLQDLHQKLMSVGY 914
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 220/500 (44%), Gaps = 86/500 (17%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
++ E K IH Q+IKS + + H +SL+ + GS +YA VF I D+
Sbjct: 143 DLNEGKAIHGQVIKSG-INPDSHLWNSLVN------VYAKCGSANYACKVFGEIPERDVV 195
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
++ +I + + + + L+ +M G+ + T+ LK C+ LD G
Sbjct: 196 SWTALI------TGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGK 249
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
V+ + +K G D+FV ++++ L+ CG + A +F M ++ VSWNA++ G+ + G
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309
Query: 218 DLDVALDLFRRMKKRNI----FSWNSIITGFVQGGRAR---------------------- 251
D + L+LF RM I F+ ++++ G G R
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369
Query: 252 -------------EALELF-------------------QEMQSSSVEEMVK--------P 271
+AL++F Q+ QS E+ K P
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP 429
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
++ T+AS++SA LG + +G+ +H + + G + D + ALV MY K G V+ VF
Sbjct: 430 NQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVF 489
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+ +D ++W A++S F N F +M AEG PN TF+ +L +C+ V+
Sbjct: 490 EATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVD 549
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
G+ + L + + + ++D+ ++ +AE + + ++ D+F W ++ G
Sbjct: 550 LGKQVHAQIVKNSL-DGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAG 607
Query: 452 CQMHGNVELGEKVAQYLIDL 471
G GEK + I +
Sbjct: 608 YAQDGQ---GEKAVKCFIQM 624
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 149/307 (48%), Gaps = 37/307 (12%)
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
+L+ C + D G +++GQV+K G+ N D
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGI-------------------------------NPD 162
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
WN+++ Y + G + A +F + +R++ SW ++ITGFV G A+ LF EM+
Sbjct: 163 SHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRR 222
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
VE ++ T A+ L AC+ ++ GK VH + G D+ +G+ALVD+Y KCG
Sbjct: 223 EGVE----ANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCG 278
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
+ A VF MPK++ ++W A+++ FA G ++ + F M + + T +L
Sbjct: 279 EMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLK 338
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
CA+SG + G+ + + E + C++D+ S+ GL +A ++ + +PDV
Sbjct: 339 GCANSGNLRAGQIVHSLAIRIG-CELDEFISCCLVDMYSKCGLAGDALKVFVRIE-DPDV 396
Query: 443 FVWGALL 449
W A++
Sbjct: 397 VSWSAII 403
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 10/187 (5%)
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+ +L CA G ++ GK +HG + +SG++ D + +LV++Y KCG A VF E+P+
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
+D ++WTA+I+ F GYG A + F EM EGV N T+ L AC+ +E G+
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGK-- 249
Query: 397 FVMMRHVYLVE----PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
H ++ ++ + ++D+ ++ G AER+ MP + V W ALL G
Sbjct: 250 ---QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAV-SWNALLNGF 305
Query: 453 QMHGNVE 459
G+ E
Sbjct: 306 AQMGDAE 312
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 263/440 (59%), Gaps = 6/440 (1%)
Query: 118 SGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS 177
S + L ++ +M G+ PD +T L C + D +VGA +G +VK G+ N+
Sbjct: 99 SDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNA 158
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
V+ ++ G + AR +F EM + VVSW ++ G +RS + +F M +RN +W
Sbjct: 159 VMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAW 218
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
+I G++ G +E+ L +EM E+ + +T+ S+L+AC+ G + G+WVH
Sbjct: 219 TIMIAGYLDSGLTQESFALVREMIFDLEMEL---NYVTLCSILTACSQSGDLMMGRWVHA 275
Query: 298 Y-LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
Y L+ + ++++GTA+VDMY KCG + A+ FK+MP+++ ++W AM+S A++G G+
Sbjct: 276 YALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGR 335
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
A D F +M E +P+ VTF +LSAC+HSGLV++G + F + VY + P V HYACM
Sbjct: 336 AALDIFPQMFKEA-KPDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACM 394
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
+D+L RAG EAE L+R MP+ P+ V G+LLG C +HG ++LGE + Q L+ LDP N
Sbjct: 395 VDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNT 454
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVK 536
+++ L +MYA AG+ + R ++K+RGI+K VPG SS+ V G VH+FS
Sbjct: 455 EYHILLSNMYALAGKQNRANSLRQVLKKRGIKK-VPGMSSIHVGGQVHQFSAGDKSHPRT 513
Query: 537 EELVLILNGLSKIMKNGGFG 556
E+ +L+ + ++ G+
Sbjct: 514 REVYNMLDEMIPRLRLAGYA 533
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 159/362 (43%), Gaps = 72/362 (19%)
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVC--DDVFVQNSVISLFMACGFV 188
T +S + FLL+ C + +G ++ ++ G+ + F+ N+++ + +CG
Sbjct: 7 TALSSVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCA 66
Query: 189 TSARMLFDEM--SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
AR +FDE+ S++D V W +++ FV+
Sbjct: 67 WQARKVFDEIPHSHKDTVDWT-------------------------------TLMGCFVR 95
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
+ EAL +F EM+ VKPD++T+ + CA LG + G HG + + GL
Sbjct: 96 HNVSDEALLIFVEMRRCG----VKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGG 151
Query: 307 DVVIGTALVDMYGKCGC-------------------------VERAYG------VFKEMP 335
A++DMY K G V R+ G VF EMP
Sbjct: 152 VEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMP 211
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGR 394
+++ +AWT MI+ + +G +E+F REM + + N+VT +L+AC+ SG + GR
Sbjct: 212 ERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGR 271
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
W E ++ M+D+ ++ G A + + MP + +V W A+L G M
Sbjct: 272 WVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMP-QRNVVSWNAMLSGLAM 330
Query: 455 HG 456
HG
Sbjct: 331 HG 332
>gi|125562063|gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
Length = 567
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 228/343 (66%), Gaps = 7/343 (2%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+V NS+++ F G + AR +FDEM R++VSWNAM+ GY + D+D A +LF M
Sbjct: 225 NVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMP 284
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
++++ SW +I+G+ Q GR ++ LELF+ MQ+ E V+P+++T+ SVLSACA L A++
Sbjct: 285 EKDVVSWTCMISGYAQAGRYQDTLELFRAMQT---ESNVQPNEVTMVSVLSACANLTALE 341
Query: 291 HGKWVHGYLRRSG--LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
G+WVH ++ + L+ + +G AL+DMY KCG + A +F + +K+ AW A+I+
Sbjct: 342 EGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITR 401
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
A+NG +++ D F +M+ G +PN +TFVG+L+AC+H GLV++GR CF M V+P
Sbjct: 402 LAMNGNAQDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQP 461
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
V HY CM+D+L RAGL EAE LIRSMPM PDV V+GALLG C+MH ++ E+V +
Sbjct: 462 EVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKRFDVAERVQSEI 521
Query: 469 --IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
++L+ +V + D+YA AG++ DV + R +++ GIRK
Sbjct: 522 HSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGIRK 564
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 188/404 (46%), Gaps = 89/404 (22%)
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
S + +NI+IRA+A +S + +L G+ PD T P LL K L
Sbjct: 57 SATFLHNILIRASASSASPR------LSFAAFSSLLRCGLVPDRFTLPPLLGSAGK-LPA 109
Query: 154 L--VGASVYGQVVKFGVCDDVFVQNSVISLFMA--------------------------- 184
GA V+ Q V+ G DVFV N++++++ A
Sbjct: 110 FPRTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVI 169
Query: 185 -----CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK--RNIFSW 237
CG + SA+ +FDEM R+ VSW+ M+ GY +G+LDVA ++F RM RN+ +W
Sbjct: 170 GGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGRNVVTW 229
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
NS++TGF + G A ++F EM + +++S A L G
Sbjct: 230 NSMVTGFARHGLLPLARKMFDEM--------------PVRNLVSWNAML---------RG 266
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
Y S +D A +F MP+KD ++WT MIS +A G ++
Sbjct: 267 YSVNSDMDG--------------------ARELFDVMPEKDVVSWTCMISGYAQAGRYQD 306
Query: 358 AFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY-AC 415
+ FR M+ E V+PN VT V +LSACA+ +E+GRW + +V + Y+ A
Sbjct: 307 TLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAA 366
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ID+ ++ G A ++ S+ + +V W AL+ M+GN +
Sbjct: 367 LIDMYAKCGRTDIAVKIFNSLDRK-NVSAWNALITRLAMNGNAQ 409
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 120/304 (39%), Gaps = 70/304 (23%)
Query: 271 PDKITIASVLSACAYLGAIDH-GKWVHGYLRRSGLDCDVVIGTALVDMYG---------- 319
PD+ T+ +L + L A G VH R G DV + AL+ MYG
Sbjct: 92 PDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMRE 151
Query: 320 ----------------------KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
KCG +E A VF EMP+++ ++W+ M+ +A G
Sbjct: 152 VFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDV 211
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM----------------- 400
A + F M A G N VT+ +++ A GL+ R F M
Sbjct: 212 AREMFDRMPAIG--RNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSV 269
Query: 401 -------RHVYLVEPH--VYHYACMIDILSRAGLFSEAERLIRSMPME----PDVFVWGA 447
R ++ V P V + CMI ++AG + + L R+M E P+ +
Sbjct: 270 NSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVS 329
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDP--LNHAFYVN--LCDMYAKAGRFDDVKKTRNLMK 503
+L C +E G V + ID LN+ + + L DMYAK GR D K N +
Sbjct: 330 VLSACANLTALEEGRWVHAF-IDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLD 388
Query: 504 ERGI 507
+ +
Sbjct: 389 RKNV 392
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/416 (38%), Positives = 249/416 (59%), Gaps = 48/416 (11%)
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYL--------------------------------- 214
V SAR LFDE+ +RDV+SWN+MI GY+
Sbjct: 201 VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELT 260
Query: 215 ----------RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
+SG+L+ A+ +F M +R++ SW S+I G+ + G + ++ LF EM+
Sbjct: 261 LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEME--- 317
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
+E + P+ IT+A +L ACA L A++ G+ +HG++ R+G D + ALVDMY KCG +
Sbjct: 318 -KEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGAL 376
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
A +F +P+KD ++WT MI+ + ++GYG EA F EM G+ P+ V+F+ +L AC
Sbjct: 377 GLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYAC 436
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+HSGL+++G F MMR+ +EP HYAC++D+L+RAG S+A + I+ MP+EPD +
Sbjct: 437 SHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATI 496
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
WGALL GC+++ +V+L EKVA+++ +L+P N +YV L ++YA+A ++++VKK R +
Sbjct: 497 WGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGR 556
Query: 505 RGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIR 560
RG+RK PGCS +E+ G VH F S + ++ L+L MK G +R
Sbjct: 557 RGLRKN-PGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMR 611
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 148/305 (48%), Gaps = 53/305 (17%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D + + ++ +++ CG + R +FD+++N V WN ++ GY + G+ +L LF+RM+
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR 194
Query: 231 K------------------RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+ R++ SWNS+I+G+V G + + L+LF++M + D
Sbjct: 195 ELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG----INTD 250
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
T+ SV ++ + L+DMY K G + A VF+
Sbjct: 251 LATMVSV---------------------------ELTLNNCLLDMYSKSGNLNSAIQVFE 283
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
M ++ ++WT+MI+ +A G + F EME E + PN +T +L ACA +E+
Sbjct: 284 TMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALER 343
Query: 393 GRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
G+ ++R+ + ++ HV + ++D+ + G A RL+ M E D+ W ++ G
Sbjct: 344 GQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLA-RLLFDMIPEKDLVSWTVMIAG 400
Query: 452 CQMHG 456
MHG
Sbjct: 401 YGMHG 405
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 49/276 (17%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S SG+L+ A VF + + ++ MI A + S ++L+ +M + P
Sbjct: 270 SKSGNLNSAIQVFETMGERSVVSWTSMIAGYA------REGLSDMSVRLFHEMEKEDLFP 323
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
+ +T +L C G ++G +++ G D V N+++ +++ CG + AR+LF
Sbjct: 324 NSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLF 383
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D + +D+VSW MI GY G EA+
Sbjct: 384 DMIPEKDLVSWTVMIAGY-------------------------------GMHGYGSEAIA 412
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT--- 312
F EM++S +E PD+++ S+L AC++ G +D G W G+ +C + +
Sbjct: 413 AFNEMRNSGIE----PDEVSFISILYACSHSGLLDEG-W--GFFNMMRNNCCIEPKSEHY 465
Query: 313 -ALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
+VD+ + G + +AY K MP + D W A++
Sbjct: 466 ACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 501
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 28/244 (11%)
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
I +N I F + G R A+EL + +E T SVL CA L +I G+
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDLELR------TYCSVLQLCADLKSIQDGR 121
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG 353
+H ++ + ++ D V+G+ LV MY CG + +F ++ + W +++ +A G
Sbjct: 122 RIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIG 181
Query: 354 YGKEAFDTFREMEAEGVR--------------PNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+E+ F+ M G+R + +++ ++S +GL EKG F
Sbjct: 182 NFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQ 241
Query: 400 MRHV-------YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
M + +V + C++D+ S++G + A ++ +M E V W +++ G
Sbjct: 242 MLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAGY 300
Query: 453 QMHG 456
G
Sbjct: 301 AREG 304
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 257/425 (60%), Gaps = 13/425 (3%)
Query: 110 SSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVC 169
SS H + + L+ +M G+ P +L C G ++G +VK G
Sbjct: 248 SSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFN 307
Query: 170 DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
D +F +N++I+L+ G V A LF EM +++VSWNA+I + SG D AL+L ++
Sbjct: 308 DYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQL 367
Query: 230 KKR--------NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
+K N+ +W++II GF G E+LE+F++MQ ++V K + +TIASVLS
Sbjct: 368 EKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANV----KANSVTIASVLS 423
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
CA L A++ G+ +HG++ R+ +D +V++G L++MY KCG + + VF+++ +D+++
Sbjct: 424 ICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSIS 483
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
W +MI+ + +G GK+A TF M G RP+ VTF+ LSAC+H+GLV +G W F MR
Sbjct: 484 WNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMR 543
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
+ +EP + HYACM+D+L RAGL EA +I+ MPMEP+ ++W +LL C+MH + +L
Sbjct: 544 QNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPMEPNAYIWSSLLNSCRMHKDTDLA 603
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
E+ A + +L+ ++ L +++A + R++D + R + +G++K VPG S +EV
Sbjct: 604 EEAAAKISNLNSKITGSHMLLSNIFAASCRWEDSARVRISARAKGLKK-VPGWSWIEVKK 662
Query: 522 VVHEF 526
V+ F
Sbjct: 663 KVYMF 667
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 228/493 (46%), Gaps = 39/493 (7%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK-- 92
+ +C ++ K++H S + T + S S G +S A VF
Sbjct: 45 LRQCNGIQHSKQVH-----SATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFE 99
Query: 93 -RSDLYTYNIMIRANACKSSETNDTHSGKC---LKLYKQMLCTGISPDCLTFPFLLKECT 148
S+ +N +IRAN + G C L+LY +M G+ D TFP LL+ +
Sbjct: 100 CYSNFLLWNSIIRAN---------VYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASS 150
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+ +++ VV+FG + + V N +I ++ + AR +FD+M + VVSWN
Sbjct: 151 NLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNT 210
Query: 209 MIIGYLRSGDLDVALDLFRRMK----KRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
M+ GY + D++ A +F +M+ + N +W S+++ + G E + LF +M+
Sbjct: 211 MVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKG 270
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
V P +A VLS CA L ++ G+ +HGY+ + G + + AL+ +YGK G V
Sbjct: 271 ----VGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGV 326
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA----EGVRPNHVTFVGL 380
A +F EM K+ ++W A+IS FA +G +A + ++E ++PN +T+ +
Sbjct: 327 GDAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAI 386
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI---LSRAGLFSEAERLIRSMP 437
+ A GL E+ F M+ + V+ + A ++ I L+ L E +
Sbjct: 387 ICGFASKGLGEESLEVFRKMQ-LANVKANSVTIASVLSICAMLAALNLGREMHGHVIRAR 445
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M+ +V V L+ G+ + G V + L + D ++ + ++ Y G D
Sbjct: 446 MDDNVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSIS---WNSMIAGYGTHGLGKDALA 502
Query: 498 TRNLMKERGIRKE 510
T N M + G R +
Sbjct: 503 TFNHMIKSGYRPD 515
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/458 (35%), Positives = 268/458 (58%), Gaps = 18/458 (3%)
Query: 82 SYATNVFSHIKRSDLY---------TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG 132
++ T + +++ DL T +I + NA S + + L ++M G
Sbjct: 210 AWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLG 269
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDD----VFVQNSVISLFMACGFV 188
I D T+ ++ + +G V+ V++ V + V N++I+L+ CG +
Sbjct: 270 IQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKL 329
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
AR +FD+M +D+VSWNA++ G + + ++ A +FR M R++ +W +I+G Q G
Sbjct: 330 VEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNG 389
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
E L+LF +M+ +E P A +++C+ LG++D+G+ +H + + G D +
Sbjct: 390 FGEEGLKLFNQMKLEGLE----PCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSL 445
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
+G AL+ MY +CG VE A VF MP D+++W AMI+ A +G+G +A + +M E
Sbjct: 446 SVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKE 505
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
+ P+ +TF+ +LSAC+H+GLV++GR F MR Y + P HY+ +ID+L RAG+FSE
Sbjct: 506 DILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSE 565
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A+ + SMP EP +W ALL GC +HGN+ELG + A L++L P Y++L +MYA
Sbjct: 566 AKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAA 625
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
G++D+V + R LM+ERG++KE PGCS +EV+ +VH F
Sbjct: 626 LGQWDEVARVRKLMRERGVKKE-PGCSWIEVENMVHVF 662
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 225/500 (45%), Gaps = 75/500 (15%)
Query: 65 LITRLLFFCALSVSGSLSYATNVFSHIKRS--DLYTYNIMIRANACKSSETNDTHSGKCL 122
++ A S +G++ A +F+ S D +YN MI A S ++D H+ L
Sbjct: 62 IVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITA----FSHSHDGHAA--L 115
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG-ASVYGQVVKFGVCDDVFVQNSVISL 181
+L+ QM G PD TF +L + D ++ +V K+G V N+++S
Sbjct: 116 QLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSC 175
Query: 182 FMACG---------FVTSARMLFDEMS--NRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+++C + +AR LFDE RD +W +I GY+R+ DL A +L M
Sbjct: 176 YVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMT 235
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+WN++I+G+V G EA +L + M S ++ D+ T SV+SA + G +
Sbjct: 236 DHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQL----DEYTYTSVISAASNAGLFN 291
Query: 291 HGKWVHGYLRRSGLDCD----VVIGTALVDMYGKC------------------------- 321
G+ VH Y+ R+ + + + AL+ +Y +C
Sbjct: 292 IGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAIL 351
Query: 322 -GCV-----ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
GCV E A +F+EMP + L WT MIS A NG+G+E F +M+ EG+ P
Sbjct: 352 SGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDY 411
Query: 376 TFVGLLSACAHSGLVEKGRWC---FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
+ G +++C+ G ++ G+ + + H + + +I + SR GL A+ +
Sbjct: 412 AYAGAIASCSVLGSLDNGQQLHSQIIQLGH----DSSLSVGNALITMYSRCGLVEAADTV 467
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLCDM--Y 486
+MP D W A++ HG+ ++L EK+ + I D + ++ C
Sbjct: 468 FLTMPYV-DSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGL 526
Query: 487 AKAGR--FDDVKKTRNLMKE 504
K GR FD ++ + E
Sbjct: 527 VKEGRHYFDTMRVCYGITPE 546
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 63/348 (18%)
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
+V+ ++ G + N +I + + AR LFD++ D+V+ M+ Y +G
Sbjct: 17 AVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAG 76
Query: 218 DLDVALDLFRR--MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
++ +A LF M R+ S+N++IT F AL+LF +M+ PD T
Sbjct: 77 NIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLG----FVPDPFT 132
Query: 276 IASVLSACAYLGAID-HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG-------CV--E 325
+SVL A + + + H + +H + + G + AL+ Y C CV
Sbjct: 133 FSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMA 192
Query: 326 RAYGVFKEMP--KKDTLAWT-------------------------------AMISVFALN 352
A +F E P ++D AWT AMIS +
Sbjct: 193 AARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHR 252
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY- 411
G+ +EAFD R M + G++ + T+ ++SA +++GL GR H Y++ V
Sbjct: 253 GFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQV-----HAYVLRTVVQP 307
Query: 412 --HYA-----CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
H+ +I + +R G EA R+ MP++ D+ W A+L GC
Sbjct: 308 SGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGC 354
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 285 YLGAIDH---GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
YL + H + VH ++ SG +I L+D Y K + A +F ++PK D +A
Sbjct: 5 YLAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVA 64
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
T M+S ++ G K A F +R + V++ +++A +HS FV M+
Sbjct: 65 ATTMLSAYSAAGNIKLAHQLFNATPM-SIR-DTVSYNAMITAFSHSHDGHAALQLFVQMK 122
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+ V P + ++ ++ LS L ++ E + + E VF WGAL
Sbjct: 123 RLGFV-PDPFTFSSVLGALS---LIADEETHCQQLHCE--VFKWGAL 163
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/453 (37%), Positives = 266/453 (58%), Gaps = 18/453 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDC 137
G + VF + + D+ ++N +I SS + + ++K+M + + D
Sbjct: 95 GKIEITHKVFDEMPQRDVVSWNGLI------SSYVGNGRFEDAIGVFKRMSQESNLKFDE 148
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVV-KFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
T L C+ + +G +Y VV +F + V + N+++ +F CG + AR +FD
Sbjct: 149 GTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNALVDMFCKCGCLDKARAVFD 206
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
M +++V W +M+ GY+ +G +D A LF R +++ W +++ G+VQ R EALEL
Sbjct: 207 SMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALEL 266
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F+ MQ++ + +PD + S+L+ CA GA++ GKW+HGY+ + + D V+GTALVD
Sbjct: 267 FRCMQTAGI----RPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVD 322
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCGC+E A VF E+ ++DT +WT++I A+NG A D + EME GVR + +T
Sbjct: 323 MYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAIT 382
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FV +L+AC H G V +GR F M + V+P H +C+ID+L RAGL EAE LI M
Sbjct: 383 FVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Query: 437 PMEPD---VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
E D V V+ +LL + +GNV++ E+VA+ L ++ + + + L +YA A R++
Sbjct: 443 RGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWE 502
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
DV R MK+ GIRK PGCSS+E+DGV HEF
Sbjct: 503 DVTNVRRKMKDLGIRK-FPGCSSIEIDGVGHEF 534
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 184/403 (45%), Gaps = 82/403 (20%)
Query: 89 SHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECT 148
S ++ L YN M+++ A S T K L L+ ++ G+ PD T P +LK
Sbjct: 4 SLLQTPSLLMYNKMLKSLADGKSFT------KVLALFGELRGQGLYPDNFTLPVVLKSIG 57
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+ + G V+G VK G+ D +V NS++ ++ + G + +FDEM RDVVSWN
Sbjct: 58 RLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNG 117
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+I Y+ +G + A+ +F+RM S E
Sbjct: 118 LISSYVGNGRFEDAIGVFKRM----------------------------------SQESN 143
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
+K D+ TI S LSAC+ L ++ G+ ++ ++ + + V IG ALVDM+ KCGC+++A
Sbjct: 144 LKFDEGTIVSTLSACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKAR 202
Query: 329 GVFKEM-------------------------------PKKDTLAWTAMISVFALNGYGKE 357
VF M P KD + WTAM++ + E
Sbjct: 203 AVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDE 262
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV----YHY 413
A + FR M+ G+RP++ V LL+ CA +G +E+G+W H Y+ E V
Sbjct: 263 ALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWI-----HGYINENRVTVDKVVG 317
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
++D+ ++ G A + + E D W +L+ G M+G
Sbjct: 318 TALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMNG 359
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 298/542 (54%), Gaps = 27/542 (4%)
Query: 33 NAIDECKNMREL---KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFS 89
+++ C + L K++H Q+I++ S + L C G A VFS
Sbjct: 296 SSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKC-----GCFKEAKRVFS 350
Query: 90 HIKRSDLYTYNIMIRA---NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
++ + ++ ++I C S + ++L+ QM ++ D L+
Sbjct: 351 SLRDRNSVSWTVLIGGFLQYGCFS---------ESVELFNQMRAELMAVDQFALATLISG 401
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
C +D +G+ ++ +K G V V NS+IS++ CG + +A ++F+ M+ RD+VSW
Sbjct: 402 CCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSW 461
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
MI Y + G++ A + F M RN+ +WN+++ ++Q G + L+++ +M + E
Sbjct: 462 TGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLT---E 518
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+ V PD +T ++ CA +GA G + G+ + GL D + A++ MY KCG +
Sbjct: 519 KDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISE 578
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A F + +KD ++W AMI+ ++ +G GK+A + F ++ +G +P+++++V +LS C+H
Sbjct: 579 ARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSH 638
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
SGLVE+G++ F MM+ + + P + H++CM+D+L RAG EA+ LI MPM+P VWG
Sbjct: 639 SGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWG 698
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALL C+ HGN +L E A++L DLD Y+ L MYA AG+ DD + R LM+++G
Sbjct: 699 ALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKG 758
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSMEA 566
I+K PG S +EV+ VH F + V +++ I L ++M+ Y+R S +
Sbjct: 759 IKKS-PGYSWMEVNNRVHVFK---AEDVSHPQVIAIREKLDELMEKIAHLGYVRTESPRS 814
Query: 567 QV 568
++
Sbjct: 815 EI 816
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 229/487 (47%), Gaps = 87/487 (17%)
Query: 144 LKECTKRLDGLVGA-SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR-MLFDEMSNR 201
L+ C R L GA +++ +++ G+ VF+QN+++ +++CG ++ AR +L DE++
Sbjct: 32 LRSCGAR-SALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEP 90
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
+V++ N M+ GY + G L A++LF RM R++ SWN+I++G+ Q G+ AL++F M+
Sbjct: 91 NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
+ P+ T V+ +C LG + + G L + D + TALVDM +C
Sbjct: 151 QTGDS---LPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRC 207
Query: 322 GC-------------------------------VERAYGVFKEMPKKDTLAWTAMISVFA 350
G V+ A +FK MP++D ++W +IS +
Sbjct: 208 GAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALS 267
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHVYLVEPH 409
+G +EA D +M +GVRP+ T+ L+ACA +E G+ V ++R++ ++P+
Sbjct: 268 KSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPY 327
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG----NVELGEKVA 465
V + M+++ ++ G F EA+R+ S+ + + W L+GG +G +VEL ++
Sbjct: 328 V--ASAMVELYAKCGCFKEAKRVFSSL-RDRNSVSWTVLIGGFLQYGCFSESVELFNQMR 384
Query: 466 QYLIDLDPLNHAFYVNLC--------------------------------DMYAKAGRFD 493
L+ +D A ++ C MYAK G
Sbjct: 385 AELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQ 444
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNG 553
+ + N M ER I V G++ +S G+ + E ++ + I N
Sbjct: 445 NAELIFNFMAERDI---------VSWTGMITAYSQVGNIAKAR-EFFDDMSTRNVITWNA 494
Query: 554 GFGQYIR 560
G YI+
Sbjct: 495 MLGAYIQ 501
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 201/432 (46%), Gaps = 42/432 (9%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
++IT + + GSLS A +F + D+ ++N ++ N L
Sbjct: 91 NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLN------ALD 144
Query: 124 LYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
++ M TG S P+ TF ++K C V + G + KF DD VQ +++ +
Sbjct: 145 IFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDML 204
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
+ CG + A F + N ++ N+M++GY +S +D AL++F+ M +R++ SWN +I+
Sbjct: 205 VRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVIS 264
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
+ GR REAL++ +M V +PD T S L+ACA L +++ GK +H + R+
Sbjct: 265 ALSKSGRVREALDMVVDMHGKGV----RPDSTTYTSSLTACARLSSLEWGKQLHVQVIRN 320
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
D + +A+V++Y KCGC + A VF + +++++WT +I F G E+ + F
Sbjct: 321 LPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELF 380
Query: 363 REMEAEGVRPNHVTFVGLLSACA-----------HSGLVEKGRWCFVMMRHV-------- 403
+M AE + + L+S C HS ++ G V++ +
Sbjct: 381 NQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKC 440
Query: 404 -----------YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
++ E + + MI S+ G ++A M +V W A+LG
Sbjct: 441 GNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR-NVITWNAMLGAY 499
Query: 453 QMHGNVELGEKV 464
HG E G K+
Sbjct: 500 IQHGAEEDGLKM 511
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 279/514 (54%), Gaps = 17/514 (3%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
K++H QIIK+ N H + LL A G + A +F + R D + ++
Sbjct: 23 KKLHAQIIKA---GLNQHEPIPNTLL--NAYGKCGLIQDALQLFDALPRRDPVAWASLL- 76
Query: 105 ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR--LDGLVGASVYGQ 162
AC S N H + L + + +L TG PD F L+K C L G V+ +
Sbjct: 77 -TACNLS--NRPH--RALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHAR 131
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
DD V++S+I ++ G R +FD +S+ + +SW MI GY RSG A
Sbjct: 132 FFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEA 191
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
LFR+ RN+F+W ++I+G VQ G +A LF EM+ E + D + ++SV+ A
Sbjct: 192 FRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRH---EGISVTDPLVLSSVVGA 248
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
CA L + GK +HG + G + + I AL+DMY KC + A +F EM +KD ++W
Sbjct: 249 CANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSW 308
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
T++I A +G +EA + EM GV+PN VTFVGL+ AC+H+GLV KGR F M
Sbjct: 309 TSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVE 368
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
+ + P + HY C++D+ SR+G EAE LIR+MP+ PD W ALL C+ HGN ++
Sbjct: 369 DHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAV 428
Query: 463 KVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGV 522
++A +L++L P + + Y+ L ++YA AG ++DV K R LM +K PG S +++
Sbjct: 429 RIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKK-APGYSCIDLGKG 487
Query: 523 VHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFG 556
H F + +++E++ ++ L + M+ G+
Sbjct: 488 SHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYA 521
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 160/395 (40%), Gaps = 87/395 (22%)
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
R L+ ++ Q++K G+ + N++++ + CG + A LFD + RD V+W ++
Sbjct: 16 RQSPLLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASL 75
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
+ A +L R + S + + TGF
Sbjct: 76 L----------TACNLSNRPHRALSISRSLLSTGF------------------------- 100
Query: 270 KPDKITIASVLSACAYLGA--IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE-- 325
PD AS++ ACA LG + GK VH S D V+ ++L+DMY K G +
Sbjct: 101 HPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYG 160
Query: 326 -----------------------------RAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
A+ +F++ P ++ AWTA+IS +G G
Sbjct: 161 RAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGV 220
Query: 357 EAFDTFREMEAEGVR-PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV---EPHVYH 412
+AF F EM EG+ + + ++ ACA+ L E G+ M V + E ++
Sbjct: 221 DAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGK----QMHGVVITLGYESCLFI 276
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY----L 468
+ID+ ++ A+ + M DV W +++ G HG E E +A Y L
Sbjct: 277 SNALIDMYAKCSDLVAAKYIFCEM-CRKDVVSWTSIIVGTAQHGQAE--EALALYDEMVL 333
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+ P N +V L + AG V K R L +
Sbjct: 334 AGVKP-NEVTFVGLIHACSHAGL---VSKGRTLFR 364
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/438 (38%), Positives = 248/438 (56%), Gaps = 48/438 (10%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK---CLKLYKQMLCTG 132
++ G L A +F I D ++N MI A SG+ L +++M
Sbjct: 209 TLRGCLDDARRLFEEIPVRDAVSWNAMIAGYA---------QSGRFEEALAFFQEMKRAN 259
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
++P+ T +L C + +G V + G+ ++ + N++I ++ CG
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCG------ 313
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
DLD A DLF + +++I SWN +I G+ +E
Sbjct: 314 -------------------------DLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD-CDVVIG 311
AL LF++MQ S+VE P+ +T S+L ACAYLGA+D GKW+H Y+ + L + +
Sbjct: 349 ALALFRKMQQSNVE----PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLW 404
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
T+L+DMY KCG +E A VF M K +W AMIS A++G+ A + FR+M EG
Sbjct: 405 TSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFE 464
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ +TFVG+LSAC+H+GLVE GR CF M Y + P + HY CMID+L RAGLF EAE
Sbjct: 465 PDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEA 524
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
L+++M M+PD +WG+LLG C++HGNVELGE A++L +L+P N YV L ++YA AGR
Sbjct: 525 LMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGR 584
Query: 492 FDDVKKTRNLMKERGIRK 509
+DDV + R + ++G++K
Sbjct: 585 WDDVARIRTKLNDKGMKK 602
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 262/469 (55%), Gaps = 28/469 (5%)
Query: 15 SPAKVSPP-------NKESTKLILRN-----AIDECKNMRELKEIHTQIIKSPCLQTNDH 62
SP+ V PP + +L+N + CK+ + LK+IH+QIIK+ T
Sbjct: 7 SPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNT--- 63
Query: 63 HSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
+++L+ FCA+S G+LSYA +F I++ + + +N MIR N+ SS +
Sbjct: 64 QFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVG------AI 117
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
Y +ML G+ P+ TFPFLLK C K G ++G V+K G+ D FV S+I+++
Sbjct: 118 DFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMY 177
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
G + A ++F + S RD VS+ A+I GY G LD A LF + R+ SWN++I
Sbjct: 178 AQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIA 237
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
G+ Q GR EAL FQEM+ ++V P++ T+ +VLSACA G+++ G WV ++
Sbjct: 238 GYAQSGRFEEALAFFQEMKRANV----APNESTMVTVLSACAQSGSLELGNWVRSWIEDH 293
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA-LNGYGKEAFDT 361
GL ++ + AL+DMY KCG +++A +F+ + +KD ++W MI ++ +N Y KEA
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSY-KEALAL 352
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR+M+ V PN VTFV +L ACA+ G ++ G+W + +L + + +ID+ +
Sbjct: 353 FRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYA 412
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
+ G A+++ M + + W A++ G MHG+ + ++ + + D
Sbjct: 413 KCGNIEAAKQVFAGMKPK-SLGSWNAMISGLAMHGHANMALELFRQMRD 460
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 66/348 (18%)
Query: 61 DHHSLITRLLFFCAL----SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDT 116
+ H L + L AL S G L A ++F I D+ ++N+MI + +S
Sbjct: 291 EDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK--- 347
Query: 117 HSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQV-VKFGVCDDVFVQ 175
+ L L+++M + + P+ +TF +L C +G ++ + KF + +
Sbjct: 348 ---EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLW 404
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
S+I ++ CG + +A+ +F M + + SWNAMI G G ++AL+LFR+M+
Sbjct: 405 TSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMR----- 459
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
+E +PD IT VLSAC++ G ++ G+
Sbjct: 460 ------------------------------DEGFEPDDITFVGVLSACSHAGLVELGRQC 489
Query: 296 HGYLRRSGLDCDVVIGTA----LVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFA 350
+ D D+ ++D+ G+ G + A + K M K D W +++
Sbjct: 490 FSSMVE---DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACR 546
Query: 351 LNG---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
++G G+ A E+E E P + + A A GRW
Sbjct: 547 VHGNVELGEFAAKHLFELEPE--NPGAYVLLSNIYATA-------GRW 585
>gi|115482212|ref|NP_001064699.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|31432332|gb|AAP53975.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113639308|dbj|BAF26613.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|215694632|dbj|BAG89823.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768315|dbj|BAH00544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 493
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/421 (38%), Positives = 253/421 (60%), Gaps = 6/421 (1%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCD-DVFVQNSVISLFMACGFVTSARM 193
P LTFPFL + + + +V+ Q ++ G+ D+ V NS++ ++ AC AR
Sbjct: 60 PSHLTFPFLARAAARLATPRLARAVHAQPLRRGLLPHDLHVSNSLVHMYAACALPGLARR 119
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LFDE+ + VSWNA++ GY + DL A +F RM +R++ SW+++I G V+ G REA
Sbjct: 120 LFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHREA 179
Query: 254 LELFQEMQSSSV-EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
L +F+ M++++ + V+ + +T+ SVL ACA+LG + G+ +H YL G ++ + T
Sbjct: 180 LAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRLAT 239
Query: 313 ALVDMYGKCGCVERAYGVFKEMP--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
+LVDMY KCG + A VF+ +P D L W A+I A++G +E+ F++ME GV
Sbjct: 240 SLVDMYAKCGAIVEALEVFQAVPVENTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHAGV 299
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
P+ +T++ LLSAC H GLV++ W F + PHV HYAC++D+L RAG EA
Sbjct: 300 VPDEITYLSLLSACVHGGLVDEA-WSFFRSLEAQGLRPHVEHYACLVDVLGRAGRLEEAY 358
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
+++SMPM+P V V GALL C +HG VELGE V + L+ L P + Y+ L ++YA A
Sbjct: 359 GVVKSMPMKPSVSVLGALLNACHLHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAVAR 418
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
R+ + KK R +M+ERG++K VPG S ++V + F + E+ +L ++ M
Sbjct: 419 RWQEAKKARKVMEERGVKK-VPGFSEIDVGRGICRFIAQDKTHPGSAEIYALLKLIAMDM 477
Query: 551 K 551
K
Sbjct: 478 K 478
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 294/535 (54%), Gaps = 20/535 (3%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKS--PCLQTNDHHSLITRLLFFCALSV 77
SPP + A+ C + LK++H + + QT H LL F +L +
Sbjct: 225 SPPTADFVA-----ALHRCATLAHLKQLHAHAVVTGRAAAQTTTFH-----LLRFASLRL 274
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPD 136
S L YA +F +++ Y+ M+ A A SS + + H+ L L+ +ML G +P+
Sbjct: 275 S-CLPYARRLFDATPSPNVFLYSAMLSAYAAASSHSQE-HARDSLALFLRMLRRGRPAPN 332
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
+P +L+ LV S++ K G F++ S++ + G + AR LFD
Sbjct: 333 QFVYPLVLRAACAIGVQLV-RSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFD 391
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
+++R+VVSW A++ GY R+G + A+ LF RM +R++ +WN+II G Q G EA+ +
Sbjct: 392 GLTDRNVVSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGI 451
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F+ M V+E +P+ T++ +LSAC +LG + GK +HGY RS + + L+D
Sbjct: 452 FRRM----VDEGFRPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLID 507
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MYGKCG + A +F + W ++I+ AL+G + A F M EGV+P+ VT
Sbjct: 508 MYGKCGNLMEAKWIFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVT 567
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FVGLL+AC H G V++G F +M + +EP + HY C++D+L RAG F +A I M
Sbjct: 568 FVGLLNACTHGGFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDM 627
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
++PD +WG+LL C++H ++EL E + L+DL+P N + V L ++Y++ G +++V+
Sbjct: 628 KVQPDEVIWGSLLNACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVR 687
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
K R LMKE K++PGCS +EVD F E++ L+ L+ M+
Sbjct: 688 KVRKLMKEDVTGKKLPGCSWIEVDRKTRRFYSGDDGHPESEDIYDTLDKLATTME 742
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/351 (43%), Positives = 228/351 (64%), Gaps = 5/351 (1%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
N +I ++ G + SAR LFDEM R+V+SW +MI GY +GD+ A LF M ++N+
Sbjct: 203 NLLIDGYVKVGDMESARSLFDEMPERNVISWTSMIYGYCNNGDVLSARFLFDAMPEKNLV 262
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SWN++I G+ Q + EAL+LF+E+QSS+V E P+++T+ S+L A A LGA++ G+WV
Sbjct: 263 SWNAMIGGYCQNKQPHEALKLFRELQSSTVFE---PNEVTVVSILPAIATLGALELGEWV 319
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H +++R LD V + T+LVDMY KCG + +A VF E+PKK+T W A+I+ FA+NG
Sbjct: 320 HRFVQRKKLDAAVNVCTSLVDMYLKCGEISKARKVFSEIPKKETATWNALINGFAMNGLA 379
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
EA + F EM+ EG++PN +T G+LSAC+H GLVE+G+ F M L P + HY C
Sbjct: 380 SEALEAFSEMQQEGIKPNDITMTGVLSACSHGGLVEEGKGQFKAMIESGL-SPKIEHYGC 438
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
++D+L RAG EAE LI+SMP E + + + C +V ++V ++++P N
Sbjct: 439 LVDLLGRAGCLDEAENLIKSMPFEANGIILSSFSFACGFSNDVTRAQRVLNQAVNMEPGN 498
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ YV + ++YA R+ DVK+ LM+ RG +KEV G S++EVD V EF
Sbjct: 499 NGIYVMMRNLYAMEERWKDVKEINGLMRRRGAKKEV-GSSAIEVDSRVSEF 548
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 169/431 (39%), Gaps = 93/431 (21%)
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS---AR 192
+CL FLL+ C R L ++ +++ + +V N + CG ++S AR
Sbjct: 4 ECL---FLLQRCRTRKTLL---QIHALILRNAIDANV---NILTKFITTCGQLSSTRHAR 54
Query: 193 MLFDEMSNR-DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
LFD S+R D N+MI ++ L A L++ +++ F
Sbjct: 55 HLFDNRSHRGDTFLCNSMIKSHVVMRQLADAFTLYKDLRRETCFV--------------- 99
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
PD T + CA A+ G HG++ + G D+ +
Sbjct: 100 -------------------PDNFTFTVLAKCCALRMAVWEGLETHGHVVKIGFCFDMYVS 140
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
TALVDMY K G + A VF +MP + ++WTA+I + G A+ F+ M
Sbjct: 141 TALVDMYAKFGNLGLARKVFNDMPDRSLVSWTALIGGYVRRGDMGNAWFLFKLMPGR--- 197
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMM--RHVYLVEPHVYHYACMIDILSRAGLFS-- 427
+ F L+ G +E R F M R+V +Y Y D+LS LF
Sbjct: 198 -DSAAFNLLIDGYVKVGDMESARSLFDEMPERNVISWTSMIYGYCNNGDVLSARFLFDAM 256
Query: 428 ----------------------EAERLIR----SMPMEPDVFVWGALLGGCQMHGNVELG 461
EA +L R S EP+ ++L G +ELG
Sbjct: 257 PEKNLVSWNAMIGGYCQNKQPHEALKLFRELQSSTVFEPNEVTVVSILPAIATLGALELG 316
Query: 462 EKVAQYLIDLDPLNHAFYV--NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
E V ++ + L+ A V +L DMY K G + K R + E+P +
Sbjct: 317 EWVHRF-VQRKKLDAAVNVCTSLVDMYLKCGE---------ISKARKVFSEIPKKETATW 366
Query: 520 DGVVHEFSMKG 530
+ +++ F+M G
Sbjct: 367 NALINGFAMNG 377
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 244/377 (64%), Gaps = 5/377 (1%)
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
A+ LF ++S+R++V AMI GY R G ++ A +F +M+++++ W+++I+G+ + +
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
+EAL LF EMQ + KPD++TI SV+SACA LG +D KW+H Y+ ++GL + +
Sbjct: 62 QEALNLFSEMQVFGI----KPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPV 117
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
AL+DMY KCG + A GVF++M ++ ++WT+MI+ FA++G A F +M+ E +
Sbjct: 118 NNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENI 177
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
+PN VTFVG+L AC+H+GLVE+GR F M + + + P HY CM+D+ RA L +A
Sbjct: 178 KPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDAL 237
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
L+ +MP+ P+V +WG+L+ CQ+HG ELGE A+ +++L+P + V L ++YAK
Sbjct: 238 ELVETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDR 297
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
R+ DV + RNLMK+RGI KE GCS +E++ V+EF M +++ L+ + K +
Sbjct: 298 RWQDVGELRNLMKQRGISKE-RGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKEL 356
Query: 551 KNGGFGQYIRGLSMEAQ 567
K G+ R + ++ +
Sbjct: 357 KLVGYTPNTRSVLVDVE 373
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 134/314 (42%), Gaps = 47/314 (14%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
+L+ S G + A +F ++ DL ++ MI A E++ + L
Sbjct: 13 NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYA----ESDKPQ--EALN 66
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS-VYGQVVKFGVCDDVFVQNSVISLF 182
L+ +M GI PD +T ++ C RL L A ++ V K G+ + V N++I ++
Sbjct: 67 LFSEMQVFGIKPDQVTILSVISACA-RLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMY 125
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
CG + +AR +F++M +R+V+SW +MI + GD AL F +MK NI
Sbjct: 126 AKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENI-------- 177
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL-RR 301
KP+ +T VL AC++ G ++ G+ +
Sbjct: 178 ---------------------------KPNGVTFVGVLYACSHAGLVEEGRRTFASMTNE 210
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKEAFD 360
+ +VD++G+ + A + + MP + + W ++++ A +G+
Sbjct: 211 HNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMA--ACQIHGENELG 268
Query: 361 TFREMEAEGVRPNH 374
F + + P+H
Sbjct: 269 EFAAKQVLELEPDH 282
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 294/535 (54%), Gaps = 17/535 (3%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKS--PCLQTNDHHSLITRLLFFCALSV 77
+PP + A+ C + LK++H + + QT H LL F +L +
Sbjct: 4 APPFSSHGDFVA--ALHRCATLAHLKQLHAHAVVTGRAAAQTTTFH-----LLRFASLRL 56
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPD 136
S L YA +F +++ Y+ M+ A A SS + + H+ L L+ +ML G +P+
Sbjct: 57 S-CLPYARRLFDATPSPNVFLYSAMLSAYAAASSHSQE-HARDSLALFLRMLRRGRPAPN 114
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
+P +L+ LV S++ K G F++ S++ + G + AR LFD
Sbjct: 115 QFVYPLVLRAACAIGVQLV-RSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFD 173
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
+++R+VVSW A++ GY R+G + A+ LF RM +R++ +WN+II G Q G EA+ +
Sbjct: 174 GLTDRNVVSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGI 233
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F+ M V+E +P+ T++ +LSAC +LG + GK +HGY RS + + L+D
Sbjct: 234 FRRM----VDEGFRPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLID 289
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MYGKCG + A +F + W ++I+ AL+G + A F M EGV+P+ VT
Sbjct: 290 MYGKCGNLMEAKWIFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVT 349
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FVGLL+AC H G V++G F +M + +EP + HY C++D+L RAG F +A I M
Sbjct: 350 FVGLLNACTHGGFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDM 409
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
++PD +WG+LL C++H ++EL E + L+DL+P N + V L ++Y++ G +++V+
Sbjct: 410 KVQPDEVIWGSLLNACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVR 469
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
K R LMKE K++PGCS +EVD F E++ L+ L+ M+
Sbjct: 470 KVRKLMKEDVTGKKLPGCSWIEVDRKTRRFYSGDDGHPESEDIYDTLDKLATTME 524
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 279/477 (58%), Gaps = 11/477 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G ++YA NVF + D+ T+N MI C+ ++ KL+++M + + PD +
Sbjct: 160 GRINYARNVFDEMSHRDVVTWNTMIE-RYCRFGLVDEA-----FKLFEEMKDSNVMPDEM 213
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
++ C + + ++Y +++ V D + ++++++ G + AR F +M
Sbjct: 214 ILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
S R++ AM+ GY + G LD A +F + +K+++ W ++I+ +V+ +EAL +F+
Sbjct: 274 SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFE 333
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM S + KPD +++ SV+SACA LG +D KWVH + +GL+ ++ I AL++MY
Sbjct: 334 EMCCSGI----KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG ++ VF++MP+++ ++W++MI+ +++G +A F M+ E V PN VTFV
Sbjct: 390 AKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L C+HSGLVE+G+ F M Y + P + HY CM+D+ RA L EA +I SMP+
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV 509
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+V +WG+L+ C++HG +ELG+ A+ +++L+P + V + ++YA+ R++DV+
Sbjct: 510 ASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNI 569
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R +M+E+ + KE G S ++ +G HEF + E+ L+ + +K G+
Sbjct: 570 RRVMEEKNVFKE-KGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGY 625
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 213/439 (48%), Gaps = 18/439 (4%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
+ PP + + + CK++ +K++H I L+T +H L + L S S
Sbjct: 3 LPPPIASTAANTILEKLSFCKSLNHIKQLHAHI-----LRTVINHKLNSFLFNLSVSSSS 57
Query: 79 GSLSYATNVFSHIKRS-DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+LSYA NVFS I + +N +R + +SSE T + Y+++ G D
Sbjct: 58 INLSYALNVFSSIPSPPESIVFNPFLR-DLSRSSEPRAT-----ILFYQRIRHVGGRLDQ 111
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+F +LK +K G ++G K D FV+ + ++ +CG + AR +FDE
Sbjct: 112 FSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDE 171
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
MS+RDVV+WN MI Y R G +D A LF MK N+ I+ V +
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+ + +E V+ D + ++++ A G +D + + R+ + ++ + TA+V
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR---EFFRKMSVR-NLFVSTAMVSG 287
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG ++ A +F + KKD + WT MIS + + Y +EA F EM G++P+ V+
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
++SACA+ G+++K +W + HV +E + +I++ ++ G + MP
Sbjct: 348 FSVISACANLGILDKAKWVHSCI-HVNGLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Query: 438 MEPDVFVWGALLGGCQMHG 456
+V W +++ MHG
Sbjct: 407 RR-NVVSWSSMINALSMHG 424
>gi|414873430|tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/523 (35%), Positives = 281/523 (53%), Gaps = 33/523 (6%)
Query: 46 EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA 105
EIH + K L H L T LL A + G +A ++F + L + M RA
Sbjct: 32 EIHGLLFKEGLLHAGAH--LPTALL--SAYAALGRPRHARDLFDEMPDPGLVSRTAMARA 87
Query: 106 NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKEC--TKRLD--GLVGAS--- 158
+A + + L +++ M+ G+ PD + L C T L G+ A
Sbjct: 88 HAASG------QAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAAGMAAARRPG 141
Query: 159 --VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
V+ +V G+ DVFV +I ++ G + +R LFD M R VSWNAM+ Y+R
Sbjct: 142 KMVHAIIVTSGIVPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTVSWNAMVHQYIRH 201
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
++ A +LF M +R++ SWN++I G+ GR EALEL ++M S S V P+ T+
Sbjct: 202 SNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSCP-VYPNGPTM 260
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
++VL+ACA G ++ G WVH ++ R+ ++ D + +L+DMY KCG +E+A VF++ P+
Sbjct: 261 STVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVFEKAPE 320
Query: 337 -KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+D +WT MI A++G +A F M+ G+ P+ VT VG+L+ACAH GLV++G
Sbjct: 321 ARDLYSWTTMICGLAMHGRAADALKMFGMMQDNGIHPDDVTLVGVLNACAHCGLVDEG-- 378
Query: 396 CFVMMRHVYLVE-----PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
+RH Y +E P + HY C+ID+L R G EA +IR+M M+P+ +WGA L
Sbjct: 379 ----LRHFYSLEKYAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKPNAVIWGAFLN 434
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
C++H NVELGE A L LDP + V L +YAK ++ + + R M I+K
Sbjct: 435 ACKVHSNVELGEIAAAELTRLDPGDPWAKVMLSSLYAKLQDWNSLARERREMNNLQIKK- 493
Query: 511 VPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNG 553
PGCSS+E+DG VHEF G E+ +L + G
Sbjct: 494 TPGCSSIELDGEVHEFVAGGFQHPQHGEICTVLENVEAQTHTG 536
>gi|115477124|ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42407750|dbj|BAD08896.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624127|dbj|BAF24072.1| Os08g0500600 [Oryza sativa Japonica Group]
Length = 429
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 228/343 (66%), Gaps = 7/343 (2%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+V NS+++ F G + AR +FDEM R++VSWNAM+ GY + D+D A +LF M
Sbjct: 87 NVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMP 146
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
++++ SW +I+G+ Q GR ++ LELF+ MQ+ E V+P+++T+ SVLSACA L A++
Sbjct: 147 EKDVVSWTCMISGYAQAGRYQDTLELFRAMQT---ESNVQPNEVTMVSVLSACANLTALE 203
Query: 291 HGKWVHGYLRRSG--LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
G+WVH ++ + L+ + +G AL+DMY KCG + A +F + +K+ AW A+I+
Sbjct: 204 EGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITR 263
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
A+NG +++ D F +M+ G +PN +TFVG+L+AC+H GLV++GR CF M V+P
Sbjct: 264 LAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQP 323
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
V HY CM+D+L RAGL EAE LIRSMPM PDV V+GALLG C+MH ++ E+V +
Sbjct: 324 EVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKRFDVAERVQSEI 383
Query: 469 --IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
++L+ +V + D+YA AG++ DV + R +++ GIRK
Sbjct: 384 HSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGIRK 426
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 151/299 (50%), Gaps = 51/299 (17%)
Query: 166 FGVCD---DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
FG C DV N+VI ++ CG + SA+ +FDEM R+ VSW+ M+ GY +G+LDVA
Sbjct: 15 FGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVA 74
Query: 223 LDLFRRMKK--RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
++F RM RN+ +WNS++TGF + G A ++F EM + +++
Sbjct: 75 REMFDRMPAIGRNVVTWNSMVTGFARHGLLPLARKMFDEM--------------PVRNLV 120
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
S A L GY S +D A +F MP+KD +
Sbjct: 121 SWNAML---------RGYSVNSDMDG--------------------ARELFDVMPEKDVV 151
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+WT MIS +A G ++ + FR M+ E V+PN VT V +LSACA+ +E+GRW
Sbjct: 152 SWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAF 211
Query: 400 MRHVYLVEPHVYHY-ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+ +V + Y+ A +ID+ ++ G A ++ S+ +V W AL+ M+GN
Sbjct: 212 IDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLD-RKNVSAWNALITRLAMNGN 269
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
DVV ++ Y KCG +E A VF EMP+++ ++W+ M+ +A G A + F M
Sbjct: 23 DVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMP 82
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM------------------------RH 402
A G N VT+ +++ A GL+ R F M R
Sbjct: 83 AIG--RNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARE 140
Query: 403 VYLVEPH--VYHYACMIDILSRAGLFSEAERLIRSMPME----PDVFVWGALLGGCQMHG 456
++ V P V + CMI ++AG + + L R+M E P+ ++L C
Sbjct: 141 LFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLT 200
Query: 457 NVELGEKVAQYLIDLDP--LNHAFYVN--LCDMYAKAGRFDDVKKTRNLMKERGI 507
+E G V + ID LN+ + + L DMYAK GR D K N + + +
Sbjct: 201 ALEEGRWVHAF-IDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNV 254
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 240/412 (58%), Gaps = 28/412 (6%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DVF +++S ++ V AR LFD M R+ VSWNAM+ GY++ +++A +LF M
Sbjct: 275 DVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMP 334
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM----------------QSSSVEEMVKP--- 271
RN+ +WN++ITG+ Q G+ EA LF +M QS E ++
Sbjct: 335 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVL 394
Query: 272 --------DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
++ + +S LS CA + A++ GK +HG L + G + +G AL+ MY KCG
Sbjct: 395 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 454
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
+E A +FKEM KD ++W MI+ ++ +G+G+EA F M+ EG++P+ T V +LSA
Sbjct: 455 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSA 514
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+H+GLV+KGR F M Y V P+ HYACM+D+L RAGL EA L+++MP EPD
Sbjct: 515 CSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAA 574
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+WG LLG ++HGN EL E A + ++P N YV L ++YA +GR+ DV K R M+
Sbjct: 575 IWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMR 634
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++G++K VPG S +E+ H FS+ K+E+ L L MK G+
Sbjct: 635 DKGVKK-VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGY 685
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 39/306 (12%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
N++IS ++ G ARMLFDEM RD+VSWN MI GY+R+ +L A +LF RM +R++
Sbjct: 94 NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVC 153
Query: 236 SWNSIITGFVQGGRAREALELFQEM----------------QSSSVEE--MVKPDKITIA 277
SWN+I++G+ Q G +A +F M Q+S +EE ++ + A
Sbjct: 154 SWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWA 213
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDC----DVVIGTALVDMYGKCGCVERAYGVFKE 333
V C G + K V R D DVV ++ Y + G ++ A +F E
Sbjct: 214 LVSWNCLLGGFVKKKKIVEA---RQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE 270
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
P D WTAM+S + N +EA + F M N V++ +L+ VE
Sbjct: 271 SPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVE-- 324
Query: 394 RWCFVMMRHVYLVEP--HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
M + ++ V P +V + MI ++ G SEA+ L MP + D W A++ G
Sbjct: 325 -----MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 378
Query: 452 CQMHGN 457
G+
Sbjct: 379 YSQSGH 384
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 61/346 (17%)
Query: 55 PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETN 114
PC + +++IT + G +S A N+F + + D ++ MI + +
Sbjct: 334 PCRNVSTWNTMIT------GYAQCGKISEAKNLFDKMPKRDPVSWAAMI------AGYSQ 381
Query: 115 DTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV 174
HS + L+L+ M G + +F L C + +G ++G++VK G FV
Sbjct: 382 SGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFV 441
Query: 175 QNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
N+++ ++ CG + A LF EM+ +D+VSWN MI GY R G + AL F MK+
Sbjct: 442 GNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKR--- 498
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK- 293
E +KPD T+ +VLSAC++ G +D G+
Sbjct: 499 --------------------------------EGLKPDDATMVAVLSACSHTGLVDKGRQ 526
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALN 352
+ H + G+ + +VD+ G+ G +E A+ + K MP + D W ++ ++
Sbjct: 527 YFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVH 586
Query: 353 G---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
G + A D ME E N +V L + A S GRW
Sbjct: 587 GNTELAETAADKIFAMEPE----NSGMYVLLSNLYASS-----GRW 623
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 11/161 (6%)
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
L +SG D D+ + Y + G A VFK MP+ ++++ AMIS + NG + A
Sbjct: 51 LPKSG-DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELA 109
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F EM + V++ ++ + + K R F M E V + ++
Sbjct: 110 RMLFDEMPERDL----VSWNVMIKGYVRNRNLGKARELFERM-----PERDVCSWNTILS 160
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
++ G +A R+ MP + DV W ALL + +E
Sbjct: 161 GYAQNGCVDDARRVFDRMPEKNDV-SWNALLSAYVQNSKLE 200
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 281/470 (59%), Gaps = 11/470 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+GSL + F + ++ ++N MI A ++ +T + S L+ +M G D
Sbjct: 160 AGSLGDSRRFFDEMVDRNVVSWNSMIGGYA-QAGDTREVCS-----LFGEMRRQGFLEDE 213
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T LL C++ + +G V+ +++ G D+ ++++++ ++ CG + AR F+
Sbjct: 214 FTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEM 273
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M + VVSW +M+ + G ++ A F M +RNI SWN++I+ +VQ G+ EAL+L+
Sbjct: 274 MPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLY 333
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+MQS + PD+IT+ +VLSA +G + GK VH Y+R + + DV + +L+DM
Sbjct: 334 NQMQSQGL----APDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDM 389
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG V+ A +F EM ++ ++W +I A++G + FR M + P+ +TF
Sbjct: 390 YAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITF 449
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V LLSAC+H GL+E G+ F MRHVY V+ V HYACM+D+L R G +A LI+ MP
Sbjct: 450 VALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMP 509
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M+PDV VWGALLG C++HGNV++G +V + L++L+ ++ +V + ++ + +++D+K+
Sbjct: 510 MKPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMKR 569
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
R LMKE G RK++ G SS+E++ +HEF ++ E+ +++ LS
Sbjct: 570 LRKLMKEWGTRKDM-GVSSIEINNSIHEFGVEDIRHERSSEIYAVVDQLS 618
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 217/463 (46%), Gaps = 88/463 (19%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS--LSYATNVF 88
L+ + +C++++ L ++H ++ L L + +CAL+ +G L +A +F
Sbjct: 14 LQKLLRQCRSIQRLNQLHAHLLVHGSLSAASDLLLAS----YCALAKAGHGVLCHARRLF 69
Query: 89 SHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECT 148
I D YN +IRA C SS + L+L++ ML GI P+ T PF++K CT
Sbjct: 70 DGIPGPDRVMYNTIIRA-YCNSSCPREA-----LRLHRGMLRRGILPNEFTLPFVVKACT 123
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+V+G ++ G+ VFV N+++ + + G + +R FDEM +R+VVSWN+
Sbjct: 124 IAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNS 183
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
MI GY ++GD RE LF EM+ E
Sbjct: 184 MIGGYAQAGD-------------------------------TREVCSLFGEMRRQGFLE- 211
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG------ 322
D+ T+ S+L AC+ G ++ G+ VH + SG D+++ +ALVDMYGKCG
Sbjct: 212 ---DEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMAR 268
Query: 323 ------------------CVERAYGV-------FKEMPKKDTLAWTAMISVFALNGYGKE 357
C + +G F MP+++ ++W AMIS + G E
Sbjct: 269 RCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHE 328
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE----PHVYHY 413
A D + +M+++G+ P+ +T V +LSA G + G+ M H+Y+ + P V
Sbjct: 329 ALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGK-----MVHLYIRDNIYNPDVSLV 383
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
++D+ ++ G A L M +V W ++GG MHG
Sbjct: 384 NSLLDMYAKCGQVDTAISLFSEM-CNRNVVSWNVIIGGLAMHG 425
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
+N+II + REAL L + M + + P++ T+ V+ AC A +H VH
Sbjct: 80 YNTIIRAYCNSSCPREALRLHRGM----LRRGILPNEFTLPFVVKACTIAQAREHALAVH 135
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
G R GL V +G AL+ Y G + + F EM ++ ++W +MI +A G +
Sbjct: 136 GVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTR 195
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
E F EM +G + T V LL AC+ G +E GR M V + + +
Sbjct: 196 EVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRML-VSGSRVDLILESAL 254
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
+D+ + G A R MP++ V W ++L HG+V A+ D P +
Sbjct: 255 VDMYGKCGDLWMARRCFEMMPIK-SVVSWTSMLCAQTKHGSV----NAARCWFDHMPERN 309
Query: 477 AFYVN-LCDMYAKAGRFDDVKKTRNLMKERGI 507
N + Y + G+ + N M+ +G+
Sbjct: 310 IVSWNAMISCYVQRGQCHEALDLYNQMQSQGL 341
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/459 (36%), Positives = 266/459 (57%), Gaps = 18/459 (3%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACK------SSETNDTHSG---KCLKLYKQMLCT 131
LS+ T + ++K +DL + + K + + H G + +++++M+ +
Sbjct: 224 LSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMS 283
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKF--GVCDDVF--VQNSVISLFMACGF 187
I D TF ++ C +G ++ +K DV V N++I+ + CG
Sbjct: 284 KIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGK 343
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
V A+ +F++M RD+VSWN ++ GY+ +D A F M ++NI SW +I+G Q
Sbjct: 344 VDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQI 403
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
G A EAL+ F M+ E P A + +C+ LG++ HG+ +H + R G +
Sbjct: 404 GFAEEALKFFNRMKLQGFE----PCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESS 459
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+ G AL+ MY +CG V+ A+ +F MP D ++W AMI+ +G G +A + F EM
Sbjct: 460 LSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLK 519
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
EG+ P+ ++F+ ++SAC+H+GLV++GR F M +VY V P HYA +ID+L RAG FS
Sbjct: 520 EGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFS 579
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
EA+ ++ SMP EP +W ALL GC++HGN++LG + A+ L +L P + YV L +MYA
Sbjct: 580 EAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYA 639
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
AG+++D+ K R LM++RG++KE PGCS +EV+ VH F
Sbjct: 640 VAGQWNDMAKVRKLMRDRGVKKE-PGCSWIEVENKVHSF 677
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 209/480 (43%), Gaps = 83/480 (17%)
Query: 65 LITRLLFFCALSVSGSLSYATNVFSH--IKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
++ R A S +G L + +FS + D YN MI A S +D H+ +
Sbjct: 79 IVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITA----YSHNHDGHAA--I 132
Query: 123 KLYKQMLCTGISPDCLTFPFLL----------KECTKRLDGLVGASVYGQVVKFGVCDDV 172
+L+ M PD TF +L K C + ++ VVK G
Sbjct: 133 ELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQ---------LHCAVVKSGTGFVT 183
Query: 173 FVQNSVISLFMACG---------FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
V N++IS ++ C + AR LFDEM NRD +SW +I GY+++ DLD A
Sbjct: 184 SVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAK 243
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
+ K+ +WN++I+G+ G EA E+F++M S ++ D+ T SV+S C
Sbjct: 244 EFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQ----LDEFTFTSVISVC 299
Query: 284 AYLGAIDHGKWVHGYLRRS----GLDCDVVIGTALVDMYGKCG----------------- 322
A G GK +H Y ++ D + + AL+ Y KCG
Sbjct: 300 ANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDL 359
Query: 323 --------------CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
C++ A F EMP+K+ L+W MIS A G+ +EA F M+ +
Sbjct: 360 VSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQ 419
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHVYLVEPHVYHYACMIDILSRAGLFS 427
G P F G + +C+ G ++ GR ++R+ Y E + +I + +R G+
Sbjct: 420 GFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGY--ESSLSAGNALITMYARCGVVD 477
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLC 483
A L +MP D W A++ HG +EL E++ + I D ++ ++ C
Sbjct: 478 AAHCLFINMPC-VDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISAC 536
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 166/395 (42%), Gaps = 54/395 (13%)
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
V+ ++ G + N +I ++ + AR LFDE+ D+V+ +I Y +GD
Sbjct: 35 VHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGD 94
Query: 219 LDVALDLFRR--MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
L ++ +F + R+ +N++IT + A+ELF +MQ + +PD T
Sbjct: 95 LKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDN----FRPDNYTF 150
Query: 277 ASVLSACAYLGAID-HGKWVHGYLRRSGLDCDVVIGTALVDMYGKC---------GCVER 326
SVL A A + + H + +H + +SG + AL+ Y KC +
Sbjct: 151 TSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAE 210
Query: 327 AYGVFKEMPKKDTLAWT-------------------------------AMISVFALNGYG 355
A +F EMP +D L+WT AMIS +A G
Sbjct: 211 ARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLY 270
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHVYLVEPHVYHYA 414
EAF+ FR+M ++ + TF ++S CA++G G+ ++ V P V
Sbjct: 271 LEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPV 330
Query: 415 --CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
+I + G A+ + MP E D+ W +L G + NV ++ + ++
Sbjct: 331 NNALITFYWKCGKVDIAQEIFNKMP-ERDLVSWNIILSG---YVNVRCMDEAKSFFNEMP 386
Query: 473 PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
N ++ + A+ G ++ K N MK +G
Sbjct: 387 EKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGF 421
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 294/547 (53%), Gaps = 53/547 (9%)
Query: 16 PAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL 75
P ++ N ++ + + + +C ++ +LK+IH Q I++ N L +R+L +L
Sbjct: 13 PIEIKGENSKTHQSRFLHLLTDCTDLSKLKQIHAQAIRNFSTH-NSSLFLYSRILHVSSL 71
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-IS 134
YA VF+ I + + +N +I AC S + ++++ +ML G +
Sbjct: 72 I---DFDYACRVFNQIDNPNSFMWNTLI--GACARSLDRKEQA---IEIFYRMLEEGSVE 123
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
PD TFPFLLK C G + Q+ K G+ DV+V NS+I L+ +CG
Sbjct: 124 PDKHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGC------- 176
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
L +AL +F +M R++ SWN +I +VQ G AL
Sbjct: 177 ------------------------LSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENAL 212
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG---LDCDVVIG 311
+LF EMQ+S +PD T+ S++SACA +GA+ G W H Y+ R + DV+I
Sbjct: 213 KLFVEMQNS-----FEPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLIN 267
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF-REMEAEGV 370
++LVDMY KCG + A VF+ MPK D +W +MI A++G G+ A F R +E E
Sbjct: 268 SSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKF 327
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
PN VTFVG+LSAC H G+V GR F MM + Y +EP + HY C++D+LSR+G EA
Sbjct: 328 LPNSVTFVGVLSACNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEAL 387
Query: 431 RLIRSMPMEPDVFVWGALLGGC-QMHGNVELGEKVA-QYLIDLDPLNHAFYVNLCDMYAK 488
L+ +M ++PD +W +LL C + + VEL E+VA + L ++ YV L +YA
Sbjct: 388 ELVANMHIKPDAVIWRSLLDACYKQNAGVELSEEVAFKILQSEKTISSGVYVMLSRVYAS 447
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
A +++DV R +M + G+ KE PGCSS+E+DG+ HEF + +E+ +++ + +
Sbjct: 448 ARQWNDVGIIRKVMTDMGVTKE-PGCSSIEIDGISHEFFAGDTSHPRIKEIYGVIDLIEE 506
Query: 549 IMKNGGF 555
++ G+
Sbjct: 507 KLERRGY 513
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 228/376 (60%), Gaps = 4/376 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D+ N++I F CG + A LF+ M RDV+SW+ MI GY + GD+ VA LF M
Sbjct: 255 DLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMP 314
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+++ ++N+I+ G+ Q G EALE+F EMQ S + PD+ T+ LSA + LG ++
Sbjct: 315 DKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQS---NLSPDETTLVVALSAISQLGHVE 371
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
+H Y +G+ + AL+DMY KCG +E A +F + +K W AMIS A
Sbjct: 372 KAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMA 431
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
NG GK AF EM V+P+ +TF+G+L+ACAH+GLV++G CF +MR V+ +EP +
Sbjct: 432 RNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKL 491
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+DIL +AGL A + I MP+EP+ +W LL CQ H N +GE +A++L+
Sbjct: 492 QHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGELIAKHLMT 551
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
+D N + YV L ++YA+ G + K R +MK++ + K VPGCS +E++GVVHEF ++
Sbjct: 552 MDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTK-VPGCSWIELEGVVHEFLVRD 610
Query: 531 SPKVVKEELVLILNGL 546
E+ +L+G
Sbjct: 611 KSHPYVSEIYSVLDGF 626
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 226/454 (49%), Gaps = 50/454 (11%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P+ T L+LR+ C+ ++ ++H +IIK+ L+ + SL T+++ S L
Sbjct: 12 PSTPPTLLLLRH----CETQNDVNQVHARIIKTGYLKNS---SLTTKIILNSISSPHKPL 64
Query: 82 -SYATNVF------SHIKRS----DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
+A VF I+R+ D + +N +I+ S ++ + L L+ ML
Sbjct: 65 VEFARYVFFTRYAVQRIRRNHLDDDPFLWNAVIK------SYSHGNEPVRALVLFCMMLE 118
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
G D +F +LK C + G ++G ++K + ++F+ N +I++++ CG +
Sbjct: 119 NGFCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEF 178
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM--KKRNIFSWNSIITGFVQGG 248
AR +FD M +D VS+N+MI GY++SG +D+A +LF M + +N+ SWNS++ GF Q
Sbjct: 179 ARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTK 238
Query: 249 RARE-ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
ALELF E+M + D ++ +++ A G I+ + H R D
Sbjct: 239 DGIGLALELF--------EKMPERDLVSWNTIIGGFAKCGRIE---FAHSLFNRMP-KRD 286
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
V+ + ++D Y K G ++ A +F EMP KD +A+ +++ +A NGY EA + F EM+
Sbjct: 287 VISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQR 346
Query: 368 E-GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA----CMIDILSR 422
+ + P+ T V LSA + G VEK H Y +E + +ID+ S+
Sbjct: 347 QSNLSPDETTLVVALSAISQLGHVEKAA-----SMHNYFLENGISVTGKVAVALIDMYSK 401
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
G A LI + + W A++ G +G
Sbjct: 402 CGSIENA-ILIFDGVDQKGIDHWNAMISGMARNG 434
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 141/357 (39%), Gaps = 81/357 (22%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDC 137
G + A +F + D+ +N ++ A + + + L+++ +M + +SPD
Sbjct: 301 GDIKVARTLFDEMPDKDVVAFNTIMAGYA------QNGYYTEALEIFHEMQRQSNLSPDE 354
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T L ++ AS++ ++ G+ V ++I ++ CG + +A ++FD
Sbjct: 355 TTLVVALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDG 414
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ + + WNAMI G R+G +A + M + +
Sbjct: 415 VDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHRLS------------------------ 450
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR-SGLDCDVVIGTALVD 316
VKPD IT VL+ACA+ G + G +R+ L+ + +VD
Sbjct: 451 -----------VKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVD 499
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
+ GK G VE A +EMP + PN +
Sbjct: 500 ILGKAGLVEGALKFIEEMP----------------------------------IEPNDII 525
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP-HVYHYACMIDILSRAGLFSEAERL 432
+ LLSAC + G ++ +H+ ++ + Y + +I +R GL+S A ++
Sbjct: 526 WRTLLSACQNHENFTIGE---LIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKV 579
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 251/398 (63%), Gaps = 5/398 (1%)
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+ PD + +L C + G +++ ++ D V ++++++ +C + A
Sbjct: 6 VVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAE 65
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
L++ +S +++V M+ GY ++G +++A +F M +++ SW+++I G+ + + E
Sbjct: 66 KLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPME 125
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
AL LF +MQ S V KPD+IT+ SV+SACA +GA++ + +H ++ + + IG
Sbjct: 126 ALNLFHDMQRSGV----KPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGN 181
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
AL+DM+ KCG + A VF MP+K+ + WT++I+ A++G G+ A F M++EG++P
Sbjct: 182 ALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQP 241
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
N VTF+GLL AC H+GLVE+GR F +M Y +EP HY CM+D+L RA L +A L
Sbjct: 242 NGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADL 301
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
I+SM + P+V +WG+LL C+MHG++ELG A+ +++LDP + V L ++YA+ G +
Sbjct: 302 IQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNW 361
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
+DVK+ R +M+ +G K+ GCS +E++G VH+F++ G
Sbjct: 362 NDVKEVRGVMEVQGTWKK-KGCSWMELNGSVHQFAVGG 398
>gi|357142899|ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 497
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/409 (38%), Positives = 234/409 (57%), Gaps = 38/409 (9%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS---- 190
PD L+ F L CT+ + + ++ V+ G DV++ N+ +S + V S
Sbjct: 74 PDHLSISFSLHSCTRLPCHPIASLLHSFAVRLGHAGDVYIVNAAVSAYFTAADVASAERL 133
Query: 191 -----------------------------ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
AR FD M R+VVSWNAM+ Y +G L
Sbjct: 134 FSDTSKDVADVVTWTTMVAGHARAGDVERARWFFDAMPERNVVSWNAMLGAYASAGMLSE 193
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
A LF M RN +W+S++TG VQ EAL +F +M V V P++ + SV+S
Sbjct: 194 ARKLFDGMHSRNAATWSSMVTGLVQSDHCEEALRVFSDM----VARGVVPNESILVSVIS 249
Query: 282 ACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
ACA L +++HG WVH Y++R V++ TA+VDMYGKCGC+ A VF MP ++
Sbjct: 250 ACAQLRSLEHGVWVHAYVKRELHGSMSVILATAIVDMYGKCGCIHNAIRVFAAMPVRNIY 309
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+W +MI+ A+NG +A F +M+ GV+PN +TF+GLL AC+HSGLV++GRW F M
Sbjct: 310 SWNSMITGLAMNGREMQALSLFWKMQMAGVQPNDITFIGLLGACSHSGLVDEGRWLFNRM 369
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+ + ++P HY M+D+L RAGL EA +++MP+EP +WGAL G C +HG VEL
Sbjct: 370 VNDFGIQPVPEHYGLMVDLLGRAGLVKEAVDFVKNMPVEPHPGLWGALAGACNIHGEVEL 429
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
GE++A+ LI+L+P + + Y+ L ++Y + R++D+ R L+KER + K
Sbjct: 430 GEEIAKKLIELEPRHGSRYILLSNIYGTSSRWEDMATVRRLIKERKVSK 478
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 159/396 (40%), Positives = 242/396 (61%), Gaps = 13/396 (3%)
Query: 139 TFPFLLKECTKRLDG-------LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
+F FLL + LD +G+ V+ VK G D++V+N++ + CG V +
Sbjct: 125 SFTFLLASISNHLDATDHRASSFLGSHVHALAVKAGAAGDLYVRNALTHFYGVCGDVGAM 184
Query: 192 RMLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
R +FDE+ RDVV+WNA++ GY+R+G + A ++F M R+ SW++++ G+V+ G
Sbjct: 185 RTVFDELPRVRDVVTWNAVLAGYVRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGEL 244
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
AL +F++M VE+ V+ ++ + + LSA A +G ++HG++VH ++R+G+ V +
Sbjct: 245 DVALGVFRDM----VEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNV 300
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
G ALVDM+ KCGCV A VF MP++D AW AMI A +G G++A + F EG+
Sbjct: 301 GAALVDMFSKCGCVAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGL 360
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
P +TFVG+L+AC+ GLV +GR F +M Y +EP + HY CM+D+L RAGL SEA
Sbjct: 361 WPTDITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAI 420
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
LI M + PD +WG +L C+ H V+LG V LI+L+P + YV L +YAKA
Sbjct: 421 ELIEGMHIAPDPVLWGTVLSACKTHNLVDLGITVGNKLIELEPAHDGHYVLLASIYAKAK 480
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++D+V++ R LM RG K G S +E G +H+F
Sbjct: 481 KWDEVREVRKLMSSRGTGKSA-GWSLMEAQGNLHKF 515
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/587 (30%), Positives = 307/587 (52%), Gaps = 58/587 (9%)
Query: 13 LNSPAKVSPPNKESTKLILRNAIDECK---NMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
+N P + P + +LR +D C+ ++R L+ H +++ L ++ + +
Sbjct: 1 MNPPRSLFPELPPAGHALLR-LVDSCRAPAHLRSLRAAHARLLFLLRLPSHPASAAVRVK 59
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
L + + + + + R+ ++ +N+++R S + L L+ M
Sbjct: 60 LIQAYAACAALPAARAVLDASPDRTTVF-FNVLLRGLTAASLHRD------ALLLFASMR 112
Query: 130 CTGIS--PDCLTFPFLLKECTKRLDGLV-GASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
G + PD T+P LK C DGLV G ++ + G+ +VFV +S IS++ CG
Sbjct: 113 PQGHACFPDHYTYPLALKSCAA-TDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCG 171
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRR------------------ 228
A +F+EM RDVVSWNAMI G+ +G A+D+FR
Sbjct: 172 RPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASIL 231
Query: 229 --------------------MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
M+ + + SWN+++ + EA+ELF MQ +E
Sbjct: 232 PSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIE-- 289
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
PD +T+A+VL +C + A+ GK +H ++R + +++ AL+DMY CGC++ A
Sbjct: 290 --PDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEAR 347
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF M +D ++WT++IS + +G+G+EA D F +M +G+ P+ + FV +L+AC+H+G
Sbjct: 348 DVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAG 407
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
L++ G+ F M + + P + HYACM+D+L RAG EA I MP++P+ VWGAL
Sbjct: 408 LLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGAL 467
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
LG C++H N+++G A L+ L P +YV L ++YA+AGR+ DV R++M+ +GI+
Sbjct: 468 LGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIK 527
Query: 509 KEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K +PG S+ E+ VH F + + + + L+ L + ++ G+
Sbjct: 528 K-LPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGY 573
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/470 (35%), Positives = 272/470 (57%), Gaps = 12/470 (2%)
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLTFPFLLK 145
+F + D+ ++N MI A + D C +LY++ML TG+ P+ +T +L+
Sbjct: 196 LFDRMHDRDIVSWNSMI-AGYSQGGFYED-----CKELYRKMLDSTGLRPNGVTVVSVLQ 249
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
C + D + G V+ +++ V DV NS+I L+ CG + AR LF+EMSN+D V+
Sbjct: 250 ACAQTNDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVT 309
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
+ +++ GY+ G +D A+DLFR MK + +WN++I+G VQ LEL QEMQ
Sbjct: 310 YGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQ---- 365
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
E +P+ +T++S+L + + GK +H Y R+G ++ + T+++D Y K G +
Sbjct: 366 EFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLR 425
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
A VF + + + WTA+IS ++ +G A F +M + G +P+ VTF +L+ACA
Sbjct: 426 GAQWVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACA 485
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
HSG+V + F M Y +P V HYACM+ +LSRAG+ SEA I MP+EP+ VW
Sbjct: 486 HSGMVNEAWKIFDEMFLKYGFQPCVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVW 545
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
GALL G + G+VELG+ V +L +++P N YV + ++Y++AGR+++ + R MK+
Sbjct: 546 GALLNGVSVSGDVELGKFVCDHLFNMEPENTGNYVIMANLYSQAGRWEEAENIREKMKKI 605
Query: 506 GIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G++K +PG S +E G + F + EE+ +L GL +M+ G+
Sbjct: 606 GLKK-IPGTSWIETSGGLRSFIARDVSSERSEEIYGMLEGLLGLMREEGY 654
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 197/457 (43%), Gaps = 77/457 (16%)
Query: 35 IDECKN---MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHI 91
I C + +R+ K++H +I+ S N L ++L+ F S S L A VF I
Sbjct: 41 IQHCSDHRLLRQAKQLHARIVLSSLTPDN---FLASKLITF--YSKSNHLYEAHKVFDKI 95
Query: 92 KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRL 151
+++++N M+ S H+ L + PD T +LK +
Sbjct: 96 LDKNIFSWNAMLIG---YSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLF 152
Query: 152 -DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
D ++ V V++ G D+FV N++I+ + C AR+LFD M +RD+VSWN+MI
Sbjct: 153 PDSILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMI 212
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
GY QGG + EL+++M S+ ++
Sbjct: 213 AGY-------------------------------SQGGFYEDCKELYRKMLDST---GLR 238
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
P+ +T+ SVL ACA + G VH ++ ++ DV +L+ +Y KCG ++ A +
Sbjct: 239 PNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYAREL 298
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F EM KD + + +++S + +G+ +A D FREM+ + + GL+ + G++
Sbjct: 299 FNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGIL 358
Query: 391 EKGRW---------------------CFVMMR-----HVYLVEP----HVYHYACMIDIL 420
E + CF ++ H Y + ++Y +ID
Sbjct: 359 ELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAY 418
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
++ G F + + + + VW A++ HG+
Sbjct: 419 AKLG-FLRGAQWVFDQSKDRSLIVWTAIISAYSAHGD 454
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 112/274 (40%), Gaps = 41/274 (14%)
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
D ++ C+ + K +H + S L D + + L+ Y K + A+ VF
Sbjct: 33 DYGAFGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVF 92
Query: 332 KEMPKKDTLAWTAMI---SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA--- 385
++ K+ +W AM+ S+ ++ + + + ++P++ T +L A +
Sbjct: 93 DKILDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLF 152
Query: 386 HSGLVEKGRWCFVMMRH-----VYLVEPHVYHYA------------------------CM 416
++ K CFV +RH +++V + +Y+ M
Sbjct: 153 PDSILAKEVQCFV-LRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSM 211
Query: 417 IDILSRAGLFSEAERLIRSM----PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
I S+ G + + + L R M + P+ ++L C ++ G KV Q++I+
Sbjct: 212 IAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERK 271
Query: 473 -PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
++ + + +L +YAK G D ++ N M +
Sbjct: 272 VEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNK 305
>gi|224126363|ref|XP_002329535.1| predicted protein [Populus trichocarpa]
gi|222870244|gb|EEF07375.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 184/564 (32%), Positives = 285/564 (50%), Gaps = 70/564 (12%)
Query: 6 QMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSL 65
Q ++ ++ NS + P + IL+ C N+++ +IHTQ+ Q S
Sbjct: 39 QQITQTISNSS---NAPTLDLNHPILQKLEQSCTNIKQFNQIHTQLTVLGLFQHPFAASR 95
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
+ L C SVS +S +++HI+ D + N ++R+ ND G Y
Sbjct: 96 YIKKLCACLNSVSHCVS----LYNHIEEPDAFMCNTIMRSFV----NVNDPF-GALRFYY 146
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
++M+ + P+ TFP + K C G V+ VVKFG D+FV+NS I + C
Sbjct: 147 EKMIAKWVLPNHYTFPLVAKVCADIGSLREGQKVHALVVKFGFELDLFVRNSFIRFYSVC 206
Query: 186 GFVTSARM-------------------------------LFDEMSNRDVVSWNAMIIGYL 214
G + ARM +FDEM RD+ +WN+MI GY+
Sbjct: 207 GRTSDARMVFDNGFVLDLVSWNSMIDGYVKNGELGLAREIFDEMYERDIFTWNSMISGYV 266
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV--------- 265
GD++ A LF +M R++ SWN +I GF + A + F EM +V
Sbjct: 267 GVGDMEAARGLFDKMPSRDVVSWNCMIDGFARIKDVSMAAKFFDEMPLRNVVSWNVMLAL 326
Query: 266 --------------EEMVK----PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
+ MV PD+ ++ SVL+ACA L +D GKWVH Y++ +G+ D
Sbjct: 327 YLRCKKYSDCLRFFDMMVGGDFVPDEASLVSVLTACAELKMLDQGKWVHSYMKDNGIKPD 386
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+++ TAL+ MY KCG ++ A VF +MP+K ++W +MI + ++G+G +A + FREME
Sbjct: 387 MLLSTALLTMYAKCGAMDLAREVFDKMPEKSVVSWNSMIIGYGIHGHGDKALEMFREMEK 446
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
G PN TF+ +LSAC+HSG+V G W F +M Y ++P HY C++D+L +AGL
Sbjct: 447 GGPMPNDATFMSVLSACSHSGMVWNGWWYFDLMHRKYRIQPKPEHYGCLVDLLGQAGLKE 506
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
+E L R E + +WG LL C+ H E GE +A+ LI L P + Y+ L + Y
Sbjct: 507 PSEDLTRKTHTEVEPTLWGDLLSACRAHCISEPGEILAKQLIKLFPNHVVPYLLLSNTYV 566
Query: 488 KAGRFDDVKKTRNLMKERGIRKEV 511
GR+DDV+ R +K + + ++
Sbjct: 567 AEGRWDDVENLRMTLKNKTLNSKM 590
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 153/448 (34%), Positives = 268/448 (59%), Gaps = 11/448 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G ++YA NVF + + D+ T+N MI C+ ++ KL+++M + + PD +
Sbjct: 163 GRINYARNVFDEMSQRDVVTWNTMIE-RYCRFGLLDEA-----FKLFEEMKDSNVMPDEM 216
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
++ C + + ++Y +++ V D + ++++++ G + A F +M
Sbjct: 217 ILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKM 276
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
S R++ AM+ GY ++G LD A +F + + +++ W ++I+ + + +EAL +F+
Sbjct: 277 SVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFE 336
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM S + KPD +T+ SV+SAC LG +D KWVH Y +GL+ + I AL++MY
Sbjct: 337 EMCCSGI----KPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMY 392
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG ++ A VF++MP ++ ++W++MI+ FA++G ++ F +M+ E V PN VTFV
Sbjct: 393 AKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFV 452
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L C+HSGLVE+G+ F M Y + P + HY CM+D+ RA L EA +I SMPM
Sbjct: 453 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPM 512
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
P+V +WG+L+ C++HG +ELGE A+ ++ L+P + V + ++YA+ R+D V+
Sbjct: 513 APNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRII 572
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R +M+++ + KE G S ++++G HEF
Sbjct: 573 RWIMEKKKVFKE-KGLSRIDLNGKSHEF 599
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 217/443 (48%), Gaps = 26/443 (5%)
Query: 21 PPNKESTKLILRNAIDE----CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS 76
PP + S + N I E CK++ +K++H I L+T +H L + L S
Sbjct: 4 PPPRPSFAVSAANTILEKLSFCKSLNHIKQLHAHI-----LRTVINHKLNSFLFNLSFSS 58
Query: 77 VSGSLSYATNVFSHIKR-SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S +LSYA N+FS I + +N ++R + +S E T + Y+++ G
Sbjct: 59 SSINLSYALNLFSSISPLPESIVFNSLLR-DLSRSGEPRAT-----ILFYQRIRHVGGRF 112
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D ++FP +LK +K G ++G K D FV+ ++ ++ ACG + AR +F
Sbjct: 113 DRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVF 172
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
DEMS RDVV+WN MI Y R G LD A LF MK N+ I+ V +
Sbjct: 173 DEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 232
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
+ + +E V+ D + ++++ A G +D + R+ + ++ + TA+V
Sbjct: 233 YNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAM---EFFRKMSVR-NLFVSTAMV 288
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
Y K G ++ A +F + KD + WT MIS +A + + +EA F EM G++P+ V
Sbjct: 289 SGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVV 348
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYL--VEPHVYHYACMIDILSRAGLFSEAERLI 433
T + ++SAC + G ++K +W + R+ +L +E + +I++ ++ G A +
Sbjct: 349 TMLSVISACVNLGTLDKAKW---VHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVF 405
Query: 434 RSMPMEPDVFVWGALLGGCQMHG 456
MP +V W +++ MHG
Sbjct: 406 EKMPTR-NVVSWSSMINAFAMHG 427
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 272/477 (57%), Gaps = 39/477 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GSL VF + DL ++N +I+A E N+ + + L+++M + I PDCL
Sbjct: 296 GSLKDCQKVFDRMYVRDLISWNSIIKA-----YELNE-QPLRAILLFQEMRLSRIQPDCL 349
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T L AS+ Q+ + C V GF +
Sbjct: 350 TLISL-------------ASILSQLGEIRACRSV------------QGFTLRKGWFLE-- 382
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D+ NA+++ Y + G +D A +F + +++ SWN+II+G+ Q G A EA+E++
Sbjct: 383 ---DITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M+ E + ++ T SVL AC+ GA+ G +HG L ++GL DV +GT+L DMY
Sbjct: 440 IMEEEGGE--ISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMY 497
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
GKCG ++ A +F ++P+ +++ W +I+ +G+G++A F+EM EGV+P+H+TFV
Sbjct: 498 GKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 557
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
LLSAC+HSGLV++G WCF MM+ Y + P + HY CM+D+ RAG A I+SMP+
Sbjct: 558 TLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPL 617
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+PD +WGALL C++HGNV+LG+ +++L +++P + ++V L +MYA AG+++ V +
Sbjct: 618 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 677
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R++ +G+RK PG SS+EVD V F + EE+ L L + +K G+
Sbjct: 678 RSITSGKGLRK-TPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGY 733
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 216/501 (43%), Gaps = 103/501 (20%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C N++ K +H +++ S +Q + + L +C L G+++ A F HI D+Y
Sbjct: 64 CTNLQSAKCLHARLVVSNAIQNVCISAKLVNL--YCYL---GNVALARYTFDHIHNRDVY 118
Query: 98 TYNIMIRA--NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
+N+MI A SSE +C L+ ML +G+ PD TFP +LK C DG
Sbjct: 119 AWNLMISGYGRAGYSSEVI-----RCFSLF--MLSSGLQPDYRTFPSVLKACRNVTDG-- 169
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
++ +KFG DV+V S+I L+ G V +AR+LFDE
Sbjct: 170 -NKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDE------------------ 210
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
M R++ SWN++I+G+ Q G A+EAL L S + M D +T
Sbjct: 211 -------------MPTRDMGSWNAMISGYCQSGNAKEALTL-----SDGLRAM---DSVT 249
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ S+LSAC G + G +H Y + GL+ ++ + L+D+Y + G ++ VF M
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMY 309
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS---------AC-- 384
+D ++W ++I + LN A F+EM ++P+ +T + L S AC
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRS 369
Query: 385 -------------------------AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
A GLV+ R F +L V + +I
Sbjct: 370 VQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF-----NWLPNKDVISWNTIISG 424
Query: 420 LSRAGLFSEAERLIRSMPME-----PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
++ G SEA + M E + W ++L C G + G K+ L+
Sbjct: 425 YAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 484
Query: 475 NHAFY-VNLCDMYAKAGRFDD 494
F +L DMY K GR DD
Sbjct: 485 LDVFVGTSLADMYGKCGRLDD 505
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 113/268 (42%), Gaps = 10/268 (3%)
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
Y + K +H L S +V I LV++Y G V A F + +D AW
Sbjct: 63 YCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNL 122
Query: 345 MISVFALNGYGKEAFDTFRE-MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV 403
MIS + GY E F M + G++P++ TF +L AC + + + + + ++
Sbjct: 123 MISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN--VTDGNKIHCLALKFG 180
Query: 404 YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEK 463
++ + VY A +I + R G A L MP D+ W A++ G GN +
Sbjct: 181 FMWD--VYVAASLIHLYCRYGAVVNARILFDEMPTR-DMGSWNAMISGYCQSGNAKEALT 237
Query: 464 VAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVV 523
++ L +D + V+L +AG F+ + + G+ E+ S+ +D
Sbjct: 238 LSDGLRAMDSVT---VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF-VSNKLIDLYA 293
Query: 524 HEFSMKGSPKVVKEELVLILNGLSKIMK 551
S+K KV V L + I+K
Sbjct: 294 EFGSLKDCQKVFDRMYVRDLISWNSIIK 321
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 284/515 (55%), Gaps = 45/515 (8%)
Query: 44 LKEIHTQIIKSPCLQTND-HHSLITRLLFFCALS-VSGSLSYATNVFSHIKRSDLYTYNI 101
L++IH ++++ ++ +D H +RL ALS + ++Y+ VFS L N
Sbjct: 27 LRQIHAVLLRTSLIRNSDVFHHFFSRL----ALSLIPRDINYSCRVFSQRLNPTLSHCNT 82
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
MIRA + + + + ++ + +P L+ F LK C K D L G ++G
Sbjct: 83 MIRAFSLSQTPC---EGFRLFRALRRNISFPANP--LSSSFALKCCIKSGDLLGGLQIHG 137
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
++ G D + +++ L+ C T A +FDE+ RD VS
Sbjct: 138 KIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVS---------------- 181
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
WN +I+ +++ R R+ L LF +M++ V+ VKPD +T L
Sbjct: 182 ---------------WNVLISCYLRNKRTRDVLVLFDKMKND-VDRCVKPDNVTCLLALQ 225
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
ACA LGA+D GK VH ++ +GL + + LV MY +CG +++AY VF M +++ ++
Sbjct: 226 ACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYEVFNRMRERNVVS 285
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
WTAMIS A+NG+GKEA + F EM G+ P T GLLSAC+HSGLV++G F MR
Sbjct: 286 WTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVDEGMMFFDRMR 345
Query: 402 H-VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+ ++P+++HY C++D+L RA L +A LI+SM M+PD +W LLG C++HGNVEL
Sbjct: 346 SGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGNVEL 405
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
GE+V +LI+ YV L + Y+ G+++ V + R+LMK++ I+ PGCS++E+
Sbjct: 406 GERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEKVTELRSLMKKKRIQTN-PGCSAIELQ 464
Query: 521 GVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G VHEF + KEE+ +L +++ +K G+
Sbjct: 465 GTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGY 499
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 258/469 (55%), Gaps = 44/469 (9%)
Query: 60 NDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG 119
+ H +++ + G + A +F I D+ ++N MI A ET
Sbjct: 125 SSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYA----ETGCYK-- 178
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L+L+++M+ + PD T+ +L C +G V+ V G ++ + N++I
Sbjct: 179 EALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALI 238
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
L+ CG +++ A LF+ + +++ SWN+
Sbjct: 239 DLYSKCG-------------------------------EVETACGLFQGLSYKDVISWNT 267
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I G+ +EAL LFQEM S P+ +T+ SVL ACA+LGAID G+W+H Y+
Sbjct: 268 LIGGYTHMNLYKEALLLFQEMLRSGE----TPNDVTMLSVLPACAHLGAIDIGRWIHVYI 323
Query: 300 --RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
R G+ + T+L+DMY KCG +E A+ VF M K +W AMI FA++G
Sbjct: 324 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADA 383
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
+FD F M G+ P+ +TFVGLLSAC+HSG+++ GR F M Y + P + HY CMI
Sbjct: 384 SFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMI 443
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L +GLF EAE +I +M MEPD +W +LL C+MHGNVEL E AQ LI ++P N +
Sbjct: 444 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPS 503
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
Y+ L ++YA AGR++DV + R L+ + ++K VPGCSS+EVD VV EF
Sbjct: 504 SYILLSNIYASAGRWEDVARIRALLNGKCMKK-VPGCSSIEVDSVVFEF 551
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 214/380 (56%), Gaps = 12/380 (3%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
L YAT+VF I+ + +N MIR +A S + L LY M+ G+ P+ TF
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSS------LTLYVCMVSLGLLPNSYTF 67
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
PFLLK C K G ++GQV+K G D++V S+IS+++ + A +FD S+
Sbjct: 68 PFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSH 127
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
RDVVS+ A+I GY GD+ A LF + +++ SWN++I+G+ + G +EALELF+EM
Sbjct: 128 RDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEM 187
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
+ V+PD+ T +VLSACA+ G+I+ G+ VH ++ G D ++ I AL+D+Y K
Sbjct: 188 MKMN----VRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSK 243
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG VE A G+F+ + KD ++W +I + KEA F+EM G PN VT + +
Sbjct: 244 CGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSV 303
Query: 381 LSACAHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
L ACAH G ++ GRW V + + + V +ID+ ++ G A ++ SM +
Sbjct: 304 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LH 362
Query: 440 PDVFVWGALLGGCQMHGNVE 459
+ W A++ G MHG +
Sbjct: 363 KSLSSWNAMIFGFAMHGRAD 382
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 184/514 (35%), Positives = 280/514 (54%), Gaps = 50/514 (9%)
Query: 44 LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMI 103
L++ H KSP H +++ + G + A +F I D+ ++N MI
Sbjct: 185 LEDAHKVFDKSP------HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMI 238
Query: 104 RANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQV 163
A ET + + L+L+K M+ T + PD T ++ C + +G V+ +
Sbjct: 239 SGYA----ETGNY--KEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 164 VKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
G ++ + N++I L+ CG +L+ A
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCG-------------------------------ELETAC 321
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
LF R+ +++ SWN++I G+ +EAL LFQEM S P+ +T+ S+L AC
Sbjct: 322 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE----TPNDVTMLSILPAC 377
Query: 284 AYLGAIDHGKWVHGYL--RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
A+LGAID G+W+H Y+ R G+ + T+L+DMY KCG +E A+ VF + K +
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS 437
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
W AMI FA++G +FD F M G++P+ +TFVGLLSAC+HSG+++ GR F M
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
Y + P + HY CMID+L +GLF EAE +I M MEPD +W +LL C+MHGNVELG
Sbjct: 498 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELG 557
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
E A+ LI ++P N YV L ++YA AGR+++V KTR L+ ++G++K VPGCSS+E+D
Sbjct: 558 ESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK-VPGCSSIEIDS 616
Query: 522 VVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
VVHEF + E+ +L + +++ GF
Sbjct: 617 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGF 650
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 246/453 (54%), Gaps = 16/453 (3%)
Query: 9 SYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITR 68
SY P+ PP + + CK ++ L+ IH Q+IK TN +++
Sbjct: 14 SYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTN---YALSK 70
Query: 69 LLFFCALSVS-GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQ 127
L+ FC LS L YA +VF I+ +L +N M R +A S + LKLY
Sbjct: 71 LIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVS------ALKLYVC 124
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
M+ G+ P+ TFPF+LK C K G ++G V+K G D++V S+IS+++ G
Sbjct: 125 MISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR 184
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+ A +FD+ +RDVVS+ A+I GY G ++ A LF + +++ SWN++I+G+ +
Sbjct: 185 LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET 244
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
G +EALELF++M ++ V+PD+ T+ +V+SACA G+I+ G+ VH ++ G +
Sbjct: 245 GNYKEALELFKDMMKTN----VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+ I AL+D+Y KCG +E A G+F+ +P KD ++W +I + KEA F+EM
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLF 426
G PN VT + +L ACAH G ++ GRW V + + + V +ID+ ++ G
Sbjct: 361 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 420
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
A ++ S+ + + W A++ G MHG +
Sbjct: 421 EAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRAD 452
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 184/533 (34%), Positives = 272/533 (51%), Gaps = 52/533 (9%)
Query: 26 STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL--LFFCALSVSGSLSY 83
+T L + NA K + K IH+ I + D HS ++ + G L
Sbjct: 331 TTYLSILNACSTSKALEAGKLIHSHI-------SEDGHSSDVQIGNALISMYARCGDLPK 383
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A +F + + DL ++N +I A + G+ ++LYKQM G+ P +TF L
Sbjct: 384 ARELFYTMPKRDLISWNAIIAGYARREDR------GEAMRLYKQMQSEGVKPGRVTFLHL 437
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
L C G ++ +++ G+ + + N++++++ CG + A+
Sbjct: 438 LSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ----------- 486
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
++F + R++ SWNS+I G Q G A +LFQEMQ+
Sbjct: 487 --------------------NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNE 526
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
+E PD IT ASVLS C A++ GK +HG + SGL DV +G AL++MY +CG
Sbjct: 527 ELE----PDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGS 582
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP-NHVTFVGLLS 382
++ A VF + +D ++WTAMI A G +A + F +M+ EG RP + TF +LS
Sbjct: 583 LQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILS 642
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
AC H+GLV +G F M Y V P + HY C++ +L RA F EAE LI MP PD
Sbjct: 643 ACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDA 702
Query: 443 FVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
VW LLG C++HGN+ L E A + L+ N A Y+ L ++YA AGR+DDV K R +M
Sbjct: 703 AVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVM 762
Query: 503 KERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ RGIRKE PG S +EVD ++HEF E+ L LS M+ G+
Sbjct: 763 EGRGIRKE-PGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGY 814
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 209/437 (47%), Gaps = 52/437 (11%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
K+IH+QIIK+ + + + + C G L A VF+ I D+ +YN M+
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKC-----GDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 105 ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVV 164
A K+ + +CL L+ QM GISPD +T+ LL T G ++ V
Sbjct: 203 LYAQKA------YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTV 256
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
+ G+ D+ V +++++ + C GD+D A
Sbjct: 257 EEGLNSDIRVGTALVTMCVRC-------------------------------GDVDSAKQ 285
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
F+ + R++ +N++I Q G EA E + M+S V ++ T S+L+AC+
Sbjct: 286 AFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV----ALNRTTYLSILNACS 341
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
A++ GK +H ++ G DV IG AL+ MY +CG + +A +F MPK+D ++W A
Sbjct: 342 TSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNA 401
Query: 345 MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHV 403
+I+ +A EA +++M++EGV+P VTF+ LLSACA+S G+ ++R
Sbjct: 402 IIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSG 461
Query: 404 YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEK 463
H+ + ++++ R G EA+ + DV W +++ G HG+ E K
Sbjct: 462 IKSNGHLAN--ALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYK 518
Query: 464 VAQYLI--DLDPLNHAF 478
+ Q + +L+P N F
Sbjct: 519 LFQEMQNEELEPDNITF 535
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 201/438 (45%), Gaps = 59/438 (13%)
Query: 21 PPNKESTKLILRNAIDECKNMR---ELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV 77
P E+ + + C R E K IH Q++++ +L+ + C
Sbjct: 20 PRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCR--- 76
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
S+ A VF + R D+ ++N +I A + + K +L+++M G P+
Sbjct: 77 --SVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKK------KAFQLFEEMQNAGFIPNK 128
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T+ +L C + G ++ Q++K G D VQNS++S++ CG + AR +F
Sbjct: 129 ITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAG 188
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+S RDVVS+N M+ Y Q +E L LF
Sbjct: 189 ISPRDVVSYNTMLGLY-------------------------------AQKAYVKECLGLF 217
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+M S E + PDK+T ++L A +D GK +H GL+ D+ +GTALV M
Sbjct: 218 GQMSS----EGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTM 273
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
+CG V+ A FK + +D + + A+I+ A +G+ EAF+ + M ++GV N T+
Sbjct: 274 CVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTY 333
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVE----PHVYHYACMIDILSRAGLFSEAERLI 433
+ +L+AC+ S +E G+ + H ++ E V +I + +R G +A L
Sbjct: 334 LSILNACSTSKALEAGK-----LIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELF 388
Query: 434 RSMPMEPDVFVWGALLGG 451
+MP D+ W A++ G
Sbjct: 389 YTMPKR-DLISWNAIIAG 405
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 142/310 (45%), Gaps = 30/310 (9%)
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
+ D+ T ++L C + K +H + +G+ D+ + L++MY KC V A+
Sbjct: 23 TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VFKEMP++D ++W ++IS +A G+ K+AF F EM+ G PN +T++ +L+AC
Sbjct: 83 QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 389 LVEKGRWCFV-MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
+E G+ +++ Y +P V + ++ + + G A ++ + DV +
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGISPR-DVVSYNT 199
Query: 448 LLGGCQMHGNVE----LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+LG V+ L +++ I D + Y+NL D + D+ K+ L
Sbjct: 200 MLGLYAQKAYVKECLGLFGQMSSEGISPDKVT---YINLLDAFTTPSMLDEGKRIHKLTV 256
Query: 504 ERGIRKEVPGCSSV--------EVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG- 554
E G+ ++ +++ +VD F K + + V++ N L + G
Sbjct: 257 EEGLNSDIRVGTALVTMCVRCGDVDSAKQAF------KGIADRDVVVYNALIAALAQHGH 310
Query: 555 ----FGQYIR 560
F QY R
Sbjct: 311 NVEAFEQYYR 320
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 233/373 (62%), Gaps = 6/373 (1%)
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G V+ VV+ GV V ++N+++ +F CG V SA+ +FD M +DV SW +M+ Y
Sbjct: 251 LGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYA 310
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+ GDL+ A LF+ + RN SW+ ++ + Q EA+ +F +M ++ VE P
Sbjct: 311 KCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVE----PIDA 366
Query: 275 TIASVLSACAYLGAIDHGKWVH-GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
T+ SVLSACA LG +D G+ ++ Y+ ++ V + A +DM+ KCG V A +F+
Sbjct: 367 TLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRN 426
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M K+ ++W MI AL+G +EA F++ +A G+ P+ +T++G+LSAC+HSGLV +G
Sbjct: 427 MEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEG 486
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R+ F M+ VY +EP HYACMID+L + GL EA + RSMP+ D WGALL C+
Sbjct: 487 RYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACR 546
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
MHGNVE+G+ A L+ LDP + YV + +YA ++ VK R +M++RG++K PG
Sbjct: 547 MHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKKN-PG 605
Query: 514 CSSVEVDGVVHEF 526
CSS+EVDG HEF
Sbjct: 606 CSSIEVDGKFHEF 618
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 188/433 (43%), Gaps = 80/433 (18%)
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRS-DLYTYNIMIRA--NACKSSETNDTHS 118
H +RLL FCALS L++A V + + Y M+R A K +
Sbjct: 62 HRFPASRLLAFCALSDPPRLAHAAAVLAQCAEGPNAYMLATMMRGFLRAGKPAHA----- 116
Query: 119 GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNS 177
L L++++L + D T F +K T +++ K G + V V N+
Sbjct: 117 ---LALFRRVLRDRLPADARTIVFAVKAATTSSSP--AEAIHCVAFKRGFIGQSVLVGNA 171
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
++ ++ + + AR LFDEM++RDVVSW ++ GY R G D A +F RM
Sbjct: 172 LVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRM-------- 223
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
++ G GG P+++T+ + SA +G + G+ VH
Sbjct: 224 --VVAG---GGW---------------------PNEVTLVAAASAAGQIGLLGLGRMVHQ 257
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA----LNG 353
+ SG+ V + ALVDM+GKCGCV A +F MP KD +WT+M+S +A L
Sbjct: 258 CVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLEN 317
Query: 354 YGK---------------------------EAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
GK EA F +M A GV P T V +LSACA
Sbjct: 318 AGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQ 377
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
G ++ GR + + VE V ID+ ++ G A RL R+M + +V W
Sbjct: 378 LGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNME-DKNVVSWN 436
Query: 447 ALLGGCQMHGNVE 459
++ +HG E
Sbjct: 437 TMIVAHALHGQSE 449
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 288/524 (54%), Gaps = 52/524 (9%)
Query: 4 KLQMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHH 63
++ +V+YS L + + P++ + L+L+ A + +N + + I+K D
Sbjct: 86 QMVLVAYSRLRNHGVI--PDRHTFPLLLK-AFSKLRNENPF-QFYAHIVKFGL----DFD 137
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
+ + L A + G + + +F + D+ ++ +I N C + + + L+
Sbjct: 138 AFVQNSLV-SAFAHCGYVDCSRRLFIETAKKDVVSWTALI--NGC----LRNGRAVEALE 190
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVISLF 182
+ +M +G+ D +T +L D G V+G V+ G V DV+V ++++ ++
Sbjct: 191 CFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMY 250
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
CG+ D A+ +F M RN+ SW ++I
Sbjct: 251 SKCGYC-------------------------------DDAVKVFNEMPTRNLVSWGALIA 279
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
G+VQ R +EAL++FQEM + E ++P++ T+ S L+ACA LG++D G+W+H Y+ RS
Sbjct: 280 GYVQCNRYKEALKVFQEM----IIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRS 335
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
L + +GTALVDMY KCGCV+ A VF+++P KD WTAMI+ A+ G + + F
Sbjct: 336 KLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLF 395
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
+M V+PN VTF+G+LSACAH GLV++G F +M Y +EP+V HY CM+D+L R
Sbjct: 396 SQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGR 455
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNL 482
AG EA + I SMPMEP VWGAL GC +H ELGE + +LI L P + Y+ L
Sbjct: 456 AGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILL 515
Query: 483 CDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++Y++ +++ R LMK +G+ K PGCS +EV+GV+HEF
Sbjct: 516 ANLYSRCQKWEAAANVRRLMKGKGVDKS-PGCSWIEVNGVIHEF 558
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 18/303 (5%)
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG--DLDVALDLFRRMKK 231
+++S++ F CG + + + + LRS DL L LF R+
Sbjct: 7 LRHSILCCFHKCGTFDHLKQTTSILITSGLAHHTFFLSDILRSATKDLGYTLLLFDRLAT 66
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
IF WN+II GF + + L + +++ V PD+ T +L A + L +
Sbjct: 67 PYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHG----VIPDRHTFPLLLKAFSKLRNENP 122
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
++ + ++ + GLD D + +LV + CG V+ + +F E KKD ++WTA+I+
Sbjct: 123 FQF-YAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLR 181
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP--- 408
NG EA + F EM + GV + VT V +L A A V GRW H + VE
Sbjct: 182 NGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWV-----HGFYVESGRV 236
Query: 409 --HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
VY + ++D+ S+ G +A ++ MP ++ WGAL+ G + KV Q
Sbjct: 237 IWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR-NLVSWGALIAGYVQCNRYKEALKVFQ 295
Query: 467 YLI 469
+I
Sbjct: 296 EMI 298
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 265/479 (55%), Gaps = 17/479 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG---KCLKLYKQMLCTGISP 135
G L A VF ++ D ++N +I T H G L L+ QM + +
Sbjct: 327 GCLDLAKRVFKSLREHDHISWNSLI---------TGVVHFGLGEDALILFNQMRRSSVVL 377
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D P +L C+ G ++G +K G+ V N++I+++ CG A ++F
Sbjct: 378 DEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVF 437
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
M R+ +SW AMI + RSGD+ A F M +RNI +WNS+++ +VQ G + E L+
Sbjct: 438 RLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLK 497
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
L+ M+S+ V+ PD IT + + ACA L + G V + + GL +V + ++V
Sbjct: 498 LYVSMRSNGVQ----PDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIV 553
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
MY +CG ++ A F + KD ++W AM++ FA NG G + DTF +M +PNH+
Sbjct: 554 TMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHI 613
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
++V +LS C+H GLV +G+ F M V+ + P H++CM+D+L RAGL +A+ LI
Sbjct: 614 SYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEG 673
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP +P+ VW ALLG C++H ++ L E A+ L++LD YV L +MY+++G D+V
Sbjct: 674 MPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNV 733
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
R LMK +GIR GCS +EVD VH F++ + +E+ L L + K++++ G
Sbjct: 734 ADMRKLMKVKGIRTS-RGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTG 791
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 207/464 (44%), Gaps = 29/464 (6%)
Query: 57 LQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH--IKRSDLYTYNIMIRANACKSSETN 114
Q H ++ T AL S +S A +F ++ D ++ MI + N
Sbjct: 66 FQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYS-----QN 120
Query: 115 DTHSGKCLKLYKQMLCT----GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCD 170
HS + + + M+ G + D +F ++K C D + ++ V K G
Sbjct: 121 GFHS-RSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGM 179
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+ +QNSV+ +++ CG V A +F ++ + WN+MI GY + AL +F RM
Sbjct: 180 ETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMP 239
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+R+ SWN++I+ F Q G + L +F EM + P+ +T SVLSACA +
Sbjct: 240 ERDEVSWNTLISIFSQHGFGVQCLAMFVEM----CNQGFSPNFMTYGSVLSACASTSDLK 295
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G +H + R D+V G L+DMY KCGC++ A VFK + + D ++W ++I+
Sbjct: 296 WGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVV 355
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
G G++A F +M V + +L C+ G + H Y ++ +
Sbjct: 356 HFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGE-----LLHGYTIKSGM 410
Query: 411 YHYA----CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
A +I + ++ G +A+ + R MP+ + W A++ G++ K
Sbjct: 411 GSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITAFSRSGDI---GKARG 466
Query: 467 YLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
Y + N + ++ Y + G ++ K M+ G++ +
Sbjct: 467 YFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPD 510
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 156/341 (45%), Gaps = 38/341 (11%)
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+ ++ Q++ G+ +F+ N+++ ++ CG A +F E +R++ +WN MI +
Sbjct: 26 IARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALV 85
Query: 215 RSGDLDVALDLFRRMKKR--NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
S + A LF M R + SW ++I+G+ Q G + E F M + + D
Sbjct: 86 SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA----- 327
+ SV+ AC LG +H + + G + I ++V MY KCG V+ A
Sbjct: 146 PFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFF 205
Query: 328 --------------YG------------VFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
YG +F MP++D ++W +IS+F+ +G+G +
Sbjct: 206 DIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAM 265
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F EM +G PN +T+ +LSACA + ++ G + + V+ +ID+ +
Sbjct: 266 FVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNG-LIDMYA 324
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
+ G A+R+ +S+ E D W +L+ G G LGE
Sbjct: 325 KCGCLDLAKRVFKSLR-EHDHISWNSLITGVVHFG---LGE 361
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 38/144 (26%)
Query: 283 CAYLGAIDH-GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK--------- 332
C++ H + +H L SGLD + + L+ MY CG A+ VF+
Sbjct: 17 CSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFT 76
Query: 333 ----------------------EMP--KKDTLAWTAMISVFALNGYGKEAFDTF----RE 364
EMP KD+++WT MIS ++ NG+ +F+TF R+
Sbjct: 77 WNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRD 136
Query: 365 MEAEGVRPNHVTFVGLLSACAHSG 388
G + +F ++ AC G
Sbjct: 137 TNDGGKNYDPFSFTSVMKACGSLG 160
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 260/445 (58%), Gaps = 15/445 (3%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S +G + A VF I DL T+ +I + N+ L +Y+ M+ G P
Sbjct: 275 SKAGFVDSARVVFERIPNKDLVTWGTIIDGYV-RVERINEA-----LMMYRSMISAGWEP 328
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGV-CDDVFVQNSVISLFMACGFVTSARML 194
+ + L+ C + + G + VVK G C D F+Q+++I L+ ACG + A +
Sbjct: 329 NDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYD-FIQSTIIHLYAACGRINEACLQ 387
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F S +V SWNA+I GY+R+ +D A++LF M +R++FSW+++I+G+ Q + AL
Sbjct: 388 FRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLAL 447
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
ELF +M +S + KP+++T+ SVLSA A G + G+W H Y+ + + + A+
Sbjct: 448 ELFHKMVASGI----KPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAI 503
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLA--WTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
+DMY KCG + A VF E+ +K + W A+I A++G+ + F ++E ++
Sbjct: 504 IDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKL 563
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
N +TF+G+L+AC H GLVE G+ F+ M+ + ++P + HY CM+D+L RAG EAE +
Sbjct: 564 NAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEM 623
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
IRSMPM+ DV +WG LL C+ HGNV++GE+ A+ L L+P + A V L +MYA AG++
Sbjct: 624 IRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKW 683
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSV 517
+D R M+ +++ +PG S V
Sbjct: 684 EDAFLVRRAMQSHRMQR-LPGYSGV 707
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 232/518 (44%), Gaps = 81/518 (15%)
Query: 11 SLLNSPAKVSPPNKESTKLILRNAIDECKN---MRELKEIHTQIIKSPCLQTNDHHSLIT 67
SLLN N E L+L +A+ C + + + K+IH + KS N + +
Sbjct: 52 SLLNPKTGQRHFNYE---LVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLI 108
Query: 68 RLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA-------------------NAC 108
+ C L V A ++F RSD +YN+MI C
Sbjct: 109 NMYGKCGLLVD-----AKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGC 163
Query: 109 KSSET------NDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
S T + + ++L+KQM G+ P+ +T L+ + ++G
Sbjct: 164 VSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGL 223
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
V+K + V V +++ ++ C + AR LFDEM +++VSWN M+ GY ++G +D A
Sbjct: 224 VIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSA 283
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
+F R+ +++ +W +II G+V+ R EAL +++ M S+ E P+ + + ++S
Sbjct: 284 RVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWE----PNDVMMVDLISG 339
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG-------------------- 322
C A+ G+ + + + G DC I + ++ +Y CG
Sbjct: 340 CGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASW 399
Query: 323 -----------CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
++RA +F EMP++D +W+ MIS + N A + F +M A G++
Sbjct: 400 NALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIK 459
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY----HYACMIDILSRAGLFS 427
PN VT V +LSA A SG +++GRW H Y+ + A +ID+ ++ G +
Sbjct: 460 PNEVTMVSVLSAIATSGTLKEGRWA-----HEYVHNNSITVSDNLSAAIIDMYAKCGSIN 514
Query: 428 EA-ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
A E V W A++ G +HG+ L K+
Sbjct: 515 NALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKI 552
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 187/534 (35%), Positives = 288/534 (53%), Gaps = 62/534 (11%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHS----LITRLLFFCALSVSGSLSYATNVFSH 90
++ C + +LK++H Q I++ T+ HH L +R+L F +L L YA VF
Sbjct: 33 LNSCTCISQLKQLHAQTIRT----TSSHHPNTFFLYSRILHFSSLH---DLRYAFRVFHQ 85
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTK 149
I+ + + +N +IRA C S H+ + LY +ML G + D TFPF+LK C
Sbjct: 86 IENPNSFMWNALIRA--CARSTDRKQHA---IALYHRMLEQGSVMQDKHTFPFVLKACAY 140
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
G ++ Q++K G DV++ NS++ + C
Sbjct: 141 LFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCD----------------------- 177
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
LD A +F RM +R++ SWN +I FV+ G AL LF EMQ +
Sbjct: 178 --------RLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQ-----KFF 224
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD----VVIGTALVDMYGKCGCVE 325
+PD TI S+ +ACA +G++ G W H +L + D D V++ T+LVDMY KCG +E
Sbjct: 225 EPDGYTIQSIANACAGMGSLSLGMWAHVFLLKK-FDADRVNDVLLNTSLVDMYCKCGSLE 283
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSAC 384
A +F MPK+D +W +MI F+ +G A + F M E + PN +TFVG+LSAC
Sbjct: 284 LALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSAC 343
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
H GLV +GR F +M Y ++P + HY C++D+L+RAGL EA ++ +MPM PD+ +
Sbjct: 344 NHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVI 403
Query: 445 WGALLGG-CQMHGNVELGEKVAQYLIDLD-PLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
W +LL C+ + VEL E++A+ +++ + + YV L +YA A R++DV R LM
Sbjct: 404 WRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLM 463
Query: 503 KERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFG 556
++G+ KE PGCSS+E+DGV HEF + EE+ L+ + + ++ G+
Sbjct: 464 TDKGVVKE-PGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYS 516
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 180/518 (34%), Positives = 280/518 (54%), Gaps = 59/518 (11%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + + + +++E+++ I KS +H +I++++ F +LS GSL YA +F
Sbjct: 9 LLSKLQQLSSVKEVEQTQCLITKSGLF---NHPFVISKIISFLSLSPLGSLVYAQAIFED 65
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
+ + N MIRA A K + LY M I D +PF LK C +
Sbjct: 66 TTMDNPFVCNTMIRAYA------KSVFPIKAIYLYNFMHRKDIKSDHFMYPFGLKACARV 119
Query: 151 L---DGLV----------GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
L +G + GA ++ ++ + G+ D F+QNS++ L+ CGF+ AR +FDE
Sbjct: 120 LWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARRVFDE 179
Query: 198 MSNR-------------------------------DVVSWNAMIIGYLRSGDLDVALDLF 226
M+ + +VVSWN +I Y+R G ++ A +F
Sbjct: 180 MTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKAVF 239
Query: 227 RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYL 286
+ M +R+ SWNS+I G+VQ AL LF+EM+ ++VE IT+ SVL ACA
Sbjct: 240 QEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVE----ATDITLISVLGACAET 295
Query: 287 GAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
GA++ G+ +H L++ + + ALVDMY KCG + A+ VF E+ K W AMI
Sbjct: 296 GALEIGRKIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMI 355
Query: 347 SVFALNGYGKEAFDTFR--EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
A++GY +EA F EM +G RPN VTF+G+L AC+H GLV++GR F M + Y
Sbjct: 356 VSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVDEGRKFFNRMVNEY 415
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
+ P + HY CM+D+LSR GL EA +I++MP E + +W LLG C++H +V+L E+
Sbjct: 416 KIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEES 475
Query: 465 AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
Q L ++PL YV L ++YA+A R++DV++ ++
Sbjct: 476 FQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVERASKIL 513
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 301/572 (52%), Gaps = 87/572 (15%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL-SVSGSLS 82
K+ K IL + ++ C+++ EL ++H +IKS ++ + ++RL+ FC + +LS
Sbjct: 3 KKHYKPIL-SQLENCRSLVELNQLHGLMIKSSVIR---NVIPLSRLIDFCTTCPETMNLS 58
Query: 83 YATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPF 142
YA +VF I +Y +N MIR +N + K L Y++ML G SPD TFP+
Sbjct: 59 YARSVFESIDCPSVYIWNSMIRG------YSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 112
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
+LK C+ D G+ V+G VVK G +++V ++ ++M CG V +F+++ +
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN 172
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT-------------------G 243
VV+W ++I G++ + A++ FR M+ + + +I+ G
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 244 FVQG----------------------------GRAREALELFQEM--------------- 260
F+QG G R A LF M
Sbjct: 233 FLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGY 292
Query: 261 -QSSSVEEM-----------VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
Q+ EE + PDK+T SV+ A G G+ +H Y+ ++G D
Sbjct: 293 SQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDA 352
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
I ALV+MY K G E A F+++ KKDT+AWT +I A +G+G EA F+ M+ +
Sbjct: 353 AIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEK 412
Query: 369 G-VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
G P+ +T++G+L AC+H GLVE+G+ F MR ++ +EP V HY CM+DILSRAG F
Sbjct: 413 GNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFE 472
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
EAERL+++MP++P+V +WGALL GC +H N+EL +++ + + + L YV L ++YA
Sbjct: 473 EAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYA 532
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
KAGR+ DVK R MK + + K V G SSVE
Sbjct: 533 KAGRWADVKLIRESMKSKRVDK-VLGHSSVET 563
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/432 (38%), Positives = 256/432 (59%), Gaps = 13/432 (3%)
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDG--LVGASVYGQVVKFGVC-DDVFVQNSVI 179
K + M G+ P +TF LL C G +G ++G K G+ + V V +++
Sbjct: 32 KEFADMRLAGVEPTHITFIALLSGCGDFPSGSETLGDLLHGYACKLGLDRNHVMVGTAIL 91
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
++ G V AR++FD M +++ V+WN MI GY+RSG + A+ LF +M + ++ SW +
Sbjct: 92 GMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMRSGQVHNAVKLFDKMPEPDLISWTA 151
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
++ GFV+ G EAL F+EMQ S V KPD + I + L+AC LGA+ G WVH Y+
Sbjct: 152 MVNGFVKKGFHEEALVWFREMQISGV----KPDYVAIIAALNACTNLGALSLGLWVHRYV 207
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
+V + +L+D+Y +CGCVE A VF +M K+ ++W ++I FA NG E+
Sbjct: 208 MSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESL 267
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
FR+M+ EG +PN VTF G L+AC+H GLV++G F M+ Y + P + HY C++D+
Sbjct: 268 VYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGLRFFQSMKRDYNISPRIEHYGCLVDL 327
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG-NVELGEKVAQYLIDLDPLNHAF 478
SRAG +A ++++SMPM+P+ V G+LL C+ HG N L E++ ++L DL+ +H+
Sbjct: 328 YSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRNHGNNTVLAERLMKHLSDLNVKSHSN 387
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKV---- 534
YV L +MYA +++ + R MK G++K+ PG SS+E+D H F S V
Sbjct: 388 YVILSNMYAADAKWEGASRMRRKMKGLGLKKQ-PGFSSIEIDDCTHVFMAGDSAHVETAY 446
Query: 535 VKEELVLILNGL 546
++E L LI + L
Sbjct: 447 IREVLELISSDL 458
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 91/260 (35%), Gaps = 80/260 (30%)
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC--------------- 384
++WT+ I++ + EA F +M GV P H+TF+ LLS C
Sbjct: 12 VSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGSETLGDLLH 71
Query: 385 -----------------------AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
+ G V+K R F Y+ + + + MID
Sbjct: 72 GYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVF-----DYMDDKNSVTWNTMIDGYM 126
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGG------------------------------ 451
R+G A +L MP EPD+ W A++ G
Sbjct: 127 RSGQVHNAVKLFDKMP-EPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAII 185
Query: 452 -----CQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRNLMKER 505
C G + LG V +Y++ D N+ N L D+Y + G + ++ + M++R
Sbjct: 186 AALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKR 245
Query: 506 GIRKEVPGCSSVEVDGVVHE 525
+ +G HE
Sbjct: 246 TVVSWNSVIVGFAANGNAHE 265
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 284/534 (53%), Gaps = 48/534 (8%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
PNK T +IL NA + +EIH++++K + + + + C GS+
Sbjct: 444 PNK-ITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARC-----GSI 497
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A +F+ + R D+ ++ MI A + L +++ M G+ P+ +T+
Sbjct: 498 KDARLLFNKMVRKDIISWTAMIGGLA------KSGLGAEALAVFQDMQQAGLKPNRVTYT 551
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
+L C+ G ++ QV++ G+ D V N++++++ CG V AR +FD
Sbjct: 552 SILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFD----- 606
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
RM +R+I ++N++I G+ +EAL+LF +Q
Sbjct: 607 --------------------------RMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQ 640
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
EE +KPDK+T ++L+ACA G+++ K +H + + G D +G ALV Y KC
Sbjct: 641 ----EEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKC 696
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G A VF +M K++ ++W A+I A +G G++ F M+ EG++P+ VTFV LL
Sbjct: 697 GSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLL 756
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
SAC+H+GL+E+GR F M + + P + HY CM+D+L RAG E E LI++MP + +
Sbjct: 757 SACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQAN 816
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
+WGALLG C++HGNV + E+ A+ + LDP N A YV L MYA AG +D K R L
Sbjct: 817 TRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKL 876
Query: 502 MKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
M++RG+ KE PG S +EV +H F + E++ L+ L+ MK G+
Sbjct: 877 MEQRGVTKE-PGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGY 929
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 228/482 (47%), Gaps = 64/482 (13%)
Query: 35 IDECKNMREL---KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHI 91
+ CK+ L +EIH + +K+ L + + I + C GS+ A VF +
Sbjct: 251 LSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKC-----GSIHEAREVFDKM 305
Query: 92 KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRL 151
+ + ++ I+I A + HS +++++M G+ P+ +T+ +L +
Sbjct: 306 ETKSVVSWTIIIGGYA------DCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPA 359
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
G +V+ ++ G D+ V +++ ++ CG R +F+++ NRD
Sbjct: 360 ALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRD--------- 410
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
+ +WN++I G +GG EA E++ +MQ E + P
Sbjct: 411 ----------------------LIAWNTMIGGLAEGGNWEEASEIYHQMQ----REGMMP 444
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
+KIT +L+AC A+ G+ +H + + G D+ + AL+ MY +CG ++ A +F
Sbjct: 445 NKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLF 504
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+M +KD ++WTAMI A +G G EA F++M+ G++PN VT+ +L+AC+ ++
Sbjct: 505 NKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD 564
Query: 392 KGRWCFVMMRHVYL-VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
GR + L + HV + ++++ S G +A ++ M + D+ + A++G
Sbjct: 565 WGRRIHQQVIEAGLATDAHVAN--TLVNMYSMCGSVKDARQVFDRMT-QRDIVAYNAMIG 621
Query: 451 GCQMHGNVELGEKVAQYLID------LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
G H LG K A L D L P + Y+N+ + A +G + K+ +L+ +
Sbjct: 622 GYAAH---NLG-KEALKLFDRLQEEGLKP-DKVTYINMLNACANSGSLEWAKEIHSLVLK 676
Query: 505 RG 506
G
Sbjct: 677 DG 678
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 231/507 (45%), Gaps = 82/507 (16%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSD- 95
E K++ +E+H II+ + + + + C GS+ A V++ + ++
Sbjct: 153 EVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQC-----GSIEEARQVWNKLNHTER 207
Query: 96 -LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
++++N M+ + + LKL ++M G++ T LL C
Sbjct: 208 TVHSWNAMV------VGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALE 261
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G ++ + +K + DV V N +++++ CG + AR
Sbjct: 262 CGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAR---------------------- 299
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
++F +M+ +++ SW II G+ G + A E+FQ+MQ +E V P++I
Sbjct: 300 ---------EVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQ----QEGVVPNRI 346
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T +VL+A + A+ GK VH ++ +G + D+ +GTALV MY KCG + VF+++
Sbjct: 347 TYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL 406
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA--------- 385
+D +AW MI A G +EA + + +M+ EG+ PN +T+V LL+AC
Sbjct: 407 VNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGR 466
Query: 386 --HSGLVEKGRWCFVMMRHVY-------------------LVEPHVYHYACMIDILSRAG 424
HS +V+ G + +++ +V + + MI L+++G
Sbjct: 467 EIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSG 526
Query: 425 LFSEAERLIRSMP---MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
L +EA + + M ++P+ + ++L C ++ G ++ Q +I+ A N
Sbjct: 527 LGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVAN 586
Query: 482 -LCDMYAKAGRFDDVKKTRNLMKERGI 507
L +MY+ G D ++ + M +R I
Sbjct: 587 TLVNMYSMCGSVKDARQVFDRMTQRDI 613
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 114/239 (47%), Gaps = 11/239 (4%)
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
A+++ Q +Q ++ + + +L C + + G+ VH ++ + D
Sbjct: 125 AMDVVQYLQ----QQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVN 180
Query: 313 ALVDMYGKCGCVERAYGVFKEM--PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
AL++MY +CG +E A V+ ++ ++ +W AM+ + GY +EA REM+ G+
Sbjct: 181 ALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGL 240
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
T + LLS+C +E GR V M+ L + +V + C++++ ++ G EA
Sbjct: 241 ALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVAN--CILNMYAKCGSIHEA 298
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL-NHAFYVNLCDMYA 487
+ M + V W ++GG G+ E+ ++ Q + + N Y+N+ + ++
Sbjct: 299 REVFDKMETKS-VVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS 356
>gi|357511223|ref|XP_003625900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500915|gb|AES82118.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 467
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 181/489 (37%), Positives = 270/489 (55%), Gaps = 49/489 (10%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH-IKRSDL 96
C+ +K+I QII + H+ I L + S L+Y + +F+H I + +
Sbjct: 20 CRTQIHVKQIQAQII----IHNLQSHTTIAEHLITASQS-HNLLNYVSPLFTHLIPKPHV 74
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+ +N +IRA + S +T L LY M I P+ TFPFL K + D +
Sbjct: 75 FIFNSLIRAFS--HSHIPNTP----LSLYSHMHKNSILPNNFTFPFLFKSLSDSHDFVQS 128
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
VY V+K G +D++V NS++ + Y
Sbjct: 129 QCVYTHVIKLGYVNDIYVNNSLLDV-------------------------------YASY 157
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G L++ LF M +R++ SW +I G+ GG+ +AL +F++MQ V P+++T+
Sbjct: 158 GCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGV----VPNRVTM 213
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+ LSACA AI+ G W+ +RR+G + DV++GTAL+DMY KCG VE VF +M +
Sbjct: 214 VNALSACASSCAIEMGVWIDDMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFCDMKE 273
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
K+ +I AL +EA F ME +GVR + VT V +LSAC+HSGLVEKGR+
Sbjct: 274 KNVFTLNVVIKGLALAKSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFI 333
Query: 397 FVMMRH-VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M+ Y P+V HYACM+D+L+RAG EA +I+ MP EP +WG+LL G +
Sbjct: 334 FSMLVDGKYGFLPNVKHYACMVDLLARAGQLQEAFDIIKCMPFEPTAAMWGSLLLGSKSR 393
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
++E E A L++L+P N A+YV L ++YA+AGR+ DV++ R +MKERG+ K++ GCS
Sbjct: 394 DDLEFSEFAATKLVELEPYNTAYYVQLSNLYAEAGRWSDVERIRGMMKERGLTKDL-GCS 452
Query: 516 SVEVDGVVH 524
SVEV+ H
Sbjct: 453 SVEVEHQRH 461
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 243/395 (61%), Gaps = 10/395 (2%)
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSAR-MLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
K G V NS++ L+ + G + AR +L+ + DVVSWN M+ GY + GDL A
Sbjct: 106 KCGALAHPVVTNSLLKLYCSLGLIDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAR 165
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
++F RM +RN+ SW++++ V+ G EAL +F M + E +PD + + SVL AC
Sbjct: 166 EVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRM----MREEFRPDVVVLVSVLKAC 221
Query: 284 AYLGAIDHGKWVHGYLRRS---GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
A+LGA++ G+WVH YL G ++++ TALVDMY KCGC+E A+ VF + ++D +
Sbjct: 222 AHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVV 281
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
W AMI A+NGYG+ A + FR M +G PN TF+ +L AC H+G V++G+ F M
Sbjct: 282 LWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSM 341
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+ Y ++P HY C+ D+L RAG EAE L+ MPMEP WGAL+ CQMH ++ +
Sbjct: 342 QD-YGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINV 400
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
GE+V + LI+L+P + YV L ++YA GR+++ + R +M++RG +KE G S +E++
Sbjct: 401 GERVGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKET-GLSFIELN 459
Query: 521 GVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G+VHEF + + ++ +L + + ++ G+
Sbjct: 460 GLVHEFISGDTRHPLTRKIYALLEDIERRLQLIGY 494
>gi|125532120|gb|EAY78685.1| hypothetical protein OsI_33787 [Oryza sativa Indica Group]
Length = 493
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 158/389 (40%), Positives = 241/389 (61%), Gaps = 6/389 (1%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVC-DDVFVQNSVISLFMACGFVTSARM 193
P LTFPFL + + + +V+ Q ++ G+ D+ V NS++ ++ AC AR
Sbjct: 60 PSHLTFPFLARAAARLASPRLARAVHAQPLRRGLLPQDLHVSNSLVHMYAACALPGLARR 119
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LFDE+ + VSWNA++ GY + DL A +F RM +R++ SW+++I G V+ G REA
Sbjct: 120 LFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHREA 179
Query: 254 LELFQEMQSSSV-EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
L +F+ M++++ + V+ + +T+ SVL ACA+LG + G+ +H YL G ++ + T
Sbjct: 180 LAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRLAT 239
Query: 313 ALVDMYGKCGCVERAYGVFKEMP--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
+LVDMY KCG + A VF +P D L W A+I A++G +E+ F++ME GV
Sbjct: 240 SLVDMYAKCGAIVEALEVFHAVPVESTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHAGV 299
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
P+ +T++ LLSAC H GLV++ W F + PHV HYAC++D+L RAG EA
Sbjct: 300 VPDEITYLCLLSACVHGGLVDEA-WRFFRSLEAQRLRPHVEHYACLVDVLGRAGRLEEAY 358
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
+++SMPM+P V V GALL C +HG VELGE V + L+ L P + Y+ L ++YA A
Sbjct: 359 GVVKSMPMKPSVSVLGALLNACHIHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAVAR 418
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
R+ + KK R +M+ERG++K VPG S ++V
Sbjct: 419 RWQEAKKARKVMEERGVKK-VPGFSEIDV 446
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 295/530 (55%), Gaps = 20/530 (3%)
Query: 40 NMRELKEIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
++R K++H Q+I++ P + +L+ + SG A VF+ + +
Sbjct: 285 SLRWGKQLHAQVIRNLPHIDPYVASALVE------LYAKSGCFKEAKGVFNSLHDRNNVA 338
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+ ++I T + ++L+ QM ++ D L+ C R+D +G
Sbjct: 339 WTVLISGFLQYGCFT------ESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQ 392
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
++ +K G V V NS+IS++ C + SA +F M+ +D+VSW +MI Y + G+
Sbjct: 393 LHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGN 452
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+ A + F M ++N+ +WN+++ ++Q G + L +++ M S EE V+PD +T +
Sbjct: 453 VAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS---EEYVRPDWVTYVT 509
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+ CA LGA G + G + GL D + A++ MY KCG + A VF + KD
Sbjct: 510 LFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKD 569
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++W AMI+ ++ +G GK+A + F ++ G +P+++++V +LS C+HSGLV++G++ F
Sbjct: 570 IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFD 629
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
MM+ + + P + H++CM+D+L RAG +EA+ LI MPM+P VWGALL C++HGN
Sbjct: 630 MMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNN 689
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
EL E A+++ +LD + Y+ + +YA AG+ DD + R LM+++GI+K PG S +E
Sbjct: 690 ELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN-PGYSWME 748
Query: 519 VDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSMEAQV 568
VD VH F + V +++ I L ++M+ Y+R S +++
Sbjct: 749 VDNKVHVFK---ADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEI 795
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 201/439 (45%), Gaps = 42/439 (9%)
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
H ++IT + + G LS A +F + D+ ++N ++ S
Sbjct: 68 HPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLM------SGYFQSRQYLVS 121
Query: 122 LKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L+ + M +G S P+ T +K C + + V KF DD V +++
Sbjct: 122 LETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVD 181
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
+F+ CG V A LF + + N+M+ GY+++ +D AL+LF M +R++ SWN +
Sbjct: 182 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMM 241
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
++ Q GR REAL++ +MQS V + D T S L+ACA L ++ GK +H +
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKGV----RLDSTTYTSSLTACARLSSLRWGKQLHAQVI 297
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
R+ D + +ALV++Y K GC + A GVF + ++ +AWT +IS F G E+ +
Sbjct: 298 RNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVE 357
Query: 361 TFREMEAEGVRPNHVTFVGLLSACA-----------HSGLVEKGRWCFVMMRHV------ 403
F +M AE + + L+S C HS ++ G+ V++ +
Sbjct: 358 LFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYA 417
Query: 404 -------------YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
++ E + + MI S+ G ++A M E +V W A+LG
Sbjct: 418 KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLG 476
Query: 451 GCQMHGNVELGEKVAQYLI 469
HG E G ++ + ++
Sbjct: 477 AYIQHGAEEDGLRMYKVML 495
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 189/383 (49%), Gaps = 45/383 (11%)
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR-MLFDE 197
F L+ C R +++G++V G+ VF+QN+++ +++CG ++ AR +L +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 65
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+++ +V++ N M+ GY + G L A++LF RM R++ SWN++++G+ Q + +LE F
Sbjct: 66 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 125
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
M S P+ T+A + +C LG + +++ D + ALVDM
Sbjct: 126 LSMHRSGDSW---PNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDM 182
Query: 318 YGKCGCVE-------------------------RAYGV------FKEMPKKDTLAWTAMI 346
+ +CG V+ + YGV F MP++D ++W M+
Sbjct: 183 FVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMV 242
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
S + +G +EA D +M+++GVR + T+ L+ACA + RW + V
Sbjct: 243 SALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR---LSSLRWGKQLHAQVIRN 299
Query: 407 EPHVYHY--ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG----NVEL 460
PH+ Y + ++++ +++G F EA+ + S+ +V W L+ G +G +VEL
Sbjct: 300 LPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNV-AWTVLISGFLQYGCFTESVEL 358
Query: 461 GEKVAQYLIDLDPLNHAFYVNLC 483
++ L+ LD A ++ C
Sbjct: 359 FNQMRAELMTLDQFALATLISGC 381
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 169/465 (36%), Positives = 255/465 (54%), Gaps = 9/465 (1%)
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
DL + ++ N+ S N K L ++++M+ G+ PD +T +L C+ D
Sbjct: 402 DLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLK 461
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G ++G V+ G+ +DVFV N+++SL+ C V A+++FD + +R+V SWN ++ Y
Sbjct: 462 SGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYF 521
Query: 215 RSGDLDVALDLFRRMKKRNI----FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
+ + + L +F +M + + +W+ +I G V+ R EA+E+F++MQ+ K
Sbjct: 522 TNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGF----K 577
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD+ TI S+L AC+ + GK +H Y+ R D D+ ALVDMY KCG + + V
Sbjct: 578 PDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNV 637
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F MP KD +W MI ++G GKEA F +M V+P+ TF +LSAC+HS LV
Sbjct: 638 FDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLV 697
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
E+G F M +LVEP HY C++DI SRAG EA I+ MPMEP W A L
Sbjct: 698 EEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLA 757
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
GC+++ NVEL + A+ L ++DP A YV L ++ A + + K R LMKERGI K
Sbjct: 758 GCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITK- 816
Query: 511 VPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
PGCS V VH F + +++ L+ L +K G+
Sbjct: 817 TPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGY 861
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 183/373 (49%), Gaps = 49/373 (13%)
Query: 25 ESTKLILRNAIDECKNMRELK---EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
++ L + + + C ++++LK EIH +++ ++ S C +
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCL-----CV 192
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A VF + D+ T+N + S N K L ++++M+ G+ PD +T
Sbjct: 193 REAQTVFDLMPHRDVVTWNSL------SSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVS 246
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
+L C+ D G +++G +K G+ ++VFV N++++L+ +C V A+ +FD M +R
Sbjct: 247 CILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHR 306
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
N+ +WNS+ + +V G ++ L +F+EM
Sbjct: 307 -------------------------------NVITWNSLASCYVNCGFPQKGLNVFREMG 335
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
+ V KPD + ++S+L AC+ L + GK +HG+ + G+ DV + TALV++Y C
Sbjct: 336 LNGV----KPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANC 391
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
CV A VF MP ++ + W ++ S + G+ ++ + FREM GV+P+ VT + +L
Sbjct: 392 LCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSIL 451
Query: 382 SACAHSGLVEKGR 394
AC+ ++ G+
Sbjct: 452 HACSDLQDLKSGK 464
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 150/327 (45%), Gaps = 37/327 (11%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
+K+Y GI PD F + K C D L + + GV DV + N+ I
Sbjct: 25 IKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHA 84
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ C V AR +FD++ RDVV+WN++ Y+ G L++FR+M
Sbjct: 85 YGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNK-------- 136
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
VK + +T++S+L C+ L + GK +HG++ R
Sbjct: 137 ---------------------------VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVR 169
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
G+ DV + +A V+ Y KC CV A VF MP +D + W ++ S + G+ ++ +
Sbjct: 170 HGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNV 229
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FREM +GV+P+ VT +LSAC+ ++ G+ +VE +V+ ++++
Sbjct: 230 FREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVE-NVFVSNALVNLYE 288
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGAL 448
EA+ + MP +V W +L
Sbjct: 289 SCLCVREAQAVFDLMPHR-NVITWNSL 314
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 295/530 (55%), Gaps = 20/530 (3%)
Query: 40 NMRELKEIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
++R K++H Q+I++ P + +L+ + SG A VF+ + +
Sbjct: 305 SLRWGKQLHAQVIRNLPHIDPYVASALVE------LYAKSGCFKEAKGVFNSLHDRNNVA 358
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+ ++I T + ++L+ QM ++ D L+ C R+D +G
Sbjct: 359 WTVLISGFLQYGCFT------ESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQ 412
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
++ +K G V V NS+IS++ C + SA +F M+ +D+VSW +MI Y + G+
Sbjct: 413 LHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGN 472
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+ A + F M ++N+ +WN+++ ++Q G + L +++ M S EE V+PD +T +
Sbjct: 473 VAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS---EEYVRPDWVTYVT 529
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+ CA LGA G + G + GL D + A++ MY KCG + A VF + KD
Sbjct: 530 LFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKD 589
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++W AMI+ ++ +G GK+A + F ++ G +P+++++V +LS C+HSGLV++G++ F
Sbjct: 590 IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFD 649
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
MM+ + + P + H++CM+D+L RAG +EA+ LI MPM+P VWGALL C++HGN
Sbjct: 650 MMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNN 709
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
EL E A+++ +LD + Y+ + +YA AG+ DD + R LM+++GI+K PG S +E
Sbjct: 710 ELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN-PGYSWME 768
Query: 519 VDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSMEAQV 568
VD VH F + V +++ I L ++M+ Y+R S +++
Sbjct: 769 VDNKVHVFK---ADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEI 815
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 201/439 (45%), Gaps = 42/439 (9%)
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
H ++IT + + G LS A +F + D+ ++N ++ S
Sbjct: 88 HPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLM------SGYFQSRQYLVS 141
Query: 122 LKLYKQMLCTGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L+ + M +G S P+ T +K C + + V KF DD V +++
Sbjct: 142 LETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVD 201
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
+F+ CG V A LF + + N+M+ GY+++ +D AL+LF M +R++ SWN +
Sbjct: 202 MFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMM 261
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
++ Q GR REAL++ +MQS V + D T S L+ACA L ++ GK +H +
Sbjct: 262 VSALSQSGRVREALDMVVDMQSKGV----RLDSTTYTSSLTACARLSSLRWGKQLHAQVI 317
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
R+ D + +ALV++Y K GC + A GVF + ++ +AWT +IS F G E+ +
Sbjct: 318 RNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVE 377
Query: 361 TFREMEAEGVRPNHVTFVGLLSACA-----------HSGLVEKGRWCFVMMRHV------ 403
F +M AE + + L+S C HS ++ G+ V++ +
Sbjct: 378 LFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYA 437
Query: 404 -------------YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
++ E + + MI S+ G ++A M E +V W A+LG
Sbjct: 438 KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLG 496
Query: 451 GCQMHGNVELGEKVAQYLI 469
HG E G ++ + ++
Sbjct: 497 AYIQHGAEEDGLRMYKVML 515
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 189/383 (49%), Gaps = 45/383 (11%)
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR-MLFDE 197
F L+ C R +++G++V G+ VF+QN+++ +++CG ++ AR +L +
Sbjct: 26 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 85
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+++ +V++ N M+ GY + G L A++LF RM R++ SWN++++G+ Q + +LE F
Sbjct: 86 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 145
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
M S P+ T+A + +C LG + +++ D + ALVDM
Sbjct: 146 LSMHRSGDSW---PNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDM 202
Query: 318 YGKCGCVE-------------------------RAYGV------FKEMPKKDTLAWTAMI 346
+ +CG V+ + YGV F MP++D ++W M+
Sbjct: 203 FVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMV 262
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
S + +G +EA D +M+++GVR + T+ L+ACA + RW + V
Sbjct: 263 SALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR---LSSLRWGKQLHAQVIRN 319
Query: 407 EPHVYHY--ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG----NVEL 460
PH+ Y + ++++ +++G F EA+ + S+ +V W L+ G +G +VEL
Sbjct: 320 LPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNV-AWTVLISGFLQYGCFTESVEL 378
Query: 461 GEKVAQYLIDLDPLNHAFYVNLC 483
++ L+ LD A ++ C
Sbjct: 379 FNQMRAELMTLDQFALATLISGC 401
>gi|225444117|ref|XP_002266487.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 553
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 264/443 (59%), Gaps = 14/443 (3%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G ++ A +F + DL ++N ++ A ND ++ + L L+K+M+ GI D
Sbjct: 122 TGQVTDARRLFDGMPHRDLASWNTLLGA-------YND-NAVEVLVLFKRMMYEGIGGDH 173
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
++ + C K G V+G V+K G+ + + N+++ ++ CG + +A+ LF E
Sbjct: 174 ISMVIVFSACGKIGGTEFGKEVHGYVIKVGIRPALSLSNALLGVYTKCGEMDAAQSLFVE 233
Query: 198 MSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
M+ RDVVS + GY+ G +D+A +F +M +++ SWNS+I +V+ ++A+EL
Sbjct: 234 MAAMRDVVSHTILFNGYVDMGSIDLARGIFDQMSVKDLVSWNSMIHAYVKAKHPKKAIEL 293
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F++M++ EMV+PD+ T+ SVL+ACA L + +G+ H ++ ++ D+ +GTAL+D
Sbjct: 294 FRKMEN----EMVEPDETTMVSVLAACASLADLQNGRLAHRFIIQNNPRQDLFVGTALID 349
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG +E A F +M +D WT I A +G+G +A F EME +G++PN T
Sbjct: 350 MYAKCGSLEEAMVTFYKMDSRDVFTWTTAIEGLANHGHGDKALSLFTEMEKQGIKPNQAT 409
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FV +L AC+ SGLV++G F M Y ++P + H C++DILSRAGL +AE I+ M
Sbjct: 410 FVSVLMACSRSGLVKEGCLLFKRMVEAYQIQPKIEHLGCLLDILSRAGLLHQAEEFIKLM 469
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
P + + LL C H +LGEK+A L +L +HA ++ L + YA AG++ +V
Sbjct: 470 PPKEKIIANKTLLSACMNHLEYDLGEKIANGLTELSSQSHATHILLSNFYALAGQWAEVA 529
Query: 497 KTRNLMKERGIRKEVPGCSSVEV 519
KTR +MKE IRK VPG SSV++
Sbjct: 530 KTRRVMKEIDIRK-VPGISSVDI 551
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 176/398 (44%), Gaps = 86/398 (21%)
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+ PD T+P +LK C + G V+ V K G+ DV+V N+++ L+ + G VT AR
Sbjct: 70 VFPDKYTYPAMLKACWRMGSLSKGKEVHAHVTKTGLDSDVYVGNALLHLYGSTGQVTDAR 129
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
LFD M +RD+ SWN ++ Y A E
Sbjct: 130 RLFDGMPHRDLASWNTLLGAY---------------------------------NDNAVE 156
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
L LF+ M + E + D I++ V SAC +G + GK VHGY+ + G+ + +
Sbjct: 157 VLVLFKRM----MYEGIGGDHISMVIVFSACGKIGGTEFGKEVHGYVIKVGIRPALSLSN 212
Query: 313 ALVDMYGKC--------------------------------GCVERAYGVFKEMPKKDTL 340
AL+ +Y KC G ++ A G+F +M KD +
Sbjct: 213 ALLGVYTKCGEMDAAQSLFVEMAAMRDVVSHTILFNGYVDMGSIDLARGIFDQMSVKDLV 272
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+W +MI + + K+A + FR+ME E V P+ T V +L+ACA ++ GR +
Sbjct: 273 SWNSMIHAYVKAKHPKKAIELFRKMENEMVEPDETTMVSVLAACASLADLQNGR-----L 327
Query: 401 RHVYLVEPH----VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
H ++++ + ++ +ID+ ++ G EA M DVF W + G HG
Sbjct: 328 AHRFIIQNNPRQDLFVGTALIDMYAKCGSLEEAMVTFYKMDSR-DVFTWTTAIEGLANHG 386
Query: 457 NVELGEKVAQYLIDLDPL----NHAFYVNLCDMYAKAG 490
+ G+K +++ N A +V++ +++G
Sbjct: 387 H---GDKALSLFTEMEKQGIKPNQATFVSVLMACSRSG 421
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
+WN +I F + A+ ++ V PDK T ++L AC +G++ GK V
Sbjct: 40 TWNCLIRAFSRSPTPITAILIYNHFIKG---RFVFPDKYTYPAMLKACWRMGSLSKGKEV 96
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H ++ ++GLD DV +G AL+ +YG G V A +F MP +D +W ++ + N
Sbjct: 97 HAHVTKTGLDSDVYVGNALLHLYGSTGQVTDARRLFDGMPHRDLASWNTLLGAY--NDNA 154
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE----PHVY 411
E F+ M EG+ +H++ V + SAC G E G+ H Y+++ P +
Sbjct: 155 VEVLVLFKRMMYEGIGGDHISMVIVFSACGKIGGTEFGKEV-----HGYVIKVGIRPALS 209
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV-----AQ 466
++ + ++ G A+ L M DV L G G+++L + +
Sbjct: 210 LSNALLGVYTKCGEMDAAQSLFVEMAAMRDVVSHTILFNGYVDMGSIDLARGIFDQMSVK 269
Query: 467 YLIDLDPLNHAF 478
L+ + + HA+
Sbjct: 270 DLVSWNSMIHAY 281
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 264/441 (59%), Gaps = 10/441 (2%)
Query: 118 SGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQV--VKFGVCDDVFVQ 175
+ + + + ML GI+PD +T +L C + D G S++ V + + D + V
Sbjct: 218 AAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVV- 276
Query: 176 NSVISLFMACGFVTSARMLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
++I ++ CG AR +FD + R WNAMI GY + G +D+A LF +M+ ++
Sbjct: 277 -ALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDV 335
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
++NS+ITG++ GGR REAL LF +M+ + D T+ +L+A A LGA+ G+
Sbjct: 336 ITFNSLITGYIHGGRLREALLLFTKMRRHGL----GADNFTMVGLLTASASLGALPQGRA 391
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
+H + + ++ DV +GTAL+DMY KCG VE A FK+M +D W+AMI A NG
Sbjct: 392 LHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGM 451
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
GK A + F M+ +G N VT++ +L+AC+HS L+++GR F MR ++ + P + HY
Sbjct: 452 GKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYG 511
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
CMID+L R+GL EA L+++MPM+P+ +W ++L C++H NV+L + A +L+ L+P
Sbjct: 512 CMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPA 571
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKV 534
A YV + ++Y + +++D K R LM++RG++K G SS+ V G VH+F +
Sbjct: 572 EDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTA-GYSSIAVAGQVHKFIVGDRSHP 630
Query: 535 VKEELVLILNGLSKIMKNGGF 555
E+V+++ + + +K+ G+
Sbjct: 631 QIAEIVVMMEEIGRRLKSAGY 651
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 203/455 (44%), Gaps = 53/455 (11%)
Query: 40 NMRELKEIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
++R+ E+H + S L L+ L + S L YA ++F + S +
Sbjct: 11 SVRQATELHALVTTSGRLLHPPSAAHLLNSLTSCISPSDPLHLRYALSLFDRMPCST-FL 69
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK-----RLDG 153
++ +RA SS + + + LY++M + PD TF FL K C + L
Sbjct: 70 FDTALRACFRASSGPD-----RPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGR 124
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
++ A+ + ++ V + + +I ++ G AR FDE S +DVV+W +I G
Sbjct: 125 MLHAACFRTLLPSAV---PLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGL 181
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
+ G LD A L R RN+ +W +I+G+ + GRA EA++ F M S + PD+
Sbjct: 182 AKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDG----IAPDE 237
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV--- 330
+T+ +LSAC L ++ G +H + + + AL+DMY KCG RA V
Sbjct: 238 VTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDA 297
Query: 331 -----------------------------FKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
F +M D + + ++I+ + G +EA
Sbjct: 298 LGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLL 357
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F +M G+ ++ T VGLL+A A G + +GR + LVE VY ++D+
Sbjct: 358 FTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQ-RLVERDVYLGTALLDMYM 416
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ G EA + M + DV W A++GG +G
Sbjct: 417 KCGRVEEAMVAFKQMSVR-DVHTWSAMIGGLAFNG 450
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 288/523 (55%), Gaps = 47/523 (8%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK 92
+A+ C+N+ +++++H Q L+ + +L++F S +L A +F +
Sbjct: 67 SALVNCRNLTQVRQVHAQASVHGMLENI---VVANKLIYF--YSYYRALDDAYGLFDGMC 121
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
D ++++M+ A N C +++++ G PD T PF+++ C +
Sbjct: 122 VRDSVSWSVMVGGFAKVGDYIN------CFGTFRELIRCGARPDNYTLPFVIRACRDLKN 175
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
+G ++ V KFG+ D FV +++ +++ C + AR LFD
Sbjct: 176 LQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFD---------------- 219
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+M++R++ +W +I G+ + G+A E+L LF++M+ EE V PD
Sbjct: 220 ---------------KMQERDLVTWTVMIGGYAECGKANESLVLFEKMR----EEGVVPD 260
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
K+ + +V+ ACA LGA+ + + Y++R DV++GTA++DMY KCGCVE A +F
Sbjct: 261 KVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 320
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
M +K+ ++W+AMI+ + +G G++A D F M + G+ P+ +T LL AC+H+GLVE+
Sbjct: 321 RMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEE 380
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G F M Y V V HY C++D+L RAG EA +LI+SM +E D +WGA LG C
Sbjct: 381 GLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGAC 440
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
+ H +V L EK A L++L N YV L ++YA AGR++DV K R+LM +R ++K P
Sbjct: 441 RTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKK-TP 499
Query: 513 GCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G + +EVD H+FS+ + +E+ +L LS ++ G+
Sbjct: 500 GWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGY 542
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 275/516 (53%), Gaps = 47/516 (9%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
N+ +++++H Q LQ +LI S +L A +F + D ++
Sbjct: 750 NLTQVRQVHXQASVHGMLQ-----NLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSW 804
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
++M+ A N C +++++ G PD T PF+++ C + +G +
Sbjct: 805 SVMVGGFAKVGDYMN------CFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLI 858
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ V KFG+ D FV +++ ++ C + AR LFD
Sbjct: 859 HHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFD----------------------- 895
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
+M +R++ +W +I G+ + G A E+L LF +M+ EE V PDK+ + +V
Sbjct: 896 --------KMXERDLVTWTVMIGGYAECGNANESLVLFDKMR----EEGVVPDKVAMVTV 943
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
+ ACA LGA+ + + Y++R DV++GTA++DM+ KCGCVE A +F M +K+
Sbjct: 944 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNV 1003
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++W+AMI+ + +G G++A D F M G+ PN +T V LL AC+H+GLVE+G F
Sbjct: 1004 ISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSX 1063
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M Y V V HY C++D+L RAG EA +LI SM E D +WGA LG C+ H +V
Sbjct: 1064 MWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVX 1123
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
L EK A L++L P N Y+ L ++YA AGR++DV K R+LM +R ++K +PG + +EV
Sbjct: 1124 LAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKK-IPGWTWIEV 1182
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
D H+FS+ + +E+ +L L ++ G+
Sbjct: 1183 DNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGY 1218
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 139/302 (46%), Gaps = 21/302 (6%)
Query: 179 ISLFMACGFVTSARMLFDEMSN----RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
IS + C +T R + + S ++V N +I Y LD A LF M R+
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
SW+ ++ GF + G F+E+ + +PD T+ V+ AC L + G+
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFREL----IRCGARPDNYTLPFVIRACRDLKNLQMGRL 181
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
+H + + GLD D + ALVDMY KC +E A +F +M ++D + WT MI +A G
Sbjct: 182 IHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGK 241
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC--FVMMRHVYLVEPHVYH 412
E+ F +M EGV P+ V V ++ ACA G + K R ++ + L V
Sbjct: 242 ANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQL---DVIL 298
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
MID+ ++ G A + M E +V W A++ HG G K +DL
Sbjct: 299 GTAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ---GRKA----LDLF 350
Query: 473 PL 474
P+
Sbjct: 351 PM 352
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 175/524 (33%), Positives = 281/524 (53%), Gaps = 19/524 (3%)
Query: 35 IDECKNMRELKEIHTQ--IIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK 92
+ C L+++H + QT H L+ F A +S L+YA ++F
Sbjct: 16 LSRCSTRAHLEQLHAHAFVAGRAAAQTTTFH-----LIRFAAFRLS-CLTYARHLFDATP 69
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLK-----LYKQMLCTG-ISPDCLTFPFLLKE 146
++ Y+ ++ A ++ + L+ +ML G +P+ +P +L+
Sbjct: 70 HPSVFLYSAILSAYVSAAATASSYAHAHAHARDALALFLRMLRHGRPAPNQFVYPLVLRA 129
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
+ G+V S++ K G C ++ SV+ + G + AR LFD ++ R+VVSW
Sbjct: 130 ASGVGVGIV-KSIHSHACKSGFCGHDIIRTSVLDGYSRHGMMADARKLFDGLTERNVVSW 188
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
A++ GY R+G + A+ LF RM +R++ +WN+II G Q G EA+ +F M +
Sbjct: 189 TALVSGYARAGKVGDAIVLFERMPERDVAAWNAIIAGCSQNGLFVEAVGIFGRMVGAGF- 247
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+P+ T++ VLSAC +LG + GK +H Y R+ + + L+DMYGKCG +E
Sbjct: 248 ---RPNATTVSCVLSACGHLGMLKIGKLIHCYAWRTCVGFGSSVLNGLIDMYGKCGNLEG 304
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A +F E+ + W ++I+ AL+G+ K A F EM EGV P+ VTFVGLL+AC H
Sbjct: 305 ARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNEMRGEGVEPDVVTFVGLLNACTH 364
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
G V++G F +M+H + +EP + HY C+ID+L RAG F +A +I M +E D +WG
Sbjct: 365 GGFVDEGIRYFELMQHEHGIEPEIEHYGCIIDLLGRAGRFQDALNVISDMRIEADEVMWG 424
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
+LL C++H VE E + L++LDP N + V L ++Y++ G +++V+K R +KE
Sbjct: 425 SLLNACRVHRQVEFAELAIRKLLELDPNNANYVVMLANVYSEGGLWEEVRKVRKFVKEEN 484
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
I K++PGCS +EVD H F E + L L+ M
Sbjct: 485 IGKKLPGCSWIEVDRKTHRFYSGDDAHPESENIYDTLEDLAASM 528
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 252/412 (61%), Gaps = 13/412 (3%)
Query: 153 GLVGASV--YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR-----DVVS 205
G V A+V + +++ GVC DV S+ S CG A+ + + R D+++
Sbjct: 248 GKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIA 307
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
NAM+ Y + +D A +F + R++ SWN++ITG++Q G A EA+ ++ +M +
Sbjct: 308 GNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHN--- 364
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
E +KP + T SVL A +YLG + G +H ++GL+ DV + T L+D+Y KCG +
Sbjct: 365 HEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLV 424
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
A +F+ MP++ T W A+I+ ++G+G +A F +M+ E ++P+HVTFV LL+AC+
Sbjct: 425 EAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACS 484
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
H+GLV++GR F +M+ VY + P HY CM+D+L RAG EA I+SMP++PD VW
Sbjct: 485 HAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVW 544
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
GALLG C++HGNVE+G+ +Q L +LDP N +YV + +MYAK G++D V R+L++ +
Sbjct: 545 GALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQ 604
Query: 506 GIRKEVPGCSSVEVDGVVHEF--SMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++K PG SS+EV G V F + P EE+ L+ L MK+ G+
Sbjct: 605 NLQK-TPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGY 655
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 145/327 (44%), Gaps = 44/327 (13%)
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVC-DDVFVQNSVISLFMACGFVTSA 191
+ PD TFP L++ A ++ ++ G+ +VF S++ ++ G V A
Sbjct: 65 LRPDSFTFPPLVRAAPGPASA---AQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
+FDEM RDV +WNAM+ G R+ RA
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRN-------------------------------TRAA 150
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
+A+ L M V E V D +T++SVL C LG +H Y + GL ++ +
Sbjct: 151 DAVTLLGRM----VGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVC 206
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
AL+D+YGK G + A+ VF M +D + W ++IS G A + F M GV
Sbjct: 207 NALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVC 266
Query: 372 PNHVTFVGLLSACAHSG--LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
P+ +T V L SA A G L K C+V R + + + M+D+ ++ A
Sbjct: 267 PDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGD--IIAGNAMVDMYAKMSKIDAA 324
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHG 456
+++ ++P + DV W L+ G +G
Sbjct: 325 QKVFDNLP-DRDVVSWNTLITGYMQNG 350
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
++PD T ++ A G + LR L +V +LV Y + G V AY
Sbjct: 65 LRPDSFTFPPLVRAAP--GPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAY 122
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF EMP++D AW AM+S N +A M EGV + VT +L C
Sbjct: 123 RVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMC---- 178
Query: 389 LVEKGRWCFVMMRHVYLVE----PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
V G ++ HVY V+ ++ +ID+ + G+ +EA + M + D+
Sbjct: 179 -VVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALR-DLVT 236
Query: 445 WGALLGGCQMHGNV 458
W +++ + G V
Sbjct: 237 WNSIISANEQGGKV 250
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 272/486 (55%), Gaps = 47/486 (9%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M E K++H Q++K ++ + L+ CALS GS+ YA ++F I + + +N
Sbjct: 1 MEEFKQVHAQVLKW------ENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFN 54
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
MIR N + L LY +ML G+ D T+P L K C G ++
Sbjct: 55 TMIRGY------VNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIH 108
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G + K G+ D+FVQNS+I+++ CG ++
Sbjct: 109 GYIFKRGLEGDLFVQNSLINMYGKCG-------------------------------KIE 137
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
++ +F M +R++ SW++II G E L +F EM S E +P++ + SVL
Sbjct: 138 LSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEM---SREGSCRPEESILVSVL 194
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SAC +LGA+D G+ H L R+ + +V++ T+L+DMY KCGC+E+ +F+ M KK+ L
Sbjct: 195 SACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQL 254
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+++ MI+ A++G G EA F +M EG++P+ V ++G+LSAC H+GLV++G CF M
Sbjct: 255 SYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRM 314
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+ + +EP + HY C++ ++ RAG+ ++A IRSMP++P+ VW LL C+ H N+E+
Sbjct: 315 KLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNLEI 374
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
GE A+ L +L+ N YV L +MYA+A R++DV K R M +G + PG S V+V+
Sbjct: 375 GEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGF-TQTPGFSLVQVE 433
Query: 521 GVVHEF 526
+++F
Sbjct: 434 RKIYKF 439
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 286/582 (49%), Gaps = 93/582 (15%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
++ S +L + + +C + + L++IHTQ + N L ++S+
Sbjct: 12 INTNTNHSPIFLLLSLLKQCPSTKTLQQIHTQFTIHSIHKPNH--------LLSQSISLK 63
Query: 79 GSLSYATNVFSHIK-RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+Y+T +FSHI + Y +NIM+RA + T L LY QM ISP+
Sbjct: 64 -DFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLT-----LHLYHQMKTLNISPNN 117
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDD----------------------VFVQ 175
TFPF+ C + + + +V K G+ +D VF +
Sbjct: 118 FTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDE 177
Query: 176 ---------NSVISLFMACGFVTSARMLF-----------DEMSNRDVVS---------- 205
NS++S + GF A +F DEMS V+
Sbjct: 178 ITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLEL 237
Query: 206 --W-----------------NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
W +A+I Y + G+L + +F M R+ +WN+ I+ + Q
Sbjct: 238 GRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQ 297
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G A EA+ LF M+ E V P+K+T+ +VLSACA +GA+D GK + Y GL
Sbjct: 298 NGMADEAISLFHSMK----ENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQH 353
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
D+ + TAL+DMY KCG +E A VF +MP+K+ +W AMIS A +G KEA F M
Sbjct: 354 DIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMS 413
Query: 367 AEG--VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
EG RPN +TFV LLSAC H+GLV++G F MM ++ + P + HY+CM+D+LSRAG
Sbjct: 414 DEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAG 473
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
EA +I MP +PD GAL CQ NV++GE+V Q L++LDP N Y+
Sbjct: 474 HLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSK 533
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+Y +DD + R LM+E G+ K PGCS +EV + EF
Sbjct: 534 IYENLNMWDDAARMRALMRENGVTK-TPGCSWIEVGNQLREF 574
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 218/345 (63%), Gaps = 5/345 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D N++IS ++ CG + A +LF M N+D+VSWN MI GY + G + A+ +FRRM
Sbjct: 358 DTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMN 417
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+RN SWNS+I+GFVQ R +AL F M+ + + D T AS L ACA L +
Sbjct: 418 RRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTN----RADWSTYASCLRACANLAVLH 473
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G+ +H L RSG D G AL+ Y KCG + A +F EM KD ++W A+I +A
Sbjct: 474 VGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYA 533
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
NG G EA FREMEA GVRP+ VTFVG+LSAC+H+GL+++G + F M YL++P
Sbjct: 534 SNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVA 593
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HYACM+D+L RAG +EA L++ M ++P+ VWGALLG C MH N EL + A+ L +
Sbjct: 594 EHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSE 653
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
L+P + YV L ++ A+AG++D+ +K R +KE+G+ K PG +
Sbjct: 654 LEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNKP-PGLA 697
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 121/545 (22%), Positives = 217/545 (39%), Gaps = 124/545 (22%)
Query: 23 NKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLI--TRLLF--------- 71
NKE T+L + + + + + + + L H I R LF
Sbjct: 22 NKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTV 81
Query: 72 -----FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA--------------------- 105
ALS G ++ A ++F + D +++ +M+
Sbjct: 82 SWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGDK 141
Query: 106 -----NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
NA S + +KL ++M +PD +++ L T+ + + +
Sbjct: 142 CTACYNAMISGYAKNGRFDDAMKLLREM----PAPDLVSWNSALAGLTQSGEMVRAVQFF 197
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
++VK D+ N +++ F+ G + +A F ++ + +V+SW ++ GY R+G +
Sbjct: 198 DEMVK-----DMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIA 252
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A DLF RM +RN+ +WN ++ G+V EA +LF +EM + I+ +++
Sbjct: 253 DARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLF--------DEMPIKNSISWTTII 304
Query: 281 SACAYLGAIDHGK----------------WVHGYLRRSGLD-----------CDVVIGTA 313
S A G + K +HGYL+R+ D D V
Sbjct: 305 SGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTVCWNT 364
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
++ Y +CG +E A +F+ MP KD ++W MI+ +A +G +A FR M R N
Sbjct: 365 MISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMN----RRN 420
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
V++ ++ SG V+ R FV H ++ L+
Sbjct: 421 TVSWNSVI-----SGFVQNDR--FVDALHHFM--------------------------LM 447
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRF 492
R D + + L C + +G ++ L+ +N +F N L YAK GR
Sbjct: 448 RRGTNRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRI 507
Query: 493 DDVKK 497
+ K+
Sbjct: 508 LEAKQ 512
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 137/325 (42%), Gaps = 27/325 (8%)
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
F N ++ G + +AR LFD M R+ V++NAM+ R G +D A LF M R
Sbjct: 19 FRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGR 78
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
N SWN++I GR +A LF M D+ + ++S A G ++
Sbjct: 79 NTVSWNAMIAALSDHGRVADARSLFDRMPVR--------DEFSWTVMVSCYARGGDLELA 130
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+ V R G C A++ Y K G + A + +EMP D ++W + ++ +
Sbjct: 131 RDVLD--RMPGDKCTACY-NAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQS 187
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
G A F EM + +T L+ A G V G + P+V
Sbjct: 188 GEMVRAVQFFDEMVKD------MTSWNLMLA----GFVRTGDLNAASSFFAKIESPNVIS 237
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
+ +++ RAG ++A L MP E +V W +L G +E K L D
Sbjct: 238 WVTLLNGYCRAGRIADARDLFDRMP-ERNVVAWNVMLDGYVHLSPIEEACK----LFDEM 292
Query: 473 PLNHAF-YVNLCDMYAKAGRFDDVK 496
P+ ++ + + A+AG+ + K
Sbjct: 293 PIKNSISWTTIISGLARAGKLQEAK 317
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 43/270 (15%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F + R + ++N +I S + L + M D
Sbjct: 404 GQMHKAIGIFRRMNRRNTVSWNSVI------SGFVQNDRFVDALHHFMLMRRGTNRADWS 457
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T+ L+ C VG ++ +V+ G +D F N++IS + CG + A+ +FDEM
Sbjct: 458 TYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEM 517
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+D+VSWNA+I GY G+ EA+ +F+
Sbjct: 518 VYKDIVSWNALIDGY-------------------------------ASNGQGTEAIAVFR 546
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA-LVDM 317
EM+++ V+PD++T +LSAC++ G ID G + + + L V A +VD+
Sbjct: 547 EMEANG----VRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMVDL 602
Query: 318 YGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
G+ G + A+ + + M + + W A++
Sbjct: 603 LGRAGKLNEAFELVQGMQIQPNAGVWGALL 632
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 284/528 (53%), Gaps = 94/528 (17%)
Query: 7 MVSYSLLNSPAK-----VSPPNKESTKL-ILRNAIDECKNMRELKEIHTQIIKSPCLQTN 60
+ S+ + SP + V P + E+ K+ +LRN + EL+++H QIIK TN
Sbjct: 38 LSSFPIPQSPNRNQIHNVKPQSSETLKIDLLRNF----NSPFELRQVHAQIIK-----TN 88
Query: 61 DHHSLI--TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHS 118
S++ TR+ CA + S YA +F +++ T+
Sbjct: 89 APLSILPLTRVGLVCAFT--PSFHYAQQIFKCVEKQKPETFVW----------------- 129
Query: 119 GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSV 178
CLK L G SP +D ++ ++ ++ ++ VC D F +SV
Sbjct: 130 NSCLK----ALAEGDSP---------------IDAIM---LFYRLRQYDVCPDTFTCSSV 167
Query: 179 ISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWN 238
+ AC L DL L ++K SW
Sbjct: 168 LR---AC----------------------------LNLLDLSNGRILHGVVEKVGFRSWT 196
Query: 239 SIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY 298
S+I G+VQ G+A+EA+ LF +M+ + V K +++T+ +VL+ACA LGA+D G +H Y
Sbjct: 197 SMIAGYVQCGKAKEAIHLFAKMEEAGV----KCNEVTVVAVLAACADLGALDLGMRIHEY 252
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
R G +V I L+DMY KCGC+E A VF+EM ++ ++W+AMI A++G +EA
Sbjct: 253 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEA 312
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F +M G+ PN VTF+GLL AC+H GL+ +GR F M Y + P + HY CM+D
Sbjct: 313 LRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVD 372
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+LSRAGL EA I +MPM+P+ VWGALLG C++H NVE+ E+ ++L++LDPLN +
Sbjct: 373 LLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY 432
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L ++YA+AGR++D + R MK+R ++K PG SS+ VDGVVHEF
Sbjct: 433 YVVLSNIYAEAGRWEDTARVRKFMKDRQVKK-TPGWSSITVDGVVHEF 479
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 258/446 (57%), Gaps = 9/446 (2%)
Query: 114 NDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF 173
N+ + + +++ ML G PD T +L D +VGA V+G V+K G+ D F
Sbjct: 217 NNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKF 276
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR- 232
V ++++ ++ CG V +FDE+ ++ S NA + G R+G +D AL++F + K +
Sbjct: 277 VVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQK 336
Query: 233 ---NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
N+ +W SII Q G+ EALELF++MQ+ VE P+ +TI S++ AC + A+
Sbjct: 337 MELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVE----PNAVTIPSLIPACGNISAL 392
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
HGK +H + R G+ DV +G+AL+DMY KCG ++ A F +M + ++W A++ +
Sbjct: 393 MHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGY 452
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A++G KE + F M G +P+ VTF +LSACA +GL E+G C+ M + +EP
Sbjct: 453 AMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPK 512
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI 469
+ HYAC++ +LSR G EA +I+ MP EPD VWGALL C++H N+ LGE A+ L
Sbjct: 513 MEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLF 572
Query: 470 DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMK 529
L+P N Y+ L ++YA G +D+ + R +MK +G+RK PG S +EV VH
Sbjct: 573 FLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKN-PGYSWIEVGHKVHMLLAG 631
Query: 530 GSPKVVKEELVLILNGLSKIMKNGGF 555
++++ L+ L+ MK G+
Sbjct: 632 DQSHPQMKDILEKLDKLNMQMKKSGY 657
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 204/456 (44%), Gaps = 68/456 (14%)
Query: 58 QTNDHHSLITRLLFFCALSVSGSL-SYATNVFS------------HIKRSDLYTYNIMIR 104
Q H+LI RL F ++ SL S+ N S H+ L++++ +I
Sbjct: 18 QARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIH 77
Query: 105 ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVV 164
A A H L + + + PD P +K C G ++
Sbjct: 78 AFA------RSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAA 131
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
G D V +S+ +++ C + AR LFD M +RDVV W+AMI GY R G ++ A +
Sbjct: 132 ASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKE 191
Query: 225 LFRRMK----KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
LF M+ + N+ SWN ++ GF G EA+ +F+ M + + PD T++ VL
Sbjct: 192 LFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMM----LVQGFWPDGSTVSCVL 247
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD-- 338
A L + G VHGY+ + GL D + +A++DMYGKCGCV+ VF E+ + +
Sbjct: 248 PAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIG 307
Query: 339 ---------------------------------TLAWTAMISVFALNGYGKEAFDTFREM 365
+ WT++I+ + NG EA + FR+M
Sbjct: 308 SLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM 367
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGR--WCFVMMRHVYLVEPHVYHYACMIDILSRA 423
+A GV PN VT L+ AC + + G+ CF + R ++ VY + +ID+ ++
Sbjct: 368 QAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIF---DDVYVGSALIDMYAKC 424
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
G A R M ++ W A++ G MHG +
Sbjct: 425 GRIQLARRCFDKMS-ALNLVSWNAVMKGYAMHGKAK 459
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/410 (39%), Positives = 247/410 (60%), Gaps = 12/410 (2%)
Query: 152 DGLVGASV-YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE--MSNRDVVSWNA 208
D L A + +GQ +K G V N ++ L+ A G ++ AR +FD ++ D SWN
Sbjct: 130 DRLAAAGLAHGQALKHGALAHPVVTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNT 189
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
M+ GY + GDL+ A ++F RM +R + SW+++I ++ G EAL +F +M +
Sbjct: 190 MVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGF--- 246
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL---DCDVVIGTALVDMYGKCGCVE 325
+PD + ++SVL ACA+LGA++ G+WVH +L+ GL +V++ TALVDMY KCGC++
Sbjct: 247 -RPDAVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMD 305
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
A+ VF + +D + W AMI A+NG+GK A + FR M G PN TFV +L AC
Sbjct: 306 EAWWVFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACT 365
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
H+G V++G+ F M + +EP HY C+ D+L RAGL EAE ++ MPMEP W
Sbjct: 366 HTGRVDEGKEIFRSMCD-HGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQW 424
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
GAL+ C MH NV +GE+V + LI+L+P + YV L ++YA G ++D K R +M+ER
Sbjct: 425 GALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEER 484
Query: 506 GIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G +KE G S +E +G+VHEF + ++ +L + + ++ G+
Sbjct: 485 GAKKET-GLSFIEWNGLVHEFRSGDTRHPQTRQIYALLEDMEQRLQLIGY 533
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 145/330 (43%), Gaps = 54/330 (16%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANAC-KSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G L A VF + L +++ MI +AC ++ E ++ L+++ QM+ G PD
Sbjct: 198 GDLEAAREVFVRMPERGLVSWSAMI--DACIRAGEFSEA-----LRMFDQMMGNGFRPDA 250
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGV---CDDVFVQNSVISLFMACGFVTSARML 194
+ +LK C G V+ + G+ D+V ++ +++ ++ CG + A +
Sbjct: 251 VVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWV 310
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD + ++DVV WNAMI G +G AL+LFRRM + GFV
Sbjct: 311 FDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRM----------LDMGFV--------- 351
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
P++ T VL AC + G +D GK + + G++ L
Sbjct: 352 ----------------PNESTFVVVLCACTHTGRVDEGKEIFRSMCDHGIEPRREHYGCL 395
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLA-WTAMISVFALN---GYGKEAFDTFREMEAEGV 370
D+ G+ G +E A V +MP + + W A++S ++ G G+ E+E +
Sbjct: 396 ADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIELEPD-- 453
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+ +V L + A +GL E + MM
Sbjct: 454 --DGGRYVVLFNLYAVNGLWEDAKALRKMM 481
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 191/569 (33%), Positives = 291/569 (51%), Gaps = 93/569 (16%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + I +CK+ LK+IH Q++ + + N S I L L+YA+ VF+
Sbjct: 36 LLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDL---------KDLAYASLVFNQ 86
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
+ + ++Y +N+M+R A + + C++LY ++ G+ + T+PFL C
Sbjct: 87 LTKPNIYAFNVMLRGLATTWKKYD-----FCVELYYKLKSLGLKANNFTYPFLFIACGN- 140
Query: 151 LDGLVGASV-----------------------YGQVVKFGVCDDVFVQ---------NSV 178
+ GLV + Y + + G VF + NS+
Sbjct: 141 VRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSM 200
Query: 179 ISLFMACGFVTSARMLF----------DEMSNRDVVS------------W---------- 206
IS + GF A LF DEM+ V+ W
Sbjct: 201 ISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKM 260
Query: 207 -------NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+A+I Y + GDL A +F M +++ +WN+IITG+ Q G + EA+ LF
Sbjct: 261 EVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNG 320
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M+ + PD++T+ VLSAC+ +GA+D GKWV + GL DV + +AL+DMY
Sbjct: 321 MREAGPH----PDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYA 376
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG--VRPNHVTF 377
KCG ++ A VF+ MP K+ ++W AMIS A +G +EA FR M + V+PN +TF
Sbjct: 377 KCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITF 436
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+G+LSAC H+GLV++GR F M + + P V HY+CM+D+ +RAGL EA LI+ MP
Sbjct: 437 IGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMP 496
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+PD V G+LLG CQ N ++GE+V Q ++++ N YV +YA R+DD K
Sbjct: 497 GKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAK 556
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R LM++ G+ K PGCS +++ VHEF
Sbjct: 557 MRVLMRQCGVSK-TPGCSWIDIGAHVHEF 584
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 201/614 (32%), Positives = 299/614 (48%), Gaps = 93/614 (15%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
++ S +L + + +C + + L++IHTQ + N L ++S+
Sbjct: 12 INTNTNHSPIFLLLSLLKQCPSTKTLQQIHTQFTIHSIHKPNH--------LLSQSISLK 63
Query: 79 GSLSYATNVFSHIK-RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+Y+T +FSHI + Y +NIM+RA + T L LY QM ISP+
Sbjct: 64 -DFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLT-----LHLYHQMKTLNISPNN 117
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDD----------------------VFVQ 175
TFPF+ C + + + +V K G+ +D VF +
Sbjct: 118 FTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDE 177
Query: 176 ---------NSVISLFMACGFVTSARMLF-----------DEMSNRDVVS---------- 205
NS++S + GF A +F DEMS V+
Sbjct: 178 ITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLEL 237
Query: 206 --W-----------------NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
W +A+I Y + G+L + +F M R+ +WN+ I+ + Q
Sbjct: 238 GRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQ 297
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
G A EA+ LF M+ E V P+K+T+ +VLSACA +GA+D GK + Y GL
Sbjct: 298 NGMADEAISLFHSMK----ENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQH 353
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
D+ + TAL+DMY KCG +E A VF +MP+K+ +W AMIS A +G KEA F M
Sbjct: 354 DIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMS 413
Query: 367 AEG--VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
EG RPN +TFV LLSAC H+GLV++G F MM ++ + P + HY+CM+D+LSRAG
Sbjct: 414 DEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAG 473
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
EA +I MP +PD GAL CQ NV++GE+V Q L++LDP N Y+
Sbjct: 474 HLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSK 533
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
+Y +DD + R LM+E G+ K PGCS +EV + EF + ++ I++
Sbjct: 534 IYENLNMWDDAARMRALMRENGVTK-TPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIID 592
Query: 545 GLSKIMKNGGFGQY 558
L + +K G+ Y
Sbjct: 593 LLYEELKKEGYLSY 606
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 237/394 (60%), Gaps = 14/394 (3%)
Query: 168 VCDDVFVQNSVISLF----MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
V D NS+IS + + C + +A++ FD ++ RD +WN +I GY L+
Sbjct: 141 VGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQ 200
Query: 224 DLFRRMK----KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
+L ++MK + N+++WN II+G V+ G AL LF EMQ+SS+ +PD T+ +
Sbjct: 201 NLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSL----RPDIYTVGII 256
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
L ACA L I GK VH + R G + DV IG ALVDMY KCG ++ A V+ + +
Sbjct: 257 LPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNL 316
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++ AM++ +A++G+G E FR M G RP+HVTF+ +LS+C H+G VE G F +
Sbjct: 317 VSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDL 376
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + Y V P + HY C++D+LSRAG EA L++ +P +PD +WGALLGGC + GNVE
Sbjct: 377 MTY-YNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVE 435
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LGE A+ LI+L+P N YV L ++YA AGR+ D+ +TR ++K+RG+ K PGCS +E
Sbjct: 436 LGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKS-PGCSWIED 494
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNG 553
+H F E++ L+ L+ M+ G
Sbjct: 495 REDIHVFLSCDKSHEKTEDIYTTLDNLNTHMRTG 528
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 156/349 (44%), Gaps = 49/349 (14%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L+L +M G P+ T +L C + + +G ++G V + G + FV N ++
Sbjct: 29 EALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEIHGYVTRHGFMSNPFVVNGLV 88
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK--KRNIFSW 237
++ C + SA +F S ++VVS+N MI+GY +G+++ A +LF +M+ ++ SW
Sbjct: 89 DVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISW 148
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
NS+I+G+ + ++K + + A + A+ G +
Sbjct: 149 NSMISGY--------------------ADNLLKCEDLKAAQL----AFDGVTER------ 178
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP----KKDTLAWTAMISVFALNG 353
D L+ Y C +E + ++M + + W +IS NG
Sbjct: 179 ---------DTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENG 229
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM-MRHVYLVEPHVYH 412
+ + A F EM+ +RP+ T +L ACA + +G+ +R Y ++ H+
Sbjct: 230 HNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHI-- 287
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
A ++D+ ++ G A ++ + P++ A+L MHG+ + G
Sbjct: 288 GAALVDMYAKCGSIKHAMQVYNRIS-NPNLVSQNAMLTAYAMHGHGDEG 335
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 138/308 (44%), Gaps = 44/308 (14%)
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
K N+ SW+++I GF Q G +EALEL MQ++ E P+ T+ASVL ACA L ++
Sbjct: 8 KPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFE----PNARTLASVLPACARLQNLN 63
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
GK +HGY+ R G + + LVD+Y +C + A +F K+ +++ MI +
Sbjct: 64 LGKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYC 123
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS---------------GLVEK--- 392
NG ++A + F +ME G + +++ ++S A + G+ E+
Sbjct: 124 ENGNVEKAKELFDQMELVG--KDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTA 181
Query: 393 -------GRWCFVMMRHVYLV---------EPHVYHYACMIDILSRAGLFSEAERLIRSM 436
G C + ++ + EP+VY + +I G A RL M
Sbjct: 182 TWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEM 241
Query: 437 ---PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD-PLNHAFYVNLCDMYAKAGRF 492
+ PD++ G +L C + G++V + I L+ L DMYAK G
Sbjct: 242 QTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSI 301
Query: 493 DDVKKTRN 500
+ N
Sbjct: 302 KHAMQVYN 309
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 143/349 (40%), Gaps = 79/349 (22%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANAC-----------------------------KSS 111
L A F + D T+N++I AC S
Sbjct: 165 LKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISG 224
Query: 112 ETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDD 171
+ H+ L+L+ +M + + PD T +L C + G V+ ++ G D
Sbjct: 225 HVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELD 284
Query: 172 VFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
V + +++ ++ CG + A +++ +SN ++VS NAM+ Y G D + LFR M
Sbjct: 285 VHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNM-- 342
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
+ GF +PD +T SVLS+C + GA++
Sbjct: 343 --------LGNGF-------------------------RPDHVTFLSVLSSCVHAGAVET 369
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK-DTLAWTAMISVFA 350
G + + + T +VD+ + G ++ AY + K++P+K D++ W A++
Sbjct: 370 GHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCV 429
Query: 351 LNG---YGKEAFDTFREMEAEGVRPNHV-TFVGLLSACAHSGLVEKGRW 395
+ G G+ A ++ E+E PN+ +V L + A++ GRW
Sbjct: 430 IWGNVELGEIAAESLIELE-----PNNTGNYVLLANLYAYA-----GRW 468
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
E K + ++W+A+I FA NGY KEA + M+A G PN T +L ACA +
Sbjct: 5 ENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNL 64
Query: 393 GRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
G+ + RH ++ P V + ++D+ R A ++ ++ V ++G
Sbjct: 65 GKEIHGYVTRHGFMSNPFVVN--GLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGY 122
Query: 452 CQMHGNVELGEKV 464
C+ +GNVE +++
Sbjct: 123 CE-NGNVEKAKEL 134
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 7/145 (4%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS+ +A V++ I +L + N M+ A A H + + L++ ML G PD +
Sbjct: 299 GSIKHAMQVYNRISNPNLVSQNAMLTAYAMHG------HGDEGIALFRNMLGNGFRPDHV 352
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF +L C G + + + V + ++ L G + A L ++
Sbjct: 353 TFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKI 412
Query: 199 SNR-DVVSWNAMIIGYLRSGDLDVA 222
+ D V W A++ G + G++++
Sbjct: 413 PRKPDSVMWGALLGGCVIWGNVELG 437
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 206/558 (36%), Positives = 292/558 (52%), Gaps = 71/558 (12%)
Query: 14 NSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFC 73
NSP+ + N L L + C +M +LK++H L+T T L+
Sbjct: 18 NSPSASTAGNHHRRILSL---AETCSDMSQLKQLHAFT-----LRTTYPDEPATLFLYGK 69
Query: 74 ALSVSGSLS---YATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
L +S S S YA VF I+ + +N +IRA A S + LY++ML
Sbjct: 70 ILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEA-----FMLYRKMLE 124
Query: 131 TGIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
G S PD TFPF+LK C G V+ Q+VK G DV+V N +I + +CG
Sbjct: 125 RGESAPDKHTFPFVLKACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGC-- 182
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
LD+A +F M +R++ SWNS+I V+ G
Sbjct: 183 -----------------------------LDLARKVFDEMPERSLVSWNSMIDALVRVGE 213
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS---GLDC 306
AL+LF++MQ S +PD T+ SVLSACA LG++ G W H +L R+ +
Sbjct: 214 YDSALQLFRDMQKS-----FEPDGYTMQSVLSACAGLGSLSLGTWSHVFLLRNCDVDVAM 268
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
DV+I +L++MY KCG + A VF+ M K D +W AMI FA +G +EA + F M
Sbjct: 269 DVLIKNSLIEMYCKCGSLRMAEQVFQGMRKHDLASWNAMILGFATHGKAEEAMNCFDCMV 328
Query: 367 AEG--VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
EG V+PN VTFV LL AC H G+V KGR F MM Y +EP + HY C+ID+L+RAG
Sbjct: 329 KEGKNVKPNSVTFVALLIACNHRGMVNKGRQYFDMMVREYGIEPALEHYGCIIDLLARAG 388
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHG-NVELGEKVAQYLIDLDPLNHA------ 477
+EA ++ SMPM+PD +W +LL C G +VEL E++A+ +I N +
Sbjct: 389 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTMEDNQSSNSNCS 448
Query: 478 -FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF----SMKGSP 532
YV L +YA A R++DV R LM + GIRKE PGCSS+E++G+ +EF +
Sbjct: 449 GAYVLLSRVYASANRWNDVGIVRKLMSDHGIRKE-PGCSSIEINGISNEFFAGDTSHPQT 507
Query: 533 KVVKEELVLILNGLSKIM 550
K + ++L +I + L I+
Sbjct: 508 KQIYQQLKVIDDRLRSIV 525
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 297/546 (54%), Gaps = 56/546 (10%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
+P + + + IL C + +L +IH I+K+ LQ N ++T+ F S
Sbjct: 10 TPKTRLTEQTILTLLNSHCNTLSKLTQIHAFILKTG-LQNNP--LILTK--FTSTSSNLN 64
Query: 80 SLSYATNVF---SHIKRS-----DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
S+ YAT+ SH + D + +N +IRA S+T D+ S L Y+ ML
Sbjct: 65 SIHYATSFLFPPSHTTSTPTPSYDAFLFNTLIRA----YSQTRDSKSNSFL-FYRTMLRY 119
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF--VT 189
G++P+ TFPF+LK C +G V+G VVKFG +DV V N++I ++ G
Sbjct: 120 GVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFE 179
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
A +FD+ D V+W+AM I GFV+ G
Sbjct: 180 FAEKVFDDSPKMDTVTWSAM-------------------------------IAGFVRLGC 208
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
+ A++LF+EMQ V PD+IT+ SVLSACA LGA++ GKWV Y+ + + V
Sbjct: 209 SSRAVDLFREMQVMGV----CPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVE 264
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+ AL+DM+ KCG V++A +F++M + ++WT++I+ A++G G +A F EM G
Sbjct: 265 LCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENG 324
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
+ P+ V F+G+LSAC+HSGLV+KGR+ F M + + P V HY CM+D+L R G EA
Sbjct: 325 ITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEA 384
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
++ MP EP+ +W ++ C G ++LGE +++ LI +P++ + YV L ++YAK
Sbjct: 385 FEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKL 444
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
+++ K R +M RG++K VPG + +EV+ ++EF +E+ +++ + +
Sbjct: 445 RQWEKKTKVREMMDMRGMKK-VPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGRE 503
Query: 550 MKNGGF 555
+K G+
Sbjct: 504 IKKAGY 509
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 272/494 (55%), Gaps = 21/494 (4%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
C N+ L++ ++ Q + L+ R ++ A G SYA +VF R +
Sbjct: 39 HCTNLSHLQQTQGFMLTRGLDQDD---ILLARFIYTSA--SLGLSSYAYSVFISNHRPSI 93
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+ YN +I A S +N T + + L+ + G+ PD +FPF+LK VG
Sbjct: 94 FFYNNVIWA----LSSSNPT---RAISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHVG 146
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++ Q + G+ V S++ ++ +C ++SAR LFD + + WNAM+ GY +
Sbjct: 147 KQIHCQAIVSGLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAKV 206
Query: 217 GDLDVALDLFRRM--KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
G++ A +LF M K R++ SW ++I+G+ Q EA+ LF+ M + + V+PD+I
Sbjct: 207 GNMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIM----LLQNVQPDEI 262
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRR--SGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
I +VLSACA LGA+ G+W+H Y+ + + L V + +L+DMY K G + +A +F+
Sbjct: 263 AILAVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQ 322
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
M K + WT +IS AL+G+GKEA D F ME V+PN VT + +LSAC+H GLVE
Sbjct: 323 NMKHKTIITWTTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVEL 382
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
GR F MR Y +EP + HY CMID+L RAG EA L+R MP E + VWG+LL
Sbjct: 383 GRNIFTSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSAS 442
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
+G+ L + ++L L+P N Y L + YA G + + R +M++ K VP
Sbjct: 443 NRYGDAALAAEALRHLSVLEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMRDTCAEK-VP 501
Query: 513 GCSSVEVDGVVHEF 526
G S VE++ V+EF
Sbjct: 502 GVSFVELNNRVYEF 515
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 256/425 (60%), Gaps = 9/425 (2%)
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D +++ LL + ++ VY ++ GV D+ S+ S+ G S+R +
Sbjct: 305 DIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIH 364
Query: 196 DEMSNR-----DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
++ R D+ NA+I Y + G +D A +F + +++ SWNS+ITG+ Q G A
Sbjct: 365 GFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLA 424
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
EA++++ M+ S P++ T S+L+A + LGA+ G HG L ++ L D+ +
Sbjct: 425 NEAIDVYSSMRYYS---GAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFV 481
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
T LVDMYGKCG + A +F E+P + +++W A+IS L+GYG +A F+EM++EGV
Sbjct: 482 STCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGV 541
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
+P+H+TFV LLSAC+HSGLV++G+WCF +M+ Y + P + HY CM+D+ RAG +A
Sbjct: 542 KPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAF 601
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
+++MP+ PDV VWGALLG C++H NVEL V+ +L+ ++ N +YV L ++YAK G
Sbjct: 602 NFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLG 661
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
++ V + R+L ++RG++K PG SS+EVD + F EE+ L L+ M
Sbjct: 662 HWEGVDEVRSLARDRGLKK-TPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKM 720
Query: 551 KNGGF 555
K+ G+
Sbjct: 721 KSIGY 725
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 202/451 (44%), Gaps = 57/451 (12%)
Query: 10 YSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHS-LITR 68
YS +P + E ++ C + K++H ++ S Q+ + LI R
Sbjct: 25 YSATAAPKYLDGVENEKREIDFNRIFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINR 84
Query: 69 LLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM 128
F G + +A F I+ D+YT+N MI A A H + + +
Sbjct: 85 YAFL------GDIPHARLTFDQIQTKDVYTWNSMISAYA------RIGHFHAAVDCFNEF 132
Query: 129 LCTG-ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGF 187
L T + D TFP +++ C DG V+ V+K G DV++ S I + GF
Sbjct: 133 LSTSFLQSDHYTFPPVIRACGNLDDG---RKVHCLVLKLGFECDVYIAASFIHFYSRFGF 189
Query: 188 VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
V+ +A +LF M R+I +WN++I+GF
Sbjct: 190 VS-------------------------------LACNLFDNMMIRDIGTWNAMISGFYLN 218
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
G+ EALE+F EM+ SV D +TI+S+L C L I G +H Y + GL+ D
Sbjct: 219 GKVAEALEVFDEMRFKSVSM----DSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFD 274
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+ + AL++MY K G + A +F +M +D ++W ++++ F N A + +M +
Sbjct: 275 LFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHS 334
Query: 368 EGVRPNHVTFVGLLSACAHSG--LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
GV P+ +T V L S A G L + FV R +L + + + +ID+ ++ G
Sbjct: 335 IGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGN--AIIDMYAKLGF 392
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
A ++ +P++ DV W +L+ G +G
Sbjct: 393 IDSARKVFEGLPVK-DVISWNSLITGYSQNG 422
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+I Y GD+ A F +++ +++++WNS+I+ + + G A++ F E S+S
Sbjct: 81 LINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTS---F 137
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
++ D T V+ AC G +D G+ VH + + G +CDV I + + Y + G V A
Sbjct: 138 LQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLAC 194
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F M +D W AMIS F LNG EA + F EM + V + VT LL C
Sbjct: 195 NLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLD 254
Query: 389 LVEKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+ G ++ HVY + E ++ +I++ ++ G AE + M + D+
Sbjct: 255 DIISG-----VLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVR-DIVS 308
Query: 445 WGALLGGCQMHGN--VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
W +LL + + + LG + I + P + V+L + A+ G F + +
Sbjct: 309 WNSLLAAFEQNKKPVIALGVYNKMHSIGVVP-DLLTLVSLASVAAELGNFLSSRSIHGFV 367
Query: 503 KER 505
R
Sbjct: 368 TRR 370
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 10/177 (5%)
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
Y + K +H L SG + + L++ Y G + A F ++ KD W +
Sbjct: 52 YCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNS 111
Query: 345 MISVFALNGYGKEAFDTFRE-MEAEGVRPNHVTFVGLLSACAHSGLVEKGR--WCFVMMR 401
MIS +A G+ A D F E + ++ +H TF ++ AC G ++ GR C V+
Sbjct: 112 MISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKL 168
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
E VY A I SR G S A L +M M D+ W A++ G ++G V
Sbjct: 169 G---FECDVYIAASFIHFYSRFGFVSLACNLFDNM-MIRDIGTWNAMISGFYLNGKV 221
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/484 (36%), Positives = 273/484 (56%), Gaps = 38/484 (7%)
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLLKECTK---- 149
++Y + I A A +S + G L L++ ML G+ P+ T +++ C+
Sbjct: 75 NVYLWTATIAAYARHASSSLSAAEG-ALALFRLMLRRGVPRPNAFTASSVVRCCSALRAV 133
Query: 150 ----RLDGL-----------VGASV---YGQVVKFGVCDDVF---------VQNSVISLF 182
++ G VGA++ YG + + VF + N++++ +
Sbjct: 134 REGIQVHGFLFSAGLGRASHVGAALVDMYGSLGRVADARRVFDEMPSTNVVLGNTMVACY 193
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
+ G V + R +FD M+ RD +SWN +++GYLR G+ VA DLF M RN+ SWN +I
Sbjct: 194 VRAGDVEAGRDVFDRMAERDPISWNTLMMGYLRQGEAGVARDLFEEMPDRNVNSWNMVIA 253
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
Q G +A+E+F M+ + + PD T+A ++SACA LG++ VHG LR+
Sbjct: 254 ACSQEGLWADAVEVFNRMRLARFQ----PDPATMAVLMSACAQLGSLSIASQVHGILRKG 309
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
++ + + +L+DMY KCG V +A+ +F E KDT+++ MI A +G+G++A F
Sbjct: 310 CVEMNFHVLNSLIDMYAKCGSVSQAHLLFVETRLKDTVSYNVMICALAQHGHGRDALQIF 369
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
EM EG++P+ VTF+G+LSACAH+GLV G++ F MR Y +E HYACM+D+ R
Sbjct: 370 DEMSEEGLQPDAVTFLGVLSACAHAGLVHDGKFYFESMRTNYAIEQSPDHYACMVDLYGR 429
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNL 482
AGL EA +L R+MP++P VWGAL+ C+ H NVE+G+ A+ LI ++P N YV L
Sbjct: 430 AGLIEEAYQLARAMPVKPHAGVWGALINACRKHCNVEVGKVAARELIAIEPGNPGTYVLL 489
Query: 483 CDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLI 542
+ A+ ++D V+ M+ +GI K GCS +EVD VVHEF M S +E+ I
Sbjct: 490 ANTLARGQQWDFVETVWQSMRGKGIEKTA-GCSWLEVDRVVHEFLMGESSHPNSDEIYCI 548
Query: 543 LNGL 546
L L
Sbjct: 549 LEHL 552
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 26 STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVSGSLSY 83
+T +L +A + ++ ++H I++ C++ N H +SLI + C GS+S
Sbjct: 281 ATMAVLMSACAQLGSLSIASQVHG-ILRKGCVEMNFHVLNSLID-MYAKC-----GSVSQ 333
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A +F + D +YN+MI A A H L+++ +M G+ PD +TF +
Sbjct: 334 AHLLFVETRLKDTVSYNVMICALA------QHGHGRDALQIFDEMSEEGLQPDAVTFLGV 387
Query: 144 LKECT 148
L C
Sbjct: 388 LSACA 392
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 277/485 (57%), Gaps = 46/485 (9%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
CKN+ ++K++H I + L N ++ +LL+ + +YA +F + + +
Sbjct: 1092 CKNICQIKQLHALITTNSVLYNN--LTVANKLLYVYVHHKCLTDAYA--LFDEMPQKNPV 1147
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
+++IMI K E +C K +K+++ G+ PD T PF++K C + +G
Sbjct: 1148 SWSIMI-GGFVKVGEF-----MQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGR 1201
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++ V+K+G+ D FV +++ ++ C + A++LFD M ++D+V+W MI GY
Sbjct: 1202 LIHCVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGY---- 1257
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
+ G A+E+L LF ++ EE PDKI +
Sbjct: 1258 ---------------------------AECGNAKESLVLFDHLR----EEGFVPDKIAMV 1286
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
S+++ACA LGA++ ++VH Y+ R+ DV++GTA++DMY KCG V+ A +F M K
Sbjct: 1287 SIVNACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHK 1346
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+ ++W+AMI+ + +G GK+A + F M + G+ PN++TFV LL AC+H+GLVE G
Sbjct: 1347 NVISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLL 1406
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+M + V P + H+ CM+D+L RAG +EA R I +M +E D +W +LLG C++H
Sbjct: 1407 SLMWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIHKR 1466
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
++L EK A+ L++L P N Y+ L ++YA AG++ DV K R+LM +R ++K +PG + +
Sbjct: 1467 IDLAEKAAKSLLELQPQNPGNYILLSNIYANAGQWKDVAKIRDLMTKRKLKK-IPGYTWI 1525
Query: 518 EVDGV 522
E+ +
Sbjct: 1526 ELKSI 1530
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 182/393 (46%), Gaps = 38/393 (9%)
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ--NSVISLFMACGFVTSARM 193
D ++ P +E T +D V Q++K D F N +IS + C + +
Sbjct: 1048 DTISQPQFHQEAT--IDPPVT-----QILKISNPDFSFFMDPNCLISTLLNCKNICQIKQ 1100
Query: 194 LFDEMSNRDVVSWNAMIIG-----YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
L ++ V+ N + Y+ L A LF M ++N SW+ +I GFV+ G
Sbjct: 1101 LHALITTNSVLYNNLTVANKLLYVYVHHKCLTDAYALFDEMPQKNPVSWSIMIGGFVKVG 1160
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
+ + F+E+ + V+PD T+ V+ AC A+D G+ +H + + GL D
Sbjct: 1161 EFMQCYKTFKEL----IRNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDH 1216
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
+ ALVDMY KC +E A +F MP KD + WT MI +A G KE+ F + E
Sbjct: 1217 FVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLREE 1276
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
G P+ + V +++ACA G + K R+ + R+ + ++ V MID+ ++ G
Sbjct: 1277 GFVPDKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLD--VILGTAMIDMYAKCGDVD 1334
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL--------NHAFY 479
A + +M +V W A++ HG G+K ++L P+ N+ +
Sbjct: 1335 SAREIFDNM-HHKNVISWSAMIAAYGYHGQ---GKKA----LELFPMMLSSGILPNNITF 1386
Query: 480 VNLCDMYAKAGRFDDVKKTRNLMKER-GIRKEV 511
V+L + AG +D +LM E G+R ++
Sbjct: 1387 VSLLYACSHAGLVEDGLTLLSLMWESFGVRPDI 1419
>gi|356527575|ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Glycine max]
Length = 577
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 268/507 (52%), Gaps = 42/507 (8%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS---------- 82
I +CK++ +L ++H HS+ T LL + ++
Sbjct: 5 QVIKQCKSISQLHQVHA-------------HSITTGLLPLHTFPILNNILSTLSSLLTTS 51
Query: 83 ---------YATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGI 133
YA ++F I +++N +IR + S L L+ + +
Sbjct: 52 SNSNSIITFYALSLFHSIPNPSTFSFNTLIRIHTLLLSPL------PALHLFSTLRRLSL 105
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
PD TFPF+LK + + S++ Q +KFG+ D+F N++I ++ V A
Sbjct: 106 PPDFHTFPFVLKASAQLHSLSLAQSLHSQALKFGLLPDLFSLNTLIGVYSIHHRVNDAHK 165
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LF E + DVVS+NA+I G +++ + A +LF M R+ SW ++I G+ +A
Sbjct: 166 LFYECPHGDVVSYNALIHGLVKTRQISRARELFDEMPVRDEISWGTMIAGYSHLKLCNQA 225
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
+ELF EM V KPD I + SVLSACA LG ++ G VH Y++R+ + D + T
Sbjct: 226 IELFNEMMRLEV----KPDNIALVSVLSACAQLGELEQGSIVHDYIKRNRIRVDSYLATG 281
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
LVD+Y KCGCVE A VF+ +K W AM+ FA++G G + F M +EGV+P+
Sbjct: 282 LVDLYAKCGCVETARDVFESCMEKYVFTWNAMLVGFAIHGEGSMVLEYFSRMVSEGVKPD 341
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
VT +G+L C+H+GLV + R F M +VY V+ HY CM D+L+RAGL E ++
Sbjct: 342 GVTLLGVLVGCSHAGLVLEARRIFDEMENVYGVKREGKHYGCMADMLARAGLIEEGVEMV 401
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
++MP DVF WG LLGGC++HGNVE+ +K AQ ++++ P + Y + ++YA ++D
Sbjct: 402 KAMPSGGDVFAWGGLLGGCRIHGNVEVAKKAAQQVMEIKPEDGGVYSVMANIYAHTEQWD 461
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVD 520
D+ K R + K++ G S + ++
Sbjct: 462 DLVKVRRSLSANKRAKKITGRSLIRLN 488
>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 629
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/513 (35%), Positives = 276/513 (53%), Gaps = 22/513 (4%)
Query: 20 SPPNKESTKLILRNAIDECKN---MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS 76
S ++ LI R+ + +C +R +++H S L + L L + +
Sbjct: 4 SHTTQQQCALIFRSLLRQCARASAVRPGEQLHAAATVSGLLFSPSSFLLNALLHLYASCP 63
Query: 77 VSGSLSYATNVFSHIKRS--DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS 134
+ S+A +F I S D Y +IR +H L+ Y QM +
Sbjct: 64 LP---SHARKLFDRIPHSHKDSVDYTALIRC----------SHPLDALRFYLQMRQRALP 110
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
D + L C+K D + ++ VVKFG V N V+ ++ CG V AR +
Sbjct: 111 LDGVALICALGACSKLGDSNLVPQMHVGVVKFGFLRHTKVLNGVMDGYVKCGLVGEARRV 170
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F+E+ VVSW ++ G ++ ++ +F M +RN +W +I G+V G +EA
Sbjct: 171 FEEIEEPSVVSWTVVLEGVVKCEGVESGKVVFDEMPERNEVAWTVLIKGYVGSGFTKEAF 230
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY-LRRSGLDCDVVIGTA 313
L +EM + IT+ SVLSAC+ G + G+WVH Y ++ G D V++GT+
Sbjct: 231 LLLKEM-VFGCGFGFGLNSITLCSVLSACSQSGDVSVGRWVHCYAVKAVGWDLGVMVGTS 289
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
LVDMY KCG + A VF+ MP+++ +AW AM+ A++G GK + F M E V+P+
Sbjct: 290 LVDMYAKCGRISAALMVFRHMPRRNVVAWNAMLCGLAMHGMGKVVVEMFACM-VEEVKPD 348
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
VTF+ LLS+C+HSGLVE+G F + Y + P + HYACM+D+L RAG EAE L+
Sbjct: 349 AVTFMALLSSCSHSGLVEQGWQYFHDLERAYGIRPEIEHYACMVDLLGRAGRLEEAEDLV 408
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
+ +P+ P+ V G+LLG C HG + LGEK+ + L+ +DPLN +++ L +MYA G+ D
Sbjct: 409 KKLPIPPNEVVLGSLLGACYAHGKLRLGEKIMRELVQMDPLNTEYHILLSNMYALCGKAD 468
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R ++K RGIRK VPG SS+ VDG +H F
Sbjct: 469 KANSLRKVLKNRGIRK-VPGMSSIYVDGQLHRF 500
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/470 (36%), Positives = 268/470 (57%), Gaps = 17/470 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A+ VF + + D +YN MI C+ L ++ L +
Sbjct: 176 GCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNL--------I 227
Query: 139 TFPFLLKECTKRLDG-LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
++ L++ + DG LV ++ ++ + D+ NS+I + CG + A+ LFD
Sbjct: 228 SWNSLIRGYAQSEDGILVAWQLFAKMPE----RDLISWNSMIDGCVKCGRMEDAQGLFDR 283
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M NRD+VSW MI GY ++G +D+A LF M +R++ ++N+++ G+VQ G EAL +F
Sbjct: 284 MPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIF 343
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
MQS + D T+ LSA A LG ID G +H ++ G D +G AL+DM
Sbjct: 344 YGMQSDGNFLL---DNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDM 400
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG +E A VF+ + +K W A+I A++G G+ AFD EME V P+ +TF
Sbjct: 401 YSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITF 460
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+GLL+AC H+GLV++G CF +MR V+ VEP + HY CM+DIL RAG EA+ + MP
Sbjct: 461 IGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMP 520
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
EP+ +W +LL C+ H + +G+ VA+ L+ LD + + YV +MYA G+++DV+K
Sbjct: 521 FEPNDVIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRK 580
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
R +MK++ ++K +PGCS +E++G V+ F ++ + IL+ LS
Sbjct: 581 VRAMMKQKNLKK-IPGCSWIELEGHVYAFFVQDKSHPQFSGIYSILDSLS 629
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 45/273 (16%)
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
F WN+II + G +EA+ L M +E DK T++ VL AC+ +G + G
Sbjct: 93 FLWNAIIKTYSHGHDPKEAMWLVSLM----LENGAFADKFTLSLVLKACSRVGLVKEGMQ 148
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
+HG L++ D+ + L+ Y KCGC+ RA VF MPK+D++++ +MI + G
Sbjct: 149 IHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGR 208
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
A F + E N +++ L+ A S E G
Sbjct: 209 IDLARVVFDCIPLE--ERNLISWNSLIRGYAQS---EDG--------------------- 242
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
IL LF++ MP E D+ W +++ GC G +E + + + + D +
Sbjct: 243 ----ILVAWQLFAK-------MP-ERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIV 290
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+ + N+ D YAK GR D + + M ER +
Sbjct: 291 S---WANMIDGYAKNGRVDIARSLFDEMPERDV 320
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 273/492 (55%), Gaps = 41/492 (8%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S G L A VF + + +Y MI A + +G+ +KL+++M GISP
Sbjct: 342 SKCGDLDSAKVVFREMSGRSVVSYTSMIAGYA------REGLAGEAVKLFEEMEEEGISP 395
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D T +L C + G V+ + + + D+FV N+++ ++ CG + A ++
Sbjct: 396 DVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELV- 454
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
F M+ ++I SWN++I G+ + A EAL
Sbjct: 455 ------------------------------FSEMRVKDIISWNTVIGGYSKNCYANEALS 484
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
LF + VE+ PD+ T+A VL ACA L A D G+ +HGY+ R+G D + +LV
Sbjct: 485 LFNLLL---VEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DMY KCG + A +F ++ KD ++WT MI+ + ++G+GKEA F +M G+ P+ +
Sbjct: 542 DMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEI 601
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
+FV LL AC+HSGLV++G F +MRH +EP V HYAC++D+L+R G S+A R I +
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIEN 661
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP+ PD +WGALL GC++H +V+L E+VA+ + +L+P N +YV + ++YA+A ++++V
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEV 721
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K+ R + +RG+RK PGCS +E+ G V+ F S E++ L G+ M G+
Sbjct: 722 KRLRKRIGQRGLRKN-PGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGY 780
Query: 556 GQYIRGLSMEAQ 567
+ ++A+
Sbjct: 781 SPLTKYALIDAE 792
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 224/497 (45%), Gaps = 84/497 (16%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A+ VF +K +NI++ A KS + + + + L+K+M+ +G+ D
Sbjct: 143 GDLKEASRVFDQVKIEKALFWNILMNELA-KSGDFSGS-----IGLFKKMMSSGVEMDSY 196
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF + K + G ++G ++K G + V NS+++ ++ V SAR +FDEM
Sbjct: 197 TFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEM 256
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI------------------------ 234
+ RDV+SWN++I GY+ +G + L +F +M I
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 235 ----------FSW-----NSIITGFVQGGRAREALELFQEMQSSSV-------------- 265
FS N+++ + + G A +F+EM SV
Sbjct: 317 AVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREG 376
Query: 266 -------------EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
EE + PD T+ +VL+ CA +D GK VH +++ + + D+ +
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN 436
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VR 371
AL+DMY KCG + A VF EM KD ++W +I ++ N Y EA F + E
Sbjct: 437 ALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFS 496
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
P+ T +L ACA +KGR +MR+ Y + HV + ++D+ ++ G A
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLA- 553
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHG----NVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
RL+ D+ W ++ G MHG + L ++ Q I+ D ++ +V+L
Sbjct: 554 RLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEIS---FVSLLYAC 610
Query: 487 AKAGRFDDVKKTRNLMK 503
+ +G D+ + N+M+
Sbjct: 611 SHSGLVDEGWRFFNIMR 627
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 149/331 (45%), Gaps = 42/331 (12%)
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y GDL A +F ++K WN ++ + G ++ LF++M SS VE D
Sbjct: 139 YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE----MD 194
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
T + V + + L +++ G+ +HGY+ +SG +G +LV Y K V+ A VF
Sbjct: 195 SYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFD 254
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
EM ++D ++W ++I+ + NG ++ F +M G+ + T V + + CA S L+
Sbjct: 255 EMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISL 314
Query: 393 GR--WCF------------------------------VMMRHVYLVEPHVYHYACMIDIL 420
GR CF V+ R + V Y MI
Sbjct: 315 GRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFRE--MSGRSVVSYTSMIAGY 372
Query: 421 SRAGLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
+R GL EA +L M E PDV+ A+L C + ++ G++V +++ + D
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDI 432
Query: 478 FYVN-LCDMYAKAGRFDDVKKTRNLMKERGI 507
F N L DMYAK G + + + M+ + I
Sbjct: 433 FVSNALMDMYAKCGSMREAELVFSEMRVKDI 463
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 119/315 (37%), Gaps = 50/315 (15%)
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
R++ N+ + F + G + A++L V D T+ SVL CA ++
Sbjct: 59 RSVTDANTQLRRFCESGNLKNAVKLLH------VSGKWDIDPRTLCSVLQLCADSKSLKD 112
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
GK V ++R +G D +G+ L MY CG ++ A VF ++ + L W +++ A
Sbjct: 113 GKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAK 172
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
+G + F++M + GV + TF + + + V G H Y+++
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGE-----QLHGYILKSGFG 227
Query: 412 HYACMIDILSRAGLFS---EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV---- 464
+ + L L + ++ R + E DV W +++ G +G E G V
Sbjct: 228 ERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 465 --------------------AQYLIDLDPLNHAFYVNLC------------DMYAKAGRF 492
LI L H F V C DMY+K G
Sbjct: 288 LFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 493 DDVKKTRNLMKERGI 507
D K M R +
Sbjct: 348 DSAKVVFREMSGRSV 362
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 285/518 (55%), Gaps = 53/518 (10%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A+ +F + D+ ++N MI S ++ + + L++YKQM+ GI D T +
Sbjct: 204 ASELFDKLCDRDVISWNSMI------SGYVSNGLTERGLEIYKQMMYLGIDVDLATIISV 257
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
L C +G +V+ +K + N+++ ++ CG + A +F++M R+V
Sbjct: 258 LVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKR------------------------------- 232
VSW +MI GY R G D A+ L ++M+K
Sbjct: 318 VSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDY 377
Query: 233 --------NIFSWNSIITGFVQGGRAREALELFQEMQSSSV---EEMV---KPDKITIAS 278
N+F N+++ + + G A +F M + M+ KPD T+A
Sbjct: 378 IKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMAC 437
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+L ACA L A++ GK +HGY+ R+G D + ALVD+Y KCG + A +F +P KD
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++WT MIS + ++GYG EA TF EM G+ P+ V+F+ +L AC+HSGL+E+G F
Sbjct: 498 LVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 557
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+M++ + +EP + HYACM+D+LSR G S+A I ++P+ PD +WGALL GC+++ ++
Sbjct: 558 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDI 617
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
EL EKVA+ + +L+P N +YV L ++YA+A ++++VK+ R + ++G+RK PGCS +E
Sbjct: 618 ELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKN-PGCSWIE 676
Query: 519 VDGVVHEF-SMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ G V+ F S S +++ +L + + MK G+
Sbjct: 677 IKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGY 714
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 183/400 (45%), Gaps = 47/400 (11%)
Query: 129 LCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFV 188
+C + T+ +L+ C G V+ + V D + ++SL+ CG +
Sbjct: 91 MCQKSELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDL 150
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDL--------------------DVALDLFRR 228
R +FD M ++V WN M+ Y + GD + A +LF +
Sbjct: 151 KEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDK 210
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
+ R++ SWNS+I+G+V G LE++++M ++ D TI SVL CA G
Sbjct: 211 LCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGID----VDLATIISVLVGCANSGT 266
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
+ GK VH +S + + L+DMY KCG ++ A VF++M +++ ++WT+MI+
Sbjct: 267 LSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAG 326
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL--- 405
+ +G A ++ME EGV+ + V +L ACA SG ++ G+ H Y+
Sbjct: 327 YTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDV-----HDYIKAN 381
Query: 406 -VEPHVYHYACMIDILSRAGLFSEAERLIRSM-------------PMEPDVFVWGALLGG 451
+E +++ ++D+ ++ G A + +M ++PD +L
Sbjct: 382 NMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPA 441
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAG 490
C +E G+++ Y++ + N L D+Y K G
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 115/271 (42%), Gaps = 66/271 (24%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS+ A +VFS + D+ ++N MI + PD
Sbjct: 401 GSMDGANSVFSTMVVKDIISWNTMIGE---------------------------LKPDSR 433
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C G ++G +++ G D V N+++ L++ CG + AR+LFD +
Sbjct: 434 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
++D+VSW MI +G+ G EA+ F
Sbjct: 494 PSKDLVSWTVMI-------------------------------SGYGMHGYGNEAIATFN 522
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG--TALVD 316
EM+ + +E PD+++ S+L AC++ G ++ G W Y+ ++ + + + +VD
Sbjct: 523 EMRDAGIE----PDEVSFISILYACSHSGLLEQG-WRFFYIMKNDFNIEPKLEHYACMVD 577
Query: 317 MYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
+ + G + +AY + +P D W A++
Sbjct: 578 LLSRTGNLSKAYEFIETLPIAPDATIWGALL 608
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 117/287 (40%), Gaps = 36/287 (12%)
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG 287
R R + +N+ I F Q G A+EL Q S +E T +SVL CA
Sbjct: 60 RTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK------TYSSVLQLCAGSK 113
Query: 288 AIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMIS 347
++ GK VH ++ + + D V+G LV +Y CG ++ VF M KK+ W M+S
Sbjct: 114 SLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVS 173
Query: 348 VFALNGYGKEAFDTFR---EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
+A G KE+ F+ E EG RP + S L +K
Sbjct: 174 EYAKIGDFKESICLFKIMVEKGIEGKRPE-----------SASELFDK------------ 210
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSM---PMEPDVFVWGALLGGCQMHGNVELG 461
L + V + MI GL + + M ++ D+ ++L GC G + LG
Sbjct: 211 LCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLG 270
Query: 462 EKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRNLMKERGI 507
+ V I + N L DMY+K G D + M ER +
Sbjct: 271 KAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 243/395 (61%), Gaps = 10/395 (2%)
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSAR-MLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
K G V NS++ L+ + G + AR +L+ + DVVSWN M+ GY + GDL A
Sbjct: 106 KCGALAHPVVTNSLLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAR 165
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
++F RM +RN+ SW++++ V+ G EAL +F M + E +PD + + SVL AC
Sbjct: 166 EVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRM----MREEFRPDVVVLVSVLKAC 221
Query: 284 AYLGAIDHGKWVHGYLRRS---GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
A+LGA++ G+WVH YL G ++++ TALVDMY KCGC+E A+ VF + ++D +
Sbjct: 222 AHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVV 281
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
W AMI A+NGYG+ A + FR M +G PN TF+ +L AC H+G V++G+ F M
Sbjct: 282 LWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSM 341
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+ Y ++P HY C+ D+L RAG EAE L+ MPMEP WGAL+ CQMH ++ +
Sbjct: 342 QD-YGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINV 400
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
GE+V + LI+L+P + YV L ++YA GR+++ + R +M++RG +KE G S +E++
Sbjct: 401 GERVGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKET-GLSFIELN 459
Query: 521 GVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G+VHEF + + ++ +L + + ++ G+
Sbjct: 460 GLVHEFISGDTRHPLTRKIYALLEDIERRLQLIGY 494
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/514 (34%), Positives = 275/514 (53%), Gaps = 46/514 (8%)
Query: 43 ELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIM 102
+LK+IH I+ N + L F +S+S +S+A +F+ I+ +++T+N M
Sbjct: 50 KLKQIHAFSIRHGVPPQNPD---FNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTM 106
Query: 103 IRANACKSSETNDTHSGKCLKLYKQM-LCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
IR A + ++L+ QM + I PD TFPFL K K +D +G ++
Sbjct: 107 IRGFA------ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHS 160
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
VV+ G FVQNS++ ++ GF SA +F+ MS RD V+
Sbjct: 161 VVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVA---------------- 204
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
WNS+I GF G EAL L++EM S VE PD T+ S+LS
Sbjct: 205 ---------------WNSVINGFALNGMPNEALTLYREMGSEGVE----PDGFTMVSLLS 245
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
AC LGA+ G+ VH Y+ + GL + AL+D+Y KCG A VF EM ++ ++
Sbjct: 246 ACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVS 305
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
WT++I A+NG G EA F E+E +G++P+ +TFVG+L AC+H G++++G F M+
Sbjct: 306 WTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMK 365
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
Y + P + H+ CM+D+L RAG +A IR+MP+ P+ +W LLG C +HG++ELG
Sbjct: 366 EEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELG 425
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
E + L+ + +V L ++YA R+ DV+ R +M +G++K PG S VE+
Sbjct: 426 EVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKK-TPGYSLVELKN 484
Query: 522 VVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
V+EF M EE +L +++++K G+
Sbjct: 485 RVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGY 518
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 288/514 (56%), Gaps = 15/514 (2%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS--DLYTYNIM 102
K++H I+ S ++ + L+ L A G S A ++F I RS D+ + +
Sbjct: 35 KKLHAVILTSGLASSSPNTFLLNALHHLYA--SCGVTSSARHLFYQIPRSHKDVTDWTTL 92
Query: 103 IRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
+ S + T + +K+M G+ D + + CT+ D +G G
Sbjct: 93 L-----TSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVEDLGMGRQAQGC 147
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
+VK G+ V V N+++++++ CG V R +F EM+ R+VVSW+ ++ G ++ ++
Sbjct: 148 LVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENG 207
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
+F M +RN W +I G+V G +RE L EM + + + +T++S+LSA
Sbjct: 208 RVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEM---VLRFRLGLNFVTLSSILSA 264
Query: 283 CAYLGAIDHGKWVHGY-LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
CA G + G+WVH Y L+ G + +++GTALVDMY KCG ++ A+ VFK +PK++ +A
Sbjct: 265 CAQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVA 324
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
W AM+ A++G GK D F +M E +P+ +TF+ +LSAC+HSGLV++G F +
Sbjct: 325 WNAMLGGLAMHGRGKFVLDIFPKM-IEEAKPDDLTFMAVLSACSHSGLVDQGYHYFRSLE 383
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
Y P + HYACM+DIL RAG EA LI+ MPM P+ V G+LLG C HG ++LG
Sbjct: 384 SEYGTTPKIEHYACMVDILGRAGHLEEAVMLIKKMPMCPNEVVLGSLLGSCNAHGKLQLG 443
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
E++ Q LI +D N ++V L +MY G+ D R ++K +GIRK VPG SS+ V G
Sbjct: 444 ERILQELIQMDGHNTEYHVLLSNMYVLEGKQDKANSLRQILKSKGIRK-VPGVSSIYVGG 502
Query: 522 VVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+H+FS + +E+ LN + + ++ G+
Sbjct: 503 NIHQFSAGDKSHPLTKEIYHALNNMIQRLRLAGY 536
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDC---DVVIGTALVDMYGKCGCVERAYGVFKEM 334
S+L +CA ++ GK +H + SGL + + AL +Y CG A +F ++
Sbjct: 20 SLLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQI 79
Query: 335 PK--KDTLAWTAMISVFALNGYG-KEAFDTFREMEAEGVRPNHVTFVGLLSACAHS---G 388
P+ KD WT +++ +G E F F+EM EGV + V + + C G
Sbjct: 80 PRSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVEDLG 139
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+ + + C V M + V ++++ + GL E R+ M E +V W L
Sbjct: 140 MGRQAQGCLVKMG----LGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMN-ERNVVSWSTL 194
Query: 449 LGGCQMHGNVELGEKV 464
L G VE G V
Sbjct: 195 LEGVVKWEGVENGRVV 210
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 310/590 (52%), Gaps = 87/590 (14%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
++E K +H ++K L + +++ L+ A G + A N+F + D+ ++N
Sbjct: 486 VKECKRVHGYVLK---LGFGSNTAVVNSLI--AAYFKFGGVESAHNLFDELSEPDVVSWN 540
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
MI N C + SG L+++ QML G+ D T +L + +G +++
Sbjct: 541 SMI--NGC----VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALH 594
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACG--------FV-----------------------T 189
G VK ++V N+++ ++ CG FV +
Sbjct: 595 GFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYS 654
Query: 190 SARMLFDEMSN--------------------------RDVVSW-------------NAMI 210
A LFDEM + RDV S+ NA+I
Sbjct: 655 DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALI 714
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
Y + G ++ A +F ++ ++I SWN++I G+ Q EALELF +MQ + K
Sbjct: 715 NMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-----KQFK 769
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD IT+A VL ACA L A+D G+ +HG++ R G D+ + ALVDMY KCG + A +
Sbjct: 770 PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLL 829
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F +PKKD ++WT MI+ + ++G+G EA TF EM G+ P+ +F +L+AC+HSGL+
Sbjct: 830 FDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLL 889
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
+G F MR+ VEP + HYAC++D+L+R G S+A + I SMP++PD +WG LL
Sbjct: 890 NEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLS 949
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
GC++H +V+L EKVA+++ +L+P N +YV L ++YA+A ++++VKK R M++RG K+
Sbjct: 950 GCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGF-KQ 1008
Query: 511 VPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIR 560
PGCS +EV G + F S + + ++L L+ M+N + R
Sbjct: 1009 NPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFR 1058
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 229/490 (46%), Gaps = 88/490 (17%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
E K++ + K +H+ II + + +L +L+F G L +F I +
Sbjct: 381 EKKSLEDGKRVHSVIISN---GISIDEALGAKLVFMYV--NCGDLVQGRKIFDKIMNDKV 435
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+ +N+++ S + + + L+K+M G+ +C TF +LK C L +
Sbjct: 436 FLWNLLM------SEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLK-CFAALGKVKE 488
Query: 157 AS-VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
V+G V+K G + V NS+I+ + G V SA LFDE+S DVVSWN+MI G +
Sbjct: 489 CKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVV 548
Query: 216 SGDLDVALDLFRRM----------------------------------------KKRNIF 235
+G L++F +M + +F
Sbjct: 549 NGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVF 608
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSV-----------------------EEM---- 268
S N+++ + + G A E+F +M +++ +EM
Sbjct: 609 S-NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKG 667
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
V+PD T+ S++ ACA ++D G+ VH Y+ ++G+ ++ + AL++MY KCG VE A
Sbjct: 668 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 727
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF ++P KD ++W MI ++ N EA + F +M+ + +P+ +T +L ACA
Sbjct: 728 LVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLA 786
Query: 389 LVEKGRWCF-VMMRHVYLVEPHVYHYAC-MIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
++KGR ++R Y + HV AC ++D+ ++ GL A+ L +P + D+ W
Sbjct: 787 ALDKGREIHGHILRRGYFSDLHV---ACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWT 842
Query: 447 ALLGGCQMHG 456
++ G MHG
Sbjct: 843 VMIAGYGMHG 852
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 146/326 (44%), Gaps = 46/326 (14%)
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
++ Y+ GDL +F ++ +F WN +++ + + G RE++ LF++MQ
Sbjct: 410 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLG---- 465
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
V + T VL A LG + K VHGY+ + G + + +L+ Y K G VE A+
Sbjct: 466 VVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAH 525
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F E+ + D ++W +MI+ +NG+ + F +M GV + T V +L A A+ G
Sbjct: 526 NLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIG 585
Query: 389 LVEKGR--------WCF---VMMRH-------------------VYLVEPHVYHYACMID 418
+ GR CF V+ + V + + + + I
Sbjct: 586 NLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIA 645
Query: 419 ILSRAGLFSEAERLIRSMP---MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD--- 472
R GL+S+A L M + PD++ +++ C +++ G V Y+I
Sbjct: 646 AYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGS 705
Query: 473 --PLNHAFYVNLCDMYAKAGRFDDVK 496
P+ +A L +MYAK G ++ +
Sbjct: 706 NLPVTNA----LINMYAKCGSVEEAR 727
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N+ I F + G R A+EL +S S E + + SVL CA +++ GK VH
Sbjct: 340 NAKINKFCEMGDLRNAIELLT--KSKSYELGLN----SYCSVLQLCAEKKSLEDGKRVHS 393
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
+ +G+ D +G LV MY CG + + +F ++ W ++S +A G +E
Sbjct: 394 VIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRE 453
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
+ F++M+ GV N TF +L A G V++ + H Y+++ ++
Sbjct: 454 SVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRV-----HGYVLKLGFGSNTAVV 508
Query: 418 DILSRA----GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ L A G A L + EPDV W +++ GC ++G
Sbjct: 509 NSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNG 550
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 287/521 (55%), Gaps = 51/521 (9%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLI--TRLLFFCALSVSGSLSYATNVFSHIKRS 94
+C+N+ ++K++H Q+ + + H LI +LL+ CA L A +F+ ++
Sbjct: 12 KCRNIFQIKQVHAQVTTTGII-----HDLIVANKLLYMCA--KHKDLVTAHLLFNKMEER 64
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
D ++++MI K+ + +C + +++++ G PD + PF++K C + +
Sbjct: 65 DPVSWSVMI-GGFVKNGDYE-----RCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLI 118
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G ++ V+K G+ D FV ++++ ++ CG + +A+
Sbjct: 119 MGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAK---------------------- 156
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
LF RM K+++ + +I G+ + G+ E+ LF +M+ PDK+
Sbjct: 157 ---------QLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFV----PDKV 203
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
+ ++++ACA LGA++ + VH Y+ DV +GTA++DMY KCG ++ + +F M
Sbjct: 204 AMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRM 263
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
+K+ ++W+AMI + +G G+EA + F M G+ PN +TF+ LL AC+H+GLV+ G
Sbjct: 264 EQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGL 323
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F +M Y V P V HY CM+D+L RAG +A RLI +M +E D +W A LG C++
Sbjct: 324 QLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRI 383
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
H V+L EK A+ L+ L N Y+ L ++YA AGR+ DV K RNLM +R ++K +PG
Sbjct: 384 HRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKK-IPGY 442
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ +EVD +++ F + + E+ +L LS+ +++ G+
Sbjct: 443 TWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGY 483
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/525 (33%), Positives = 277/525 (52%), Gaps = 57/525 (10%)
Query: 13 LNSPAKVSPPNKESTKLILRNA--------IDECKNMRELKEIHTQIIKSPCLQTNDHHS 64
+ P+ PN S L++ + +++ ++ IH Q+I+ N H
Sbjct: 16 FSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIR------NGHSQ 69
Query: 65 ---LITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
++ LL C S ++ YA+ +F + ++Y Y +I + +
Sbjct: 70 DPFMVFELLRSC--SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYL------EA 121
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
++LY +ML I PD +LK C +L G V+ + +K G + V+ ++ L
Sbjct: 122 IQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMEL 181
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG + AR +F+EM DVV+ ++ W ++I
Sbjct: 182 YGKCGELGDARRVFEEMPE-DVVA--------------------------KDTVCWTAMI 214
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
GFV+ ALE F+ MQ E V+P++ TI VLSAC+ LGA++ G+WVH Y+R+
Sbjct: 215 DGFVRNEETNRALEAFRGMQG----ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK 270
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
++ ++ +G AL++MY +CG ++ A VF EM +D + + MIS ++NG ++A +
Sbjct: 271 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIEL 330
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR M +RP +VTFVG+L+AC+H GLV+ G F M Y VEP + HY CM+D+L
Sbjct: 331 FRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLG 390
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
R G EA LIR+M M PD + G LL C+MH N+ELGE+VA+ L D + YV
Sbjct: 391 RVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVL 450
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
L +YA +G++ + + R MKE G++KE PGCSS+EV+ +HEF
Sbjct: 451 LSHVYASSGKWKEAAQVRAKMKEAGMQKE-PGCSSIEVNNEIHEF 494
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 298/545 (54%), Gaps = 18/545 (3%)
Query: 11 SLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL 70
SL+NS + P++ + L+ N KE+H+ I++ + +
Sbjct: 94 SLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGL-----EYDIFVVNA 148
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
S L A +F + D ++N M+ + S +C +L++ ML
Sbjct: 149 LITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYE------ECKELFRVMLS 202
Query: 131 T-GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
+ + P+ LT +L+ C + D G V+ V + + DV + N+VI L+ CG +
Sbjct: 203 SVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILD 262
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
AR LF+EM +D +++ +MI GY+ G ++ A+DLFR ++ + +WN++I+G VQ R
Sbjct: 263 YARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNR 322
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
A+++F+ MQS +P+ +T+AS+L ++ + GK +HGY R+ D ++
Sbjct: 323 QEGAVDIFRAMQSHGC----RPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIY 378
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+ TA++D Y KCG + A VF ++ + +AWT++IS +A++G A F EM G
Sbjct: 379 VATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNG 438
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
++P+ VTF +L+ACAHSG +++ F ++ Y ++P V HYACM+ +LSRAG S+A
Sbjct: 439 IQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDA 498
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
I MP+EP VWGALL G + G+VELG+ V L +++P N YV + ++Y+++
Sbjct: 499 VEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQS 558
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
GR+ D R+LMKE ++K +PG S +E G + F + S V E+ +L GL +
Sbjct: 559 GRWKDADTIRDLMKEVRLKK-IPGNSWIETSGGMQRFCXRHS-SVRTPEVYGMLEGLLGL 616
Query: 550 MKNGG 554
+K G
Sbjct: 617 VKEEG 621
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 229/506 (45%), Gaps = 88/506 (17%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
K++H +++ S + N L ++L+ F S SGS+ A NVF I R +++++N +
Sbjct: 23 KQLHARLVLSSVVPDN---FLGSKLISF--YSKSGSIRDAYNVFGKIPRKNIFSWNALFI 77
Query: 105 ANACKSSETNDTHSGKCLKLYKQML---CTGISPDCLTFPFLLKECTKRL-DGLVGASVY 160
+ + T+ LKL+ ++ T + PD T LK + + V+
Sbjct: 78 SYTLHNMHTD------LLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVH 131
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+++ G+ D+FV N++I+ + C + AR++FD M RD VSWNAM+ GY
Sbjct: 132 SFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGY------- 184
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
QGG E ELF+ M SSVE VKP+ +T SVL
Sbjct: 185 ------------------------SQGGSYEECKELFRVML-SSVE--VKPNALTAVSVL 217
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
ACA + G VH ++ S + DV + A++ +Y KCG ++ A +F+EMP+KD +
Sbjct: 218 QACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGI 277
Query: 341 AWTAMISVFALNGYGKEAFDTFRE-------------------------------MEAEG 369
+ +MIS + ++G+ +A D FRE M++ G
Sbjct: 278 TYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHG 337
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
RPN VT +L +H ++ G+ +R+ Y + ++Y +ID ++ G
Sbjct: 338 CRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTY--DRNIYVATAIIDSYAKCGYLHG 395
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHG--NVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
A+ L+ + W +++ +HG NV L + P + + ++
Sbjct: 396 AQ-LVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQP-DQVTFTSVLAAC 453
Query: 487 AKAGRFDDVKKTRN-LMKERGIRKEV 511
A +G D+ K N L+ E GI+ V
Sbjct: 454 AHSGELDEAWKIFNVLLPEYGIQPLV 479
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 149/292 (51%), Gaps = 14/292 (4%)
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
+Q+ LF G AR++ + + + + +I Y +SG + A ++F ++ ++
Sbjct: 9 LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLG-SKLISFYSKSGSIRDAYNVFGKIPRK 67
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH- 291
NIFSWN++ + + L+LF + +S+ + VKPD+ T+ L A A L +
Sbjct: 68 NIFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTD-VKPDRFTVTCSLKALASLFSNSGL 126
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
K VH ++ R GL+ D+ + AL+ Y +C + A +F MP++DT++W AM++ ++
Sbjct: 127 AKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQ 186
Query: 352 NGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH- 409
G +E + FR M + V+PN +T V +L ACA S + F + H ++ E
Sbjct: 187 GGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDL-----TFGIEVHRFVNESQI 241
Query: 410 ---VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
V + +I + ++ G+ A L MP E D + +++ G +HG V
Sbjct: 242 KMDVSLWNAVIGLYAKCGILDYARELFEEMP-EKDGITYCSMISGYMVHGFV 292
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 12/175 (6%)
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
GK +H L S + D +G+ L+ Y K G + AY VF ++P+K+ +W A+ + L
Sbjct: 22 GKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTL 81
Query: 352 NGYGKEAFDTFREM---EAEGVRPNHVTFVGLLSACA----HSGLVEKGRWCFVMMRHVY 404
+ + F + + V+P+ T L A A +SGL ++ F++ R
Sbjct: 82 HNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVH-SFILRRG-- 138
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+E ++ +I SR A + MP E D W A+L G G+ E
Sbjct: 139 -LEYDIFVVNALITFYSRCDELVLARIMFDRMP-ERDTVSWNAMLAGYSQGGSYE 191
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 278/525 (52%), Gaps = 57/525 (10%)
Query: 13 LNSPAKVSPPNKESTKLILRNA--------IDECKNMRELKEIHTQIIKSPCLQTNDHHS 64
+ P+ PN S L++ + K++ ++ IH Q+I+ N H
Sbjct: 9 FSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIR------NGHSQ 62
Query: 65 ---LITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
++ LL C S ++ YA+ +F + ++Y Y +I + +
Sbjct: 63 DPFMVFELLRSC--SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFD------A 114
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
++LY +ML I PD +LK C +L G V+ + +K G+ + V+ ++ L
Sbjct: 115 IQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMEL 174
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG + AR +F+EM DVV+ ++ W ++I
Sbjct: 175 YGKCGELGDARRVFEEMPE-DVVA--------------------------KDTVCWTAMI 207
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
GFV+ ALE F+ MQ E V+P++ TI VLSAC+ LGA++ G+WVH Y+R+
Sbjct: 208 DGFVRNEEMNRALEAFRGMQG----ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK 263
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
++ ++ +G AL++MY +CG ++ A VF EM +D + + MIS ++NG ++A +
Sbjct: 264 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIEL 323
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR M +RP +VTFVG+L+AC+H GLV+ G F M Y VEP + HY CM+D+L
Sbjct: 324 FRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLG 383
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
R G EA LIR+M M PD + G LL C+MH N+ELGE+VA+ L D + YV
Sbjct: 384 RVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVL 443
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
L +YA +G++ + + R MKE G++KE PGCSS+EV+ +HEF
Sbjct: 444 LSHVYASSGKWKEAAQVRAKMKEAGMQKE-PGCSSIEVNNEIHEF 487
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 287/524 (54%), Gaps = 52/524 (9%)
Query: 4 KLQMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHH 63
++ +V+YS L + + P++ + L+L+ A + +N + + I+K D
Sbjct: 86 QMVLVAYSRLRNHGVI--PDRHTFPLLLK-AFSKLRNENPF-QFYAHIVKFGL----DFD 137
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
+ + L A + G + + +F + D+ ++ +I N C + + + L+
Sbjct: 138 AFVQNSLV-SAFAHCGYVDCSRRLFIETAKKDVVSWTALI--NGC----LRNGRAVEALE 190
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVISLF 182
+ +M +G+ D +T +L D G V+G V+ G V DV+V ++++ ++
Sbjct: 191 CFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMY 250
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
CG+ D A+ +F M RN+ SW ++I
Sbjct: 251 SKCGYC-------------------------------DDAVKVFNEMPTRNLVSWGALIA 279
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
G+VQ R +EAL++FQEM + E ++P++ T+ S L+ACA LG++D G+W+H Y+ RS
Sbjct: 280 GYVQCNRYKEALKVFQEM----IIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRS 335
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
L + +GTALVDMY KCGCV+ A VF+++P KD WTAMI+ A+ G + + F
Sbjct: 336 KLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLF 395
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
+M V+PN VTF+G+LSACAH GLV++G F +M Y +EP+V HY CM+D+L R
Sbjct: 396 SQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGR 455
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNL 482
AG EA + I SMPMEP VWGAL GC +H ELGE + +LI L P + Y+ L
Sbjct: 456 AGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILL 515
Query: 483 CDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
++Y++ +++ R LMK +G+ K P CS +EV+GV+HEF
Sbjct: 516 ANLYSRCQKWEAAANVRRLMKGKGVDKS-PACSWIEVNGVIHEF 558
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 139/303 (45%), Gaps = 18/303 (5%)
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG--DLDVALDLFRRMKK 231
+++S++ F CG + + + LRS DL L LF R+
Sbjct: 7 LRHSILCCFHKCGTFDHLNQTTSILITSGLAHHTFFLSDLLRSATKDLGYTLLLFDRLAT 66
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
IF WN+I+ F + + L + +++ V PD+ T +L A + L +
Sbjct: 67 PYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHG----VIPDRHTFPLLLKAFSKLRNENP 122
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
++ + ++ + GLD D + +LV + CG V+ + +F E KKD ++WTA+I+
Sbjct: 123 FQF-YAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLR 181
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP--- 408
NG EA + F EM + GV + VT V +L A A V GRW H + VE
Sbjct: 182 NGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWV-----HGFYVESGRV 236
Query: 409 --HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
VY + ++D+ S+ G +A ++ MP ++ WGAL+ G + KV Q
Sbjct: 237 IWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR-NLVSWGALIAGYVQCNRYKEALKVFQ 295
Query: 467 YLI 469
+I
Sbjct: 296 EMI 298
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 276/470 (58%), Gaps = 12/470 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+GSL + F + ++ ++N MI A + DT + L+ +M G D
Sbjct: 93 AGSLGDSRRFFDEMAGRNVVSWNSMIGGYA----QAGDTR--EACALFGEMRRQGFLGDE 146
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T LL C++ + G V+ ++ G D+ + +++ ++ CG + AR F+
Sbjct: 147 FTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEM 206
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M + VVSW +M+ + G +D A F M +RN SWN++I+ +VQ G+ EAL+L+
Sbjct: 207 MPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLY 266
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
++MQS PD+ T+ VLSAC +G + GK VH Y+R + + D+ + +L+DM
Sbjct: 267 KQMQSHGP----APDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDM 322
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG V+ A +F+EM ++ ++W +I A++G +A FR M P+ +TF
Sbjct: 323 YAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSM-VRNTSPDGITF 381
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V LLS+C+H GL+E G+ F MRHVY V+ V HYACM+D+L R G +A LI+ MP
Sbjct: 382 VALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMP 441
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M+PDV VWGALLG C++HGNV++G++V + L++L+ ++ +V + ++ + +++D+K+
Sbjct: 442 MKPDVVVWGALLGACRIHGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQWEDMKR 501
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
R LMKERG RK++ G SS+E++ +HEF ++ E+ +++ LS
Sbjct: 502 LRKLMKERGTRKDM-GVSSIEINNSIHEFGVEDIRHESSSEIYAVVDQLS 550
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 182/405 (44%), Gaps = 82/405 (20%)
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
+F I D YN + RA C S + L+L++ ML G+ P+ T PF++K
Sbjct: 1 MFDGILDPDRVMYNTITRA-YCNSDCPREA-----LRLHRCMLRRGVLPNEFTLPFVVKA 54
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
CT+ +V+G +K G VFV N
Sbjct: 55 CTRAQAWDNALAVHGVALKLGFVGQVFVAN------------------------------ 84
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
A++ Y +G L + F M RN+ SWNS+I G+ Q G REA LF EM+
Sbjct: 85 -ALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMR----R 139
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG---- 322
+ D+ T+AS+L AC+ G ++ G+ VH + SG D+++G ALVDMY KCG
Sbjct: 140 QGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCM 199
Query: 323 --------------------CVERAYGV-------FKEMPKKDTLAWTAMISVFALNGYG 355
C + +G F MP+++T++W MIS + G
Sbjct: 200 ARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQY 259
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE----PHVY 411
EA D +++M++ G P+ T V +LSAC G + G+ M H+Y+ + P +
Sbjct: 260 HEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGK-----MVHLYIRDNIHNPDIS 314
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
++D+ ++ G A RL R M +V W ++GG MHG
Sbjct: 315 LINSLLDMYAKCGQVDTAIRLFREM-CNRNVVSWNVIIGGLAMHG 358
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 139/317 (43%), Gaps = 47/317 (14%)
Query: 56 CLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETND 115
C + S+++ CA + GS+ A F H+ + ++N MI S
Sbjct: 203 CFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMI------SCYVQR 256
Query: 116 THSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ 175
+ L LYKQM G +PD T +L C + D VG V+ + D+ +
Sbjct: 257 GQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLI 316
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
NS++ ++ CG V +A LF EM NR+VVSWN
Sbjct: 317 NSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNV--------------------------- 349
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
II G GRA +A+ F+ M ++ PD IT ++LS+C++ G ++ G+
Sbjct: 350 ----IIGGLAMHGRALDAITFFRSMVRNT-----SPDGITFVALLSSCSHGGLLETGQHY 400
Query: 296 HGYLRRS-GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG 353
+R + +V +VD+ G+ G +E+A + KEMP K D + W A++ ++G
Sbjct: 401 FESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHG 460
Query: 354 ---YGKEAFDTFREMEA 367
GK+ E+E
Sbjct: 461 NVKIGKQVIKQLLELEG 477
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 11/271 (4%)
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
+N+I + REAL L + M + V P++ T+ V+ AC A D+ VH
Sbjct: 13 YNTITRAYCNSDCPREALRLHRCM----LRRGVLPNEFTLPFVVKACTRAQAWDNALAVH 68
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
G + G V + AL+ Y G + + F EM ++ ++W +MI +A G +
Sbjct: 69 GVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTR 128
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
EA F EM +G + T LL AC+ G +E GR +M V + +
Sbjct: 129 EACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLML-VSGSPVDLILGGAL 187
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP-LN 475
+D+ S+ G A R MP++ V W ++L HG+V+ A+ D P N
Sbjct: 188 VDMYSKCGDLCMARRCFEMMPIK-SVVSWTSMLCAQTKHGSVD----AARCWFDHMPERN 242
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
+ + Y + G++ + M+ G
Sbjct: 243 TVSWNTMISCYVQRGQYHEALDLYKQMQSHG 273
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 282/549 (51%), Gaps = 76/549 (13%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
K+IH ++ SP T ++RLL C + + YA + I+ + ++ ++
Sbjct: 19 KQIHCLVLTSPIFYTR-RDLFLSRLLRRC--TAATQFRYARRLLCQIQTPSIQLWDSLVG 75
Query: 105 ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVV 164
+ + + Y+QM G+ P TFP LLK K D + ++
Sbjct: 76 HFSGRVTLNRRL----SFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDA-NPFQFHAHIL 130
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
KFG D+FV+NS+IS + CG +FD ++DVVSW AMI G++R+ A+
Sbjct: 131 KFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMT 190
Query: 225 LFRRMKKRNIFS-------------------WNSIITGF-VQGGRAR------------- 251
F MK+ + + + I GF ++ GR R
Sbjct: 191 YFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMY 250
Query: 252 -------EALELFQEMQSSSV-----------------------EEMVK----PDKITIA 277
+A ++F EM S +V EEM+K P++ T++
Sbjct: 251 GKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLS 310
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
SVLSACA++GA+ G+ VH Y+ ++ ++ + +GT L+D Y KCGC+E A VF+ + +K
Sbjct: 311 SVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREK 370
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+ WTAMI+ FA +GY A D F M + V PN VTF+ +LSACAH GLVE+GR F
Sbjct: 371 NVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLF 430
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+ M+ + +EP HYACM+D+ R GL EA+ LI MPMEP VWGAL G C +H +
Sbjct: 431 LSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKD 490
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
ELG+ A +I L P + Y L ++Y+++ +DDV + R MK++ + K PGCS +
Sbjct: 491 YELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKS-PGCSWI 549
Query: 518 EVDGVVHEF 526
EV G +HEF
Sbjct: 550 EVKGKLHEF 558
>gi|297745917|emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 289/590 (48%), Gaps = 141/590 (23%)
Query: 12 LLNSPAKVSPPNKESTKLILRN-----------AIDECKNMRELKEIHTQIIKSPCLQTN 60
L++ P S P + L N ID+C ++LK+IH Q++++
Sbjct: 8 LVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLF--F 65
Query: 61 DHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
D S +RL+ ALS SL YA VF I +LYT+N +IRA A S+ +
Sbjct: 66 DPFS-ASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSN------PHQ 118
Query: 121 CLKLYKQMLCTGIS-PDCLTFPFLLKECT--------KRLDGLV-----GASV------- 159
L ++ +ML PD TFPFL+K + K G+V G+ V
Sbjct: 119 SLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLI 178
Query: 160 --YGQVVKFGVCDDVFVQ-----------------------------------------N 176
Y + + G+ VFV N
Sbjct: 179 HFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNSLTLSN 238
Query: 177 SVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFS 236
+++ ++ CG V A+ LFD+M +D+VSW M++GY + G+ D A +F M ++I +
Sbjct: 239 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAA 298
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
WN++I+ + Q G+ +EALELF E+Q S + KPD++T+
Sbjct: 299 WNALISAYEQCGKPKEALELFHELQLS---KTAKPDEVTL-------------------- 335
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
+ G+ + + T+L+DMY KCG +++A VF + +KD W+AMI+ A++G+GK
Sbjct: 336 ----KQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGK 391
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
+A F +M+ + V+PN VTF +L AC+H GLVE+GR F M VY
Sbjct: 392 DAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVY------------ 439
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
MPM P VWGALLG C +H NV L E+ LI+L+P NH
Sbjct: 440 -----------------GKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNH 482
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L ++YAKAG++D V R LM++ G++KE PGCSS+EVDG+VHEF
Sbjct: 483 GAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKE-PGCSSIEVDGIVHEF 531
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 287/522 (54%), Gaps = 17/522 (3%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ +CK+++ LK+IH ++K+ Q+ + + + SYA +F ++++
Sbjct: 14 LRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQR 73
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+++ YN MIR + + Y ++ G + TFP L+K C L
Sbjct: 74 NIFMYNSMIRGYFLSR------FPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYREL 127
Query: 155 --VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
+G V+ V+ G +D FV ++++ F + + AR+LFD+ S +DVV W M+ G
Sbjct: 128 KRIGYLVHAHVIVLGYENDAFVVSALVE-FYSLFDLKVARVLFDKSSGKDVVVWTVMVDG 186
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y + GD++ A LF M +RN+ SW++++ + + RE L LF++MQ ++ P+
Sbjct: 187 YGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNI----VPN 242
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
IASVL+ACA+LGAI G W+H Y +R GLD + ++ TALVDMY KCG +E A VF+
Sbjct: 243 DSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFE 302
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
+ KD AW AMIS FA+ G ++ + F +M A G + TFV +L+AC H+ +VE+
Sbjct: 303 GISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVER 362
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP---MEPDVFVWGALL 449
G F M VY V+P HYAC++D+++RAG+ +AE+ + D VWGA+L
Sbjct: 363 GLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAIL 422
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C+ + N+E+G+++ L L L+ V +++++AGR K+ R E K
Sbjct: 423 SACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSE-ARSK 481
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
++PGCS + VDG V EF + + +L LSK++K
Sbjct: 482 KIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVK 523
>gi|297797141|ref|XP_002866455.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata]
gi|297312290|gb|EFH42714.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata]
Length = 1401
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 264/479 (55%), Gaps = 22/479 (4%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS-------LSYATNVFSH 90
C+ ++ L + H Q I S + ++ + + + + F S+S S +SYAT+V
Sbjct: 428 CRTLKHLHQFHAQFITSGRISSSLNQNSVFANVLFAITSISPSASTSNVVVSYATSVLRF 487
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
I + +N +IR ++ S + + +M + PD T+PF+ K C +
Sbjct: 488 ITNPSTFCFNTIIRIYTL-----HEPLSLSSQRFFVEMRRRSVPPDFHTYPFVFKACAAK 542
Query: 151 LDGLVG--ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
+G + +++ Q ++FG+ D+F N++I + + SA LFDE RDVV++N
Sbjct: 543 KNGDLSLVKTLHCQALRFGLLSDLFTLNTLIRAYSLMAPIGSALQLFDENPQRDVVTYNV 602
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+I G +++ ++ A +LF M R++ SWNS+I G+ Q + REA+ LF EM +
Sbjct: 603 LIDGLVKACEIVRARELFDSMPFRDLVSWNSLIAGYAQMNQCREAISLFDEM----IGLG 658
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
+KPD + I S LSACA G ++ GK +H Y ++ L D + T LVD Y KCG ++ A
Sbjct: 659 LKPDNVAIVSTLSACAQSGDLEKGKAIHDYTKKKRLFIDSFLATGLVDFYAKCGFIDTAM 718
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F K W AMI+ A++G G+ D F +M + G++P+ V+F+ +L C+HSG
Sbjct: 719 EIFHLSSDKTLFTWNAMITGLAMHGNGELTVDYFHKMVSSGIKPDGVSFISVLVGCSHSG 778
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME----PDVFV 444
LV + R F MR +Y V+ + HY CM D+L RAGL EA +I MP + +
Sbjct: 779 LVGEARKLFDQMRSLYDVDREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGKREKLLA 838
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
W LLGGC++HGN+E+ EK A+ + L P + Y + +MYA A R++DV K R +++
Sbjct: 839 WSGLLGGCRIHGNIEVAEKAAKRVKALSPEDGGVYKVMVEMYANAERWEDVVKVREMIE 897
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 268/490 (54%), Gaps = 27/490 (5%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHH--SLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
K+ R +++H + +SP +D H S + + C A VF + ++
Sbjct: 165 KDSRTGEQVHGLVARSP--HADDVHIRSALVDMYAKCERPED-----ARRVFDAMPERNV 217
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
++N +I + + G+ L L+ +M+ G SPD +T ++ C G
Sbjct: 218 VSWNSLI------TCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREG 271
Query: 157 ASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
V+ +VK + DD+ + N+++ ++ CG AR +FD M +R +VS +++ GY +
Sbjct: 272 RQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAK 331
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
S +++ A +F +M ++N+ +WN +I + Q G EA+ LF +++ S+ P T
Sbjct: 332 SANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI----WPTHYT 387
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGL------DCDVVIGTALVDMYGKCGCVERAYG 329
+VL+AC + + G+ H ++ + G + DV +G +LVDMY K G ++
Sbjct: 388 YGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAK 447
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF+ M +D ++W AMI +A NG K+A F M P+ VT +G+LSAC HSGL
Sbjct: 448 VFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGL 507
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V++GR F M + + P HY CM+D+L RAG EAE LI MPMEPD +W +LL
Sbjct: 508 VDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLL 567
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G C++H NVELGE A L +LDP N YV L +MYA+ G++ +V + R MK+RG+ K
Sbjct: 568 GACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSK 627
Query: 510 EVPGCSSVEV 519
+ PGCS +E+
Sbjct: 628 Q-PGCSWIEI 636
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 196/456 (42%), Gaps = 86/456 (18%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
+R+ + + +I P T +++L++ A + G A +F I D +YN
Sbjct: 68 LRDARRVFDEI---PLRNTFSYNALLS------AYARLGRPDEARALFEAIPDPDQCSYN 118
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
++ A A H+ L+ M + +F L C D G V+
Sbjct: 119 AVVAALA----RHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVH 174
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G V + DDV ++++++ ++ C AR +FD M R+VVSWN++I
Sbjct: 175 GLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLI---------- 224
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
T + Q G EAL LF EM ++ PD++T++SV+
Sbjct: 225 ---------------------TCYEQNGPVGEALMLFVEMMAAG----FSPDEVTLSSVM 259
Query: 281 SACAYLGAIDHGKWVHGYLRR-SGLDCDVVIGTALVDMYGKCG------C---------- 323
SACA L A G+ VH ++ + L D+V+ ALVDMY KCG C
Sbjct: 260 SACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSI 319
Query: 324 ---------------VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
VE A VF +M +K+ +AW +I+ +A NG +EA F +++ +
Sbjct: 320 VSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRD 379
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-----RHVYLVEPHVYHYACMIDILSRA 423
+ P H T+ +L+AC + ++ G+ V + R + E V+ ++D+ +
Sbjct: 380 SIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKT 439
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
G + ++ M +V W A++ G +G +
Sbjct: 440 GSIDDGAKVFERMAARDNV-SWNAMIVGYAQNGRAK 474
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 163/330 (49%), Gaps = 8/330 (2%)
Query: 144 LKECTKRLDGLVGA-SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
L + + L GA + + +++K V + F+ N+++S + G + AR +FDE+ R+
Sbjct: 23 LADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRN 82
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR--AREALELFQEM 260
S+NA++ Y R G D A LF + + S+N+++ + GR A +AL M
Sbjct: 83 TFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAM 142
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
+ ++ V + + AS LSACA G+ VHG + RS DV I +ALVDMY K
Sbjct: 143 HA---DDFVL-NAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAK 198
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
C E A VF MP+++ ++W ++I+ + NG EA F EM A G P+ VT +
Sbjct: 199 CERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSV 258
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
+SACA +GR M + + ++D+ ++ G EA + SMP
Sbjct: 259 MSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR- 317
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLID 470
+ ++L G NVE + V +++
Sbjct: 318 SIVSETSILTGYAKSANVEDAQVVFSQMVE 347
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 270/478 (56%), Gaps = 16/478 (3%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SG L A VF + D+ ++N M+ A D + + L YK+ +GI +
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYA------QDGNLHEALWFYKEFRRSGIKFNE 179
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+F LL C K + +GQV+ G +V + S+I + CG + SA+ FDE
Sbjct: 180 FSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M+ +D+ W +I GY + GD++ A LF M ++N SW ++I G+V+ G AL+LF
Sbjct: 240 MTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
++M + VKP++ T +S L A A + ++ HGK +HGY+ R+ + + ++ ++L+DM
Sbjct: 300 RKM----IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDM 355
Query: 318 YGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
Y K G +E + VF+ K D + W MIS A +G G +A +M V+PN T
Sbjct: 356 YSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTT 415
Query: 377 FVGLLSACAHSGLVEKG-RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
V +L+AC+HSGLVE+G RW F M + + P HYAC+ID+L RAG F E R I
Sbjct: 416 LVVILNACSHSGLVEEGLRW-FESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEE 474
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP EPD +W A+LG C++HGN ELG+K A LI LDP + A Y+ L +YA G+++ V
Sbjct: 475 MPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELV 534
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMK--GSPKVVKEELVLILNGLSKIMK 551
+K R +MK+R + KE S +E++ V F++ KEE+ IL+ L+ +++
Sbjct: 535 EKLRGVMKKRRVNKE-KAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIE 591
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 161/336 (47%), Gaps = 47/336 (13%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+ + N +I ++M CG A +FD+M R++ SWN M+ GY++SG L A +F M
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP 140
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+R++ SWN+++ G+ Q G EAL ++E + S +K ++ + A +L+AC +
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSG----IKFNEFSFAGLLTACVKSRQLQ 196
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK------------------ 332
+ HG + +G +VV+ +++D Y KCG +E A F
Sbjct: 197 LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYA 256
Query: 333 -------------EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
EMP+K+ ++WTA+I+ + G G A D FR+M A GV+P TF
Sbjct: 257 KLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSS 316
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRS 435
L A A + G+ H Y+ V P+ + +ID+ S++G +ER+ R
Sbjct: 317 CLCASASIASLRHGKEI-----HGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRI 371
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
+ D W ++ HG LG K + L D+
Sbjct: 372 CDDKHDCVFWNTMISALAQHG---LGHKALRMLDDM 404
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLD-CDVVIGTALVDMYGKC------------- 321
+AS+L C ++ GKW+H +L+ +G + ++ L+ MY KC
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 322 ------------------GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
G + RA VF MP++D ++W M+ +A +G EA ++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
E G++ N +F GLL+AC S ++ R + + +V +ID ++
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLS-NVVLSCSIIDAYAKC 227
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
G A+R M ++ D+ +W L+ G G++E EK+ + + +P++ + L
Sbjct: 228 GQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVS---WTALI 283
Query: 484 DMYAKAG 490
Y + G
Sbjct: 284 AGYVRQG 290
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 279/483 (57%), Gaps = 17/483 (3%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPD 136
SG A + F + D+ ++N MI S + ++ + L ++ +ML + PD
Sbjct: 221 SGQFELAASQFEKMPDRDIVSWNSMI------SGYSQQGYNLEALAIFSKMLNEPSLKPD 274
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
T +L C +G ++ +++ V N++IS++ G V AR++ +
Sbjct: 275 NFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVE 334
Query: 197 E--MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
SN +++++ +++ GY + G++ A ++F +++ R++ +W ++I G+VQ G +AL
Sbjct: 335 HNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDAL 394
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
ELF+ M V E +P+ T+A++LS + L ++HGK +H ++G + AL
Sbjct: 395 ELFRLM----VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNAL 450
Query: 315 VDMYGKCGCVERAYGVFKEMP--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
+ MY K G + A VF ++P KK+ ++WT+MI A +G GKEA + F M + G++P
Sbjct: 451 IAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKP 509
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
+H+T+VG+LSAC H GLVE+GR + MM V+ +EP + HYACMID+ RAGL EA
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF 569
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
I SMP+EPD WG+LL C++H N +L + A+ L+ +DP N Y+ L ++Y+ G++
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
++ +TR LMK+RG+RKE G S + + VH F ++ K+E+ ++ + + +K
Sbjct: 630 ENAAQTRKLMKDRGVRKE-KGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKK 688
Query: 553 GGF 555
GF
Sbjct: 689 MGF 691
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 148/570 (25%), Positives = 252/570 (44%), Gaps = 105/570 (18%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
SP + E IL+ ++ K+ + +H QIIK L + L+ L+ F A +G
Sbjct: 6 SPTSSEFFAHILQTSV-RIKDPFAGRSVHCQIIKK-GLHLGVY--LMNNLMTFYA--KTG 59
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSS---------ETNDTHS------------ 118
SL +A +VF + +++N +I A + + E D
Sbjct: 60 SLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQ 119
Query: 119 ----GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV 174
+ ++ +M+ + P T +L C +G ++ VVK G+ V V
Sbjct: 120 FGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPV 179
Query: 175 QNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
S+++++ CG A+++FD M+ +++ +WNA+I Y++SG ++A F +M R+I
Sbjct: 180 ATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI 239
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
SWNS+I+G+ Q G EAL +F +M + E +KPD T+AS+LSACA L ++ GK
Sbjct: 240 VSWNSMISGYSQQGYNLEALAIFSKMLN---EPSLKPDNFTLASILSACANLEKLNIGKQ 296
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVE----------------------------- 325
+H Y+ R+ + +G AL+ MY K G VE
Sbjct: 297 IHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKL 356
Query: 326 ----RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
A +F ++ +D +AWTAMI + NG +A + FR M EG PN T +L
Sbjct: 357 GNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAML 416
Query: 382 SACAHSGLVEKGRWCFV----------------------------MMRHVYLV---EPHV 410
S + ++E G+ + + V+ + + +
Sbjct: 417 SVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEI 476
Query: 411 YHYACMIDILSRAGLFSEA----ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
+ MI L++ GL EA ER++ S+ M+PD + +L C G VE G K
Sbjct: 477 VSWTSMIMALAQHGLGKEAINLFERML-SVGMKPDHITYVGVLSACTHVGLVEQGRKYYN 535
Query: 467 YLIDLDPLNHAF--YVNLCDMYAKAGRFDD 494
+ ++ + Y + D+Y +AG +
Sbjct: 536 MMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 190/405 (46%), Gaps = 51/405 (12%)
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
F +L+ + D G SV+ Q++K G+ V++ N++++ + G + A +FDEM
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+ SWN +I GY + G+ +V+ L M + SW +II G+ Q G A+ +F +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M + E V P + T+++VLS+CA +D G+ +H ++ + GL V + T+L++MY
Sbjct: 133 M----ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYA 188
Query: 320 KC-------------------------------GCVERAYGVFKEMPKKDTLAWTAMISV 348
KC G E A F++MP +D ++W +MIS
Sbjct: 189 KCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISG 248
Query: 349 FALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
++ GY EA F +M E ++P++ T +LSACA+ + G+ H Y++
Sbjct: 249 YSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI-----HAYILR 303
Query: 408 PHVYHYA----CMIDILSRAGLFSEAERLI--RSMPMEPDVFVWGALLGGCQMHGNVELG 461
+I + +++G E RLI + ++ + +LL G GNV+
Sbjct: 304 AETETSGAVGNALISMYAKSGGV-EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
++ L D D + + + Y + G ++D + LM G
Sbjct: 363 REIFNKLRDRDVVA---WTAMIVGYVQNGLWNDALELFRLMVNEG 404
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 266/503 (52%), Gaps = 49/503 (9%)
Query: 42 RELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNI 101
R +++IH ++ H + LL C + G + YA VF I R DL+ +N
Sbjct: 12 RAVRQIHGHLVVGGIAAARLQH--LRELLLSCVATFRGRMGYARKVFDGIPRPDLFMHNA 69
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
M+R A + G +Y++M + + PD TF +LL+ C G V+
Sbjct: 70 MVRGYAHAGA------PGDAFAVYRRMTEASRLRPDAFTFCYLLRACAGLPGSRAGRQVH 123
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG-------- 212
G VVK G D +V+N++I++F CG + A +L DE DVV+W+A+I G
Sbjct: 124 GAVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEGDVVAWSAVIAGHAARGDMA 183
Query: 213 -----------------------YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
Y + G+++ A +LF R ++++ SWN+IITG+ G
Sbjct: 184 AARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGYAAQGM 243
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL---RRSGLDC 306
+ ALE+F EM+++ PD+ TI S+LS CA G +D G+ +H L RR +
Sbjct: 244 LKHALEVFDEMRAAG----WTPDEATIVSLLSCCANTGLLDAGRMIHHQLHLERRPWI-- 297
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
+V+G ALV MY KCG + A F M D W ++I A +G +++ F++M
Sbjct: 298 SIVVGNALVSMYAKCGDLHTAVEGFNTMKDTDVWTWNSVIGGLAFHGQAEQSVRFFKKML 357
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
+ + PN ++F+ +L AC+H+GLVE G+ F +M+ Y +EP+ HY+C++D+L RAGL
Sbjct: 358 EKRIHPNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSCIVDMLGRAGLL 417
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
EA ++ +M EP VW LLG C+ HGN+ LG+ V + L++++ A YV L +Y
Sbjct: 418 DEAYAIVSNMRCEPSAVVWRTLLGACRTHGNMTLGKLVREKLLNMNEDASADYVLLSGIY 477
Query: 487 AKAGRFDDVKKTRNLMKERGIRK 509
A +G + V+ R M RGIRK
Sbjct: 478 ASSGEWLGVETERRSMDRRGIRK 500
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 193/588 (32%), Positives = 302/588 (51%), Gaps = 87/588 (14%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
K++ + K+ H +++ Q + + LL +L + + YAT VF+ +++
Sbjct: 14 KSLHQAKQCHCLLLRLGLHQD----TYLINLLLRSSLHFAAT-QYATVVFAQTPHPNIFL 68
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL-VGA 157
YN +IR +ND + +Y M G +PD TFPF+LK CT+ VG
Sbjct: 69 YNTLIRGMV-----SNDAFR-DAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGL 122
Query: 158 SVYGQVVKFGVCDDVFV--------------------------QNSVISLFMACGFVTSA 191
S++ V+K G DVFV +N V + CG++ S
Sbjct: 123 SLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESG 182
Query: 192 -------------------------RMLF------DEMSNR-------------DVVSWN 207
R+L+ D S R +V
Sbjct: 183 CFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVAT 242
Query: 208 AMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
+++ Y + G ++ A +F M ++++ W+++I G+ G +EAL++F EMQ E
Sbjct: 243 SLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQ----RE 298
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
V+PD + V SAC+ LGA++ G W G + + V+GTAL+D Y KCG V +A
Sbjct: 299 NVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQA 358
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VFK M +KD + + A+IS A+ G+ AF F +M G++P+ TFVGLL C H+
Sbjct: 359 KEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHA 418
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GLV+ G F M V+ V P + HY CM+D+ +RAGL EA+ LIRSMPME + VWGA
Sbjct: 419 GLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGA 478
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
LLGGC++H + +L E V + LI+L+P N YV L ++Y+ + R+D+ +K R+ + ++G+
Sbjct: 479 LLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGM 538
Query: 508 RKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+K +PGCS VEVDGVVHEF + + + ++ L L K ++ G+
Sbjct: 539 QK-LPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGY 585
>gi|218189594|gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
Length = 589
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 184/532 (34%), Positives = 271/532 (50%), Gaps = 77/532 (14%)
Query: 83 YATNVFSHIKRS---DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
+A +VF+H+ + +N ++R +A S + L + +M ++PD T
Sbjct: 66 HADSVFAHLAEEASRHAFPWNTLVRLHAAASPR-------RSLLYFSRMRRVAVAPDAYT 118
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ------------------------ 175
FP +LK C VG V+G+ V+ G+ D+F +
Sbjct: 119 FPAVLKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHGV 178
Query: 176 ------NSVISLFMACG--------------------------------FVTSARMLFDE 197
NS+++ ++ CG V AR LFD+
Sbjct: 179 RDLVSWNSMVAGYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQ 238
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M +RD+V WN+MI GY R G +D A LF M +RN+ SW+ +I G+V+ G EALE F
Sbjct: 239 MPDRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFF 298
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
Q M S + KPD++ ++ACA LGA++ G+W+H YL + + DVV+ TAL+DM
Sbjct: 299 QRMLSCGI----KPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDM 354
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG ++ A +F+ MPKK + W MI +GYG +A F +ME E + ++
Sbjct: 355 YVKCGRLDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSV 414
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+ +L++C H+GLV +G F M +EP V HY +ID+L RAG +A I +MP
Sbjct: 415 LAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMP 474
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
MEP +WG+LL C+ H VEL E + L L + YV L ++YA G +DDV +
Sbjct: 475 MEPTPELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFR 534
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
R LM G++K + G S +EVDG +HEF GS KEE+ L L LS I
Sbjct: 535 IRKLMSAEGMKKNI-GRSVIEVDGQIHEFVNGGSSHPHKEEIYLTLWNLSNI 585
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/518 (33%), Positives = 286/518 (55%), Gaps = 53/518 (10%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A+ +F + D+ ++N MI S ++ + + L +YKQM+ GI D T +
Sbjct: 66 ASELFDKLCDRDVISWNSMI------SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISV 119
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
L C K +G +V+ +K + N+++ ++ CG + A +F++M R+V
Sbjct: 120 LVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 179
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKR------------------------------- 232
VSW +MI GY R G D A+ L ++M+K
Sbjct: 180 VSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 239
Query: 233 --------NIFSWNSIITGFVQGGRAREALELFQEMQSSSV---EEMV---KPDKITIAS 278
N+F N+++ + + G A +F M + MV KPD T+A
Sbjct: 240 IKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMAC 299
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+L ACA L A++ GK +HGY+ R+G D + ALVD+Y KCG + A +F +P KD
Sbjct: 300 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 359
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++WT MI+ + ++GYG EA TF EM G+ P+ V+F+ +L AC+HSGL+E+G F
Sbjct: 360 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 419
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+M++ + +EP + HYACM+D+LSR G S+A + I ++P+ PD +WGALL GC+++ ++
Sbjct: 420 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDI 479
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
EL EKVA+ + +L+P N +YV L ++YA+A ++++VK+ R + ++G+RK PGCS +E
Sbjct: 480 ELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKN-PGCSWIE 538
Query: 519 VDGVVHEF-SMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ G V+ F S S +++ +L + + MK G+
Sbjct: 539 IKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGY 576
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 165/351 (47%), Gaps = 47/351 (13%)
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL------------------ 219
++S + CG + R +FD M ++V WN M+ Y + GD
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 220 --DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
+ A +LF ++ R++ SWNS+I+G+V G L ++++M ++ D TI
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID----VDLATII 117
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
SVL CA G + GK VH +S + + L+DMY KCG ++ A VF++M ++
Sbjct: 118 SVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER 177
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+ ++WT+MI+ + +G+ A ++ME EGV+ + V +L ACA SG ++ G+
Sbjct: 178 NVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV- 236
Query: 398 VMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSM-------------PMEP 440
H Y+ + +++ ++D+ ++ G A + +M ++P
Sbjct: 237 ----HDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKP 292
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAG 490
D +L C +E G+++ Y++ + N L D+Y K G
Sbjct: 293 DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 343
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKR----SDLYTYNIMIRANA-CKSSE-TNDTHSG 119
IT +L CA S GSL +V +IK S+L+ N ++ A C S E N S
Sbjct: 217 ITSILHACARS--GSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFST 274
Query: 120 KCLK--LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS 177
+K + + + PD T +L C G ++G +++ G D V N+
Sbjct: 275 MVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANA 334
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
++ L++ CG + AR+LFD + ++D+VSW MI GY
Sbjct: 335 LVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGY------------------------ 370
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
G EA+ F EM+ + +E PD+++ S+L AC++ G ++ G W
Sbjct: 371 -------GMHGYGNEAIATFNEMRDAGIE----PDEVSFISILYACSHSGLLEQG-WRFF 418
Query: 298 YLRRSGLDCDVVIG--TALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
Y+ ++ + + + +VD+ + G + +AY + +P D W A++
Sbjct: 419 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 470
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 24/198 (12%)
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
LV Y CG ++ VF M KK+ W M+S +A G KE+ F+ M +G+
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE-- 59
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
G S A S L +K L + V + MI GL +
Sbjct: 60 -----GKRSESA-SELFDK------------LCDRDVISWNSMISGYVSNGLTERGLGIY 101
Query: 434 RSM---PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKA 489
+ M ++ D+ ++L GC G + LG+ V I + N L DMY+K
Sbjct: 102 KQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 161
Query: 490 GRFDDVKKTRNLMKERGI 507
G D + M ER +
Sbjct: 162 GDLDGALRVFEKMGERNV 179
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 241/392 (61%), Gaps = 7/392 (1%)
Query: 163 VVKFG--VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
++K G D F+ ++++S + + AR +FDE++ RD +NA++ Y + G +D
Sbjct: 111 LIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGGLVD 170
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A LF M RN+ SW ++++G+ Q GR EA+E F EM + V+P+++T++SVL
Sbjct: 171 SAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERA---GVQPNELTVSSVL 227
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
ACA +GA++ G+ V Y R GL +V + AL++MY KCG + +A+ VF+ + ++ L
Sbjct: 228 PACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDL 287
Query: 341 -AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+W +MI FA++G +EA F ++ GV+P+ +TFVG++ AC H GLV +G+ F
Sbjct: 288 CSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDS 347
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + ++P + HY CM+D+L RAGL E+ LI SMP+EPD +WGALLG C HGNVE
Sbjct: 348 MEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVE 407
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
L E LI L+P N A V L ++YA +G++D V + L+KE+ +K G S +E+
Sbjct: 408 LAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSA-GYSFIEL 466
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
DG +H+F ++ EE+ LN ++ MK
Sbjct: 467 DGTMHKFLVEDKSHPRFEEVYNTLNSVTMTMK 498
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 284/516 (55%), Gaps = 47/516 (9%)
Query: 44 LKEIHTQIIKSPCLQTND-HHSLITRLLFFCALS-VSGSLSYATNVFSHIKRSDLYTYNI 101
L++IH ++++ ++ +D H ++RL ALS + ++Y+ VFS L N
Sbjct: 27 LRQIHALLLRTSLIRNSDVFHHFLSRL----ALSLIPRDINYSCRVFSQRLNPTLSHCNT 82
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCTGISP-DCLTFPFLLKECTKRLDGLVGASVY 160
MIRA + + +L++ + P + L+ F LK C K D L G ++
Sbjct: 83 MIRAFSLSQTPCEG------FRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIH 136
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G++ G D + +++ L+ C T A +FDE+ RD VS
Sbjct: 137 GKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVS--------------- 181
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
WN + + +++ R R+ L LF +M++ V+ VKPD +T L
Sbjct: 182 ----------------WNVLFSCYLRNKRTRDVLVLFDKMKND-VDGCVKPDGVTCLLAL 224
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
ACA LGA+D GK VH ++ +GL + + LV MY +CG +++AY VF M +++ +
Sbjct: 225 QACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVV 284
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+WTA+IS A+NG+GKEA + F EM G+ P T GLLSAC+HSGLV +G F M
Sbjct: 285 SWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRM 344
Query: 401 RH-VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
R + ++P+++HY C++D+L RA L +A LI+SM M+PD +W LLG C++HG+VE
Sbjct: 345 RSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVE 404
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
LGE+V +LI+L YV L + Y+ G+++ V + R+LMKE+ I + PGCS++E+
Sbjct: 405 LGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTK-PGCSAIEL 463
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G VHEF + KEE+ +L +++ +K G+
Sbjct: 464 QGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGY 499
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 294/530 (55%), Gaps = 20/530 (3%)
Query: 40 NMRELKEIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
++R K++H Q+I++ PC+ +L+ L C G A VF+ + +
Sbjct: 285 SLRWGKQLHAQVIRNLPCIDPYVASALV-ELYAKC-----GCFKEAKGVFNSLHDRNNVA 338
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+ ++I T + ++L+ QM ++ D L+ C R+D +G
Sbjct: 339 WTVLIAGFLQHGCFT------ESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQ 392
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
++ +K G V V NS+IS++ C + SA +F M+ +D+VSW +MI + + G+
Sbjct: 393 LHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGN 452
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+ A + F M +N+ +WN+++ ++Q G + L ++ M S E+ V+PD +T +
Sbjct: 453 IAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLS---EKDVRPDWVTYVT 509
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+ CA LGA G + G + GL D + A++ MY KCG + A VF + KD
Sbjct: 510 LFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKD 569
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++W AMI+ ++ +G GK+A + F ++ G +P+++++V +LS C+HSGLV++G+ F
Sbjct: 570 IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFD 629
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
MM+ V+ + P + H++CM+D+L RAG +EA+ LI MPM+P VWGALL C++HGN
Sbjct: 630 MMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNN 689
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
EL E A+++ +LD + Y+ + +YA AG+ DD + R LM+++GI+K PG S +E
Sbjct: 690 ELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN-PGYSWME 748
Query: 519 VDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSMEAQV 568
V+ VH F + V +++ I L ++M+ Y+R S +++
Sbjct: 749 VNNKVHVFK---ADDVSHPQVIAIRKKLDELMEKIARLGYVRTDSPRSEI 795
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 214/455 (47%), Gaps = 46/455 (10%)
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
H ++IT + G LS A +F + D+ ++N ++ S
Sbjct: 68 HPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLM------SGYFQSQQYLAS 121
Query: 122 LKLYKQMLCTG-ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L+ + M +G SP+ TF + +K C + + + G V KFG DD V +++
Sbjct: 122 LESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVD 181
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
+F+ CG V A LF + + N+M++GY+++ +D AL+LF M +R++ SWN +
Sbjct: 182 MFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMM 241
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
++ Q GR REAL++ +MQS V+ D T S L+ACA L ++ GK +H +
Sbjct: 242 VSALSQSGRVREALDMVVDMQSKG----VRLDSTTYTSSLTACARLSSLRWGKQLHAQVI 297
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
R+ D + +ALV++Y KCGC + A GVF + ++ +AWT +I+ F +G E+ +
Sbjct: 298 RNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVE 357
Query: 361 TFREMEAEGVRPNHVTFVGLLSACA-----------HSGLVEKGRWCFVMMRHV------ 403
F +M AE + + L+S C HS ++ G+ V++ +
Sbjct: 358 LFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYA 417
Query: 404 -------------YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
++ E + + MI S+ G ++A M + +V W A+LG
Sbjct: 418 KCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTK-NVITWNAMLG 476
Query: 451 GCQMHGNVELGEKVAQYLI---DLDPLNHAFYVNL 482
HG E G ++ ++ D+ P + YV L
Sbjct: 477 AYIQHGAEEDGLRMYNVMLSEKDVRP-DWVTYVTL 510
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 193/382 (50%), Gaps = 43/382 (11%)
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR-MLFDE 197
F L+ C R +++G++V G+ VF+QN+++ +++CG + AR +L +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+++ +V++ N M+ GY++ G L A++LF RM R++ SWN++++G+ Q + +LE F
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
M S P+ T A + +C LG + G +++ G D + ALVDM
Sbjct: 126 VSMHRSGDSS---PNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDM 182
Query: 318 YGKCGCVE-------------------------RAYGV------FKEMPKKDTLAWTAMI 346
+ +CG V+ + YGV F MP++D ++W M+
Sbjct: 183 FVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMV 242
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHVYL 405
S + +G +EA D +M+++GVR + T+ L+ACA + G+ ++R++
Sbjct: 243 SALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPC 302
Query: 406 VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG----NVELG 461
++P+V + ++++ ++ G F EA+ + S+ +V W L+ G HG +VEL
Sbjct: 303 IDPYV--ASALVELYAKCGCFKEAKGVFNSLHDRNNV-AWTVLIAGFLQHGCFTESVELF 359
Query: 462 EKVAQYLIDLDPLNHAFYVNLC 483
++ L+ LD A ++ C
Sbjct: 360 NQMRAELMTLDQFALATLISGC 381
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 241/392 (61%), Gaps = 7/392 (1%)
Query: 163 VVKFG--VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
++K G D F+ ++++S + + AR +FDE++ RD +NA++ Y + G +D
Sbjct: 111 LIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGGLVD 170
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A LF M RN+ SW ++++G+ Q GR EA+E F EM + V+P+++T++SVL
Sbjct: 171 SAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERA---GVQPNELTVSSVL 227
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
ACA +GA++ G+ V Y R GL +V + AL++MY KCG + +A+ VF+ + ++ L
Sbjct: 228 PACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDL 287
Query: 341 -AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+W +MI FA++G +EA F ++ GV+P+ +TFVG++ AC H GLV +G+ F
Sbjct: 288 CSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDS 347
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M + ++P + HY CM+D+L RAGL E+ LI SMP+EPD +WGALLG C HGNVE
Sbjct: 348 MEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVE 407
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
L E LI L+P N A V L ++YA +G++D V + L+KE+ +K G S +E+
Sbjct: 408 LAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSA-GYSFIEL 466
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
DG +H+F ++ EE+ LN ++ MK
Sbjct: 467 DGTMHKFLVEDKSHPRFEEVYNTLNSVTMTMK 498
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 287/517 (55%), Gaps = 17/517 (3%)
Query: 11 SLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL 70
SL+NS + P++ + L+ N KE+H+ I++ + +
Sbjct: 94 SLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVHSFILRRGL-----EYDIFVVNA 148
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
S L A +F + D+ ++N M+ + S KC +L++ ML
Sbjct: 149 LITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSYE------KCKELFRVMLS 202
Query: 131 T-GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
+ + P+ LT +L+ C + D + G V+ V + + DV + N+VI L+ CG +
Sbjct: 203 SLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGSLD 262
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
AR LF+EM +D +++ +MI GY+ G ++ A+DLFR ++ + +WN++I+G VQ R
Sbjct: 263 YARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNR 322
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
A+++F+ MQS +P+ +T+AS+L ++ + GK +HGY R+ D ++
Sbjct: 323 QEGAVDIFRAMQSHGC----RPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIY 378
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+ TA++D Y KCG + A VF ++ + +AWT++IS +A++G A F EM G
Sbjct: 379 VATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNG 438
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
++P+ VTF +L+ACAHSG +++ F ++ Y ++P V HYACM+ +LSRAG S+A
Sbjct: 439 IQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDA 498
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
I MP+EP VWGALL G + G+VELG+ V L +++P N YV + ++Y+++
Sbjct: 499 VEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQS 558
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
GR+ D R+LMKE ++K +PG S +E G + F
Sbjct: 559 GRWKDADTIRDLMKEVRLKK-IPGNSWIETSGGMQRF 594
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 230/506 (45%), Gaps = 88/506 (17%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
K++H +++ S + N L ++L+ F S SGS+ A NVF I R +++++N ++
Sbjct: 23 KQLHARLVLSSVVPDN---FLGSKLISF--YSKSGSIRDAYNVFGKIPRKNIFSWNALLI 77
Query: 105 ANACKSSETNDTHSGKCLKLYKQML---CTGISPDCLTFPFLLKECTKRL-DGLVGASVY 160
+ + T+ LKL+ ++ T + PD T LK + + V+
Sbjct: 78 SYTLHNMHTD------LLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVH 131
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
+++ G+ D+FV N++I+ + C + AR++FD M RD+VSWNAM+ GY
Sbjct: 132 SFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGY------- 184
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
QGG + ELF+ M SS+E VKP+ +T SVL
Sbjct: 185 ------------------------SQGGSYEKCKELFRVML-SSLE--VKPNALTAVSVL 217
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
ACA + G VH ++ S + DV + A++ +Y KCG ++ A +F+EM +KD +
Sbjct: 218 QACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAI 277
Query: 341 AWTAMISVFALNGYGKEAFDTFRE-------------------------------MEAEG 369
+ +MIS + ++G+ +A D FRE M++ G
Sbjct: 278 TYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHG 337
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
RPN VT +L +H ++ G+ +R+ Y + ++Y +ID ++ G
Sbjct: 338 CRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTY--DRNIYVATAIIDSYAKCGYLHG 395
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHG--NVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
A+ L+ + W +++ +HG NV L + P + + ++
Sbjct: 396 AQ-LVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQP-DQVTFTSVLAAC 453
Query: 487 AKAGRFDDVKKTRN-LMKERGIRKEV 511
A +G D+ K N L+ E GI+ V
Sbjct: 454 AHSGELDEAWKIFNVLLPEYGIQPLV 479
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 148/292 (50%), Gaps = 14/292 (4%)
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
+Q+ LF G AR++ + + + + +I Y +SG + A ++F ++ ++
Sbjct: 9 LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLG-SKLISFYSKSGSIRDAYNVFGKIPRK 67
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH- 291
NIFSWN+++ + + L+LF + +S+ + VKPD+ T+ L A A L +
Sbjct: 68 NIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTD-VKPDRFTVTCALKALASLFSNSGL 126
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
K VH ++ R GL+ D+ + AL+ Y +C + A +F MP++D ++W AM++ ++
Sbjct: 127 AKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQ 186
Query: 352 NGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH- 409
G ++ + FR M + V+PN +T V +L ACA S + F + H ++ E
Sbjct: 187 GGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDL-----IFGIEVHRFVNESQI 241
Query: 410 ---VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
V + +I + ++ G A L M +E D + +++ G +HG V
Sbjct: 242 KMDVSLWNAVIGLYAKCGSLDYARELFEEM-LEKDAITYCSMISGYMVHGFV 292
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
GK +H L S + D +G+ L+ Y K G + AY VF ++P+K+ +W A++ + L
Sbjct: 22 GKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTL 81
Query: 352 NGYGKEAFDTFREM---EAEGVRPNHVTFVGLLSACA----HSGLVEKGRWCFVMMRHVY 404
+ + F + + V+P+ T L A A +SGL ++ F++ R
Sbjct: 82 HNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVH-SFILRRG-- 138
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+E ++ +I SR A + MP E D+ W A+L G G+ E
Sbjct: 139 -LEYDIFVVNALITFYSRCDELVLARIMFDRMP-ERDIVSWNAMLAGYSQGGSYE 191
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 161/442 (36%), Positives = 260/442 (58%), Gaps = 15/442 (3%)
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDD----VFVQN 176
L L+++M G+ D T+ ++ C L+G V+ ++K + D + V N
Sbjct: 273 ALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGN 332
Query: 177 SVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFS 236
++I+L+ G V AR +F EM +D+++WN ++ GY+ +G ++ A F +M ++N+ +
Sbjct: 333 TLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLT 392
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
W +I+G Q G +AL+LF +M+ E P+ A ++AC+ LGA+++G+ +H
Sbjct: 393 WTVMISGLAQNGFGEQALKLFNQMKLDGYE----PNDYAFAGAITACSVLGALENGRQLH 448
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
+ G D + +G A++ MY +CG VE A +F MP D ++W +MI+ +G+G
Sbjct: 449 AQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGV 508
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
+A + + +M EG+ P+ TF+ +LSAC+H+GLVE+G F M Y + P HYA M
Sbjct: 509 KAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARM 568
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
ID+ RAG FS+A+ +I SMP E +W ALL GC+ HGN++LG + A+ L L P +
Sbjct: 569 IDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHD 628
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVK 536
YV L +MYA GR++DV +TR LM++RG++KE P CS EV+ VH F + + V
Sbjct: 629 GTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKE-PACSWTEVENKVHVFLVDDT---VH 684
Query: 537 EELVLILNGLSKI---MKNGGF 555
E++ I N L K+ MK G+
Sbjct: 685 PEVLSIYNYLEKLNLEMKKIGY 706
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/528 (28%), Positives = 235/528 (44%), Gaps = 108/528 (20%)
Query: 65 LITRLLFFCALSVSGSLSYATNVFSH--IKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
+I R A S G+L A +F+ + D YN MI S ND HS +
Sbjct: 79 VIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITG----YSHMNDGHSA--I 132
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRL-DGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
+L++ M PD TF +L T D ++G VVKFG+ V N+++S+
Sbjct: 133 ELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSV 192
Query: 182 FMACGF---------VTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
++ C + SAR LFDEM R+ W +I GY+R+GDL A ++ M ++
Sbjct: 193 YVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQ 252
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
+WN++I+G++ G +AL LF++M+ V+ D+ T SV+SACA G G
Sbjct: 253 PGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQ----VDESTYTSVISACADGGFFLLG 308
Query: 293 KWVHGYLRRSGLDCD----VVIGTALVDMYGKCGCVERAYGVFKEMPKKDT--------- 339
K VH Y+ ++ L+ D + +G L+ +Y K G V+ A +F EMP KD
Sbjct: 309 KQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSG 368
Query: 340 ----------------------LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
L WT MIS A NG+G++A F +M+ +G PN F
Sbjct: 369 YVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAF 428
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA------CMIDILSRAGLFSEAER 431
G ++AC+ G +E GR H +V H+ H + MI + +R G+ A
Sbjct: 429 AGAITACSVLGALENGR-----QLHAQIV--HLGHDSTLSVGNAMITMYARCGIVEAART 481
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGN----VELGEKVAQ---------YLIDLDPLNHA- 477
+ +MP D W +++ HG+ +EL E++ + +L L +HA
Sbjct: 482 MFLTMPF-VDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAG 540
Query: 478 -----------------------FYVNLCDMYAKAGRFDDVKKTRNLM 502
Y + D++ +AG+F D K + M
Sbjct: 541 LVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSM 588
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 155/354 (43%), Gaps = 63/354 (17%)
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
+V+G V+ G + N +I ++ AR LFDE+ DV++ +I Y G
Sbjct: 34 TVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALG 93
Query: 218 DLDVALDLFRR--MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
+L +A ++F + R+ +N++ITG+ A+ELF+ M+ ++ + PD T
Sbjct: 94 NLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQ----PDDFT 149
Query: 276 IASVLSACAYLGAIDH--GKWVHGYLRRSGLDCDVVIGTALVDMYGKCG---------CV 324
ASVLSA + + G+ +HG + + G++ + AL+ +Y KC +
Sbjct: 150 FASVLSASTLIFYDERQCGQ-MHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLM 208
Query: 325 ERAYGVFKEMPKKDT-------------------------------LAWTAMISVFALNG 353
A +F EMPK++ +AW AMIS + +G
Sbjct: 209 ASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHG 268
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHY 413
++A FR+M GV+ + T+ ++SACA G G+ H Y+++ +
Sbjct: 269 LFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQV-----HAYILKNELNPD 323
Query: 414 --------ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+I + + G A ++ MP++ D+ W LL G G +E
Sbjct: 324 RDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLSGYVNAGRME 376
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 52/268 (19%)
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA---- 350
VHG++ SG I L+D+Y K A +F E+P+ D +A T +I+ ++
Sbjct: 35 VHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGN 94
Query: 351 ------------------------LNGY-----GKEAFDTFREMEAEGVRPNHVTFVGLL 381
+ GY G A + FR M +P+ TF +L
Sbjct: 95 LKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVL 154
Query: 382 SACA------------HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
SA H +V+ G F + + L VY ++S + L + A
Sbjct: 155 SASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALL---SVYVKCASSPLVSSSSLMASA 211
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
+L MP + F+W L+ G +G++ ++ + + + + + Y
Sbjct: 212 RKLFDEMPKRNE-FIWTTLITGYVRNGDLTGAREILDTMTEQPGIA---WNAMISGYLHH 267
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSV 517
G F+D M+ G++ + +SV
Sbjct: 268 GLFEDALTLFRKMRLLGVQVDESTYTSV 295
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F + D ++N MI A H K ++LY+QML GI PD
Sbjct: 474 GIVEAARTMFLTMPFVDPVSWNSMIAALG------QHGHGVKAIELYEQMLKEGILPDRR 527
Query: 139 TFPFLLKECTKRLDGLV--GASVYGQVVK-FGVCDDVFVQNSVISLFMACGFVTSARMLF 195
TF +L C+ GLV G + +++ +G+ +I LF G + A+ +
Sbjct: 528 TFLTVLSACSHA--GLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVI 585
Query: 196 DEMS-NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
D M W A++ G G++D+ ++ ++ K
Sbjct: 586 DSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFK 622
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 240/392 (61%), Gaps = 16/392 (4%)
Query: 175 QNSVISLFMACGFVTSARM-------LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFR 227
Q++++S+ ACG + S + + D +++ NA++ Y + G++ A LF
Sbjct: 259 QSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFD 318
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG 287
M+ +++ WN++I G+ EAL LF+ M + E V P+ +T +VL ACA LG
Sbjct: 319 GMEDKDVILWNTMIGGYCHLSLYEEALVLFEVM----LRENVTPNDVTFLAVLPACASLG 374
Query: 288 AIDHGKWVHGY----LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWT 343
A+D GKWVH Y L+ +G +V + T+++ MY KCGCVE A VF+ M + +W
Sbjct: 375 ALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWN 434
Query: 344 AMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV 403
AMIS A+NG+ + A F EM EG +P+ +TFVG+LSAC +G VE G F M
Sbjct: 435 AMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKD 494
Query: 404 YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEK 463
Y + P + HY CMID+L+R+G F EA+ L+ +M MEPD +WG+LL C++HG VE GE
Sbjct: 495 YGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEY 554
Query: 464 VAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVV 523
VA+ L +L+P N YV L ++YA AGR+DDV K R + ++G++K VPGC+S+E+DGVV
Sbjct: 555 VAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKK-VPGCTSIEIDGVV 613
Query: 524 HEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
HEF + E + +L+ + ++++ GF
Sbjct: 614 HEFLVGDKFHPQSENIFRMLDEVDRLLEETGF 645
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 239/451 (52%), Gaps = 33/451 (7%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLI--TRLLFFCALSVS 78
PP K N + +C ++ LK+IH+ IIKS H++L ++L+ FCALS S
Sbjct: 18 PPYKLLENHPHLNLLAKCPDIPSLKQIHSLIIKSGL-----HNTLFAQSKLIEFCALSPS 72
Query: 79 GSLSYATNVFS--HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPD 136
LSYA ++F H + +++ +N +IRA++ + T+ H L+ QML +G+ P+
Sbjct: 73 RDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLH------LFSQMLHSGLYPN 126
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
TFP L K C K ++ +K + V S+I ++ G + AR++FD
Sbjct: 127 SHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFD 186
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
+ + RD VS+ A+I GY+ G +D A LF + +++ SWN++I G+VQ GR EAL
Sbjct: 187 KSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALAC 246
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F MQ E V P++ T+ SVLSAC +L +++ GKW+ ++R G ++ + ALVD
Sbjct: 247 FTRMQ----EADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVD 302
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG + A +F M KD + W MI + +EA F M E V PN VT
Sbjct: 303 MYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVT 362
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVE--------PHVYHYACMIDILSRAGLFSE 428
F+ +L ACA G ++ G+W H Y+ + +V + +I + ++ G
Sbjct: 363 FLAVLPACASLGALDLGKWV-----HAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEV 417
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
AE++ RSM + W A++ G M+G+ E
Sbjct: 418 AEQVFRSMGSR-SLASWNAMISGLAMNGHAE 447
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 139/358 (38%), Gaps = 80/358 (22%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F ++ D+ +N MI C S + L L++ ML ++P+ +
Sbjct: 308 GEIGTARKLFDGMEDKDVILWNTMI-GGYCHLSLYEEA-----LVLFEVMLRENVTPNDV 361
Query: 139 TFPFLLKECTK----RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
TF +L C L V A + + G ++V + S+I ++ CG V A +
Sbjct: 362 TFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQV 421
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
F M +R + SWNAMI G G A AL
Sbjct: 422 FRSMGSRSLASWNAMISG-------------------------------LAMNGHAERAL 450
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
LF+EM + E +PD IT VLSAC G ++ G H Y S ++ D I L
Sbjct: 451 GLFEEM----INEGFQPDDITFVGVLSACTQAGFVELG---HRYF--SSMNKDYGISPKL 501
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+ YG MI + A +G EA ME E P+
Sbjct: 502 -----------QHYG--------------CMIDLLARSGKFDEAKVLMGNMEME---PDG 533
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
+ LL+AC G VE G +V R L + Y + +I + AG + + ++
Sbjct: 534 AIWGSLLNACRIHGQVEFGE--YVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKI 589
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 279/483 (57%), Gaps = 17/483 (3%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPD 136
SG A + F + D+ ++N MI S + ++ + L ++ +ML + PD
Sbjct: 221 SGQFELAASQFEKMPDRDIVSWNSMI------SGYSQQGYNLEALVIFSKMLNEPSLKPD 274
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
T +L C +G ++ +++ V N++IS++ G V AR++ +
Sbjct: 275 NFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVE 334
Query: 197 E--MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
SN +++++ +++ GY + G++ A ++F +++ R++ +W ++I G+VQ G +AL
Sbjct: 335 HNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDAL 394
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
ELF+ M V E +P+ T+A++LS + L ++HGK +H ++G + AL
Sbjct: 395 ELFRLM----VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNAL 450
Query: 315 VDMYGKCGCVERAYGVFKEMP--KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
+ MY K G + A VF ++P KK+ ++WT+MI A +G GKEA + F M + G++P
Sbjct: 451 IAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKP 509
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
+H+T+VG+LSAC H GLVE+GR + MM V+ +EP + HYACMID+ RAGL EA
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF 569
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
I SMP+EPD WG+LL C++H N +L + A+ L+ +DP N Y+ L ++Y+ G++
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
++ +TR LMK+RG+RKE G S + + VH F ++ K+E+ ++ + + +K
Sbjct: 630 ENAAQTRKLMKDRGVRKE-KGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKK 688
Query: 553 GGF 555
GF
Sbjct: 689 MGF 691
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 148/570 (25%), Positives = 252/570 (44%), Gaps = 105/570 (18%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG 79
SP + E IL+ ++ K+ + +H QIIK L + L+ L+ F A +G
Sbjct: 6 SPTSSEFFAHILQTSV-RIKDPFAGRSVHCQIIKK-GLHLGVY--LMNNLMTFYA--KTG 59
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSS---------ETNDTHS------------ 118
SL +A +VF + +++N +I A + + E D
Sbjct: 60 SLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQ 119
Query: 119 ----GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV 174
+ ++ +M+ + P T +L C +G ++ VVK G+ V V
Sbjct: 120 FGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPV 179
Query: 175 QNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
S+++++ CG A+++FD M+ +++ +WNA+I Y++SG ++A F +M R+I
Sbjct: 180 ATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI 239
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
SWNS+I+G+ Q G EAL +F +M + E +KPD T+AS+LSACA L ++ GK
Sbjct: 240 VSWNSMISGYSQQGYNLEALVIFSKMLN---EPSLKPDNFTLASILSACANLEKLNIGKQ 296
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVE----------------------------- 325
+H Y+ R+ + +G AL+ MY K G VE
Sbjct: 297 IHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKL 356
Query: 326 ----RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
A +F ++ +D +AWTAMI + NG +A + FR M EG PN T +L
Sbjct: 357 GNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAML 416
Query: 382 SACAHSGLVEKGRWCFV----------------------------MMRHVYLV---EPHV 410
S + ++E G+ + + V+ + + +
Sbjct: 417 SVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEI 476
Query: 411 YHYACMIDILSRAGLFSEA----ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
+ MI L++ GL EA ER++ S+ M+PD + +L C G VE G K
Sbjct: 477 VSWTSMIMALAQHGLGKEAINLFERML-SVGMKPDHITYVGVLSACTHVGLVEQGRKYYN 535
Query: 467 YLIDLDPLNHAF--YVNLCDMYAKAGRFDD 494
+ ++ + Y + D+Y +AG +
Sbjct: 536 MMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 190/405 (46%), Gaps = 51/405 (12%)
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
F +L+ + D G SV+ Q++K G+ V++ N++++ + G + A +FDEM
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+ SWN +I GY + G+ +V+ L M + SW +II G+ Q G A+ +F +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M + E V P + T+++VLS+CA +D G+ +H ++ + GL V + T+L++MY
Sbjct: 133 M----ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYA 188
Query: 320 KC-------------------------------GCVERAYGVFKEMPKKDTLAWTAMISV 348
KC G E A F++MP +D ++W +MIS
Sbjct: 189 KCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISG 248
Query: 349 FALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
++ GY EA F +M E ++P++ T +LSACA+ + G+ H Y++
Sbjct: 249 YSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI-----HAYILR 303
Query: 408 PHVYHYA----CMIDILSRAGLFSEAERLI--RSMPMEPDVFVWGALLGGCQMHGNVELG 461
+I + +++G E RLI + ++ + +LL G GNV+
Sbjct: 304 AETETSGAVGNALISMYAKSGGV-EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
++ L D D + + + Y + G ++D + LM G
Sbjct: 363 REIFNKLRDRDVVA---WTAMIVGYVQNGLWNDALELFRLMVNEG 404
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 177/492 (35%), Positives = 261/492 (53%), Gaps = 73/492 (14%)
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVK----------------FG 167
+Y++++ G PD TFP +LK C K + G V+G ++K +
Sbjct: 21 VYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYS 80
Query: 168 VCD---------------DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW------ 206
VC DV VIS ++ G A LF M +
Sbjct: 81 VCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMDVEPNAATFVSVLV 140
Query: 207 ------------------------------NAMIIGYLRSGDLDVALDLFRRMKKRNIFS 236
NA++ Y++ G L A +F + +++I S
Sbjct: 141 ACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVS 200
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
W SII+G VQ +EALELFQ+MQSS +E PD I + SVLSACA LGA+D+G+WVH
Sbjct: 201 WTSIISGLVQCNCPKEALELFQDMQSSGIE----PDGIILTSVLSACARLGALDYGRWVH 256
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
++ R + D+ IGTA+VDMY KCGC+E + +F MP K+ L W A+++ A++G+
Sbjct: 257 EHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAY 316
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR-HVYLVEPHVYHYAC 415
+ + F EM G+RPN VTF+ +L+AC H GLV +GR F M+ Y + P + HY C
Sbjct: 317 KVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGC 376
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
M+D+L RA L EA L ++MPM PDV + GALL C+ +GN EL +++ ++LD +
Sbjct: 377 MVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTELPQEILDRFVELDSHD 436
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
YV L +++A R+DDV + R LMKE+GI+K PG + +E+DG HEF + +
Sbjct: 437 SGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKP-PGSTVIELDGKAHEFIVGDTRHPQ 495
Query: 536 KEELVLILNGLS 547
+ + L+L LS
Sbjct: 496 DKRIRLLLKILS 507
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 130/298 (43%), Gaps = 53/298 (17%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A VF + D+ ++ +I S + L+L++ M +GI PD +
Sbjct: 181 GCLPGAKQVFDELAEKDIVSWTSII------SGLVQCNCPKEALELFQDMQSSGIEPDGI 234
Query: 139 TFPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+L C RL L G V+ + + + D+ + +++ ++ CG + + +F+
Sbjct: 235 ILTSVLSACA-RLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNG 293
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M +++V++WNA+ + G G A + LELF
Sbjct: 294 MPHKNVLTWNAL-------------------------------LNGLAMHGHAYKVLELF 322
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK----WVHGYLRRSGLDCDVVIGTA 313
+EM V ++P+++T ++L+AC + G ++ G+ W+ G ++ L +
Sbjct: 323 EEM----VRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKG--QQYNLPPRLEHYGC 376
Query: 314 LVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG---YGKEAFDTFREMEA 367
+VD+ + ++ A + K MP D A++S NG +E D F E+++
Sbjct: 377 MVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTELPQEILDRFVELDS 434
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 41/202 (20%)
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA-----------HSGLV 390
+ A++S +A+ K AF +R + +G P+ TF +L +CA H ++
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 391 EKGRWCFVMMR----HVYLV------EPHVYHYACMIDILS---------RAGLFSEAER 431
+ G C + + H Y V V+ + D++S RAGLF EA
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV------AQYLIDLDPLNHAFYVNLCDM 485
L M +EP+ + ++L C G + +G+ + + + + L+ N L DM
Sbjct: 122 LFLRMDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSN-----ALMDM 176
Query: 486 YAKAGRFDDVKKTRNLMKERGI 507
Y K G K+ + + E+ I
Sbjct: 177 YVKCGCLPGAKQVFDELAEKDI 198
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 240/412 (58%), Gaps = 28/412 (6%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DVF +++S ++ V AR LFD+M R+ VSWNAM+ GY++ +++A +LF M
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM----------------QSSSVEEMVKP--- 271
RN+ +WN++ITG+ Q G+ EA LF +M QS E ++
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 272 --------DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
++ + +S LS CA + A++ GK +HG L + G + +G AL+ MY KCG
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
+E A +FKEM KD ++W MI+ ++ +G+G+ A F M+ EG++P+ T V +LSA
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+H+GLV+KGR F M Y V P+ HYACM+D+L RAGL +A L+++MP EPD
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+WG LLG ++HGN EL E A + ++P N YV L ++YA +GR+ DV K R M+
Sbjct: 580 IWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMR 639
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++G++K VPG S +E+ H FS+ K+E+ L L MK G+
Sbjct: 640 DKGVKK-VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGY 690
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 144/303 (47%), Gaps = 33/303 (10%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
N +IS ++ G AR LFDEM RD+VSWN MI GY+R+ +L A +LF M +R++
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 236 SWNSIITGFVQGGRAREALELFQEM----------------QSSSVEE--MVKPDKITIA 277
SWN++++G+ Q G +A +F M Q+S +EE M+ + A
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDC-DVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
V C G + K V ++ DVV ++ Y + G ++ A +F E P
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
+D WTAM+S + N +EA + F +M N V++ +L+ +E
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERME----- 329
Query: 397 FVMMRHVYLVEP--HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
M + ++ V P +V + MI ++ G SEA+ L MP + D W A++ G
Sbjct: 330 --MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQ 386
Query: 455 HGN 457
G+
Sbjct: 387 SGH 389
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 154/346 (44%), Gaps = 61/346 (17%)
Query: 55 PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETN 114
PC + +++IT + G +S A N+F + + D ++ MI + +
Sbjct: 339 PCRNVSTWNTMIT------GYAQCGKISEAKNLFDKMPKRDPVSWAAMI------AGYSQ 386
Query: 115 DTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV 174
HS + L+L+ QM G + +F L C + +G ++G++VK G FV
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFV 446
Query: 175 QNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
N+++ ++ CG + A LF EM+ +D+VSWN MI GY R G +VAL F MK+
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR--- 503
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK- 293
E +KPD T+ +VLSAC++ G +D G+
Sbjct: 504 --------------------------------EGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALN 352
+ + + G+ + +VD+ G+ G +E A+ + K MP + D W ++ ++
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 353 G---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
G + A D ME E N +V L + A S GRW
Sbjct: 592 GNTELAETAADKIFAMEPE----NSGMYVLLSNLYASS-----GRW 628
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 10/155 (6%)
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
D D+ + Y + G A VFK MP+ ++++ MIS + NG + A F E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
M + V++ ++ + + K R F +M E V + M+ ++ G
Sbjct: 121 MPERDL----VSWNVMIKGYVRNRNLGKARELFEIM-----PERDVCSWNTMLSGYAQNG 171
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+A + MP + DV W ALL + +E
Sbjct: 172 CVDDARSVFDRMPEKNDV-SWNALLSAYVQNSKME 205
>gi|357118276|ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 508
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 269/512 (52%), Gaps = 47/512 (9%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
+N R LK+IH ++ + LL C S +G + YA VF I DL+
Sbjct: 8 RNPRSLKQIHGNLVVKG---ITSRLQPLRELLLACVASFNGGMDYARKVFDGISHPDLFM 64
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+N+M+R A ++ LY+++ + PD TF +LL+ C G
Sbjct: 65 HNVMVRGYAHSAAPAAA------FVLYRRIEAARLKPDSFTFCYLLRACAGLPGSCAGYQ 118
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTS---------------------------- 190
V+G VVK G D FV+N++I++ CG +
Sbjct: 119 VHGAVVKLGYFKDAFVRNALINMHAKCGDLLVAGTLLDEAGERDVVARSAVIAGHAAKGE 178
Query: 191 ---ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQG 247
AR LFDE ++D+V WN M+ Y + G+++ A L R ++++ SWN+IITG+
Sbjct: 179 LDIARQLFDECQHKDLVCWNVMVAAYAKYGEMEKARGLLDRAPEKDVVSWNTIITGYTAK 238
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC- 306
G +EALE+ EM+ + PD+ TI S+LS CA LG++ G+ +H L G C
Sbjct: 239 GLLKEALEVLDEMRCVG----LMPDEATIVSLLSCCANLGSLGTGRMIHS-LHLEGRPCI 293
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
++ G ALV MY KCG V+ A VF M ++D W ++I A +G +++ F +M
Sbjct: 294 SILPGNALVSMYAKCGDVQAAMEVFSRMKERDVWTWNSIIGGLAFHGQAEQSVQFFNKML 353
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
EG+ PN ++F+ +L AC+H+GLVE G+ F +M + Y +EP+ HY+C++D+L R+GL
Sbjct: 354 DEGLCPNEISFLCVLGACSHAGLVEDGQRYFSLMINRYRIEPNARHYSCIVDMLGRSGLL 413
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
EA ++ SM EP V +W LLG C++HG+V LG+ + L+ ++ YV L +Y
Sbjct: 414 DEAFAIVSSMRCEPAVVIWRTLLGACRIHGDVALGKLARERLLKMNEDASGDYVLLSGIY 473
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
A + V+ R M ERGIRK V G + VE
Sbjct: 474 ASCDEWFGVETVRGSMDERGIRK-VAGYAQVE 504
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/431 (37%), Positives = 252/431 (58%), Gaps = 13/431 (3%)
Query: 133 ISPDCLTFPFLLKECTKRLDGLVG--------ASVYGQVVKFGVCDDVFVQNSVISLFMA 184
++PD +F FL++ T SV+ ++ G D VQ+ +S++ A
Sbjct: 183 LAPDNYSFTFLVRAATALAAAAASALDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAA 242
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
G V +AR F E+++ DVV AM+ G+ D A +LF M +R+ +WN++I G+
Sbjct: 243 AGDVGAARAAFAEIASPDVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGY 302
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
V GR+REAL LF EM+ + ++T+ S L+ACA LGA++ GKWVH G+
Sbjct: 303 VHTGRSREALRLFDEMRHAGAAV----GEVTLVSALTACAQLGALERGKWVHSCAHSRGM 358
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
V +GTAL+DMY KCG V A VF M +++ WT+ +S A+NG G++ F+
Sbjct: 359 RLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKR 418
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
ME+ GV PN VTFV +L C+ +GLV++GR CF M+ + ++P + HY CM+D+ RAG
Sbjct: 419 MESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAG 478
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
+A I MP+EP VWGALL ++H NVELG+ L+ ++ N A +V L +
Sbjct: 479 RLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSN 538
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
+YA + + V RN+MK +G++K VPGCS++EV G VHEF + G +E+ ++L
Sbjct: 539 IYADSQNWKGVSNVRNMMKAKGVKK-VPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLA 597
Query: 545 GLSKIMKNGGF 555
+++ ++ G+
Sbjct: 598 EMNQRLRLQGY 608
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 270/481 (56%), Gaps = 15/481 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDC 137
G + A F + D+ T+N MI S + + L ++ +ML +SPD
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMI------SGYNQRGYDLRALDMFSKMLRDSMLSPDR 279
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T +L C +G ++ +V G V N++IS++ CG V +AR L ++
Sbjct: 280 FTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 198 MSNRD--VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
+D + + A++ GY++ GD++ A ++F +K R++ +W ++I G+ Q G EA+
Sbjct: 340 RGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAIN 399
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
LF+ M V E +P+ T+A++LS + L ++ HGK +HG +SG V + AL+
Sbjct: 400 LFRSM----VGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 316 DMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
MY K G + A F + ++DT++WT+MI A +G+ +EA + F M EG+RP+H
Sbjct: 456 TMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+T+VG+ SAC H+GLV +GR F MM+ V + P + HYACM+D+ RAGL EA+ I
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
MP+EPDV WG+LL C+++ N++LG+ A+ L+ L+P N Y L ++Y+ G++++
Sbjct: 576 KMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEE 635
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
K R MK+ ++KE G S +EV VH F ++ K E+ + + + +K G
Sbjct: 636 AAKIRKSMKDGRVKKE-QGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMG 694
Query: 555 F 555
+
Sbjct: 695 Y 695
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 222/482 (46%), Gaps = 54/482 (11%)
Query: 72 FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
A + G + + F + + D ++ MI N K +++ +M+
Sbjct: 87 LSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMI------VGYKNIGQYHKAIRIMGEMMRE 140
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
GI P T +L G V+ +VK G+ +V V NS+++++ CG A
Sbjct: 141 GIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
+++FD M +D+ SWNAMI +++ G +D+A+ F +M +R+I +WNS+I+G+ Q G
Sbjct: 201 KVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDL 260
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
AL++F +M S M+ PD+ T+ASVLSACA L + G+ +H ++ +G D ++
Sbjct: 261 RALDMFSKMLRDS---MLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVL 317
Query: 312 TALVDMYGKCGCVE---------------------------------RAYGVFKEMPKKD 338
AL+ MY +CG VE A +F + +D
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRD 377
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF- 397
+AWTAMI + +G EA + FR M E RPN T +LS + + G+
Sbjct: 378 VVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHG 437
Query: 398 --VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
V +Y V +I + ++AG + A R + E D W +++ H
Sbjct: 438 SAVKSGEIYSVSVS----NALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Query: 456 GNVELGEKVAQYLI--DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
G+ E ++ + ++ L P +H YV + AG + ++ ++MK+ + K +P
Sbjct: 494 GHAEEALELFETMLMEGLRP-DHITYVGVFSACTHAGLVNQGRQYFDMMKD--VDKIIPT 550
Query: 514 CS 515
S
Sbjct: 551 LS 552
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 181/395 (45%), Gaps = 77/395 (19%)
Query: 134 SPDCLTFPFLLKECTKRLDGLVGAS--------VYGQVVKFGVCDDVFVQNSVISLFMAC 185
+P L+ LL+ CT L V S V+ +V+K G+ V++ N++++++
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKT 62
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
G+ AR LFDEM R SWN ++ Y + GD+D + + F R+ +R+ SW ++I G+
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYK 122
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
G+ +A+ + EM + E ++P + T+ +VL++ A ++ GK VH ++ + GL
Sbjct: 123 NIGQYHKAIRIMGEM----MREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLR 178
Query: 306 CDVVIGTALVDMYGKC-------------------------------GCVERAYGVFKEM 334
+V + +L++MY KC G ++ A F++M
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQM 238
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACA-------- 385
++D + W +MIS + GY A D F +M + + P+ T +LSACA
Sbjct: 239 AERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIG 298
Query: 386 ---HSGLVEKG---------------RWCFVMMRHVYLVEPH------VYHYACMIDILS 421
HS +V G C + L+E + + ++D
Sbjct: 299 EQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ G +EA+ + S+ + DV W A++ G + HG
Sbjct: 359 KLGDMNEAKNIFDSLK-DRDVVAWTAMIVGYEQHG 392
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/477 (34%), Positives = 265/477 (55%), Gaps = 42/477 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F ++ ++ +++ MI A K L L++ ML +G+ PD +
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHG------QGRKALDLFRMMLSSGMLPDKI 233
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T LL C+ + +G ++ V KFG+ D FV +++ ++ C + AR LFD
Sbjct: 234 TLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFD-- 291
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+M +R++ +W +I G+ + G A E+L LF
Sbjct: 292 -----------------------------KMPERDLVTWTVMIGGYAECGNANESLVLFD 322
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+M+ EE V PDK+ + +V+ ACA LGA+ + + Y++R DV++GTA++DM+
Sbjct: 323 KMR----EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMH 378
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCGCVE A +F M +K+ ++W+AMI+ + +G G++A D F M G+ PN +T V
Sbjct: 379 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLV 438
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
LL AC+H+GLVE+G F +M Y V V HY C++D+L RAG EA +LI SM +
Sbjct: 439 SLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTV 498
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
E D +WGA LG C+ H +V L EK A L++L P N Y+ L ++YA AGR++DV KT
Sbjct: 499 EKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKT 558
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R+LM +R ++K +PG + +EVD H+FS+ + +E+ +L L ++ G+
Sbjct: 559 RDLMSQRRLKK-IPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGY 614
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 181/340 (53%), Gaps = 43/340 (12%)
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
C +++++ G PD T PF+++ C + +G ++ V KFG+ D FV +++
Sbjct: 14 CFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVD 73
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSI 240
+++ C + AR LFD +M++R++ +W +
Sbjct: 74 MYVKCREIEDARFLFD-------------------------------KMQERDLVTWTVM 102
Query: 241 ITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLR 300
I G+ + G+A E+L LF++M+ EE V PDK+ + +V+ ACA LGA+ + + Y++
Sbjct: 103 IGGYAECGKANESLVLFEKMR----EEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ 158
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
R DV++GTA++DMY KCGCVE A +F M +K+ ++W+AMI+ + +G G++A D
Sbjct: 159 RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 218
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH-VYLVEPHVYHYAC--MI 417
FR M + G+ P+ +T LL AC+ ++ GR ++ H VY + H+ C ++
Sbjct: 219 LFRMMLSSGMLPDKITLASLLYACSDLKNLQMGR----LIHHIVYKFGLDLDHFVCAALV 274
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
D+ + +A L MP E D+ W ++GG GN
Sbjct: 275 DMYGKCREIEDARFLFDKMP-ERDLVTWTVMIGGYAECGN 313
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 209/443 (47%), Gaps = 63/443 (14%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS--- 78
P+ + ++R A + KN++ + IH + K DH F CA V
Sbjct: 28 PDNYTLPFVIR-ACRDLKNLQMGRLIHHIVYKFGL--DLDH--------FVCAALVDMYV 76
Query: 79 --GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPD 136
+ A +F ++ DL T+ +MI A + + N++ L L+++M G+ PD
Sbjct: 77 KCREIEDARFLFDKMQERDLVTWTVMIGGYA-ECGKANES-----LVLFEKMREEGVVPD 130
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
+ ++ C K G + K + DD ++Q L
Sbjct: 131 KVAMVTVVFACAK----------LGAMHKARIIDD-YIQRKKFQL--------------- 164
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
DV+ AMI Y + G ++ A ++F RM+++N+ SW+++I + G+ R+AL+L
Sbjct: 165 -----DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDL 219
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F+ M SS + PDKIT+AS+L AC+ L + G+ +H + + GLD D + ALVD
Sbjct: 220 FRMMLSSGM----LPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVD 275
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MYGKC +E A +F +MP++D + WT MI +A G E+ F +M EGV P+ V
Sbjct: 276 MYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVA 335
Query: 377 FVGLLSACAHSGLVEKGRWC--FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
V ++ ACA G + K R ++ + L V MID+ ++ G A +
Sbjct: 336 MVTVVFACAKLGAMHKARTIDDYIQRKKFQL---DVILGTAMIDMHAKCGCVESAREIFD 392
Query: 435 SMPMEPDVFVWGALLGGCQMHGN 457
M E +V W A++ HG
Sbjct: 393 RME-EKNVISWSAMIAAYGYHGQ 414
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 129/303 (42%), Gaps = 40/303 (13%)
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
++ GF + G F+E+ +PD T+ V+ AC L + G+ +H +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGA----RPDNYTLPFVIRACRDLKNLQMGRLIHHIV 56
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
+ GLD D + ALVDMY KC +E A +F +M ++D + WT MI +A G E+
Sbjct: 57 YKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESL 116
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW------------------------ 395
F +M EGV P+ V V ++ ACA G + K R
Sbjct: 117 VLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMY 176
Query: 396 ----CFVMMRHVY--LVEPHVYHYACMIDILSRAGLFSEAERLIRSM---PMEPDVFVWG 446
C R ++ + E +V ++ MI G +A L R M M PD
Sbjct: 177 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLA 236
Query: 447 ALLGGCQMHGNVELGEKVAQ--YLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
+LL C N+++G + Y LD L+H L DMY K +D + + M E
Sbjct: 237 SLLYACSDLKNLQMGRLIHHIVYKFGLD-LDHFVCAALVDMYGKCREIEDARFLFDKMPE 295
Query: 505 RGI 507
R +
Sbjct: 296 RDL 298
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/349 (43%), Positives = 218/349 (62%), Gaps = 5/349 (1%)
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
NA++ Y + G D A D+F +M +++ SW S++TG V G EAL LF EM+ +
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
PD+I IA+VLSACA L ++ GK VH +SGL + + +LV MY KCGC+E
Sbjct: 66 ----PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED 121
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A VF M +D + WTA+I +A NG G+E+ + + +M A GV+P+ +TF+GLL AC+H
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSH 181
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
+GLVE GR F M VY ++P HYACMID+L R+G EA+ L+ M ++PD VW
Sbjct: 182 AGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALL C++HGNVELGE+ A L +L+P N YV L ++Y+ AG++++ KTR LMK RG
Sbjct: 242 ALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRG 301
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ KE PGCS +E+ VH F + E+ ++ + ++K G+
Sbjct: 302 VSKE-PGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGY 349
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 155/364 (42%), Gaps = 84/364 (23%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG---KCLKLYKQMLCTGISP 135
G YA +VF + D+ ++ ++ T H+G + L+L+ +M GI P
Sbjct: 16 GYFDYAFDVFEKMTDKDVISWTSLV---------TGCVHNGSYEEALRLFCEMRIMGIHP 66
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D + +L C + G V+ +K G+ + V NS++S++ CG + A +F
Sbjct: 67 DQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVF 126
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D M +DV++W A+I+GY Q GR RE+L
Sbjct: 127 DSMEIQDVITWTALIVGY-------------------------------AQNGRGRESLN 155
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
+ +M +S VKPD IT +L AC++ G ++HG+ Y +
Sbjct: 156 FYNBMIASG----VKPDFITFIGLLFACSHAGLVEHGR---SYFQS-------------- 194
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
+E YG+ K P+ + MI + +G EA + +M V+P+
Sbjct: 195 --------MEEVYGI-KPGPEH----YACMIDLLGRSGKLMEAKELLNQM---AVQPDAT 238
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP-HVYHYACMIDILSRAGLFSEAERLIR 434
+ LL+AC G VE G +++ +EP + Y + ++ S AG + EA + R
Sbjct: 239 VWKALLAACRVHGNVELGERA---ANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRR 295
Query: 435 SMPM 438
M +
Sbjct: 296 LMKL 299
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
++ ALVDMY K G + A+ VF++M KD ++WT++++ NG +EA F EM
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
G+ P+ + +LSACA ++E G+ L + ++ + ++ G +
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNS-LVSMYAKCGCIED 121
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHG 456
A ++ SM ++ DV W AL+ G +G
Sbjct: 122 ANKVFDSMEIQ-DVITWTALIVGYAQNG 148
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/515 (35%), Positives = 285/515 (55%), Gaps = 31/515 (6%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
+RE +++H + K+ QT++ + T L+ A G L A VF + D YN
Sbjct: 120 LREGEQVHVHVFKNG-FQTDER--IATTLVDLYARC--GRLDDARRVFDRLLVKDAQLYN 174
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
MI A +G+ ++L +++ + T ++ + R D V+
Sbjct: 175 TMIAAY---------MEAGE-VELAEELFEVMPERNTHTLMEMVGGYSARGDMDSAKHVF 224
Query: 161 ---GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI-IGYLRS 216
VV +C ++IS F G V AR +FD M RDV +WN MI + Y +
Sbjct: 225 EMANGVVNMVLC------TAMISGFAKTGSVDDARSVFDGMRQRDVATWNVMIGVMYAKC 278
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G ++ A +F M +RN+ W S+I+G+ Q G+ ++A++LF++MQ S V K D TI
Sbjct: 279 GLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGV----KADDATI 334
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
A+V+S+C +GA+D G++VH Y GL + + +L+DMY KCG +++A+ +F+ + K
Sbjct: 335 ATVVSSCGQMGALDLGRYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVK 394
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLVEKGRW 395
+D +WT MI FA+NG EA D F +ME EG V PN +TF+G+L++C+H GLVE+G
Sbjct: 395 RDDFSWTVMIMGFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYH 454
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M VY + P + HY CM+D+L RA L +EAE+ I MP+ PDV +W +LL C+
Sbjct: 455 HFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLLFACRAR 514
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
G V L E VA+ + +L+P V L ++YA R+ DV K R M + K PGCS
Sbjct: 515 GEVGLAEYVAERVEELEPSRCGGNVLLSNVYATTSRWVDVNKVRTGMGRSRVSKR-PGCS 573
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
+EV+G HEF + E + IL G+++++
Sbjct: 574 VIEVNGCAHEFLSGDETHLETEAIYNILLGINELL 608
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 168/338 (49%), Gaps = 16/338 (4%)
Query: 122 LKLYKQML--CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ LY QM C G+ P T +LK +R G V+ V K G D + +++
Sbjct: 87 VALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDERIATTLV 146
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
L+ CG + AR +FD + +D +N MI Y+ +G++++A +LF M +RN +
Sbjct: 147 DLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEVMPERNTHTLME 206
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV-HGY 298
++ G+ G A +F EM + V + + +++S A G++D + V G
Sbjct: 207 MVGGYSARGDMDSAKHVF-EMANGVV------NMVLCTAMISGFAKTGSVDDARSVFDGM 259
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
+R +V+IG MY KCG VE A VF MP+++ + WT+MIS + G K+A
Sbjct: 260 RQRDVATWNVMIGV----MYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQA 315
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
FR+M+ GV+ + T ++S+C G ++ GR+ V+ + + +ID
Sbjct: 316 VKLFRDMQISGVKADDATIATVVSSCGQMGALDLGRYVHAYC-DVHGLGKGISVKNSLID 374
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ S+ G +A + R + ++ D F W ++ G ++G
Sbjct: 375 MYSKCGDIKKAHEIFRGL-VKRDDFSWTVMIMGFAVNG 411
>gi|326492712|dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506700|dbj|BAJ91391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 269/494 (54%), Gaps = 20/494 (4%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+C M L+++H ++KS + +R + FCA +YA + + R +
Sbjct: 41 QCATMAHLRQLHAALVKS---GLSKDPIAASRAVAFCA-GEGRDAAYAARIVRYHPRPNS 96
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+ +N IRA ++ + L+ ML + P+ TFP L + G
Sbjct: 97 FMWNTAIRA------LSDGPGPDAAVALFVDMLRSPTPPERRTFPSLFAAYARLGRADDG 150
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
A+++G V+K G+ D + +N+ I+++ + G A LF + DVV+ N+ I+ R+
Sbjct: 151 AALHGMVLKLGLAGDAYTRNTTIAMYASSGRADEALALFGQCQVFDVVACNSAIVALSRA 210
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G +D A +F M R + +W+++++ + + R +A++LF MQ VE P+ +
Sbjct: 211 GRVDEARAVFDGMPSRTVATWSAMVSAYSRAARFHDAVDLFSAMQVDGVE----PNANVL 266
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
SVL CA LGA++ G WVH Y+ + + + ++ ALVDMY KCG + +A VF + +
Sbjct: 267 VSVLGCCASLGALEQGAWVHAYIDKQDVGMNALVVIALVDMYCKCGSIHKARQVF-DTSR 325
Query: 337 KDTLA----WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
LA W AM+ A +G +EA F E+E+ G+RP++VTF+ +L A HSG+ ++
Sbjct: 326 SQGLAKLSSWNAMMLGLAAHGQCQEALALFSELESYGLRPDNVTFIAMLMAYGHSGMADE 385
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
+ F M Y V P + HY C++D L+RAG EAE IR+MPM+PD +WGALL GC
Sbjct: 386 AKALFASMAREYGVTPGIEHYGCLVDALARAGRLREAEDTIRAMPMKPDAAIWGALLSGC 445
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
++HG+ E G + A+ ++ DP + YV + A+ G R M+E G+ K VP
Sbjct: 446 RLHGDAEAGARAARGAVECDPRDSGAYVLAASVLARDGEVGRGLGVRGKMREEGVAK-VP 504
Query: 513 GCSSVEVDGVVHEF 526
GCS +EVDGVVHEF
Sbjct: 505 GCSMIEVDGVVHEF 518
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 243/412 (58%), Gaps = 29/412 (7%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DVF +++S F+ G + A +F+EM ++ VSWNAMI GY++S ++ A +LF +M
Sbjct: 276 DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMP 335
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM----------------QSSSVEEMV----- 269
RN SWN+++TG+ Q G +A LF EM QS EE +
Sbjct: 336 SRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIK 395
Query: 270 -KPD-----KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
K D + +A LS+CA + A++ GK +HG L ++G + G AL+ MYGKCG
Sbjct: 396 MKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGS 455
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
+E A+ VF+++ +KD ++W MI+ +A +G+GKEA F M+ ++P+ VT VG+LSA
Sbjct: 456 IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSA 514
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+H+GLV+KG F M Y + + HY CMID+L RAG EA L++SMP PD
Sbjct: 515 CSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAA 574
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
WGALLG ++HG+ ELGEK A+ + +++P N YV L ++YA +GR+ +V++ R+ M+
Sbjct: 575 TWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMR 634
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++G++K VPG S VE+ H F++ E + L L +K GF
Sbjct: 635 DKGVKK-VPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGF 685
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 45/311 (14%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
N++IS +++ AR +F++M +RD++SWN M+ GY+++G+L A LF +M ++++
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK-- 293
SWN++++GF Q G EA ++F +M +VK ++I+ +LSA G I+ +
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQM-------LVK-NEISWNGLLSAYVQNGRIEDARRL 206
Query: 294 ------W--------VHGYLRRSGLDC-----------DVVIGTALVDMYGKCGCVERAY 328
W + GY+R+ LD D + ++ Y + G + A
Sbjct: 207 FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F+E+P +D AWTAM+S F NG EA F EM + N V++ +++ S
Sbjct: 267 RLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQ 322
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+EK R F M + + M+ ++ G +A+ L MP + D W A+
Sbjct: 323 QIEKARELFDQM-----PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAM 376
Query: 449 LGGCQMHGNVE 459
+ G G E
Sbjct: 377 ISGYAQSGQSE 387
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 219/545 (40%), Gaps = 110/545 (20%)
Query: 43 ELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIM 102
E K + I+ S ++ N S R G A +VF+ ++R TYN M
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMR---------KGQCESALSVFNGMRRRSTVTYNAM 97
Query: 103 IRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
I S ++ K++++M D +++ +L K + +++ Q
Sbjct: 98 I------SGYLSNNKFDCARKVFEKM----PDRDLISWNVMLSGYVKNGNLSAARALFNQ 147
Query: 163 -----VVKF-----GVCDDVFVQ-----------------NSVISLFMACGFVTSARMLF 195
VV + G + FV+ N ++S ++ G + AR LF
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLF 207
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D + ++VSWN ++ GY+R LD A LF RM R+ SWN +ITG+ Q G EA
Sbjct: 208 DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARR 267
Query: 256 LFQEMQSSSV-----------------------EEMVKPDKITIASVLSACAYLGAIDHG 292
LF+E+ V EEM + ++++ ++++ I+
Sbjct: 268 LFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKA 327
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+ + + + +V Y +CG +++A +F EMP++D ++W AMIS +A +
Sbjct: 328 RELFDQMPSR----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQS 383
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA-----------HSGLVEKGRWCFVMMR 401
G +EA F +M+ +G N LS+CA H LV+ G +
Sbjct: 384 GQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG 443
Query: 402 HVYL-------------------VEPHVYHYACMIDILSRAGLFSEAERLIRSMPM--EP 440
+ L E + + MI +R G EA L SM M +P
Sbjct: 444 NALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKP 503
Query: 441 DVFVWGALLGGCQMHGNVELGEKV--AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
D +L C G V+ G + + Y N Y + D+ +AGR D+
Sbjct: 504 DDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA--- 560
Query: 499 RNLMK 503
NLMK
Sbjct: 561 LNLMK 565
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 180/408 (44%), Gaps = 70/408 (17%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+ + + + +E+ Q+ P T+ ++++T + G++ A +F + + D
Sbjct: 320 QSQQIEKARELFDQM---PSRNTSSWNTMVT------GYAQCGNIDQAKILFDEMPQRDC 370
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
++ MI S S + L L+ +M G + L C + +G
Sbjct: 371 ISWAAMI------SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELG 424
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++G++VK G N++++++ CG + A +F++++ +D+VSWN MI GY R
Sbjct: 425 KQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARH 484
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G +EAL LF+ M+ + +KPD +T+
Sbjct: 485 -------------------------------GFGKEALALFESMKMT-----IKPDDVTL 508
Query: 277 ASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
VLSAC++ G +D G ++ + + G+ + T ++D+ G+ G ++ A + K MP
Sbjct: 509 VGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMP 568
Query: 336 -KKDTLAWTAMISVFALNG---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
D W A++ ++G G++A + EME + N +V L + A SG
Sbjct: 569 FYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPD----NSGMYVLLSNLYAASGRWR 624
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS-------EAERL 432
+ R MR + + Y + ++I ++ +F+ EAER+
Sbjct: 625 EVREMRSKMRDKGVKKVPGYSW---VEIQNKTHIFTVGDCSHPEAERI 669
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/600 (30%), Positives = 315/600 (52%), Gaps = 88/600 (14%)
Query: 22 PNKESTKLILRNAID-ECKNMRELKEIHTQIIKSPCLQTNDHHSLIT-RLLFFCALSVSG 79
P+ + TKLI + + C ++ + K+ H ++++ L H+ L + +L+ F ALS SG
Sbjct: 4 PSSKCTKLISVDFLKTHCTSISKTKQAHALLLRTHLL----HNPLFSSKLISFLALSHSG 59
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
L+YA +F+ ++ D + N MIR A + + + LY M+ G+ D T
Sbjct: 60 DLNYARKLFTQMQNPDPFICNTMIRGYA------RSQNPYEAVSLYYFMVERGVPVDNYT 113
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFG-----------------------VCD------ 170
+PF+L C + +G + +V+K G CD
Sbjct: 114 YPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDEST 173
Query: 171 --DVFVQNSVISLFMACGFVTSARMLFDEMSNRD--------VVSW-------------- 206
DV N +I+ + G A L DEM+ D +VS
Sbjct: 174 VRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGK 233
Query: 207 ------------------NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
NA++ Y + D++ A ++F R++++++ SW S+++G + G
Sbjct: 234 FLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSG 293
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
+EAL LFQ+MQ + +E D+IT+ VLSACA GA+D GK++H + + ++CD+
Sbjct: 294 YFQEALALFQKMQLNKIE----LDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDL 349
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
V+ TALVDMY KCG ++ A VF+ M ++ W A+I A++G+G++A F +ME +
Sbjct: 350 VLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHD 409
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
+ P+ VTF+ LL AC+H+GLV++G F M++ + +EP + HY C++D+L RA +
Sbjct: 410 KLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDD 469
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A I +MP++ + +W LLG C+ G+ +L EK+ + +I+L+P + YV L ++YA
Sbjct: 470 ALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAG 529
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
++D K R MK +GI K PGCS +E++G++H+F + E++ ++ +++
Sbjct: 530 VSQWDHALKLRKQMKNKGIEK-TPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTR 588
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/431 (37%), Positives = 252/431 (58%), Gaps = 13/431 (3%)
Query: 133 ISPDCLTFPFLLKECTKRLDGLVG--------ASVYGQVVKFGVCDDVFVQNSVISLFMA 184
++PD +F FL++ T SV+ ++ G D VQ+ +S++ A
Sbjct: 190 LAPDNYSFTFLVRAATALAAAAASALDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAA 249
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
G V +AR F E+++ DVV AM+ G+ D A +LF M +R+ +WN++I G+
Sbjct: 250 AGDVGAARAAFAEIASPDVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGY 309
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
V GR+REAL LF EM+ + ++T+ S L+ACA LGA++ GKWVH G+
Sbjct: 310 VHTGRSREALRLFDEMRHAGAAV----GEVTLVSALTACAQLGALERGKWVHSCAHSRGM 365
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
V +GTAL+DMY KCG V A VF M +++ WT+ +S A+NG G++ F+
Sbjct: 366 RLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKR 425
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
ME+ GV PN VTFV +L C+ +GLV++GR CF M+ + ++P + HY CM+D+ RAG
Sbjct: 426 MESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAG 485
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
+A I MP+EP VWGALL ++H NVELG+ L+ ++ N A +V L +
Sbjct: 486 RLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSN 545
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
+YA + + V RN+MK +G++K VPGCS++EV G VHEF + G +E+ ++L
Sbjct: 546 IYADSQNWKGVSNVRNMMKAKGVKK-VPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLA 604
Query: 545 GLSKIMKNGGF 555
+++ ++ G+
Sbjct: 605 EMNQRLRLQGY 615
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 272/496 (54%), Gaps = 47/496 (9%)
Query: 65 LITRLL-FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
L T+L+ +C + SL+ A +F I + +L+ +N+MIR A +
Sbjct: 38 LATKLVNLYC---ICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYE------LAIS 88
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
LY QM G+ PD TFPF+LK C+ G ++ V++ G+ DVFV ++I ++
Sbjct: 89 LYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYA 148
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
CG V SAR +FD++ RDVV WN+M+ Y ++G D +L L R M ++N +
Sbjct: 149 KCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVM------AFNGL--- 199
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
KP + T ++A A G + GK +HGY R G
Sbjct: 200 --------------------------KPTEGTFVISIAASADNGLLPQGKELHGYSWRHG 233
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
+ + + TAL+DMY K G V A +F+ + +K ++W AMI+ +A++G+ EA D F+
Sbjct: 234 FESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFK 293
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
EM+ + V P+H+TFVG+L+AC+H GL+ +G+ F M + + P V HY CMID+L
Sbjct: 294 EMKGK-VLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHC 352
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
G EA +LI M +EPD VWGALL C++HGNVE+GE + L++L+P + YV L
Sbjct: 353 GRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILS 412
Query: 484 DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLIL 543
+MYA+AG++D V + R+LM +G++K + CS +EV VH F + + E + L
Sbjct: 413 NMYAQAGKWDGVARLRDLMMNKGLKKSI-ACSWIEVGNKVHAFLSEDTSHPKSEAIYAEL 471
Query: 544 NGLSKIMKNGGFGQYI 559
K+MK G+ +
Sbjct: 472 KRTGKLMKEAGYAPQV 487
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 159/319 (49%), Gaps = 39/319 (12%)
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
+ LL+ C R G ++ ++ + G+ + + +++L+ C +T+A +LFD +S
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
R++ WN MI GY +G ++A+ L+ +M+ +
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLV------------------------ 99
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
PDK T VL AC+ L A++ GK +H + RSGL+ DV +G AL+DMY
Sbjct: 100 -----------PDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYA 148
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCGCVE A VF ++ ++D + W +M++ ++ NG E+ R M G++P TFV
Sbjct: 149 KCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVI 208
Query: 380 LLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
++A A +GL+ +G+ RH + V ++D+ +++G + A L +
Sbjct: 209 SIAASADNGLLPQGKELHGYSWRHGFESNDKV--KTALMDMYAKSGSVNVARSLFELLE- 265
Query: 439 EPDVFVWGALLGGCQMHGN 457
E V W A++ G MHG+
Sbjct: 266 EKRVVSWNAMITGYAMHGH 284
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 275/482 (57%), Gaps = 13/482 (2%)
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
+F + D +N++I C++ +D L+L++ M + + PD + +L
Sbjct: 178 LFDKMCHPDAVAWNMIIDG-YCQNGHYDDA-----LRLFEDMRSSDMKPDSVILCTVLSA 231
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
C + G +++ V G D +Q ++I+++ CG + AR ++D +S++ ++
Sbjct: 232 CGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVS 291
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM-QSSSV 265
AM+ GY + G + A +F +M +R++ W+++I+G+ + + +EAL+LF EM Q SV
Sbjct: 292 TAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSV 351
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
PD+IT+ SV+SAC+++GA+ W+H Y+ RSG + + AL+DMY KCG +
Sbjct: 352 -----PDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLV 406
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
+A VF+ MP+K+ ++W++MI+ FA++G A FR M+ + PN VTF+G+L AC
Sbjct: 407 KAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACG 466
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
H+GLVE+G F M + + + P HY CM+D+ RA +A LI +MP P+V +W
Sbjct: 467 HAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIW 526
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
G+L+ CQ+HG ELGE A+ L++L+P + V L ++YAK R++DV R M +
Sbjct: 527 GSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYK 586
Query: 506 GIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYIRGLSME 565
GI KE S +E++ VH F M +E+ L+ + +K G+ G+ ++
Sbjct: 587 GISKE-KASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILID 645
Query: 566 AQ 567
+
Sbjct: 646 LE 647
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 240/516 (46%), Gaps = 94/516 (18%)
Query: 43 ELKEIHTQIIKSPCLQTNDHHSLITRL--LFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
LK+IH QI+ S N + +L+++L S S SL YA +VFS I + N
Sbjct: 31 HLKQIHAQILHSNTTPENTN-TLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSN 89
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDCLTFPFLLKECTKRLDGLVGASV 159
++R + + K + LY + + D +FP LLK +K G +
Sbjct: 90 QLLR------HLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEI 143
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+G K G DD F+Q +I+++ +C + AR+LFD+M + D V+WN +I GY ++G
Sbjct: 144 HGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHY 203
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
D +AL LF++M+SS +KPD + + +V
Sbjct: 204 D-------------------------------DALRLFEDMRSSD----MKPDSVILCTV 228
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC---------------- 323
LSAC + G + +G+ +H +++ +G D + TAL++MY CG
Sbjct: 229 LSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHL 288
Query: 324 ---------------VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
V+ A +F +M ++D + W+AMIS +A + +EA F EM +
Sbjct: 289 IVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQK 348
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA-----CMIDILSRA 423
P+ +T + ++SAC+H G + + W H Y V+ + A +ID+ ++
Sbjct: 349 RSVPDQITMLSVISACSHVGALAQANWI-----HTY-VDRSGFGRALSVNNALIDMYAKC 402
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL--IDLDPLNHAFYVN 481
G +A + +MP +V W +++ MHGN + K+ + + ++++P N ++
Sbjct: 403 GNLVKAREVFENMP-RKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEP-NGVTFIG 460
Query: 482 LCDMYAKAGRFDDVKKT-RNLMKERGIR--KEVPGC 514
+ AG ++ +K +++ E GI +E GC
Sbjct: 461 VLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGC 496
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 128/327 (39%), Gaps = 78/327 (23%)
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
D+ + S+L A + + A +HG +HG + G D I T L+ MY C + A +F
Sbjct: 120 DRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLF 179
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+M D +AW +I + NG+ +A F +M + ++P+ V +LSAC H+G +
Sbjct: 180 DKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLS 239
Query: 392 KGRWC--FV--------------------------MMRHVY--LVEPHVYHYACMIDILS 421
GR FV + R +Y L H+ M+ +
Sbjct: 240 YGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYA 299
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGG------------------------------ 451
+ G+ +A R I +E D+ W A++ G
Sbjct: 300 KLGMVKDA-RFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITML 358
Query: 452 -----CQMHGNVELGEKVAQYLIDLDPLNHAFYVN--LCDMYAKAGRFDDVKKTRNLMKE 504
C G + + Y +D A VN L DMYAK G NL+K
Sbjct: 359 SVISACSHVGALAQANWIHTY-VDRSGFGRALSVNNALIDMYAKCG---------NLVKA 408
Query: 505 RGIRKEVPGCSSVEVDGVVHEFSMKGS 531
R + + +P + + +++ F+M G+
Sbjct: 409 REVFENMPRKNVISWSSMINAFAMHGN 435
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 257/450 (57%), Gaps = 12/450 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G L A +F + + +++ MI + + ++ + LKL+ +M+ G P+
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMI------ARYSQSGYAEEALKLFSKMVQEGFKPNI 316
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
F L G +++G V K G+ DVF+ +S+I L+ CG R++FD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ ++VV WN+M+ GY +G L+ +LF + ++N SW +II G+++ + + LE+F
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVF 436
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+ S P+K T +SVL ACA + ++D G VHG + + G+ D+ +GTAL DM
Sbjct: 437 NTLLVSGQ----TPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDM 492
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME-AEGVRPNHVT 376
Y KCG + + VF+ MP+K+ ++WT MI A +G+ E+ F EME V PN +
Sbjct: 493 YAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
+ +L AC+H GLV+KG W F M VY ++P HY C++D+LSR+G EAE IR++
Sbjct: 553 LLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTI 612
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
P +P+ W ALL GC+ + + ++ E+ A+ L L N A YV L ++YA AGR+ DV
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVS 672
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R LM+E+G++K GCS VEV VH F
Sbjct: 673 NIRKLMREKGLKKS-GGCSWVEVRNQVHSF 701
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 191/369 (51%), Gaps = 39/369 (10%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ LKL+ ++L +G+ P+ +TF +++ C + D +G S+ G VVK G + V NS+I
Sbjct: 167 EALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLI 226
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
+L + G + AR +FD M RDVVSW A++ Y+ +GDL A +F M +RN SW++
Sbjct: 227 TLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSA 286
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I + Q G A EAL+LF +M V+E KP+ A LSA A L A+ G +HG++
Sbjct: 287 MIARYSQSGYAEEALKLFSKM----VQEGFKPNISCFACTLSALASLRALSAGINIHGHV 342
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG------ 353
+ G+D DV IG++L+D+Y KCG + VF + +K+ + W +M+ +++NG
Sbjct: 343 TKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETE 402
Query: 354 -------------YG------------KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+G ++ + F + G PN TF +L ACA
Sbjct: 403 ELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIA 462
Query: 389 LVEKGRWCFVMMRHVYL-VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
++KG V + + L ++ ++ + D+ ++ G ++++ MP E + W
Sbjct: 463 SLDKG--MNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP-EKNEISWTV 519
Query: 448 LLGGCQMHG 456
++ G G
Sbjct: 520 MIQGLAESG 528
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 41/328 (12%)
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
Q+VK D+ V N +IS ++ G + AR+LFDEM R+ VSW+A+I G ++ G ++
Sbjct: 77 QIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEE 136
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
++ F R +N+ SW + I+GFV+ G EAL+LF + +E V+P+ +T SV+
Sbjct: 137 SMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRL----LESGVRPNDVTFTSVVR 192
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDC-------------------------------DVVI 310
AC LG G + G + ++G + DVV
Sbjct: 193 ACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVS 252
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
TA++D Y + G + A +F EMP+++ ++W+AMI+ ++ +GY +EA F +M EG
Sbjct: 253 WTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGF 312
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL--VEPHVYHYACMIDILSRAGLFSE 428
+PN F LSA A + G + HV ++ V+ + +ID+ + G +
Sbjct: 313 KPNISCFACTLSALASLRALSAG---INIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDD 369
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHG 456
RL+ + +E +V W +++GG ++G
Sbjct: 370 G-RLVFDLILEKNVVCWNSMVGGYSING 396
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 257/450 (57%), Gaps = 19/450 (4%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G L +A +F + + D +YN MI C S+E+ + + L + + IS +
Sbjct: 174 GWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTES----ARELFDLMPEEMKNLISWNS 229
Query: 138 LTFPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
+ + + DG+ + + ++ ++ D+ NS+I ++ G + A+ LFD
Sbjct: 230 MISGY-----AQTSDGVDIASKLFSEMPD----KDLISWNSMIDGYVKHGRIEDAKYLFD 280
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
M RDVV+W+ MI GY + G + A LF +M R++ S+NS+I G+VQ EALE+
Sbjct: 281 VMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEI 340
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F +M+ E + PD+ T+ VLSA A LG + +H Y+ +G AL+D
Sbjct: 341 FSDMEK---ESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALID 397
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG ++ A VFK + K W AMI A++G G+ AFD ++E ++P+ +T
Sbjct: 398 MYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDIT 457
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FVGLL+AC+HSGLV++G CF +MR + +EP + HY CM+DILSR+G A+ LI M
Sbjct: 458 FVGLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEM 517
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
P+EP+ +W L C H E GE VA++LI N + YV L ++YA G++ DV+
Sbjct: 518 PIEPNDVIWRTFLAACNHHKEFETGELVAKHLIWEAGYNPSSYVLLSNLYASFGKWKDVR 577
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ R +MKER I K VPGCS +E+DG VHEF
Sbjct: 578 RIRTIMKERKIEK-VPGCSWIELDGRVHEF 606
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 234/458 (51%), Gaps = 57/458 (12%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRL-LFFCALSVSGSLSYATNVF-SHIKRS- 94
CKN ++ +IH +++ + ++ + L TR+ L F A + +A VF + RS
Sbjct: 24 CKNSEDVNKIHARLVTNGFIKNPN---LTTRIVLAFAASRRPYXVEFARFVFHEYXIRSF 80
Query: 95 --------DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
D Y +N +I+ S ++ T + L L+ ML G+S D + +LK
Sbjct: 81 SPGGGDXEDXYLWNAVIK------SHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKA 134
Query: 147 CTKRLDGLV--GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
C++ GLV G ++G + K G+ D+F+QN +I L++ CG++ AR +FD M RD V
Sbjct: 135 CSRL--GLVKEGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSV 192
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKK--RNIFSWNSIITGFVQGGRARE-ALELFQEMQ 261
S+N+MI GY++ G + A +LF M + +N+ SWNS+I+G+ Q + A +LF EM
Sbjct: 193 SYNSMIDGYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEM- 251
Query: 262 SSSVEEMVKPDK--ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
PDK I+ S++ G I+ K++ + R DVV + ++D Y
Sbjct: 252 ---------PDKDLISWNSMIDGYVKHGRIEDAKYLFDVMPRR----DVVTWSTMIDGYA 298
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFV 378
K G V +A +F +MP +D +++ +MI+ + N Y EA + F +ME E + P+ T V
Sbjct: 299 KLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLV 358
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA----CMIDILSRAGLFSEAERLIR 434
+LSA A G + K M H+Y+VE + +ID+ S+ G A + +
Sbjct: 359 IVLSAIAQLGRLSKA-----MDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFK 413
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
+ + W A++GG +HG LGE L+ ++
Sbjct: 414 GIE-NKSIDHWNAMIGGLAIHG---LGESAFDMLLQIE 447
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/446 (34%), Positives = 259/446 (58%), Gaps = 11/446 (2%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A VF + DL + +M+ S N + + L L +M + + PD + +
Sbjct: 47 ARRVFDGMPERDLVAWGVML------DSYFNTQNYRETLLLLNKMKRSRVVPDQVILATV 100
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
L C G +++ + + D + +++I+++ +C + A ++ M +D+
Sbjct: 101 LSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMADKIYSGMQRKDL 160
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
VS AM+ GY ++G +++A +F M ++++ SW+++I+ + + + E L LF +MQ
Sbjct: 161 VSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGC 220
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
V PD+IT+ SV+SACA +G++D +W+H + G + I AL+DM+ KCG
Sbjct: 221 GV----SPDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKILSICNALIDMFSKCGS 276
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
+ A +F MP+K+ + WT+MI+ FA++G G A F +M+ EGV PN VTF+ LL A
Sbjct: 277 LTLALNMFNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYA 336
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C H+GLV +GR F M Y +EP HY CM+D++ RA L EA LI SM + P+V
Sbjct: 337 CCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRPNVA 396
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+WG+LL C MHG++ELGE A+ +++LDP + YV L +++AK+G +++ +K R +MK
Sbjct: 397 IWGSLLAACWMHGDIELGEFAAKKILELDPNHDGAYVLLSNIHAKSGNWNNAQKLRVMMK 456
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMK 529
G+ KE G S +E++ VH F ++
Sbjct: 457 VHGVSKET-GYSWLELNCTVHGFQLE 481
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 149/335 (44%), Gaps = 78/335 (23%)
Query: 159 VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD 218
+G V+ G +D FV +++ + AC V AR +FD M RD+V+W M+ Y + +
Sbjct: 15 THGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQN 74
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
RE L L +M+ S V PD++ +A+
Sbjct: 75 Y-------------------------------RETLLLLNKMKRSR----VVPDQVILAT 99
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC----------------- 321
VLS C + + GK +H Y++ S + D + +AL++MY C
Sbjct: 100 VLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMADKIYSGMQRKD 159
Query: 322 --------------GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
G +E A +F M +KD ++W+AMIS +A N E + F +M+
Sbjct: 160 LVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQG 219
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA-----CMIDILSR 422
GV P+ +T + ++SACA+ G ++K RW +V H ++ +ID+ S+
Sbjct: 220 CGVSPDEITMLSVISACANIGSLDKARWIH------SIVGNHGFYKILSICNALIDMFSK 273
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
G + A + +MP +V W +++ MHG+
Sbjct: 274 CGSLTLALNMFNAMP-RKNVITWTSMIAAFAMHGD 307
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 19/228 (8%)
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI-SV 348
D + HG R G D D +GTALV Y C V A VF MP++D +AW M+ S
Sbjct: 10 DTVRGTHGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSY 69
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR--WCFVMMRHVY-- 404
F Y +E +M+ V P+ V +LS C H+ + G+ ++ + ++
Sbjct: 70 FNTQNY-RETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVD 128
Query: 405 --LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
L + YA +D+ ++S +R D+ A++ G +G +E+
Sbjct: 129 ARLSSALINMYASCMDMEMADKIYSGMQR--------KDLVSSTAMVCGYAKNGKIEIAR 180
Query: 463 KVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
+ ++ + D ++ + + YA+ + +V N M+ G+ +
Sbjct: 181 SIFNHMAEKDVVS---WSAMISAYAENNQPSEVLNLFNKMQGCGVSPD 225
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/494 (34%), Positives = 275/494 (55%), Gaps = 47/494 (9%)
Query: 66 ITRLLFFCALSVS-----GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
+ RL +F A +S G LS A +F I +++ + ++ A A + +
Sbjct: 834 LARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRG------FYEE 887
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L + +M G+ P+ P +LK C D G +++ ++K D ++ +++I
Sbjct: 888 ALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIY 947
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK----KRNIFS 236
++ CG V A +FD + ++D+V NAM+ GY + G + ALBL ++M+ K N+ S
Sbjct: 948 MYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVS 1007
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVE---------------------------EMV 269
WN++I GF Q G E+F+ M ++ VE EM+
Sbjct: 1008 WNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEML 1067
Query: 270 K----PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
P +TI+S+L AC + + HGK +HGY G++ DV + +ALVDMY KCG +
Sbjct: 1068 DQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYIS 1127
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
A +F MP+++T+ W ++I +A +GY EA + F +ME + +H+TF +L+AC+
Sbjct: 1128 EAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACS 1187
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
H+G+VE G F M+ Y +EP + HYACM+D+L RAG SEA LI++MP+EPD FVW
Sbjct: 1188 HAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVW 1247
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
GALLG C+ HGN+EL E A++L +L+P + + L ++YA AGR+ + K + +MK+R
Sbjct: 1248 GALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQR 1307
Query: 506 GIRKEVPGCSSVEV 519
K PGCS +E
Sbjct: 1308 KFGK-FPGCSWIEA 1320
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 253/488 (51%), Gaps = 50/488 (10%)
Query: 41 MRELKEIHTQIIKSPCL-QTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
++E K++H ++K L +T ++L+T S G + A VF +++ ++ ++
Sbjct: 230 IQEGKQLHAHVVKMQYLSETAVGNALLT------LYSKCGMMEEAEIVFESLRQRNIISW 283
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
I + D K LK + M +GI P+ TF +L C D + G
Sbjct: 284 TASING----FYQHGDFK--KALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMF 337
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ QV+K G+ VFV ++I ++ G ++
Sbjct: 338 HTQVIKKGMASGVFVGTAIIDMYSGLG-------------------------------EM 366
Query: 220 DVALDLFRRM-KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
D A F++M + + SWN++I G+V + +A+E F M V+E V ++ T ++
Sbjct: 367 DEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRM----VKEDVACNEFTYSN 422
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+ AC+ ++ +H L +S ++ ++ + ++L++ Y +CG +E A VF ++ D
Sbjct: 423 IFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDAD 482
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++W ++I ++ NG +A R+M EG +P TF+ +LSAC+HSGLV++G+ F
Sbjct: 483 VVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFK 542
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
M Y ++P H +CM+DIL RAG A I+ + M+P +W LL C+ + N+
Sbjct: 543 SMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNL 602
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
++ E VA+ ++DL+P + YV L +MYA+ GR+ D + R LM+++ I KE PGCS +E
Sbjct: 603 QMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKE-PGCSWIE 661
Query: 519 VDGVVHEF 526
V+ +++F
Sbjct: 662 VNNKMYKF 669
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 141/301 (46%), Gaps = 44/301 (14%)
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
VVK G+ D FV S+I ++ CG V SA ++D+M++ D + N +I Y R+G
Sbjct: 139 VVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNG----- 193
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
FVQ A ++F ++ + +P+ T +++L+
Sbjct: 194 --------------------FFVQ------AFQVFMQIGNMG----TRPNHYTYSTMLAV 223
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
C + AI GK +H ++ + + +G AL+ +Y KCG +E A VF+ + +++ ++W
Sbjct: 224 CGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISW 283
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
TA I+ F +G K+A F M G+ PN TF +L++C GR M H
Sbjct: 284 TASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGR-----MFH 338
Query: 403 VYLVE----PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+++ V+ +ID+ S G EAE+ + M W AL+ G ++ +
Sbjct: 339 TQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKI 398
Query: 459 E 459
E
Sbjct: 399 E 399
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 156/355 (43%), Gaps = 42/355 (11%)
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G +++ +V G+ + ++S + CG +++AR LFD++ N ++ W + R
Sbjct: 822 GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 881
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
G + AL F M+K E ++P++
Sbjct: 882 RGFYEEALSAFSEMQK-----------------------------------EGLRPNQFV 906
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ S+L AC +L G+ +H + ++ + D I +AL+ MY KCG VE+A VF +
Sbjct: 907 LPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIV 966
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
KD + AM+S +A +G+ EA B ++M+ GV+PN V++ L++ + G
Sbjct: 967 DKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSE 1026
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME---PDVFVWGALLGGC 452
F +M VEP V + +I + E + M + P +LL C
Sbjct: 1027 VFRLMT-ANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPAC 1085
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVN--LCDMYAKAGRFDDVKKTRNLMKER 505
N+ G+++ Y + + + YV L DMYAK G + K +M ER
Sbjct: 1086 TNVANLRHGKEIHGYAMVIG-VEKDVYVRSALVDMYAKCGYISEAKILFYMMPER 1139
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
P + + S LS C G ++ G+ H ++ + GL D + T+L+DMY KCG V+ A V
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
+ +M D +IS +A NG+ +AF F ++ G RPNH T+ +L+ C +
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAI 230
Query: 391 EKGRWCFV-MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
++G+ +++ YL E V + ++ + S+ G+ EAE + S+ + ++ W A +
Sbjct: 231 QEGKQLHAHVVKMQYLSETAVGN--ALLTLYSKCGMMEEAEIVFESL-RQRNIISWTASI 287
Query: 450 GGCQMHGN 457
G HG+
Sbjct: 288 NGFYQHGD 295
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 132/315 (41%), Gaps = 11/315 (3%)
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE---LFQEMQSSSVEEMVKPDKI 274
+L V LD + MK + + I T + + +++ ++ S +
Sbjct: 745 NLRVCLDCYSTMKYISRITDRYIPTPLAAAAAMQSLINRANVYRVYRNISTHRTFQSSSD 804
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T A + A A+ G+ +H +L GL L+ Y +CG + A +F ++
Sbjct: 805 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
P + W + A G+ +EA F EM+ EG+RPN +L AC H G
Sbjct: 865 PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGE 924
Query: 395 WCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
V++++ + E Y + +I + S+ G +A R+ + ++ D+ V A++ G
Sbjct: 925 NMHTVILKNSF--ESDAYIISALIYMYSKCGHVEKACRVFDWI-VDKDLVVMNAMVSGYA 981
Query: 454 MHGNVELGEKVAQYL--IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
HG V + Q + + P N + L +++ G V + LM G+ +V
Sbjct: 982 QHGFVHEALBLVQKMQQAGVKP-NVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDV 1040
Query: 512 PGCSSVEVDGVVHEF 526
+SV + G V F
Sbjct: 1041 VSWTSV-ISGFVQNF 1054
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 273/497 (54%), Gaps = 57/497 (11%)
Query: 38 CKNMREL---KEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVSGSLSYATNVFSHIK 92
C N+ L + H+ + K L ++ H HSLIT S G +++A VF I
Sbjct: 126 CANLAVLSPARAAHSLVFK-LALHSDPHTTHSLIT------MYSRCGRVAFARKVFDEIP 178
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM-LCTGISPDCLTFPFLLKECTKRL 151
R DL ++N MI A + + ++++ +M G PD ++ +L C +
Sbjct: 179 RRDLVSWNSMIAGYAKAGC------AREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELG 232
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
D +G V G VV+ G+ + ++ +++IS++ CG
Sbjct: 233 DLELGRWVEGFVVERGMTLNSYIGSALISMYAKCG------------------------- 267
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
DL A +F M R++ +WN++I+G+ Q G A EA+ LF M+ E+ V
Sbjct: 268 ------DLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMK----EDCVTE 317
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
+KIT+ +VLSACA +GA+D GK + Y + G D+ + TAL+DMY KCG + A VF
Sbjct: 318 NKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVF 377
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM--EAEGVRPNHVTFVGLLSACAHSGL 389
KEMP+K+ +W AMIS A +G KEA F+ M E G RPN +TFVGLLSAC H+GL
Sbjct: 378 KEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGL 437
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V +G F MM ++ + P + HY+CM+D+L+RAG EA LI MP +PD GALL
Sbjct: 438 VNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALL 497
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
G C+ NV++GE+V + ++++DP N Y+ +YA ++D + R LM+++GI K
Sbjct: 498 GACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITK 557
Query: 510 EVPGCSSVEVDGVVHEF 526
PGCS +EV+ +HEF
Sbjct: 558 -TPGCSWIEVENHLHEF 573
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 286/522 (54%), Gaps = 53/522 (10%)
Query: 31 LRNAIDECKNMRELKE---IHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNV 87
L C N+ L E +H ++K T +S + + L S G+ A
Sbjct: 241 LEGGFQACGNLGALLEGRCLHGLVVK-----TGMDYSQVVQSLLLSMYSKCGNPEEAHRS 295
Query: 88 FSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKEC 147
F + D+ ++ MI A + T +C+ ++ +ML +GI PD + +L
Sbjct: 296 FCEVLNKDIISWTSMISAYSRMGWAT------ECIDMFWEMLVSGIYPDGIVISCMLSSF 349
Query: 148 TKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWN 207
+ + + +G +++ D VQN+++S++ GF+ A F ++ ++ +WN
Sbjct: 350 SNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWN 409
Query: 208 AMIIGYL--------------------------------RSGDLDVALDLFRRMKKRNIF 235
M+ GY +SG+L +A +F R+ R+I
Sbjct: 410 LMVSGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIV 468
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
+WN++I+ + G EAL L+ +M V E +KP+ T+ SVLSAC++L +++ G+ V
Sbjct: 469 TWNTLISSYAHCGHFAEALSLYDKM----VLEDLKPNSATLVSVLSACSHLASLEEGEKV 524
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H Y+ + ++ I TAL+DMY KCG +E++ +F M ++D + W MIS + ++G
Sbjct: 525 HNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDA 584
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+ A + F++ME +PN +TF+ +LSACAH+GLV++G++ F M+ Y V P++ HYAC
Sbjct: 585 RSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQD-YSVAPNLKHYAC 643
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
M+D+L R+G EAE L+ SMP+ PD VWGALL C++H +E+G ++A++ ID D N
Sbjct: 644 MVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVEN 703
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
+YV + +MY+ G++++ +K R +MKERG+RK+ G S+V
Sbjct: 704 DGYYVMISNMYSSIGKWEEAEKARGIMKERGVRKKT-GWSAV 744
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 195/419 (46%), Gaps = 47/419 (11%)
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
S +T +F I D + +N +I+A+ +N +S + L Y+ M + P+ T P
Sbjct: 84 SCSTELFDEIPHRDAFLWNSIIKAHF-----SNGEYS-RALDFYQWMRASEALPNHFTIP 137
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGV-CDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
++ C + G S++G V K G+ V +S + ++ CG + A +FDE+
Sbjct: 138 MIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEI-- 195
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
LFR ++ +W +++ G VQ G ++ LE EM
Sbjct: 196 ------------------------LFR-----DVVAWTALVIGCVQNGESKMGLECLCEM 226
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
+ +P+ T+ AC LGA+ G+ +HG + ++G+D V+ + L+ MY K
Sbjct: 227 HRIGGDGE-RPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSK 285
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG E A+ F E+ KD ++WT+MIS ++ G+ E D F EM G+ P+ + +
Sbjct: 286 CGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCM 345
Query: 381 LSACAHSGLV-EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
LS+ ++S V E + +++R Y ++ V + ++ + + G AE+ + E
Sbjct: 346 LSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQN--ALLSMYCKFGFLKLAEKFFGRVN-E 402
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLI-DLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+ W ++ G +G L + Y+I +L N + +L DMY K+G ++
Sbjct: 403 QNFEAWNLMVSG---YGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARR 458
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 39/236 (16%)
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
++ G +++F+ + +ISL+ + + + LFDE+ +RD WN++I + +G+ A
Sbjct: 58 IITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEYSRA 117
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
LD ++ M RA EAL P+ TI ++++
Sbjct: 118 LDFYQWM-------------------RASEAL----------------PNHFTIPMIVAS 142
Query: 283 CAYLGAIDHGKWVHGYLRRSGL-DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
CA L +++G+ +HG + + GL +G++ V MY KCG +E AYGVF E+ +D +A
Sbjct: 143 CAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVA 202
Query: 342 WTAMISVFALNGYGKEAFDTFREME---AEGVRPNHVTFVGLLSACAHSGLVEKGR 394
WTA++ NG K + EM +G RPN T G AC + G + +GR
Sbjct: 203 WTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGR 258
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H ++ SG ++ I + L+ +Y + +F E+P +D W ++I NG
Sbjct: 55 HAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEY 114
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
A D ++ M A PNH T ++++CA LV GR ++ + L +
Sbjct: 115 SRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSS 174
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
+ + S+ G+ EA + + DV W AL+ GC +G ++G
Sbjct: 175 FVYMYSKCGVLEEAYGVFDEILFR-DVVAWTALVIGCVQNGESKMG 219
>gi|297599623|ref|NP_001047477.2| Os02g0625100 [Oryza sativa Japonica Group]
gi|125582938|gb|EAZ23869.1| hypothetical protein OsJ_07586 [Oryza sativa Japonica Group]
gi|255671102|dbj|BAF09391.2| Os02g0625100 [Oryza sativa Japonica Group]
Length = 493
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/409 (39%), Positives = 232/409 (56%), Gaps = 38/409 (9%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
PD L+ F L C++ V + V+ V+ G DV+V N+ S + A V SA L
Sbjct: 69 PDHLSLSFSLHPCSRLPSHPVASVVHSLAVRLGHARDVYVVNAAASAYFAAADVASAERL 128
Query: 195 ---------------------------------FDEMSNRDVVSWNAMIIGYLRSGDLDV 221
FD M ++VVSWN M+ Y R+G L
Sbjct: 129 FSEASRDVADVVTWTTMVTGHANAGDVERARWFFDAMPEKNVVSWNTMLGAYARAGMLPK 188
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
A LF RM RN +W S+ITG +Q EAL +F +M +S V P++ + S +S
Sbjct: 189 ARKLFDRMPSRNAATWGSMITGLLQSDHCEEALRVFSDMVASG----VVPNEPALVSTVS 244
Query: 282 ACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
AC L ++HG WVHGY R V+ TA+VDMYGKCG + A VF MP ++
Sbjct: 245 ACTQLRWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKCGSIRDAVRVFAAMPVRNIY 304
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+W +MI+ A+NG ++A F +M+ GVRPN +TF+GLLSAC+HSGLV++GRW F M
Sbjct: 305 SWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSACSHSGLVDEGRWLFYKM 364
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+ + ++P HY M+D+L R+G EA ++SMP+EP +WGAL G C++HG VEL
Sbjct: 365 VNHFGIQPVPEHYGLMVDLLGRSGHVREAVDFVKSMPVEPHPGLWGALAGACKIHGEVEL 424
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
GE+VA+ LI+L+P + + Y+ L ++YA + R+DD+ R ++K+R + K
Sbjct: 425 GEEVAKKLIELEPQHGSRYILLSNIYATSNRWDDMANVRRILKDRKVPK 473
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/482 (36%), Positives = 268/482 (55%), Gaps = 33/482 (6%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP--DCL 138
L A +F I DL ++N MI S D + +L+++ SP D
Sbjct: 204 LGDARQLFDQIPVRDLISWNTMI------SGYAQDGDLSQARRLFEE------SPVRDVF 251
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM----- 193
T+ ++ + DG++ + V D++ + + M G+ RM
Sbjct: 252 TWTAMVYAYVQ--DGMLDEARR-------VFDEMPQKREMSYNVMIAGYAQYKRMDMGRE 302
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LF+EM ++ SWN MI GY ++GDL A +LF M +R+ SW +II G+ Q G EA
Sbjct: 303 LFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEA 362
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
+ + EM+ E + ++ T LSACA + A++ GK VHG + R+G + ++G A
Sbjct: 363 MNMLVEMKRDG-ESL---NRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNA 418
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
LV MY KCGC++ AY VF+ + KD ++W M++ +A +G+G++A F M GV+P+
Sbjct: 419 LVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPD 478
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
+T VG+LSAC+H+GL ++G F M Y + P+ HYACMID+L RAG EA+ LI
Sbjct: 479 EITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLI 538
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
R+MP EPD WGALLG ++HGN+ELGE+ A+ + ++P N YV L ++YA +GR+
Sbjct: 539 RNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWV 598
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNG 553
DV K R M++ G++K PG S VEV +H F++ K + L L MK+
Sbjct: 599 DVSKMRLKMRQIGVQK-TPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHE 657
Query: 554 GF 555
G+
Sbjct: 658 GY 659
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 155/334 (46%), Gaps = 56/334 (16%)
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLF----MACGFVTS-----ARMLFDEMSNRDVVSWNA 208
S Y + KF + D+F + LF M G+ + ARMLFD M +DVVSWNA
Sbjct: 72 SGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNA 131
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
M+ GY+RSG +D A D+F RM +N SWN ++ +V+ GR EA LF +S S E+
Sbjct: 132 MLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLF---ESKSDWEL 188
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC-----------DVVIGTALVDM 317
+ +C L + GY++R+ L D++ ++
Sbjct: 189 I------------SCNCL--------MGGYVKRNMLGDARQLFDQIPVRDLISWNTMISG 228
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y + G + +A +F+E P +D WTAM+ + +G EA F EM + +++
Sbjct: 229 YAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQK----REMSY 284
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+++ A ++ GR F M P++ + MI + G ++A L MP
Sbjct: 285 NVMIAGYAQYKRMDMGRELFEEMPF-----PNIGSWNIMISGYCQNGDLAQARNLFDMMP 339
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
+ D W A++ G +G L E+ L+++
Sbjct: 340 -QRDSVSWAAIIAGYAQNG---LYEEAMNMLVEM 369
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 145/326 (44%), Gaps = 55/326 (16%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G L+ A N+F + + D ++ +I A N + + + + +M G S +
Sbjct: 325 NGDLAQARNLFDMMPQRDSVSWAAIIAGYA-----QNGLYE-EAMNMLVEMKRDGESLNR 378
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
TF L C +G V+GQVV+ G V N+++ ++ CG + A +F
Sbjct: 379 STFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQG 438
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ ++D+VSWN M+ GY R G R+AL +F
Sbjct: 439 VQHKDIVSWNTMLAGYARH-------------------------------GFGRQALTVF 467
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVD 316
+ M ++ VKPD+IT+ VLSAC++ G D G ++ H + G+ + ++D
Sbjct: 468 ESMITAG----VKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMID 523
Query: 317 MYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG---YGKEAFDTFREMEAEGVRP 372
+ G+ GC+E A + + MP + D W A++ ++G G++A + +ME P
Sbjct: 524 LLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKME-----P 578
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFV 398
++ LLS GRW V
Sbjct: 579 HNSGMYVLLSNL----YAASGRWVDV 600
>gi|115441803|ref|NP_001045181.1| Os01g0914600 [Oryza sativa Japonica Group]
gi|20804987|dbj|BAB92663.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534712|dbj|BAF07095.1| Os01g0914600 [Oryza sativa Japonica Group]
Length = 589
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/532 (34%), Positives = 270/532 (50%), Gaps = 77/532 (14%)
Query: 83 YATNVFSHIKRS---DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
+A +VF+H+ + +N ++R +A S + L + +M ++PD T
Sbjct: 66 HADSVFAHLAEEASRHAFPWNTLVRLHAAASPR-------RSLLYFSRMRRAAVAPDAYT 118
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQ------------------------ 175
FP +LK C VG V+G+ V+ G+ D+F +
Sbjct: 119 FPAVLKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDHGV 178
Query: 176 ------NSVISLFMACG--------------------------------FVTSARMLFDE 197
NS+++ ++ CG V AR LFD+
Sbjct: 179 RDLVSWNSMVAGYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQ 238
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M +RD+V WN+MI GY R G +D A LF M +RN+ SW+ +I G+V+ G EALE F
Sbjct: 239 MPDRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFF 298
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
Q M + KPD++ ++ACA LGA++ G+W+H YL + + DVV+ TAL+DM
Sbjct: 299 QRMLRCGI----KPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDM 354
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG ++ A +F+ MPKK + W MI +GYG +A F +ME E + ++
Sbjct: 355 YVKCGRLDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSI 414
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+ +L++C H+GLV +G F M +EP V HY +ID+L RAG +A I +MP
Sbjct: 415 LAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMP 474
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
MEP +WG+LL C+ H VEL E + L L + YV L ++YA G +DDV +
Sbjct: 475 MEPTPELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFR 534
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
R LM G++K + G S +EVDG +HEF GS KEE+ L L LS I
Sbjct: 535 IRKLMSAEGMKKNI-GRSVIEVDGQIHEFVNGGSSHPHKEEIYLTLWNLSNI 585
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 124/271 (45%), Gaps = 43/271 (15%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F + ++ +++I+I + E N+ L+ +++ML GI PD +
Sbjct: 258 GRMDEARVLFEEMPERNVISWSIVIDGYV-RFGEPNEA-----LEFFQRMLRCGIKPDRV 311
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+ C + G ++ + K V DV VQ ++I +++ CG + A+++F+ M
Sbjct: 312 AAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESM 371
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+ VV+WN MI+ G G +A++LF
Sbjct: 372 PKKSVVTWNVMIV-------------------------------GLGTHGYGLDAIKLFN 400
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDM 317
+M++ E D ++I +VL++C + G + G + + + GL+ V AL+D+
Sbjct: 401 QMET----ERAPMDDLSILAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDL 456
Query: 318 YGKCGCVERAYGVFKEMPKKDTLA-WTAMIS 347
G+ G V++A + MP + T W ++++
Sbjct: 457 LGRAGRVDQARNTIETMPMEPTPELWGSLLA 487
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 254/441 (57%), Gaps = 19/441 (4%)
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+ PD ++ +L C L G +V+G V+ G +D+FV N+++ ++ CG V A
Sbjct: 9 MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI----FSWNSIITGFVQGG 248
+FD + +DVVSWNAM+ GY + G + AL LF +M++ NI SW+++I F Q G
Sbjct: 69 KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128
Query: 249 RAREALELFQEMQSSSVEE-------------MVKPDKITIASVLSACAYLGAIDHGKWV 295
E L++F+EMQ + +VKP+ TI+ L ACA L A+ G+ +
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188
Query: 296 HGYLRRSGLDCDVV-IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
H Y+ R+ D + + L+DMY K G ++ A VF + +K+ ++WT++++ + ++G
Sbjct: 189 HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGR 248
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
GKEA + F EM G++P+ VT + +L AC+HSG++++G F M + V P HYA
Sbjct: 249 GKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYA 308
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
CM+D+L RAG +EA LI M MEP VW ALL GC++H NVELGE A+ L++L+
Sbjct: 309 CMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSE 368
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKV 534
N Y L ++YA A R+ DV + R+LMK GIRK PGCS V+ F +
Sbjct: 369 NDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKR-PGCSWVQGKKGTTTFYVADKTHP 427
Query: 535 VKEELVLILNGLSKIMKNGGF 555
+++ IL L++ +K G+
Sbjct: 428 QSKQIYEILRSLTQRIKVLGY 448
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/475 (35%), Positives = 270/475 (56%), Gaps = 12/475 (2%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLT 139
L + VF + + D+ ++N MI S + C LY++M+ +G P+ +T
Sbjct: 177 LDLSRKVFDRMTKRDVVSWNSMI------SGYSQGGLYEDCKTLYREMVDFSGFRPNGVT 230
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
+L+ C + D G V+ +V V D+ V N++I L+ CG + AR LFDEMS
Sbjct: 231 VVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMS 290
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+D V++ A+I G + G +D +L+LFR MK + + +WN++ITG VQ R L+L +E
Sbjct: 291 EKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVRE 350
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
MQ+ +P+ +T++SVLS AY ++ GK +H Y + G ++ + TA++DMY
Sbjct: 351 MQALGF----RPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYA 406
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
K G + A VF + + + WTA+IS +A++G A F EM +G++P+ VTF
Sbjct: 407 KSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFTA 466
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+L+ACAH G+V+K F M Y ++P V HYAC++ L +A SEA+ + MP+E
Sbjct: 467 VLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEFVSKMPIE 526
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
P VWGALL G + +VELG+ V YL +++P N YV + ++Y++AGR+ + + R
Sbjct: 527 PSAKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGNYVIMANLYSQAGRWKEADEVR 586
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
M + G++K +PG S +E + F + EE+ +IL GL +M++ G
Sbjct: 587 ERMNKVGLQK-IPGSSWIETSEGLRSFIATDTCTENVEEIHVILKGLLGLMRDEG 640
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 211/472 (44%), Gaps = 97/472 (20%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L + + E + + K++H ++I + L ++L+ S + L++A VF
Sbjct: 30 LLHHLTELRLPLQAKQLHARLI---LFSVTPENYLASKLV--ALYSKTNHLAFARYVFDQ 84
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM----LCTGISPDCLTFPFLLKE 146
I + ++YN M+ S ++ H G L L+ + L IS CL LK
Sbjct: 85 IPHKNTFSYNAML-----ISYSLHNRH-GDALDLFSSLASSNLVNNISITCL-----LKS 133
Query: 147 CTKRL--DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
+ D +G V+G V++ G DVFV+N++I+ + C + +R +FD M+ RDVV
Sbjct: 134 LSSFTLSDVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVV 193
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
SWN+MI +G+ QGG + L++EM S
Sbjct: 194 SWNSMI-------------------------------SGYSQGGLYEDCKTLYREMVDFS 222
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
+P+ +T+ SVL AC + G VH ++ + ++ D+ + AL+ +Y KCG +
Sbjct: 223 ---GFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSL 279
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF---------------------- 362
+ A +F EM +KD + + A+IS L+GY ++ + F
Sbjct: 280 DYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNN 339
Query: 363 ---------REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE----PH 409
REM+A G RPN VT +LS A+ ++ G+ H Y ++ +
Sbjct: 340 RHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEI-----HSYAIKIGYHRN 394
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
+Y +ID+ +++G A+R+ + + +W A++ +HG+ L
Sbjct: 395 IYVATAIIDMYAKSGYLRGAQRVF-DQSKDRSLVIWTAIISAYAVHGDANLA 445
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 163/355 (45%), Gaps = 55/355 (15%)
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDV 172
T++T G+ +L L + DC + LL T+ L ++ +++ F V +
Sbjct: 4 TSNTLHGQIHRL----LTSAAGLDCGIYGHLLHHLTELRLPLQAKQLHARLILFSVTPEN 59
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL---RSGDLDVALDLFRRM 229
++ + +++L+ + AR +FD++ +++ S+NAM+I Y R GD ALDLF +
Sbjct: 60 YLASKLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHNRHGD---ALDLFSSL 116
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
N+ + SI L + + S ++ + +
Sbjct: 117 ASSNLVNNISITC-------------LLKSLSSFTLSD---------------------V 142
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
GK VHG++ R+G D DV + AL+ Y KC ++ + VF M K+D ++W +MIS +
Sbjct: 143 KLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGY 202
Query: 350 ALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
+ G ++ +REM + G RPN VT V +L AC + F M H ++V+
Sbjct: 203 SQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQT-----QDLAFGMEVHKFIVDN 257
Query: 409 HVYHYA----CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
V +I + ++ G A L M E D +GA++ G +HG V+
Sbjct: 258 QVEIDISVCNALIGLYAKCGSLDYARELFDEMS-EKDEVTYGAIISGLMLHGYVD 311
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 283/518 (54%), Gaps = 12/518 (2%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ C + LK++H + + + + S +LL F +L +S L YA +F
Sbjct: 16 LSRCATLAHLKQLHGRSVVTARAAS---QSTTFQLLRFASLRLS-CLPYARRLFDSTPHP 71
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRLDG 153
+++ Y+ M+ A A S H L L+ +ML G +P+ +P +L+
Sbjct: 72 NVFLYSAMLSAYAAASPAQAYGHDA--LALFLRMLRRGRPAPNQFVYPLVLRAACAIGVQ 129
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
LV S++ K G ++ S++ + G + AR LFD ++ R+V+SW A++ GY
Sbjct: 130 LV-RSIHSHACKSGFHAYDVIRTSLLDGYSRYGMMLDARKLFDGLTERNVISWTALVSGY 188
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
R+G + A+ LF RM +R++ +WN++ITG Q G EA+ + M V+E + +
Sbjct: 189 ARAGKIGDAIVLFDRMPERDVAAWNAMITGCTQNGLFVEAVGICSRM----VDEGFQLNG 244
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
T++ VLSAC +LG + GK VHGY RS + + L+DMYGKCG ++ A +F E
Sbjct: 245 TTVSCVLSACGHLGMLKIGKVVHGYAWRSCVGFGSSVVNGLIDMYGKCGNLKEARWMFDE 304
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
+ W ++I+ AL+G+ K A F EM EG+ P+ VTFVGLL+AC H G V++G
Sbjct: 305 FSDRSLTTWNSLINCLALHGHSKSAIAVFDEMRDEGIEPDVVTFVGLLNACTHGGFVDEG 364
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
F +M +EP + HY C++D+L RAG F +A +I M ++PD +WG+LL C+
Sbjct: 365 LTYFKLMCDELRIEPEIEHYGCIVDLLGRAGRFEDAMNVINDMKVQPDEVIWGSLLNACR 424
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
H +EL E + L+ L+P N + V L ++Y++ G +++V K R LMKE + K++PG
Sbjct: 425 THRQLELAEFSVRKLLQLNPNNANYVVMLANLYSEGGSWEEVTKIRKLMKEDIMGKKLPG 484
Query: 514 CSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
CS +EVD H F E++ L+ L+ M+
Sbjct: 485 CSWIEVDRKTHRFYSGDDAHPESEDIYDTLDELAASME 522
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 299/598 (50%), Gaps = 120/598 (20%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS-YATNVFS--HI 91
+ CKN ++ +IH ++I + ++ ++ L T+++ A S L+ +A VF H+
Sbjct: 20 VGSCKNSNDVGKIHARLITTGFIKNSN---LTTKIVVAFADSRRPYLAEFARYVFREYHV 76
Query: 92 ------KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK 145
D + +N++I+ S ++ + L + ML GIS D +F +LK
Sbjct: 77 CSFAPGDVKDPFLWNLVIK------SHSHGVDPRRALLWFCLMLENGISVDKFSFSLVLK 130
Query: 146 ECTKRLDGLVGA-SVYGQVVKFGVCDDVFVQNSVISLFMA-------------------- 184
C+ RL L G ++G + K G+ D+F+QN +I L++
Sbjct: 131 ACS-RLGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSV 189
Query: 185 -----------CGFVTSARMLFD----------------------------------EMS 199
CG + SAR LFD EM
Sbjct: 190 SYNSMIDGYIKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSDGVNIASKLFAEMP 249
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW---------------------- 237
+D++SWN++I GY++ G ++ A DLF M +R++ +W
Sbjct: 250 EKDLISWNSLIYGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQ 309
Query: 238 ---------NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
NS++ G+VQ EALE+F +M+ E + PD+ T+ VLSA A LG
Sbjct: 310 MPHRDVVAYNSMMAGYVQNRHHMEALEIFSDMEK---ESHLTPDETTLVIVLSAIAQLGQ 366
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
+ +H Y+ +G AL+DMY KCG +++A VF+ + K W AMI
Sbjct: 367 LSKAMDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENKSIDHWNAMIGG 426
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
A++G G+ AF+ E+E + P+++TFVG+L+AC+HSGLV++G CF +MR + +EP
Sbjct: 427 LAIHGLGESAFNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEP 486
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ HY CM+D+LSR G A+ LI MP+EP+ +W L C H E+GE VA++L
Sbjct: 487 RLQHYGCMVDLLSRCGSIELAKNLIEEMPIEPNDVIWRTFLTACNHHKEFEIGELVAKHL 546
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
I N + YV L +MYA GR+ DV+ R +MKER ++K VPGCS +E+DG VHEF
Sbjct: 547 ILQAGYNPSSYVLLSNMYASFGRWKDVRNVRTMMKERKLQK-VPGCSWIELDGRVHEF 603
>gi|297849216|ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338331|gb|EFH68748.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1014
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 236/392 (60%), Gaps = 6/392 (1%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
K L + M GI D T+ LLK C+ D G V+G+V++ G V+ V+
Sbjct: 607 KSLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGEVIRTGFHRLGKVRIGVV 666
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
L+ + G + A+ +FDEM R+VV WN M+ G+ SGD+ L F++M +R+I SWNS
Sbjct: 667 ELYTSGGRMGDAQKVFDEMPERNVVVWNLMVRGFCDSGDVQRGLSFFKQMSERSIVSWNS 726
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I+ + GR REALELF EM +++ PD+ T+ ++L A LG +D GKW+H
Sbjct: 727 MISSLSKCGRDREALELFCEM----IDQGFDPDEATVVTMLPISASLGVLDTGKWIHSTA 782
Query: 300 RRSGLDCD-VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
+GL D + +G ALVD Y K G +E A +F++M +++ ++W MIS A+NG G+
Sbjct: 783 ESNGLIKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTMISGSAVNGKGESG 842
Query: 359 FDTFREMEAEG-VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
D F M EG V PN TF+G+L+ C+++G VE+G F +M + +EP HY M+
Sbjct: 843 IDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEPRTEHYGAMV 902
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D++SR+G EA +R+MP+ + +WG+LL C+ HG+V+L E A L+ ++P N
Sbjct: 903 DLMSRSGRIREAFEFLRNMPVNANAAMWGSLLSACRSHGDVKLAELAAMELVKIEPGNSG 962
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
YV L ++YA+ GR+ DV+K R LMK+ +RK
Sbjct: 963 NYVLLSNLYAEEGRWQDVEKVRTLMKKNCLRK 994
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 280/557 (50%), Gaps = 76/557 (13%)
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACK------------SSETNDTHSGKC 121
AL+VS SL+ A +F + D TYN+MI ++A + E +
Sbjct: 109 ALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGM 168
Query: 122 LKLY---------KQMLCTGISPDCLTFPFLL------------KECTKRLDG------- 153
L Y + + + D +++ L+ +E R+ G
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWN 228
Query: 154 --LVGASVYGQVVKF------GVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
+ G + G +V+ DVF +V+S + G + AR +FD M R+ VS
Sbjct: 229 IMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVS 288
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM----- 260
WNAM+ Y++ +D A +LF M RN+ SWN+++TG+ Q G EA +F M
Sbjct: 289 WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDA 348
Query: 261 -----------QSSSVEEMVK-----------PDKITIASVLSACAYLGAIDHGKWVHGY 298
Q EE ++ ++ A VLS CA + A++ G +HG
Sbjct: 349 VSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGR 408
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
L R+G +G AL+ MY KCG +E A F+EM ++D ++W MI+ +A +G+GKEA
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
+ F M +P+ +T VG+L+AC+HSGLVEKG F M H + V HY CMID
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+L RAG +EA L++ MP EPD +WGALLG ++H N ELG A+ + +L+P N
Sbjct: 529 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGM 588
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
YV L ++YA +G++ D +K R +M+ERG++K VPG S +EV VH FS KE+
Sbjct: 589 YVLLSNIYASSGKWRDARKMRVMMEERGVKK-VPGFSWIEVQNKVHTFSAGDCVHPEKEK 647
Query: 539 LVLILNGLSKIMKNGGF 555
+ L L MK G+
Sbjct: 648 IYAFLEDLDMRMKKAGY 664
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 162/365 (44%), Gaps = 59/365 (16%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M E KE+ + PC ++++T + +G L A VF + + D ++
Sbjct: 302 MDEAKELFNMM---PCRNVASWNTMLT------GYAQAGMLEEAKAVFDTMPQKDAVSWA 352
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
M+ ++ + S + L+L+ +M G + F +L C G ++
Sbjct: 353 AML------AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLH 406
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G++++ G FV N++++++ CG + AR F+EM RDVVSWN MI GY R
Sbjct: 407 GRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH---- 462
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
G +EALE+F M+++S KPD IT+ VL
Sbjct: 463 ---------------------------GFGKEALEIFDMMRTTS----TKPDDITLVGVL 491
Query: 281 SACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKD 338
+AC++ G ++ G + + G+ T ++D+ G+ G + A+ + K+MP + D
Sbjct: 492 AACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 551
Query: 339 TLAWTAMISVFALN---GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+ W A++ ++ G+ A + E+E E N +V L + A SG R
Sbjct: 552 STMWGALLGASRIHRNPELGRSAAEKIFELEPE----NAGMYVLLSNIYASSGKWRDARK 607
Query: 396 CFVMM 400
VMM
Sbjct: 608 MRVMM 612
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 145/372 (38%), Gaps = 93/372 (25%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNR----------------------------- 201
D + N+++ + AR LFDEM R
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158
Query: 202 --DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
D VSWN M+ Y+R+G ++ A LF + ++ SWN++++G+VQ G+ EA ELF
Sbjct: 159 EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDR 218
Query: 260 MQSSSV-------------EEMVKP----------DKITIASVLSACAYLGAIDHGK--- 293
M V +MV+ D T +V+S A G ++ +
Sbjct: 219 MPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVF 278
Query: 294 ----------W---VHGYLRRSGLD----------C-DVVIGTALVDMYGKCGCVERAYG 329
W V Y++R +D C +V ++ Y + G +E A
Sbjct: 279 DAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKA 338
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF MP+KD ++W AM++ ++ G +E F EM G N F +LS CA
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYAC-----MIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+E G M H L+ Y C ++ + + G +A M E DV
Sbjct: 399 LECG-----MQLHGRLIRAG-YGVGCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVVS 451
Query: 445 WGALLGGCQMHG 456
W ++ G HG
Sbjct: 452 WNTMIAGYARHG 463
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 142/330 (43%), Gaps = 37/330 (11%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+V N I+ M G V A LF M R ++NAM+ GY +G L +A LFR +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM---QSSSVEEMV------------------ 269
+ + +S+N+++ +A LF EM S + M+
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 270 --KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
+ D ++ +L+A G ++ + L S + DV+ AL+ Y + G + A
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEAR----GLFNSRTEWDVISWNALMSGYVQWGKMSEA 212
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
+F MP +D ++W M+S +A G EA F +A VR + T+ ++S A +
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF---DAAPVR-DVFTWTAVVSGYAQN 268
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
G++E+ R F M E + + M+ + + EA+ L MP +V W
Sbjct: 269 GMLEEARRVFDAM-----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNT 322
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
+L G G +E + V + D ++ A
Sbjct: 323 MLTGYAQAGMLEEAKAVFDTMPQKDAVSWA 352
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 13/204 (6%)
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
L+ +V+ + + + G V A +F MP++ T + AM++ ++ NG A FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
+ RP++ ++ LL A A S + R F M V V Y MI +
Sbjct: 94 AIP----RPDNYSYNTLLHALAVSSSLADARGLFDEMP----VRDSVT-YNVMISSHANH 144
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
GL S A P E D W +L +G VE + + D ++ + L
Sbjct: 145 GLVSLARHYFDLAP-EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVIS---WNALM 200
Query: 484 DMYAKAGRFDDVKKTRNLMKERGI 507
Y + G+ + ++ + M R +
Sbjct: 201 SGYVQWGKMSEARELFDRMPGRDV 224
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 295/548 (53%), Gaps = 51/548 (9%)
Query: 16 PAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCAL 75
P V+ L+L++ ++ECK+M +LK+IH ++S + L +R+L F +L
Sbjct: 11 PQIVTSKPTNHYNLLLQH-LNECKDMSQLKQIHALSLRSTLPNHSTTLFLYSRILHFSSL 69
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGIS 134
L+YA VF + + + +NI+IRA C S++ L LY ML +
Sbjct: 70 H---DLNYAYRVFDQVDNPNSFMWNILIRA--CAQSQSVHLKREAIL-LYNTMLQRSSPF 123
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
PD TFPF+LK C G + ++K G DV++ NS+I + +CG
Sbjct: 124 PDNHTFPFVLKACAYLFALFEGKQAHAHLLKLGFQSDVYINNSLIHFYASCG-------- 175
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
L+ A ++F +M +R++ SWN++I FV G AL
Sbjct: 176 -----------------------SLESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETAL 212
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDC---DVVI 310
+LF + Q E PD TI SV++ACA L A+ G W H +L R+ G+ V++
Sbjct: 213 QLFVQFQQQFFE----PDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLV 268
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM-EAEG 369
+L+DMY KCG ++ A +F+ M K D +W +MI FA++G G+ A + F M
Sbjct: 269 NNSLLDMYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFERMIRISR 328
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
PN +TFVG+LSAC H +V +GR F MM + Y +EP + HY C++DIL+RAGL EA
Sbjct: 329 FVPNSITFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEA 388
Query: 430 ERLIRSMPMEPDVFVWGALLGG-CQMHGNVELGEKVAQYLIDLDPLNHA-FYVNLCDMYA 487
L+ SMPM+PDV +W +LL C+ + +VEL E +A+ +++ + + + YV L +YA
Sbjct: 389 LELVASMPMKPDVVIWRSLLDSCCKKNASVELSENIARQILESEEADSSGVYVLLSRVYA 448
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
A R++DV R LM GI KE PGCS +EVDGV HEF + +E+ +LN +
Sbjct: 449 SASRWNDVGLVRKLMTNNGILKE-PGCSLIEVDGVTHEFFAGDTSHPQTKEIYQVLNVVE 507
Query: 548 KIMKNGGF 555
+ + + G+
Sbjct: 508 ERIDSTGY 515
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 179/513 (34%), Positives = 273/513 (53%), Gaps = 52/513 (10%)
Query: 46 EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS-DLYTYNIMIR 104
++H + +K P +N H ++T LL A G L A F +++ ++ +I
Sbjct: 96 QLHARSLKLPS-HSNPH--VLTSLLNLYARC--GRLHDAQKAFDEMRQPPSTVSWTALIT 150
Query: 105 A--NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
A +A + E + + + +G+ PD T +L C + D + G V+
Sbjct: 151 AYMDAGRGLE--------AIGVARSAFASGVRPDSFTAVRVLTACARVADLVTGEEVWTA 202
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
K G+ +VFV + + L++ CG ++D A
Sbjct: 203 AEKEGIAGNVFVATAAVDLYVKCG-------------------------------EMDKA 231
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
+F +MK +++ +W +++ G+ G REALELF MQ VE M +PD T+A LSA
Sbjct: 232 RGVFDKMKNKDVVAWGAMVGGYASNGHPREALELFFAMQ---VEGM-RPDCYTVAGALSA 287
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
C LGA+D G+ V G L+ + + V+GTAL+DMY KCG A+ VF++M +D + W
Sbjct: 288 CTRLGALDLGRRVVGMLQWDEVLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVW 347
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
AMI + G+ K AF +M+ G+ N TF+GLL +C H+GLV+ GR F M
Sbjct: 348 NAMILGLGMTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQ 407
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
+Y + P + HY M+D+LSRAGL EA +LI+ MPME + VWGALLGGC++H N +L E
Sbjct: 408 LYHIRPRIEHYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIHRNADLAE 467
Query: 463 KVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGV 522
V + LI L+P N YV L ++Y+ +GR++D K R MK +G+ K VP S VE+DG
Sbjct: 468 HVLKQLIQLEPWNSGNYVVLSNIYSNSGRWEDAAKLRLEMKAKGVEK-VPASSWVELDGK 526
Query: 523 VHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
VHEF + + +++ L+ L MK G+
Sbjct: 527 VHEFHVGDKSHPLSDQIYAKLDELGMEMKAMGY 559
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 175/486 (36%), Positives = 267/486 (54%), Gaps = 47/486 (9%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
+RE KE+H I+K D + L S SG VF + ++ ++
Sbjct: 144 LREGKEVHCNIVK----HGFDSDVFVQSSLV-AMYSQSGETLGMELVFGEMVVRNIVSWT 198
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
+I + + + + L ++++M+ +G P+ +T +L C +G ++
Sbjct: 199 AVI------AGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIH 252
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G +K GV DV + N++I+L+ C G+++
Sbjct: 253 GYGIKLGVDPDVSLTNALIALYGKC-------------------------------GNVE 281
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A LF M +N+ SWN++I + Q A++LF+ MQ+ E V D IT+ SV+
Sbjct: 282 TARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQA----EKVDFDYITMVSVI 337
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
SACA LGA++ G+W+H ++R GL+ +V I AL+DMY KCG ++ A VF+ +P + +
Sbjct: 338 SACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVV 397
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+WT+MI A +G+G++A F M+ EGV+PN TF + +AC HSGLVE+GR F M
Sbjct: 398 SWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESM 457
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
Y + P V H ACM+D+L RAG EA I MP+EPDV VWGALLG C++H N+EL
Sbjct: 458 MRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLEL 517
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVD 520
E VA+ L LDP FYV + ++YA+AGR++D + R LM+ER ++K +PG S VEV+
Sbjct: 518 AELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKK-IPGHSLVEVN 576
Query: 521 GVVHEF 526
H F
Sbjct: 577 RRFHTF 582
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 215/436 (49%), Gaps = 53/436 (12%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C ++ +L IH ++ + C Q + L++ L A ++ ++ YA +F + + D++
Sbjct: 39 CSSLPDLSRIHALVVTNGCGQ----NLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVF 94
Query: 98 TYNIMIRANACKSSETNDTHSGKC---LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+N +IR A +G C L LY M G+ PD TFPF+++ C
Sbjct: 95 LWNTLIRGYA---------DAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALR 145
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G V+ +VK G DVFVQ+S+++++ G ++F EM R++VSW A+I GY
Sbjct: 146 EGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGY- 204
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
VQ +E L +F+EM S + P+ +
Sbjct: 205 ------------------------------VQNRYFKEGLGVFREMVGSGTQ----PNAV 230
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ SVL ACA L ++ GK +HGY + G+D DV + AL+ +YGKCG VE A +F M
Sbjct: 231 TLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGM 290
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
++ ++W AMI+ + N G A FR M+AE V +++T V ++SACA G + GR
Sbjct: 291 VVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGR 350
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
W +++ L E +V +ID+ ++ G A + +P V W +++G C
Sbjct: 351 WMHELVKRKGL-EINVSITNALIDMYAKCGNIDLAREVFERLPCR-SVVSWTSMIGACAS 408
Query: 455 HGNVELGEKVAQYLID 470
HG+ E K+ + D
Sbjct: 409 HGHGEDALKLFSRMKD 424
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 164/384 (42%), Gaps = 60/384 (15%)
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS---ARMLF 195
+F +LL C+ D + ++ VV G ++ + +I AC + AR +F
Sbjct: 31 SFNYLLNCCSSLPDL---SRIHALVVTNGCGQNLLLSTKLI--ITACCLAPTMDYARKMF 85
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D+M RDV WN +I GY +G + AL L+ M +F
Sbjct: 86 DQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLF-------------------- 125
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
PD T V+ +CA L A+ GK VH + + G D DV + ++LV
Sbjct: 126 ---------------PDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLV 170
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
MY + G VF EM ++ ++WTA+I+ + N Y KE FREM G +PN V
Sbjct: 171 AMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAV 230
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVY----LVEPHVYHYACMIDILSRAGLFSEAER 431
T V +L ACA + G+ + H Y V+P V +I + + G A
Sbjct: 231 TLVSVLPACAGLEFLNLGK-----LIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARS 285
Query: 432 LIRSMPMEPDVFVWGALLGGCQMH----GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
L M ++ ++ W A++ + + V+L ++ +D D + ++ C A
Sbjct: 286 LFDGMVVQ-NLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISAC---A 341
Query: 488 KAGRFDDVKKTRNLMKERGIRKEV 511
G + + L+K +G+ V
Sbjct: 342 SLGALNTGRWMHELVKRKGLEINV 365
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 280/499 (56%), Gaps = 50/499 (10%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSS--ETNDTHSGKC 121
SL++ L F +S +S++T + ++I ++ ++ A + ND G+
Sbjct: 159 SLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGE- 217
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ-----VVKFGVCDDVFVQN 176
+L+ +M+ + P+ +T L+ C G VGA G+ +++ G + +
Sbjct: 218 -RLFVRMIEENVFPNDITMLSLIISC-----GFVGAVQLGKRLHAYILRNGFGMSLALAT 271
Query: 177 SVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFS 236
+++ ++ CG + SAR +FD MK +++ +
Sbjct: 272 ALVDMYGKCGEIRSARAIFDS-------------------------------MKNKDVMT 300
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
W ++I+ + Q A +LF +M+ + V +P+++T+ S+LS CA GA+D GKW H
Sbjct: 301 WTAMISAYAQANCIDYAFQLFVQMRDNGV----RPNELTMVSLLSLCAVNGALDMGKWFH 356
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
Y+ + G++ DV++ TAL+DMY KCG + A +F E +D W M++ + ++GYG+
Sbjct: 357 AYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGE 416
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
+A F EME GV+PN +TF+G L AC+H+GLV +G+ F M H + + P V HY CM
Sbjct: 417 KALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCM 476
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
+D+L RAGL EA ++I SMP+ P++ +WGA+L C++H N +GE A+ L+ L+P N
Sbjct: 477 VDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNC 536
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVK 536
+ V + ++YA A R++DV R +K+ GI+KE PG SS+EV+G+VH+F M + +
Sbjct: 537 GYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKE-PGMSSIEVNGLVHDFKMGDTAHPLI 595
Query: 537 EELVLILNGLSKIMKNGGF 555
E++ +L +SK +K G+
Sbjct: 596 EKISEMLAEMSKKLKEAGY 614
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 197/364 (54%), Gaps = 26/364 (7%)
Query: 115 DTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV 174
++H L Y M I D P +LK C++ +G ++G VK G+ DVFV
Sbjct: 87 ESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFV 146
Query: 175 QNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
N+++ ++ CG + SAR+LFD+MS RDVVSW+ MI Y+ LF +R+I
Sbjct: 147 VNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYI---------TLFYGFSQRSI 197
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
SW ++I G+++ E LF M +EE V P+ IT+ S++ +C ++GA+ GK
Sbjct: 198 VSWTAMIAGYIRCNDLEEGERLFVRM----IEENVFPNDITMLSLIISCGFVGAVQLGKR 253
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
+H Y+ R+G + + TALVDMYGKCG + A +F M KD + WTAMIS +A
Sbjct: 254 LHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANC 313
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL----VEPHV 410
AF F +M GVRPN +T V LLS CA +G ++ G+W H Y+ VE V
Sbjct: 314 IDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWF-----HAYIDKQGVEVDV 368
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
+ID+ ++ G S A+RL S ++ D+ W ++ G MHG GEK + +
Sbjct: 369 ILKTALIDMYAKCGDISGAQRLF-SEAIDRDICTWNVMMAGYGMHG---YGEKALKLFTE 424
Query: 471 LDPL 474
++ L
Sbjct: 425 METL 428
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 171/478 (35%), Positives = 268/478 (56%), Gaps = 45/478 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF + R DL + MI A + + + + +Y+QM + D +
Sbjct: 154 GKMDEAMRVFDKMGRRDLVCWTTMITGLA------QNGQAREAVDIYRQMHKKRVEGDGV 207
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
L++ CT +G S++G +++ + DV VQ S++ +
Sbjct: 208 VMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDM----------------- 250
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
Y ++G L++A +FRRM +N+ SW+++I+GF Q G A AL+L
Sbjct: 251 --------------YAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVV 296
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL-RRSGLDCDVVIGTALVDM 317
+MQS KPD +++ SVL AC+ +G + GK VHGY+ RR DC V TA++DM
Sbjct: 297 DMQSFGY----KPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDC--VSSTAVIDM 350
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG + A VF ++ +D+++W A+I+ + ++G G+EA F +M V+P+H TF
Sbjct: 351 YSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATF 410
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
LLSA +HSGLVEKGR+ F +M + Y ++P HYACM+D+LSRAG EA+ LI SM
Sbjct: 411 ASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMI 470
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
EP + +W ALL GC HG +GE A+ +++L+P + Y + + +A A R+D+V +
Sbjct: 471 TEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAE 530
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R +MK+ G++K VPG S +EV+G +H F M+ EE++ +L L MK G+
Sbjct: 531 VRKIMKKTGMKK-VPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGY 587
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 168/388 (43%), Gaps = 86/388 (22%)
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR----- 232
+I + G + SAR +FD+ V +WNAMII Y R G + AL L+ RM
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104
Query: 233 ----------------------------------NIFSWNSIITGFVQGGRAREALELFQ 258
++F +++ + + G+ EA+ +F
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFD 164
Query: 259 EM----------------QSSSVEEM-----------VKPDKITIASVLSACAYLGAIDH 291
+M Q+ E V+ D + + ++ AC LG
Sbjct: 165 KMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKM 224
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
G +HGY+ R + DV++ T+LVDMY K G +E A VF+ M K+ ++W+A+IS FA
Sbjct: 225 GLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQ 284
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
NG+ A +M++ G +P+ V+ V +L AC+ G ++ G+ H Y+V
Sbjct: 285 NGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSV-----HGYIVRR--L 337
Query: 412 HYAC-----MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
H+ C +ID+ S+ G S A + + D W A++ +HG+ GE+
Sbjct: 338 HFDCVSSTAVIDMYSKCGSLSFARTVFDQISFR-DSISWNAIIASYGIHGS---GEEALS 393
Query: 467 YLIDLDPLN----HAFYVNLCDMYAKAG 490
+ + N HA + +L ++ +G
Sbjct: 394 LFLQMRETNVKPDHATFASLLSAFSHSG 421
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 26/171 (15%)
Query: 62 HHSLITRLLFFCALSVS--------GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSET 113
H ++ RL F C S + GSLS+A VF I D ++N +I + S
Sbjct: 330 HGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGS-- 387
Query: 114 NDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF 173
+ L L+ QM T + PD TF LL + GLV Y + + ++
Sbjct: 388 ----GEEALSLFLQMRETNVKPDHATFASLLSAFSH--SGLVEKGRYWFSI---MVNEYK 438
Query: 174 VQNS------VISLFMACGFVTSARMLFDEM-SNRDVVSWNAMIIGYLRSG 217
+Q S ++ L G V A+ L + M + + W A++ G L G
Sbjct: 439 IQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHG 489
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 250/429 (58%), Gaps = 13/429 (3%)
Query: 135 PDCLTFPFLLKECTKRLDGLVG--------ASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
PD +F FL++ T SV+ ++ G D VQ+ +S++ A G
Sbjct: 192 PDNYSFTFLVRAATALAAAAASALDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAG 251
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
V +AR F E+++ DVV AM+ G+ D A +LF M +R+ +WN++I G+V
Sbjct: 252 DVGAARAAFAEIASPDVVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVH 311
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC 306
GR+REAL LF EM+ + ++T+ S L+ACA LGA++ GKWVH G+
Sbjct: 312 TGRSREALRLFDEMRHAGAAV----GEVTLVSALTACAQLGALERGKWVHSCAHSRGMRL 367
Query: 307 DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME 366
V +GTAL+DMY KCG V A VF M +++ WT+ +S A+NG G++ F+ ME
Sbjct: 368 SVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRME 427
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLF 426
+ GV PN VTFV +L C+ +GLV++GR CF M+ + ++P + HY CM+D+ RAG
Sbjct: 428 STGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRL 487
Query: 427 SEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
+A I MP+EP VWGALL ++H NVELG+ L+ ++ N A +V L ++Y
Sbjct: 488 DDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIY 547
Query: 487 AKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
A + + V RN+MK +G++K VPGCS++EV G VHEF + G +E+ ++L +
Sbjct: 548 ADSQNWKGVSNVRNMMKAKGVKK-VPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEM 606
Query: 547 SKIMKNGGF 555
++ ++ G+
Sbjct: 607 NQRLRLQGY 615
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 176/512 (34%), Positives = 271/512 (52%), Gaps = 23/512 (4%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
K+ R ++H + KSP + S + + C A VF + ++ +
Sbjct: 906 KDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWP-----EEARRVFEAMPERNIVS 960
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
+N +I + + G+ L L+ M+ G PD +T ++ C G
Sbjct: 961 WNSLI------TCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQ 1014
Query: 159 VYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
V+ +VVK +D+ + N+++ ++ CG +AR +FD M++R VVS ++I GY RS
Sbjct: 1015 VHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSA 1074
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
+++ A +F +M ++N+ +WN +I + Q G EAL LF ++ E V P T
Sbjct: 1075 NVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLK----RESVWPTHYTYG 1130
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGL------DCDVVIGTALVDMYGKCGCVERAYGVF 331
+VL+AC + + G+ H ++ + G + DV +G +LVDMY K G ++ VF
Sbjct: 1131 NVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVF 1190
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+ M +D ++W AMI A NG K+A F M P+ VT +G+LSAC HSGLVE
Sbjct: 1191 ERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVE 1250
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+GR F M + + P HY CMID+L RAG E E LI+ M MEPD +W +LLG
Sbjct: 1251 EGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGS 1310
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C++H NVE+GE A L +LDP N YV L +MYA+ G++ DV + R+ MK RG+ K+
Sbjct: 1311 CRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQ- 1369
Query: 512 PGCSSVEVDGVVHEFSMKGSPKVVKEELVLIL 543
PGCS +E+ V F + + K E+ IL
Sbjct: 1370 PGCSWIEIGRKVSVFLARDNGHPCKNEIHAIL 1401
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 198/416 (47%), Gaps = 41/416 (9%)
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS 134
L+ G ++ A VF +K +L ++N M+ T L L++QM
Sbjct: 328 LASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTG------ALLLFQQMRQETRE 381
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
D +T +L CT LD G V+ +K G ++N+++ ++ CG + SA L
Sbjct: 382 FDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERL 441
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
LF +R+ +SWNS+I+G+ + + AL
Sbjct: 442 L-----------------------------LFEMGSERDSYSWNSLISGYERHSMSEAAL 472
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
+MQS V P++ T +S L+ACA + + G +H Y+ R G + D ++ + L
Sbjct: 473 YALTKMQSE-----VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVL 527
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+DMY KC + + +F+ P +D + W +MI A +G G+ D F EM+ +G++ +
Sbjct: 528 IDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADS 587
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
VTF+G L +C G V GR F +M ++ P + HY CMI++L + G E E +
Sbjct: 588 VTFLGALVSCISEGHVRLGRSYFTLMMDESII-PRIEHYECMIELLGKHGCMVELEDFVE 646
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
MP EP +W + C+ +GN +LGE+ A+ + D +PL +V D + G
Sbjct: 647 HMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQFVATVDYESNDG 702
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 216/447 (48%), Gaps = 34/447 (7%)
Query: 24 KESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS--- 80
K++T + + EC ++ +++H I K Q+N +L + V G+
Sbjct: 150 KDATMASVLSCCAECLDLCGARQLHGHIAKRD-FQSN-------VILGTALVDVYGNCFL 201
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
L+ A F I + ++N+++R + ++ +ML G+ P T
Sbjct: 202 LADARRAFDDILEPNAISWNVIVRRYHLAG------MGDMAVDMFFRMLSAGVRPLGYTV 255
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
+ C G ++ V++ G V V++SV+ ++ CG + +A+ LF+
Sbjct: 256 SHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPM 315
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
+D+V +++ G G + A +F MK+RN+ SWN+++TG+++ AL LFQ+M
Sbjct: 316 KDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQM 375
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
+ +E + D IT+ SVLSAC + I G+ VH + + G ++ ALV MY K
Sbjct: 376 R----QETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSK 431
Query: 321 CGCVERAYG--VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
CGC+ A +F+ ++D+ +W ++IS + + + A +M++E V PN TF
Sbjct: 432 CGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFS 490
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAGLFSEAERLIR 434
L+ACA+ L+++G M H Y++ E + +ID+ + F + R+
Sbjct: 491 SALAACANIFLLKQG-----MQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFE 545
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELG 461
+ P DV +W +++ GC G E G
Sbjct: 546 ARPSR-DVILWNSMIFGCAYSGKGEYG 571
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 180/443 (40%), Gaps = 98/443 (22%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRA-------------------------NACKSSET 113
G L A VF I + ++YN ++ A NA ++
Sbjct: 809 GRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALA 868
Query: 114 NDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF 173
+ L M + +F L C D G V+ V K DV+
Sbjct: 869 QHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVY 928
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRN 233
+ ++++ ++ C + AR +F+ M R++VSWN++I Y ++G + AL LF M K
Sbjct: 929 IGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMK-- 986
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
GFV PD++T+ASV+SACA L A G+
Sbjct: 987 --------AGFV-------------------------PDEVTLASVMSACAGLAADREGR 1013
Query: 294 WVHGYLRRSG-LDCDVVIGTALVDMYGKCG------C----------------------- 323
VH + +S D+V+ ALVDMY KCG C
Sbjct: 1014 QVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARS 1073
Query: 324 --VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
VE A VF +M +K+ +AW +I+ +A NG +EA F ++ E V P H T+ +L
Sbjct: 1074 ANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVL 1133
Query: 382 SACAHSGLVEKGRWCFVMM-----RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
+AC + ++ G+ V + R + E V+ ++D+ + G + ++ M
Sbjct: 1134 NACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM 1193
Query: 437 PMEPDVFVWGALLGGCQMHGNVE 459
+V W A++ G +G +
Sbjct: 1194 AARDNV-SWNAMIVGHAQNGRAK 1215
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 137/294 (46%), Gaps = 39/294 (13%)
Query: 172 VFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
F+ N I ACG V AR LFD M LR G
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMP--------------LRDGG------------- 117
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
SWN+IIT + G EAL LF M S + +P T+ASVLS CA +
Sbjct: 118 ----SWNAIITASSRAGHPSEALSLFSNMNSLGI----RPKDATMASVLSCCAECLDLCG 169
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
+ +HG++ + +V++GTALVD+YG C + A F ++ + + ++W ++ + L
Sbjct: 170 ARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHL 229
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHVYLVEPHV 410
G G A D F M + GVRP T + AC + +E+GR ++RH Y E HV
Sbjct: 230 AGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGY--EHHV 287
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
+ + ++D+ ++ G A+ L PM+ D+ + +++ G G + ++V
Sbjct: 288 HVRSSVVDMYAKCGAMDAAQSLFNLAPMK-DMVMSTSIVSGLASCGRIADAKRV 340
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 173/407 (42%), Gaps = 76/407 (18%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+ F+ N+++S + G + AR +FDE+ + + S+NA++ + R G A LF +
Sbjct: 794 ETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIP 853
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+ S+N++I Q R +AL M + ++ V + + AS LSACA
Sbjct: 854 DPDQCSYNAVIAALAQHSRGADALLFLAAMHA---DDFVL-NAYSFASALSACAAEKDSR 909
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G VH + +S DV IG+AL+DMY KC E A VF+ MP+++ ++W ++I+ +
Sbjct: 910 TGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYE 969
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA-----------HSGLVEKGRWCFVM 399
NG EA F M G P+ VT ++SACA H+ +V+ R+ M
Sbjct: 970 QNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDM 1029
Query: 400 MRHVYLVEPH-----VYHYACMIDILSRAGLFSEAE--------------RLIRSMPMEP 440
+ LV+ + C+ D ++ + SE +++ S +E
Sbjct: 1030 VLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEK 1089
Query: 441 DVFVW-----------------------------------GALLGGCQMHGNVELGEKVA 465
+V W G +L C +++LG++
Sbjct: 1090 NVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAH 1149
Query: 466 QYLI------DLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRNLMKER 505
+++ D P + F N L DMY K G DD K M R
Sbjct: 1150 VHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR 1196
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 179/422 (42%), Gaps = 82/422 (19%)
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGI 133
+L+ GS++ A +F + D ++N +I A+ + H + L L+ M GI
Sbjct: 94 SLAACGSVADARELFDLMPLRDGGSWNAIITAS------SRAGHPSEALSLFSNMNSLGI 147
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
P T +L C + LD ++G + K +V + +++ ++ C + AR
Sbjct: 148 RPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARR 207
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
FD++ + +SWN ++ Y +G D+A+D+F RM
Sbjct: 208 AFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRM------------------------ 243
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
+ V+P T++ + AC A++ G+ +H ++ R G + V + ++
Sbjct: 244 -----------LSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSS 292
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA----------------------- 350
+VDMY KCG ++ A +F P KD + T+++S A
Sbjct: 293 VVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSW 352
Query: 351 ---LNGYGKE-----AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
L GY + A F++M E + +T +LSAC +G+++ G+ V H
Sbjct: 353 NAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSAC--TGILDIGKGEEV---H 407
Query: 403 VYLVEPHVYHYA----CMIDILSRAGLFSEAERLIR-SMPMEPDVFVWGALLGGCQMHGN 457
+ ++ + ++ + S+ G AERL+ M E D + W +L+ G + H
Sbjct: 408 AFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSM 467
Query: 458 VE 459
E
Sbjct: 468 SE 469
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 242/412 (58%), Gaps = 29/412 (7%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DVF +++S F+ G + A +F+EM ++ VSWNAMI GY++S ++ A +LF +M
Sbjct: 276 DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMP 335
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM----------------QSSSVEEMV----- 269
RN SWN+++TG+ Q G +A LF EM QS EE +
Sbjct: 336 SRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIK 395
Query: 270 -KPD-----KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
K D + +A LS+CA + A++ GK +HG L ++G + G AL+ MYGKCG
Sbjct: 396 MKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGS 455
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
+E A+ VF+++ +KD ++W MI+ +A +G+GKEA F M+ ++P+ VT VG+LSA
Sbjct: 456 IEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSA 514
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+H+G V+KG F M Y + + HY CMID+L RAG EA L++SMP PD
Sbjct: 515 CSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAA 574
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
WGALLG ++HG+ ELGEK A+ + +++P N YV L ++YA +GR+ +V++ R+ M+
Sbjct: 575 TWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMR 634
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
++G++K VPG S VE+ H F++ E + L L +K GF
Sbjct: 635 DKGVKK-VPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGF 685
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 45/311 (14%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
N++IS +++ AR +F++M +RD++SWN M+ GY+++G+L A LF +M ++++
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK-- 293
SWN++++GF Q G EA ++F +M +VK ++I+ +LSA G I+ +
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQM-------LVK-NEISWNGLLSAYVQNGRIEDARRL 206
Query: 294 ------W--------VHGYLRRSGLDC-----------DVVIGTALVDMYGKCGCVERAY 328
W + GY+R+ LD D + ++ Y + G + A
Sbjct: 207 FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F+E+P +D AWTAM+S F NG EA F EM + N V++ +++ S
Sbjct: 267 RLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQ 322
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+EK R F M + + M+ ++ G +A+ L MP + D W A+
Sbjct: 323 QIEKARELFDQM-----PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAM 376
Query: 449 LGGCQMHGNVE 459
+ G G E
Sbjct: 377 ISGYAQSGQSE 387
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 219/545 (40%), Gaps = 110/545 (20%)
Query: 43 ELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIM 102
E K + I+ S ++ N S R G A +VF+ ++R TYN M
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMR---------KGQCESALSVFNGMRRRSTVTYNAM 97
Query: 103 IRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
I S ++ K++++M D +++ +L K + +++ Q
Sbjct: 98 I------SGYLSNNKFDCARKVFEKM----PDRDLISWNVMLSGYVKNGNLSAARALFNQ 147
Query: 163 -----VVKF-----GVCDDVFVQ-----------------NSVISLFMACGFVTSARMLF 195
VV + G + FV+ N ++S ++ G + AR LF
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLF 207
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D + ++VSWN ++ GY+R LD A LF RM R+ SWN +ITG+ Q G EA
Sbjct: 208 DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARR 267
Query: 256 LFQEMQSSSV-----------------------EEMVKPDKITIASVLSACAYLGAIDHG 292
LF+E+ V EEM + ++++ ++++ I+
Sbjct: 268 LFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKA 327
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+ + + + +V Y +CG +++A +F EMP++D ++W AMIS +A +
Sbjct: 328 RELFDQMPSR----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQS 383
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA-----------HSGLVEKGRWCFVMMR 401
G +EA F +M+ +G N LS+CA H LV+ G +
Sbjct: 384 GQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG 443
Query: 402 HVYL-------------------VEPHVYHYACMIDILSRAGLFSEAERLIRSMPM--EP 440
+ L E + + MI +R G EA L SM M +P
Sbjct: 444 NALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKP 503
Query: 441 DVFVWGALLGGCQMHGNVELGEKV--AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
D +L C G V+ G + + Y N Y + D+ +AGR D+
Sbjct: 504 DDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA--- 560
Query: 499 RNLMK 503
NLMK
Sbjct: 561 LNLMK 565
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 180/408 (44%), Gaps = 70/408 (17%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+ + + + +E+ Q+ P T+ ++++T + G++ A +F + + D
Sbjct: 320 QSQQIEKARELFDQM---PSRNTSSWNTMVT------GYAQCGNIDQAKILFDEMPQRDC 370
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
++ MI S S + L L+ +M G + L C + +G
Sbjct: 371 ISWAAMI------SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELG 424
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++G++VK G N++++++ CG + A +F++++ +D+VSWN MI GY R
Sbjct: 425 KQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARH 484
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G +EAL LF+ M+ + +KPD +T+
Sbjct: 485 -------------------------------GFGKEALALFESMKMT-----IKPDDVTL 508
Query: 277 ASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
VLSAC++ G +D G ++ + + G+ + T ++D+ G+ G ++ A + K MP
Sbjct: 509 VGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMP 568
Query: 336 -KKDTLAWTAMISVFALNG---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
D W A++ ++G G++A + EME + N +V L + A SG
Sbjct: 569 FYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPD----NSGMYVLLSNLYAASGRWR 624
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS-------EAERL 432
+ R MR + + Y + ++I ++ +F+ EAER+
Sbjct: 625 EVREMRSKMRDKGVKKVPGYSW---VEIQNKTHIFTVGDCSHPEAERI 669
>gi|242042285|ref|XP_002468537.1| hypothetical protein SORBIDRAFT_01g047570 [Sorghum bicolor]
gi|241922391|gb|EER95535.1| hypothetical protein SORBIDRAFT_01g047570 [Sorghum bicolor]
Length = 495
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 255/434 (58%), Gaps = 11/434 (2%)
Query: 127 QMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCD-DVFVQNSVISLFMAC 185
+L + + P TFPFL + + + A+++ ++ G+ D+ V NS++ ++ AC
Sbjct: 49 HLLRSSLRPSHFTFPFLARAAARLSSASLAAALHAHPLRLGLLPADLHVANSLVHMYAAC 108
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
A +FDE+ ++VSWNA++ GY + DL A +F RM +R++ SW+++I G V
Sbjct: 109 AMPDHAHRVFDEIPRPNLVSWNALLDGYAKCRDLPAARQVFARMPQRDVVSWSAMIDGCV 168
Query: 246 QGGRAREALELFQEMQSSSVEEM------VKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+ G REAL LF+ M++++ + + + +T+ SVL ACA LG ++ G+WVH L
Sbjct: 169 KCGEHREALALFEMMENAAARSVEDGGGGARANDVTMVSVLGACANLGDLERGRWVHRCL 228
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP--KKDTLAWTAMISVFALNGYGKE 357
R G ++ + T+LVDMY KCG + A +F +P D L W A+I A++G E
Sbjct: 229 RERGFPLNLKLATSLVDMYAKCGAIHEALEMFWAVPVESTDVLIWNAVIGGLAVHGMATE 288
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
+ + F+EM+ GV P+ +T++ LLSAC H GLV++ W F + PHV HYAC++
Sbjct: 289 SVEIFQEMQCAGVAPDEITYLCLLSACVHGGLVDEA-WKFFRSLEAQGLRPHVEHYACLV 347
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
D+L RAG E +++SMPM+P V V GA L C +HG VELGE V + L+ L P +
Sbjct: 348 DVLGRAGRLEEVYGVVKSMPMKPSVSVLGAFLNACHLHGWVELGEVVGRQLVQLQPDHDG 407
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKE 537
Y+ L ++YA A R+ + KK R +M++RG++K VPG S + V G + F+ +
Sbjct: 408 RYIGLSNIYAVARRWQEAKKARKVMEDRGVKK-VPGFSEIHVGGGLSRFTAQDKTHPGSV 466
Query: 538 ELVLILNGLSKIMK 551
E+ +LN ++ MK
Sbjct: 467 EIYDLLNLIAMEMK 480
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 258/449 (57%), Gaps = 23/449 (5%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF + L +N+M+R + L +QM +G++PD +
Sbjct: 98 GRVDIARKVFDEMPSRALVLWNMMVRCY------IRCGRYSAAVALSEQMERSGVTPDRV 151
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF-----VQNSVISLFMACGFVTSARM 193
T + C++ D +G ++ + D+VF V N+++ ++ + A
Sbjct: 152 TLVTAVTACSRARDLSLGRRIHVYM------DNVFGFNLPVANALLDMYTKNDCLEEAVK 205
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LF++M R+++SW ++ GY +G LD A LF + K++++ W ++I VQ G EA
Sbjct: 206 LFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEA 265
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
L LF++MQ VE PD+ T+ ++L+ CA LGA+D G+W+H Y + + D V+GTA
Sbjct: 266 LTLFRDMQMQRVE----PDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTA 321
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
L+DMY KCG +E++ VF M +D AWTA+I A NG A + F++M+ V+P+
Sbjct: 322 LIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPD 381
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
VTF+G+LSAC H GLV++GR F MR VY +EP V HY+C++++L RAGL EAERLI
Sbjct: 382 GVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLI 441
Query: 434 RSMPMEPDVF-VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
+P+ D ++GALL C+ HGNVE+ E++ + + + D + + ++YA A R+
Sbjct: 442 GDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRW 501
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
+DV + R M ++K GCS +EV G
Sbjct: 502 EDVIRVRGKMAHPTVKK-TAGCSLIEVKG 529
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 191/444 (43%), Gaps = 82/444 (18%)
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
L+ N++IR A + S + + +Y + G+ D T+PF+L+ +
Sbjct: 14 LWECNVLIRTLARRGS------FARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVE 67
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G + +K G D + +S++ ++ G V AR +FDEM +R +V WN M+ Y+R
Sbjct: 68 GRKAHAAAIKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIR 127
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
GR A+ L ++M+ S V PD++T
Sbjct: 128 C-------------------------------GRYSAAVALSEQMERSG----VTPDRVT 152
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ + ++AC+ + G+ +H Y+ + ++ + AL+DMY K C+E A +F++MP
Sbjct: 153 LVTAVTACSRARDLSLGRRIHVYM-DNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMP 211
Query: 336 -------------------------------KKDTLAWTAMISVFALNGYGKEAFDTFRE 364
+KD + WTAMI+ +G +EA FR+
Sbjct: 212 ARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRD 271
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
M+ + V P+ T V LL+ CA+ G +++G W + V A +ID+ S+ G
Sbjct: 272 MQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTA-LIDMYSKCG 330
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYV 480
++ + M D W A++ G +G +EL + + + + D + +
Sbjct: 331 HIEKSLEVFWRMQGR-DATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVL 389
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKE 504
+ C G D+ +K + M+E
Sbjct: 390 SAC---CHGGLVDEGRKQFHAMRE 410
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 7/263 (2%)
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
+A+ RR ++ N +I + G + ++ ++++ + D T VL
Sbjct: 1 MAMAAARRGHGMPLWECNVLIRTLARRGSFARVMAVYYDLRARGL----VADSFTYPFVL 56
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
A L G+ H ++G D G++L++MY G V+ A VF EMP + +
Sbjct: 57 RAVGVLKLSVEGRKAHAAAIKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALV 116
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
W M+ + G A +ME GV P+ VT V ++AC+ + + GR V M
Sbjct: 117 LWNMMVRCYIRCGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYM 176
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+V+ V + ++D+ ++ EA +L MP ++ W L+ G + G ++
Sbjct: 177 DNVFGFNLPVAN--ALLDMYTKNDCLEEAVKLFEQMPAR-NIISWTILVSGYGLAGQLDK 233
Query: 461 GEKVAQYLIDLDPLNHAFYVNLC 483
+ + D + +N C
Sbjct: 234 ARVLFNQCKEKDLILWTAMINAC 256
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 284/518 (54%), Gaps = 53/518 (10%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A+ +F + D+ ++N MI S ++ + + L +YKQM+ GI D T +
Sbjct: 204 ASELFDKLCDRDVISWNSMI------SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISV 257
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
L C +G +V+ +K + N+++ ++ CG + A +F++M R+V
Sbjct: 258 LVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKR------------------------------- 232
VSW +MI GY R G D A+ L ++M+K
Sbjct: 318 VSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 377
Query: 233 --------NIFSWNSIITGFVQGGRAREALELFQEMQSSSV---EEMV---KPDKITIAS 278
N+F N+++ + + G A +F M + MV KPD T+A
Sbjct: 378 IKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMAC 437
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
+L ACA L A++ GK +HGY+ R+G D + ALVD+Y KCG + A +F +P KD
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++WT MI+ + ++GYG EA TF EM G+ P+ V+F+ +L AC+HSGL+E+G F
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 557
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+M++ + +EP + HYACM+D+LSR G S+A + I ++P+ PD +WGALL GC+++ ++
Sbjct: 558 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDI 617
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
EL EKVA+ + +L+P N +YV L ++YA+A + ++VK+ R + ++G+RK PGCS +E
Sbjct: 618 ELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKN-PGCSWIE 676
Query: 519 VDGVVHEF-SMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ G V+ F S S +++ +L + + MK G+
Sbjct: 677 IKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGY 714
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 181/400 (45%), Gaps = 47/400 (11%)
Query: 129 LCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFV 188
+C + T+ +L+ C G V+ + V D + ++S + CG +
Sbjct: 91 MCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDL 150
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDL--------------------DVALDLFRR 228
R +FD M ++V WN M+ Y + GD + A +LF +
Sbjct: 151 KEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDK 210
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
+ R++ SWNS+I+G+V G L ++++M ++ D TI SVL CA G
Sbjct: 211 LCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID----VDLATIISVLVGCANSGT 266
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
+ GK VH +S + + L+DMY KCG ++ A VF++M +++ ++WT+MI+
Sbjct: 267 LSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAG 326
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL--- 405
+ +G+ A ++ME EGV+ + V +L ACA SG ++ G+ H Y+
Sbjct: 327 YTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV-----HDYIKAN 381
Query: 406 -VEPHVYHYACMIDILSRAGLFSEAERLIRSM-------------PMEPDVFVWGALLGG 451
+ +++ ++D+ ++ G A + +M ++PD +L
Sbjct: 382 NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPA 441
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAG 490
C +E G+++ Y++ + N L D+Y K G
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKR----SDLYTYNIMIRANA-CKSSE-TNDTHSG 119
IT +L CA S GSL +V +IK S+L+ N ++ A C S E N S
Sbjct: 355 ITSILHACARS--GSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFST 412
Query: 120 KCLK--LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS 177
+K + + + PD T +L C G ++G +++ G D V N+
Sbjct: 413 MVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANA 472
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
++ L++ CG + AR+LFD + ++D+VSW MI GY
Sbjct: 473 LVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGY------------------------ 508
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
G EA+ F EM+ + +E PD+++ S+L AC++ G ++ G W
Sbjct: 509 -------GMHGYGNEAIATFNEMRDAGIE----PDEVSFISILYACSHSGLLEQG-WRFF 556
Query: 298 YLRRSGLDCDVVIG--TALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
Y+ ++ + + + +VD+ + G + +AY + +P D W A++
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 608
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 118/315 (37%), Gaps = 67/315 (21%)
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+ V +NA I+ + + GDL+ A+EL
Sbjct: 63 DHQVTDYNAKILHFCQLGDLE-------------------------------NAMELVCM 91
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
Q S +E T SVL CA L ++ GK VH ++ + + D +G LV Y
Sbjct: 92 CQKSELETK------TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYA 145
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR---EMEAEGVRPNHVT 376
CG ++ VF M KK+ W M+S +A G KE+ F+ E EG RP
Sbjct: 146 TCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPE--- 202
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
+ S L +K L + V + MI GL + + M
Sbjct: 203 --------SASELFDK------------LCDRDVISWNSMISGYVSNGLTERGLGIYKQM 242
Query: 437 ---PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRF 492
++ D+ ++L GC G + LG+ V I + N L DMY+K G
Sbjct: 243 MYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDL 302
Query: 493 DDVKKTRNLMKERGI 507
D + M ER +
Sbjct: 303 DGALRVFEKMGERNV 317
>gi|356570151|ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 465
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 264/500 (52%), Gaps = 50/500 (10%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
PP + T L D+C + +LK++H Q+I S + T+ + +RL F CALS G
Sbjct: 11 PPPLQRTLATLALISDKCTTLDQLKQVHAQMIVSAVVATDPFAA--SRLFFSCALSPFGD 68
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
LS A +F R + + +N +IRA TH+ L LY M + + P TF
Sbjct: 69 LSLAFRIFHSTPRPNSFMWNTLIRAQ---------THAPHALSLYVAMRRSNVLPGKHTF 119
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
PFLLK C + V+ V+KFG+ D V ++++ + G SAR +FDE
Sbjct: 120 PFLLKACARVRSFTASQQVHVHVIKFGLDFDSHVVDALVRCYSVSGHCVSARQVFDETPE 179
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
+ W M+ GY Q + EAL LF++M
Sbjct: 180 KISSLWTTMVCGY-------------------------------AQNFCSNEALRLFEDM 208
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS--GLDCDVVIGTALVDMY 318
V E +P T+ASVLSACA G ++ G+ +H +++ GL V++GTALV MY
Sbjct: 209 ----VGEGFEPGGATLASVLSACARSGCLELGERIHEFMKVKGVGLGEGVILGTALVYMY 264
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTF 377
K G + A +F EMP+++ + W AMI GY +A F +M+ EG V PN VTF
Sbjct: 265 AKNGEIAMARRLFDEMPERNVVTWNAMICGLGAYGYVDDALGLFEKMKKEGVVVPNGVTF 324
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
VG+LSAC H+GL++ GR F M+ VY +EP + HY C++D+L R G EA L++ MP
Sbjct: 325 VGVLSACCHAGLIDVGREIFRSMKSVYGIEPKIEHYGCLVDLLGRGGWLLEAVELVKGMP 384
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+ DV + G LL ++ GN E+ E+V + ++ L+P NH +V L +MYA+AG++ +V +
Sbjct: 385 WKADVVILGTLLAASRISGNTEVAERVVKDILALEPQNHGVHVALSNMYAEAGQWQEVLR 444
Query: 498 TRNLMKERGIRKEVPGCSSV 517
R MKE ++K PG S V
Sbjct: 445 LRKTMKEERLKK-APGWSLV 463
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 283/518 (54%), Gaps = 56/518 (10%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS------YATNVFSHIKR 93
N+ L++IH +I + + + +L+ A+S+ G + YA +F+ I +
Sbjct: 13 NLGTLRQIHALMIVN---GFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIPQ 69
Query: 94 SDLYTYNIMIRANACKSSETND-THSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
D + +N IR SS+++D H+ + LY QM + PD TFP +LK CTK
Sbjct: 70 PDTFMWNTYIRG----SSQSHDPVHA---VALYAQMTHRSVKPDNFTFPLVLKACTKLFW 122
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
G+ V+G+V + G +V V+N+++ CG + A +FD+ DVV+W+A+I G
Sbjct: 123 VNTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAG 182
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA---------------------- 250
Y + GDL VA LF M KR++ SWN +IT + + G
Sbjct: 183 YAQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMV 242
Query: 251 ---------REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG-YLR 300
+EALELF EM V E PD++T+ S+LSACA LG D G+ VH +
Sbjct: 243 GGYVLHNLNQEALELFDEM--CEVGEC--PDEVTMLSLLSACADLG--DXGEKVHAKIME 296
Query: 301 RSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
+ ++G ALVDMY KCG + + VF + KD ++W ++I A +G+ +E+
Sbjct: 297 LNKGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLG 356
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
FREM+ V P+ +TFVG+L+AC+H+G V++G F +M++ Y +EP++ H C++D+L
Sbjct: 357 LFREMQRTKVCPDEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDML 416
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
+RAGL EA I SM +EP+ VW +LLG C++HG+VEL ++ + L+ + YV
Sbjct: 417 ARAGLLKEAFDFIASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYV 476
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
L ++YA G +D + R LM + G+ K G S VE
Sbjct: 477 LLSNVYASHGEWDGAENVRKLMDDNGVTK-TRGSSFVE 513
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 267/506 (52%), Gaps = 55/506 (10%)
Query: 26 STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYAT 85
+T + L A+ K++R LK +H I++ D + ++ + A S G L A
Sbjct: 154 ATVIGLTRAVISAKSLRFLKAVHAIGIETGL----DADTSVSNT-WIAAYSKCGELQLAK 208
Query: 86 NVFSHIKRS--DLYTYNIMIRANACKSSETNDTHSGK---CLKLYKQMLCTGISPDCLTF 140
VF I+++ ++N +I AC + H GK +K YK +LC G PD T
Sbjct: 209 MVFHGIQKTARSSVSWNSLI---ACYA------HFGKYVDAVKSYKGLLCDGFKPDASTI 259
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
LL C + + G ++G + G D+ + N++IS+
Sbjct: 260 ISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISM------------------- 300
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
Y R GD+ A LF M R SW ++I+G+ + GR +AL LF M
Sbjct: 301 ------------YSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAM 348
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
+ E KPD +T+ S++S C GA+ G W+ Y L DVV+ AL+DMY K
Sbjct: 349 E----ETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAK 404
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG + A +F +P + ++WTAMI+ ALNG +EA D F + G+ PN++TF+ +
Sbjct: 405 CGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAV 464
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
L AC H G +EKGR CF+MM Y + P + HY+CMID+L R G EA +I+ MPM+P
Sbjct: 465 LQACCHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKP 524
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
D +WGALLG C++H N+E+GE V++YL +L P +V + ++YA GR+D+V R
Sbjct: 525 DEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRK 584
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEF 526
M+ +RK PG S V+V+G+ H F
Sbjct: 585 TMRSNQMRKS-PGKSVVQVNGMSHVF 609
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 194/493 (39%), Gaps = 101/493 (20%)
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
+L+ N FS K S L +N IR N ++ K L L+ Q+ G+ P+ T
Sbjct: 3 TLTQHLNCFS--KLSTLTWWNSSIRG------AVNQGNASKALALFHQLKLNGLQPNNFT 54
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
FPFL K C K ++ VVK D++VQ +++ +++ C
Sbjct: 55 FPFLSKACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKC-------------- 100
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
G +D A +LF +M RNI SWN++I GF Q G LF
Sbjct: 101 -----------------GKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMG 143
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M+ +PD T+ + A ++ K VH +GLD D + + Y
Sbjct: 144 MRLVGT----RPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199
Query: 320 KCGCVERAYGVFKEMPK--KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
KCG ++ A VF + K + +++W ++I+ +A G +A +++ + +G +P+ T
Sbjct: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC---------MIDILSRAGLFSE 428
+ LLS+C + G +L+ H + C +I + SR G S
Sbjct: 260 ISLLSSCQQPEALIYG----------FLIHGHGFQLGCDSDISLINTLISMYSRCGDISS 309
Query: 429 AERLIRSMPM----------------------------------EPDVFVWGALLGGCQM 454
A L M + +PD+ +L+ GC
Sbjct: 310 ATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGK 369
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYV--NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
G + LG + Y L L V L DMYAK G +D ++ + R +
Sbjct: 370 TGALGLGHWIDNY-ASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTA 428
Query: 513 GCSSVEVDGVVHE 525
++ ++G E
Sbjct: 429 MIAACALNGEFRE 441
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 184/428 (42%), Gaps = 50/428 (11%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L A + ++ + IHT ++KSP + + + C G + A N+F
Sbjct: 58 LSKACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKC-----GKVDDAYNLFDK 112
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
+ ++ ++N MI + S + L+ M G PD T L +
Sbjct: 113 MPVRNIASWNAMIIGFSQIGSLD------RVFNLFMGMRLVGTRPDAATVIGLTRAVISA 166
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD--EMSNRDVVSWNA 208
+V+ ++ G+ D V N+ I+ + CG + A+M+F + + R VSWN+
Sbjct: 167 KSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNS 226
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
+I Y G A+ ++ + + GF
Sbjct: 227 LIACYAHFGKYVDAVKSYKGL----------LCDGF------------------------ 252
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
KPD TI S+LS+C A+ +G +HG+ + G D D+ + L+ MY +CG + A
Sbjct: 253 -KPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAT 311
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F M + ++WTAMIS ++ G +A F ME G +P+ VT + L+S C +G
Sbjct: 312 ILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTG 371
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+ G W ++ ++ V +ID+ ++ G ++A + S+P V W A+
Sbjct: 372 ALGLGHW-IDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLP-NRTVVSWTAM 429
Query: 449 LGGCQMHG 456
+ C ++G
Sbjct: 430 IAACALNG 437
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 280/557 (50%), Gaps = 76/557 (13%)
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACK------------SSETNDTHSGKC 121
AL+VS SL+ A +F + D TYN+MI ++A + E +
Sbjct: 109 ALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGM 168
Query: 122 LKLY---------KQMLCTGISPDCLTFPFLL------------KECTKRLDG------- 153
L Y + + + D +++ L+ +E R+ G
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWN 228
Query: 154 --LVGASVYGQVVKF------GVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
+ G + G +V+ DVF +V+S + G + AR +FD M R+ VS
Sbjct: 229 IMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVS 288
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM----- 260
WNAM+ Y++ +D A +LF M RN+ SWN+++TG+ Q G EA +F M
Sbjct: 289 WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDA 348
Query: 261 -----------QSSSVEEMVK-----------PDKITIASVLSACAYLGAIDHGKWVHGY 298
Q EE ++ ++ A VLS CA + A++ G +HG
Sbjct: 349 VSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGR 408
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
L R+G +G AL+ MY KCG +E A F+EM ++D ++W MI+ +A +G+GKEA
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
+ F M +P+ +T VG+L+AC+HSGLVEKG F M H + V HY CMID
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+L RAG +EA L++ MP EPD +WGALLG ++H N ELG A+ + +L+P N
Sbjct: 529 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGM 588
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
YV L ++YA +G++ D +K R +M+ERG++K VPG S +EV VH FS KE+
Sbjct: 589 YVLLSNIYASSGKWRDARKMRVMMEERGVKK-VPGFSWIEVQNKVHTFSAGDCVHPEKEK 647
Query: 539 LVLILNGLSKIMKNGGF 555
+ L L MK G+
Sbjct: 648 IYAFLEDLDMRMKKAGY 664
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 162/365 (44%), Gaps = 59/365 (16%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M E KE+ + PC ++++T + +G L A VF + + D ++
Sbjct: 302 MDEAKELFNMM---PCRNVASWNTMLT------GYAQAGMLEEAKAVFDTMPQKDAVSWA 352
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
M+ ++ + S + L+L+ +M G + F +L C G ++
Sbjct: 353 AML------AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLH 406
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G++++ G FV N++++++ CG + AR F+EM RDVVSWN MI GY R
Sbjct: 407 GRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH---- 462
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
G +EALE+F M+++S KPD IT+ VL
Sbjct: 463 ---------------------------GFGKEALEIFDMMRTTS----TKPDDITLVGVL 491
Query: 281 SACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKD 338
+AC++ G ++ G + + G+ T ++D+ G+ G + A+ + K+MP + D
Sbjct: 492 AACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 551
Query: 339 TLAWTAMISVFALN---GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+ W A++ ++ G+ A + E+E E N +V L + A SG R
Sbjct: 552 STMWGALLGASRIHRNPELGRSAAEKIFELEPE----NAGMYVLLSNIYASSGKWRDARK 607
Query: 396 CFVMM 400
VMM
Sbjct: 608 MRVMM 612
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 144/372 (38%), Gaps = 93/372 (25%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNR----------------------------- 201
D + N+++ + AR LFDEM R
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158
Query: 202 --DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
D VSWN M+ Y+R+G ++ A LF + + SWN++++G+VQ G+ EA ELF
Sbjct: 159 EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDR 218
Query: 260 MQSSSV-------------EEMVKP----------DKITIASVLSACAYLGAIDHGK--- 293
M V +MV+ D T +V+S A G ++ +
Sbjct: 219 MPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVF 278
Query: 294 ----------W---VHGYLRRSGLD----------C-DVVIGTALVDMYGKCGCVERAYG 329
W V Y++R +D C +V ++ Y + G +E A
Sbjct: 279 DAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKA 338
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF MP+KD ++W AM++ ++ G +E F EM G N F +LS CA
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYAC-----MIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+E G M H L+ Y C ++ + + G +A M E DV
Sbjct: 399 LECG-----MQLHGRLIRAG-YGVGCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVVS 451
Query: 445 WGALLGGCQMHG 456
W ++ G HG
Sbjct: 452 WNTMIAGYARHG 463
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 148/342 (43%), Gaps = 39/342 (11%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+V N I+ M G V A LF M R ++NAM+ GY +G L +A LFR +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+ + +S+N+++ +A LF EM D +T ++S+ A G +
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVR--------DSVTYNVMISSHANHGLVS 148
Query: 291 HGKWVHGYLRRSGLDC----DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMI 346
L R D D V ++ Y + G VE A G+F + D ++W A++
Sbjct: 149 --------LARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALM 200
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
S + G EA + F M V V++ ++S A G + V R ++
Sbjct: 201 SGYVQWGKMSEARELFDRMPGRDV----VSWNIMVSGYARRGDM-------VEARRLFDA 249
Query: 407 EP--HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
P V+ + ++ ++ G+ EA R+ +MP E + W A++ ++
Sbjct: 250 APVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMD----E 304
Query: 465 AQYLIDLDP-LNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
A+ L ++ P N A + + YA+AG ++ K + M ++
Sbjct: 305 AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK 346
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 13/204 (6%)
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
L+ +V+ + + + G V A +F MP++ T + AM++ ++ NG A FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
+ RP++ ++ LL A A S + R F M V V Y MI +
Sbjct: 94 AIP----RPDNYSYNTLLHALAVSSSLADARGLFDEM----PVRDSVT-YNVMISSHANH 144
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
GL S A P E D W +L +G VE + + D ++ + L
Sbjct: 145 GLVSLARHYFDLAP-EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAIS---WNALM 200
Query: 484 DMYAKAGRFDDVKKTRNLMKERGI 507
Y + G+ + ++ + M R +
Sbjct: 201 SGYVQWGKMSEARELFDRMPGRDV 224
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 198/598 (33%), Positives = 300/598 (50%), Gaps = 94/598 (15%)
Query: 25 ESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYA 84
+S K +L + I +C ++R K+IH ++ S L TND ++T+ F ++ + Y
Sbjct: 6 QSLKWVLLDLIHKCNDLRSFKQIHAHLLTSA-LVTND--LVVTKAANFLGKHIT-DVHYP 61
Query: 85 TNVFSHIKRS-DLYTYNIMIRANACKSSETNDTHSGK----CLKLYKQMLCTGISPDCLT 139
N S + N++I A SG+ + +Y+ + G PD T
Sbjct: 62 CNFLKQFDWSLSSFPCNLLISGYA----------SGQLPWLAILIYRWTVRNGFVPDVYT 111
Query: 140 FPFLLKECTKRLDGLVGASVYGQV-VKFGVCDDVFVQ----------------------- 175
FP +LK C K G+ + V VK G+ D++VQ
Sbjct: 112 FPAVLKSCAK-FSGIGEVRQFHSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDM 170
Query: 176 ---------------------NSVISLFM----------------ACGFVTSARM----- 193
N ISLF+ ACG + +
Sbjct: 171 LVRDVVSWTGLISGYVKTGLFNEAISLFLRMNVEPNVGTFVSILGACGKLGRLNLGKGIH 230
Query: 194 --LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
+F + ++V NA++ Y++ + A +F M +++I SW S+I G VQ R
Sbjct: 231 GLVFKCLYGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPR 290
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
E+L+LF +MQ+S E PD + + SVLSACA LG +D G+WVH Y+ + DV IG
Sbjct: 291 ESLDLFSQMQASGFE----PDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIG 346
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
T LVDMY KCGC++ A +F MP K+ W A I A+NGYGKEA F ++ G R
Sbjct: 347 TTLVDMYAKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTR 406
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
PN VTF+ + +AC H+GLV++GR F M +Y + P + HY CM+D+L RAGL EA
Sbjct: 407 PNEVTFLAVFTACCHNGLVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAV 466
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
LI++MPM PDV + GALL +GNV +++ + L +++ + YV L ++YA
Sbjct: 467 ELIKTMPMPPDVQILGALLSSRNTYGNVGFTQEMLKSLPNVEFQDSGIYVLLSNLYATNK 526
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
++ +V+ R LMK++GI K PG S + VDG+ HEF + + EE+ ++LN L+
Sbjct: 527 KWAEVRSVRRLMKQKGISK-APGSSIIRVDGMSHEFLVGDNSHPQSEEIYVLLNILAN 583
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 276/546 (50%), Gaps = 53/546 (9%)
Query: 10 YSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
+ LL +P+ ++ P + L++A +R +++H + +K P TN H ++T L
Sbjct: 109 HCLLPNPSHLTFP------IALKSASRLPHPLRAGEQLHARSLKLPS-HTNPH--VLTSL 159
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
L A G L A VF + ++ +I A H + +
Sbjct: 160 LTLYARC--GLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVH------VARNAF 211
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
G+ PD T +L C + D G +V+ + G+ VFV + + L++ CG +
Sbjct: 212 ANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMA 271
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
AR ++F +M+ ++ +W +++ G+ G
Sbjct: 272 KAR-------------------------------EVFDKMRDKDAVAWGAMVGGYASNGH 300
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
REAL+LF MQ+ E V+PD +A LSAC LGA+D G+ + + V
Sbjct: 301 PREALDLFLAMQA----EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 356
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+GTAL+DMY KCG A+ VF++M KKD + W AMI + G+ K AF +ME G
Sbjct: 357 LGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSG 416
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
V+ N TF+GLL +C H+GL++ GR F M +Y + P + HY C++D+LSRAGL EA
Sbjct: 417 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEA 476
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
+LI MPM + + GALLGGC++H N EL E V LI L+P N YV L ++Y+
Sbjct: 477 HQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNR 536
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
GR++D K R MKE+G+ K VP CS VE +G VHEF + + +++ L+ L
Sbjct: 537 GRWEDAAKLRLDMKEKGVEK-VPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLE 595
Query: 550 MKNGGF 555
MK G+
Sbjct: 596 MKTMGY 601
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 262/431 (60%), Gaps = 10/431 (2%)
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVK--FGVCDDVFVQNSVISLFMAC 185
ML G+ PD + L C+K + G ++ V K + D + V ++I ++ C
Sbjct: 226 MLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVV--TLIDMYAKC 283
Query: 186 GFVTSARMLFDEMSN-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
G + A+ +FD + + WN +I GY + G +D+A LF +M R++ ++NS+ITG+
Sbjct: 284 GDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGY 343
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
+ GR R+AL+LF +++ + + D T+ S+L+ACA LGA+ G+ +H + + +
Sbjct: 344 IHSGRLRDALQLFMQLRRHGM----RADNFTVVSLLTACASLGALPQGRALHASIEQRIV 399
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
+ DV + TALVDMY KCG V+ A VF M ++D W+AMI+ A NG G +A ++F +
Sbjct: 400 EEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQ 459
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
M+ +G +P VT++ +L+AC+HS L+ +GR F MR ++ + P + HY CMID+L+R+G
Sbjct: 460 MKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSG 519
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCD 484
L EA L+++MPM+P+ +W ++L C++H N++L A++L+ L P A YV L +
Sbjct: 520 LLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYN 579
Query: 485 MYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILN 544
+Y + ++ + K+ R LM+E+G++K G SS+ V G VH+F + E++ ++
Sbjct: 580 IYIDSRQWVEAKRIRMLMEEQGVKKTA-GYSSITVAGQVHKFVVNDQSHPWTLEIITMME 638
Query: 545 GLSKIMKNGGF 555
+++ +K+ G+
Sbjct: 639 EIARRLKSAGY 649
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 198/451 (43%), Gaps = 45/451 (9%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
+++R+ ++H + S + + L C LS L Y ++F + +
Sbjct: 10 RSVRQASQLHAILTTSGRIAHRPSAEHLLNSLTNC-LSAPRHLRYVLSLFDRLPHPTTFL 68
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS 158
++ +RA C + H + + ++M G+ TF F+ + C +
Sbjct: 69 HDTALRA--CLQASAGADHP---VLILRRMRRGGVRMSAFTFHFVFRCCAAGAGAGLCRM 123
Query: 159 VYGQVVKFGVCDDV-FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++ ++ + V N +I ++ + G AR FDE+ +D V W +I G +R G
Sbjct: 124 LHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWG 183
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
LD A L + +RN+ SW S+I G+ + GR +A+ F M S VE PD++ +
Sbjct: 184 LLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVE----PDEVAVI 239
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV------- 330
LSAC+ L ++ G+ +H + + + + L+DMY KCG + +A V
Sbjct: 240 GALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRG 299
Query: 331 -------------------------FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
F +M +D + + +MI+ + +G ++A F ++
Sbjct: 300 QKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQL 359
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
G+R ++ T V LL+ACA G + +GR + +VE VY ++D+ + G
Sbjct: 360 RRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQ-RIVEEDVYLVTALVDMYMKCGR 418
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
EA + M E DV W A++ G +G
Sbjct: 419 VDEATAVFHRMG-ERDVHTWSAMIAGLAFNG 448
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 236/381 (61%), Gaps = 6/381 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DV + N+++ F+ G +TSAR LFDEM+++ V++W MI GY S D+D A LF M
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMP 234
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+RN+ SWN++I G+ Q + +EA+ LFQEMQ+++ + PD +TI SVL A + GA+
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTS---LDPDDVTILSVLPAISDTGALS 291
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G+W H +++R LD V + TA++DMY KCG +E+A +F EMP+K +W AMI +A
Sbjct: 292 LGEWCHCFVQRKNLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYA 351
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
LNG A D F M E +P+ +T + ++SAC H GLVE+GR F MMR + + +
Sbjct: 352 LNGNAHAALDLFLTMAKEE-KPDEITMLAVISACNHGGLVEEGRKWFQMMRK-FGLNAKI 409
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+D+L RAG +AE LI +MP +P+ + + L C + ++E E++ + ++
Sbjct: 410 EHYGCMVDLLGRAGNLKQAEHLITNMPFKPNGIILSSFLSACGQYKDIERAERILKKAVE 469
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
L+P N YV L ++YA R+DD +N+M++ +KEV GCS +E++ +V EF
Sbjct: 470 LEPQNDGNYVLLRNLYAADKRWDDFGMVKNMMRKNEAKKEV-GCSLIEINYIVSEFISGD 528
Query: 531 SPKVVKEELVLILNGLSKIMK 551
+ ++ + L+L L MK
Sbjct: 529 TTHPHRQSIHLVLEKLLVHMK 549
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 151/370 (40%), Gaps = 73/370 (19%)
Query: 203 VVSWNAMIIGYLRSGDLDVALDLF-RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
V+S +A+ IGY R LF +R + + F NS+I +++ ++ +++++
Sbjct: 18 VISASAVGIGYARK--------LFDQRPHREDSFLCNSMIKAYLETRHYNDSFAFYRDLR 69
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
E + PD T ++ +C + G +H + RSG D+ + T +VDMY K
Sbjct: 70 K---ETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKF 126
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + A VF EMP++ ++WTA+I + G A F +M + V + ++
Sbjct: 127 GKMGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQ---VKDVVIYNAMM 183
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
SG + R F M H ++ + MI + A +L +MP E +
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHKTVIT-----WTTMIHGYCNSNDIDSARKLFDAMP-ERN 237
Query: 442 VFVWGALLGG-CQMHGNVELGEKV-----AQYLIDLDPLN-------------------- 475
+ W ++GG CQ N + E + Q LDP +
Sbjct: 238 LVSWNTMIGGYCQ---NKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 476 --HAFY--------VNLC----DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
H F V +C DMY+K G + K+ I E+P +
Sbjct: 295 WCHCFVQRKNLDKKVKVCTAILDMYSKCGEIEKAKR---------IFDEMPEKQVASWNA 345
Query: 522 VVHEFSMKGS 531
++H +++ G+
Sbjct: 346 MIHGYALNGN 355
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 271/479 (56%), Gaps = 42/479 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A VF ++ DL T+N +I + C+ + LK+++ M +G+SPD L
Sbjct: 218 GMLEEAQCVFHGMECRDLVTWNSII--SGCEQR----GQTAAALKMFQGMRGSGVSPDVL 271
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T L + DG S++ V++ G D
Sbjct: 272 TLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVD--------------------------- 304
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D+++ NA++ Y + +++ A +F M ++ SWN++ITG++Q G A EA+E +
Sbjct: 305 ---DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYG 361
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
MQ E +K + T SVL A ++LGA+ G +H + GL+ DV +GT L+D+Y
Sbjct: 362 HMQK---HEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLY 418
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + A +F++MP++ T W A+IS ++G+G EA F M+ EG++P+HVTFV
Sbjct: 419 AKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFV 478
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
LL+AC+H+GLV++GR F +M+ Y + P HYACM D+L RAG EA I++MP+
Sbjct: 479 SLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPI 538
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+PD VWGALLG C++HGNVE+G+ +Q L +LDP N +YV + +MYAK G++D V +
Sbjct: 539 KPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEV 598
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF--SMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R+L++ + ++K PG SS+EV V+ F + P EE+ L L +++ G+
Sbjct: 599 RSLVRRQNLQK-TPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGY 656
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 203/431 (47%), Gaps = 52/431 (12%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G +S A VF + D+ +N M+ + C+++ + + + L+ +M+ G++ D +
Sbjct: 117 GRISEAYKVFDEMSERDVPAWNAML-SGLCRNAR-----AAEAVGLFGRMVGEGVAGDTV 170
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C D ++ ++ VK G+ ++FV N++I ++ G + A+ +F M
Sbjct: 171 TVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGM 230
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
RD+V+WN++I G + G AL +F+ M+ +
Sbjct: 231 ECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGV------------------------ 266
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC-DVVIGTALVDM 317
PD +T+ S+ SA A G K +H Y+ R G D D++ G A+VDM
Sbjct: 267 -----------SPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDM 315
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA-EGVRPNHVT 376
Y K +E A +F MP +D+++W +I+ + NG EA + + M+ EG++ T
Sbjct: 316 YAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGT 375
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FV +L A +H G +++G + + L VY C+ID+ ++ G +EA L M
Sbjct: 376 FVSVLPAYSHLGALQQGMRMHALSIKIGL-NVDVYVGTCLIDLYAKCGKLAEAMLLFEKM 434
Query: 437 PMEPDVFVWGALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
P W A++ G +HG+ + L ++ Q I D H +V+L + AG
Sbjct: 435 PRR-STGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPD---HVTFVSLLAACSHAGLV 490
Query: 493 DDVKKTRNLMK 503
D + ++M+
Sbjct: 491 DQGRSFFDVMQ 501
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 132/256 (51%), Gaps = 9/256 (3%)
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
V + +++ YLR G + A +F M +R++ +WN++++G + RA EA+ LF M
Sbjct: 103 VFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRM-- 160
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
V E V D +T++SVL C LG +H Y + GLD ++ + AL+D+YGK G
Sbjct: 161 --VGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLG 218
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
+E A VF M +D + W ++IS G A F+ M GV P+ +T V L S
Sbjct: 219 MLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLAS 278
Query: 383 ACAH--SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
A A G K C+V MR + V+ + A ++D+ ++ A+R+ SMP++
Sbjct: 279 AIAQGGDGRSAKSLHCYV-MRRGWDVDDIIAGNA-IVDMYAKLSNIEAAQRMFDSMPVQ- 335
Query: 441 DVFVWGALLGGCQMHG 456
D W L+ G +G
Sbjct: 336 DSVSWNTLITGYMQNG 351
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 280/557 (50%), Gaps = 76/557 (13%)
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACK------------SSETNDTHSGKC 121
AL+VS SL+ A +F + D TYN+MI ++A + E +
Sbjct: 109 ALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGM 168
Query: 122 LKLY---------KQMLCTGISPDCLTFPFLL------------KECTKRLDG------- 153
L Y + + + D +++ L+ +E R+ G
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWN 228
Query: 154 --LVGASVYGQVVKF------GVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
+ G + G +V+ DVF +V+S + G + AR +FD M R+ VS
Sbjct: 229 IMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVS 288
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM----- 260
WNAM+ Y++ +D A +LF M RN+ SWN+++TG+ Q G EA +F M
Sbjct: 289 WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDA 348
Query: 261 -----------QSSSVEEMVK-----------PDKITIASVLSACAYLGAIDHGKWVHGY 298
Q EE ++ ++ A VLS CA + A++ G +HG
Sbjct: 349 VSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGR 408
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
L R+G +G AL+ MY KCG +E A F+EM ++D ++W MI+ +A +G+GKEA
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
+ F M +P+ +T VG+L+AC+HSGLVEKG F M H + V HY CMID
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+L RAG +EA L++ MP EPD +WGALLG ++H N ELG A+ + +L+P N
Sbjct: 529 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGM 588
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
YV L ++YA +G++ D +K R +M+ERG++K VPG S +EV VH FS KE+
Sbjct: 589 YVLLSNIYASSGKWRDARKMRVMMEERGVKK-VPGFSWIEVQNKVHTFSAGDCVHPEKEK 647
Query: 539 LVLILNGLSKIMKNGGF 555
+ L L MK G+
Sbjct: 648 IYAFLEDLDMRMKKAGY 664
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 162/365 (44%), Gaps = 59/365 (16%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M E KE+ + PC ++++T + +G L A VF + + D ++
Sbjct: 302 MDEAKELFNMM---PCRNVASWNTMLT------GYAQAGMLEEAKAVFDTMPQKDAVSWA 352
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
M+ ++ + S + L+L+ +M G + F +L C G ++
Sbjct: 353 AML------AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLH 406
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G++++ G FV N++++++ CG + AR F+EM RDVVSWN MI GY R
Sbjct: 407 GRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH---- 462
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
G +EALE+F M+++S KPD IT+ VL
Sbjct: 463 ---------------------------GFGKEALEIFDMMRTTS----TKPDDITLVGVL 491
Query: 281 SACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKD 338
+AC++ G ++ G + + G+ T ++D+ G+ G + A+ + K+MP + D
Sbjct: 492 AACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 551
Query: 339 TLAWTAMISVFALN---GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+ W A++ ++ G+ A + E+E E N +V L + A SG R
Sbjct: 552 STMWGALLGASRIHRNPELGRSAAEKIFELEPE----NAGMYVLLSNIYASSGKWRDARK 607
Query: 396 CFVMM 400
VMM
Sbjct: 608 MRVMM 612
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 145/372 (38%), Gaps = 93/372 (25%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNR----------------------------- 201
D + N+++ + AR LFDEM R
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158
Query: 202 --DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
D VSWN M+ Y+R+G ++ A LF + ++ SWN++++G+VQ G+ EA ELF
Sbjct: 159 EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDR 218
Query: 260 MQSSSV-------------EEMVKP----------DKITIASVLSACAYLGAIDHGK--- 293
M V +MV+ D T +V+S A G ++ +
Sbjct: 219 MPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVF 278
Query: 294 ----------W---VHGYLRRSGLD----------C-DVVIGTALVDMYGKCGCVERAYG 329
W V Y++R +D C +V ++ Y + G +E A
Sbjct: 279 DAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKA 338
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF MP+KD ++W AM++ ++ G +E F EM G N F +LS CA
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYAC-----MIDILSRAGLFSEAERLIRSMPMEPDVFV 444
+E G M H L+ Y C ++ + + G +A M E DV
Sbjct: 399 LECG-----MQLHGRLIRAG-YGVGCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVVS 451
Query: 445 WGALLGGCQMHG 456
W ++ G HG
Sbjct: 452 WNTMIAGYARHG 463
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 142/330 (43%), Gaps = 37/330 (11%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+V N I+ M G V A LF M R ++NAM+ GY +G L +A LFR +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM---QSSSVEEMV------------------ 269
+ + +S+N+++ +A LF EM S + M+
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 270 --KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
+ D ++ +L+A G ++ + L S + DV+ AL+ Y + G + A
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEAR----GLFNSRTEWDVISWNALMSGYVQWGKMSEA 212
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
+F MP +D ++W M+S +A G EA F +A VR + T+ ++S A +
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF---DAAPVR-DVFTWTAVVSGYAQN 268
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
G++E+ R F M E + + M+ + + EA+ L MP +V W
Sbjct: 269 GMLEEARRVFDAM-----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNT 322
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
+L G G +E + V + D ++ A
Sbjct: 323 MLTGYAQAGMLEEAKAVFDTMPQKDAVSWA 352
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 13/204 (6%)
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
L+ +V+ + + + G V A +F MP++ T + AM++ ++ NG A FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
+ RP++ ++ LL A A S + R F M V V Y MI +
Sbjct: 94 AIP----RPDNYSYNTLLHALAVSSSLADARGLFDEM----PVRDSVT-YNVMISSHANH 144
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC 483
GL S A P E D W +L +G VE + + D ++ + L
Sbjct: 145 GLVSLARHYFDLAP-EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVIS---WNALM 200
Query: 484 DMYAKAGRFDDVKKTRNLMKERGI 507
Y + G+ + ++ + M R +
Sbjct: 201 SGYVQWGKMSEARELFDRMPGRDV 224
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 266/469 (56%), Gaps = 40/469 (8%)
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
VF + DL ++N +I+A E N+ + + L+++M + I PDCLT L
Sbjct: 222 VFDRMYVRDLISWNSIIKA-----YELNE-QPLRAISLFQEMRLSRIQPDCLTLISL--- 272
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
AS+ Q+ C V GF + D+
Sbjct: 273 ----------ASILSQLGDIRACRSV------------QGFTLRKGWFLE-----DITIG 305
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
NA+++ Y + G +D A +F + ++ SWN+II+G+ Q G A EA+E++ M+ E
Sbjct: 306 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE---E 362
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
+ ++ T SVL AC+ GA+ G +HG L ++GL DV + T+L DMYGKCG +E
Sbjct: 363 GEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLED 422
Query: 327 AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH 386
A +F ++P+ +++ W +I+ +G+G++A F+EM EGV+P+H+TFV LLSAC+H
Sbjct: 423 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 482
Query: 387 SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
SGLV++G+WCF MM+ Y + P + HY CM+D+ RAG A + I+SM ++PD +WG
Sbjct: 483 SGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWG 542
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
ALL C++HGNV+LG+ +++L +++P + ++V L +MYA AG+++ V + R++ +G
Sbjct: 543 ALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKG 602
Query: 507 IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+RK PG SS+EVD V F + EE+ L L +K G+
Sbjct: 603 LRK-TPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGY 650
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 200/488 (40%), Gaps = 127/488 (26%)
Query: 66 ITRLLFFCALS----------VSGSLSYATN-----VFSHIKRSDLYTYNIMIRA--NAC 108
+ RL+ F S VS +S + N F HI+ D+Y +N+MI A
Sbjct: 5 VKRLMMFTHFSDIALICNQPNVSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAG 64
Query: 109 KSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGV 168
SSE +C L+ ML +G++PD TFP +LK C +DG ++ +KFG
Sbjct: 65 NSSEVI-----RCFSLF--MLSSGLTPDYRTFPSVLKACRTVIDG---NKIHCLALKFGF 114
Query: 169 CDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRR 228
DV+V S+I L+ V +AR+LFDEM RD
Sbjct: 115 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD-------------------------- 148
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
+ SWN++I+G+ Q G A+EAL L S+ + M D +T+ S+LSAC G
Sbjct: 149 -----MGSWNAMISGYCQSGNAKEALTL-----SNGLRAM---DSVTVVSLLSACTEAGD 195
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
+ G +H Y + GL+ ++ + VF M +D ++W ++I
Sbjct: 196 FNRGVTIHSYSIKHGLESEL---------------LRDCQKVFDRMYVRDLISWNSIIKA 240
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS---------AC--------------- 384
+ LN A F+EM ++P+ +T + L S AC
Sbjct: 241 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 300
Query: 385 ------------AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
A GLV+ R F +L V + +I ++ G SEA +
Sbjct: 301 DITIGNAVVVMYAKLGLVDSARAVF-----NWLPNTDVISWNTIISGYAQNGFASEAIEM 355
Query: 433 IRSMPMEPDVF----VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV-NLCDMYA 487
M E ++ W ++L C G + G K+ L+ F V +L DMY
Sbjct: 356 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYG 415
Query: 488 KAGRFDDV 495
K GR +D
Sbjct: 416 KCGRLEDA 423
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 192/618 (31%), Positives = 305/618 (49%), Gaps = 78/618 (12%)
Query: 1 MSKKL---QMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCL 57
M+ KL Q + N PA + + + + +D+ K ++ +H
Sbjct: 1 MNSKLKLRQAIDTLYTNGPASHECYTRLALECFRASDVDQAKRLKSHMHLHL-------F 53
Query: 58 QTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIM--------------- 102
+ ND + RLL A SG +S+A +F + + D +++N M
Sbjct: 54 KPNDTF-IHNRLLNLYA--KSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRV 110
Query: 103 ----------IRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
+ N S + G L ++ +M G+ P T +L CT+ LD
Sbjct: 111 IFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLD 170
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
G ++G+++ + +VFV N++ L+ CG + AR LFD M R+VV+WN MI G
Sbjct: 171 LRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISG 230
Query: 213 YLRSGDLDVALDLFRRMK--------------------------KRNIFS---------W 237
YL++ + +DLF M+ R +F W
Sbjct: 231 YLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCW 290
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
+I G Q G+ +AL LF EM + E +PD TI+SV+S+CA L ++ HG+ VHG
Sbjct: 291 TIMIVGCAQNGKEEDALLLFSEM----LLENARPDGYTISSVVSSCAKLASLYHGQVVHG 346
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
G++ D+++ +ALVDMY KCG A+ +F M ++ ++W +MI +ALNG E
Sbjct: 347 KAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLE 406
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
A + M E ++P+ VTFVG+LSAC H+GLVE+G+ F M + +EP HYACM+
Sbjct: 407 ALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMV 466
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
++ R+G +A LI SM EP+ +W +L C M G+++ GE A+ LI+L+P N
Sbjct: 467 NLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAV 526
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKE 537
Y+ L +MYA GR+ DV R+LMK + ++K S +E+D VH+F +
Sbjct: 527 PYIMLSNMYAARGRWKDVASIRSLMKSKHVKK-FSAYSWIEIDNEVHKFVADDRTHPDAK 585
Query: 538 ELVLILNGLSKIMKNGGF 555
+ + LN L + ++ GF
Sbjct: 586 IIHVQLNRLIRKLQEAGF 603
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 276/546 (50%), Gaps = 53/546 (9%)
Query: 10 YSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
+ LL +P+ ++ P + L++A +R +++H + +K P TN H ++T L
Sbjct: 62 HCLLPNPSHLTFP------IALKSASRLPHPLRAGEQLHARSLKLPS-HTNPH--VLTSL 112
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
L A G L A VF + ++ +I A H + +
Sbjct: 113 LTLYARC--GLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVH------VARNAF 164
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
G+ PD T +L C + D G +V+ + G+ VFV + + L++ CG +
Sbjct: 165 ANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMA 224
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
AR ++F +M+ ++ +W +++ G+ G
Sbjct: 225 KAR-------------------------------EVFDKMRDKDAVAWGAMVGGYASNGH 253
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
REAL+LF MQ+ E V+PD +A LSAC LGA+D G+ + + V
Sbjct: 254 PREALDLFLAMQA----EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 309
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+GTAL+DMY KCG A+ VF++M KKD + W AMI + G+ K AF +ME G
Sbjct: 310 LGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSG 369
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
V+ N TF+GLL +C H+GL++ GR F M +Y + P + HY C++D+LSRAGL EA
Sbjct: 370 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEA 429
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
+LI MPM + + GALLGGC++H N EL E V LI L+P N YV L ++Y+
Sbjct: 430 HQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNR 489
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
GR++D K R MKE+G+ K VP CS VE +G VHEF + + +++ L+ L
Sbjct: 490 GRWEDAAKLRLDMKEKGVEK-VPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLE 548
Query: 550 MKNGGF 555
MK G+
Sbjct: 549 MKTMGY 554
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 264/477 (55%), Gaps = 14/477 (2%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F ++ ++ +++ MI A K L L++ ML +G+ PD +
Sbjct: 308 GCVESAREIFDRMEEKNVISWSAMIAAYGYHG------QGRKALDLFRMMLSSGMLPDKI 361
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T LL C + V+ Q G+ ++ V N ++ + + A LFD M
Sbjct: 362 TLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGM 421
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
RD VSW+ M+ G+ + GD FR + + N + G A E+L LF
Sbjct: 422 CVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPF---CGNANESLVLFD 478
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+M+ EE V PDK+ + +V+ ACA LGA+ + + Y++R DV++GTA++DM+
Sbjct: 479 KMR----EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMH 534
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCGCVE A +F M +K+ ++W+AMI+ + +G G++A D F M G+ PN +T V
Sbjct: 535 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLV 594
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
LL AC+H+GLVE+G F +M Y V V HY C++D+L RAG EA +LI SM +
Sbjct: 595 SLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTV 654
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
E D +WGA LG C+ H +V L EK A L++L P N Y+ L ++YA AGR++DV KT
Sbjct: 655 EKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKT 714
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R+LM +R ++K +PG + +EVD H+FS+ + +E+ +L L ++ G+
Sbjct: 715 RDLMSQRRLKK-IPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGY 770
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 173/352 (49%), Gaps = 67/352 (19%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK 92
+A+ C+N+ +++++H Q L+ + +L++F S +L A +F +
Sbjct: 86 SALVNCRNLTQVRQVHAQASVHGMLENI---VVANKLIYF--YSYYRALDDAYGLFDGMC 140
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
D ++++M+ A N C +++++ G PD T PF+++ C
Sbjct: 141 VRDSVSWSVMVGGFAKVGDYIN------CFGTFRELIRCGARPDNYTLPFVIRACR---- 190
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
D +Q +++ +++ C + AR LFD+M RD+V+W MI G
Sbjct: 191 -----------------DLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGG 233
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y G +A E+L LF++M+ EE V PD
Sbjct: 234 YAECG-------------------------------KANESLVLFEKMR----EEGVVPD 258
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
K+ + +V+ ACA LGA+ + + Y++R DV++GTA++DMY KCGCVE A +F
Sbjct: 259 KVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 318
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
M +K+ ++W+AMI+ + +G G++A D FR M + G+ P+ +T LL AC
Sbjct: 319 RMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 178/424 (41%), Gaps = 88/424 (20%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A +F ++ DL T+ +MI A + + N++ L L+++M G+ PD + +
Sbjct: 212 ARFLFDKMQERDLVTWTVMIGGYA-ECGKANES-----LVLFEKMREEGVVPDKVAMVTV 265
Query: 144 LKECTKRLDGLVGASV---YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
+ C K L + A + Y Q KF + DV + ++I ++ CG V SAR +FD M
Sbjct: 266 VFACAK-LGAMHKARIIDDYIQRKKFQL--DVILGTAMIDMYAKCGCVESAREIFDRMEE 322
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
++V+SW+AMI Y G ALDLFR M +
Sbjct: 323 KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML------------------------- 357
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
PDKIT+AS+L AC + + VH G+ ++++ LV Y
Sbjct: 358 ----------PDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSY 407
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE---------------- 364
++ AYG+F M +D+++W+ M+ FA G F TFRE
Sbjct: 408 YRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFC 467
Query: 365 ------------MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC--FVMMRHVYLVEPHV 410
M EGV P+ V V ++ ACA G + K R ++ + L V
Sbjct: 468 GNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL---DV 524
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
MID+ ++ G A + M E +V W A++ HG G K +D
Sbjct: 525 ILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ---GRKA----LD 576
Query: 471 LDPL 474
L P+
Sbjct: 577 LFPM 580
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 121/285 (42%), Gaps = 35/285 (12%)
Query: 179 ISLFMACGFVTSARMLFDEMSN----RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
IS + C +T R + + S ++V N +I Y LD A LF M R+
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
SW+ ++ GF + G F+E+ + +PD T+ V+ AC L +
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFREL----IRCGARPDNYTLPFVIRACRDLKNLQ---- 196
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
ALVDMY KC +E A +F +M ++D + WT MI +A G
Sbjct: 197 -----------------MALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGK 239
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC--FVMMRHVYLVEPHVYH 412
E+ F +M EGV P+ V V ++ ACA G + K R ++ + L V
Sbjct: 240 ANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQL---DVIL 296
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
MID+ ++ G A + M E +V W A++ HG
Sbjct: 297 GTAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ 340
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 167/402 (41%), Gaps = 79/402 (19%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQT-----------NDHHSLITRLL 70
P+K + +L I+ C+N+ +++++H Q LQ + + +L
Sbjct: 358 PDKITLASLLYACIN-CRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYG 416
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLY----TYNIMIRANACKSSETNDT-----HSGKC 121
F + V S+S++ V K D T+ +IR C + N T ++ +
Sbjct: 417 LFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIR---CGARPDNYTLPFCGNANES 473
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV---YGQVVKFGVCDDVFVQNSV 178
L L+ +M G+ PD + ++ C K L + A Y Q KF + DV + ++
Sbjct: 474 LVLFDKMREEGVVPDKVAMVTVVFACAK-LGAMHKARTIDDYIQRKKFQL--DVILGTAM 530
Query: 179 ISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWN 238
I + CG V SAR +FD M ++V+SW+AMI Y G ALDLF M + I
Sbjct: 531 IDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGIL--- 587
Query: 239 SIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVHG 297
P+KIT+ S+L AC++ G ++ G ++
Sbjct: 588 --------------------------------PNKITLVSLLYACSHAGLVEEGLRFFSL 615
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG--- 353
+ DV T +VD+ G+ G ++ A + + M +KD W A + +
Sbjct: 616 MWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVV 675
Query: 354 YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
++A + E++ + P H + + A A GRW
Sbjct: 676 LAEKAATSLLELQPQN--PGHYILLSNIYANA-------GRW 708
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 32/271 (11%)
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+E +SS + + + S L C L + + VH G+ ++V+ L+
Sbjct: 66 REEESSKFHFLQRLNPKFYISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYF 122
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y ++ AYG+F M +D+++W+ M+ FA G F TFRE+ G RP++ T
Sbjct: 123 YSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTL 182
Query: 378 VGLLSAC--------------AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
++ AC +E R+ F M+ LV + MI +
Sbjct: 183 PFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVT-----WTVMIGGYAEC 237
Query: 424 GLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYL----IDLDPLNH 476
G +E+ L M E PD ++ C G + + Y+ LD +
Sbjct: 238 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVI-- 295
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+ DMYAK G + ++ + M+E+ +
Sbjct: 296 -LGTAMIDMYAKCGCVESAREIFDRMEEKNV 325
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 261/474 (55%), Gaps = 44/474 (9%)
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLL 144
N+F I + YN +IRA S L +Y++ML G P+ T F L
Sbjct: 130 NLFDQIPDPTAFCYNSLIRALPAAGS-------APALAVYRRMLRAGSPRPNSFTLAFAL 182
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
K C G ++ Q ++ G+ +VQ +++L+ C V AR +FD M+
Sbjct: 183 KACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMA----- 237
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
GD +N+ +W+++++G+ + G EAL LF+EMQ+
Sbjct: 238 ------------GD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVG 272
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
VE PD++T+ SV+SACA GA+D GKWVH Y+ R G+ D+ + TAL+DMY KCG +
Sbjct: 273 VE----PDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLI 328
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
ERA GVF M +KDT AW+AMI FA++G ++A F M VRPN+VTF+G+LSAC
Sbjct: 329 ERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSAC 388
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
AHSGLVE GR + +M+++ ++P + +Y CM+D+L R+GL +A + MP+ P+ +
Sbjct: 389 AHSGLVEDGRRYWSIMQNLG-IKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVI 447
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
W LL C+ +++ E + L++L+P N YV L ++YA ++D V R MK
Sbjct: 448 WRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKG 507
Query: 505 RGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQY 558
+ + + G SS+E++G +HEF + E+ L+L ++ ++ G +
Sbjct: 508 KNV-TAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPW 560
>gi|218202317|gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
Length = 563
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 246/435 (56%), Gaps = 27/435 (6%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L+L+ +L +G PD + + L C + D A ++ K G V N +I
Sbjct: 63 LRLFDHLLRSGADPDHVAYALALGRCARGRDHRAAAQLHSHAAKRGAASHRRVCNGLIHA 122
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG + AR +FD D V+WN+++ GY +GD++ + F M+ R+ SWN+II
Sbjct: 123 YAVCGSLLDARKVFDRGHEGDAVAWNSLLRGYAAAGDVNALREFFVGMQARDTVSWNTII 182
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
V+ G EA+ +F+EM +S +E + PD++T+ GK
Sbjct: 183 AWCVENGEYEEAIAVFREMLAS-MECL--PDRVTLFP-------------GK-------- 218
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFD 360
G++ + + +AL++MY KC C+E A VF+ + + + W AM++ F NG ++A +
Sbjct: 219 -GIEVEERLSSALINMYSKCACIEGAVHVFENLGAQMNVDTWNAMLAGFTANGCSEKALE 277
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F ME G+ PN +TF +L+AC+H G VE+G CF M VY +EP + HY CM+D+
Sbjct: 278 LFARMEITGLVPNKITFNTVLNACSHGGFVEEGMGCFERMTKVYGIEPDIAHYGCMVDLF 337
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
RAGLF +AE++I+ MPM+PD VW AL+G C+ H N ELG K LI+ P +HA YV
Sbjct: 338 CRAGLFDKAEKMIQMMPMKPDAAVWKALVGACKTHRNFELGRKAGHMLIEAAPNDHAGYV 397
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELV 540
L ++YA G + V K R LM +RG++K VPG SS+E+DGV+HEF KE++
Sbjct: 398 LLSNIYALDGNWTGVHKVRKLMLDRGVQK-VPGSSSIEIDGVIHEFISGDKSHSSKEDIY 456
Query: 541 LILNGLSKIMKNGGF 555
+L+ + + +K G+
Sbjct: 457 EMLSEMCQQLKVAGY 471
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 84 ATNVFSHI-KRSDLYTYNIMI---RANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
A +VF ++ + ++ T+N M+ AN C S K L+L+ +M TG+ P+ +T
Sbjct: 243 AVHVFENLGAQMNVDTWNAMLAGFTANGC---------SEKALELFARMEITGLVPNKIT 293
Query: 140 FPFLLKECTKRLDGLV--GASVYGQVVK-FGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
F +L C+ G V G + ++ K +G+ D+ ++ LF G A +
Sbjct: 294 FNTVLNACSH--GGFVEEGMGCFERMTKVYGIEPDIAHYGCMVDLFCRAGLFDKAEKMIQ 351
Query: 197 EMSNR-DVVSWNAMI 210
M + D W A++
Sbjct: 352 MMPMKPDAAVWKALV 366
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 305/539 (56%), Gaps = 56/539 (10%)
Query: 17 AKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS 76
AK +P K+ +LR + + K +LK+IH ++++ + N SL+T+LL L
Sbjct: 3 AKQTPLTKQMLSELLRASSSKPK---QLKKIHAIVLRTGFSEKN---SLLTQLLE--NLV 54
Query: 77 VSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPD 136
V G + YA VF + + ++ +N + + + + L LYK+M G+ PD
Sbjct: 55 VIGDMCYARQVFDEMHKPRIFLWNTLFKGY------VRNQLPFESLLLYKKMRDLGVRPD 108
Query: 137 CLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
T+PF++K ++ D G +++ VVK+G F G V +
Sbjct: 109 EFTYPFVVKAISQLGDFSCGFALHAHVVKYG--------------FGCLGIVATE----- 149
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
+++ Y++ G+L A LF M+ +++ +WN+ + VQ G + ALE
Sbjct: 150 ------------LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEY 197
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F +M + +V+ D T+ S+LSAC LG+++ G+ ++ R+ +DC++++ A +D
Sbjct: 198 FNKMCADAVQ----FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
M+ KCG E A +F+EM +++ ++W+ MI +A+NG +EA F M+ EG+RPN+VT
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 377 FVGLLSACAHSGLVEKGRWCFVMM--RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
F+G+LSAC+H+GLV +G+ F +M + +EP HYACM+D+L R+GL EA I+
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
MP+EPD +WGALLG C +H ++ LG+KVA L++ P +++V L ++YA AG++D
Sbjct: 374 KMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDC 433
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM--KGSP--KVVKEELVLILNGLSKI 549
V K R+ M++ G +K V SSVE +G +H F+ K P K + E+L IL + K+
Sbjct: 434 VDKVRSKMRKLGTKK-VAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKM 491
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 251/425 (59%), Gaps = 40/425 (9%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC----GFVTS 190
P+ T+PF+LK C + +G SV+G V+KFG D+V VQN+++ ++ C G +
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
AR +FDEM D VS W+++I G+V+ GR+
Sbjct: 68 ARKVFDEMYKSDSVS-------------------------------WSAMIGGYVRVGRS 96
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
+A+ LF+EMQ V PD+IT+ SVLSAC LGA++ GKWV Y+ + + +V +
Sbjct: 97 SDAINLFREMQIKGV----CPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVEL 152
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
AL+DM+ KCG V++A +F+ M +++ ++WT++I A++G G EA F EM GV
Sbjct: 153 SNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGV 212
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
P+ V F+GLLSAC+HSGLV+KG+ F MR + + P + HY CM+D+L RAGL EA
Sbjct: 213 TPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEAL 272
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
+ ++ MP++P+ VW L+ C+ HG ++LGEK+ + LI +P++ + YV L ++YAK
Sbjct: 273 KFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMS 332
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
++ + R M +G++K +PG + +E+D ++EF +E+ +++ + K M
Sbjct: 333 DWEKKTRIREAMDMKGMKK-IPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEM 391
Query: 551 KNGGF 555
K G+
Sbjct: 392 KRAGY 396
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 173/424 (40%), Gaps = 90/424 (21%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIK-SPCLQTNDHHSLITRLLFFCALSVSGS 80
PNK + +L+ A N+ K +H ++K + N ++L+ ++ C G
Sbjct: 8 PNKFTYPFVLK-ACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVH--MYCCCRGGEGG 64
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
+ +A VF + +SD +++ MI + ++D + L+++M G+ PD +T
Sbjct: 65 IEFARKVFDEMYKSDSVSWSAMI-GGYVRVGRSSDA-----INLFREMQIKGVCPDEITM 118
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
+L CT +G V V K V +V + N++I +F CG V A LF M
Sbjct: 119 VSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRE 178
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
R++VSW S+I G GR EA+ +F+EM
Sbjct: 179 RNIVSW-------------------------------TSVIGGLAMHGRGVEAVAVFEEM 207
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA----LVD 316
S V PD + +LSAC++ G +D GK +R+ D +V +VD
Sbjct: 208 VRSG----VTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRK---DFSIVPKIEHYGCMVD 260
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
M + G V+ A +EMP + PN V
Sbjct: 261 MLCRAGLVKEALKFVQEMP----------------------------------IDPNPVV 286
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP-HVYHYACMIDILSRAGLFSEAERLIRS 435
+ L++AC G ++ G + R + EP H +Y + +I ++ + + R+ +
Sbjct: 287 WRTLINACRAHGELKLGE---KITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREA 343
Query: 436 MPME 439
M M+
Sbjct: 344 MDMK 347
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 167/477 (35%), Positives = 268/477 (56%), Gaps = 40/477 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L VF + DL ++N +I+A E N+ + + L+++M + I PDCL
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKA-----YELNE-QPLRAISLFQEMRLSRIQPDCL 349
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T L AS+ Q+ C V GF +
Sbjct: 350 TLISL-------------ASILSQLGDIRACRSV------------QGFTLRKGWFLE-- 382
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D+ NA+++ Y + G +D A +F + ++ SWN+II+G+ Q G A EA+E++
Sbjct: 383 ---DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M+ E + ++ T SVL AC+ GA+ G +HG L ++GL DV + T+L DMY
Sbjct: 440 IMEE---EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 496
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
GKCG +E A +F ++P+ +++ W +I+ +G+G++A F+EM EGV+P+H+TFV
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
LLSAC+HSGLV++G+WCF MM+ Y + P + HY CM+D+ RAG A + I+SM +
Sbjct: 557 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+PD +WGALL C++HGNV+LG+ +++L +++P + ++V L +MYA AG+++ V +
Sbjct: 617 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 676
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R++ +G+RK PG SS+EVD V F + EE+ L L +K G+
Sbjct: 677 RSIAHGKGLRK-TPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGY 732
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 219/498 (43%), Gaps = 98/498 (19%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C N++ K +H +++ S +Q + + L +C L G+++ A + F HI+ D+Y
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNL--YCYL---GNVALARHTFDHIQNRDVY 118
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
+N+MI N + +C L+ ML +G++PD TFP +LK C +DG
Sbjct: 119 AWNLMISGYG---RAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVIDG---N 170
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++ +KFG DV+V S+I L+ V +AR+LFDEM RD
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD--------------- 215
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
+ SWN++I+G+ Q G A+EAL L S+ + M D +T+
Sbjct: 216 ----------------MGSWNAMISGYCQSGNAKEALTL-----SNGLRAM---DSVTVV 251
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
S+LSAC G + G +H Y + GL+ ++ + L+D+Y + G + VF M +
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS---------AC---- 384
D ++W ++I + LN A F+EM ++P+ +T + L S AC
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371
Query: 385 -----------------------AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
A GLV+ R F +L V + +I +
Sbjct: 372 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF-----NWLPNTDVISWNTIISGYA 426
Query: 422 RAGLFSEAERLIRSMPMEPDVF----VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
+ G SEA + M E ++ W ++L C G + G K+ L+
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 478 FYV-NLCDMYAKAGRFDD 494
F V +L DMY K GR +D
Sbjct: 487 FVVTSLADMYGKCGRLED 504
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 9/228 (3%)
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
Y + K +H L S +V I LV++Y G V A F + +D AW
Sbjct: 63 YCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNL 122
Query: 345 MISVFALNGYGKEAFDTFRE-MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV 403
MIS + G E F M + G+ P++ TF +L AC +++ + + ++
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC--RTVIDGNKIHCLALKFG 180
Query: 404 YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEK 463
++ + VY A +I + SR A L MP+ D+ W A++ G GN +
Sbjct: 181 FMWD--VYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGNAKEALT 237
Query: 464 VAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
++ L +D + V+L +AG F+ + + G+ E+
Sbjct: 238 LSNGLRAMDSVT---VVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 283/524 (54%), Gaps = 64/524 (12%)
Query: 43 ELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS-----------LSYATNVFSHI 91
+L+ IH I+ L N + + L F +S+S LSYA NVF+ I
Sbjct: 34 KLRXIHAFSIRHGVLLNNPD---MGKHLIFTIVSLSAPMSYAYNVFTWVLSYAYNVFTMI 90
Query: 92 KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRL 151
+++T+N M R A + L+ Y+QM+ + I PD T+PFLLK +K L
Sbjct: 91 HNPNVFTWNTMTRGYA------ESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSL 144
Query: 152 DGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMII 211
+ G +++ ++ G VFVQNS++ ++ ACG
Sbjct: 145 NVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACG------------------------- 179
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
D + A ++F M+ R++ + S+I GF GR EAL LF+EM + VE P
Sbjct: 180 ------DTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFREMSAEGVE----P 229
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
D T+ S+LSA A LGA++ G+ VH YL + GL + + +L+D+Y KC +
Sbjct: 230 DGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLLDLYAKCDAIWEX---- 285
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
+++ ++WT++I A+NG+G+EA + FREME +G+ P+ +TFVG+L AC+H G+++
Sbjct: 286 ----ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYACSHCGMLD 341
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
+G F M+ + + P + HY CM+D+LSRAGL +A I++MP++P+ W LLG
Sbjct: 342 EGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLGA 401
Query: 452 CQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
C +HG++ LGE +L+ L+P + YV L ++Y R+ DV+ R M + G++K
Sbjct: 402 CTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVKK-T 460
Query: 512 PGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
G S VE+ V+EF+M +++ +L +++++K G+
Sbjct: 461 SGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKITELLKLEGY 504
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 258/449 (57%), Gaps = 23/449 (5%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A VF + L +N+M+R + L +QM +G++PD +
Sbjct: 98 GRVDIARKVFDEMPSRALVLWNMMVRCY------IRCGWYSAAVALSEQMERSGVTPDRV 151
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF-----VQNSVISLFMACGFVTSARM 193
T + C++ D +G ++ + D+VF V N+++ ++ + A
Sbjct: 152 TLVTAVTACSRARDLSLGRRIHVYM------DNVFGFNLPVANALLDMYTKNDCLEEAVK 205
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LF++M R+++SW ++ GY +G LD A LF + K++++ W ++I VQ G EA
Sbjct: 206 LFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEA 265
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
L LF++MQ VE PD+ T+ ++L+ CA LGA+D G+W+H Y + + D V+GTA
Sbjct: 266 LTLFRDMQMQRVE----PDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTA 321
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
L+DMY KCG +E++ VF M +D AWTA+I A NG A + F++M+ V+P+
Sbjct: 322 LIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPD 381
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
VTF+G+LSAC H GLV++GR F MR VY +EP V HY+C++++L RAGL EAERLI
Sbjct: 382 GVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLI 441
Query: 434 RSMPMEPDVF-VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
+P+ D ++GALL C+ HGNVE+ E++ + + + D + + ++YA A R+
Sbjct: 442 GDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRW 501
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
+DV + R M ++K GCS +EV G
Sbjct: 502 EDVIRVRGKMAHPTVKKNA-GCSLIEVKG 529
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 192/444 (43%), Gaps = 82/444 (18%)
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV 155
L+ N++IR A + S + + +Y + G+ D T+PF+L+ +
Sbjct: 14 LWECNVLIRTLARRGS------FARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVE 67
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G + VK G D + +S++ ++ G V AR +FDEM +R +V WN M+ Y+R
Sbjct: 68 GRKAHAAAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIR 127
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
G W S A+ L ++M+ S V PD++T
Sbjct: 128 CG-------------------WYS------------AAVALSEQMERSG----VTPDRVT 152
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ + ++AC+ + G+ +H Y+ + ++ + AL+DMY K C+E A +F++MP
Sbjct: 153 LVTAVTACSRARDLSLGRRIHVYM-DNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMP 211
Query: 336 -------------------------------KKDTLAWTAMISVFALNGYGKEAFDTFRE 364
+KD + WTAMI+ +G +EA FR+
Sbjct: 212 ARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRD 271
Query: 365 MEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAG 424
M+ + V P+ T V LL+ CA+ G +++G W + V A +ID+ S+ G
Sbjct: 272 MQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTA-LIDMYSKCG 330
Query: 425 LFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYV 480
++ + M D W A++ G +G +EL + + + + D + +
Sbjct: 331 HIEKSLEVFWRMQGR-DATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVL 389
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKE 504
+ C G D+ +K + M+E
Sbjct: 390 SAC---CHGGLVDEGRKQFHAMRE 410
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 7/263 (2%)
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
+A+ RR ++ N +I + G + ++ ++++ + D T VL
Sbjct: 1 MAMAAARRGHGMPLWECNVLIRTLARRGSFARVMAVYYDLRARGL----VADSFTYPFVL 56
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
A L G+ H ++G D G++L++MY G V+ A VF EMP + +
Sbjct: 57 RAVGVLKLSVEGRKAHAAAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALV 116
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
W M+ + G+ A +ME GV P+ VT V ++AC+ + + GR V M
Sbjct: 117 LWNMMVRCYIRCGWYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYM 176
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+V+ V + ++D+ ++ EA +L MP ++ W L+ G + G ++
Sbjct: 177 DNVFGFNLPVAN--ALLDMYTKNDCLEEAVKLFEQMPAR-NIISWTILVSGYGLAGQLDK 233
Query: 461 GEKVAQYLIDLDPLNHAFYVNLC 483
+ + D + +N C
Sbjct: 234 ARVLFNQCKEKDLILWTAMINAC 256
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 238/386 (61%), Gaps = 17/386 (4%)
Query: 153 GLVGASVYG-----QVVKFGVCDDVFVQNSVISLFMACGFVTSARM-------LFDEMSN 200
LV A V G +V G D V + ++ + +ACG + +AR S+
Sbjct: 184 ALVSAFVRGGRFAEALVLVGQMDVVPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESD 243
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
++ NA++ Y++ LD+A +F R+ R++ SW +I+G VQ +ALE+F EM
Sbjct: 244 LKLIVGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEM 303
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
Q S V KPDK+ +++VLSAC LGA++ G+WVH Y+ R G++ DV +GT+LVDMY K
Sbjct: 304 QKSRV----KPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDVHVGTSLVDMYAK 359
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CGC+E + +F++MP K+ +W A+I+ FAL+G+G+EA + F M A G+ PN V+F+ +
Sbjct: 360 CGCLETSLSIFRKMPLKNLSSWNALINGFALHGHGREALEHFDRMVASGLAPNEVSFIIV 419
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
L AC HSGLV++G F M++ Y + P HY ++D+L RAGL EA + ++MPM P
Sbjct: 420 LGACCHSGLVQEGLQLFESMKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAMPMRP 479
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
VF WGALL CQ H V+ +++ +++ +L+ Y L ++YA R+ DVK+ R
Sbjct: 480 AVFTWGALLSACQAHRQVDFSQQILRHVHELESSESGVYALLSNIYAVNHRWADVKRVRG 539
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEF 526
LM E+G++KE PG S +EV+G EF
Sbjct: 540 LMSEKGLQKE-PGSSVIEVNGKTSEF 564
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 170/366 (46%), Gaps = 58/366 (15%)
Query: 106 NACKSSETNDTHSGKCLKLYKQMLCTGIS----PDCLTFPFLLKECTKRLDGLV------ 155
NA S T + + +L G PD T P LK C + G
Sbjct: 72 NALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAGGDDGGLRE 131
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G V+ K G + V+N++++L+ CG AR +FDEM++RDVVSW A++
Sbjct: 132 GRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALV----- 186
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
+ FV+GGR EAL L +M V P++ T
Sbjct: 187 --------------------------SAFVRGGRFAEALVLVGQMD-------VVPNEGT 213
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+A VL AC LGA GK VHG+ R D +++G A++DMY KC ++ A VF +
Sbjct: 214 LACVLVACGRLGAARAGKAVHGWYLRRESDLKLIVGNAVLDMYVKCEKLDLARRVFDRLL 273
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+D ++WT MIS +A + F EM+ V+P+ V +LSAC G +E GRW
Sbjct: 274 VRDVISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALESGRW 333
Query: 396 CFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
H Y+ +E V+ ++D+ ++ G + + R MP++ ++ W AL+ G
Sbjct: 334 V-----HEYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLK-NLSSWNALING 387
Query: 452 CQMHGN 457
+HG+
Sbjct: 388 FALHGH 393
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 121/295 (41%), Gaps = 45/295 (15%)
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA------YLGAID 290
+N++I+ G A F + ++ E +PD T+ + L ACA G +
Sbjct: 71 FNALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAGGDDGGLR 130
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G+ VH + G + + ALV +YG CG A VF EM +D ++WTA++S F
Sbjct: 131 EGRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFV 190
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR----WCFV-------- 398
G EA +M+ V PN T +L AC G G+ W
Sbjct: 191 RGGRFAEALVLVGQMD---VVPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKLI 247
Query: 399 ----------------MMRHVY--LVEPHVYHYACMIDILSRAGLFSEAERLIRSMP--- 437
+ R V+ L+ V + MI L + L S+A + M
Sbjct: 248 VGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSR 307
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV--NLCDMYAKAG 490
++PD V +L C G +E G V +Y I+ + +V +L DMYAK G
Sbjct: 308 VKPDKVVLSTVLSACTSLGALESGRWVHEY-IERKGIEWDVHVGTSLVDMYAKCG 361
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 257/450 (57%), Gaps = 12/450 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G L A +F + + +++ MI + + ++ + LKL+ +M+ G P+
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMI------ARYSQSGYAEEALKLFSKMVQEGFKPNI 316
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
F L G +++G V K G+ DVF+ +S+I L+ CG R++FD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ ++VV WN+M+ GY +G L+ +LF + ++N SW +II G+++ + + LE+F
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVF 436
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+ S P+K T +SVL ACA + ++D G VHG + + G+ D+ +GTAL DM
Sbjct: 437 NTLLVSGQ----TPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDM 492
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME-AEGVRPNHVT 376
Y KCG + + VF+ MP+K+ ++WT MI A +G+ E+ F EME V PN +
Sbjct: 493 YAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
+ +L AC+H GLV+KG W F M VY ++P HY C++D+LSR+G EAE IR++
Sbjct: 553 LLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTI 612
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
P +P+ W ALL GC+ + + ++ E+ A+ L L N A YV L ++YA AGR+ DV
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVS 672
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R LM+E+G++K GCS VEV VH F
Sbjct: 673 NIRKLMREKGLKKS-GGCSWVEVRNQVHSF 701
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 190/372 (51%), Gaps = 45/372 (12%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ LKL+ ++L +G+ P+ +TF +++ C + D +G S+ G VVK G + V NS+I
Sbjct: 167 EALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLI 226
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
+L + G + AR +FD M RDVVSW A++ Y+ +GDL A +F M +RN SW++
Sbjct: 227 TLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSA 286
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I + Q G A EAL+LF +M V+E KP+ A LSA A L A+ G +HG++
Sbjct: 287 MIARYSQSGYAEEALKLFSKM----VQEGFKPNISCFACTLSALASLRALSAGINIHGHV 342
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG------ 353
+ G+D DV IG++L+D+Y KCG + VF + +K+ + W +M+ +++NG
Sbjct: 343 TKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETE 402
Query: 354 -------------YG------------KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+G ++ + F + G PN TF +L ACA
Sbjct: 403 ELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIA 462
Query: 389 LVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
++KG M H + ++ ++ + D+ ++ G ++++ MP E +
Sbjct: 463 SLDKG-----MNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP-EKNEIS 516
Query: 445 WGALLGGCQMHG 456
W ++ G G
Sbjct: 517 WTVMIQGLAESG 528
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 41/328 (12%)
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
Q+VK D+ V N +IS ++ G + AR+LFDEM R+ VSW+A+I G ++ G ++
Sbjct: 77 QIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEE 136
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
++ F R +N+ SW + I+GFV+ G EAL+LF + +E V+P+ +T SV+
Sbjct: 137 SMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRL----LESGVRPNDVTFTSVVR 192
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDC-------------------------------DVVI 310
AC LG G + G + ++G + DVV
Sbjct: 193 ACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVS 252
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
TA++D Y + G + A +F EMP+++ ++W+AMI+ ++ +GY +EA F +M EG
Sbjct: 253 WTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGF 312
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL--VEPHVYHYACMIDILSRAGLFSE 428
+PN F LSA A + G + HV ++ V+ + +ID+ + G +
Sbjct: 313 KPNISCFACTLSALASLRALSAG---INIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDD 369
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHG 456
RL+ + +E +V W +++GG ++G
Sbjct: 370 G-RLVFDLILEKNVVCWNSMVGGYSING 396
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 186/553 (33%), Positives = 283/553 (51%), Gaps = 59/553 (10%)
Query: 44 LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK--RSDLYTYNI 101
++E+H Q++K L N + RL+ A ++ L + VF I+ +D + N
Sbjct: 368 VRELHAQVLKQ-GLHLNPRAA--ARLV--SAYALLRLLPSSRRVFDAIRDPHADAFLANT 422
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
M+RA A + + L + M D T+ FL+K + V A V+
Sbjct: 423 MLRAYALGGAPRD------ALAAFSAM----PRRDSFTYSFLIKALSAAGVAPVRA-VHS 471
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
VVK G +D FV N++I + G + AR +FDEM RDVVSWN + +R G+L
Sbjct: 472 HVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAG 531
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV---------------- 265
A LF M +++ SWN+I+ G+ + G A ELFQ M +V
Sbjct: 532 ARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDL 591
Query: 266 -----------------------EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
E V+ D + S+L+ACA G++ GK +H Y+R+
Sbjct: 592 EMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKR 651
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFK-EMPKKDTLAWTAMISVFALNGYGKEAFDT 361
L + AL+DM+ KCGCV RA VF E +KD+++W ++I FA++G+G +A +
Sbjct: 652 NLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALEL 711
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F +M+ +G P+ VT + +LSAC H G V++GR F M Y + P + HY CMID+L
Sbjct: 712 FAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLG 771
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
R GL EA LI+SMP EP+ +WG+LL C++H NVE E L L P N Y
Sbjct: 772 RGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAV 831
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
L ++YA+AG++ D+ K R MK G +K G S VE++ HEF++ +++
Sbjct: 832 LSNIYAEAGQWSDMAKARMQMKGTGSQKTA-GSSWVELNETFHEFTVGDRKHQDSDQISE 890
Query: 542 ILNGLSKIMKNGG 554
+++ LS +K+ G
Sbjct: 891 MVDRLSSHVKHVG 903
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 228/357 (63%), Gaps = 9/357 (2%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D NS+I + G V SA+ LF+ + V+W +M+ G+ R+GD++ A +F M
Sbjct: 76 DTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPVTWTSMVAGFCRAGDVESARRVFEEMP 135
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+R++ SWN++I+G V EAL LF+ M +EE P++ T+ SVLSAC GA++
Sbjct: 136 ERDLVSWNAMISGCVGNRLPVEALCLFRWM----MEEGFVPNRGTVVSVLSACTGAGALE 191
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
GKWVH ++ + L D +GTALVDMY KCG VE A VF + ++T W AMI+ A
Sbjct: 192 TGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLA 251
Query: 351 LNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
+NGY +A D FR+ME G V P+ VTFVG+L AC+H+G V+ G+ F + Y VE
Sbjct: 252 MNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELI 311
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI 469
+ HYACM+D+L+R+G EA +LI MPM+PDV VW ALLGGC++H NV++ E V +
Sbjct: 312 LEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVKMAENV---IS 368
Query: 470 DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+++ +V L ++YA GR++ V+ R M+ +GI K +PGCSSVE+DG +HEF
Sbjct: 369 EMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEK-IPGCSSVEMDGSIHEF 424
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDC 137
G++ A VF+ ++ + T+N MI A + +S K L +++QM G ++PD
Sbjct: 223 GAVELALEVFTGLRARNTCTWNAMINGLAM------NGYSAKALDMFRQMELNGTVAPDE 276
Query: 138 LTFPFLLKECTKRLDGLVGAS---VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
+TF +L C+ G V A Y K+GV + ++ L G + A L
Sbjct: 277 VTFVGVLLACSHA--GFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKL 334
Query: 195 FDEMSNR-DVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
EM + DVV W A++ G ++ +A ++ M+
Sbjct: 335 ITEMPMKPDVVVWRALLGGCRLHKNVKMAENVISEME 371
>gi|345505222|gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
Length = 597
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 190/594 (31%), Positives = 297/594 (50%), Gaps = 118/594 (19%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS-YATNVFS--HI--- 91
CK ++ +IH ++I + ++ ++ L TR++ A S L+ +A VF H+
Sbjct: 6 CKTADDVNKIHARLITTGVIKNSN---LTTRIVLAFASSRRQYLAEFARCVFEEHHVYSL 62
Query: 92 ---KRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECT 148
+ D + +N +I+ S ++ T + L L+ ML G+S D + +LK C+
Sbjct: 63 PYGETEDPFLWNAVIK------SHSHGTDPRRSLFLFCLMLENGVSVDKFSLSLVLKACS 116
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL--------------------------- 181
+ G ++G + K G+ D+F+QN +I L
Sbjct: 117 RLGFVKAGMXIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVFDRMPQRDSVSYNS 176
Query: 182 ----FMACGFVTSARMLFD----------------------------------EMSNRDV 203
++ CG + SAR LFD EM +D+
Sbjct: 177 MIDGYVKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNIASKLFSEMPEKDL 236
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW-------------------------- 237
+SWN+MI GY++ G ++ A DLF M +R++ +W
Sbjct: 237 ISWNSMIDGYVKHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFIHQAKTLFDQIPHR 296
Query: 238 -----NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
NS++ G+VQ EALELF +M+ E + PD+ T+ VLSA A LG +
Sbjct: 297 DVVAYNSMMAGYVQNKYHMEALELFIKMEK---ESHLSPDETTLVIVLSAIAQLGRLSKA 353
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+H Y+ + +G AL+DMY KCG ++ A VFK + K+ W A+I A++
Sbjct: 354 MDMHFYIVKKQFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNIDHWNAIIGGLAIH 413
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
G G AFD ++E ++P+ +TF+G+L+AC+HSGLV++G CF +MR + +EP + H
Sbjct: 414 GLGGPAFDMLLQIERLSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQH 473
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
Y CM+DILSR+G A+ LI MP+EP+ +W L C H E+GE VA++LI
Sbjct: 474 YGCMVDILSRSGSIELAKILIEKMPIEPNDVIWRTFLTACSHHKEFEMGELVAKHLILQA 533
Query: 473 PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
N + YV L +MYA G + DV++ R +MKER I+K +PGCS +E+DG VHEF
Sbjct: 534 GYNPSSYVLLSNMYASCGMWKDVRRVRTMMKERKIQK-IPGCSWIELDGRVHEF 586
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 270/535 (50%), Gaps = 52/535 (9%)
Query: 25 ESTKLILRNAIDECKNMREL---KEIHTQIIKSPC-LQTNDHHSLITRLLFFCALSVSGS 80
E + + + CKN L K+IH +I +S L N ++LI + C GS
Sbjct: 529 EPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALIN-MYIRC-----GS 582
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
L A NVF ++ D+ ++ MI A + + K ++L+ QM G P TF
Sbjct: 583 LQDARNVFHSLQHRDVMSWTAMIGGCADQGEDM------KAIELFWQMQNEGFRPVKSTF 636
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
+LK CT C D VI+ + G+
Sbjct: 637 SSILKVCTS-----------------SACLDE--GKKVIAYILNSGY------------E 665
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
D NA+I Y +SG + A ++F +M R+I SWN II G+ Q G + A+E +M
Sbjct: 666 LDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQM 725
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
Q E+ V P+K + S+L+AC+ A++ GK VH + + L DV +G AL+ MY K
Sbjct: 726 Q----EQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAK 781
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG A VF + +K+ + W AMI+ +A +G +A F ME EG++P+ TF +
Sbjct: 782 CGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSI 841
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
LSAC H+GLV +G F M Y V P + HY C++ +L RA F EAE LI MP P
Sbjct: 842 LSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPP 901
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
D VW LLG C++HGN+ L E A + L+ N A Y+ L ++YA AGR+DDV K R
Sbjct: 902 DAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRR 961
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+M+ RGIRKE PG S +EVD ++HEF E+ L LS M+ G+
Sbjct: 962 VMEGRGIRKE-PGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGY 1015
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 230/490 (46%), Gaps = 55/490 (11%)
Query: 26 STKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL--LFFCALSVSGSLSY 83
+T L + NA K + K IH+ I + D HS ++ + G L
Sbjct: 331 TTYLSILNACSTSKALEAGKLIHSHI-------SEDGHSSDVQIGNALISMYARCGDLPK 383
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A +F + + DL ++N +I A + G+ ++LYKQM G+ P +TF L
Sbjct: 384 ARELFYTMPKRDLISWNAIIAGYARREDR------GEAMRLYKQMQSEGVKPGRVTFLHL 437
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
L C G ++ +++ G+ + + N++++++ CG + A+
Sbjct: 438 LSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ----------- 486
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
++F + R++ SWNS+I G Q G A +LFQEMQ+
Sbjct: 487 --------------------NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNE 526
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
+E PD IT ASVLS C A++ GK +HG + SGL DV +G AL++MY +CG
Sbjct: 527 ELE----PDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGS 582
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
++ A VF + +D ++WTAMI A G +A + F +M+ EG RP TF +L
Sbjct: 583 LQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKV 642
Query: 384 CAHSGLVEKGRWCFV-MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
C S +++G+ ++ Y ++ V + +I S++G ++A + MP D+
Sbjct: 643 CTSSACLDEGKKVIAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMPSR-DI 699
Query: 443 FVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF-YVNLCDMYAKAGRFDDVKKTRNL 501
W ++ G +G + + A + + D + + F +V+L + + ++ K+
Sbjct: 700 VSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAE 759
Query: 502 MKERGIRKEV 511
+ +R ++ +V
Sbjct: 760 IVKRKLQGDV 769
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 208/437 (47%), Gaps = 52/437 (11%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
K+IH+QIIK+ + + + + C G L A VF+ I D+ +YN M+
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKC-----GDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 105 ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVV 164
A K+ + +CL L+ QM GISPD +T+ LL T G ++ V
Sbjct: 203 LYAQKA------YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTV 256
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
+ G+ D+ V +++++ + C GD+D A
Sbjct: 257 EEGLNSDIRVGTALVTMCVRC-------------------------------GDVDSAKQ 285
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
F+ R++ +N++I Q G EA E + M+S V ++ T S+L+AC+
Sbjct: 286 AFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV----ALNRTTYLSILNACS 341
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
A++ GK +H ++ G DV IG AL+ MY +CG + +A +F MPK+D ++W A
Sbjct: 342 TSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNA 401
Query: 345 MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHV 403
+I+ +A EA +++M++EGV+P VTF+ LLSACA+S G+ ++R
Sbjct: 402 IIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSG 461
Query: 404 YLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEK 463
H+ + ++++ R G EA+ + DV W +++ G HG+ E K
Sbjct: 462 IKSNGHLAN--ALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYK 518
Query: 464 VAQYLI--DLDPLNHAF 478
+ Q + +L+P N F
Sbjct: 519 LFQEMQNEELEPDNITF 535
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 201/438 (45%), Gaps = 59/438 (13%)
Query: 21 PPNKESTKLILRNAIDECKNMR---ELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV 77
P E+ + + C R E K IH Q++++ +L+ + C
Sbjct: 20 PRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCR--- 76
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
S+ A VF + R D+ ++N +I A + + K +L+++M G P+
Sbjct: 77 --SVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKK------KAFQLFEEMQNAGFIPNK 128
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T+ +L C + G ++ Q++K G D VQNS++S++ CG + AR +F
Sbjct: 129 ITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAG 188
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+S RDVVS+N M+ Y Q +E L LF
Sbjct: 189 ISPRDVVSYNTMLGLY-------------------------------AQKAYVKECLGLF 217
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+M S E + PDK+T ++L A +D GK +H GL+ D+ +GTALV M
Sbjct: 218 GQMSS----EGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTM 273
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
+CG V+ A FK +D + + A+I+ A +G+ EAF+ + M ++GV N T+
Sbjct: 274 CVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTY 333
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVE----PHVYHYACMIDILSRAGLFSEAERLI 433
+ +L+AC+ S +E G+ + H ++ E V +I + +R G +A L
Sbjct: 334 LSILNACSTSKALEAGK-----LIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELF 388
Query: 434 RSMPMEPDVFVWGALLGG 451
+MP + D+ W A++ G
Sbjct: 389 YTMP-KRDLISWNAIIAG 405
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 120/248 (48%), Gaps = 11/248 (4%)
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
+ ++ T ++L C + K +H + + + D+ + L++MY KC V A+
Sbjct: 23 TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH 82
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VFKEMP++D ++W ++IS +A G+ K+AF F EM+ G PN +T++ +L+AC
Sbjct: 83 QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 389 LVEKGRWCFV-MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
+E G+ +++ Y +P V + ++ + + G A ++ + DV +
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGISPR-DVVSYNT 199
Query: 448 LLGGCQMHGNVE----LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+LG V+ L +++ I D + Y+NL D + D+ K+ L
Sbjct: 200 MLGLYAQKAYVKECLGLFGQMSSEGISPDKVT---YINLLDAFTTPSMLDEGKRIHKLTV 256
Query: 504 ERGIRKEV 511
E G+ ++
Sbjct: 257 EEGLNSDI 264
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 184/608 (30%), Positives = 306/608 (50%), Gaps = 88/608 (14%)
Query: 28 KLILRNAIDE-CKNMRELKEIHTQIIKSPCLQTND------------HH-------SLIT 67
K +LR ++D C E +TQ++ C++TN+ HH L
Sbjct: 4 KSMLRQSVDLLCSRSTATSEAYTQLVLE-CVRTNEINQAKRLQSHMEHHLFQPTDSFLHN 62
Query: 68 RLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSS---------------- 111
+LL A G L A N+F + + D +++N ++ A A S
Sbjct: 63 QLLHLYA--KFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDS 120
Query: 112 -ETNDTHSG--------KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
N T +G + L+L+K+M G P T +L + LD G ++G
Sbjct: 121 VSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGS 180
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD---- 218
++ +VF+ N++ ++ CG + AR LFD ++ +++VSWN MI GY ++G
Sbjct: 181 IIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240
Query: 219 -------------------------------LDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+D A +F K+++I W +++ G+ +
Sbjct: 241 IGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKN 300
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
GR +AL LF EM + E ++PD T++SV+S+CA L ++ HG+ VHG +GL+ +
Sbjct: 301 GREEDALLLFNEM----LLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNN 356
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+++ +AL+DMY KCG ++ A VF MP ++ ++W AMI A NG+ K+A + F M
Sbjct: 357 LLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ 416
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
+ +P++VTF+G+LSAC H +E+G+ F + + + + P + HYACM+++L R G
Sbjct: 417 QKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIE 476
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
+A LI++M +PD +W LL C G++ E A++L +LDP Y+ L +MYA
Sbjct: 477 QAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYA 536
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
GR+ DV RNLMK + ++K G S +E+D VH F+ + E++ LN L
Sbjct: 537 SMGRWKDVASVRNLMKSKNVKK-FAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLI 595
Query: 548 KIMKNGGF 555
++ GF
Sbjct: 596 GKLQEEGF 603
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 172/517 (33%), Positives = 280/517 (54%), Gaps = 53/517 (10%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A +F + D+ ++N MI S ++ + + L +YKQM+ GI D T +
Sbjct: 204 AFELFDKLCDRDVISWNSMI------SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISV 257
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
L C +G +V+ +K + N+++ ++ CG + A +F++M R+V
Sbjct: 258 LVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKR------------------------------- 232
VSW +MI GY R G D A+ L ++M+K
Sbjct: 318 VSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 377
Query: 233 --------NIFSWNSIITGFVQGGRAREALELFQEMQSSSV---EEMV---KPDKITIAS 278
N+F N+++ + + G A +F M + M+ KPD T+A
Sbjct: 378 IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMAC 437
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
VL ACA L A++ GK +HGY+ R+G D + ALVD+Y KCG + A +F +P KD
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++WT MI+ + ++GYG EA TF EM G+ P+ V+F+ +L AC+HSGL+E+G F
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 557
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+M++ + +EP + HYACM+D+LSR G S+A I ++P+ PD +WGALL GC+ + ++
Sbjct: 558 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDI 617
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
EL EKVA+ + +L+P N +YV L ++YA+A ++++VK+ R + ++G+RK PGCS +E
Sbjct: 618 ELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKN-PGCSWIE 676
Query: 519 VDGVVHEF-SMKGSPKVVKEELVLILNGLSKIMKNGG 554
+ G V+ F S S + + +L + + MK G
Sbjct: 677 IKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEG 713
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 183/401 (45%), Gaps = 49/401 (12%)
Query: 129 LCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFV 188
+C + T+ +L+ C G V+ + V D + ++S + CG +
Sbjct: 91 MCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDL 150
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDL--------------------DVALDLFRR 228
R +FD M ++V WN M+ Y + GD + A +LF +
Sbjct: 151 KEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDK 210
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
+ R++ SWNS+I+G+V G L ++++M ++ D TI SVL CA G
Sbjct: 211 LCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID----VDLATIISVLVGCANSGT 266
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
+ GK VH +S + + L+DMY KCG ++ A VF++M +++ ++WT+MI+
Sbjct: 267 LSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAG 326
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL--- 405
+ +G A ++ME EGV+ + V +L ACA SG ++ G+ H Y+
Sbjct: 327 YTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV-----HDYIKAN 381
Query: 406 -VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG-------------- 450
+E +++ ++D+ ++ G A + +M ++ D+ W ++G
Sbjct: 382 NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK-DIISWNTMIGELKPDSRTMACVLP 440
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAG 490
C +E G+++ Y++ + N L D+Y K G
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIK----RSDLYTYNIMIRANA-CKSSET-NDTHSG 119
IT +L CA S GSL +V +IK S+L+ N ++ A C S E N S
Sbjct: 355 ITSILHACARS--GSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFST 412
Query: 120 KCLK--LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS 177
+K + + + PD T +L C G ++G +++ G D V N+
Sbjct: 413 MVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANA 472
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
++ L++ CG + AR+LFD + ++D+VSW MI GY
Sbjct: 473 LVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGY------------------------ 508
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
G EA+ F EM+ + +E PD+++ S+L AC++ G ++ G W
Sbjct: 509 -------GMHGYGNEAIATFNEMRDAGIE----PDEVSFISILYACSHSGLLEQG-WRFF 556
Query: 298 YLRRSGLDCDVVIG--TALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
Y+ ++ + + + +VD+ + G + +AY + +P D W A++
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 120/325 (36%), Gaps = 87/325 (26%)
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+ V +NA I+ + + GDL+ A++L KK E
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCKK--------------------------SE 96
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
+++ T +SVL CA L + GK VH ++ + + D +G LV Y
Sbjct: 97 LETK-----------TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYA 145
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR---EMEAEGVRPNH-- 374
CG ++ VF M KK+ W M+S +A G KE+ F+ E EG RP
Sbjct: 146 TCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAF 205
Query: 375 -----------VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
+++ ++S +GL E+G + M +
Sbjct: 206 ELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY--------------------- 244
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-L 482
+ ++ D+ ++L GC G + LG+ V I + N L
Sbjct: 245 ------------LGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTL 292
Query: 483 CDMYAKAGRFDDVKKTRNLMKERGI 507
DMY+K G D + M ER +
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGERNV 317
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 230/364 (63%), Gaps = 4/364 (1%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
NS+IS ++ G V +A+ +F +M + VVSW AMI GY +GDL A ++F M +N+
Sbjct: 207 NSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVV 266
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SWN++I+G+V +AL +F M + +PD+ T+ S+LSACA+LG+++HGKW+
Sbjct: 267 SWNAMISGYVHNHEFDQALCVFHHML---INGECRPDQTTLISILSACAHLGSLEHGKWI 323
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
+ Y++++ L + +G AL+DM+ KCG VE A VF M K+ + WT M+S A+NG
Sbjct: 324 NSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKC 383
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+EA + F +M EG +P+ V F+ +LSAC H GLVE+G+ F M + ++P + HY C
Sbjct: 384 REAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGC 443
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
M+D+L RAG EA R M ++P+ +W LL C++HGN +L + V + ++D +P N
Sbjct: 444 MVDLLGRAGKLEEAVRFTARMHLKPNAVIWATLLFCCKIHGNGDLLKSVTEKIMDQEPSN 503
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
++ + ++ A GR++DV R M+++ + K VPGCSS++V VHEF K + V
Sbjct: 504 PSYLTLVSNLSASFGRWEDVLSFRVAMRQQRMEK-VPGCSSIQVGNRVHEFLAKDTRHVQ 562
Query: 536 KEEL 539
++E+
Sbjct: 563 RKEI 566
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 232/501 (46%), Gaps = 94/501 (18%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ CKN+RELK+ H QI LQ +D ++ +L+ ++S A N+ +
Sbjct: 9 LQHCKNIRELKQTHLQIFIHG-LQHSDF--MLPKLI---------TVSSAFNLLDYA--- 53
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK--ECTKRLD 152
TH + L++Y +M + + TF FLLK E ++ L+
Sbjct: 54 ---------------------THK-EALRVYSRMKALMVEANSFTFTFLLKCFETSQALE 91
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG-FVTSARMLFDEMSNRDVVSWNAMII 211
G ++G+++K G VFVQNS++ + C + SA +F+EM RDV+SWN+MI
Sbjct: 92 D--GRVIHGEILKLGFGSSVFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMIS 149
Query: 212 GYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKP 271
Y+ G++ A+ L +M +RNI +WNS++ G + G E+ S E+M
Sbjct: 150 AYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKAGN--------MELAHSVFEQMPLR 201
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
++++ S++S +G + + + + VV TA++ Y G ++ A +F
Sbjct: 202 NEVSWNSMISGYVRIGDVRAAQSIFYQMPEK----TVVSWTAMISGYATNGDLKSAENIF 257
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLV 390
MP K+ ++W AMIS + N +A F M G RP+ T + +LSACAH G +
Sbjct: 258 NHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSL 317
Query: 391 EKGRW--CFVMMRHVYLVEP-------------------HVYH---------YACMIDIL 420
E G+W ++ ++L P V+H + M+ L
Sbjct: 318 EHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGL 377
Query: 421 SRAGLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYLID---LDP- 473
+ G EA L M +E PD ++ A+L C G VE G++V ++ + P
Sbjct: 378 AVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPR 437
Query: 474 LNHAFYVNLCDMYAKAGRFDD 494
+ H Y + D+ +AG+ ++
Sbjct: 438 IEH--YGCMVDLLGRAGKLEE 456
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 261/474 (55%), Gaps = 44/474 (9%)
Query: 86 NVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS-PDCLTFPFLL 144
N+F I + YN +IRA S L +Y++ML G P+ T F L
Sbjct: 81 NLFDQIPDPTAFCYNSLIRALPAAGS-------APALAVYRRMLRAGSPRPNSFTLAFAL 133
Query: 145 KECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVV 204
K C G ++ Q ++ G+ +VQ +++L+ C V AR +FD M+
Sbjct: 134 KACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMA----- 188
Query: 205 SWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSS 264
GD +N+ +W+++++G+ + G EAL LF+EMQ+
Sbjct: 189 ------------GD-------------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVG 223
Query: 265 VEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCV 324
VE PD++T+ SV+SACA GA+D GKWVH Y+ R G+ D+ + TAL+DMY KCG +
Sbjct: 224 VE----PDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLI 279
Query: 325 ERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSAC 384
ERA GVF M +KDT AW+AMI FA++G ++A F M VRPN+VTF+G+LSAC
Sbjct: 280 ERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSAC 339
Query: 385 AHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
AHSGLVE GR + +M+++ ++P + +Y CM+D+L R+GL +A + MP+ P+ +
Sbjct: 340 AHSGLVEDGRRYWSIMQNLG-IKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVI 398
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
W LL C+ +++ E + L++L+P N YV L ++YA ++D V R MK
Sbjct: 399 WRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKG 458
Query: 505 RGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQY 558
+ + + G SS+E++G +HEF + E+ L+L ++ ++ G +
Sbjct: 459 KNV-TAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPW 511
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 275/493 (55%), Gaps = 47/493 (9%)
Query: 66 ITRLLFFCALSVS-----GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
+ RL +F A +S G LS A +F I +++ + ++ A A + +
Sbjct: 58 LARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYE------E 111
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVIS 180
L + +M G+ P+ P +LK C D G +++ ++K D ++ +++I
Sbjct: 112 ALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIY 171
Query: 181 LFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK----KRNIFS 236
++ CG V A +FD + ++D+V NAM+ GY + G + AL+L ++M+ K N+ S
Sbjct: 172 MYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVS 231
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVE---------------------------EMV 269
WN++I GF Q G E+F+ M ++ VE EM+
Sbjct: 232 WNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEML 291
Query: 270 K----PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
P +TI+S+L AC + + HGK +HGY G++ DV + +ALVDMY KCG +
Sbjct: 292 DQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYIS 351
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
A +F MP+++T+ W ++I +A +GY EA + F +ME + +H+TF +L+AC+
Sbjct: 352 EAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACS 411
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
H+G+VE G F M+ Y +EP + HYACM+D+L RAG SEA LI++MP+EPD FVW
Sbjct: 412 HAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVW 471
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
GALLG C+ HGN+EL E A++L +L+P + + L ++YA AGR+ + K + +MK+R
Sbjct: 472 GALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQR 531
Query: 506 GIRKEVPGCSSVE 518
K PGCS +E
Sbjct: 532 KFGK-FPGCSWIE 543
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 42/355 (11%)
Query: 156 GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLR 215
G +++ +V G+ + ++S + CG +++AR LFD++ N ++ W + R
Sbjct: 46 GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 105
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
G + EAL F EMQ +E ++P++
Sbjct: 106 RGFYE-------------------------------EALSAFSEMQ----KEGLRPNQFV 130
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
+ S+L AC +L G+ +H + ++ + D I +AL+ MY KCG VE+A VF +
Sbjct: 131 LPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIV 190
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
KD + AM+S +A +G+ EA + ++M+ GV+PN V++ L++ + G
Sbjct: 191 DKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSE 250
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME---PDVFVWGALLGGC 452
F +M VEP V + +I + E + M + P +LL C
Sbjct: 251 VFRLMT-ANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPAC 309
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVN--LCDMYAKAGRFDDVKKTRNLMKER 505
N+ G+++ Y + + + YV L DMYAK G + K +M ER
Sbjct: 310 TNVANLRHGKEIHGYAMVIG-VEKDVYVRSALVDMYAKCGYISEAKILFYMMPER 363
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 8/287 (2%)
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
+++ ++ S + T A + A A+ G+ +H +L GL L+
Sbjct: 10 VYRVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLM 69
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
Y +CG + A +F ++P + W + A G+ +EA F EM+ EG+RPN
Sbjct: 70 SFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQF 129
Query: 376 TFVGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+L AC H G V++++ + E Y + +I + S+ G +A R+
Sbjct: 130 VLPSILKACGHLSDRRTGENMHTVILKNSF--ESDAYIISALIYMYSKCGHVEKACRVFD 187
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL--IDLDPLNHAFYVNLCDMYAKAGRF 492
+ ++ D+ V A++ G HG V + Q + + P N + L +++ G
Sbjct: 188 WI-VDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKP-NVVSWNTLIAGFSQVGDK 245
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEEL 539
V + LM G+ +V +SV + G V F KE L
Sbjct: 246 SMVSEVFRLMTANGVEPDVVSWTSV-ISGFVQNFHNHEGFDAFKEML 291
>gi|296084064|emb|CBI24452.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 276/517 (53%), Gaps = 42/517 (8%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ CK + +K IH QII ++ L +L+ A ++ A VF +
Sbjct: 14 LQRCKGTKTIKSIHAQIIIG---GFEENPFLGAKLVGKYAQCYESNIEDARKVFDCLPDR 70
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
D++ +N +I+ A N + L +Y+ M C+G++ + TFPF+LK C DG
Sbjct: 71 DVFVWNTIIQGYA------NLGPFMEALNIYEYMRCSGVAANRYTFPFVLKACGAMKDGK 124
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G +++G VVK G+ D+FV N++++ + C + ++R +FD +S
Sbjct: 125 KGQAIHGHVVKHGLDLDLFVGNALVAFYAKCNEIGASRRVFDMIS--------------- 169
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+++I +WNS+I+G+ G A +AL LF M + + PD
Sbjct: 170 ----------------EKDIVTWNSMISGYAINGCADDALVLFHNMLQVQGDTVYAPDSA 213
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ ++L ACA AI G W+H Y+ +SG++ D +G+ L+ MY CG + A VF +
Sbjct: 214 TLVAILPACAQAAAIQEGLWIHSYVIKSGIELDAALGSGLIAMYANCGLLNSARDVFDRI 273
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
K+ + W A+I + ++G+ EA F + G+ P+ V F+ LLSA +H+G+V +G
Sbjct: 274 DDKNIVVWNAIIRCYGMHGHADEALKMFSGLIDSGLHPDGVIFLCLLSAFSHAGMVAEGM 333
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F M Y VE HYA ++DIL RAG EA +++MP++P V+GALLG C++
Sbjct: 334 ELFEKMGD-YGVEKSSEHYASVVDILGRAGFLHEAVEFVKNMPVQPGKDVYGALLGACRI 392
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
H N+EL E++A+ L LDP N Y+ L MY AG++++ + R +KE+ IRK + GC
Sbjct: 393 HNNIELAEEIAEKLFVLDPDNAGRYIILVKMYEDAGKWENAARLRKALKEKNIRKPL-GC 451
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
S++E+ V+H F ++ K+++ L L IM+
Sbjct: 452 SAIELGCVLHTFGVEDKSHPFKDQIFDTLERLDNIME 488
>gi|357496515|ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493561|gb|AES74764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 637
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 301/538 (55%), Gaps = 32/538 (5%)
Query: 29 LILRNAIDECKN---MRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVSGSLSY 83
L R+ + +C +R +++H I + + + +H + + L C+L S+
Sbjct: 21 LHFRSLLRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLP-----SH 75
Query: 84 ATNVFSHIKRS--DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A +F I +S D Y +IR C E+ LKL+ QM + D +
Sbjct: 76 ARKLFDEIPQSHKDSVDYTALIRH--CPPFES--------LKLFIQMRQFDLPLDGVVMV 125
Query: 142 FLLKECTKRLDG---LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
L C RL G VG+ ++ VVKFG V N+++++++ G V AR +F+ +
Sbjct: 126 CALNACA-RLGGGDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGI 184
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
R VVSW+ + G ++ ++ LF M +RN +W +I G+V G +EA L +
Sbjct: 185 EVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLK 244
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY-LRRSGLDCDVVIGTALVDM 317
EM + +T+ SVLSAC+ G + G+WVH Y ++ GLD V++GT+LVDM
Sbjct: 245 EMVFGC---GFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDM 301
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG + A VF+ M K++ +AW AM+ A++G GK A D F M E V+P+ VTF
Sbjct: 302 YAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSM-VEEVKPDGVTF 360
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+ LLSAC+HSGLVEKG F + VY ++P + HYACM+ +L RAG EAE ++++M
Sbjct: 361 MALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYACMVGLLGRAGRLEEAEIMVKNMR 420
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+ P+ V G+L+G C HG ++LGEK+ + L+++DPLN +++ L +MYA +G+ +
Sbjct: 421 IPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNTEYHIVLSNMYALSGKVEKANS 480
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R ++K+RGI+K VPG SS+ VDG +H+F E+ + L+ + +++ G+
Sbjct: 481 LRQVLKKRGIKK-VPGMSSIYVDGKLHQFIAGDKSHTRTSEIYMKLDEMICRLRSAGY 537
>gi|145335647|ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein [Arabidopsis thaliana]
gi|332190892|gb|AEE29013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 474
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 157/377 (41%), Positives = 224/377 (59%), Gaps = 5/377 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D+ + N++IS ++ G + AR LFD+M RDV+SWN ++ GY GD++ +F M
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+RN+FSWN +I G+ Q GR E L F+ M E V P+ T+ VLSACA LGA D
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVD---EGSVVPNDATMTLVLSACAKLGAFD 205
Query: 291 HGKWVHGYLRRSGLD-CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
GKWVH Y G + DV + AL+DMYGKCG +E A VFK + ++D ++W MI+
Sbjct: 206 FGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGL 265
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A +G+G EA + F EM+ G+ P+ VTFVG+L AC H GLVE G F M + + P
Sbjct: 266 AAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPE 325
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI 469
+ H C++D+LSRAG ++A I MP++ D +W LLG +++ V++GE + LI
Sbjct: 326 IEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELI 385
Query: 470 DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMK 529
L+P N A +V L ++Y AGRFDD + + M++ G +KE G S +E D + +F
Sbjct: 386 KLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKE-AGVSWIETDDGLVKFYSS 444
Query: 530 GSPKVVKEELVLILNGL 546
G EEL IL L
Sbjct: 445 GEKHPRTEELQRILREL 461
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 119/285 (41%), Gaps = 47/285 (16%)
Query: 176 NSVISLFMAC--GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRN 233
N + M C G + SA +F EM ++VV W +MI GYL + DL A F +R+
Sbjct: 30 NQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERD 89
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
I WN++I+G+++ G EA LF +M
Sbjct: 90 IVLWNTMISGYIEMGNMLEARSLFDQMPCR------------------------------ 119
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG 353
DV+ +++ Y G +E VF +MP+++ +W +I +A NG
Sbjct: 120 -------------DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNG 166
Query: 354 YGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
E +F+ M EG V PN T +LSACA G + G+W + + V
Sbjct: 167 RVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNV 226
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+ID+ + G A + + + D+ W ++ G HG+
Sbjct: 227 KNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMINGLAAHGH 270
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 17/193 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G++ A VF IKR DL ++N MI A H + L L+ +M +GISPD +
Sbjct: 238 GAIEIAMEVFKGIKRRDLISWNTMINGLAAHG------HGTEALNLFHEMKNSGISPDKV 291
Query: 139 TFPFLLKECTKR---LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
TF +L C DGL A F + ++ V+ L GF+T A
Sbjct: 292 TFVGVLCACKHMGLVEDGL--AYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFI 349
Query: 196 DEMSNR-DVVSWNAMIIG----YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
++M + D V W A ++G Y + +VAL+ +++ RN ++ + + GR
Sbjct: 350 NKMPVKADAVIW-ATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRF 408
Query: 251 REALELFQEMQSS 263
+A L M+ +
Sbjct: 409 DDAARLKVAMRDT 421
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 280/503 (55%), Gaps = 52/503 (10%)
Query: 63 HSLITRLLFFCALSVSGSLSY----------ATNVFSHIKRSDLYTYNIMIRANACKSSE 112
H L+ +L F + V+ SL + A +F + D ++N MI S
Sbjct: 17 HCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMI------SGY 70
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDV 172
+ ++ + L + +M G+ D +T +L C + D L G ++ V+K G+ ++
Sbjct: 71 CQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFEL 130
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
FV N++I+++ G + A+ +F ++I +
Sbjct: 131 FVSNALINMYAKFGSLGHAQKVF------------GLLI--------------------K 158
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
++ SWN++ITG+ Q G A EA+E++ M+ E + P++ T S+L A +++GA+ G
Sbjct: 159 DVVSWNTLITGYAQNGLASEAIEVYLLMEE---HEEIIPNQGTWVSILPAYSHVGALQQG 215
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+HG + ++ L DV +GT L+DMYGKCG ++ A +F ++P+K+++ W AMIS + ++
Sbjct: 216 MRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVH 275
Query: 353 GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH 412
G G++A + FREM+AE V+P+H+TFV LLSAC+HSGLV +WCF MM Y ++P + H
Sbjct: 276 GDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKH 335
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
Y CM+D+ RAG A I+ MP++PD WGALL C++HGN+ELG+ ++ L ++D
Sbjct: 336 YGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVD 395
Query: 473 PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSP 532
N +YV L ++YA G+++ V R+L ++RG+RK PG SS+ ++ V F
Sbjct: 396 SENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKN-PGWSSIILNNKVDVFYTGNQT 454
Query: 533 KVVKEELVLILNGLSKIMKNGGF 555
EE+ L L+ +K G+
Sbjct: 455 HPKCEEIYRELRDLTSKIKTIGY 477
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
V+ AC G + GK +H + + G + DV + +LV MY + G V A +F +MP +D
Sbjct: 3 VVKAC---GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
+W AMIS + NG EA D EM EGV+ + +T +L CA G + G+
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGK---- 115
Query: 399 MMRHVYLV----EPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
+ H+Y++ E ++ +I++ ++ G A+++ + DV W L+ G
Sbjct: 116 -LIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI--KDVVSWNTLITGYAQ 172
Query: 455 HGNVELGEKVAQYLI-----DLDPLNHAFYVNLCDMYAKAG 490
+G E + YL+ ++ P N +V++ Y+ G
Sbjct: 173 NGLAS--EAIEVYLLMEEHEEIIP-NQGTWVSILPAYSHVG 210
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 257/450 (57%), Gaps = 12/450 (2%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G L A +F + + +++ MI + + ++ + LKL+ +M+ G P+
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMI------ARYSQSGYAEEALKLFSKMVQEGFKPNI 316
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
F L G +++G V K G+ DVF+ +S+I L+ CG R++FD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ ++VV WN+M+ GY +G L+ +LF + ++N SW +IJ G+++ + + LE+F
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVF 436
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+ S P+K T +SVL ACA + ++D G VHG + + G+ D+ +GTAL DM
Sbjct: 437 NTLLVSGQ----TPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDM 492
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREME-AEGVRPNHVT 376
Y KCG + + VF+ MP+K+ ++WT MI A +G+ E+ F EME V PN +
Sbjct: 493 YAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
+ +L AC+H GLV+KG W F M VY ++P HY C++D+LSR+G EAE IR++
Sbjct: 553 LLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTI 612
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
P +P+ W ALL GC+ + + ++ E+ A+ L L N A YV L ++YA AGR+ DV
Sbjct: 613 PFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVS 672
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R LM+E+G++K GCS VEV VH F
Sbjct: 673 NIRKLMREKGLKKS-GGCSWVEVRNQVHSF 701
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 190/372 (51%), Gaps = 45/372 (12%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ LKL+ ++L +G+ P+ +TF +++ C + D +G S+ G VVK G + V NS+I
Sbjct: 167 EALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLI 226
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
+L + G + AR +FD M RDVVSW A++ Y+ +GDL A +F M +RN SW++
Sbjct: 227 TLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSA 286
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I + Q G A EAL+LF +M V+E KP+ A LSA A L A+ G +HG++
Sbjct: 287 MIARYSQSGYAEEALKLFSKM----VQEGFKPNISCFACTLSALASLRALSAGINIHGHV 342
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG------ 353
+ G+D DV IG++L+D+Y KCG + VF + +K+ + W +M+ +++NG
Sbjct: 343 TKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXE 402
Query: 354 -------------YG------------KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+G ++ + F + G PN TF +L ACA
Sbjct: 403 ELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIA 462
Query: 389 LVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFV 444
++KG M H + ++ ++ + D+ ++ G ++++ MP E +
Sbjct: 463 SLDKG-----MNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP-EKNEIS 516
Query: 445 WGALLGGCQMHG 456
W ++ G G
Sbjct: 517 WTVMIQGLAESG 528
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 41/328 (12%)
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
Q+VK D+ V N +IS ++ G + AR+LFDEM R+ VSW+A+I G ++ G ++
Sbjct: 77 QIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEE 136
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
++ F R +N+ SW + I+GFV+ G EAL+LF + +E V+P+ +T SV+
Sbjct: 137 SMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRL----LESGVRPNDVTFTSVVR 192
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDC-------------------------------DVVI 310
AC LG G + G + ++G + DVV
Sbjct: 193 ACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVS 252
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
TA++D Y + G + A +F EMP+++ ++W+AMI+ ++ +GY +EA F +M EG
Sbjct: 253 WTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGF 312
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL--VEPHVYHYACMIDILSRAGLFSE 428
+PN F LSA A + G + HV ++ V+ + +ID+ + G +
Sbjct: 313 KPNISCFACTLSALASLRALSAG---INIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDD 369
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHG 456
RL+ + +E +V W +++GG ++G
Sbjct: 370 G-RLVFDLILEKNVVCWNSMVGGYSING 396
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/520 (32%), Positives = 290/520 (55%), Gaps = 55/520 (10%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A ++F + ++N M+ A A + L+++++M G+ P+ +
Sbjct: 91 GRMRDARHLFDRMSVRSYISWNTMVSAYAF------NYDCNGALEIFQRMESEGMEPNLV 144
Query: 139 TFPFLLK--------ECTKRLDGLV---GASVYGQV--VKFGVCDDV------------- 172
T+ L+ E L GL+ G V G+ V +C D+
Sbjct: 145 TWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYA 204
Query: 173 ---------FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
FV++++I ++ G V A LF EM N+ + SWNA+I + +G D AL
Sbjct: 205 VKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEAL 264
Query: 224 DLFRRMKKR--------NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
++F ++++ N+ SW++II GF GR +EALELF+ MQ + + + +T
Sbjct: 265 EIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKI----LANAVT 320
Query: 276 IASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP 335
I++VLS CA L A+ G+ +HG++ R+ + ++++G LV+MY KCGC++ + +F++
Sbjct: 321 ISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTE 380
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+KD ++W +MI+ + ++G G A +TF +M G +P+ VTFV +LS+C+HSGLV +GR
Sbjct: 381 RKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRR 440
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M Y +EP + HYACM+D+L RAGL EA ++++MP+ P+ VWGALL C+MH
Sbjct: 441 LFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMH 500
Query: 456 GNVELGEKVAQYLIDLDPL-NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
N E+ E+ A +L +L Y+ L ++YA +GR++D + R K +G++K PG
Sbjct: 501 NNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKN-PGQ 559
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
S ++V+ V+ FS + + E++ IL L+ M+ G
Sbjct: 560 SWIKVEKNVYTFSAGNNMQRGFEQIFEILEELTFQMEREG 599
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 150/289 (51%), Gaps = 12/289 (4%)
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMAC 185
++M G D TFP +++ C ++G +++G V++ G + V N +I ++
Sbjct: 31 RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKL 90
Query: 186 GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR----NIFSWNSII 241
G + AR LFD MS R +SWN M+ Y + D + AL++F+RM+ N+ +W S+I
Sbjct: 91 GRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLI 150
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
+ + + G EA+ELF M+ VE +A V+S CA LGA K +H Y +
Sbjct: 151 SSYARSGWHEEAMELFGLMRMKGVE----VSGEALAVVISICADLGAFVRAKIIHEYAVK 206
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
G + + +AL+ +YGK G V A+ +F EM K +W A+I+ A G EA +
Sbjct: 207 GGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEI 266
Query: 362 FREMEAEG----VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV 406
F ++E G +RPN V++ ++ A G ++ F M+H ++
Sbjct: 267 FSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKIL 315
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 130/274 (47%), Gaps = 18/274 (6%)
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
D T V+ ACAY+G+ GK +HG++ G + +G L+ MY K G + A +F
Sbjct: 41 DGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLF 100
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
M + ++W M+S +A N A + F+ ME+EG+ PN VT+ L+S+ A SG E
Sbjct: 101 DRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHE 160
Query: 392 KGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM----EPDVFVWGA 447
+ F +MR + VE A +I I + G F A ++I + E FV A
Sbjct: 161 EAMELFGLMR-MKGVEVSGEALAVVISICADLGAFVRA-KIIHEYAVKGGFEEYSFVKSA 218
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG- 506
L+ HG+V +++ + A + L +A+AG D+ + + ++ G
Sbjct: 219 LICVYGKHGDV---NGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGD 275
Query: 507 ---IRKEVPGCSSVEVDGVVHEFSMKGSPKVVKE 537
+R V S++ +DG F+ KG K E
Sbjct: 276 CPRLRPNVVSWSAI-IDG----FASKGREKEALE 304
>gi|9958072|gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/377 (41%), Positives = 224/377 (59%), Gaps = 5/377 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D+ + N++IS ++ G + AR LFD+M RDV+SWN ++ GY GD++ +F M
Sbjct: 36 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP 95
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+RN+FSWN +I G+ Q GR E L F+ M E V P+ T+ VLSACA LGA D
Sbjct: 96 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVD---EGSVVPNDATMTLVLSACAKLGAFD 152
Query: 291 HGKWVHGYLRRSGLD-CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
GKWVH Y G + DV + AL+DMYGKCG +E A VFK + ++D ++W MI+
Sbjct: 153 FGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGL 212
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A +G+G EA + F EM+ G+ P+ VTFVG+L AC H GLVE G F M + + P
Sbjct: 213 AAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPE 272
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI 469
+ H C++D+LSRAG ++A I MP++ D +W LLG +++ V++GE + LI
Sbjct: 273 IEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELI 332
Query: 470 DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMK 529
L+P N A +V L ++Y AGRFDD + + M++ G +KE G S +E D + +F
Sbjct: 333 KLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEA-GVSWIETDDGLVKFYSS 391
Query: 530 GSPKVVKEELVLILNGL 546
G EEL IL L
Sbjct: 392 GEKHPRTEELQRILREL 408
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 45/261 (17%)
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M ++VV W +MI GYL + DL A F +R+I WN++I+G+++ G EA LF
Sbjct: 1 MVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLF 60
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+M DV+ +++
Sbjct: 61 DQMPCR-------------------------------------------DVMSWNTVLEG 77
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVT 376
Y G +E VF +MP+++ +W +I +A NG E +F+ M EG V PN T
Sbjct: 78 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 137
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
+LSACA G + G+W + + V +ID+ + G A + + +
Sbjct: 138 MTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI 197
Query: 437 PMEPDVFVWGALLGGCQMHGN 457
D+ W ++ G HG+
Sbjct: 198 KRR-DLISWNTMINGLAAHGH 217
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G++ A VF IKR DL ++N MI A H + L L+ +M +GISPD +
Sbjct: 185 GAIEIAMEVFKGIKRRDLISWNTMINGLAAHG------HGTEALNLFHEMKNSGISPDKV 238
Query: 139 TFPFLLKECTKR---LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
TF +L C DGL A F + ++ V+ L GF+T A
Sbjct: 239 TFVGVLCACKHMGLVEDGL--AYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFI 296
Query: 196 DEMSNR-DVVSWNAMIIG----YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
++M + D V W A ++G Y + +VAL+ +++ RN ++ + + GR
Sbjct: 297 NKMPVKADAVIW-ATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRF 355
Query: 251 REALELFQEMQSSSVEE 267
+A L M+ + ++
Sbjct: 356 DDAARLKVAMRDTGFKK 372
>gi|414878289|tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea mays]
Length = 534
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 275/507 (54%), Gaps = 41/507 (8%)
Query: 75 LSVSGSLSYATNVFSHIKRS---DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
++ S S +A VF + + ++Y + I A A +S + G L L++ ML
Sbjct: 29 IASSHSPGHARAVFDNAVPTACENVYLWTATIAAYARHASSSPSVAEG-ALTLFRLMLRH 87
Query: 132 GIS-PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGV---------------------- 168
G+ P+ T +++ C+ VG V+G +V G+
Sbjct: 88 GVPRPNAFTASSVVRCCSALRAVRVGIQVHGFLVNAGLGRAEHVRAALVDMYGNHGRVAD 147
Query: 169 ---------CDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
V + N++++ ++ G V S R++FD M RD++SWN +++GYLR G
Sbjct: 148 ARRVFDEMSATSVVLGNTMVACYVRAGDVESGRVVFDRMVERDLISWNTLMMGYLRQGGA 207
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
VA +LF M RN+ SWN I + Q +A+ +F M+ + + PD T+A +
Sbjct: 208 GVARELFEEMPDRNVNSWNMAIAAYSQERSWADAVAVFNRMRLARFQ----PDPATMAVL 263
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
+SACA LG++ + VHG LR+ ++ + + +L+DMY KCG + +A+ +F E KDT
Sbjct: 264 MSACAQLGSLSVARQVHGILRKGCVEMNFHVLNSLIDMYAKCGSISQAHLLFVETHLKDT 323
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+++ MI A +G+G++A F EM E ++P+ VT +G+LSACAH+GLV G++ F
Sbjct: 324 VSYNVMICALARHGHGRDALQVFDEMSKERLQPDAVTLLGVLSACAHAGLVHDGKFYFES 383
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M+ Y +E HYACM+D+ RAGL EA L R+MPMEP VWGAL+ C+ H NVE
Sbjct: 384 MKTNYAIEQSPDHYACMVDLYGRAGLIKEAYELARAMPMEPHAGVWGALINACRKHCNVE 443
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
+G+ A+ LI ++P N YV L + A+ +++ V+ M+ +GI K GCS +EV
Sbjct: 444 VGKVAARELIAIEPRNPGTYVLLANTLARGQQWEFVETVWQSMRGKGIEK-TAGCSWLEV 502
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGL 546
+ VVHEF M S +E+ IL L
Sbjct: 503 ENVVHEFLMGESSHPNSDEIYSILEHL 529
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 275/503 (54%), Gaps = 24/503 (4%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C +RE + + ++ + +L+T + + +G + A +F I D+
Sbjct: 233 CSGVREARRLFDEMPE---------RNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVI 283
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
++ MI K + L++Y+ ML TG P+ + L+ C + + G
Sbjct: 284 SWGTMIDGYIQKGRLR------EALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGW 337
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++G VVK G F+Q ++I + ACG + A + F+ + SWNA+ G++++G
Sbjct: 338 QLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNG 397
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
+D AL F +M R++FSW+++I+G+ Q + ALELF +M + + KP+++T+
Sbjct: 398 MMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGI----KPNEVTMV 453
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
SV SA A LG + GK H Y+R + + + AL+DMY KCG + A F ++ +
Sbjct: 454 SVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDE 513
Query: 338 --DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
W A+I A +G+ + F +M+ ++PN +TF+G+LSAC H+GLVE G+
Sbjct: 514 VSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKR 573
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M+ Y VEP + HY CMIDIL RAGL EAE +IRSMPME D+ +WG LL C+ H
Sbjct: 574 IFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTH 633
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
GNV +GE+ A+ L L P + V L ++YA AG++++V R++M+ + + +E PG S
Sbjct: 634 GNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDRE-PGYS 692
Query: 516 SVEVDGVVHEFSMKGSPKVVKEE 538
+ M GS V++++
Sbjct: 693 GFVAGSDLDR--MSGSSGVIRDK 713
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 208/421 (49%), Gaps = 46/421 (10%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L+++K M G+ P+ LT ++ C+ + L V+G VVK V V V +++
Sbjct: 168 EALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLM 227
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
+ C V AR LFDEM R++V+WN M+ GY ++G +D A +LF + +++ SW +
Sbjct: 228 HAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGT 287
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+I G++Q GR REALE+++ M ++ P+++ I +++SAC AI G +HG +
Sbjct: 288 MIDGYIQKGRLREALEIYRAM----LQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTV 343
Query: 300 RRSGLDCDVVIGTALVDMYGKCG-----CVERAYGV------------------------ 330
+ G DC I T ++ Y CG C++ GV
Sbjct: 344 VKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHAL 403
Query: 331 --FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
F +M +D +W+ MIS +A + + K A + F +M A G++PN VT V + SA A G
Sbjct: 404 KTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLG 463
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHY-ACMIDILSRAGLFSEAERLIRSMPME-PDVFVWG 446
+++G+ MR + P + A +ID+ ++ G + A + + E V W
Sbjct: 464 TLQEGKLAHEYMRSESI--PFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWN 521
Query: 447 ALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
A++ G HG+ +E+ + ++ I +P+ ++ C AG + K+ M
Sbjct: 522 AIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSAC---CHAGLVESGKRIFKTM 578
Query: 503 K 503
K
Sbjct: 579 K 579
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 46/270 (17%)
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG---------- 322
++ + S L +C+ L I G+ +H + + GL + I +L++MY KCG
Sbjct: 53 ELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFD 112
Query: 323 ---------C------------VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
C ++ A +F MP K +++T MI F NG+ +EA +
Sbjct: 113 GFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEV 172
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY-----LVEPHVYHYACM 416
F++M + GV PN +T V ++SAC+H G V R ++ ++ +V ++ H C+
Sbjct: 173 FKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCL 232
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
+ EA RL MP E ++ W +L G G V+ ++ + D D ++
Sbjct: 233 CSGV------REARRLFDEMP-ERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVIS- 284
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
+ + D Y + GR + + M + G
Sbjct: 285 --WGTMIDGYIQKGRLREALEIYRAMLQTG 312
>gi|357141789|ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Brachypodium distachyon]
Length = 555
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/491 (35%), Positives = 277/491 (56%), Gaps = 23/491 (4%)
Query: 22 PNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
P++ + +L++A R ++H Q ++ L D + T L + A + S+
Sbjct: 76 PDRFTFPSLLKSASRLASFPRTGAQVHAQAVRRGLLV--DVFVVNTLLAMYAAFRDTRSM 133
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDCLTF 140
+ + + +DL T+N M+ K E G+ ++++QM G+S +
Sbjct: 134 REVFDSCAGV--ADLVTWNTML-GGYVKCGEI-----GEARRVFEQMPQRNGVSWSAMVG 185
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
+ LD V ++ ++ G +V NS+I+ F G + AR +FDEM
Sbjct: 186 AY---AGAGELD--VAREMFDEMPAIG--RNVVSWNSMITGFARHGLLPLARKMFDEMPV 238
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
R++VSWN M+ GY +G+++ A +LF RM ++++ SW +I+G+ Q E LELF+ M
Sbjct: 239 RNLVSWNTMVRGYAVNGEMNDARELFDRMPEKDVVSWTCMISGYAQARCYTETLELFRAM 298
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG--LDCDVVIGTALVDMY 318
QS E V P+++T+ SVLSACA+L A++ G+W H ++ + LD + +G AL+DMY
Sbjct: 299 QS---ESNVLPNEVTMVSVLSACAHLTALEEGRWAHAFIDKHKMVLDSEFNLGAALIDMY 355
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + A +F + +K+ AW A+I+ A+NG + + D F +M G +PN +TFV
Sbjct: 356 SKCGRTDLAVKIFHSLDQKNVSAWNALITGLAVNGDVRSSIDVFEQMRRSGEKPNGITFV 415
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L+ACAH GLV++GR CF M V+P HY CM+D+L RAGL EAE LIRSMPM
Sbjct: 416 GVLTACAHGGLVDEGRRCFQSMASTCGVQPEAKHYGCMVDMLGRAGLLEEAEELIRSMPM 475
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
PDV + GALLG C+MH V++ +V ++ L +V + D+YA AG++ D
Sbjct: 476 VPDVMILGALLGACRMHKRVDVAARVQNEILGLSTQQSGCHVLISDIYAAAGKWADALYA 535
Query: 499 RNLMKERGIRK 509
R ++++ GI K
Sbjct: 536 RGVLQKFGISK 546
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 195/383 (50%), Gaps = 23/383 (6%)
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
S A+ F S + +N++IRA+A S + +L +G +PD TFP
Sbjct: 29 SAASLYFPLFPSSCTFLHNLLIRASATSPSPR------LAFAAFSSILRSGDTPDRFTFP 82
Query: 142 FLLKECTKRLDGL--VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
LLK + RL GA V+ Q V+ G+ DVFV N++++++ A S R +FD +
Sbjct: 83 SLLKSAS-RLASFPRTGAQVHAQAVRRGLLVDVFVVNTLLAMYAAFRDTRSMREVFDSCA 141
Query: 200 N-RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D+V+WN M+ GY++ G++ A +F +M +RN SW++++ + G A E+F
Sbjct: 142 GVADLVTWNTMLGGYVKCGEIGEARRVFEQMPQRNGVSWSAMVGAYAGAGELDVAREMFD 201
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM + + + ++ S+++ A G + + + + L V +V Y
Sbjct: 202 EMPA------IGRNVVSWNSMITGFARHGLLPLARKMFDEMPVRNL----VSWNTMVRGY 251
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTF 377
G + A +F MP+KD ++WT MIS +A E + FR M++E V PN VT
Sbjct: 252 AVNGEMNDARELFDRMPEKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTM 311
Query: 378 VGLLSACAHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
V +LSACAH +E+GRW + +H +++ A +ID+ S+ G A ++ S+
Sbjct: 312 VSVLSACAHLTALEEGRWAHAFIDKHKMVLDSEFNLGAALIDMYSKCGRTDLAVKIFHSL 371
Query: 437 PMEPDVFVWGALLGGCQMHGNVE 459
+ +V W AL+ G ++G+V
Sbjct: 372 D-QKNVSAWNALITGLAVNGDVR 393
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/520 (34%), Positives = 272/520 (52%), Gaps = 47/520 (9%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHI-KRSDL 96
++ +K++H + +++ H L LLF A + L YA V + + D
Sbjct: 29 APSLATVKQLHARALRAGVPPA--HPLLAKHLLFHLASLRAPPLRYAVAVLTRVLPDPDP 86
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
++ N ++R A S + L L+ + L PD T+P LL+ C + L G
Sbjct: 87 FSLNTVLRIAASSSRPS------LALALHARRLA---PPDTHTYPPLLQACARLLSLRHG 137
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++ + K G+ VFV+NS++ L+ ACG SA +FDE+
Sbjct: 138 ERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIP----------------- 180
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
+ +RN+ SWNS++ GF GR E L +F+EM ++ PD T+
Sbjct: 181 ------------VGERNLVSWNSMLNGFAANGRPNEVLTIFREM----LDVNFMPDGFTV 224
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM-P 335
SVL+A A +GA+ G+ VH YL + GL + +G AL+D+Y KCG VE A VF+EM
Sbjct: 225 VSVLTASAEIGALALGRRVHVYLTKVGLVENSHVGNALIDLYAKCGGVEDARRVFEEMGA 284
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
++ ++WT++I A+NG+GKEA + F ME E + P +T VG+L AC+H GLV+ G
Sbjct: 285 RRTVVSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITMVGVLYACSHCGLVDDGFM 344
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M+ Y + P + H CM+D+L RAG EA I +MP+EP+ VW LLG C MH
Sbjct: 345 YFNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILTMPLEPNAVVWRTLLGACAMH 404
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
+ELGE L++LDP + YV L ++YA GR+ DV R M + G+RK PG S
Sbjct: 405 KKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADVHVLRKTMVKDGVRKN-PGRS 463
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
VE+ V+EF M E++ +L ++ ++ G+
Sbjct: 464 LVELRNSVYEFVMGDRSHPESEQIYQMLAEVADSLRREGY 503
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 165/392 (42%), Gaps = 70/392 (17%)
Query: 18 KVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSV 77
+++PP+ + +L+ A ++R + IH + K+ + + L C L
Sbjct: 112 RLAPPDTHTYPPLLQ-ACARLLSLRHGERIHAEAAKNGLATLVFVKNSLVHLYGACGLFE 170
Query: 78 SGSLSYATNVFSHIK--RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S A VF I +L ++N M+ A + + L ++++ML P
Sbjct: 171 S-----AHRVFDEIPVGERNLVSWNSMLNGFAA------NGRPNEVLTIFREMLDVNFMP 219
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D T +L + +G V+ + K G+ ++ V N++I L+ CG V AR +F
Sbjct: 220 DGFTVVSVLTASAEIGALALGRRVHVYLTKVGLVENSHVGNALIDLYAKCGGVEDARRVF 279
Query: 196 DEM-SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
+EM + R VVSW ++I+G + GF +EAL
Sbjct: 280 EEMGARRTVVSWTSLIVGL--------------------------AVNGF-----GKEAL 308
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA- 313
ELF M+ E + P +IT+ VL AC++ G +D G Y R + ++
Sbjct: 309 ELFGIME----REKLVPTEITMVGVLYACSHCGLVDDGFM---YFNRMKEEYNIAPRIEH 361
Query: 314 ---LVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG---YGKEAFDTFREME 366
+VD+ G+ G V+ AY MP + + + W ++ A++ G+ A+ E++
Sbjct: 362 LGCMVDLLGRAGKVKEAYDYILTMPLEPNAVVWRTLLGACAMHKKLELGEAAWARLVELD 421
Query: 367 AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
G ++V L +A GRW V
Sbjct: 422 P-GHSGDYVLLSNLYAAV--------GRWADV 444
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/428 (36%), Positives = 248/428 (57%), Gaps = 10/428 (2%)
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
SL A VF + D+ ++ ++ A ++ ++ C + ++ G+ P+ +T
Sbjct: 193 SLDDAGKVFDEMPERDVVSWTTLVDGYA-RAGLADEAWRLFC----RMVVVGGMRPNAVT 247
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
+ + G ++ V + GV V + N+++ +F CG V AR +FD M
Sbjct: 248 LVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGME 307
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+DV SW +M+ Y + GDL+ A LF+ M +RN+ SW+ +I + Q + EA+ LF+E
Sbjct: 308 VKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFRE 367
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH-GYLRRSGLDCDVVIGTALVDMY 318
M ++ V+ P T+ SVLSACA LG +D G+W++ Y+ + + V +G AL+DM+
Sbjct: 368 MIAAGVD----PIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMF 423
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG V A +F EM +++ ++W MI A++G +EA F +++ E + P+ +TF+
Sbjct: 424 AKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFL 483
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
GLL++C+HSGLV +GR F M Y +EP V HYACMID+L + GL EA + R MPM
Sbjct: 484 GLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPM 543
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
E D WGALL C+MHGNVE+G VA L++LDP + YV + +YA ++D VK
Sbjct: 544 EADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKML 603
Query: 499 RNLMKERG 506
R M++RG
Sbjct: 604 RMTMRDRG 611
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 209/492 (42%), Gaps = 92/492 (18%)
Query: 11 SLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL 70
++L PA + N T +L + ++ C + R L ++H ++ L N + L
Sbjct: 19 AVLPRPAWNTNRNLVVTHPLL-SLLESCASFRRLLQLHA-LLTVTGLAGNGFPAF--GFL 74
Query: 71 FFCALSVSGSLSYATNVFSHIKRS-DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
FCALS L++A + + + Y M+R + L L+++++
Sbjct: 75 AFCALSTPPRLAHAAAILARASPGPNAYMLGTMMRGF------LRARLPARALGLFRRVV 128
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYG------QVVKFG-VCDDVFVQNSVISLF 182
+ D TF F +K + G + G +K G V + V V N+++ +
Sbjct: 129 RDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFY 188
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
+ A +FDEM RDVVSW ++ GY R+G D A LF RM
Sbjct: 189 ANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRM------------- 235
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
V GG ++P+ +T+ + +SA +G + G +H Y+
Sbjct: 236 -VVVGG--------------------MRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEG 274
Query: 303 GLDCDVVIGTALVDMYGKCGCV-------------------------------ERAYGVF 331
G+ V + ALVDM+GKCGCV E A +F
Sbjct: 275 GVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLF 334
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVE 391
K+MP+++ ++W+ MI+ ++ +EA FREM A GV P T V +LSACA G ++
Sbjct: 335 KDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLD 394
Query: 392 KGRWCFVMMRHVYLVEPHVYHYA----CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GRW + Y+V + +ID+ ++ G EA +L M E +V W
Sbjct: 395 LGRWIY----ENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMA-ERNVVSWNT 449
Query: 448 LLGGCQMHGNVE 459
++ +HG E
Sbjct: 450 MIMAHAVHGQSE 461
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 258/443 (58%), Gaps = 15/443 (3%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G + A +F + D+ ++ MI N H L +Y+ ML +G++ +
Sbjct: 480 AGLVDMARELFERVPDKDVISWGTMIDGYIL----MNRLHEA--LVMYRAMLRSGLALNE 533
Query: 138 LTFPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
+ L+ C RL+ + G ++G VVK G F+Q ++I + ACG + A + F+
Sbjct: 534 ILVVNLVSACG-RLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFE 592
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
+ + SWNA++ G++++ +D A +F M +R++FSW+++I+G+ Q ++R ALEL
Sbjct: 593 VGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALEL 652
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F +M +S + KP+++T+ SV SA A LG + G+W H Y+ + + + AL+D
Sbjct: 653 FHKMVASGI----KPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALID 708
Query: 317 MYGKCGCVERAYGVFKEMPKK--DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
MY KCG + A F ++ K W A+I A +G+ D F +M+ ++PN
Sbjct: 709 MYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNP 768
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+TF+G+LSAC H+GLVE GR F +M+ Y VEP + HY CM+D+L RAGL EAE +IR
Sbjct: 769 ITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIR 828
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
SMPM+ D+ +WG LL C+ HG+V +GE+ A+ L L P + V L ++YA AGR++D
Sbjct: 829 SMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWED 888
Query: 495 VKKTRNLMKERGIRKEVPGCSSV 517
V R ++ + + + +PGCS V
Sbjct: 889 VSLVRRAIQNQRMER-MPGCSGV 910
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/551 (24%), Positives = 247/551 (44%), Gaps = 92/551 (16%)
Query: 23 NKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTND--HHSLIT-----------RL 69
N +L L +A+ C + + +++H+ ++K L +N +SLI +L
Sbjct: 267 NHYECELALVSALKYCSSSSQGRQLHSLVLKLG-LHSNTFIQNSLINMYAKRGSIKDAQL 325
Query: 70 LF--------------FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA---NACKSSE 112
LF C + +G L A +F + +Y MI N C
Sbjct: 326 LFDACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFR-- 383
Query: 113 TNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDV 172
+ L+++K M G+ P+ LT ++ C+ + L ++ +K V V
Sbjct: 384 -------EALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLV 436
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
V +++ + C V AR LFD M ++VSWN M+ GY ++G +D+A +LF R+ +
Sbjct: 437 LVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDK 496
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
++ SW ++I G++ R EAL +++ M S + ++I + +++SAC L AI G
Sbjct: 497 DVISWGTMIDGYILMNRLHEALVMYRAMLRSGLAL----NEILVVNLVSACGRLNAIGDG 552
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCG------------------------------ 322
+HG + + G DC I T ++ Y CG
Sbjct: 553 WQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKN 612
Query: 323 -CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
V++A +F +MP++D +W+ MIS +A + A + F +M A G++PN VT V +
Sbjct: 613 RMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVF 672
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHV----YHYACMIDILSRAGLFSEAERLIRSMP 437
SA A G +++GRW H Y+ + A +ID+ ++ G + A + +
Sbjct: 673 SAIATLGTLKEGRWA-----HEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIR 727
Query: 438 MEP-DVFVWGALLGGCQMHGN----VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
+ V W A++ G HG+ +++ + +Y I +P+ ++ C AG
Sbjct: 728 DKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSAC---CHAGLV 784
Query: 493 DDVKKTRNLMK 503
+ ++ +MK
Sbjct: 785 EPGRRIFRIMK 795
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 244/436 (55%), Gaps = 45/436 (10%)
Query: 132 GISPDCLTFPFLLKECTKRLDGLV-GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
G+ P L P K C DGLV G ++ + G+ +VFV +S IS++ CG
Sbjct: 7 GLLPGPLHLPVGFKSCAA-TDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDD 65
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRR---------------------- 228
A +F+EM RDVVSWNAMI G+ +G A+D+FR
Sbjct: 66 AYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMG 125
Query: 229 ----------------MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
M+ + + SWN+++ + EA+ELF MQ +E PD
Sbjct: 126 KARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIE----PD 181
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+T+A+VL +C + A+ GK +H ++R + +++ AL+DMY CGC++ A VF
Sbjct: 182 AVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFD 241
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
M +D ++WT++IS + +G+G+EA D F +M +G+ P+ + FV +L+AC+H+GL++
Sbjct: 242 SMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDM 301
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G+ F M + + P + HYACM+D+L RAG EA I MP++P+ VWGALLG C
Sbjct: 302 GKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGAC 361
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
++H N+++G A L+ L P +YV L ++YA+AGR+ DV R++M+ +GI+K +P
Sbjct: 362 RIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKK-LP 420
Query: 513 GCSSVEVDGVVHEFSM 528
G S+ E+ VH F +
Sbjct: 421 GVSNAELGDRVHTFHI 436
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 137/319 (42%), Gaps = 55/319 (17%)
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKE 146
VF ++ L ++N M+ + TN+ + ++L+ +M GI PD +T +L
Sbjct: 138 VFDEMRFKGLISWNAML------AVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPS 191
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
C + +G ++ + + +C + ++N+++ ++ CG + AR +FD M RDVVSW
Sbjct: 192 CGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSW 251
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
++I Y R G REA++LF++M +E
Sbjct: 252 TSIISAYGRHG-------------------------------HGREAIDLFEKMCGQGLE 280
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGK-WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
PD I ++L+AC++ G +D GK + + + + +VD+ G+ GC+
Sbjct: 281 ----PDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIR 336
Query: 326 RAYGVFKEMP-KKDTLAWTAMISVFALNG---YGKEAFDTFREMEAEGVRPNHVTFVGLL 381
AY MP K + W A++ ++ G A D+ + P + LL
Sbjct: 337 EAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLA-----PKQTGYYVLL 391
Query: 382 SACAHSGLVEKGRWCFVMM 400
S GRW V M
Sbjct: 392 SNI----YARAGRWADVSM 406
>gi|125540362|gb|EAY86757.1| hypothetical protein OsI_08137 [Oryza sativa Indica Group]
Length = 493
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/409 (38%), Positives = 231/409 (56%), Gaps = 38/409 (9%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
PD L+ F L C++ V + V+ V+ G DV+V N+ S + A V SA L
Sbjct: 69 PDHLSLSFSLHPCSRLPSHPVASVVHSLAVRLGHARDVYVVNAAASAYFAAADVASAERL 128
Query: 195 ---------------------------------FDEMSNRDVVSWNAMIIGYLRSGDLDV 221
FD M ++VVSWN M+ Y R+G L
Sbjct: 129 FSEASRDVADVVTWTTMVTGHANAGDVERARWFFDAMPEKNVVSWNTMLGAYARAGMLPK 188
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
A LF RM RN +W S+ITG +Q EAL +F +M + V P++ + S +S
Sbjct: 189 ARKLFDRMPSRNAATWGSMITGLLQSDHCEEALRVFSDMVACG----VVPNEPALVSTVS 244
Query: 282 ACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
AC L ++HG WVHGY R V+ TA+VDMYGKCG + A VF MP ++
Sbjct: 245 ACTQLRWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKCGSIRDAVRVFAAMPVRNIY 304
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+W +MI+ A+NG ++A F +M+ GVRPN +TF+GLLSAC+HSGLV++GRW F M
Sbjct: 305 SWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSACSHSGLVDEGRWLFYKM 364
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
+ + ++P HY M+D+L R+G EA ++SMP+EP +WGAL G C++HG VEL
Sbjct: 365 VNHFGIQPVPEHYGLMVDLLGRSGHVREAVDFVKSMPVEPHPGLWGALAGACKIHGEVEL 424
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
GE+VA+ LI+L+P + + Y+ L ++YA + R+DD+ R ++K+R + K
Sbjct: 425 GEEVAKKLIELEPQHGSRYILLSNIYATSNRWDDMANVRRILKDRKVPK 473
>gi|224141025|ref|XP_002323875.1| predicted protein [Populus trichocarpa]
gi|222866877|gb|EEF04008.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 262/454 (57%), Gaps = 22/454 (4%)
Query: 36 DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSD 95
+ C +M LK+IH S +DH ++ ++L F A+S SG L+YA +F + +
Sbjct: 3 EACNSMSRLKQIHAH---SLLAGLHDHSIILAKMLRFAAVSPSGDLAYAQRLFDQLPHPN 59
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLK-------ECT 148
+ YN +IR A S + H L QM G+ PD TF FL+K
Sbjct: 60 TFFYNTLIRGYAKSSIPSYSLH------LVNQMRQNGVDPDEFTFNFLIKARSRVRVNIN 113
Query: 149 KRLDGLVGAS-VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWN 207
+ L +V ++G V+K G +FV+N++I L+ A G A +FDE DVVSW+
Sbjct: 114 RNLPLVVECDEIHGAVLKLGFSSHLFVRNALIHLYAARGNPVVAWRVFDETVGVDVVSWS 173
Query: 208 AMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
+++ ++R+G+L+ A +F +M +R++ SW ++++ + Q +REALEL+ M +++
Sbjct: 174 GLVLAHVRAGELERARWVFDQMPERDVVSWTTMVSAYSQAKYSREALELYVTM----LDK 229
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
V+PD++T+ SV+SAC LG + G VH Y+ +G V + AL+DMY KCGC++RA
Sbjct: 230 GVRPDEVTLVSVISACTNLGDLQMGYSVHSYIDENGFRWMVSLCNALIDMYAKCGCMDRA 289
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
+ VF M +K + W +MIS A N ++AF F M GV P+ VTF+ +L+A AH
Sbjct: 290 WQVFNSMSRKSLVTWNSMISACANNRNPEDAFGLFSRMFNYGVAPDGVTFLAVLTAYAHV 349
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GLV++G F M+ + +E + HY C++++L +AG EA LI SMP+ + VWG
Sbjct: 350 GLVDEGYRLFESMQRDHGIEARIEHYGCVVNMLGQAGWLEEAFELITSMPLPSNDVVWGV 409
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
LL C+ HG+V +GE+V + L++L L+ +Y +
Sbjct: 410 LLAACRKHGDVYMGERVVKKLLELK-LDGGYYTS 442
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 122/307 (39%), Gaps = 62/307 (20%)
Query: 216 SGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKIT 275
SGDL A LF ++ N F +N++I G+ + +L L +M+ + V+ PD+ T
Sbjct: 42 SGDLAYAQRLFDQLPHPNTFFYNTLIRGYAKSSIPSYSLHLVNQMRQNGVD----PDEFT 97
Query: 276 IASVLSACAY--------LGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
++ A + L + +HG + + G + + AL+ +Y G A
Sbjct: 98 FNFLIKARSRVRVNINRNLPLVVECDEIHGAVLKLGFSSHLFVRNALIHLYAARGNPVVA 157
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
+ VF E D ++W+ GL+ A +
Sbjct: 158 WRVFDETVGVDVVSWS-----------------------------------GLVLAHVRA 182
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM---PMEPDVFV 444
G +E+ RW F M E V + M+ S+A EA L +M + PD
Sbjct: 183 GELERARWVFDQMP-----ERDVVSWTTMVSAYSQAKYSREALELYVTMLDKGVRPDEVT 237
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC----DMYAKAGRFDDVKKTRN 500
+++ C G++++G V Y+ D + V+LC DMYAK G D + N
Sbjct: 238 LVSVISACTNLGDLQMGYSVHSYI---DENGFRWMVSLCNALIDMYAKCGCMDRAWQVFN 294
Query: 501 LMKERGI 507
M + +
Sbjct: 295 SMSRKSL 301
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 230/356 (64%), Gaps = 7/356 (1%)
Query: 173 FVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
FV+NS+I ++ACG V +AR +FDEM +DV+SW ++++ Y RSGD+ A ++F R +
Sbjct: 178 FVENSLIGAYVACGDVGAARKVFDEMVEKDVISWTSIVVAYTRSGDMRSAEEVFGRCPVK 237
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
++ +W +++TG+ Q +ALE+F M E + D++++ +SACA LGA+
Sbjct: 238 DMVAWTAMVTGYAQNAMPVKALEVFDRM----AELGMVIDEVSLTGAISACAQLGALRRA 293
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
WV R+G +VV+G+ LVDMY KCG ++ A VF M +K+ +++MI+ A +
Sbjct: 294 AWVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASH 353
Query: 353 GYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
G EA F+EM V PNHVTF+G+L+AC+H+G+V +GR+ F M+ Y + P
Sbjct: 354 GRASEAIALFKEMVNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDKYGIMPSAD 413
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
HYACM+D+L RAGL EA L+RSM + P VWGALLG C++HG E+ + VA++L L
Sbjct: 414 HYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGALLGACRIHGKSEIAKVVAEHLFKL 473
Query: 472 DPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE-VDGVVHEF 526
+P + YV L ++ A AG++++V K R LM+++ ++K+ P S E DG+VH+F
Sbjct: 474 EPESIGNYVLLSNILASAGKWEEVSKVRILMRKQRLKKD-PAVSLFEGRDGLVHQF 528
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 116/277 (41%), Gaps = 49/277 (17%)
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
R+ F NS+I +V G A ++F EM
Sbjct: 175 RHRFVENSLIGAYVACGDVGAARKVFDEM------------------------------- 203
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
++ DV+ T++V Y + G + A VF P KD +AWTAM++ +A
Sbjct: 204 ------------VEKDVISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQ 251
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
N +A + F M G+ + V+ G +SACA G + + W + +V
Sbjct: 252 NAMPVKALEVFDRMAELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGN-NVV 310
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI-- 469
+ ++D+ ++ GL EA ++ M E +V+ + +++ G HG + + ++
Sbjct: 311 VGSGLVDMYAKCGLIDEASKVFYGM-QEKNVYTYSSMIAGLASHGRASEAIALFKEMVNR 369
Query: 470 -DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
+++P NH ++ + + AG + + MK++
Sbjct: 370 ANVEP-NHVTFIGVLTACSHAGMVGEGRYYFAQMKDK 405
>gi|218193370|gb|EEC75797.1| hypothetical protein OsI_12731 [Oryza sativa Indica Group]
Length = 523
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 175/518 (33%), Positives = 273/518 (52%), Gaps = 20/518 (3%)
Query: 12 LLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF 71
LL S A +S L L + +C +M L+++H ++KS + +R +
Sbjct: 21 LLPSSASISAFLASHPALTLLH--TQCASMAHLRQLHAALVKSGLARDP---IAASRAVA 75
Query: 72 FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
FCA +YA + H R + + +N IRA A + G + L+ ML +
Sbjct: 76 FCA-GDGRDAAYAARLVRHHPRPNAFMWNTAIRALA------DGPGPGAAVALFVDMLGS 128
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
P+ TFP L + GA ++G VVK G+ D +V+NSVI+++ + G A
Sbjct: 129 PTPPERRTFPSLFAAYARLGRAGDGAGLHGMVVKLGLGGDAYVRNSVIAMYASRGAADEA 188
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
L D V+ N+ I+ R+G +D A +F M R + +W+++++ + + R
Sbjct: 189 IALLARCEAFDAVACNSAIVALARAGRVDEARAVFDGMPARTVATWSAMVSAYSRDSRCH 248
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
+A+ELF MQ+ VE P+ + SVL CA LGA++ G WVH Y+ + + + ++
Sbjct: 249 DAVELFSAMQAEGVE----PNANVLVSVLGCCASLGALEQGAWVHAYIDKHDVAMNALVV 304
Query: 312 TALVDMYGKCGCVERAYGVF---KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
TALVDMY KCG + +A VF + + +W +M+ A++G +EA F E+
Sbjct: 305 TALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWNSMMLGHAVHGQWREAAALFSELRPH 364
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
G+RP++VTF+ +L A HSG+ ++ + M + V P V HY C++D L+RAG E
Sbjct: 365 GLRPDNVTFIAILMAYGHSGMADEAKAVLASMASEHGVVPGVEHYGCLVDALARAGRLRE 424
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
AE +I +MP+ PD VWGALL GC++HG+ E + A+ + DP + YV A+
Sbjct: 425 AEGVIAAMPVAPDAAVWGALLSGCRLHGDAEAAARAAREAVRCDPRDSGAYVLAASALAR 484
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
G R M+E G+ K VPGCS +EVDGVVHEF
Sbjct: 485 GGEARRGAAVRGRMREEGVGK-VPGCSMIEVDGVVHEF 521
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 191/568 (33%), Positives = 297/568 (52%), Gaps = 78/568 (13%)
Query: 20 SPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTND--HHSLIT---------- 67
+ PN+ + I ++ + + E K++H ++K L+ N H SLI
Sbjct: 124 TEPNEYTFPSIFKSCT-KIRGAHEGKQVHAHVLKLG-LEHNAFVHTSLINMYAQNGELVN 181
Query: 68 -RLLF----------FCAL----SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSE 112
RL+F F AL + G L A +F I D+ ++N MI A
Sbjct: 182 ARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYA----- 236
Query: 113 TNDTHSGK---CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVC 169
SG+ + +++M ++P+ T +L C + G ++ G
Sbjct: 237 ----QSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQS----------GSSLQLG-- 280
Query: 170 DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
N V S G ++ R++ N +I Y++ GDL+ A +LF ++
Sbjct: 281 ------NWVRSWIEDRGLGSNIRLV------------NGLIDMYVKCGDLEEASNLFEKI 322
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
+ +N+ SWN +I G+ +EAL LF+ M S+++ P+ +T S+L ACA LGA+
Sbjct: 323 QDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNID----PNDVTFLSILPACANLGAL 378
Query: 290 DHGKWVHGYLRRS--GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMIS 347
D GKWVH Y+ ++ + V + T+L+DMY KCG + A +F M K W AMIS
Sbjct: 379 DLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMIS 438
Query: 348 VFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
FA++G+ A F M +EG P+ +TFVG+L+AC H+GL+ GR F M Y V
Sbjct: 439 GFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVS 498
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY 467
P + HY CMID+ RAGLF EAE L+++M M+PD +W +LLG C++H +EL E VA++
Sbjct: 499 PKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKH 558
Query: 468 LIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFS 527
L +L+P N + YV L ++YA AGR++DV K R + + ++K VPGCSS+EVD VVHEF
Sbjct: 559 LFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKK-VPGCSSIEVDSVVHEFL 617
Query: 528 MKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ E+ +L+ + ++ GF
Sbjct: 618 VGDKVHPQSNEIYKMLDEIDMRLEKAGF 645
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 255/457 (55%), Gaps = 22/457 (4%)
Query: 5 LQMVSYSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHS 64
LQ++S+S + P K+ + T L CK ++ LK+IH+QIIK+ T H
Sbjct: 11 LQVLSFSDPSPPYKLVHDHPSLTLL------SNCKTLQTLKQIHSQIIKTGLHNT---HF 61
Query: 65 LITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKL 124
+++L+ FCA+S G LSYA ++F I+ + +N MIR SSE+ L+
Sbjct: 62 ALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRG--LSSSES----PFLALEY 115
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMA 184
Y M+ +G P+ TFP + K CTK G V+ V+K G+ + FV S+I+++
Sbjct: 116 YVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQ 175
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
G + +AR++FD+ S RD VS+ A+I GY G LD A +LF + R++ SWN++I+G+
Sbjct: 176 NGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGY 235
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG-AIDHGKWVHGYLRRSG 303
Q GR EA+ F+EM+ + V P+ T+ SVLSACA G ++ G WV ++ G
Sbjct: 236 AQSGRVEEAMAFFEEMRRAK----VTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRG 291
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
L ++ + L+DMY KCG +E A +F+++ K+ ++W MI + KEA FR
Sbjct: 292 LGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFR 351
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM-RHVYLVEPHVYHYACMIDILSR 422
M + PN VTF+ +L ACA+ G ++ G+W + +++ ++ V + +ID+ ++
Sbjct: 352 RMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAK 411
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
G + A+R+ M + + W A++ G MHG+ +
Sbjct: 412 CGDLAVAKRIFDCMNTK-SLATWNAMISGFAMHGHTD 447
>gi|15220333|ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g04840
gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17 [Arabidopsis thaliana]
gi|332189629|gb|AEE27750.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/576 (32%), Positives = 307/576 (53%), Gaps = 47/576 (8%)
Query: 14 NSPAKVS-PPNKEST--KLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL 70
+SPAK+ P +++++ + + I CK+ L+ +H QI++ L + L++
Sbjct: 12 SSPAKIYFPADRQASPDESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVS--- 68
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
C+ S+ S Y+ ++F + + + + N +IR T + ++ + ML
Sbjct: 69 --CS-SLLKSPDYSLSIFRNSEERNPFVLNALIRG------LTENARFESSVRHFILMLR 119
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
G+ PD LTFPF+LK +K +G +++ +K V D FV+ S++ ++ G +
Sbjct: 120 LGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKH 179
Query: 191 ARMLFDEMSNR----DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
A +F+E +R ++ WN +I GY R+ D+ +A LFR M +RN SW+++I G+V
Sbjct: 180 AFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVD 239
Query: 247 GGRAREALELFQEMQSSSV---------------------------EEMVKPDKITIASV 279
G A +LF+ M +V E+ +KP++ TIA+V
Sbjct: 240 SGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAV 299
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
LSAC+ GA+ G +HGY+ +G+ D IGTALVDMY KCG ++ A VF M KD
Sbjct: 300 LSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI 359
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
L+WTAMI +A++G +A FR+M G +P+ V F+ +L+AC +S V+ G F
Sbjct: 360 LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDS 419
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
MR Y +EP + HY ++D+L RAG +EA L+ +MP+ PD+ W AL C+ H
Sbjct: 420 MRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYR 479
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
E V+Q L++LDP Y+ L +A G DV+K R +++R I++ G S +E+
Sbjct: 480 RAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKR-IKERSLGWSYIEL 538
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
DG +++FS + +E+ L L+ + + G+
Sbjct: 539 DGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGY 574
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 285/522 (54%), Gaps = 44/522 (8%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS-VSGSLSYATNVFSHIKR 93
+ C N+ E K++H + IK + +L CA S S++YA ++F I
Sbjct: 38 LKRCNNIDEFKQVHARFIKL--SLFCSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDD 95
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
+ + MIR N+ L Y +M+ GI PD T+P LLK CT+
Sbjct: 96 PCTFDFKTMIRGY------VNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAI 149
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G ++G V K G+ DVFVQNS+I++ Y
Sbjct: 150 REGKQIHGHVFKLGLEADVFVQNSLINM-------------------------------Y 178
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
R G+++++ +F +++ ++ SW+S+ + V G E L LF+EM E +K ++
Sbjct: 179 GRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFREM---CRETNLKAEE 235
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
+ S LSACA GA++ G +HG+L R+ + ++++ T+LVDMY KCGC++ A +F++
Sbjct: 236 SGMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQK 295
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M K++ L ++AMIS FAL+G G+ A F EM EG+ P+HV +V LL+AC+HSGLV++G
Sbjct: 296 MEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEG 355
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R F M VEP HY C++D+L RAGL EA I+S+P+E + VW + L C+
Sbjct: 356 RRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCR 415
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
+H N+ELG+ AQ L+ L N Y+ + +MY++A +DDV ++R + +G+ K+ PG
Sbjct: 416 VHQNIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDDVARSRTEIAIKGL-KQTPG 474
Query: 514 CSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
S+V+V G H F + +E+ +L+ + +K G+
Sbjct: 475 FSTVKVKGKTHRFVSQDRSHPQCKEIYKMLHQMEWQLKFEGY 516
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 232/412 (56%), Gaps = 28/412 (6%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DVF +V+S + G + AR +FD M R+ VSWNAM+ Y++ +D A +LF M
Sbjct: 129 DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP 188
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM----------------QSSSVEEMVK---- 270
RN+ SWN+++TG+ Q G EA +F M Q EE ++
Sbjct: 189 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE 248
Query: 271 -------PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
++ A VLS CA + A++ G +HG L R+G +G AL+ MY KCG
Sbjct: 249 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGN 308
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
+E A F+EM ++D ++W MI+ +A +G+GKEA + F M +P+ +T VG+L+A
Sbjct: 309 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 368
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+HSGLVEKG F M H + V HY CMID+L RAG +EA L++ MP EPD
Sbjct: 369 CSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST 428
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
+WGALLG ++H N ELG A+ + +L+P N YV L ++YA +G++ D +K R +M+
Sbjct: 429 MWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMME 488
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
ERG++K VPG S +EV VH FS KE++ L L MK G+
Sbjct: 489 ERGVKK-VPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGY 539
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 30/294 (10%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DV N+++S ++ G ++ AR LFD M RDVVSWN M+ GY R GD+ A LF
Sbjct: 67 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAP 126
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG--A 288
R++F+W ++++G+ Q G EA +F M P++ ++ AY+
Sbjct: 127 VRDVFTWTAVVSGYAQNGMLEEARRVFDAM----------PERNAVSWNAMVAAYIQRRM 176
Query: 289 IDHGKWVHGYLRRSGLDC-DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMIS 347
+D K + + C +V ++ Y + G +E A VF MP+KD ++W AM++
Sbjct: 177 MDEAKELFNM-----MPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLA 231
Query: 348 VFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
++ G +E F EM G N F +LS CA +E G M H L+
Sbjct: 232 AYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECG-----MQLHGRLIR 286
Query: 408 PHVYHYAC-----MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
Y C ++ + + G +A M E DV W ++ G HG
Sbjct: 287 AG-YGVGCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVVSWNTMIAGYARHG 338
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 161/365 (44%), Gaps = 59/365 (16%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M E KE+ + PC ++++T + +G L A VF + + D ++
Sbjct: 177 MDEAKELFNMM---PCRNVASWNTMLT------GYAQAGMLEEAKAVFDTMPQKDAVSWA 227
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
M+ A + S + L+L+ +M G + F +L C G ++
Sbjct: 228 AMLAAY------SQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLH 281
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G++++ G FV N++++++ CG + AR F+EM RDVVSWN MI GY R
Sbjct: 282 GRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARH---- 337
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
G +EALE+F M+++S KPD IT+ VL
Sbjct: 338 ---------------------------GFGKEALEIFDMMRTTS----TKPDDITLVGVL 366
Query: 281 SACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKD 338
+AC++ G ++ G + + G+ T ++D+ G+ G + A+ + K+MP + D
Sbjct: 367 AACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 426
Query: 339 TLAWTAMISVFALN---GYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+ W A++ ++ G+ A + E+E E N +V L + A SG R
Sbjct: 427 STMWGALLGASRIHRNPELGRSAAEKIFELEPE----NAGMYVLLSNIYASSGKWRDARK 482
Query: 396 CFVMM 400
VMM
Sbjct: 483 MRVMM 487
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 31/262 (11%)
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M RD V++N MI + G + +A F +++ SWN ++ +V+ GR EA LF
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+ D I+ +++S G + + + + R G DVV +V
Sbjct: 61 N--------SRTEWDVISWNALMSGYVQWGKMSEAREL--FDRMPGR--DVVSWNIMVSG 108
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y + G + A +F P +D WTA++S +A NG +EA F M N V++
Sbjct: 109 YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSW 164
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEP--HVYHYACMIDILSRAGLFSEAERLIRS 435
+++A ++++ + F MM P +V + M+ ++AG+ EA+ + +
Sbjct: 165 NAMVAAYIQRRMMDEAKELFNMM-------PCRNVASWNTMLTGYAQAGMLEEAKAVFDT 217
Query: 436 MPMEPDVFVWGALL-----GGC 452
MP + D W A+L GGC
Sbjct: 218 MP-QKDAVSWAAMLAAYSQGGC 238
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 247/441 (56%), Gaps = 49/441 (11%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SG L A VF I + D+ ++N MI A D K L L++QM P+
Sbjct: 187 SGDLVVAQRVFDEIPQKDVISWNSMISGYA----RAGDME--KALSLFQQM------PE- 233
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+ N++IS ++ G + SAR FD
Sbjct: 234 --------------------------------RNFASWNAMISGYVEFGDIDSARSFFDA 261
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M R+ VSW MI GY + GD+D A +LF ++ +++ +N++I + Q R +EAL+LF
Sbjct: 262 MPQRNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLF 321
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
M + V V+PD++T+ASV+SAC+ LG + G W+ Y+RR G++ D + TAL+D+
Sbjct: 322 NNMLNPDVN--VQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDL 379
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG +++AY +F + KKD +A+TAMI +NG +A F EM + PN +TF
Sbjct: 380 YAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITF 439
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+GLL+A H+GLVE+G CF M+ LV P V HY M+D+ RAG EA LI+SMP
Sbjct: 440 IGLLTAYNHAGLVEEGYHCFTSMKKYNLV-PSVDHYGIMVDLFGRAGRLQEALELIKSMP 498
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
M+P VWGALL C++H NVE GE AQ+ +L+P + L ++YA R+DDVK+
Sbjct: 499 MQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYCSLLSNIYASGERWDDVKR 558
Query: 498 TRNLMKERGIRKEVPGCSSVE 518
R + KE+G K +PGCS +E
Sbjct: 559 LRKVTKEKGFSK-IPGCSWME 578
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 225/467 (48%), Gaps = 40/467 (8%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDH-HSLITRLLFFCALSVSGSLS-YATNVFSHIKRSDLY 97
++++ K++H I+ + H ++ R + A + S +++ Y +V H K D +
Sbjct: 16 SVKQAKQVHALIL----IHGLSHLEPILARQILLSASNYSATVAQYVHSVLHHSKSPDSF 71
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
++ IR + T + LY QM G+ P LK C + + G
Sbjct: 72 SWACAIRFS------TQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGL 125
Query: 158 SVYGQVVKFGVC---DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
S++GQV KFG D ++V+ +++ + G + AR +FDEM+ R+VVSWN+M+ GYL
Sbjct: 126 SIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 185
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+SGDL VA +F + ++++ SWNS+I+G+ + G +AL LFQ+M +
Sbjct: 186 KSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNFA-------- 237
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDC----DVVIGTALVDMYGKCGCVERAYGV 330
+ +++S G ID RS D + V ++ Y KCG V+ A +
Sbjct: 238 SWNAMISGYVEFGDIDSA--------RSFFDAMPQRNNVSWMTMISGYSKCGDVDSACEL 289
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM--EAEGVRPNHVTFVGLLSACAHSG 388
F ++ KD L + AMI+ +A N KEA F M V+P+ +T ++SAC+ G
Sbjct: 290 FDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLG 349
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+ G W MR + +E + ++D+ ++ G +A L + + D+ + A+
Sbjct: 350 DLRFGPWIESYMRRLG-IEMDGHLATALLDLYAKCGSIDKAYELFHGL-RKKDLVAYTAM 407
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPL-NHAFYVNLCDMYAKAGRFDD 494
+ GC ++G K+ ++D N ++ L Y AG ++
Sbjct: 408 ILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEE 454
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 227/358 (63%), Gaps = 5/358 (1%)
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M + +VS AMI Y + G +D A LF +++R+ WN +I G+ Q G E L LF
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
++M ++ V +P+++T+ +VLSAC GA++ G+WVH Y+ +G+ +V +GT+L+DM
Sbjct: 61 RQMLNAKV----RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDM 116
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG +E A VF+ + KD +AW +M+ +A++G+ ++A F+EM G +P +TF
Sbjct: 117 YSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITF 176
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+G+L+AC+H+GLV +G F M+ Y +EP V HY CM+++L RAG EA L+++M
Sbjct: 177 IGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNME 236
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
++ D +WG LLG C++HGN+ LGE++A+YL+ + N YV L ++YA AG ++ V +
Sbjct: 237 IDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVAR 296
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R LMKE G KE PGCSS+EV+ VHEF E+ +L ++ +K G+
Sbjct: 297 VRTLMKESGFEKE-PGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGY 353
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 43/292 (14%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
SL++ + G + A +F ++ D +N+MI A + N+ L
Sbjct: 5 SLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYA-QHGLPNEG-----LL 58
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
L++QML + P+ +T +L C + G V+ + G+ +V V S+I ++
Sbjct: 59 LFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYS 118
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
CG + AR++F+ +SN+DVV+WN+M++GY + G
Sbjct: 119 KCGSLEDARLVFERISNKDVVAWNSMVVGY--------------------------AMHG 152
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVHGYLRRS 302
F Q +AL LF+EM + P IT VL+AC++ G + G K+ +
Sbjct: 153 FSQ-----DALRLFKEMCMIGYQ----PTDITFIGVLNACSHAGLVSEGWKFFYSMKDEY 203
Query: 303 GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG 353
G++ V +V++ G+ G +E AY + K M +D + W ++ L+G
Sbjct: 204 GIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHG 255
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S GSL A VF I D+ +N M+ A S L+L+K+M G P
Sbjct: 118 SKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHG------FSQDALRLFKEMCMIGYQP 171
Query: 136 DCLTFPFLLKECTKRLDGLVGAS---VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+TF +L C+ GLV Y ++G+ V +++L G++ A
Sbjct: 172 TDITFIGVLNACSHA--GLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAY 229
Query: 193 MLFDEMS-NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
L M ++D V W ++ G++ + + + +N+
Sbjct: 230 ELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNL 272
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 187/538 (34%), Positives = 282/538 (52%), Gaps = 62/538 (11%)
Query: 27 TKLILRNAIDECKNMREL---KEIHTQIIKSPCLQTNDHHS------LITRLLFFCALSV 77
+++ N + C ++ L K+IH QI++S +HHS +T++ C
Sbjct: 245 SRITYMNVLSACGSLAALEKGKQIHAQIVES------EHHSDVRVSTALTKMYIKC---- 294
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G++ A VF + D+ +N MI S + + H ++ +ML ++PD
Sbjct: 295 -GAVKDAREVFECLPNRDVIAWNTMI-GGLVDSGQLEEAHG-----MFHRMLKECVAPDR 347
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T+ +L C R GL ACG AR + D
Sbjct: 348 VTYLAILSACA-RPGGL-----------------------------ACGKEIHARAVKDG 377
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ + DV NA+I Y ++G + A +F RM KR++ SW +++ G+ G+ E+ F
Sbjct: 378 LVS-DVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTF 436
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
++M +++ V+ +KIT VL AC+ A+ GK +H + ++G+ D+ + AL+ M
Sbjct: 437 KKM----LQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSM 492
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG VE A V + M +D + W +I A NG G EA F M++E +RPN TF
Sbjct: 493 YFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTF 552
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V ++SAC LVE+GR F MR Y + P HYACM+DIL+RAG EAE +I +MP
Sbjct: 553 VNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMP 612
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+P +WGALL C+ HGNVE+GE+ A+ + L+P N YV+L +YA AG + DV K
Sbjct: 613 FKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAK 672
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R LMKERG++KE PG S +EV G VH F EE+ L L+K +K+ G+
Sbjct: 673 LRKLMKERGVKKE-PGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGY 729
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 189/410 (46%), Gaps = 69/410 (16%)
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
G D + LL+ C K D VG V+ +++FG+ +V++ N+++ L++ CG V A
Sbjct: 39 GSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEA 98
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R L F + +++ SWN +I+G+ G +
Sbjct: 99 RRL-------------------------------FDKFSNKSVVSWNVMISGYAHRGLGQ 127
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EA LF MQ +E ++PDK T S+LSAC+ A++ G+ VH + +GL + +G
Sbjct: 128 EAFNLFTLMQ----QEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVG 183
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
AL+ MY KCG V A VF M +D ++WT + +A +GY +E+ T+ M EGVR
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVR 243
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMM----------------------------RHV 403
P+ +T++ +LSAC +EKG+ + R V
Sbjct: 244 PSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303
Query: 404 YLVEPH--VYHYACMIDILSRAGLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNV 458
+ P+ V + MI L +G EA + M E PD + A+L C G +
Sbjct: 304 FECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGL 363
Query: 459 ELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRNLMKERGI 507
G+++ + ++ + N L +MY+KAG D ++ + M +R +
Sbjct: 364 ACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDV 413
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 181/376 (48%), Gaps = 49/376 (13%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG---KCLKLYKQMLCTGISP 135
GS++ A +F + ++N+MI A H G + L+ M G+ P
Sbjct: 93 GSVNEARRLFDKFSNKSVVSWNVMISGYA---------HRGLGQEAFNLFTLMQQEGLEP 143
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D TF +L C+ G V+ +V++ G+ ++ V N++IS++ CG V AR +F
Sbjct: 144 DKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVF 203
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D M++RD VSW + Y S G A+E+L+
Sbjct: 204 DAMASRDEVSWTTLTGAYAES-------------------------------GYAQESLK 232
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
+ M ++E V+P +IT +VLSAC L A++ GK +H + S DV + TAL
Sbjct: 233 TYHAM----LQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALT 288
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
MY KCG V+ A VF+ +P +D +AW MI +G +EA F M E V P+ V
Sbjct: 289 KMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRV 348
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
T++ +LSACA G + G+ LV + A +I++ S+AG +A ++
Sbjct: 349 TYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNA-LINMYSKAGSMKDARQVFDR 407
Query: 436 MPMEPDVFVWGALLGG 451
MP + DV W AL+GG
Sbjct: 408 MP-KRDVVSWTALVGG 422
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 269/494 (54%), Gaps = 44/494 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS+ YA VF ++ +Y +N + RA T H + L LY +M G+ D
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRA------LTLAGHGEEVLGLYWKMNRIGVESDRF 179
Query: 139 TFPFLLKECTKR---LDGLV-GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
T+ ++LK C ++ L+ G ++ + + G V++ +++ +
Sbjct: 180 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM------------- 226
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
Y R G +D A +F M RN+ SW+++I + + G+A EAL
Sbjct: 227 ------------------YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEAL 268
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
F+EM + + P+ +T+ SVL ACA L A++ GK +HGY+ R GLD + + +AL
Sbjct: 269 RTFREMMRETKDS--SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 326
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
V MYG+CG +E VF M +D ++W ++IS + ++GYGK+A F EM A G P
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 386
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
VTFV +L AC+H GLVE+G+ F M + ++P + HYACM+D+L RA EA ++++
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
M EP VWG+LLG C++HGNVEL E+ ++ L L+P N YV L D+YA+A +D+
Sbjct: 447 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
VK+ + L++ RG++K +PG +EV ++ F + E++ L L++ MK G
Sbjct: 507 VKRVKKLLEHRGLQK-LPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKG 565
Query: 555 FGQYIRGLSMEAQV 568
+ +G+ E +
Sbjct: 566 YIPQTKGVLYELET 579
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 157/353 (44%), Gaps = 50/353 (14%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
LK ++L SP T+ L+ C R V+ ++ G D F+ +I +
Sbjct: 62 LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ G V AR +FD+ R + WNA LFR
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNA----------------LFR-------------- 151
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC-AYLGAIDH---GKWVHG 297
G E L L+ +M VE D+ T VL AC A ++H GK +H
Sbjct: 152 -ALTLAGHGEEVLGLYWKMNRIGVES----DRFTYTYVLKACVASECTVNHLMKGKEIHA 206
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
+L R G V I T LVDMY + GCV+ A VF MP ++ ++W+AMI+ +A NG E
Sbjct: 207 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 266
Query: 358 AFDTFREM--EAEGVRPNHVTFVGLLSACAHSGLVEKGRWC--FVMMRHVYLVEPHVYHY 413
A TFREM E + PN VT V +L ACA +E+G+ +++ R + + P +
Sbjct: 267 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI--- 323
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
+ ++ + R G +R+ M + DV W +L+ +HG G+K Q
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVHG---YGKKAIQ 372
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 16/221 (7%)
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
S N +I + G+ ++A+ + + S P + T ++ C + ++
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESS--------PSQQTYELLILCCGHRSSLSDALR 98
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
VH ++ +G D D + T L+ MY G V+ A VF + K+ W A+ L G+
Sbjct: 99 VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS----GLVEKGRWCFV-MMRHVYLVEPH 409
G+E + +M GV + T+ +L AC S + KG+ + R Y H
Sbjct: 159 GEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY--SSH 216
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
VY ++D+ +R G A + MP+ +V W A++
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIA 256
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 191/462 (41%), Gaps = 102/462 (22%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
KEIH + + + H ++T L+ A G + YA+ VF + ++ +++ MI
Sbjct: 202 KEIHAHLTRR---GYSSHVYIMTTLVDMYARF--GCVDYASYVFGGMPVRNVVSWSAMI- 255
Query: 105 ANACKSSETNDTHSGKCLKLYKQML--CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
AC + + + + L+ +++M+ SP+ +T +L+ C G ++G
Sbjct: 256 --ACYA---KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
+++ G+ + V +++++++ CG + + +FD M +RDVVSWN
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN--------------- 355
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
S+I+ + G ++A+++F+EM ++ P +T SVL A
Sbjct: 356 ----------------SLISSYGVHGYGKKAIQIFEEMLANGAS----PTPVTFVSVLGA 395
Query: 283 CAYLGAIDHGKWVHGYL-RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
C++ G ++ GK + + R G+ + +VD+ G+ ++
Sbjct: 396 CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLD---------------- 439
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
EA ++M E P + LL +C G VE R
Sbjct: 440 ---------------EAAKMVQDMRTE---PGPKVWGSLLGSCRIHGNVELAERA---SR 478
Query: 402 HVYLVEP-HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
++ +EP + +Y + DI + A ++ E +R+ + + L G C M E+
Sbjct: 479 RLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRG----LQKLPGRCWM----EV 530
Query: 461 GEKVAQYLIDLDPLN------HAFYVNLCDMYAKAGRFDDVK 496
K+ + + +D N HAF V L + + G K
Sbjct: 531 RRKMYSF-VSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTK 571
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 288/563 (51%), Gaps = 75/563 (13%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L+ +D + LK+IH ++ SP T ++RLL C + + YA +
Sbjct: 4 LKTLLDLPLHFLHLKQIHCLLLTSPIFYTR-RDLFLSRLLRRCCTAAT-QFRYARRLLCQ 61
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
++ + ++ +I + N S Y+ M G+ P TFP LLK K
Sbjct: 62 LQTLSIQLWDSLI-GHFSGGITLNRRLS---FLAYRHMRRNGVIPSRHTFPPLLKAVFKL 117
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
D + +VKFG+ D FV+NS+IS + + G A LFD ++DVV+W AMI
Sbjct: 118 RDS-NPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMI 176
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG--------------------FVQGGRA 250
G++R+G A+ F MKK + + + +++ GR
Sbjct: 177 DGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRV 236
Query: 251 R--------------------EALELFQEMQSSSV-----------------------EE 267
+ +A ++F EM S +V EE
Sbjct: 237 KCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEE 296
Query: 268 MVK----PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
M+K P++ T++SVLSACA++GA+ G+ VH Y+ ++ ++ + GT L+D+Y KCGC
Sbjct: 297 MLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
+E A VF+ + +K+ WTAMI+ FA +GY ++AFD F M + V PN VTF+ +LSA
Sbjct: 357 LEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSA 416
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
CAH GLVE+GR F+ M+ + +EP HYACM+D+ R GL EA+ LI MPMEP
Sbjct: 417 CAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNV 476
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
VWGAL G C +H + ELG+ A +I L P + Y L ++Y+++ +D+V + R MK
Sbjct: 477 VWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMK 536
Query: 504 ERGIRKEVPGCSSVEVDGVVHEF 526
++ + K PG S +EV G + EF
Sbjct: 537 DQQVVKS-PGFSWIEVKGKLCEF 558
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/608 (30%), Positives = 306/608 (50%), Gaps = 88/608 (14%)
Query: 28 KLILRNAIDE-CKNMRELKEIHTQIIKSPCLQTND------------HH-------SLIT 67
K +LR ++D C E +TQ++ C++TN+ HH L
Sbjct: 4 KSMLRQSVDLLCSRSTATSEAYTQLVLE-CVRTNEINQAKRLQSHMEHHLFQPTDSFLHN 62
Query: 68 RLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSS---------------- 111
+LL A G L A N+F + + D++++N ++ A A S
Sbjct: 63 QLLHLYA--KFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDS 120
Query: 112 -ETNDTHSG--------KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
N T +G + L+L+K+M G P T +L + D G ++G
Sbjct: 121 VSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGS 180
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGD---- 218
++ +VF+ N++ ++ CG + AR LFD ++ +++VSWN MI GY ++G
Sbjct: 181 IIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240
Query: 219 -------------------------------LDVALDLFRRMKKRNIFSWNSIITGFVQG 247
+D A +F K+++I W +++ G+ +
Sbjct: 241 IGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKN 300
Query: 248 GRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCD 307
GR +AL LF EM + E ++PD T++SV+S+CA L ++ HG+ VHG +GL+ +
Sbjct: 301 GREEDALLLFNEM----LLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNN 356
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEA 367
+++ +AL+DMY KCG ++ A VF MP ++ ++W AMI A NG+ K+A + F M
Sbjct: 357 LLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ 416
Query: 368 EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFS 427
+ +P++VTF+G+LSAC H +E+G+ F + + + + P + HYACM+++L R G
Sbjct: 417 QKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIE 476
Query: 428 EAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
+A LI++M +PD +W LL C G++ E A++L +LDP Y+ L +MYA
Sbjct: 477 QAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYA 536
Query: 488 KAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLS 547
GR+ DV RNLMK + ++K G S +E+D VH F+ + E++ LN L
Sbjct: 537 SMGRWKDVASVRNLMKSKNVKK-FAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLI 595
Query: 548 KIMKNGGF 555
++ GF
Sbjct: 596 GKLQEEGF 603
>gi|147772239|emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
Length = 901
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 289/543 (53%), Gaps = 45/543 (8%)
Query: 15 SPAKVSPPNKESTKLILRNA----IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL 70
S A+ +E K+ N+ + C+NMR+L +I +I S + S + ++
Sbjct: 355 SAARSRARKQERRKISRSNSCLALLKTCRNMRQLSQIQAYLIISGLFRKPFVASKVLKVS 414
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
A ++Y +F I D N +I+A + S + + L Y + L
Sbjct: 415 ADYA-----DVNYTILIFRSIDSPDTVCVNAVIKAYSISSV------AHQALVFYFETLR 463
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
G + TFP L C K G +GQ +K GV + + VQNS++ ++ CG V
Sbjct: 464 NGFMCNSFTFPPLFSCCRKXGCVEYGEKFHGQAIKNGVDNVLDVQNSMVHMYGCCGVVEX 523
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
A +F EMS RD+VSWN++I Y + G L +A LF M +RN SWN ++ G+++GG
Sbjct: 524 AEKVFGEMSKRDLVSWNSIIDAYAKLGHLVLAHRLFDAMPERNAVSWNIMMGGYLKGGNP 583
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
AL+LF+EM ++ ++ + T+ SVL+AC + G+ +HG L R+ L +++
Sbjct: 584 GCALKLFREMANAG----LRGGETTMVSVLTACCRSARLKEGRSIHGVLIRTFLKSSLIL 639
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM----- 365
TAL+DMY KC V+ A V+ M K + + W AMI ++G ++ F EM
Sbjct: 640 DTALIDMYSKCERVDVARVVYDRMTKXNLVCWNAMILGHCIHGNAEDGLKLFEEMVDGIR 699
Query: 366 ---------------EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
E +G+ P+ +TF+G+L ACA GL+ +GR + M + + ++P+
Sbjct: 700 SEDGEINLDKGIKRIEGQGLJPDEITFIGVLCACAREGLLAEGRSYYSQMINTFHIKPNF 759
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVF-----VWGALLGGCQMHGNVELGEKVA 465
HY CM ++ + GL EAE ++RSMP E + W LL C+ G V LGE++A
Sbjct: 760 AHYWCMANLFAGVGLVQEAEEILRSMPEEDEDLSWESSFWAGLLSSCRFQGXVFLGERIA 819
Query: 466 QYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHE 525
YLI+ +P N ++Y L ++YA AGR++DV + + ++KERGI K++PGC+ ++ +VHE
Sbjct: 820 TYLIESEPQNISYYRLLLNVYAVAGRWEDVARVKEMVKERGI-KQMPGCNLADLKEIVHE 878
Query: 526 FSM 528
F +
Sbjct: 879 FKL 881
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 287/529 (54%), Gaps = 32/529 (6%)
Query: 11 SLLNSPAKVSPPNKESTKLIL---RNA--IDECKNMRELKEIHTQIIKSPCLQTNDHHSL 65
++L SP+ P+ +L R A + C + R E+H +++ Q
Sbjct: 8 AVLPSPSSTRHPSGGVQHGVLTADRAAALLAGCASARRASELHAAAVRAGVDQDKAVDFR 67
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
+ R A + SG L A + Y I A++ + H L
Sbjct: 68 LQR-----AYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRG-----LHHAALALLS 117
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMA 184
+ +L G+ P T L C GL VG +++G VK + + +V +++ ++
Sbjct: 118 EMLLSHGLLPTAHTLSASLPAC----GGLAVGRALHGYAVKLALSGEPYVATALLGMYAR 173
Query: 185 CGFVTSARMLFDEMS-NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
G +AR+LFD M + VVS AM+ Y + G LD A LF + +++ WN+++ G
Sbjct: 174 AGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDG 233
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
+ Q GR EAL LF+ M S VE PD++++ LSA A LG + G+W+H ++ S
Sbjct: 234 YTQHGRPSEALRLFRRMLRSGVE----PDEVSVVLALSAVAQLGTAESGRWLHSFVTNSS 289
Query: 304 ---LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK--KDTLAWTAMISVFALNGYGKEA 358
+ + +GTAL+DMY KCG +E A VF ++ +D +AW AM++ +A++G+ +EA
Sbjct: 290 SRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREA 349
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F ++ A+G+ P +TF+G+L+AC+HSGLV++GR F M Y +EP V HY CM+D
Sbjct: 350 LAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVD 409
Query: 419 ILSRAGLFSEAERLIRSMP-MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
+L RAG EA L++SM +PD +W +LL C++H N+ELG+++A +L+ N
Sbjct: 410 LLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHKNMELGQRIADHLVANGLANSG 469
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YV L +MYA AG + +V + R +M+ GI+KE PGCS+VEV V EF
Sbjct: 470 TYVLLSNMYAAAGNWREVGRVRAMMRASGIQKE-PGCSAVEVGRRVVEF 517
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/453 (35%), Positives = 256/453 (56%), Gaps = 25/453 (5%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP--- 135
G L YA VF + R D +YN MI KC + + P
Sbjct: 170 GCLGYARQVFDRMPRRDSVSYNSMIDGYV------------KCGMIESARGLFDLMPKEK 217
Query: 136 -DCLTFPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
+ +++ F++ +R DG+ V ++ ++ + D+ NS+I ++ G + A+
Sbjct: 218 KNLISWNFMISGYAQRADGVNVAKKLFDEMPE----KDLISWNSLIDGYVKHGRMEDAKS 273
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LF++M RDVV+W M+ GY + G + A LF RM R++ ++NS+ITG+VQ +EA
Sbjct: 274 LFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMPLRDVVAYNSMITGYVQNRYHKEA 333
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
+ +F +M+ E + PD+ T+ VLSA A LG + +H Y+ + +G A
Sbjct: 334 IGIFNDMEK---ESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVA 390
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
L+D Y KCG ++++ VF+E+ K W AMI A++G G+ AFD ++E ++P+
Sbjct: 391 LIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPD 450
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
+TF+G+L+AC+HSGLV++G CF +MR + +EP + HY CM+DILSR+G A+ LI
Sbjct: 451 DITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLI 510
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
MP+EP+ +W L C H E GE VA++L N + +V L +MYA G +
Sbjct: 511 EEMPIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYASFGMWK 570
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+V++ R MKER +RK +PGCS +E+DG VHEF
Sbjct: 571 EVRRVRTTMKERKLRK-IPGCSWIELDGNVHEF 602
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 221/446 (49%), Gaps = 37/446 (8%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS-YATNVFSHIKRSDL 96
CKN ++ +IH ++I + ++ + L TR++ A S L+ +A VF
Sbjct: 24 CKNSEDVNKIHARLITNGFIKNPN---LTTRIVLDFADSRRSYLAEFARFVFHEYHVCSN 80
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV- 155
+ NA S ++ K L L+ ML TG+S D + +LK C++ G V
Sbjct: 81 GDFEDPFLWNAVIKSHSHGLDPRKALLLFCLMLETGVSVDKFSLSLVLKACSRL--GFVK 138
Query: 156 -GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G ++G + K G+ D+++QN +I L++ CG + AR +FD M RD VS+N+MI GY+
Sbjct: 139 EGMQIHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYV 198
Query: 215 RSGDLDVALDLFRRM--KKRNIFSWNSIITGFVQGGRARE-ALELFQEMQSSSVEEMVKP 271
+ G ++ A LF M +K+N+ SWN +I+G+ Q A +LF +EM +
Sbjct: 199 KCGMIESARGLFDLMPKEKKNLISWNFMISGYAQRADGVNVAKKLF--------DEMPEK 250
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
D I+ S++ G ++ K + + + DVV +VD Y K G V +A +F
Sbjct: 251 DLISWNSLIDGYVKHGRMEDAKSLFNKMPKR----DVVTWATMVDGYAKLGFVHQAKSLF 306
Query: 332 KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLV 390
MP +D +A+ +MI+ + N Y KEA F +ME E + P+ T V +LSA A G +
Sbjct: 307 DRMPLRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRL 366
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYA----CMIDILSRAGLFSEAERLIRSMPMEPDVFVWG 446
K + H+Y+++ +ID S+ G ++ R+ + + W
Sbjct: 367 SKA-----VDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIE-NKSIDHWN 420
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLD 472
A++GG +HG LGE L+ ++
Sbjct: 421 AMIGGLAIHG---LGESAFDMLLQIE 443
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 25/276 (9%)
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
F WN++I G R+AL LF M +E V DK +++ VL AC+ LG + G
Sbjct: 87 FLWNAVIKSHSHGLDPRKALLLFCLM----LETGVSVDKFSLSLVLKACSRLGFVKEGMQ 142
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
+HG+LR++G+ D+ + L+ +Y KCGC+ A VF MP++D++++ +MI + G
Sbjct: 143 IHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGM 202
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAH-SGLVEKGRWCFVMMRHVYLVEPHVYHY 413
+ A F M E + N +++ ++S A + V + F M E + +
Sbjct: 203 IESARGLFDLMPKE--KKNLISWNFMISGYAQRADGVNVAKKLFDEMP-----EKDLISW 255
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP 473
+ID + G +A+ L MP + DV W ++ G G V A+ L D P
Sbjct: 256 NSLIDGYVKHGRMEDAKSLFNKMP-KRDVVTWATMVDGYAKLGFVH----QAKSLFDRMP 310
Query: 474 LNHAFYVN------LCDMYAKA--GRFDDVKKTRNL 501
L N + + Y K G F+D++K +L
Sbjct: 311 LRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHL 346
>gi|413937828|gb|AFW72379.1| hypothetical protein ZEAMMB73_412000 [Zea mays]
Length = 471
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/433 (36%), Positives = 252/433 (58%), Gaps = 8/433 (1%)
Query: 122 LKLYKQMLCTG-ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF--VQNSV 178
L L+ +ML G SP+ +P +L+ +D + S++ K G C + ++ S+
Sbjct: 43 LALFLRMLRHGRPSPNQFVYPLVLRAACA-VDVRIVRSIHSHACKSGFCGYEYDVIRTSL 101
Query: 179 ISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWN 238
+ + + AR LFD ++ R VVSW A++ GY R+G + A+ LF RM +R++ +WN
Sbjct: 102 LDCYSRHAMMADARKLFDGLTERSVVSWTALVSGYARAGKIGDAIMLFERMTERDVAAWN 161
Query: 239 SIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY 298
+IITG Q EA+ +F M + + +P+ TI+ VLSAC +LG + GK +H
Sbjct: 162 AIITGCSQNRLFAEAVGIFGRMVGTGL----RPNATTISCVLSACGHLGMLKIGKLIHCC 217
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
R+ + + L+DMYGKCG +E A +F E+ + AW ++I+ AL+G+ K A
Sbjct: 218 AWRTCVGFGSSVLNGLIDMYGKCGNLEGATWIFYEVSDRSLTAWNSLINCLALHGHSKCA 277
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F EM EGV P+ +TFVGLL+AC H G V++G F +M+H + +EP + HY C+I+
Sbjct: 278 ISVFNEMRGEGVEPDVITFVGLLNACTHGGFVDEGIKYFELMQHEHGIEPEIEHYGCIIN 337
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAF 478
+L RAG F +A +I +M +E D +WG+LL C++H NVEL E + L++LDP N +
Sbjct: 338 LLGRAGRFQDALNVISNMRIESDEVIWGSLLNACRVHRNVELAELAIRKLLELDPNNANY 397
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEE 538
V L ++Y++ G +++V+K R M+E I K++PGCS +EVD +H F E
Sbjct: 398 VVMLANVYSEGGLWEEVRKARKFMEEENIGKKLPGCSWIEVDRKIHRFYSGDDAHSESEN 457
Query: 539 LVLILNGLSKIMK 551
+ L L+ M+
Sbjct: 458 IYDTLEDLAASME 470
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 280/517 (54%), Gaps = 53/517 (10%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A +F + D+ ++N MI S ++ + + L +YKQM+ GI D T +
Sbjct: 204 AFELFDKLCDRDVISWNSMI------SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISV 257
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
L C +G +V+ +K + N+++ ++ CG + A +F++M R+V
Sbjct: 258 LVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKR------------------------------- 232
VSW +MI GY R G D A+ L ++M+K
Sbjct: 318 VSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 377
Query: 233 --------NIFSWNSIITGFVQGGRAREALELFQEMQSSSV---EEMV---KPDKITIAS 278
N+F N+++ + + G A +F M + M+ KPD T+A
Sbjct: 378 IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMAC 437
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
VL ACA L A++ GK +HGY+ R+G D + ALVD+Y KCG + A +F +P KD
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
++WT MI+ + ++GYG EA TF EM G+ P+ V+F+ +L AC+HSGL+E+G F
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 557
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+M++ + +EP + HYACM+D+LSR G S+A + ++P+ PD +WGALL GC+ + ++
Sbjct: 558 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDI 617
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
EL EKVA+ + +L+P N +YV L ++YA+A ++++VK+ R + ++G+RK PGCS +E
Sbjct: 618 ELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKN-PGCSWIE 676
Query: 519 VDGVVHEF-SMKGSPKVVKEELVLILNGLSKIMKNGG 554
+ G V+ F S S + + +L + + MK G
Sbjct: 677 IKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEG 713
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 183/401 (45%), Gaps = 49/401 (12%)
Query: 129 LCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFV 188
+C + T+ +L+ C G V+ + V D + ++S + CG +
Sbjct: 91 MCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDL 150
Query: 189 TSARMLFDEMSNRDVVSWNAMIIGYLRSGDL--------------------DVALDLFRR 228
R +FD M ++V WN M+ Y + GD + A +LF +
Sbjct: 151 KEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDK 210
Query: 229 MKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGA 288
+ R++ SWNS+I+G+V G L ++++M ++ D TI SVL CA G
Sbjct: 211 LCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID----VDLATIISVLVGCANSGT 266
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
+ GK VH +S + + L+DMY KCG ++ A VF++M +++ ++WT+MI+
Sbjct: 267 LSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAG 326
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL--- 405
+ +G A ++ME EGV+ + V +L ACA SG ++ G+ H Y+
Sbjct: 327 YTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV-----HDYIKAN 381
Query: 406 -VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG-------------- 450
+E +++ ++D+ ++ G A + +M ++ D+ W ++G
Sbjct: 382 NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK-DIISWNTMIGELKPDSRTMACVLP 440
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAG 490
C +E G+++ Y++ + N L D+Y K G
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIK----RSDLYTYNIMIRANA-CKSSET-NDTHSG 119
IT +L CA S GSL +V +IK S+L+ N ++ A C S E N S
Sbjct: 355 ITSILHACARS--GSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFST 412
Query: 120 KCLK--LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS 177
+K + + + PD T +L C G ++G +++ G D V N+
Sbjct: 413 MVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANA 472
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
++ L++ CG + AR+LFD + ++D+VSW MI GY
Sbjct: 473 LVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGY------------------------ 508
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
G EA+ F EM+ + +E PD+++ S+L AC++ G ++ G W
Sbjct: 509 -------GMHGYGNEAIATFNEMRDAGIE----PDEVSFISILYACSHSGLLEQG-WRFF 556
Query: 298 YLRRSGLDCDVVIG--TALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
Y+ ++ + + + +VD+ + G + +AY + +P D W A++
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALL 608
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 117/325 (36%), Gaps = 87/325 (26%)
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+ V +NA I+ + + GDL+ A+EL
Sbjct: 63 DHQVTDYNAKILHFCQLGDLE-------------------------------NAMELICM 91
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
Q S +E T SVL CA L + GK VH ++ + + D +G LV Y
Sbjct: 92 CQKSELETK------TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYA 145
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR---EMEAEGVRPNH-- 374
CG ++ VF M KK+ W M+S +A G KE+ F+ E EG RP
Sbjct: 146 TCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAF 205
Query: 375 -----------VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRA 423
+++ ++S +GL E+G + M +
Sbjct: 206 ELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY--------------------- 244
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-L 482
+ ++ D+ ++L GC G + LG+ V I + N L
Sbjct: 245 ------------LGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTL 292
Query: 483 CDMYAKAGRFDDVKKTRNLMKERGI 507
DMY+K G D + M ER +
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGERNV 317
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/367 (43%), Positives = 223/367 (60%), Gaps = 11/367 (2%)
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDE--MSNRDVVSWNAMIIGYLRSGDLDVA 222
K G V N ++ L+ A G + AR +FD + DVVSWN M+ GY + GDL+ A
Sbjct: 109 KCGALAHPVVTNCLLKLYCALGMLPDARRVFDTSGATALDVVSWNTMVSGYGKCGDLEAA 168
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
++F RM +R + SW+++I V+ G EAL +F +M + KPD + + SVL
Sbjct: 169 REVFVRMPERGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGF----KPDAVVLVSVLKT 224
Query: 283 CAYLGAIDHGKWVHGYL---RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
CA+LGA++ G+WVH +L R G +V++ TALVDMY KCGC+ A+ VF + D
Sbjct: 225 CAHLGALERGRWVHRFLKAERLGGRPGNVMLETALVDMYCKCGCMNEAWWVFDGVQSHDV 284
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
+ W AMI A+NG+GK A + FR M +G PN TFV L AC H+G V++G F
Sbjct: 285 VLWNAMIGGLAMNGHGKRALELFRRMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFRS 344
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
MR + +EP HY C+ D+L RAGL EAE ++ MPMEP WGAL+ C MH NV
Sbjct: 345 MRD-HGIEPRREHYGCLADLLGRAGLLEEAEGVLLDMPMEPHASQWGALMSSCLMHNNVG 403
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
+GE+V + LI+L+P + YV L ++YA G ++D K R +M+ERG +KE G S +E
Sbjct: 404 VGERVGKKLIELEPDDGGRYVALFNLYAVNGLWEDAKALRKMMEERGAKKET-GLSFIEW 462
Query: 520 DGVVHEF 526
+G+VHEF
Sbjct: 463 NGLVHEF 469
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 146/335 (43%), Gaps = 64/335 (19%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANAC-KSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G L A VF + L +++ MI +AC ++ E ++ L+++ QM G PD
Sbjct: 163 GDLEAAREVFVRMPERGLVSWSAMI--DACVRTGEFSEA-----LRVFDQMTGNGFKPDA 215
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVV-KF-------GVCDDVFVQNSVISLFMACGFVT 189
+ +LK C +GA G+ V +F G +V ++ +++ ++ CG +
Sbjct: 216 VVLVSVLKTCAH-----LGALERGRWVHRFLKAERLGGRPGNVMLETALVDMYCKCGCMN 270
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
A +FD + + DVV WNAMI G +G AL+LFRRM + GFV
Sbjct: 271 EAWWVFDGVQSHDVVLWNAMIGGLAMNGHGKRALELFRRMLDK----------GFV---- 316
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
P++ T L AC + G +D G+ V +R G++
Sbjct: 317 ---------------------PNESTFVVALCACIHTGRVDEGEDVFRSMRDHGIEPRRE 355
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLA-WTAMISVFALN---GYGKEAFDTFREM 365
L D+ G+ G +E A GV +MP + + W A++S ++ G G+ E+
Sbjct: 356 HYGCLADLLGRAGLLEEAEGVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIEL 415
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
E + + +V L + A +GL E + MM
Sbjct: 416 EPD----DGGRYVALFNLYAVNGLWEDAKALRKMM 446
>gi|108709982|gb|ABF97777.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 523
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/518 (33%), Positives = 272/518 (52%), Gaps = 20/518 (3%)
Query: 12 LLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF 71
LL S A +S L L + +C +M L+++H ++KS + +R +
Sbjct: 21 LLPSSASISAFLASHPALTLLH--TQCASMAHLRQLHAALVKSGLARDP---IAASRAVA 75
Query: 72 FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
FCA +YA + H R + + +N IRA A + G + L+ ML +
Sbjct: 76 FCA-GDGRDAAYAARLVRHHPRPNAFMWNTAIRALA------DGPGPGAAVALFVDMLGS 128
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
P+ TFP L + GA ++G VVK G+ D +V+NSVI+++ + G A
Sbjct: 129 PTPPERRTFPSLFAAYARLGRAGDGAGLHGMVVKLGLGGDAYVRNSVIAMYASRGAADEA 188
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
L D V+ N+ I+ R+G +D A +F M R + +W+++++ + + R
Sbjct: 189 IALLARCEAFDAVACNSAIVALARAGRVDEARAVFDGMPARTVATWSAMVSAYSRDSRCH 248
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
+A+ELF MQ+ VE P+ + SVL CA LGA++ G WVH Y+ + + + ++
Sbjct: 249 DAVELFSAMQAEGVE----PNANVLVSVLGCCASLGALEQGAWVHAYIDKHDVAMNALVV 304
Query: 312 TALVDMYGKCGCVERAYGVF---KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
TALVDMY KCG + +A VF + + +W +M+ A++G +EA F E+
Sbjct: 305 TALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWNSMMLGHAVHGQWREAAALFSELRPH 364
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
G+RP++VTF+ +L A HSG+ ++ + M + V P V HY C++D L+RAG E
Sbjct: 365 GLRPDNVTFIAILMAYGHSGMADEAKAVLASMASEHGVVPGVEHYGCLVDALARAGRLRE 424
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
AE I +MP+ PD VWGALL GC++HG+ E + A+ + DP + YV A+
Sbjct: 425 AEGAIAAMPVAPDAAVWGALLSGCRLHGDAEAAARAAREAVRCDPRDSGAYVLAASALAR 484
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
G R M+E G+ K VPGCS +EVDGVVHEF
Sbjct: 485 GGEARRGAAVRGRMREEGVGK-VPGCSMIEVDGVVHEF 521
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 295/567 (52%), Gaps = 79/567 (13%)
Query: 14 NSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFC 73
S AK + P + + + CK +L ++H +I+ Q + L+T+ F
Sbjct: 15 TSFAKTTNPKSNVSLYSISALLKLCKTHIDLHQVHAHLIQKGLEQDS---FLVTQ--FIS 69
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGI 133
A + +SY+T+VF + + +N ++ + C + D + LY +M
Sbjct: 70 ASNSVAHISYSTSVFDRVLSPSTFLWNSLV-SGYCAKLQFVDI-----ISLYVRMKREDG 123
Query: 134 SPDCLTFPFLLKECT--------------------------------------------K 149
+PD TFP LLK C K
Sbjct: 124 APDRYTFPSLLKVCASEGKMMEGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARK 183
Query: 150 RLDGL------------VGASVYGQVVKFGVCDDVFVQ------NSVISLFMACGFVTSA 191
DG+ VG S G +V+ D+ + N++I +M G V SA
Sbjct: 184 VFDGMSERNVVSWTAMIVGYSSIGNLVEAKRLFDLMPERNVASWNAIIGGYMKMGDVKSA 243
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
FDEM ++VVS+ MI GY ++GD+ A +LF++ +R+I +W+++I+G+ Q G+
Sbjct: 244 EKAFDEMPEKNVVSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPN 303
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDC-DVVI 310
EA++ F EM S +V KPDK + S++ AC+ LG +D KWV Y R +D +
Sbjct: 304 EAVKTFLEMSSRNV----KPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHV 359
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
AL+DM KCG +ERA +F++MPK+D +++ +++ +++G+G +A F M E +
Sbjct: 360 TAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDL 419
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
P+ V F +L+AC+ +GLV++G F MMR Y + P V HYAC++D+LSR+G EA
Sbjct: 420 TPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAY 479
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
LI+S+P++ WGALLG C+++ + EL E VA LI+++P N YV L ++YA A
Sbjct: 480 ELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVASRLIEIEPENAGNYVLLSNIYAAAD 539
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSV 517
R+ DV RN M ERG+RK +PGCS +
Sbjct: 540 RWLDVSAVRNQMNERGLRK-IPGCSWI 565
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 275/514 (53%), Gaps = 47/514 (9%)
Query: 54 SPCLQTNDHHSLITRLLFFCA------LSVSGSLSYATNVFSHIK--RSDLYTYNIMIRA 105
SP H L+ R L A ++ S S YA +F + +++Y + + +
Sbjct: 20 SPAAARQLHAQLLLRGLPLPARAAVTLIASSSSPQYARAIFDSVPAASANVYLWTATVSS 79
Query: 106 NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVK 165
A +S + + L+ ML +G P+ T +LK +K V+G +VK
Sbjct: 80 YAKHASPA---LAAEAFPLFMFMLRSGPRPNGFTVSSVLKSLSKLRAAHQVCQVHGFLVK 136
Query: 166 FGVCD-------------------------------DVFVQNSVISLFMACGFVTSARML 194
G+ +V V N+++S ++ G V +AR +
Sbjct: 137 AGLASSLHVGATLLDSYGNLCRVKDARRVFDEMPRSNVVVGNAMVSGYVKAGDVEAARQV 196
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD M RD +SWN ++ GYLR GD +A DLF M +RN+ SWN +I+ + G +++
Sbjct: 197 FDGMVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQRNVNSWNMMISACSEVGLWADSV 256
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
+F +M+ S +PD T+A ++SACA LG + + V+G LR+ ++ + + +L
Sbjct: 257 AVFNQMRFMSF----RPDAATMAVLMSACAQLGFLSVARQVYGLLRKGCVEMNCHVHNSL 312
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
VDM+ KCGC A+ +F EM KD +++ M+S A +G+GK+A F +M G++P+
Sbjct: 313 VDMFAKCGCFSEAHLLFAEMDPKDVVSYNVMVSALAHHGHGKDALKLFEQMIEGGLQPDA 372
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
VTF+G+LSACAH+GLV+ G++ F M Y +E HYACM+D+ R GL EA ++
Sbjct: 373 VTFLGVLSACAHAGLVDSGKYYFETMGTTYAIEKSADHYACMVDLYGRVGLIEEAHYFVK 432
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
MP++P +WGALL C+ H N+++GE A+ LI ++P+N YV L + A + ++D
Sbjct: 433 IMPVKPHAGIWGALLNACRKHCNIDVGEVAARELIRIEPMNPGNYVLLSNTLAWSQQWDA 492
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM 528
V R LM+ GI K G S VEV+ VVHEF M
Sbjct: 493 VGDVRQLMRGNGIDKNT-GFSWVEVESVVHEFLM 525
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/513 (34%), Positives = 278/513 (54%), Gaps = 18/513 (3%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY-NIMI 103
K+IH QI+KS Q + + C L L A +F + + D ++ +I+
Sbjct: 22 KKIHAQIVKSGLNQCQPLPNTLLDAYGKCNL-----LQDAHYLFDEMPQRDHVSWASILT 76
Query: 104 RANACKSSETNDTHSGKCLKLYKQMLCTG-ISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
N K K L ++ M T + PD + LLK C +G V+ +
Sbjct: 77 AYNQAKLP-------NKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHAR 129
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
V DD V++S++ ++ CG + AR +FD + + VSW AM+ GY RSG D A
Sbjct: 130 FVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEA 189
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
++LF R RN++SW ++I+G VQ G + +F EM+ V+ + D + ++SV+ A
Sbjct: 190 MELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIV---DPLVLSSVVGA 246
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
CA L + GK +HG + SG + + I ALVDMY KC + A VF M +D ++W
Sbjct: 247 CANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSW 306
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
T++I A +G KEA D + +M ++PN VTFVGL+ AC+H+GLV KGR F M
Sbjct: 307 TSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIE 366
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
Y + P + + C +D+LSR+G +EAE LI++MP +PD W ALL C+ HGN E+G
Sbjct: 367 DYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGV 426
Query: 463 KVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGV 522
++A L+ L+ + YV L ++YA AG+++ + + R LM + ++++ PG SS+++
Sbjct: 427 RIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRK-PGYSSIDLGKE 485
Query: 523 VHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
F + +K+E+ +L L M+ G+
Sbjct: 486 SQVFHAGETCHPMKDEIFGLLKELDAEMRKRGY 518
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 158/382 (41%), Gaps = 75/382 (19%)
Query: 144 LKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDV 203
LK CTK L ++ Q+VK G+ + N+++ + C + A LFDEM RD
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68
Query: 204 VSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSS 263
VSW SI+T + Q + L +F M ++
Sbjct: 69 VSW-------------------------------ASILTAYNQAKLPNKTLSIFHYMFTT 97
Query: 264 SVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
+ ++PD A++L ACA L ++ GK VH S D V+ ++LVDMY KCG
Sbjct: 98 ---DRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGL 154
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
A VF + K +++WTAM+S +A +G EA + F N ++ L+S
Sbjct: 155 PSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVR----NLYSWTALISG 210
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
SG G + F+ MR +DI+ D
Sbjct: 211 LVQSGYCIDGCYMFIEMRRE------------GVDIV--------------------DPL 238
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRNLM 502
V +++G C + LG+++ +I + F N L DMYAK D+ RN+
Sbjct: 239 VLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCS---DILAARNVF 295
Query: 503 KERGIRKEVPGCSSVEVDGVVH 524
R + ++V +S+ V H
Sbjct: 296 N-RMLHRDVVSWTSIIVGAAQH 316
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 260/450 (57%), Gaps = 19/450 (4%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G L +A VF + + D +YN MI C E+ +L+ M +
Sbjct: 172 GCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIES-------ARELFDLMPSE--KKNL 222
Query: 138 LTFPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
+++ ++ +R DG+ + ++++ ++ + D+ NS+I ++ G + A+ LFD
Sbjct: 223 ISWNSMINGYAQRADGVDIASNLFDEMPE----KDLISWNSLIDGYVKHGRIEDAKDLFD 278
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
+M RDVV+W M+ GY + G + A LF +M +R++ ++NS++ G+VQ EA+++
Sbjct: 279 KMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNSMMAGYVQNRYHMEAIDI 338
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F +M+ E + PD+ T+ VLSA A LG + +H Y +G AL+D
Sbjct: 339 FNDMEK---ESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYTVEKKFLLGGKLGVALID 395
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG +++A GVF+ + K W AMI A++G G+ AFD ++E ++P+ +T
Sbjct: 396 MYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDIT 455
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
FVG+L+AC+HSGLV++G CF +M+ + +EP + HY CM+DILSR+G A+ LI M
Sbjct: 456 FVGVLNACSHSGLVKEGLLCFELMKRKHKIEPRLQHYGCMVDILSRSGRIELAKNLIEEM 515
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
P+EP+ +W L C H E GE VA++LI N + YV L +MYA G + +V+
Sbjct: 516 PIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASLGMWKEVR 575
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ R +MKER I+K +PGCS +E+DG VHEF
Sbjct: 576 RVRTMMKERKIQK-IPGCSWIELDGSVHEF 604
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 224/447 (50%), Gaps = 37/447 (8%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS-YATNVFSHIKRSDL 96
CK ++ +IH + + ++ + L TR++ A S L+ +A VF S
Sbjct: 24 CKTSEDVSKIHARKGTTGFIKNTN---LTTRIVLAFAASRRSYLAEFARCVFHEYHVSSX 80
Query: 97 YTYNIM--IRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ N+ NA S ++ K L L+ ML G+S D + +LK C++ G
Sbjct: 81 XSGNVEDPFLWNAVIKSHSHGVEPRKALLLFFLMLKNGVSVDKFSLSLVLKACSRL--GF 138
Query: 155 V--GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
V G +G + K G+ D+F+QN +I L++ CG + AR +FD MS RD VS+N+MI G
Sbjct: 139 VKEGMQXHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDG 198
Query: 213 YLRSGDLDVALDLFRRM--KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVK 270
Y++ G ++ A +LF M +K+N+ SWNS+I G+ Q RA ++ S+ +EM +
Sbjct: 199 YVKCGLIESARELFDLMPSEKKNLISWNSMINGYAQ--RADGV-----DIASNLFDEMPE 251
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
D I+ S++ G I+ K + + R DVV +VD Y K G V +A +
Sbjct: 252 KDLISWNSLIDGYVKHGRIEDAKDLFDKMPRR----DVVTWATMVDGYAKLGFVHQAKSL 307
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGL 389
F +MP++D +A+ +M++ + N Y EA D F +ME E + P+ T V +LSA A G
Sbjct: 308 FDQMPQRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGR 367
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYA----CMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
+ K M H+Y VE +ID+ S+ G +A + + + W
Sbjct: 368 LSKA-----MDMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIE-NKSIDHW 421
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLD 472
A++GG +HG LGE L+ ++
Sbjct: 422 NAMIGGLAIHG---LGESAFDMLLQIE 445
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 174/482 (36%), Positives = 266/482 (55%), Gaps = 33/482 (6%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP--DCL 138
L A +F + D+ ++N MI A + D K +L+ + SP D
Sbjct: 217 LGDARQLFDRMPVRDVISWNTMISGYA----QVGDLSQAK--RLFNE------SPIRDVF 264
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM----- 193
T+ T + G V + + K+ D++ V+N + M G+V +M
Sbjct: 265 TW-------TAMVSGYVQNGMVDEARKY--FDEMPVKNEISYNAMLAGYVQYKKMVIAGE 315
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LF+ M R++ SWN MI GY ++G + A LF M +R+ SW +II+G+ Q G EA
Sbjct: 316 LFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEA 375
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
L +F EM+ + ++ T + LS CA + A++ GK VHG + ++G + +G A
Sbjct: 376 LNMFVEMK----RDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNA 431
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
L+ MY KCG + A VF+ + +KD ++W MI+ +A +G+G++A F M+ GV+P+
Sbjct: 432 LLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPD 491
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
+T VG+LSAC+HSGL+++G F M Y V+P HY CMID+L RAG EAE L+
Sbjct: 492 EITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLM 551
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
R+MP +P WGALLG ++HGN ELGEK A+ + ++P N YV L ++YA +GR+
Sbjct: 552 RNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWV 611
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNG 553
DV K R+ M+E G++K V G S VEV +H FS+ K+ + L L M+
Sbjct: 612 DVGKMRSKMREAGVQK-VTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRRE 670
Query: 554 GF 555
G+
Sbjct: 671 GY 672
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 154/341 (45%), Gaps = 64/341 (18%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D+ N IS M G SA +F+ M R VS+NAMI GYLR+ +A DLF +M
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM----------------QSSSVEE------- 267
+R++FSWN ++TG+V+ R EA +LF M Q+ V+E
Sbjct: 105 ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNK 164
Query: 268 MVKPDKITIASVLSACAYLGAIDHGK--------W--------VHGYLRRSGLD------ 305
M + I+ +L+A + G + + W + GY++R+ L
Sbjct: 165 MPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLF 224
Query: 306 -----CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
DV+ ++ Y + G + +A +F E P +D WTAM+S + NG EA
Sbjct: 225 DRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARK 284
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP--HVYHYACMID 418
F EM + N +++ +L +G V+ + V+ ++ P ++ + MI
Sbjct: 285 YFDEMPVK----NEISYNAML-----AGYVQYKK--MVIAGELFEAMPCRNISSWNTMIT 333
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ G ++A +L MP + D W A++ G +G+ E
Sbjct: 334 GYGQNGGIAQARKLFDMMP-QRDCVSWAAIISGYAQNGHYE 373
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 153/349 (43%), Gaps = 61/349 (17%)
Query: 55 PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETN 114
PC + +++IT +G ++ A +F + + D ++ +I S
Sbjct: 321 PCRNISSWNTMIT------GYGQNGGIAQARKLFDMMPQRDCVSWAAII------SGYAQ 368
Query: 115 DTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFV 174
+ H + L ++ +M G S + TF L C +G V+GQVVK G FV
Sbjct: 369 NGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFV 428
Query: 175 QNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI 234
N+++ ++ CG A +F+ + +DVVSWN MI GY R G
Sbjct: 429 GNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHG----------------- 471
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-K 293
R+AL LF+ M+ + VKPD+IT+ VLSAC++ G ID G +
Sbjct: 472 --------------FGRQALVLFESMKKAG----VKPDEITMVGVLSACSHSGLIDRGTE 513
Query: 294 WVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALN 352
+ + R + T ++D+ G+ G +E A + + MP +W A++ ++
Sbjct: 514 YFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIH 573
Query: 353 G---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
G G++A + +ME + N +V L + A S GRW V
Sbjct: 574 GNTELGEKAAEMVFKMEPQ----NSGMYVLLSNLYAAS-----GRWVDV 613
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 41/232 (17%)
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
D D+V + + + G + A VF MP++ ++++ AMIS + N A D F +
Sbjct: 43 DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDK 102
Query: 365 MEAEGV---------------------------RPNHVTFVGLLSACAHSGLVEKGRWCF 397
M + + + V++ +LS A +G V++ R F
Sbjct: 103 MPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVF 162
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
M H + + ++ G EA RL S ++ W L+GG + N
Sbjct: 163 NKMPHRNSIS-----WNGLLAAYVHNGRLKEARRLFESQS-NWELISWNCLMGG-YVKRN 215
Query: 458 VELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRNLMKERGIR 508
+ LG+ A+ L D P+ N + YA+ G D+ + + L E IR
Sbjct: 216 M-LGD--ARQLFDRMPVRDVISWNTMISGYAQVG---DLSQAKRLFNESPIR 261
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 181/547 (33%), Positives = 279/547 (51%), Gaps = 82/547 (14%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G +S A +F D++ +N ++R C S G +++Y +M +SPD
Sbjct: 121 GEVSCARKLFDKFPDPDVFLWNAIVR---CYSRHG---FFGHAIEMYARMQVACVSPDGF 174
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQN---------------------- 176
+FP +LK C+ +G V+GQ+ + G DVFVQN
Sbjct: 175 SFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRL 234
Query: 177 ---------SVISLFMACGFVTSARMLFDEMSNRDV-VSWNAMI---------------- 210
S+IS + G A +F EM +V W A++
Sbjct: 235 VDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGK 294
Query: 211 --------IG--------------YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGG 248
+G Y + G + VA F +++ ++ WN++I+G+V+ G
Sbjct: 295 SIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNG 354
Query: 249 RAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDV 308
A EA+ELF+ M+S ++ +PD IT+ S ++ACA +G+++ +W+ Y+ S DV
Sbjct: 355 YAEEAIELFRLMKSKNI----RPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDV 410
Query: 309 VIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE 368
++ T+L+D Y KCG V+ A VF +P KD + W+AM+ + L+G G+E+ F M
Sbjct: 411 IVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQA 470
Query: 369 GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSE 428
GV PN VTFVGLL+AC +SGLVE+G F MR Y +EP HYAC++D+L RAG
Sbjct: 471 GVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGHLDR 529
Query: 429 AERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAK 488
A + +MP+EP V VWGALL C++H +V LGE A+ L LDP N YV L ++YA
Sbjct: 530 AYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYAS 589
Query: 489 AGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
+ +D V K R LM+E+G+ K + G S +E++G + F +E+ + L +
Sbjct: 590 SCLWDCVAKVRVLMREKGLTKHL-GYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLER 648
Query: 549 IMKNGGF 555
+K GF
Sbjct: 649 RLKEAGF 655
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/345 (44%), Positives = 215/345 (62%), Gaps = 5/345 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D N++IS ++ CG + A +LF +M N+D+VSWN MI GY G + A+ +FR+M
Sbjct: 352 DAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMN 411
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+RN SWNS+I+GFVQ G EAL+ F M+ + + D T A LSACA L A+
Sbjct: 412 QRNTVSWNSVISGFVQNGLCVEALQHFVLMR----RDAKRADWSTYACCLSACADLAALH 467
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G+ H L RSG D G AL+ Y KCG + A VF EMP D ++W A+I +A
Sbjct: 468 VGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYA 527
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
NG+G EA FREME VRP+ VTFVG+LSAC+H+GL+++G F M Y + P
Sbjct: 528 SNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVA 587
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HYACM+D+L R+G SEA +I+ M ++P+ VWGA+LG C++H N EL + A+ L +
Sbjct: 588 EHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYE 647
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
L+P + YV L ++ A+AG++D+ + R +KERG+ K PG +
Sbjct: 648 LEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHK-TPGLA 691
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 204/490 (41%), Gaps = 111/490 (22%)
Query: 72 FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA--NACKSSETND------THSGKCLK 123
AL+ G ++ A +F I R + ++N MI A + + ++ D G
Sbjct: 49 LSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSWT 108
Query: 124 L----YKQMLCTGISPDCLT-FPFLLKECTKRLDGLV-GASVYGQ------VVKFGVCDD 171
L Y + G++ D L P +CT + ++ G + +G+ +++ D
Sbjct: 109 LMVSCYARAGELGLARDALDRMPG--DKCTACYNAMISGYAKHGRFDDAVALLREMPAPD 166
Query: 172 VFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
+ NSV+ G + A FDEM RD+VSWN M+ GY+R+GD+D A LF +
Sbjct: 167 IISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPS 226
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSV----------------EEMVK----- 270
N+ SW +++ G+ + GR EA ELF + +V EE K
Sbjct: 227 PNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEM 286
Query: 271 PDK--ITIASVLSACAYLGAIDHGK----------------WVHGYLRRSGLDC------ 306
PDK I+ +++SA G + K +HGYL+ +D
Sbjct: 287 PDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFD 346
Query: 307 -----DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
D V ++ Y CG ++ A +F++MP KD ++W MI+ +A +G ++A
Sbjct: 347 GLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGI 406
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH-----------------VY 404
FR+M + N V++ ++S +GL + FV+MR
Sbjct: 407 FRKMN----QRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACAD 462
Query: 405 LVEPHV-----------------YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
L HV + +I ++ G EA ++ MP PD+ W A
Sbjct: 463 LAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMP-APDIVSWNA 521
Query: 448 LLGGCQMHGN 457
L+ G +G+
Sbjct: 522 LIDGYASNGH 531
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 137/325 (42%), Gaps = 24/325 (7%)
Query: 172 VFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
V+ N ++ G + +AR LFD M +R+ VS+NAM+ R G + A LF + +
Sbjct: 11 VYRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPR 70
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
RN SWN++I GR +A +LF M P + + L Y A +
Sbjct: 71 RNTVSWNAMIAACSDHGRVADARDLFDAM----------PARDGFSWTLMVSCYARAGEL 120
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
G R G C A++ Y K G + A + +EMP D ++W +++
Sbjct: 121 GLARDALDRMPGDKCTACY-NAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTR 179
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
NG A F EM A + V++ +L +G V+ F + P+V
Sbjct: 180 NGEMVRAVKFFDEMPAR----DMVSWNLMLEGYVRAGDVDSAAGLFAG-----VPSPNVV 230
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDL 471
+ +++ RAG EA L +P + +V W +L G ++E K+ + D
Sbjct: 231 SWVTLLNGYCRAGRIGEARELFDRIP-DRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDK 289
Query: 472 DPLNHAFYVNLCDMYAKAGRFDDVK 496
+ ++ + + + G+ + K
Sbjct: 290 NSIS---WTTMISALVRGGKLQEAK 311
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 140/363 (38%), Gaps = 94/363 (25%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQ---MLCTGISP 135
G + A +F + + + ++N +I + +G C++ + M
Sbjct: 398 GQMRKAVGIFRKMNQRNTVSWNSVI---------SGFVQNGLCVEALQHFVLMRRDAKRA 448
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D T+ L C VG + + + G D F N++IS + CG + AR +F
Sbjct: 449 DWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVF 508
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
DEM D+VSWNA+I GY +G EA+
Sbjct: 509 DEMPAPDIVSWNALIDGYASNG-------------------------------HGTEAIS 537
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
+F+EM+ + V+PD++T VLSAC++ G ID G
Sbjct: 538 VFREMEDND----VRPDEVTFVGVLSACSHAGLIDEG----------------------- 570
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLA-----WTAMISVFALNGYGKEAFDTFREMEAEGV 370
+ F M K L + M+ + +G EAF+ + M+ V
Sbjct: 571 ------------FDFFNSMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQ---V 615
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH-VYHYACMIDILSRAGLFSEA 429
+PN + +L AC E + + +Y +EPH +Y + +I + AG + EA
Sbjct: 616 QPNAGVWGAMLGACRVHKNHELAQ---LAAEKLYELEPHKTSNYVLLSNITAEAGKWDEA 672
Query: 430 ERL 432
+ +
Sbjct: 673 QNM 675
>gi|357126462|ref|XP_003564906.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 582
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 260/520 (50%), Gaps = 77/520 (14%)
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
D + +N +IR +A S L + M + PD TFP +LK C G+
Sbjct: 77 DAFPWNTLIRLHAPASPRN-------ALAYFACMRRAAVEPDAYTFPAVLKACAC---GV 126
Query: 155 VGASVYGQVVKFGVCDDVFVQN------------------------------SVISLFMA 184
+G V+ + V+ G+ D+F +N S+++ ++A
Sbjct: 127 LGLPVHAEAVRTGMDGDLFTRNALVSFYCRIGDCRSGRKVFDHGARDLVSWNSMVAGYVA 186
Query: 185 CG--------------------------------FVTSARMLFDEMSNRDVVSWNAMIIG 212
CG V AR LFDE NRD+V W +MI G
Sbjct: 187 CGELELAQELFDGMPLRDAFSWATMIDAYGKRSGGVDRARELFDETPNRDLVCWCSMIDG 246
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y R G +D A LF M +RN+ SW+ ++ G+V+ G EALELFQ M + KPD
Sbjct: 247 YARQGRMDEARALFEEMPERNVISWSIVVDGYVRCGEPSEALELFQRMLRCGI----KPD 302
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
++ +ACA LGA++ G+W+H YL + + DVV+ TAL+DMY KCG ++ +F+
Sbjct: 303 RVAAVGAFTACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYMKCGRLDLGKLIFE 362
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
MP K + W MI + G A F +MEAEG + ++ + +L+AC H+GL+ +
Sbjct: 363 SMPDKSVVTWNVMIIGLGTHSCGLHAVKLFYQMEAEGAPIDDLSVLAVLTACTHAGLISE 422
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G F MR + ++P V HY ++D+L RAG A I +MPMEP +WG+LL C
Sbjct: 423 GLGIFHRMRKDFGMDPKVEHYGALVDLLGRAGHLDHARHAIETMPMEPTPELWGSLLAAC 482
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
+ H VEL E + L L + YV L ++YA G +D V + R LM G++K++
Sbjct: 483 RSHRCVELAELSVERLASLGADDFGVYVLLSNIYADEGMWDGVFRIRRLMSAEGMKKDI- 541
Query: 513 GCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
G S +EVDG HEF GS K+E+ L+L LS ++ +
Sbjct: 542 GRSVIEVDGQTHEFVNGGSSHSCKDEVHLMLQNLSNMVAS 581
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 192/588 (32%), Positives = 290/588 (49%), Gaps = 86/588 (14%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHI-KRSDLY 97
K ++ K H ++++ ND S+I R ++ S + Y VF S+ +
Sbjct: 15 KCLKHAKLAHCRLLRLNLHHDNDLLSIILR----STINFSNNAQYPILVFHKTPTNSNTF 70
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
YN MIR K N H LY M I PD TF F+LK C + +G
Sbjct: 71 LYNTMIRGMVSKDRFNNAVH------LYASMHKAAIVPDSFTFSFVLKACARLNLFHLGV 124
Query: 158 SVYGQVVKFG-----------VC---------------DDVFVQNSVISLFMACGFVTSA 191
++ V K G VC DD+ V+N V M CG +
Sbjct: 125 MIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFG 184
Query: 192 RM-----LFDEMS---------------------------------------NRDVVSWN 207
+ LF + +R+V
Sbjct: 185 KFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVAT 244
Query: 208 AMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
+++ Y + G ++ A +F M +++I W+++I G+ G REA+ELF EM+ +V
Sbjct: 245 SLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNV-- 302
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
+PD + LS+CA LGA++ G W G + + V+GT+L+D Y KCG +E A
Sbjct: 303 --RPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEA 360
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
GV+K M +KD + + A+IS A+ G AF F +M G+ PN TFVGLL C H+
Sbjct: 361 LGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHA 420
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
GLV+ GR F M H + V P + HY CM+D+L+RAG EA LI+ MPM+ +V VWG+
Sbjct: 421 GLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGS 480
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
LLGGC++H +L E V + LI+L+P N YV L ++Y+ + R+D+ +K R+ + E+G+
Sbjct: 481 LLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGM 540
Query: 508 RKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+K +PG S VEVDGVVHEF + + + +++ L L K +K G+
Sbjct: 541 QK-LPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGY 587
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 235/411 (57%), Gaps = 36/411 (8%)
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
K +D G V+ ++ G VFVQN+++ ++ ACG SA
Sbjct: 7 KLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAH---------------- 50
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
LF M +RN+ +WNS+I G+ GR EAL LF+EM VE
Sbjct: 51 ---------------KLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVE-- 93
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
PD T+ S+LSACA LGA+ G+ H Y+ + GLD ++ G AL+D+Y KCG + +A+
Sbjct: 94 --PDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 151
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF EM +K ++WT++I A+NG+GKEA + F+E+E +G+ P+ +TFVG+L AC+H G
Sbjct: 152 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCG 211
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+V++G F M+ Y + P + HY CM+D+L RAGL +A I++MPM+P+ VW L
Sbjct: 212 MVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTL 271
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
LG C +HG++ LGE L+ L+P + YV L ++YA R+ DV K R M G++
Sbjct: 272 LGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVK 331
Query: 509 KEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYI 559
K PG S VE+ +HEF M EE+ + L ++K++K G+ +I
Sbjct: 332 K-TPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHI 381
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 147/330 (44%), Gaps = 56/330 (16%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLI-TRLLFFCALSVSGSLSYATNVFS 89
++ AI + ++RE +++H+ I+ N SL+ + + G A +F
Sbjct: 1 MQRAIAKLMDVREGEKVHSIAIR------NGFESLVFVQNTLVHMYAACGHAESAHKLFE 54
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
+ +L T+N +I A + + L L+++M G+ PD T LL C +
Sbjct: 55 LMAERNLVTWNSVINGYAL------NGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAE 108
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+G + +VK G+ ++ N+++ L+ CG + A +FDEM + VVSW ++
Sbjct: 109 LGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSL 168
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I+G + GF +EALELF+E++ +
Sbjct: 169 IVGL--------------------------AVNGF-----GKEALELFKELERKG----L 193
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA----LVDMYGKCGCVE 325
P +IT VL AC++ G +D G Y +R + +V +VD+ G+ G V+
Sbjct: 194 MPSEITFVGVLYACSHCGMVDEG---FDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVK 250
Query: 326 RAYGVFKEMP-KKDTLAWTAMISVFALNGY 354
+A+ + MP + + + W ++ ++G+
Sbjct: 251 QAHEFIQNMPMQPNAVVWRTLLGACTIHGH 280
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
A A L + G+ VH R+G + V + LV MY CG E A+ +F+ M +++ +
Sbjct: 4 AIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVT 63
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
W ++I+ +ALNG EA FREM GV P+ T V LLSACA G + GR V M
Sbjct: 64 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV 123
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
V L + +++ ++D+ ++ G +A ++ M E V W +L+ G ++G
Sbjct: 124 KVGL-DGNLHAGNALLDLYAKCGSIRQAHKVFDEM-EEKSVVSWTSLIVGLAVNG 176
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/477 (35%), Positives = 265/477 (55%), Gaps = 46/477 (9%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A VF ++ +Y +N + RA A + ND L+LY +M G+S D T+ +L
Sbjct: 123 ARKVFDKTRKRTIYVWNALFRALAL-AGRGNDV-----LELYPRMNMMGVSSDRFTYTYL 176
Query: 144 LKECTKRLDGLV-----GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
LK C + LV G ++ +++ G V V +++ ++ G V+ A +FDEM
Sbjct: 177 LKACVAS-ECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEM 235
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
++VVSW+AMI Y ++G + EALELF+
Sbjct: 236 PVKNVVSWSAMIACYAKNG-------------------------------KPYEALELFR 264
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM ++ + + P+ +T+ SVL ACA A++ GK +H Y+ R GLD + + +AL+ MY
Sbjct: 265 EMMLNTHDSV--PNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMY 322
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
+CG +E +F M KKD + W ++IS + L+GYG++A F EM G P+H++F+
Sbjct: 323 ARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFI 382
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+L AC+H+GLVE+G+ F M + ++P V HYACM+D+L RA EA ++I + +
Sbjct: 383 SVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRI 442
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EP VWG+LLG C++H +VEL E+ ++ L L+P N YV L D+YA+A +D+VK+
Sbjct: 443 EPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRV 502
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ L+ R ++K VPG S +EV ++ F+ E+L +L LS MK G+
Sbjct: 503 KKLLDSRELQK-VPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGY 558
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 164/331 (49%), Gaps = 20/331 (6%)
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
++L D ++D +I + +D A +F + +KR I+ WN++ GR
Sbjct: 93 QLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGN 152
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACA----YLGAIDHGKWVHGYLRRSGLDCD 307
+ LEL+ M V D+ T +L AC + + GK +H ++ R G
Sbjct: 153 DVLELYPRMNMMGVSS----DRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAH 208
Query: 308 VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM-- 365
V + T L+DMY + GCV A VF EMP K+ ++W+AMI+ +A NG EA + FREM
Sbjct: 209 VHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMML 268
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRW--CFVMMRHVYLVEPHVYHYACMIDILSRA 423
PN VT V +L ACA +E+G+ +++ R + + P + + +I + +R
Sbjct: 269 NTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVI---SALITMYARC 325
Query: 424 GLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID--LDPLNHAFYVN 481
G E+ +LI + DV +W +L+ +HG K+ + +ID P +H +++
Sbjct: 326 GKL-ESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSP-SHISFIS 383
Query: 482 LCDMYAKAGRFDDVKKT-RNLMKERGIRKEV 511
+ + G ++ KK +++KE GI+ V
Sbjct: 384 VLGACSHTGLVEEGKKLFESMVKEHGIQPSV 414
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 16/218 (7%)
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N +I + G ++AL L + P + T ++ + A ++ VH
Sbjct: 42 NHLIQSLCKQGNLKQALYLLSHESN--------PTQQTCELLILSAARRNSLSDALDVHQ 93
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
L G D D + T L++M+ + V+ A VF + K+ W A+ AL G G +
Sbjct: 94 LLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGND 153
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHS----GLVEKGRWCFV-MMRHVYLVEPHVYH 412
+ + M GV + T+ LL AC S ++KG+ ++RH Y HV+
Sbjct: 154 VLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGY--GAHVHV 211
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
++D+ +R G S A + MP++ +V W A++
Sbjct: 212 MTTLMDMYARFGCVSYASAVFDEMPVK-NVVSWSAMIA 248
>gi|357473845|ref|XP_003607207.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508262|gb|AES89404.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 185/520 (35%), Positives = 272/520 (52%), Gaps = 65/520 (12%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH--IK 92
+++ ++ ELK++ I KS + H L T+L+FF ALS G+LS+A ++F H I
Sbjct: 13 LNKLSSISELKQLQAIITKSG---LHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSIL 69
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRL- 151
+ + N MIRA ++ + L +Y QML + D T F+LK C++
Sbjct: 70 IHNPFISNTMIRAF------SHSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYK 123
Query: 152 ----------DGLV-----GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
D LV G ++ +V+K G +D VQNS++ + CG V+ AR LFD
Sbjct: 124 LIQESGSCDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARHLFD 183
Query: 197 EMSNRDVVSWNAMIIG-------------------------------YLRSGDLDVALDL 225
++ + +VSWN MI Y+R GD+ A +
Sbjct: 184 QIKDTSLVSWNIMISAYDLVNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQAARRV 243
Query: 226 FRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY 285
F M +RN SWNS+I G V ALELF EMQ++ VKP ++T+ S+L ACA
Sbjct: 244 FGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAG----VKPTEVTLISILGACAE 299
Query: 286 LGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAM 345
GA++ G ++ L+ + +G ALV+MY KCG + A+ +F M K W AM
Sbjct: 300 TGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAM 359
Query: 346 ISVFALNGYGKEAFDTFREMEAE---GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
+ A++GY +E F F EME +RP+ VTF+G+L AC+H GLV+K RW F M
Sbjct: 360 VIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVK 419
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
Y + P HY CM+D+LSR GL EA ++I + P + V +W LLG C+ N EL E
Sbjct: 420 RYKIVPDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAE 479
Query: 463 KVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
+ L L L YV L ++YA+AGR+D+V++ R+ M
Sbjct: 480 ISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEM 519
>gi|225435933|ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14170-like [Vitis vinifera]
Length = 455
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 268/483 (55%), Gaps = 51/483 (10%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS-YATNVFSHIKR 93
+ N L+ +H +++++ D+ L ++LL S G LS ++ +VF H+
Sbjct: 18 LHSSPNPTHLRHLHARLLRT---SLYDNVILSSKLLLM--YSQLGKLSPHSLSVFLHMPH 72
Query: 94 SDLYTYNIMIRANACKSSETNDTH-SGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
++Y++NI+I E + +H K + L+ QM PD T P +L+ C
Sbjct: 73 RNIYSWNIII-------GEFSRSHLPHKSIDLFLQMRHFNQPPDVFTLPLVLRACAASGS 125
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
+G SV+G V+ G+ +FV ++++ +++ G V AR+LFDEM
Sbjct: 126 VKLGVSVHGLCVEMGMEKSLFVASALVFMYVTFGKVLDARVLFDEM-------------- 171
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+R+ W +++ G+ Q AL +F++M S+ V D
Sbjct: 172 -----------------PERDAVLWTAMLAGYAQHEEPMLALSVFRQMVSAGVAL----D 210
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+ + S+L AC LG + HGK VHG++ R L + +G ALV Y KC + +Y +F
Sbjct: 211 GVVMISLLLACGQLGWLKHGKSVHGWITRRCLALGLNLGNALVYFYVKCAALGYSYNLFD 270
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
+MP++D ++W+++I + L+G A D F M GV+PN VTF+G LSAC H+G+VE+
Sbjct: 271 KMPERDVISWSSIILGYGLSGNVDIALDLFDRMRVAGVKPNDVTFLGALSACTHTGMVER 330
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
F MM+ Y V P + HYACM+D L RAG+ +AER I MP+E D V GALLGGC
Sbjct: 331 AHTYFEMMKE-YGVAPELKHYACMVDCLGRAGMLEDAERFIEEMPVEADGAVLGALLGGC 389
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
++HGN E+GE+VA+ L+ L+P + YV L ++YA AGRF+D +K R LMK+R + K VP
Sbjct: 390 RVHGNAEVGERVAKKLMGLEPEKASNYVMLANIYAGAGRFEDAEKVRQLMKQRKLSK-VP 448
Query: 513 GCS 515
GCS
Sbjct: 449 GCS 451
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 240/419 (57%), Gaps = 12/419 (2%)
Query: 128 MLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVISLFMACG 186
M+ TG PD +T ++ C G V+ +VK + DD+ + N+++ ++ CG
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQ 246
AR +FD M +R VVS +++ GY +S +++ A +F +M ++N+ +WN +I + Q
Sbjct: 61 RTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQ 120
Query: 247 GGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL-- 304
G EA+ LF +++ S+ P T +VL+AC + + G+ H ++ + G
Sbjct: 121 NGEEEEAIRLFVQLKRDSI----WPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRF 176
Query: 305 ----DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
+ DV +G +LVDMY K G ++ VF+ M +D ++W AMI +A NG K+A
Sbjct: 177 DFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALH 236
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDIL 420
F M P+ VT +G+LSAC HSGLV++GR F M + + P HY CM+D+L
Sbjct: 237 LFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLL 296
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
RAG EAE LI+ MP EPD +W +LLG C++H NVELGE+ A L +LDP N YV
Sbjct: 297 GRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYV 356
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEEL 539
L +MYA+ G++ DV + R MK+RG+ K+ PGCS +E+ ++ F + + + E+
Sbjct: 357 LLSNMYAEMGKWADVFRVRRSMKDRGVSKQ-PGCSWIEIGSKMNVFLARDNRHPCRNEI 414
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 49/297 (16%)
Query: 64 SLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK 123
S+++ + S ++ A VFS + ++ +N++I A A E + ++
Sbjct: 76 SVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEE------EAIR 129
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVK------FGVCDDVFVQNS 177
L+ Q+ I P T+ +L C +G + V+K FG DVFV NS
Sbjct: 130 LFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNS 189
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
++ +++ G + +F+ M+ RD VSWNAMI+GY ++G
Sbjct: 190 LVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNG-------------------- 229
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVH 296
RA++AL LF+ M S+ PD +T+ VLSAC + G +D G + H
Sbjct: 230 -----------RAKDALHLFERMLCSN----ENPDSVTMIGVLSACGHSGLVDEGRRHFH 274
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALN 352
G+ T +VD+ G+ G ++ A + K+MP + D++ W +++ L+
Sbjct: 275 FMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLH 331
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 268/492 (54%), Gaps = 41/492 (8%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S G L A VF + + +Y MI A + +G+ +KL+++M GISP
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA------REGLAGEAVKLFEEMEEEGISP 395
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D T +L C + G V+ + + + D+FV N+++ ++ CG + A ++
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV- 454
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
F M+ ++I SWN+II G+ + A EAL
Sbjct: 455 ------------------------------FSEMRVKDIISWNTIIGGYSKNCYANEALS 484
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
LF + E+ PD+ T+A VL ACA L A D G+ +HGY+ R+G D + +LV
Sbjct: 485 LFNLLLE---EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DMY KCG + A+ +F ++ KD ++WT MI+ + ++G+GKEA F +M G+ + +
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 601
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
+FV LL AC+HSGLV++G F +MRH +EP V HYAC++D+L+R G +A R I +
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 661
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP+ PD +WGALL GC++H +V+L EKVA+ + +L+P N +YV + ++YA+A +++ V
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQV 721
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K+ R + +RG+RK PGCS +E+ G V+ F S E + L + M G+
Sbjct: 722 KRLRKRIGQRGLRKN-PGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGY 780
Query: 556 GQYIRGLSMEAQ 567
+ ++A+
Sbjct: 781 SPLTKYALIDAE 792
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 225/497 (45%), Gaps = 84/497 (16%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A+ VF +K +NI++ A KS + + + + L+K+M+ +G+ D
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELA-KSGDFSGS-----IGLFKKMMSSGVEMDSY 196
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF + K + G ++G ++K G + V NS+++ ++ V SAR +FDEM
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNI------------------------ 234
+ RDV+SWN++I GY+ +G + L +F +M I
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 235 ----------FSW-----NSIITGFVQGGRAREALELFQEMQSSSV-------------- 265
FS N+++ + + G A +F+EM SV
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 266 -------------EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
EE + PD T+ +VL+ CA +D GK VH +++ + L D+ +
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR-EMEAEGVR 371
AL+DMY KCG ++ A VF EM KD ++W +I ++ N Y EA F +E +
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
P+ T +L ACA +KGR +MR+ Y + HV + ++D+ ++ G A
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAH 554
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHG----NVELGEKVAQYLIDLDPLNHAFYVNLCDMY 486
L + D+ W ++ G MHG + L ++ Q I+ D ++ +V+L
Sbjct: 555 MLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS---FVSLLYAC 610
Query: 487 AKAGRFDDVKKTRNLMK 503
+ +G D+ + N+M+
Sbjct: 611 SHSGLVDEGWRFFNIMR 627
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 150/329 (45%), Gaps = 38/329 (11%)
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
Y GDL A +F +K WN ++ + G ++ LF++M SS VE D
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE----MD 194
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
T + V + + L ++ G+ +HG++ +SG +G +LV Y K V+ A VF
Sbjct: 195 SYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFD 254
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
EM ++D ++W ++I+ + NG ++ F +M G+ + T V + + CA S L+
Sbjct: 255 EMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL 314
Query: 393 G----------------RWCFVMM------------RHVY--LVEPHVYHYACMIDILSR 422
G R+C ++ + V+ + + V Y MI +R
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 423 AGLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFY 479
GL EA +L M E PDV+ A+L C + ++ G++V +++ + D F
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 480 VN-LCDMYAKAGRFDDVKKTRNLMKERGI 507
N L DMYAK G + + + M+ + I
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
R++ N+ + F + G A++L V D T+ SVL CA ++
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLL------CVSGKWDIDPRTLCSVLQLCADSKSLKD 112
Query: 292 GKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFAL 351
GK V ++R +G D +G+ L MY CG ++ A VF E+ + L W +++ A
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 352 NGYGKEAFDTFREMEAEGVRPNHVTF 377
+G + F++M + GV + TF
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTF 198
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 275/514 (53%), Gaps = 46/514 (8%)
Query: 43 ELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIM 102
+LK+IH I+ N + L F +S+S +S+A +F+ I+ +++T+N M
Sbjct: 50 KLKQIHAFSIRHGVPPQNPD---FNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTM 106
Query: 103 IRANACKSSETNDTHSGKCLKLYKQM-LCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
IR A + ++L+ QM + I PD TFPFL K K +D +G ++
Sbjct: 107 IRGFA------ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHS 160
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
VV+ G FVQNS++ ++ G + SA +F+ I+ Y
Sbjct: 161 VVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFE-------------IMSY-------- 199
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
R+ +WNS+I GF G EAL L++EM S VE PD T+ S+LS
Sbjct: 200 ----------RDRVAWNSVINGFALNGMPNEALTLYREMGSEGVE----PDGFTMVSLLS 245
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
AC LGA+ G+ VH Y+ + GL + AL+D+Y KCG A VF EM ++ ++
Sbjct: 246 ACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVS 305
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
WT++I A+NG G EA F E+E +G++P+ +TFVG+L AC+H G++++G F M+
Sbjct: 306 WTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMK 365
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
Y + P + H+ CM+D+L RAG +A IR+MP+ P+ +W LLG C +HG++ELG
Sbjct: 366 EEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELG 425
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
E + L+ + +V L ++YA R+ DV+ R +M +G++K PG S VE+
Sbjct: 426 EVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKK-TPGYSLVELKN 484
Query: 522 VVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
V+EF M EE +L +++++K G+
Sbjct: 485 RVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGY 518
>gi|255543449|ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547798|gb|EEF49290.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 480
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/427 (37%), Positives = 237/427 (55%), Gaps = 15/427 (3%)
Query: 33 NAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIK 92
N + + N +K + +II++ +D L+ +LL C + YAT +F I+
Sbjct: 37 NLLQKGSNFTHVKLVQAKIIRN---NLSDDQLLVRKLLRLCF--SYQKVDYATLIFDQIQ 91
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
+T+N MIRA + +S + L LY M+C G SPD TFPF++K C
Sbjct: 92 NPHTFTWNFMIRA------YNYNGNSQQALLLYNLMICEGFSPDKFTFPFVIKACLDHSA 145
Query: 153 GLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
G V+G +K G D F+ N+++ L+ CG + AR LFD+M+ R VVSW + G
Sbjct: 146 LDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSVVSWTTFVAG 205
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+ G+LD A F M RN+ SW ++I G+V+ R +EA ELFQ MQ ++V +P+
Sbjct: 206 LVACGELDTARAAFDEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLANV----RPN 261
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
T+ +L AC LG+++ G+ +H Y +G V +GTAL+DMY KCG +E A VF+
Sbjct: 262 GFTLVGLLRACTELGSLELGRRIHEYALENGFKVGVFLGTALIDMYSKCGSIEDAKKVFE 321
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
EM KK W +MI+ ++G+GKEA F +ME VRP+ +TFVG+L AC ++ VE
Sbjct: 322 EMQKKSLATWNSMITSLGVHGFGKEALALFAQMEEANVRPDAITFVGVLFACVNTNNVEA 381
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G F M Y + P + HY CMI++ +RA + +E L+ SMPM+ + AL+
Sbjct: 382 GYRYFKYMTEHYGITPMLEHYTCMIELYTRAAMLNEVSELVNSMPMKLNSNPAAALVWPS 441
Query: 453 QMHGNVE 459
+ N E
Sbjct: 442 IIDSNAE 448
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 62/318 (19%)
Query: 219 LDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
+D A +F +++ + F+WN +I + G +++AL L+ M + E PDK T
Sbjct: 80 VDYATLIFDQIQNPHTFTWNFMIRAYNYNGNSQQALLLYNLM----ICEGFSPDKFTFPF 135
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
V+ AC A+D GK VHG+ ++G D + L+D+Y KCG ++ A +F +M +
Sbjct: 136 VIKACLDHSALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRS 195
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF- 397
++WT TFV L AC G ++ R F
Sbjct: 196 VVSWT--------------------------------TFVAGLVAC---GELDTARAAFD 220
Query: 398 -VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM---EPDVFVWGALLGGCQ 453
+ MR+V + MI+ + EA L + M + P+ F LL C
Sbjct: 221 EMPMRNVV-------SWTAMINGYVKNQRPQEAFELFQRMQLANVRPNGFTLVGLLRACT 273
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVN------LCDMYAKAGRFDDVKKTRNLMKERGI 507
G++ELG ++ +Y L + F V L DMY+K G +D KK M+++ +
Sbjct: 274 ELGSLELGRRIHEY-----ALENGFKVGVFLGTALIDMYSKCGSIEDAKKVFEEMQKKSL 328
Query: 508 RKEVPGCSSVEVDGVVHE 525
+S+ V G E
Sbjct: 329 ATWNSMITSLGVHGFGKE 346
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 268/494 (54%), Gaps = 44/494 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS+ YA VF ++ +Y +N + RA T H + L LY +M G+ D
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRA------LTLAGHGEEVLGLYWKMNRIGVESDRF 179
Query: 139 TFPFLLKECTKR---LDGLV-GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
T+ ++LK C D L G ++ + + G V++ +++ +
Sbjct: 180 TYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDM------------- 226
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
Y R G +D A +F M RN+ SW+++I + + G+A EAL
Sbjct: 227 ------------------YARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEAL 268
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
F+EM + + + P+ +T+ SVL ACA L A++ G+ +HGY+ R GLD + + +AL
Sbjct: 269 RTFREMMTETKDS--SPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISAL 326
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
V MYG+CG ++ VF M +D ++W ++IS + ++GYG++A F EM A G P
Sbjct: 327 VTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTP 386
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
VTFV +L AC+H GLVE+G+ F M + ++P V HYACM+D+L RA EA ++++
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQ 446
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
M EP VWG+LLG C++HGNVEL E+ ++ L L+P N YV L D+YA+A +D+
Sbjct: 447 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
VK+ + L++ RG++K +PG +EV ++ F + E++ L L++ MK G
Sbjct: 507 VKRVKKLLEHRGLQK-LPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKG 565
Query: 555 FGQYIRGLSMEAQV 568
+ +G+ E +
Sbjct: 566 YIPQTKGVLYELET 579
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 154/343 (44%), Gaps = 47/343 (13%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
LK ++L SP T+ L+ C R G V+ ++ G D F+ +I +
Sbjct: 62 LKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGM 121
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ G V AR +FD+ R + WNA LFR
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNA----------------LFR-------------- 151
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC-AYLGAIDH---GKWVHG 297
G E L L+ +M VE D+ T VL AC A DH GK +H
Sbjct: 152 -ALTLAGHGEEVLGLYWKMNRIGVES----DRFTYTYVLKACVASECTADHLTKGKEIHA 206
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
+L R G + V I T LVDMY + GCV+ A VF MP ++ ++W+AMI+ +A NG E
Sbjct: 207 HLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFE 266
Query: 358 AFDTFREM--EAEGVRPNHVTFVGLLSACAHSGLVEKGRWC--FVMMRHVYLVEPHVYHY 413
A TFREM E + PN VT V +L ACA +E+GR +++ R + + P +
Sbjct: 267 ALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVI--- 323
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ ++ + R G +R+ M + DV W +L+ +HG
Sbjct: 324 SALVTMYGRCGKLDVGQRVFDRM-HDRDVVSWNSLISSYGVHG 365
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 191/462 (41%), Gaps = 102/462 (22%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
KEIH + + N H ++T L+ A G + YA+ VF+ + ++ +++ MI
Sbjct: 202 KEIHAHLTRR---GYNSHVYIMTTLVDMYARF--GCVDYASYVFNGMPVRNVVSWSAMI- 255
Query: 105 ANACKSSETNDTHSGKCLKLYKQMLC--TGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
AC + + + + L+ +++M+ SP+ +T +L+ C G ++G
Sbjct: 256 --ACYA---KNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGY 310
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
+++ G+ + V +++++++ CG + + +FD M +RDVVSWN
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWN--------------- 355
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
S+I+ + G R+A+++F+EM ++ P +T SVL A
Sbjct: 356 ----------------SLISSYGVHGYGRKAIQIFEEMLANGAS----PTPVTFVSVLGA 395
Query: 283 CAYLGAIDHGKWV-HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
C++ G ++ GK + R G+ V +VD+ G+ ++
Sbjct: 396 CSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLD---------------- 439
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
EA ++M E P + LL +C G VE R
Sbjct: 440 ---------------EAAKMVQDMRTE---PGPKVWGSLLGSCRIHGNVELAERA---SR 478
Query: 402 HVYLVEP-HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
++ +EP + +Y + DI + A ++ E +R+ + + L G C M E+
Sbjct: 479 RLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRG----LQKLPGRCWM----EV 530
Query: 461 GEKVAQYLIDLDPLN------HAFYVNLCDMYAKAGRFDDVK 496
K+ + + +D N HAF V L + + G K
Sbjct: 531 RRKMYSF-VSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTK 571
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 16/221 (7%)
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
S N +I + G+ ++AL + + S P + T ++ C + ++ G
Sbjct: 47 ISNNQLIQSLCKEGKLKQALRVLSQESS--------PSQQTYELLILCCGHRSSLSDGLR 98
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
VH ++ +G D D + T L+ MY G V+ A VF + K+ W A+ L G+
Sbjct: 99 VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS----GLVEKGRWCFV-MMRHVYLVEPH 409
G+E + +M GV + T+ +L AC S + KG+ + R Y H
Sbjct: 159 GEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGY--NSH 216
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
VY ++D+ +R G A + MP+ +V W A++
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFNGMPVR-NVVSWSAMIA 256
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 287/532 (53%), Gaps = 51/532 (9%)
Query: 25 ESTKLILRNAIDECKNMRELK---EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
E + + AI C + +L EIH ++I S L + S + + C G L
Sbjct: 204 EPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKC-----GHL 258
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A VF + + + +N MI K S C++L+K+M G+ P T
Sbjct: 259 EMAIEVFEQMPKKTVVAWNSMISGYGLKGD------SISCIQLFKRMYNEGVKPTLTTLS 312
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
L+ C++ L G V+G ++ + DVF+ +S++ L+ CG V
Sbjct: 313 SLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKV------------- 359
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
++A ++F+ + K + SWN +I+G+V G+ EAL LF EM+
Sbjct: 360 ------------------ELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMR 401
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
S VE PD IT SVL+AC+ L A++ G+ +H + LD + V+ AL+DMY KC
Sbjct: 402 KSYVE----PDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKC 457
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G V+ A+ VFK +PK+D ++WT+MI+ + +G A + F EM ++P+ VTF+ +L
Sbjct: 458 GAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAIL 517
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP-MEP 440
SAC H+GLV++G + F M +VY + P V HY+C+ID+L RAG EA +++ P +
Sbjct: 518 SACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRD 577
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
DV + L C++H N++LG ++A+ LID DP + + Y+ L +MYA A ++D+V+ R+
Sbjct: 578 DVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRS 637
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
MKE G++K PGCS +E++ + F ++ + + E + L+ LS M++
Sbjct: 638 KMKELGLKKN-PGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMED 688
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 202/451 (44%), Gaps = 90/451 (19%)
Query: 106 NACKSSETNDTHSG--------KCLKLYKQML-CTGISPDCLTFPFLLKECTKRLDGLVG 156
N C+ S N +G + L+L++++L + PD T+P +LK C ++G
Sbjct: 66 NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLG 125
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++ +VK G+ D+ V +S++ ++ C NA
Sbjct: 126 KMIHTCLVKTGLMMDIVVGSSLVGMYAKC---------------------NA-------- 156
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
+ A+ LF M ++++ WN++I+ + Q G +EALE F M+ E P+ +TI
Sbjct: 157 --FEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFE----PNSVTI 210
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+ +S+CA L ++ G +H L SG D I +ALVDMYGKCG +E A VF++MPK
Sbjct: 211 TTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPK 270
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
K +AW +MIS + L G F+ M EGV+P T L+ C+ S + +G++
Sbjct: 271 KTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFV 330
Query: 397 FVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMP--------------- 437
H Y ++ V+ + ++D+ + G AE + + +P
Sbjct: 331 -----HGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYV 385
Query: 438 -------------------MEPDVFVWGALLGGCQMHGNVELGEKVAQYLID--LDPLNH 476
+EPD + ++L C +E GE++ +I+ LD N
Sbjct: 386 AEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDN-NE 444
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
L DMYAK G D+ + +R +
Sbjct: 445 VVMGALLDMYAKCGAVDEAFSVFKCLPKRDL 475
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 147/319 (46%), Gaps = 43/319 (13%)
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
LL+ C G ++ +VV G+ +D+F+ ++I+L+++C A+ +FD M N
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
+S WN ++ G+ + EALELF+++
Sbjct: 69 EISL------------------------------WNGLMAGYTKNYMYVEALELFEKLLH 98
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
+KPD T SVL AC L GK +H L ++GL D+V+G++LV MY KC
Sbjct: 99 YPY---LKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCN 155
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
E+A +F EMP+KD W +IS + +G KEA + F M G PN VT +S
Sbjct: 156 AFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAIS 215
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEP----HVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+CA + +G M H L+ + + ++D+ + G A + MP
Sbjct: 216 SCARLLDLNRG-----MEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMP- 269
Query: 439 EPDVFVWGALLGGCQMHGN 457
+ V W +++ G + G+
Sbjct: 270 KKTVVAWNSMISGYGLKGD 288
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 36/258 (13%)
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
D + +L AC ++ GK +H + GL D+ + L+++Y C + A VF
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF 61
Query: 332 KEMPKKDTLA-WTAMISVFALNGYGKEAFDTFRE-MEAEGVRPNHVTFVGLLSACA---- 385
M ++ W +++ + N EA + F + + ++P+ T+ +L AC
Sbjct: 62 DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYK 121
Query: 386 -------HSGLVEKGRW---------------CFVMMRHVYLV----EPHVYHYACMIDI 419
H+ LV+ G C + ++L E V + +I
Sbjct: 122 YVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISC 181
Query: 420 LSRAGLFSEAER---LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
++G F EA L+R EP+ + C ++ G ++ + LI+ L
Sbjct: 182 YYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD 241
Query: 477 AFYVN-LCDMYAKAGRFD 493
+F + L DMY K G +
Sbjct: 242 SFISSALVDMYGKCGHLE 259
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 231/365 (63%), Gaps = 9/365 (2%)
Query: 167 GVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR-----DVVSWNAMIIGYLRSGDLDV 221
GV DV S+ S CG + R + M R D+++ NA++ Y + ++
Sbjct: 266 GVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEA 325
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
A +F M R+ SWN++ITG++Q G A EA+ ++ MQ E +KP + T SVL
Sbjct: 326 AQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK---HEGLKPIQGTFVSVLP 382
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
A ++LGA+ G +H ++GL+ DV +GT ++D+Y KCG ++ A +F++ P++ T
Sbjct: 383 AYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGP 442
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
W A+IS ++G+G +A F +M+ EG+ P+HVTFV LL+AC+H+GLV++GR F MM+
Sbjct: 443 WNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQ 502
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
Y ++P HYACM+D+ RAG +A IR+MP++PD +WGALLG C++HGNVE+G
Sbjct: 503 TAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMG 562
Query: 462 EKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDG 521
+ +Q L +LDP N +YV + +MYAK G++D V + R+L++ + ++K PG SS+EV
Sbjct: 563 KVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQK-TPGWSSIEVKR 621
Query: 522 VVHEF 526
V+ F
Sbjct: 622 SVNVF 626
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 150/315 (47%), Gaps = 13/315 (4%)
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
D + A++ YLR G + A F M+ R++ +WN++++G + RA EA+ LF M
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRM- 161
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
V E V D +T++SVL C LG +H Y + GLD ++ + A++D+YGK
Sbjct: 162 ---VMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKL 218
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G +E VF M +D + W ++IS G A + F M GV P+ +T + L
Sbjct: 219 GMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLA 278
Query: 382 SACAHSGLVEKGR--WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
SA A G + GR C+ M+R + V + A ++D+ ++ A+R+ SMP+
Sbjct: 279 SAIAQCGDICGGRSVHCY-MVRRGWDVGDIIAGNA-IVDMYAKLSKIEAAQRMFDSMPVR 336
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLID---LDPLNHAFYVNLCDMYAKAGRFDDVK 496
D W L+ G +G V ++ L P+ F V++ Y+ G
Sbjct: 337 -DAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTF-VSVLPAYSHLGALQQGT 394
Query: 497 KTRNLMKERGIRKEV 511
+ L + G+ +V
Sbjct: 395 RMHALSIKTGLNLDV 409
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 148/350 (42%), Gaps = 51/350 (14%)
Query: 27 TKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATN 86
T L L +AI +C ++ + +H +++ + D +I + + A
Sbjct: 273 TLLSLASAIAQCGDICGGRSVHCYMVR----RGWDVGDIIAGNAIVDMYAKLSKIEAAQR 328
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCLTFPFLLK 145
+F + D ++N +I + + + + + +Y M G+ P TF +L
Sbjct: 329 MFDSMPVRDAVSWNTLI------TGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLP 382
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
+ G ++ +K G+ DV+V VI L+ CG + A +LF++ R
Sbjct: 383 AYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGP 442
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
WNA+I G V G A+ AL LF +MQ
Sbjct: 443 WNAVISGV------------------------------GVHGHGAK-ALSLFSQMQ---- 467
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDMYGKCGCV 324
+E + PD +T S+L+AC++ G +D G+ ++ + G+ +VDM+G+ G +
Sbjct: 468 QEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQL 527
Query: 325 ERAYGVFKEMP-KKDTLAWTAMISVFALNG---YGKEAFDTFREMEAEGV 370
+ A+ + MP K D+ W A++ ++G GK A E++ + V
Sbjct: 528 DDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNV 577
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 10/164 (6%)
Query: 299 LRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEA 358
LR L D ALV Y + G V AY F EM +D AW AM+S N EA
Sbjct: 95 LRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEA 154
Query: 359 FDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV----EPHVYHYA 414
F M EGV + VT +L C V G + H+Y V + ++
Sbjct: 155 VGLFGRMVMEGVAGDAVTVSSVLPMC-----VLLGDRALALAMHLYAVKHGLDDELFVCN 209
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
MID+ + G+ E ++ M D+ W +++ G + G V
Sbjct: 210 AMIDVYGKLGMLEEVRKVFDGMSSR-DLVTWNSIISGHEQGGQV 252
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 274/516 (53%), Gaps = 18/516 (3%)
Query: 42 RELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNI 101
R L+ H ++IK Q +L+ A + S L +F R DL+ Y+
Sbjct: 20 RSLRRAHARLIKEGLAQHPPAPALLV-----SAYAKSRLLPDTRLLFDETPRRDLHLYSS 74
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCT-GISPDCLTFPFLLKECTKRLDGL-VGASV 159
++ A SE+ + L L ++ML + PD + T RL L +G +
Sbjct: 75 LL--AAVSHSESPEL----VLPLLRRMLSADALRPDHFVLASI-ASATARLRSLCLGKQL 127
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+G V D V++S+I ++ CG AR +FD + ++ V W A+I GY+ +G
Sbjct: 128 HGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRS 187
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
D AL+LFR M R +F+W ++I+GFV+ G + A++LF +M+ V D ++S
Sbjct: 188 DEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVS---IDDAFVLSSA 244
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
+ A L A G+ +H R G +++G A+VDMY KC + A VF+E+ +D
Sbjct: 245 IGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRDI 304
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM 399
++WT M+ A +G +EAF + M GV+PN VTFVGL+ AC+H+GLV+KGR F
Sbjct: 305 ISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDS 364
Query: 400 MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
M+ Y + P + HY C +D+LSR+G +EAE LI +MP PD W +LL C+ + N E
Sbjct: 365 MKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAE 424
Query: 460 LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEV 519
+ +VA L++L P + YV L ++YA G++D V R LM + IRKE PG S +EV
Sbjct: 425 MSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADMEIRKE-PGYSWIEV 483
Query: 520 DGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
F P ++EE++ L L M+ G+
Sbjct: 484 GREFRLFHAGEVPIDLREEILGFLEELVSEMRQRGY 519
>gi|242051158|ref|XP_002463323.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
gi|241926700|gb|EER99844.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
Length = 576
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 172/500 (34%), Positives = 268/500 (53%), Gaps = 53/500 (10%)
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
++YN+ +R A +T+ L+L+ ML + PD T PFLL + V
Sbjct: 82 FSYNVALRFFASSRPDTS-------LRLFLSMLRAELRPDAYTLPFLLLAAARCPSPAVA 134
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
S + + K G+ D +S+I+++ G +AR +FD + +RDVVSWN+++ Y R+
Sbjct: 135 RSAHAFLEKLGLRDHDHTVHSLITMYSCLGDHLTARRVFDGIPHRDVVSWNSIMKAYERA 194
Query: 217 ----------------------------------------GDLDVALDLFRRMKKRNIFS 236
G+++ A +F + +++ +
Sbjct: 195 ACRDAGNLVLGKWVEEWVRSAGMEVDSLIGSALVGMYEKCGEMEEARRVFDGISNKDVVA 254
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
WN++ITG+ Q G + EA+ LF M+ E ++PDKIT+ VLS+CA +GA++ G +
Sbjct: 255 WNAMITGYAQNGMSNEAIALFHSMR----EAGLRPDKITLVGVLSSCAAVGALELGVELD 310
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
GY GL +V +GTALVDMY KCG +E+A VF +MP K+ +W A+I A NG G
Sbjct: 311 GYALHRGLYSNVYVGTALVDMYAKCGDLEKATYVFGKMPFKNEASWNALICGLAFNGRGY 370
Query: 357 EAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+A F M E G++P+ +TF+G+LSAC H+GL+E GR F + V+ + P + HY+C
Sbjct: 371 DAIQQFELMRNEKGLQPDDITFIGVLSACVHAGLLEYGRRLFSSLTPVFKIIPKIEHYSC 430
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
++D+L+RAG A I MP + D + GALL C+ N E+GEKV ++ L+P N
Sbjct: 431 IVDLLARAGHLEAAWDFIEKMPGKVDAVMLGALLAACRKCKNAEVGEKVINRIMKLEPTN 490
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
YV +YA + + D+ + LM+ERG+ K PGCS VEV G V EF P+
Sbjct: 491 SWNYVVSSKIYATSDKMDESARMIGLMRERGVNK-TPGCSWVEVHGKVLEFYASTEPQHG 549
Query: 536 KEELVLILNGLSKIMKNGGF 555
E++ ++ L M+ G+
Sbjct: 550 AEDMYQLMGILVNEMRLEGY 569
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 189/544 (34%), Positives = 287/544 (52%), Gaps = 48/544 (8%)
Query: 15 SPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCA 74
SP + N +S L AI C ++ + +H ++IKS N +H I L
Sbjct: 28 SPTFHAFSNVDSLVSALITAISTCSSISYCRALHCRVIKS----VNYNHGFIGDQLVSSY 83
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKL-YKQMLCTGI 133
+ + G A +F + DL ++N +I S + G CL L ++ G+
Sbjct: 84 VEL-GCTKDALELFDELPDKDLVSWNSLI------SGFSRRADLGICLGLLFRMRFEMGL 136
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
P+ +T ++ C + VG ++G VK G+ +V V NS+I+L+ CG + +A
Sbjct: 137 KPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACC 196
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LF+ MS + +VSWN+M+ ++ G + + F M++ I S
Sbjct: 197 LFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINS----------------- 239
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
D+ T+ S+L AC LG + VHGY+ GLD ++ I TA
Sbjct: 240 ------------------DQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATA 281
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
L+D+Y K G + + VF M D +AWTAM+S +A++G G+EA + F M EGV P+
Sbjct: 282 LLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPD 341
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
HVTF LLSAC+HSGLVE+G+ F +M Y VE V HY+CM+D+L R+G ++A +LI
Sbjct: 342 HVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLI 401
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFD 493
+SMPMEP+ VWGAL+G C++ GN+ELG++VA+ L LDP + Y+ L +MY+ AG++
Sbjct: 402 KSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWR 461
Query: 494 DVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNG 553
D K R LMKER + + PGCS +E +H F M E++ L L + +
Sbjct: 462 DASKVRALMKERVLIRN-PGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREV 520
Query: 554 GFGQ 557
GF
Sbjct: 521 GFAS 524
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 275/546 (50%), Gaps = 53/546 (9%)
Query: 10 YSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
+ LL +P+ ++ P + L++A +R +++H + +K P TN H ++T L
Sbjct: 517 HCLLPNPSHLTIP------IALKSASRLPHPLRAGEQLHARSLKLPS-HTNPH--VLTSL 567
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
L A G L A VF + + +I A H + +
Sbjct: 568 LSLYA--KCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVH------VARNAF 619
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
G+ PD T +L C + D G +V+ + GV VFV + + L++ CG +
Sbjct: 620 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 679
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
AR +FD +M+ ++ +W +++ G+ G
Sbjct: 680 KAREVFD-------------------------------KMRHKDAVAWGAMVGGYASNGH 708
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
REAL+LF MQ+ E +KPD +A LSAC LGA+D G+ + + V
Sbjct: 709 PREALDLFLAMQA----EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 764
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+GTAL+DMY KCG A+ VF++M KKD + W AMI + G+ K AF +ME G
Sbjct: 765 LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSG 824
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
V+ N TF+GLL +C H+GL++ GR F M +Y + P + HY CM+D+LSRAGL EA
Sbjct: 825 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA 884
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
+L+ MPM + + GALLGGC++H N EL E V + LI L+P N YV L ++Y+
Sbjct: 885 HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNR 944
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
GR++D K R MK +G+ K VP CS VE +G VHEF + + +++ L+ L
Sbjct: 945 GRWEDAAKLRLDMKAKGVEK-VPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLE 1003
Query: 550 MKNGGF 555
MK G+
Sbjct: 1004 MKTMGY 1009
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 268/492 (54%), Gaps = 41/492 (8%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S G L A VF + + +Y MI A + +G+ +KL+++M GISP
Sbjct: 191 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA------REGLAGEAVKLFEEMEEEGISP 244
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
D T +L C + G V+ + + + D+FV N+++ ++ CG + A ++
Sbjct: 245 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV- 303
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
F M+ ++I SWN+II G+ + A EAL
Sbjct: 304 ------------------------------FSEMRVKDIISWNTIIGGYSKNCYANEALS 333
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
LF + E+ PD+ T+A VL ACA L A D G+ +HGY+ R+G D + +LV
Sbjct: 334 LFNLLLE---EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 390
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DMY KCG + A+ +F ++ KD ++WT MI+ + ++G+GKEA F +M G+ + +
Sbjct: 391 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 450
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
+FV LL AC+HSGLV++G F +MRH +EP V HYAC++D+L+R G +A R I +
Sbjct: 451 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 510
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP+ PD +WGALL GC++H +V+L EKVA+ + +L+P N +YV + ++YA+A +++ V
Sbjct: 511 MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQV 570
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K+ R + +RG+RK PGCS +E+ G V+ F S E + L + M G+
Sbjct: 571 KRLRKRIGQRGLRKN-PGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGY 629
Query: 556 GQYIRGLSMEAQ 567
+ ++A+
Sbjct: 630 SPLTKYALIDAE 641
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 220/488 (45%), Gaps = 84/488 (17%)
Query: 88 FSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKEC 147
F +K +NI++ A KS + + + + L+K+M+ +G+ D TF + K
Sbjct: 1 FDEVKIEKALFWNILMNELA-KSGDFSGS-----IGLFKKMMSSGVEMDSYTFSCVSKSF 54
Query: 148 TKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWN 207
+ G ++G ++K G + V NS+++ ++ V SAR +FDEM+ RDV+SWN
Sbjct: 55 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 114
Query: 208 AMIIGYLRSGDLDVALDLFRRMKKRNI--------------------------------- 234
++I GY+ +G + L +F +M I
Sbjct: 115 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 174
Query: 235 -FSW-----NSIITGFVQGGRAREALELFQEMQSSSV----------------------- 265
FS N+++ + + G A +F+EM SV
Sbjct: 175 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 234
Query: 266 ----EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
EE + PD T+ +VL+ CA +D GK VH +++ + L D+ + AL+DMY KC
Sbjct: 235 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 294
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR-EMEAEGVRPNHVTFVGL 380
G ++ A VF EM KD ++W +I ++ N Y EA F +E + P+ T +
Sbjct: 295 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 354
Query: 381 LSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
L ACA +KGR +MR+ Y + HV + ++D+ ++ G A L +
Sbjct: 355 LPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIA-S 411
Query: 440 PDVFVWGALLGGCQMHG----NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
D+ W ++ G MHG + L ++ Q I+ D ++ +V+L + +G D+
Sbjct: 412 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS---FVSLLYACSHSGLVDEG 468
Query: 496 KKTRNLMK 503
+ N+M+
Sbjct: 469 WRFFNIMR 476
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 144/316 (45%), Gaps = 38/316 (12%)
Query: 226 FRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY 285
F +K WN ++ + G ++ LF++M SS VE D T + V + +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE----MDSYTFSCVSKSFSS 56
Query: 286 LGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAM 345
L ++ G+ +HG++ +SG +G +LV Y K V+ A VF EM ++D ++W ++
Sbjct: 57 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 116
Query: 346 ISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG------------ 393
I+ + NG ++ F +M G+ + T V + + CA S L+ G
Sbjct: 117 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 176
Query: 394 ----RWCFVMM------------RHVY--LVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
R+C ++ + V+ + + V Y MI +R GL EA +L
Sbjct: 177 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 236
Query: 436 MPME---PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGR 491
M E PDV+ A+L C + ++ G++V +++ + D F N L DMYAK G
Sbjct: 237 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 296
Query: 492 FDDVKKTRNLMKERGI 507
+ + + M+ + I
Sbjct: 297 MQEAELVFSEMRVKDI 312
>gi|354805159|gb|AER41579.1| CRR4 [Oryza brachyantha]
Length = 626
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 175/533 (32%), Positives = 284/533 (53%), Gaps = 22/533 (4%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
PPN + +LR A R + +H QI++ + + + + C G
Sbjct: 102 PPNGFTFTFLLR-ACALLGFPRPCRCVHGQIVRWGFGSEVFVQNTLLDVYYRCG--GPGR 158
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
++ A VF + D+ ++N +I T ++L++ M + +++
Sbjct: 159 VAAARQVFDEMVDRDVVSWNSIIGVYMSSGDYTG------AMELFEAM----PERNVVSW 208
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
L+ + D + +V+ ++ + N +IS + + G V +AR +FD M
Sbjct: 209 NTLVAGFARVGDMVTAQTVFDRMPS----RNAISWNLMISGYASSGDVEAARSMFDRMDQ 264
Query: 201 R-DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+ DVVSW AM+ Y + GDLD A +LF M +N+ SWN++ITG+ R EAL FQ
Sbjct: 265 KKDVVSWTAMVSAYAKIGDLDTAKELFDHMPLKNLVSWNAMITGYNHNSRYGEALRTFQL 324
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M +E +PD+ T+ SV+SACA LG++++ W+ ++R+S + + +G AL+DM+
Sbjct: 325 MM---LEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIRKSNVHLTIALGNALIDMFA 381
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG V RA +F EM + + WT MIS FA NG +EA + M EGV + + F+
Sbjct: 382 KCGDVGRAQSIFYEMKTRCIITWTTMISGFAFNGLCREALLVYNNMCREGVELDDMVFIA 441
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
L+AC H GL+++G F M Y ++P + HY C++D+L RAG EA I SMP+E
Sbjct: 442 ALAACVHGGLLQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQEAVLFIESMPLE 501
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
P V +W LL C HGN E + V++ + +L+P N ++ V + + A GR+D V R
Sbjct: 502 PSVVIWATLLSSCVAHGNAEFIDYVSKKITELEPFNSSYQVLVSNSSALEGRWDGVIGAR 561
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
+M+ GI K VPG SS++V VHEF K + ++E+ ++GL +M++
Sbjct: 562 TIMRNWGIEK-VPGSSSIQVGSEVHEFLAKDTMHERRKEIYETVDGLMALMRH 613
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 178/347 (51%), Gaps = 31/347 (8%)
Query: 121 CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS-----VYGQVVKFGVCDDVFVQ 175
L Y ML G+ P+ TF FLL+ C L+G V+GQ+V++G +VFVQ
Sbjct: 89 ALAAYTAMLAAGVPPNGFTFTFLLRAC-----ALLGFPRPCRCVHGQIVRWGFGSEVFVQ 143
Query: 176 NSVISLFMACG---FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKR 232
N+++ ++ CG V +AR +FDEM +RDVVSWN++I Y+ SGD A++LF M +R
Sbjct: 144 NTLLDVYYRCGGPGRVAAARQVFDEMVDRDVVSWNSIIGVYMSSGDYTGAMELFEAMPER 203
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
N+ SWN+++ GF + G A +F M S + I+ ++S A G ++
Sbjct: 204 NVVSWNTLVAGFARVGDMVTAQTVFDRMPSR--------NAISWNLMISGYASSGDVEAA 255
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+ R DVV TA+V Y K G ++ A +F MP K+ ++W AMI+ + N
Sbjct: 256 R---SMFDRMDQKKDVVSWTAMVSAYAKIGDLDTAKELFDHMPLKNLVSWNAMITGYNHN 312
Query: 353 GYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLVEKGRW--CFVMMRHVYLVEPH 409
EA TF+ M EG RP+ T V ++SACA G VE W F+ +V+L
Sbjct: 313 SRYGEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIRKSNVHLT--- 369
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ +ID+ ++ G A+ + M + W ++ G +G
Sbjct: 370 IALGNALIDMFAKCGDVGRAQSIFYEMKTRC-IITWTTMISGFAFNG 415
>gi|242085550|ref|XP_002443200.1| hypothetical protein SORBIDRAFT_08g015300 [Sorghum bicolor]
gi|241943893|gb|EES17038.1| hypothetical protein SORBIDRAFT_08g015300 [Sorghum bicolor]
Length = 502
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 259/481 (53%), Gaps = 45/481 (9%)
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
F S G+L A VF + ++ YN+++ A+ G ++L ++L
Sbjct: 47 FVLLYSRCGALHRARQVFDGMSFPSMHAYNVLLAASP----------PGTAVELISRLLA 96
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
+G+ PD + P +L+ C + D L+GA +G ++ G+ +V V +++ +
Sbjct: 97 SGLRPDRYSIPAVLRACAELRDMLLGAVFHGLALRLGLLANVVVSGALLDM--------- 147
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
Y ++G L A +F M +R+ WN ++TG+ + GR+
Sbjct: 148 ----------------------YAKTGMLADATRVFDEMPERDAVVWNCMVTGYARAGRS 185
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDCDVV 309
E LELF++ Q SV+ + D + +VL+ CA G + G+ +HG + R D D+
Sbjct: 186 EETLELFRKAQIESVD--MARDLRAVPNVLNVCANEGQLMKGREIHGRMVRCFAFDSDIA 243
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+G ALVDMY KCG V+ A VF M ++ ++W+ +IS + ++G GKEA + EM + G
Sbjct: 244 VGNALVDMYAKCGQVDGAQAVFASMKVRNVMSWSTLISCYGVHGMGKEALRIYEEMVSRG 303
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
V+PN +TF+ +LS+C+HSGLV GR F M V+ VEP HYACM+D+L RAG EA
Sbjct: 304 VKPNCITFISILSSCSHSGLVSDGRRIFESMSKVHAVEPTADHYACMVDLLGRAGAIEEA 363
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
+IR MPMEP +WGALL C H NV++GE A L +L+ N + YV LC +Y
Sbjct: 364 VGIIRKMPMEPGASLWGALLSACATHNNVDVGEVAAYKLFELEEGNASNYVTLCGIYDAI 423
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
GR D V R+ M+E G+ K PGCS V V G H F P+ ++ +++ +L L +
Sbjct: 424 GRSDSVSGIRSRMRELGMVK-TPGCSWVHVKGRAHAFYQGCIPRYLRRQMLWVLGHLLED 482
Query: 550 M 550
M
Sbjct: 483 M 483
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 6/192 (3%)
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
M P ++ ++ CA GA+ G VH GL + + T V +Y +CG + RA
Sbjct: 1 MPPPTAGRLSVLIRRCAASGALSPGAQVHAQGLVGGLLPNTTLDTDFVLLYSRCGALHRA 60
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF M A+ +++ A + + A G+RP+ + +L ACA
Sbjct: 61 RQVFDGMSFPSMHAYNVLLAASPPG----TAVELISRLLASGLRPDRYSIPAVLRACAEL 116
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
+ G F + + +V ++D+ ++ G+ ++A R+ MP E D VW
Sbjct: 117 RDMLLGA-VFHGLALRLGLLANVVVSGALLDMYAKTGMLADATRVFDEMP-ERDAVVWNC 174
Query: 448 LLGGCQMHGNVE 459
++ G G E
Sbjct: 175 MVTGYARAGRSE 186
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 171/490 (34%), Positives = 264/490 (53%), Gaps = 42/490 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G+L A +F ++ D ++N +I A+ E N+ H + L L+ ML + + PD
Sbjct: 421 GALMEACLIFDDMEIKDAVSWNAIIAAH-----EQNE-HVEETLALFVSMLRSTMEPDDY 474
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF ++K C + G V+G+V+K G+ D FV +++I ++ CG + A + +
Sbjct: 475 TFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHE-- 532
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
R+++R SWNSII+GF + AL F
Sbjct: 533 -----------------------------RLEERTTVSWNSIISGFSSEKQGENALSYFS 563
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M ++ V PD T A+VL CA L ++ GK +HG + + L DV I + +VDMY
Sbjct: 564 RM----LQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMY 619
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG ++ + +F++ PK+D + W+AMI +A +G G++A F EM+ + V+PNH F+
Sbjct: 620 SKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFI 679
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+L ACAH G V+KG F MR Y ++P + HY+CM+D+L R+G +EA LI SMP
Sbjct: 680 SVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPF 739
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
E D +W LLG C++ GNVE+ EK A L+ LDP + + YV L ++YA AG + +V K
Sbjct: 740 EADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKI 799
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQY 558
R+ MK ++KE PGCS ++V VH F + EE+ + L MK G+
Sbjct: 800 RSFMKNYKLKKE-PGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPE 858
Query: 559 IRGLSMEAQV 568
I G ++ +V
Sbjct: 859 IDGFLLDEEV 868
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 137/256 (53%), Gaps = 4/256 (1%)
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
LTF + ++C+ G + Q+ G VFV N ++ + C + A +FD+
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M RDV+SWN MI GY G+++ A LF M +R++ SWNS+++ ++Q G R+++E+F
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+M+ ++ D T A VL AC + G VH + G D DVV GTALVDM
Sbjct: 159 TKMRLLEIQH----DYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDM 214
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y C ++ A+ +F EMP+++++ W+A+I+ + N E ++ M EG+ + TF
Sbjct: 215 YSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATF 274
Query: 378 VGLLSACAHSGLVEKG 393
+CA E G
Sbjct: 275 ASAFRSCAGLSAFELG 290
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 177/379 (46%), Gaps = 46/379 (12%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L++++ + + + D ++ L C+ L G ++G VK G+ ++ V N+++
Sbjct: 355 EALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTIL 414
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
++ CG + A ++FD+M +D VSWNA
Sbjct: 415 DMYAKCGALMEACLIFDDMEIKDAVSWNA------------------------------- 443
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
II Q E L LF M S++E PD T SV+ ACA A+++G VHG +
Sbjct: 444 IIAAHEQNEHVEETLALFVSMLRSTME----PDDYTFGSVVKACAGKKALNYGMEVHGRV 499
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
+SG+ D +G+A++DMY KCG + A + + + ++ T++W ++IS F+ G+ A
Sbjct: 500 IKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENAL 559
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
F M GV P++ T+ +L CA+ VE G+ + + L VY + ++D+
Sbjct: 560 SYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQL-HSDVYIASTIVDM 618
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY-----LIDLDPL 474
S+ G ++ + P + D W A++ HG LGE + L ++ P
Sbjct: 619 YSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAYHG---LGEDAIKLFEEMQLQNVKP- 673
Query: 475 NHAFYVNLCDMYAKAGRFD 493
NH ++++ A G D
Sbjct: 674 NHTIFISVLRACAHMGFVD 692
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 207/488 (42%), Gaps = 82/488 (16%)
Query: 26 STKLILRNAIDECKNMREL---KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS 82
+ KL + +C N++ + K+ H QI + + T + + L F+C +L+
Sbjct: 36 TKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCL--LQFYCKCL---NLN 90
Query: 83 YATNVFSHIKRSDLYTYNIMIRA-------------------------NACKSSETNDTH 117
YA NVF + + D+ ++N MI N+ S +
Sbjct: 91 YAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGF 150
Query: 118 SGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS 177
K ++++ +M I D TF +LK CT D +G V+ ++ G
Sbjct: 151 HRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMG---------- 200
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
FD DVV+ A++ Y LD A ++F M +RN W
Sbjct: 201 -----------------FDS----DVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCW 239
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
+++I G+V+ R E L+L++ M ++E + + T AS +CA L A + G +H
Sbjct: 240 SAVIAGYVRNDRFTEGLKLYKVM----LDEGMGVSQATFASAFRSCAGLSAFELGTQLHA 295
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
Y ++ D ++GTA +DMY KC + A VF P + A+I +A E
Sbjct: 296 YALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLE 355
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSAC-AHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC- 415
A + FR ++ + + ++ G L+AC A G +E + H V+ + C
Sbjct: 356 ALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG------IQLHGLAVKCGLDFNICV 409
Query: 416 ---MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE--LGEKVAQYLID 470
++D+ ++ G EA + M ++ D W A++ + + +VE L V+
Sbjct: 410 ANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAAHEQNEHVEETLALFVSMLRST 468
Query: 471 LDPLNHAF 478
++P ++ F
Sbjct: 469 MEPDDYTF 476
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 194/476 (40%), Gaps = 93/476 (19%)
Query: 76 SVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISP 135
S L +A N+F + + ++ +I ND + + LKLYK ML G+
Sbjct: 216 STCKKLDHAFNIFCEMPERNSVCWSAVIAGYV-----RNDRFT-EGLKLYKVMLDEGMGV 269
Query: 136 DCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLF 195
TF + C +G ++ +K D V + + ++ C + AR +F
Sbjct: 270 SQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVF 329
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
+ N S NA+I+G + + + EALE
Sbjct: 330 NTFPNPTRQSHNALIVG-------------------------------YARQDQVLEALE 358
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
+F+ +Q S ++ D+I+++ L+AC+ + G +HG + GLD ++ + ++
Sbjct: 359 IFRSLQKSYLD----FDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTIL 414
Query: 316 DMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHV 375
DMY KCG + A +F +M KD ++W A+I+ N + +E F M + P+
Sbjct: 415 DMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDY 474
Query: 376 TFVGLLSACA-----HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
TF ++ ACA + G+ GR M + V + +ID+ + G+ EAE
Sbjct: 475 TFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVG------SAIIDMYCKCGMLVEAE 528
Query: 431 R---------------LIRSMPME-------------------PDVFVWGALLGGCQMHG 456
+ +I E PD F + +L C
Sbjct: 529 KIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLA 588
Query: 457 NVELGEKVAQYLIDLDPLNHAFYV--NLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
VELG+++ ++ L L+ Y+ + DMY+K G D + +M E+ +++
Sbjct: 589 TVELGKQIHGQILKLQ-LHSDVYIASTIVDMYSKCGNMQDSR----IMFEKAPKRD 639
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 35/243 (14%)
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
+ S S +M K+T + + C+ L AI+ GK H + +G V + L+ Y
Sbjct: 25 IHSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYC 84
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMI-------------------------------SV 348
KC + A+ VF +MP++D ++W MI S
Sbjct: 85 KCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSC 144
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL-VE 407
+ NG+ +++ + F +M ++ ++ TF +L AC +G+ + G V + + +
Sbjct: 145 YLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKAC--TGIEDYGLGLQVHCLAIQMGFD 202
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY 467
V ++D+ S A + MP E + W A++ G + G K+ +
Sbjct: 203 SDVVTGTALVDMYSTCKKLDHAFNIFCEMP-ERNSVCWSAVIAGYVRNDRFTEGLKLYKV 261
Query: 468 LID 470
++D
Sbjct: 262 MLD 264
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 283/535 (52%), Gaps = 21/535 (3%)
Query: 30 ILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL--FFCALSVSGSLSYATNV 87
+L A+D ++R L+ +H +I+ P L +++RLL L YA +V
Sbjct: 39 LLLAAVDSSPSLRHLRHLHALLIRLP-LPPRSLPFILSRLLRRLAALPPPHAPLPYALSV 97
Query: 88 FSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKEC 147
F+ + D + ++R + H L+ ++L T + PF
Sbjct: 98 FAALSPPDPFLAAALLRFALLTQPPLSPFH------LFSRILRTARGGELPFLPFAFSPL 151
Query: 148 TKRLDGLVGASVY--GQVVKF---GVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
K V F G FV+NS+I ++ACG V +AR +FDEM +D
Sbjct: 152 AKSAAAARSLPAAQAAHAVSFLVGGFDKHRFVENSLIGAYIACGDVGAARKVFDEMVVKD 211
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
V+ W ++++ Y RS D+ A ++F + +++ +W +++TG+ Q +ALE+F M +
Sbjct: 212 VICWTSIVVAYSRSRDMGSAEEVFGQCPVKDMVAWTAMVTGYAQNAMPMKALEVFDRMTA 271
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
+ D++++ +SACA LGA+ WV +G +VV+G+ LVDMY KCG
Sbjct: 272 LGI----GIDEVSLTGAISACAQLGAVKRAAWVQEIAEMNGFGMNVVVGSGLVDMYAKCG 327
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLL 381
++ A VF M +K+ +++M+ A +G +EA F++M V PNHVTF+G+L
Sbjct: 328 LIDEACKVFDGMQEKNVYTYSSMVVGLASHGRAREAIALFKDMVRRADVAPNHVTFIGVL 387
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
+AC+H+G+V GR+ F M+ Y + P HY CM+D+L RAGL EA L+RSM +EP
Sbjct: 388 TACSHAGMVTDGRYYFAQMKDKYGILPSADHYTCMVDLLGRAGLVDEALDLVRSMTVEPH 447
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
VWGALLG C++HG E+ + A++L L+P YV L + A AG++D+V K R +
Sbjct: 448 GGVWGALLGACRIHGKTEVAKVAAEHLFKLEPEGIGNYVLLSNTLAAAGKWDEVSKVRKV 507
Query: 502 MKERGIRKEVPGCSSVE-VDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
M+ R ++K VP S E DG+VH+F + E+ L L +K+ G+
Sbjct: 508 MRSRRLKK-VPAVSWFEGRDGLVHQFFAGDNSHPRTREIKKALLELVAKLKHAGY 561
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 275/546 (50%), Gaps = 53/546 (9%)
Query: 10 YSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
+ LL +P+ ++ P + L++A +R +++H + +K P TN H ++T L
Sbjct: 62 HCLLPNPSHLTIP------IALKSASRLPHPLRAGEQLHARSLKLPS-HTNPH--VLTSL 112
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
L A G L A VF + + +I A H + +
Sbjct: 113 LSLYA--KCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVH------VARNAF 164
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
G+ PD T +L C + D G +V+ + GV VFV + + L++ CG +
Sbjct: 165 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 224
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
AR ++F +M+ ++ +W +++ G+ G
Sbjct: 225 KAR-------------------------------EVFDKMRHKDAVAWGAMVGGYASNGH 253
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
REAL+LF MQ+ E +KPD +A LSAC LGA+D G+ + + V
Sbjct: 254 PREALDLFLAMQA----EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 309
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+GTAL+DMY KCG A+ VF++M KKD + W AMI + G+ K AF +ME G
Sbjct: 310 LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSG 369
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
V+ N TF+GLL +C H+GL++ GR F M +Y + P + HY CM+D+LSRAGL EA
Sbjct: 370 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA 429
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
+L+ MPM + + GALLGGC++H N EL E V + LI L+P N YV L ++Y+
Sbjct: 430 HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNR 489
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
GR++D K R MK +G+ K VP CS VE +G VHEF + + +++ L+ L
Sbjct: 490 GRWEDAAKLRLDMKAKGVEK-VPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLE 548
Query: 550 MKNGGF 555
MK G+
Sbjct: 549 MKTMGY 554
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 174/521 (33%), Positives = 282/521 (54%), Gaps = 53/521 (10%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSG-SLSYATNVFSHIKRSDLYTY 99
+++L+++H +I + ++ SL+T+L+ L+ S +++Y +F + D + +
Sbjct: 22 VKQLQQVHAHLIVTSYGRSR---SLLTKLI---TLACSARAIAYTHLLFLSVPLPDDFLF 75
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
N +I++ + + C+ Y++ML + +SP TF ++K C +G V
Sbjct: 76 NSVIKSTSKLRLPLH------CVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGV 129
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDL 219
+ V G D +VQ ++++ + CG D+
Sbjct: 130 HCHAVVSGFGLDTYVQAALVTFYSKCG-------------------------------DM 158
Query: 220 DVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASV 279
+ A +F RM ++++ +WNS+++GF Q G A +A+ +F +M+ S E PD T S+
Sbjct: 159 EAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFE----PDSATFVSL 214
Query: 280 LSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDT 339
LSACA GAI G WVH Y+ GLD +V +GTAL+++Y +CG V +A VF +M + +
Sbjct: 215 LSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 340 LAWTAMISVFALNGYGKEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
AWTAMIS + +GYGK+A D F +ME + G PN+VTFV +LSACAH+GLVE GR +
Sbjct: 275 AAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYK 334
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF---VWGALLGGCQMH 455
M Y + P V H+ C++D+L RAG EA R I+ + + +W A+LG C+MH
Sbjct: 335 RMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMH 394
Query: 456 GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCS 515
N +LG ++A+ LI L+P N +V L ++YA +G+ D+V R+ M +RK+V G S
Sbjct: 395 RNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGKTDEVSHIRDRMMRNNLRKQV-GYS 453
Query: 516 SVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFG 556
+EV+ + FSM E+ L L K G+
Sbjct: 454 IIEVENKTYLFSMGDESHQETGEIYRYLETLISRCKEIGYA 494
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 206/310 (66%), Gaps = 5/310 (1%)
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G D A LF M R++ SWNS++ + Q G+ EAL LF +M++ V KP + T+
Sbjct: 162 GKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV----KPTEATV 217
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
S+LSACA+LGA+D G +H Y+ + ++ + ++GTALVDMY KCG + A VF M
Sbjct: 218 VSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMES 277
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD LAW +I+ A++G+ KEA F+EM+ GV PN +TFV +LSAC+H+G+V++G+
Sbjct: 278 KDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKL 337
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
M Y +EP V HY C+ID+L+RAGL EA LI +MPMEP+ GALLGGC++HG
Sbjct: 338 LDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHG 397
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
N ELGE V + LI+L P + Y+ L ++YA A ++DD +K RNLMK GI K VPG S
Sbjct: 398 NFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISK-VPGVSV 456
Query: 517 VEVDGVVHEF 526
+E+ G+VH F
Sbjct: 457 IELKGMVHRF 466
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 42/258 (16%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G A +FS + D+ ++N M+ A + + N+ L L+ QM G+ P
Sbjct: 162 GKRDDAFGLFSEMPCRDVVSWNSMLACYA-QCGKPNEA-----LALFDQMRAVGVKPTEA 215
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T LL C +GA G + + D+ NS++
Sbjct: 216 TVVSLLSACAH-----LGALDKGLHLHTYINDNRIEVNSIVG------------------ 252
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
A++ Y + G + +A +F M+ +++ +WN+II G G +EA LF+
Sbjct: 253 --------TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFK 304
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDM 317
EM+ + VE P+ IT ++LSAC++ G +D G+ + + S G++ V ++D+
Sbjct: 305 EMKEAGVE----PNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDL 360
Query: 318 YGKCGCVERAYGVFKEMP 335
+ G +E A + MP
Sbjct: 361 LARAGLLEEAMELIGTMP 378
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 275/546 (50%), Gaps = 53/546 (9%)
Query: 10 YSLLNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
+ LL +P+ ++ P + L++A +R +++H + +K P TN H ++T L
Sbjct: 541 HCLLPNPSHLTIP------IALKSASRLPHPLRAGEQLHARSLKLPS-HTNPH--VLTSL 591
Query: 70 LFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML 129
L A G L A VF + + +I A H + +
Sbjct: 592 LSLYA--KCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVH------VARNAF 643
Query: 130 CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
G+ PD T +L C + D G +V+ + GV VFV + + L++ CG +
Sbjct: 644 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 703
Query: 190 SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGR 249
AR +FD +M+ ++ +W +++ G+ G
Sbjct: 704 KAREVFD-------------------------------KMRHKDAVAWGAMVGGYASNGH 732
Query: 250 AREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVV 309
REAL+LF MQ+ E +KPD +A LSAC LGA+D G+ + + V
Sbjct: 733 PREALDLFLAMQA----EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 788
Query: 310 IGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG 369
+GTAL+DMY KCG A+ VF++M KKD + W AMI + G+ K AF +ME G
Sbjct: 789 LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSG 848
Query: 370 VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEA 429
V+ N TF+GLL +C H+GL++ GR F M +Y + P + HY CM+D+LSRAGL EA
Sbjct: 849 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA 908
Query: 430 ERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
+L+ MPM + + GALLGGC++H N EL E V + LI L+P N YV L ++Y+
Sbjct: 909 HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNR 968
Query: 490 GRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKI 549
GR++D K R MK +G+ K VP CS VE +G VHEF + + +++ L+ L
Sbjct: 969 GRWEDAAKLRLDMKAKGVEK-VPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLE 1027
Query: 550 MKNGGF 555
MK G+
Sbjct: 1028 MKTMGY 1033
>gi|293332303|ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea mays]
gi|238007354|gb|ACR34712.1| unknown [Zea mays]
Length = 464
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 261/473 (55%), Gaps = 29/473 (6%)
Query: 96 LYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKEC--TKRLD- 152
L + M RA+A + + L +++ M+ G+ PD + L C T L
Sbjct: 6 LVSRTAMARAHAASG------QAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPA 59
Query: 153 -GLVGAS-----VYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
G+ A V+ +V G+ DVFV +I ++ G + +R LFD M R VSW
Sbjct: 60 AGMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTVSW 119
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
NAM+ Y+R ++ A +LF M +R++ SWN++I G+ GR EALEL ++M S S
Sbjct: 120 NAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSC 179
Query: 267 EMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVER 326
V P+ T+++VL+ACA G ++ G WVH ++ R+ ++ D + +L+DMY KCG +E+
Sbjct: 180 P-VYPNGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEK 238
Query: 327 AYGVFKEMPK-KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
A VF++ P+ +D +WT MI A++G +A F M+ G+ P+ VT VG+L+ACA
Sbjct: 239 ALQVFEKAPEARDLYSWTTMICGLAMHGRAADALKMFGMMQDNGIHPDDVTLVGVLNACA 298
Query: 386 HSGLVEKGRWCFVMMRHVYLVE-----PHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
H GLV++G +RH Y +E P + HY C+ID+L R G EA +IR+M M+P
Sbjct: 299 HCGLVDEG------LRHFYSLEKYAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKP 352
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
+ +WGA L C++H NVELGE A L LDP + V L +YAK ++ + + R
Sbjct: 353 NAVIWGAFLNACKVHSNVELGEIAAAELTRLDPGDPWAKVMLSSLYAKLQDWNSLARERR 412
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNG 553
M I+K PGCSS+E+DG VHEF G E+ +L + G
Sbjct: 413 EMNNLQIKK-TPGCSSIELDGEVHEFVAGGFQHPQHGEICTVLENVEAQTHTG 464
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
MP ++ TAM A +G +A FR+M A+GV P++V L+AC + +
Sbjct: 1 MPDPGLVSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAA 60
Query: 394 RWCFVM----MRHVYLVE----PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
M H +V P V+ +I + G + + RL +MP+ V W
Sbjct: 61 GMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTV-SW 119
Query: 446 GALLGGCQMHGNV 458
A++ H NV
Sbjct: 120 NAMVHQYIRHSNV 132
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 180/506 (35%), Positives = 278/506 (54%), Gaps = 25/506 (4%)
Query: 23 NKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS 82
+K S L+L+ A +E ++H +IKS + + L C G L
Sbjct: 92 DKFSMSLVLK-ACSRLGFAKEGMQVHGFLIKSRTWSDLFLQNCLIGLYLKC-----GCLG 145
Query: 83 YATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
+A VF + + D +YN MI C E+ +G+ L + + +T+
Sbjct: 146 FARQVFDRMPQRDSVSYNSMIDGYVKCGLVES----AGELFDLMPRE-----KRNLITWN 196
Query: 142 FLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
++ +R DG+ V + ++ ++ + D+ NS+I ++ G + A+ LFD M
Sbjct: 197 SMIGGYAQRADGVNVASKLFDEMPE----KDLISWNSMIGGYVKHGRIEDAKGLFDVMPR 252
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
RDVV+W MI GY + G + A LF +M R++ ++NS+++GFVQ EALE+F M
Sbjct: 253 RDVVTWAIMIDGYGKLGLVHQAKTLFDQMPHRDVVAYNSMMSGFVQNRYHIEALEVFNHM 312
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
+ E + PD+ T+ VLSA A LG + +H Y+ +G AL+DMY K
Sbjct: 313 EK---ESHLSPDETTLVIVLSAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGVALIDMYSK 369
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG ++ A VF+ + K W AMI A++G G+ AFD ++E ++P+H+TFVG+
Sbjct: 370 CGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGV 429
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
L+AC+HSGLV++G CF +MR + +EP + HY CM+DIL+R+G A+ LI MP+EP
Sbjct: 430 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIELAKNLIEEMPIEP 489
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
+ +W L C H E GE VA++LI N + YV L +MYA G + DV++ R
Sbjct: 490 NDVIWRTFLNACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASNGMWKDVRRVRT 549
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEF 526
+MKE+ I K +PGCS +E+DG VHEF
Sbjct: 550 MMKEKKIEK-LPGCSWIELDGRVHEF 574
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 189/374 (50%), Gaps = 27/374 (7%)
Query: 106 NACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVK 165
NA S ++ K L L+ ML G+ D + +LK C++ G V+G ++K
Sbjct: 62 NAVIKSHSHGADPRKALLLFCLMLENGVLVDKFSMSLVLKACSRLGFAKEGMQVHGFLIK 121
Query: 166 FGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDL 225
D+F+QN +I L++ CG + AR +FD M RD VS+N+MI GY++ G ++ A +L
Sbjct: 122 SRTWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLVESAGEL 181
Query: 226 FRRM--KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
F M +KRN+ +WNS+I G+ Q RA + S +EM + D I+ S++
Sbjct: 182 FDLMPREKRNLITWNSMIGGYAQ--RADGV-----NVASKLFDEMPEKDLISWNSMIGGY 234
Query: 284 AYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWT 343
G I+ K + + R DVV ++D YGK G V +A +F +MP +D +A+
Sbjct: 235 VKHGRIEDAKGLFDVMPRR----DVVTWAIMIDGYGKLGLVHQAKTLFDQMPHRDVVAYN 290
Query: 344 AMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
+M+S F N Y EA + F ME E + P+ T V +LSA A G + K + H
Sbjct: 291 SMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTLVIVLSAIAQLGRLTKA-----IDMH 345
Query: 403 VYLVEPHVYHYA----CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+Y+VE +ID+ S+ G A R+ + + W A++GG +HG
Sbjct: 346 LYIVEKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIE-SKSIDHWNAMIGGLAVHG-- 402
Query: 459 ELGEKVAQYLIDLD 472
LGE L+ ++
Sbjct: 403 -LGESAFDMLLQIE 415
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 269/481 (55%), Gaps = 15/481 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDC 137
G + A ++F + + ++N MI + + K LKL+ +ML + ++PD
Sbjct: 244 GRMDLAESLFESMPDRSIVSWNAMI------AGYNQNGLDAKALKLFSRMLHESSMAPDE 297
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T +L C + +G V+ +++ + + V N++IS + G V +AR + D+
Sbjct: 298 FTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQ 357
Query: 198 MSNRD--VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D V+S+ A++ GY++ GD++ A ++F M R++ +W ++I G+ Q GR EA++
Sbjct: 358 SMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAID 417
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
LF+ M + E P+ T+A+VLS CA L +D+GK +H RS L+ + A++
Sbjct: 418 LFRSMITCGPE----PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAII 473
Query: 316 DMYGKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
MY + G A +F ++ +K+T+ WT+MI A +G G+EA F EM GV P+
Sbjct: 474 TMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDR 533
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+T+VG+LSAC+H+G V +G+ + +++ + + P + HYACM+D+L+RAGLFSEA+ IR
Sbjct: 534 ITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIR 593
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
MP+EPD WG+LL C++H N EL E A+ L+ +DP N Y + ++Y+ GR+ D
Sbjct: 594 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 653
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
+ KE+ +RKE G S + +H F ++ + + + + +K G
Sbjct: 654 AARIWKARKEKAVRKET-GFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAG 712
Query: 555 F 555
F
Sbjct: 713 F 713
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 215/478 (44%), Gaps = 71/478 (14%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMI----RANACKSSETNDTHSGKCLKLYKQMLCTGI 133
SG L+ A VF+ + D ++ +M+ RA G+ +K M G
Sbjct: 111 SGRLADARGVFAEMPERDAVSWTVMVVGLNRAG----------RFGEAIKTLLDMTADGF 160
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
+P T +L C G VG V+ VVK G+ V V NSV++++ CG +A
Sbjct: 161 TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATT 220
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
+F+ M R V SWNAM+ G +D+A LF M R+I SWN++I G+ Q G +A
Sbjct: 221 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKA 280
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL--------- 304
L+LF M E + PD+ TI SVLSACA LG + GK VH Y+ R+ +
Sbjct: 281 LKLFSRMLH---ESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNA 337
Query: 305 ------------------------DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
D +V+ TAL++ Y K G +E A +F M +D +
Sbjct: 338 LISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVV 397
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
AWTAMI + NG EA D FR M G PN T +LS CA ++ G+ +
Sbjct: 398 AWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ--IHC 455
Query: 401 RHVY-LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
R + L+E +I + +R+G F A R+ + + W +++ HG E
Sbjct: 456 RAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515
Query: 460 ----LGEKVAQYLIDLDPL---------NHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
L E++ + ++ D + +HA +VN Y +D +K + E
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRY-----YDQIKNEHQIAPE 568
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 171/365 (46%), Gaps = 47/365 (12%)
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM----ACGFVTSARMLF 195
+ LL+ C + G +++ + VK G+ ++ N+++S + G + AR LF
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 196 DE--MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
DE ++ R+V +WN+++ + +SG L A +F M +R+ SW ++ G + GR EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
++ +M + P + T+ +VLS+CA A G+ VH ++ + GL V + +
Sbjct: 149 IKTLLDMTADG----FTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANS 204
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
+++MYGKCG E A VF+ MP + +W AM+S+ G A F M +
Sbjct: 205 VLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI--- 261
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
V++ +++ +GL K LFS R++
Sbjct: 262 -VSWNAMIAGYNQNGLDAKA-----------------------------LKLFS---RML 288
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRF 492
M PD F ++L C GNV +G++V Y++ + ++ N L YAK+G
Sbjct: 289 HESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSV 348
Query: 493 DDVKK 497
++ ++
Sbjct: 349 ENARR 353
>gi|449434472|ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g51320-like [Cucumis sativus]
Length = 575
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 180/542 (33%), Positives = 293/542 (54%), Gaps = 46/542 (8%)
Query: 13 LNSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFF 72
++SP +PP + +L++ C+++REL + H +I S NDH R+L
Sbjct: 38 VHSPDTTNPPRHNQSHSLLQS----CQSVRELFQFHGHLITSGLF--NDHF-WANRVLL- 89
Query: 73 CALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTG 132
S G + Y +F HIK + + N +I+A + + + + +Y + L G
Sbjct: 90 -QASEFGDIVYTVLIFRHIKVPNTFCVNRVIKAYSLSTVPL------EAVFVYFEWLGNG 142
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+ PD TF L C G G +GQ K GV + + NS+I ++ C + R
Sbjct: 143 LRPDSYTFLSLFSACASFGCGASGRKCHGQAFKNGVDSVMVLGNSLIHMYGCCKHIELGR 202
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+FDEMS +D+VSWN+++ Y R GDL A D+F M +RN+ SWN +I+ +++GG
Sbjct: 203 KVFDEMSTQDLVSWNSIVTAYARVGDLYTAHDMFDVMPERNVVSWNLMISEYLRGGNPGC 262
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
A++LF+ M V ++ + T+ +VLSAC+ ++ G+ VHG++ R+ + V I T
Sbjct: 263 AMKLFRNM----VNVGIRGNNTTMVNVLSACSRSARLNEGRSVHGFMYRASMKFCVFINT 318
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM------- 365
ALVDMY KC V A VF + ++ + W AMI +L+G K+ + F EM
Sbjct: 319 ALVDMYSKCHRVSVARRVFDRLMIRNLVTWNAMILGHSLHGNPKDGLELFEEMVGELREI 378
Query: 366 -----------EAEGVR---PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY 411
+ EG R P+ +TF+G+L ACA +GL++ F M +V+LV P+
Sbjct: 379 NEETGNGKKFKQDEGKRKVFPDQITFIGVLCACARAGLLKDAENYFDEMINVFLVRPNFG 438
Query: 412 HYACMIDILSRAGLFSEAERLIRSMPMEPDVF-----VWGALLGGCQMHGNVELGEKVAQ 466
HY C+ ++ GL +A ++R+MP + + F VW LL C+ G+V LGE++A+
Sbjct: 439 HYWCLANVYVAVGLIEQAVEILRNMPEDNEDFSSESVVWIDLLTTCRFVGDVSLGEQIAK 498
Query: 467 YLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
YLID++P N ++Y L ++YA AGR++DV + + LMKE+ + + GC V++ +VH
Sbjct: 499 YLIDMEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRL-GTMSGCRLVDLKEIVHSL 557
Query: 527 SM 528
+
Sbjct: 558 KL 559
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 269/481 (55%), Gaps = 15/481 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDC 137
G + A ++F + + ++N MI + + K LKL+ +ML + ++PD
Sbjct: 138 GRMDLAESLFESMPDRSIVSWNAMI------AGYNQNGLDAKALKLFSRMLHESSMAPDE 191
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T +L C + +G V+ +++ + + V N++IS + G V +AR + D+
Sbjct: 192 FTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQ 251
Query: 198 MSNRD--VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D V+S+ A++ GY++ GD++ A ++F M R++ +W ++I G+ Q GR EA++
Sbjct: 252 SMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAID 311
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
LF+ M + E P+ T+A+VLS CA L +D+GK +H RS L+ + A++
Sbjct: 312 LFRSMITCGPE----PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAII 367
Query: 316 DMYGKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
MY + G A +F ++ +K+T+ WT+MI A +G G+EA F EM GV P+
Sbjct: 368 TMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDR 427
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+T+VG+LSAC+H+G V +G+ + +++ + + P + HYACM+D+L+RAGLFSEA+ IR
Sbjct: 428 ITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIR 487
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
MP+EPD WG+LL C++H N EL E A+ L+ +DP N Y + ++Y+ GR+ D
Sbjct: 488 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 547
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
+ KE+ +RKE G S + +H F ++ + + + + +K G
Sbjct: 548 AARIWKARKEKAVRKET-GFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAG 606
Query: 555 F 555
F
Sbjct: 607 F 607
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 215/473 (45%), Gaps = 61/473 (12%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMI----RANACKSSETNDTHSGKCLKLYKQMLCTGI 133
SG L+ A VF+ + D ++ +M+ RA G+ +K M G
Sbjct: 5 SGRLADARGVFAEMPERDAVSWTVMVVGLNRAG----------RFGEAIKTLLDMTADGF 54
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
+P T +L C G VG V+ VVK G+ V V NSV++++ CG +A
Sbjct: 55 TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATT 114
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
+F+ M R V SWNAM+ G +D+A LF M R+I SWN++I G+ Q G +A
Sbjct: 115 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKA 174
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL--------- 304
L+LF M E + PD+ TI SVLSACA LG + GK VH Y+ R+ +
Sbjct: 175 LKLFSRMLH---ESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNA 231
Query: 305 ------------------------DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
D +V+ TAL++ Y K G +E A +F M +D +
Sbjct: 232 LISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVV 291
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
AWTAMI + NG EA D FR M G PN T +LS CA ++ G+ +
Sbjct: 292 AWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ--IHC 349
Query: 401 RHVY-LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
R + L+E +I + +R+G F A R+ + + W +++ HG E
Sbjct: 350 RAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 409
Query: 460 ----LGEKVAQYLIDLDPLNHAFYVNLCDM--YAKAGR--FDDVKKTRNLMKE 504
L E++ + ++ D + + ++ C + G+ +D +K + E
Sbjct: 410 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPE 462
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 129/286 (45%), Gaps = 41/286 (14%)
Query: 213 YLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPD 272
+ +SG L A +F M +R+ SW ++ G + GR EA++ +M + P
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADG----FTPT 57
Query: 273 KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFK 332
+ T+ +VLS+CA A G+ VH ++ + GL V + ++++MYGKCG E A VF+
Sbjct: 58 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFE 117
Query: 333 EMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEK 392
MP + +W AM+S+ G A F M + V++ +++ +GL K
Sbjct: 118 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI----VSWNAMIAGYNQNGLDAK 173
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
LFS R++ M PD F ++L C
Sbjct: 174 A-----------------------------LKLFS---RMLHESSMAPDEFTITSVLSAC 201
Query: 453 QMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKK 497
GNV +G++V Y++ + ++ N L YAK+G ++ ++
Sbjct: 202 ANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARR 247
>gi|115484703|ref|NP_001067495.1| Os11g0213500 [Oryza sativa Japonica Group]
gi|77549336|gb|ABA92133.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644717|dbj|BAF27858.1| Os11g0213500 [Oryza sativa Japonica Group]
gi|125576589|gb|EAZ17811.1| hypothetical protein OsJ_33354 [Oryza sativa Japonica Group]
Length = 470
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 251/459 (54%), Gaps = 45/459 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G A VF ++ ++ YN+++ A+ + + ++++ ++L +G+ PD
Sbjct: 55 GERRRARRVFDGMRAPSMHAYNVLLAASPPRDA----------MEVFSRLLASGLRPDGY 104
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+ P +++ C + D ++G ++G V+ G+ +V V +++ ++ GF+ A +FDEM
Sbjct: 105 SVPAVVRACAELPDAVLGGVIHGFAVRLGLMGNVVVAAALLDMYAKAGFLDDAVRVFDEM 164
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+ RD V WN M+ GY R+ GRA E E+F
Sbjct: 165 TERDAVVWNCMVAGYARA-------------------------------GRAVETFEIFS 193
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDM 317
Q +V MV + + SVL+ CA G + G+ +HG + R D D+ +G AL++M
Sbjct: 194 RAQVEAV-NMVNGLQ-AVPSVLNICAKEGELMKGREIHGRMVRCLAFDSDIAVGNALINM 251
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG V + VF M ++D ++W+ MI ++++G G++A + EM +EGV+PN +TF
Sbjct: 252 YAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSYSIHGKGEQALKVYMEMLSEGVKPNWITF 311
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+LS+C+HSGLV +GR F M V+ V P HYACM+D+L RAG EA LIR MP
Sbjct: 312 TSVLSSCSHSGLVTEGRKIFESMTKVHGVHPAAEHYACMVDLLGRAGAIEEAVGLIRKMP 371
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
MEP VWGALL C MH NV++GE A L +L+ + + YV LC +Y G+ D V
Sbjct: 372 MEPCASVWGALLSACAMHNNVDVGEIAAFRLFELEEGSASNYVTLCGIYDAVGQSDGVAG 431
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVK 536
R+ M+E G+ K PGCS ++V G H F P+ ++
Sbjct: 432 LRSRMRELGMVK-TPGCSRIDVKGRAHAFYQGSIPRYLR 469
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 18/190 (9%)
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
M P ++ +L CA GA+ G+ H G D + T LV MY +CG RA
Sbjct: 1 MAAPVAGRLSGLLRRCAAAGAVRPGEQAHARAVVGGWLPDATLETDLVLMYCRCGERRRA 60
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAH- 386
VF M A+ +++ ++A + F + A G+RP+ + ++ ACA
Sbjct: 61 RRVFDGMRAPSMHAYNVLLAASP----PRDAMEVFSRLLASGLRPDGYSVPAVVRACAEL 116
Query: 387 -----SGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
G++ +M +V + A ++D+ ++AG +A R+ M E D
Sbjct: 117 PDAVLGGVIHGFAVRLGLMGNVVVA-------AALLDMYAKAGFLDDAVRVFDEM-TERD 168
Query: 442 VFVWGALLGG 451
VW ++ G
Sbjct: 169 AVVWNCMVAG 178
>gi|242042383|ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
gi|241922440|gb|EER95584.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
Length = 581
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 184/518 (35%), Positives = 288/518 (55%), Gaps = 23/518 (4%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTY 99
++ EL++ H+Q+I+ L H + RLL F A YA+ + +H +
Sbjct: 22 SIAELRQHHSQLIR---LGVASHPAHARRLLSFLARDPDSHFPYASRLLAHHPAPHPALF 78
Query: 100 NIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASV 159
N + A + + +L ML + PD TFP +L LV A +
Sbjct: 79 NPLFSALPTRHAA----------RLLALMLSLPLHPDHFTFPRILPGAQPL--HLV-AQL 125
Query: 160 YGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR--DVVSWNAMIIGYLRSG 217
+ ++K G N++++ ++A A +F DVVSW M+ G ++ G
Sbjct: 126 HALLLKLGFHAHTQSLNALLAAYLANARPDLASRVFRGGGGDALDVVSWTTMVGGLVKLG 185
Query: 218 DLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIA 277
+D A +LF M +RN+ SWN++++G+V+ GR +ALE+F EM++ V+ + A
Sbjct: 186 RVDDARELFDGMPERNLVSWNAMMSGYVKTGRFLDALEVFDEMRARGVDG----NAFVAA 241
Query: 278 SVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKK 337
+ + AC GA+ G+ VH ++ RSG++ D + TA+VDMY KCGCVE A+ VF+ +P +
Sbjct: 242 TAVVACTGAGALARGREVHRWVERSGIEMDDKLATAVVDMYCKCGCVEEAWRVFEALPAR 301
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+W MI FA++G G++A + F ME EGV P+ VT V +L+ACAH+G+V +GR F
Sbjct: 302 GLTSWNCMIGGFAVHGRGEDALNLFGLMEREGVAPDDVTLVNVLTACAHAGMVSEGRHYF 361
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+ Y + P + HY CM+D+ RAG EA+++I+ MPMEPDV V GAL G ++HG+
Sbjct: 362 NYISQRYGIVPKMEHYGCMVDLYGRAGQLEEAKKVIQDMPMEPDVGVLGALFGASKIHGD 421
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
V+LGE + +I+LDP N YV L ++ A AGR++DV + R LM ER + KE G S +
Sbjct: 422 VDLGEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEA-GRSVI 480
Query: 518 EVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
EV G V EF G EE+ + + + ++ G+
Sbjct: 481 EVQGEVCEFQCGGLCHPQAEEVYAMARDMMRKIRAEGY 518
>gi|345505212|gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica oleracea]
Length = 590
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 277/508 (54%), Gaps = 25/508 (4%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
P +K S L L+ A ++E ++H +IK+ + + L C G
Sbjct: 103 PVDKFSLSLALK-ACSRLGFVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKC-----GF 156
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
L +A VF + D +YN MI C E+ +G+ L + + +T
Sbjct: 157 LGFARQVFDRMPERDSVSYNSMIDGYVKCGLVES----AGELFDLMPRE-----KRNLIT 207
Query: 140 FPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+ ++ +R DG+ V ++ ++ + D+ NS+I ++ G + A+ LF+ M
Sbjct: 208 WNSMIGGYAQRADGVDVAEKLFDEMPE----KDLISWNSMIGGYVKHGRIEDAKGLFNVM 263
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
RDVV+W MI GY + G + VA LF +M R++ ++NS+++G+VQ EALE+F
Sbjct: 264 PRRDVVTWAIMIDGYGKLGLVHVAKTLFDQMPHRDVVAYNSMMSGYVQNRYHMEALEVFN 323
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M+ E + PD+ ++ VLSA A LG + +H Y+ +G AL+DMY
Sbjct: 324 HMEK---ESHLTPDETSLVIVLSAIAQLGRLSKAIDMHLYIVEKQFPLSGKLGVALIDMY 380
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG ++ A VF+ + K W AMI A++G G+ AFD ++E ++P+H+TFV
Sbjct: 381 SKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLFQIERRSIKPDHITFV 440
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L+AC+HSGLV++G CF +MR + +EP + HY CM+DIL+R+G A LI MP+
Sbjct: 441 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIKLARNLIEGMPI 500
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EP+ +W L C H E GE VA++LI N + YV L +MYA G + DV++
Sbjct: 501 EPNDVIWRTFLTACSHHKEFETGELVAKHLILXGGYNPSSYVLLSNMYASNGMWKDVRRV 560
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R +MKE+ I K +PGCS +E+DG VHEF
Sbjct: 561 RTMMKEKNIEK-IPGCSWIELDGRVHEF 587
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 226/459 (49%), Gaps = 53/459 (11%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS-----LSYATNVF- 88
+ CK +L ++H ++I + ++ D L TR++ A + + S +A VF
Sbjct: 2 LGSCKTSHDLNKLHARLITTGLIKNPD---LTTRIVLAFASASASSRRPFLAEFARCVFH 58
Query: 89 -SHIKRS----DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
H+ S D + +N++I+ S ++ K L L ML + + D +
Sbjct: 59 EHHVSSSGEVEDPFLWNVVIK------SHSHGVDPRKALFLLCLMLESSVPVDKFSLSLA 112
Query: 144 LKECTKRLDGLV--GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
LK C++ G V G V+G ++K G D+F+QN +I L++ CGF+ AR +FD M R
Sbjct: 113 LKACSRL--GFVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPER 170
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRM--KKRNIFSWNSIITGFVQGGRAREALE-LFQ 258
D VS+N+MI GY++ G ++ A +LF M +KRN+ +WNS+I G+ Q + E LF
Sbjct: 171 DSVSYNSMIDGYVKCGLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVDVAEKLF- 229
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
+EM + D I+ S++ G I+ K + + R DVV ++D Y
Sbjct: 230 -------DEMPEKDLISWNSMIGGYVKHGRIEDAKGLFNVMPRR----DVVTWAIMIDGY 278
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTF 377
GK G V A +F +MP +D +A+ +M+S + N Y EA + F ME E + P+ +
Sbjct: 279 GKLGLVHVAKTLFDQMPHRDVVAYNSMMSGYVQNRYHMEALEVFNHMEKESHLTPDETSL 338
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA----CMIDILSRAGLFSEAERLI 433
V +LSA A G + K + H+Y+VE +ID+ S+ G A R+
Sbjct: 339 VIVLSAIAQLGRLSKA-----IDMHLYIVEKQFPLSGKLGVALIDMYSKCGSIQHAMRVF 393
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
+ + W A++GG +HG LGE L ++
Sbjct: 394 EGIE-SKSIDHWNAMIGGLAVHG---LGESAFDMLFQIE 428
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 45/273 (16%)
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
F WN +I G R+AL L M SSV DK +++ L AC+ LG + G
Sbjct: 72 FLWNVVIKSHSHGVDPRKALFLLCLMLESSV----PVDKFSLSLALKACSRLGFVKEGTQ 127
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
VHG+L ++G D+ + L+ +Y KCG + A VF MP++D++++ +MI + G
Sbjct: 128 VHGFLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPERDSVSYNSMIDGYVKCGL 187
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
+ A + F M E + N +T+ ++ A
Sbjct: 188 VESAGELFDLMPRE--KRNLITWNSMIGGYA----------------------------- 216
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
RA AE+L MP E D+ W +++GG HG +E + + + D +
Sbjct: 217 ------QRADGVDVAEKLFDEMP-EKDLISWNSMIGGYVKHGRIEDAKGLFNVMPRRDVV 269
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
A + D Y K G K + M R +
Sbjct: 270 TWAIMI---DGYGKLGLVHVAKTLFDQMPHRDV 299
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 244/438 (55%), Gaps = 42/438 (9%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
+ YA VF I+ D + +N MIR K + YK+M G D T+
Sbjct: 1 MDYALRVFGKIENPDGFLWNTMIRGLG------RTRQPEKAFEFYKRMQVKGEVLDNFTY 54
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
FL+K C + L+G ++ V+K G+ + VFV+N+++ ++
Sbjct: 55 SFLVKVCGQLGSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMY------------------ 96
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
G + D++ A LF M K + +WN+II V GR +EA+ELF M
Sbjct: 97 -----------GMFK--DIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRM 143
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
S + KPD T LSACA LG +D G+ VH + +GL V + +L+DMY K
Sbjct: 144 LQSGL----KPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAK 199
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVG 379
CG VE AY +F +M ++ ++W MI A++G+G EA + F +M E + PN VTF+G
Sbjct: 200 CGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLG 259
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
+L AC+H G+VE+GR F +MR Y ++P + HY M+DIL RAGL EA RLI+SMP+E
Sbjct: 260 VLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIE 319
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
+ VW LL C++HGN+EL E+V Q L++L+P + + YV L +MYA AG+++ V + R
Sbjct: 320 SNSIVWRTLLAACRVHGNLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWNKVVRVR 379
Query: 500 NLMKERGIRKEVPGCSSV 517
M RG++K PG S +
Sbjct: 380 KSMHIRGVQKPKPGNSYI 397
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 162/354 (45%), Gaps = 55/354 (15%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
K+IH ++K + H + L + + AT++F + +S L +N +I
Sbjct: 71 KQIHCNVLKHGL----EEHVFVRNTLVH-MYGMFKDIEAATHLFEEMPKSYLVAWNTIID 125
Query: 105 ANA-CKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQV 163
N C + + ++L+ +ML +G+ PD TF L C + +G V+ +
Sbjct: 126 CNVYCGRYK-------EAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCI 178
Query: 164 VKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
G+ + V V NS+I ++ CG V +A +F++M R++VSWN MI+G G D AL
Sbjct: 179 DHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEAL 238
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
+LF +M + E++ P+++T VL AC
Sbjct: 239 ELFSKMLE----------------------------------EKLATPNEVTFLGVLCAC 264
Query: 284 AYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLA 341
++ G ++ G+ +RR + + ++VD+ G+ G VE AY + K MP + +++
Sbjct: 265 SHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIV 324
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
W +++ ++G E + R+ E + P+H + LL+ S G+W
Sbjct: 325 WRTLLAACRVHG-NLELAEQVRQQLLE-LEPDHSSDYVLLANMYASA----GQW 372
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 289/541 (53%), Gaps = 51/541 (9%)
Query: 18 KVSPPNKESTKLILRNAIDECKN---MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCA 74
++ ++ ++ + N + C + +R LKE+H + C Q H L F A
Sbjct: 341 QIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRH-CFQ---HVELSNA--FILA 394
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGIS 134
+ G+L+ A VF I + ++N +I +A + D K L L QM +G
Sbjct: 395 YAKCGALNSAEKVFHGIGDKTVSSWNALIGGHA----QNGDPR--KALHLLFQMTYSGQQ 448
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
PD T LL C G ++G V++ G+ D FV S++S ++ CG +SAR+L
Sbjct: 449 PDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVL 508
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD RMK +N+ SWN++I+G+ Q G E+L
Sbjct: 509 FD-------------------------------RMKDKNLVSWNAMISGYSQNGLPYESL 537
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
LF++ S+ E ++ +I I SV AC+ L A+ GK HGY+ ++ D +G ++
Sbjct: 538 ALFRK----SLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSI 593
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
+DMY K GC++ + VF + K+ +W A+I ++G+GKEA + + M+ G P+
Sbjct: 594 IDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDR 653
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
T++G+L AC H+GLVE+G F M++ L+EP + HYAC+ID+L+RAG +A RL+
Sbjct: 654 FTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVN 713
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
MP E D +W +LL C+ G +E+GEKVA+ L++L+P YV L ++YA G++D
Sbjct: 714 EMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDG 773
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
V++ R +MKE G++K+ GCS +EV G V+ F + S + E+ +I L + + G
Sbjct: 774 VRRVRQMMKEIGLQKD-AGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIG 832
Query: 555 F 555
+
Sbjct: 833 Y 833
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 216/455 (47%), Gaps = 67/455 (14%)
Query: 14 NSPAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFC 73
+ A +S KE+ L+L+ A K++ + +H + S + + L TRL+
Sbjct: 33 QNAAFISLQAKEAIGLLLQ-ACGNQKDIETGRRLHKFV--SDSTHYRNDYVLNTRLIKMY 89
Query: 74 ALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TG 132
A+ GS + VF +++ +L +N ++ S T + G +K++ ++ T
Sbjct: 90 AMC--GSPLDSRLVFDNMETKNLIQWNALV------SGYTRNGLYGDVVKVFMDLVSDTD 141
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
PD TFP ++K C LD +G ++G V+K G+ DVFV N+++ ++ CG V
Sbjct: 142 FQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAV---- 197
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
D A+ +F M + N+ SWNS+I F + G +R+
Sbjct: 198 ---------------------------DEAMKVFDFMPETNLVSWNSMICAFSENGFSRD 230
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
+ +L EM EE + PD +T+ ++L CA G +D G +HG + GL +V++
Sbjct: 231 SFDLLMEMLG---EEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNN 287
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG--V 370
A+V MY KCG + A F + K+ ++W MIS F+L G EAF+ +EM+ +G +
Sbjct: 288 AMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEM 347
Query: 371 RPNHVTFVGLLSACAHS----GLVE----KGRWCFVMMRHVYLVEPHVYHYACMIDILSR 422
+ N VT + +L AC L E R CF +HV L + YA +
Sbjct: 348 KANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF---QHVELSNAFILAYA-------K 397
Query: 423 AGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
G + AE++ + + V W AL+GG +G+
Sbjct: 398 CGALNSAEKVFHGIG-DKTVSSWNALIGGHAQNGD 431
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 203/464 (43%), Gaps = 75/464 (16%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT-GISPDC 137
G++ A VF + ++L ++N MI C SE + S L +ML G+ PD
Sbjct: 195 GAVDEAMKVFDFMPETNLVSWNSMI----CAFSE--NGFSRDSFDLLMEMLGEEGLLPDV 248
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+T +L C + +G ++G VK G+ ++V V N+++ ++ CG++ A+M F +
Sbjct: 249 VTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVK 308
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+N++VVSWN MI + GD++ EA L
Sbjct: 309 NNNKNVVSWNTMISAFSLEGDVN-------------------------------EAFNLL 337
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
QEMQ EEM K +++TI +VL AC + K +HGY R V + A +
Sbjct: 338 QEMQIQG-EEM-KANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILA 394
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG + A VF + K +W A+I A NG ++A +M G +P+ T
Sbjct: 395 YAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTI 454
Query: 378 VGLLSACAHSGLVEKGRWC-------------FV---MMRHVY--------------LVE 407
LL ACAH ++ G+ FV ++ H + +
Sbjct: 455 SSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKD 514
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIR---SMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
++ + MI S+ GL E+ L R S ++ ++ G C + LG++
Sbjct: 515 KNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEA 574
Query: 465 AQYLIDLDPLNHAFY-VNLCDMYAKAGRFDDVKKTRNLMKERGI 507
Y++ AF ++ DMYAK+G + +K + +K++ +
Sbjct: 575 HGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNV 618
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 131/236 (55%), Gaps = 8/236 (3%)
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
+F M+ +N+ WN++++G+ + G + +++F ++ S + +PD T SV+ AC
Sbjct: 101 VFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTD---FQPDNFTFPSVIKACG 157
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
+ + G+ +HG + + GL DV +G ALV MYGKCG V+ A VF MP+ + ++W +
Sbjct: 158 GILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNS 217
Query: 345 MISVFALNGYGKEAFDTFREMEA-EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV 403
MI F+ NG+ +++FD EM EG+ P+ VT V +L CA G V+ G + +
Sbjct: 218 MICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKL 277
Query: 404 YLVEPHVYHYACMIDILSRAGLFSEAE-RLIRSMPMEPDVFVWGALLGGCQMHGNV 458
L E + + A M+ + S+ G +EA+ +++ +V W ++ + G+V
Sbjct: 278 GLSEEVMVNNA-MVYMYSKCGYLNEAQMSFVKN--NNKNVVSWNTMISAFSLEGDV 330
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 270/542 (49%), Gaps = 55/542 (10%)
Query: 25 ESTKLILRNAIDECKNMREL---KEIHTQIIKSPC-LQTNDHHSLITRLLFFCALSVSGS 80
E K+ + + CKN L ++IH II+S L N ++LI + C GS
Sbjct: 584 EPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALIN-MYIRC-----GS 637
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
L A VF ++ ++ ++ MI A + + K +L+ QM G P TF
Sbjct: 638 LQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDR------KAFELFWQMQNDGFKPVKSTF 691
Query: 141 PFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSN 200
+LK C G V ++ G D V N++IS
Sbjct: 692 SSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALIS-------------------- 731
Query: 201 RDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEM 260
Y +SG + A +F +M R+I SWN +I G+ Q G AL+ +M
Sbjct: 732 -----------AYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQM 780
Query: 261 QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGK 320
Q E+ V +K + S+L+AC+ A++ GK VH + + + DV +G AL+ MY K
Sbjct: 781 Q----EQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAK 836
Query: 321 CGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGL 380
CG +E A VF +K+ + W AMI+ +A +G +A D F M+ EG++P+ TF +
Sbjct: 837 CGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSI 896
Query: 381 LSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP 440
LSAC HSGLV +G F + + + P + HY C++ +L RAG F EAE LI MP P
Sbjct: 897 LSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPP 956
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
D VW LLG C++HGNV L E A + L+ N A YV L ++YA AGR+DDV K R
Sbjct: 957 DAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRR 1016
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFG---Q 557
+M+ RGIRKE PG S +EVD ++HEF E+ L LS M+ G+ Q
Sbjct: 1017 VMEGRGIRKE-PGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQ 1075
Query: 558 YI 559
Y+
Sbjct: 1076 YV 1077
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 215/438 (49%), Gaps = 52/438 (11%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A +F+ + + DL ++N +I A + G+ +KLYKQM G+ P +
Sbjct: 434 GDLPRARELFNTMPKRDLISWNAIIAGYARREDR------GEAMKLYKQMQSEGVKPGRV 487
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TF LL CT G ++ +++ G+ + + N++++++ CG + A+
Sbjct: 488 TFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQ------ 541
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
++F + R+I SWNS+I G Q G A +LF
Sbjct: 542 -------------------------NVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFL 576
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM+ +E ++PDKIT ASVL C A++ G+ +H + SGL DV +G AL++MY
Sbjct: 577 EMK----KEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMY 632
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
+CG ++ AY VF + ++ ++WTAMI FA G ++AF+ F +M+ +G +P TF
Sbjct: 633 IRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFS 692
Query: 379 GLLSACAHSGLVEKGRWCFV-MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
+L AC S +++G+ ++ Y ++ V + +I S++G ++A ++ MP
Sbjct: 693 SILKACMSSACLDEGKKVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMP 750
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP----LNHAFYVNLCDMYAKAGRFD 493
D+ W ++ G +G LG Q+ + LN +V++ + + +
Sbjct: 751 -NRDIMSWNKMIAGYAQNG---LGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALE 806
Query: 494 DVKKTRNLMKERGIRKEV 511
+ K+ + +R ++ +V
Sbjct: 807 EGKRVHAEIVKRKMQGDV 824
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 220/497 (44%), Gaps = 80/497 (16%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
K+IH++II++ + + + + C L A VFS I R D+ +YN M+
Sbjct: 203 KKIHSKIIEAGYQRDPRVQNSLLNMYGKCE-----DLPSARQVFSGIYRRDVVSYNTMLG 257
Query: 105 ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVV 164
A K+ + +C+ L+ QM GI PD +T+ LL T G ++ V
Sbjct: 258 LYAQKA------YVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAV 311
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
G+ D+ V ++ ++F+ CG V A+ + ++RD
Sbjct: 312 NEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRD---------------------- 349
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
+ +N++I Q G EA E + +M+S V ++ T SVL+AC+
Sbjct: 350 ---------VVVYNALIAALAQHGHYEEAFEQYYQMRSDGV----VMNRTTYLSVLNACS 396
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
A+ G+ +H ++ G DV IG +L+ MY +CG + RA +F MPK+D ++W A
Sbjct: 397 TSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNA 456
Query: 345 MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG----------- 393
+I+ +A EA +++M++EGV+P VTF+ LLSAC +S G
Sbjct: 457 IIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSG 516
Query: 394 ---------------RWCFVMMRHVYLVE----PHVYHYACMIDILSRAGLFSEAERLIR 434
R C +M + E + + MI ++ G + A +L
Sbjct: 517 IKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFL 576
Query: 435 SMP---MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD-PLNHAFYVNLCDMYAKAG 490
M +EPD + ++L GC+ +ELG ++ +I+ L+ L +MY + G
Sbjct: 577 EMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCG 636
Query: 491 RFDDVKKTRNLMKERGI 507
D + + ++ R +
Sbjct: 637 SLQDAYEVFHSLRHRNV 653
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 161/325 (49%), Gaps = 39/325 (12%)
Query: 143 LLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
L++ CT++ ++ Q+V+ GV D+F+ N +I++++ C V+ A +F +M RD
Sbjct: 88 LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
V+SWN++I + + Q G ++A +LF+EMQ+
Sbjct: 148 VISWNSLI-------------------------------SCYAQQGFKKKAFQLFEEMQT 176
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
+ P KIT S+L+AC +++GK +H + +G D + +L++MYGKC
Sbjct: 177 AG----FIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCE 232
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
+ A VF + ++D +++ M+ ++A Y +E F +M +EG+ P+ VT++ LL
Sbjct: 233 DLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLD 292
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
A ++++G+ + + L + + + R G + A++ + + + DV
Sbjct: 293 AFTTPSMLDEGKRIHKLAVNEGL-NSDIRVGTALATMFVRCGDVAGAKQALEAFA-DRDV 350
Query: 443 FVWGALLGGCQMHGNVELGEKVAQY 467
V+ AL+ HG+ E E QY
Sbjct: 351 VVYNALIAALAQHGHYE--EAFEQY 373
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 116/254 (45%), Gaps = 23/254 (9%)
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
+ ++ ++ C ++ K +H + +G+ D+ + L++MY KC V A+
Sbjct: 78 TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
VF +MP++D ++W ++IS +A G+ K+AF F EM+ G P+ +T++ +L+AC
Sbjct: 138 QVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPA 197
Query: 389 LVEKGRWCFV-MMRHVYLVEPHVYH-----YACMIDILSRAGLFSEAERLIRSMPMEPDV 442
+E G+ ++ Y +P V + Y D+ S +FS R DV
Sbjct: 198 ELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRR--------DV 249
Query: 443 FVWGALLGGCQMHGNVE-----LGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+ +LG VE G+ ++ + P + Y+NL D + D+ K+
Sbjct: 250 VSYNTMLGLYAQKAYVEECIGLFGQMSSEGI----PPDKVTYINLLDAFTTPSMLDEGKR 305
Query: 498 TRNLMKERGIRKEV 511
L G+ ++
Sbjct: 306 IHKLAVNEGLNSDI 319
>gi|357469567|ref|XP_003605068.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506123|gb|AES87265.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 494
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 273/479 (56%), Gaps = 40/479 (8%)
Query: 44 LKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMI 103
L+++H+QII S H+ +T LL F L S SLS +F H + +T+ +
Sbjct: 51 LQQLHSQIITSSLFHHYPFHNNLTSLLLFNNLIRSYSLS----LFPH-ESLKFFTHTL-- 103
Query: 104 RANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQV 163
N THS +S D T FL C G ++ V
Sbjct: 104 ---------NNLTHS--------------LSLDSFTLTFLAHACANLDTTHFGFHLHCIV 140
Query: 164 VKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVAL 223
K G + VFVQ ++ ++ GF+ A +F EM +R+ V+WN I G ++ G L+ A
Sbjct: 141 CKMGFENHVFVQTGLLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFAR 200
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
+F RM R++ SW +I G+ + + +AL LF++M + ++P+++T+ +V A
Sbjct: 201 SVFDRMVVRSVVSWTLVIDGYTRMNKPLKALALFRKMIEV---DGIEPNEVTLLTVFPAI 257
Query: 284 AYLGAIDHGKWVHGYLRRSGLDC-DVVIGTALVDMYGKCGCVERAYGVFKEMP--KKDTL 340
A+LG + + VHGY+ + G + D+ I AL+D+Y KCGC+E A G+F EMP +++++
Sbjct: 258 AHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSV 317
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
+W +++S +A G +EA DTF +ME GVRPNHV F+ +LSAC+HSGLVE+G F M
Sbjct: 318 SWNSVMSGYATFGMVREAVDTFEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKM 377
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEP--DVFVWGALLGGCQMHGNV 458
+ Y + P + HY C+ID+L RAG EAE++ +P E DV +W LLG C +H NV
Sbjct: 378 VNDYGLVPDIKHYGCVIDMLGRAGRLGEAEKVALEVPHEAANDV-IWRTLLGACSVHDNV 436
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
E+G++V + +++++ + YV + +++A GRF DV++ R ++ +R + K +PG S V
Sbjct: 437 EIGKRVTKKILEMEKGHGGDYVLMSNIFASVGRFKDVERLREMIDKRNVFK-LPGYSIV 494
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 257/453 (56%), Gaps = 18/453 (3%)
Query: 67 TRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA---------NACKSSETNDTH 117
TRL S +++ T V H K +L T + NA S
Sbjct: 185 TRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQSGA 244
Query: 118 SGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNS 177
+ + ++L+ ML +G PD T+ +L C+ D + S+ ++ + + FV+ +
Sbjct: 245 AQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNYFVKTA 304
Query: 178 VISLFMACGFVTSARMLFDEMS-NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFS 236
++ + CG + A+ +F+++ ++ V+WNAMI Y R GDL +A DLF +M +RN S
Sbjct: 305 LLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLSLARDLFNKMPERNTVS 364
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
WNS+I G+ Q G + +A++LF+EM SS KPD++T+ SV SAC +LG + G W
Sbjct: 365 WNSMIAGYAQNGESLKAIQLFKEMISSKDS---KPDEVTMVSVFSACGHLGRLGLGNWAV 421
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
L + + + +L+ MY +CG +E A F+EM KD +++ +IS A +G+G
Sbjct: 422 SILHENHIKLSISGYNSLIFMYLRCGSMEDARITFQEMATKDLVSYNTLISGLAAHGHGT 481
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
E+ +M+ +G+ P+ +T++G+L+AC+H+GL+E+G F ++ P V HYACM
Sbjct: 482 ESIKLMSKMKEDGIGPDRITYIGVLTACSHAGLLEEGWKVFESIK-----VPDVDHYACM 536
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
ID+L R G EA +LI+SMPMEP ++G+LL +H VELGE A L ++P N
Sbjct: 537 IDMLGRVGKLEEAVKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNS 596
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
YV L ++YA AGR+ DV K R+ M+++G++K
Sbjct: 597 GNYVLLSNIYALAGRWKDVDKVRDKMRKQGVKK 629
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 223/506 (44%), Gaps = 94/506 (18%)
Query: 19 VSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVS 78
+SP NK +N + N+ L+++H Q++ L + HH+ LL +
Sbjct: 1 MSPLNK-------KNIASKITNLHHLRQLHAQLV----LHSQHHHNHWVALLLTQCTHLL 49
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQM-LCTGISPDC 137
+Y +++F +++ + M++ + + T + L+K M I P
Sbjct: 50 APSNYTSHIFRAATYPNVHVFTCMLKYYSQIGATTQ-----VVVSLFKHMQYYNDIKPYT 104
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+P L+K G G ++ ++K G D V+N+++ ++ G + AR LFDE
Sbjct: 105 SFYPVLIKSA-----GKAGMLLHAYLLKLGHSHDHHVRNAIMGIYAKYGCIELARKLFDE 159
Query: 198 MSNRDVVSWNAMIIGYLRSG---------------------------------DLDVALD 224
M +R WN +I GY + G +L+ A
Sbjct: 160 MPDRTAADWNVIISGYWKCGNEKEATRLFCMMGESEKNVITWTTMVTGHAKMRNLETARM 219
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
F M +R + SWN++++G+ Q G A+E + LF +M SS E PD+ T +VLS+C+
Sbjct: 220 YFDEMPERRVASWNAMLSGYAQSGAAQETVRLFDDMLSSGNE----PDETTWVTVLSSCS 275
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE----------- 333
LG + + L R + + TAL+DM+ KCG +E A +F++
Sbjct: 276 SLGDPCLAESIVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWN 335
Query: 334 ---------------------MPKKDTLAWTAMISVFALNGYGKEAFDTFREM-EAEGVR 371
MP+++T++W +MI+ +A NG +A F+EM ++ +
Sbjct: 336 AMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSK 395
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
P+ VT V + SAC H G + G W V + H ++ + Y +I + R G +A
Sbjct: 396 PDEVTMVSVFSACGHLGRLGLGNWA-VSILHENHIKLSISGYNSLIFMYLRCGSMEDARI 454
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGN 457
+ M + D+ + L+ G HG+
Sbjct: 455 TFQEMATK-DLVSYNTLISGLAAHGH 479
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/600 (32%), Positives = 304/600 (50%), Gaps = 90/600 (15%)
Query: 30 ILRNAIDECKNMREL---KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATN 86
+ R + EC +R L +E+H I+KS +Q N + L LL A GSL+ A
Sbjct: 49 VFRGLLQECARLRSLEQGREVHAAILKSG-IQPNRY--LENTLLSMYA--KCGSLTDARR 103
Query: 87 VFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF------ 140
VF I+ ++ ++ MI A + + K Y+ M G PD +TF
Sbjct: 104 VFDSIRDRNIVSWTAMIEAFVAGNKNL------EAFKCYETMKLAGCKPDKVTFVSLLNA 157
Query: 141 ---PFLLK----------ECTKRLDGLVGASVYGQVVKFG-------VCDDVFVQNSVIS 180
P LL+ E L+ VG S+ G K G + D + +N V
Sbjct: 158 FTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTW 217
Query: 181 LFMACGFVTSARM-----LFDEMSNRDVVS------------------------------ 205
+ G+ ++ L + M +V
Sbjct: 218 TLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQ 277
Query: 206 -------W--NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
W N++I Y + G L+ A LF + R++ +W +++TG+ Q G EA+ L
Sbjct: 278 SGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINL 337
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
F+ MQ ++ +KPDK+T SVL++C+ + GK +H L +G + DV + +ALV
Sbjct: 338 FRRMQ----QQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVS 393
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMIS-VFALNGYGKEAFDTFREMEAEGVRPNHV 375
MY KCG ++ A VF +M +++ +AWTA+I+ A +G +EA + F +M+ +G++P+ V
Sbjct: 394 MYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKV 453
Query: 376 TFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRS 435
TF +LSAC H GLVE+GR F M Y ++P V HY+C +D+L RAG EAE +I S
Sbjct: 454 TFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILS 513
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDV 495
MP P VWGALL C++H +VE GE+ A+ ++ LDP + YV L +YA AGR++D
Sbjct: 514 MPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDA 573
Query: 496 KKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+K R +M++R + KE PG S +EVDG VH F ++ E++ + L L++ +K G+
Sbjct: 574 EKVRQVMEKRDVVKE-PGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGY 632
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 187/423 (44%), Gaps = 71/423 (16%)
Query: 120 KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
+ L + M+ G F LL+EC + G V+ ++K G+ + +++N+++
Sbjct: 30 EALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 89
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
S++ CG +T AR +FD + +R++VSW AM
Sbjct: 90 SMYAKCGSLTDARRVFDSIRDRNIVSWTAM------------------------------ 119
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
I FV G + EA + ++ M+ + KPDK+T S+L+A + G+ VH +
Sbjct: 120 -IEAFVAGNKNLEAFKCYETMKLAG----CKPDKVTFVSLLNAFTNPELLQLGQKVHMEI 174
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
+GL+ + +GT+LV MY KCG + +A +F +P+K+ + WT +I+ +A G A
Sbjct: 175 VEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVAL 234
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR---------------WC---FVMM- 400
+ M+ V PN +TF +L C +E G+ W + M
Sbjct: 235 ELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMY 294
Query: 401 ---------RHVYLVEPH--VYHYACMIDILSRAGLFSEAERLIRSMP---MEPDVFVWG 446
R ++ PH V + M+ ++ G EA L R M ++PD +
Sbjct: 295 CKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFT 354
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN--LCDMYAKAGRFDDVKKTRNLMKE 504
++L C ++ G+++ Q L+ N Y+ L MYAK G DD N M E
Sbjct: 355 SVLTSCSSPAFLQEGKRIHQQLVHAG-YNLDVYLQSALVSMYAKCGSMDDASLVFNQMSE 413
Query: 505 RGI 507
R +
Sbjct: 414 RNV 416
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 131/298 (43%), Gaps = 46/298 (15%)
Query: 248 GRAREALELFQEM--QSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
GR +EAL + M Q + V V +L CA L +++ G+ VH + +SG+
Sbjct: 26 GRLKEALGIMNTMILQGTRVYSDV------FRGLLQECARLRSLEQGREVHAAILKSGIQ 79
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
+ + L+ MY KCG + A VF + ++ ++WTAMI F EAF + M
Sbjct: 80 PNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETM 139
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL-VEPHVYHYACMIDILSRAG 424
+ G +P+ VTFV LL+A + L++ G+ + + L +EP V ++ + ++ G
Sbjct: 140 KLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRV--GTSLVGMYAKCG 197
Query: 425 LFSEAERLIRSMP----------------------------------MEPDVFVWGALLG 450
S+A + +P + P+ + ++L
Sbjct: 198 DISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQ 257
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRNLMKERGI 507
GC +E G+KV +Y+I + VN L MY K G ++ +K + + R +
Sbjct: 258 GCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDV 315
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 336 KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
K +TLA + +SV G KEA M +G R F GLL CA +E+GR
Sbjct: 9 KVETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGRE 68
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
+ ++P+ Y ++ + ++ G ++A R+ S+ + ++ W A++
Sbjct: 69 VHAAILKSG-IQPNRYLENTLLSMYAKCGSLTDARRVFDSI-RDRNIVSWTAMI 120
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/383 (38%), Positives = 236/383 (61%), Gaps = 6/383 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMS-NRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
D ++ +++++ + G + +R +FDE+ + D + NA++ Y R G +D A LF M
Sbjct: 118 DPYLASALVASYARSGHLAESRRVFDELPPHSDAAARNALLSAYARCGRVDDAESLFAGM 177
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
RN+ SW ++++G+ Q GR EA+ F EM V+P+++T++SVL ACA +GA+
Sbjct: 178 PDRNVISWTAMVSGYAQNGRHEEAVRTFLEMWEGC---GVRPNEVTVSSVLPACAAVGAL 234
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK-KDTLAWTAMISV 348
G+ V Y R G+ +V + ALV+MY KCG + RA+ VF+ + K +D +W +MI
Sbjct: 235 ALGRKVERYARGRGMLTNVYVANALVEMYAKCGSIRRAWMVFRGIGKQRDLCSWNSMIMA 294
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP 408
FA++G +E F ++ G +P+ +TFVG++ AC H GLV++G+ F MR + ++P
Sbjct: 295 FAVHGLWREVLGLFHKLRMTGAKPDGITFVGVILACTHGGLVDEGKLLFNSMREEFGLKP 354
Query: 409 HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ HY CM+D+L RAGL EA+ LI SMPMEPD +WGALLG C HGN+EL E + L
Sbjct: 355 RIEHYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGALLGACSFHGNLELAEVAVEKL 414
Query: 469 IDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM 528
+ L+P N A V L ++YA G++D V + L+KE+ +K G S +E+DG +H+F +
Sbjct: 415 MRLEPQNTANLVILSNIYASHGKWDGVAQVWKLLKEKDHKKSA-GYSFIELDGRMHKFLV 473
Query: 529 KGSPKVVKEELVLILNGLSKIMK 551
+ + E + L+ ++ IMK
Sbjct: 474 EDKSHPIYEMVYDTLDSITLIMK 496
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 123/300 (41%), Gaps = 53/300 (17%)
Query: 62 HHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKC 121
H R A + G + A ++F+ + ++ ++ M+ A N H
Sbjct: 148 HSDAAARNALLSAYARCGRVDDAESLFAGMPDRNVISWTAMVSGYA-----QNGRHEEAV 202
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKF-----GVCDDVFVQN 176
+ G+ P+ +T +L C VGA G+ V+ G+ +V+V N
Sbjct: 203 RTFLEMWEGCGVRPNEVTVSSVLPACAA-----VGALALGRKVERYARGRGMLTNVYVAN 257
Query: 177 SVISLFMACGFVTSARMLFDEMS-NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
+++ ++ CG + A M+F + RD+ SWN+MI+
Sbjct: 258 ALVEMYAKCGSIRRAWMVFRGIGKQRDLCSWNSMIM------------------------ 293
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
F G RE L LF +++ + KPD IT V+ AC + G +D GK +
Sbjct: 294 -------AFAVHGLWREVLGLFHKLRMTG----AKPDGITFVGVILACTHGGLVDEGKLL 342
Query: 296 HGYLRRS-GLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG 353
+R GL + +VD+ G+ G ++ A + MP + D + W A++ + +G
Sbjct: 343 FNSMREEFGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGALLGACSFHG 402
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 268/476 (56%), Gaps = 42/476 (8%)
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
+L+YA VF + ++ + ++ MI A N+ + G ++L+ +ML G+ P+ +T
Sbjct: 277 NLAYARRVFDGLSKASIISWTAMIAAYI----HCNNLNEG--VRLFVKMLGEGMFPNEIT 330
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
L+KEC G GA G+++ + F +SL +A F+
Sbjct: 331 MLSLVKEC-----GTAGALELGKLLHAFTLRNGFT----LSLVLATAFIDM--------- 372
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
Y + GD+ A +F K +++ W+++I+ + Q EA ++F
Sbjct: 373 -------------YGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVH 419
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M + +P++ T+ S+L CA G+++ GKW+H Y+ + G+ D+++ T+ VDMY
Sbjct: 420 MTGCGI----RPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYA 475
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
CG ++ A+ +F E +D W AMIS FA++G+G+ A + F EMEA GV PN +TF+G
Sbjct: 476 NCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIG 535
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
L AC+HSGL+++G+ F M H + P V HY CM+D+L RAGL EA LI+SMPM
Sbjct: 536 ALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMR 595
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTR 499
P++ V+G+ L C++H N++LGE A+ + L+P + V + ++YA A R+ DV R
Sbjct: 596 PNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIR 655
Query: 500 NLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
MK+ GI KE PG SS+EV+G++HEF M +++ +++ + + +++ G+
Sbjct: 656 RAMKDEGIVKE-PGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGY 710
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 179/387 (46%), Gaps = 53/387 (13%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GSL+ A +F I+ D+ +++ MIR S + L L + M + P +
Sbjct: 173 GSLALARLLFDKIENKDVVSWSTMIR------SYDRSGLLDEALDLLRDMHVMRVKPSEI 226
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVC--DDVFVQNSVISLFMACGFVTSARMLFD 196
+ + D +G +++ V++ G C V + ++I +++ C + AR +FD
Sbjct: 227 GMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFD 286
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
+S ++SW AMI Y+ +L+ + LF +M +F
Sbjct: 287 GLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMF--------------------- 325
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVD 316
P++IT+ S++ C GA++ GK +H + R+G +V+ TA +D
Sbjct: 326 --------------PNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFID 371
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MYGKCG V A VF KD + W+AMIS +A N EAFD F M G+RPN T
Sbjct: 372 MYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERT 431
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERL 432
V LL CA +G +E G+W H Y+ ++ + +D+ + G A RL
Sbjct: 432 MVSLLMICAKAGSLEMGKWI-----HSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRL 486
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ + D+ +W A++ G MHG+ E
Sbjct: 487 F-AEATDRDISMWNAMISGFAMHGHGE 512
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 180/394 (45%), Gaps = 44/394 (11%)
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLF 182
K+Y M T D P +LK C L+G V+G VVK G DVFV N++I ++
Sbjct: 110 KIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMY 169
Query: 183 MACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIIT 242
G + AR+LFD++ N+DVVSW+ MI Y RSG LD ALDL R M
Sbjct: 170 SEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMR--------- 220
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS 302
VKP +I + S+ A L + GK +H Y+ R+
Sbjct: 221 --------------------------VKPSEIGMISITHVLAELADLKLGKAMHAYVMRN 254
Query: 303 GL--DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
G V + TAL+DMY KC + A VF + K ++WTAMI+ + E
Sbjct: 255 GKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVR 314
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVM-MRHVYLVEPHVYHYACMIDI 419
F +M EG+ PN +T + L+ C +G +E G+ +R+ + + + ID+
Sbjct: 315 LFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLS--LVLATAFIDM 372
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI--DLDPLNHA 477
+ G A + S + D+ +W A++ + ++ + ++ + P N
Sbjct: 373 YGKCGDVRSARSVFDSFKSK-DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRP-NER 430
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
V+L + AKAG + K + + ++GI+ ++
Sbjct: 431 TMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDM 464
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 53/303 (17%)
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
+IT +++ +A +++ M+ + E D I SVL AC + + G+ VHG++
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTE----VDNFVIPSVLKACCLIPSFLLGQEVHGFV 150
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
++G DV + AL+ MY + G + A +F ++ KD ++W+ MI + +G EA
Sbjct: 151 VKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEAL 210
Query: 360 DTFREMEAEGVRPNHVTFVGL-----------LSACAHSGLVEKGR-------WCFVMM- 400
D R+M V+P+ + + + L H+ ++ G+ C ++
Sbjct: 211 DLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALID 270
Query: 401 -----------RHVY--LVEPHVYHYACMIDILSRAGLFSEAERLIRSM---PMEPDVFV 444
R V+ L + + + MI +E RL M M P+
Sbjct: 271 MYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEIT 330
Query: 445 WGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLC------DMYAKAGRFDDVKKT 498
+L+ C G +ELG+ L+ L + F ++L DMY K G DV+
Sbjct: 331 MLSLVKECGTAGALELGK-----LLHAFTLRNGFTLSLVLATAFIDMYGKCG---DVRSA 382
Query: 499 RNL 501
R++
Sbjct: 383 RSV 385
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 270/477 (56%), Gaps = 41/477 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G+L A VF + D+ ++N +I A E ND + +M G+ PD L
Sbjct: 322 GNLGDAQKVFQQMFLRDVVSWNSIIAA-----YEQNDD-PVTARGFFFKMQLNGLEPDLL 375
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T L + D SV+G M G++ A
Sbjct: 376 TLVSLASIAAQSRDYKNSRSVHG-------------------FIMRRGWLMEA------- 409
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
VV NA++ Y + G +D A +F + +++ SWN++I+G+ Q G A EA+E+++
Sbjct: 410 ----VVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYR 465
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M+ +K ++ T S+L+A A++GA+ G +HG+L ++ L DV +GT L+D+Y
Sbjct: 466 MMEEC---REIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLY 522
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
GKCG + A +F ++P++ ++ W A+IS ++G+G++A FREM+ EGV+P+HVTF+
Sbjct: 523 GKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFI 582
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
LLSAC+HSGLV++G+W F +M+ Y ++P + HY CM+D+L RAG A I+ MP+
Sbjct: 583 SLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPL 641
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
PD +WGALLG C++HGN+ELG+ + L ++D N +YV L ++YA G+++ V K
Sbjct: 642 HPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKV 701
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R+L +ERG++K PG SS+EV+ V F +E+ L L+ MK+ G+
Sbjct: 702 RSLARERGLKK-TPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGY 757
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 224/480 (46%), Gaps = 58/480 (12%)
Query: 16 PAKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL-FFCA 74
P P K + ++ + D C K +H ++ S +Q+N + RL+ + +
Sbjct: 65 PFHWRQPAK-NEEIDFNSLFDSCTKTLLAKRLHALLVVSGKIQSN---FISIRLVNLYAS 120
Query: 75 LSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLK-LYKQMLCTGI 133
L G +S + F I+R D+YT+N MI S+ + H + + Y+ +L T
Sbjct: 121 L---GDVSLSRGTFDQIQRKDVYTWNSMI------SAYVRNGHFREAIDCFYQLLLVTKF 171
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
D TFP +LK C +DG ++ V K G DVFV S+I ++ GFV AR
Sbjct: 172 QADFYTFPPVLKACQTLVDG---RKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIAR- 227
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LF M R++ SWN++I+G +Q G A +A
Sbjct: 228 ------------------------------SLFDDMPFRDMGSWNAMISGLIQNGNAAQA 257
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
L++ EM+ E + D +T+AS+L CA LG I +H Y+ + GL+ ++ + A
Sbjct: 258 LDVLDEMRL----EGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNA 313
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
L++MY K G + A VF++M +D ++W ++I+ + N A F +M+ G+ P+
Sbjct: 314 LINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPD 373
Query: 374 HVTFVGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
+T V L S A S + R +MR +L+E V A M D+ ++ G+ A ++
Sbjct: 374 LLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVM-DMYAKLGVIDSAHKV 432
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD--PLNHAFYVNLCDMYAKAG 490
+P++ DV W L+ G +G +V + + + LN +V++ YA G
Sbjct: 433 FNLIPVK-DVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVG 491
>gi|357477477|ref|XP_003609024.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510079|gb|AES91221.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 544
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 271/522 (51%), Gaps = 67/522 (12%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH--IK 92
+++ +M ELK++ I KS + H L T+L+FF ALS G+LS+A ++F H I
Sbjct: 13 LNKLSSMSELKQLQAIITKSG---LHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSIL 69
Query: 93 RSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
+ + N MIRA ++ + L +Y QML + D T F+LK C++
Sbjct: 70 IHNPFISNTMIRAF------SHSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYK 123
Query: 153 -------------GLV-----GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
LV G ++ +V+K G +D VQNS++ + CG V+ AR L
Sbjct: 124 LIQESGSCDDDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARYL 183
Query: 195 FDEMSNRDVVSWNAMIIG-------------------------------YLRSGDLDVAL 223
FD++ + +VSWN MI Y+R GD+ A
Sbjct: 184 FDQIKDTSLVSWNIMISAYDRVDDYELADHLLELMPCKTVISWNTLIARYIRLGDVQAAR 243
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
+F M +RN SWNS+I G V ALELF EMQ++ VKP ++T+ S+L AC
Sbjct: 244 RVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAG----VKPTEVTLISILGAC 299
Query: 284 AYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWT 343
A GA++ G ++ L+ + +G ALV+MY KCG + A+ +F M K W
Sbjct: 300 AETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWN 359
Query: 344 AMISVFALNGYGKEAFDTFREMEAE---GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
AM+ A++GY +E F F EME +RP+ VTF+G+L AC+H GLV+K RW F M
Sbjct: 360 AMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHM 419
Query: 401 RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVEL 460
Y + P HY CM+D+L+R GL EA ++I + P + V +W LLG C+ N EL
Sbjct: 420 VKRYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTEL 479
Query: 461 GEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
E + L L L YV L ++YA+AGR+D+V++ R+ M
Sbjct: 480 AEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEM 521
>gi|296082839|emb|CBI22140.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 239/428 (55%), Gaps = 69/428 (16%)
Query: 156 GASVYGQVVKFGVC---DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIG 212
G S++GQV KFG D ++V+ +++ + G + AR +FDEM+ R+VVSWN+M+ G
Sbjct: 3 GISIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAG 62
Query: 213 YLRSGDLDVALDLFRR-------------------------------MKKRNIFSWNSII 241
YL++GD++ A LF++ M ++N SW ++I
Sbjct: 63 YLKAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMI 122
Query: 242 TGF-------------------------------VQGGRAREALELFQEMQSSSVEEMVK 270
+G+ Q R EAL LF M + V V+
Sbjct: 123 SGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVN--VQ 180
Query: 271 PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
PD++T+ASV+SAC+ LG + G W+ Y+RR G++ D + TAL+D+Y KCG +++AY +
Sbjct: 181 PDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYEL 240
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F + KKD +A+TAMI +NG +A F EM + PN +TF+GLL+A H+GLV
Sbjct: 241 FHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLV 300
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
E+G CF M+ LV P V HY M+D+ RAG EA LI+SMPM+P VWGALL
Sbjct: 301 EEGYRCFTSMKKYNLV-PSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLL 359
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
C++H NVE GE AQ+ +L+P + L ++YA R+DDVK+ R + KE+G K
Sbjct: 360 ACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSK- 418
Query: 511 VPGCSSVE 518
+PGCS +E
Sbjct: 419 IPGCSWME 426
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 139/329 (42%), Gaps = 52/329 (15%)
Query: 66 ITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
++ + S G + A +F + DL +N MI AC + ++ + L L+
Sbjct: 116 VSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMI---ACYA---QNSRPNEALNLF 169
Query: 126 KQML--CTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
ML + PD +T ++ C++ D G + + + G+ D + +++ L+
Sbjct: 170 NNMLNPYVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYA 229
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
CG + A LF + +D+V++ AMI+G +G
Sbjct: 230 KCGSIDKAYELFHGLRKKDLVAYTAMILGCGING-------------------------- 263
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
+A +A++LF EM V+ + P+ IT +L+A + G ++ G +++
Sbjct: 264 -----KAIDAIKLFDEM----VDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYN 314
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA-WTAMISVFALNG---YGKEAF 359
L V +VD++G+ G ++ A + K MP + W A++ L+ +G+ A
Sbjct: 315 LVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAA 374
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSG 388
E+E P+ + LLS SG
Sbjct: 375 QHCFELE-----PDTTGYRSLLSNIYASG 398
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 278/527 (52%), Gaps = 60/527 (11%)
Query: 34 AIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR 93
A++ C ++ +EIH ++ KS L D I L C + G A +F +
Sbjct: 48 AVNSCPSISNCREIHARVFKS--LLYRD--GFIGDQLVTCYNKL-GYAEDALKLFDDMPH 102
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKL-----YKQMLCTGISPDCLTFPFLLKECT 148
DL ++N +I + +CL + Y + P+ +T ++ C+
Sbjct: 103 KDLVSWNSLISGFS------------RCLHMSLTAFYTMKFEMSVKPNEVTILSMISACS 150
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
LD G ++G +K G +V V NS+I++
Sbjct: 151 GALDA--GKYIHGFGIKVGGTLEVKVANSLINM--------------------------- 181
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
Y +SGDL A LF + N SWNSII V G ARE ++ F +M+ +E+
Sbjct: 182 ----YGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQ- 236
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
D+ TI ++L AC +LG + +HG + +G + I TAL+D Y K G + +Y
Sbjct: 237 ---DEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASY 293
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
GVF E+ D +AWTAM++ +A +G G+EA F M +G+ P+HVTF LLSAC+HSG
Sbjct: 294 GVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSG 353
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
LV +G+ F +M VY +EP V HY+CM+D+L R GL ++A +I++MPMEP+ VWGAL
Sbjct: 354 LVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGAL 413
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
LG C++HGN+ELG++VA++LI+++PL+ Y+ L +MY+ + + D K R L+KERG+
Sbjct: 414 LGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGL- 472
Query: 509 KEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K PG SS+E H F + E++ L L ++ G+
Sbjct: 473 KRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGY 519
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 237 WNS-IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
WNS I+ F R + L L + V + P+ I ++++L A +I + + +
Sbjct: 5 WNSSILYNFFIQSRTQYPLLLHRSFHL--VRQCATPEAI-VSALLIAVNSCPSISNCREI 61
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H + +S L D IG LV Y K G E A +F +MP KD ++W ++IS F+ +
Sbjct: 62 HARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLH- 120
Query: 356 KEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV-YLVEPHVYHY 413
+ F M+ E V+PN VT + ++SAC SG ++ G++ V +E V +
Sbjct: 121 -MSLTAFYTMKFEMSVKPNEVTILSMISAC--SGALDAGKYIHGFGIKVGGTLEVKVAN- 176
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG-----GCQMHG 456
+I++ ++G + A RL ++P +P+ W +++ GC G
Sbjct: 177 -SLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAAQVTNGCAREG 222
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/365 (41%), Positives = 221/365 (60%), Gaps = 7/365 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D N+++ ++ G + A LF+ M R+VVSW+ M+ GY ++GD+++A LF RM
Sbjct: 42 DAVSWNTILDGYVKAGEMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMP 101
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+N+ SW I++G+ G A++A+ F++M+ E +KPD T+ S+L++CA G +
Sbjct: 102 VKNLVSWTIIVSGYAVKGLAKDAIRSFEQME----EAGLKPDDGTVISILASCAESGLLG 157
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
GK VH + R C V + ALVDMY KCG V+RA VF M KKD ++W M+ A
Sbjct: 158 LGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLA 217
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
++G+G++A F M EG RP+ VT V +L AC H+G V++G F M Y + PH+
Sbjct: 218 MHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHI 277
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+D+L R G EA RL++SMP+EP+V +WG LLG C+MH V L E+V L
Sbjct: 278 EHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFK 337
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSM-- 528
L+P + Y L +++A AG + V R MK GI+K G SS+EVD VHEF++
Sbjct: 338 LEPSDPGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQKP-SGASSIEVDDEVHEFTVFD 396
Query: 529 KGSPK 533
K PK
Sbjct: 397 KSHPK 401
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 50/274 (18%)
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
LF M RDVVSWN+MI G L+ G+L A LF M ++ SWN+I+ G+V+ G +A
Sbjct: 3 LFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKA 62
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
LF+ M P++ +VV +
Sbjct: 63 FGLFESM----------PER---------------------------------NVVSWST 79
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
+V Y K G +E A +F MP K+ ++WT ++S +A+ G K+A +F +ME G++P+
Sbjct: 80 MVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPD 139
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHV-YLVEPHVYHYACMIDILSRAGLFSEAERL 432
T + +L++CA SGL+ G+ + + Y +V + ++D+ ++ G A +
Sbjct: 140 DGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSN--ALVDMYAKCGQVDRALSV 197
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQ 466
M + D+ W +L G MHG+ GEK Q
Sbjct: 198 FNGMS-KKDLVSWNCMLQGLAMHGH---GEKALQ 227
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 131/295 (44%), Gaps = 48/295 (16%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G + A +F + +L ++ I++ A K + S ++QM G+ PD
Sbjct: 87 AGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRS------FEQMEEAGLKPDD 140
Query: 138 LTFPFLLKECTKR-LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFD 196
T +L C + L GL G V+ + + V V N+++ ++ CG V A +F+
Sbjct: 141 GTVISILASCAESGLLGL-GKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFN 199
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALEL 256
MS +D+VSWN M+ G G +AL+L
Sbjct: 200 GMSKKDLVSWNCML-------------------------------QGLAMHGHGEKALQL 228
Query: 257 FQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALV 315
F M+ +E +PDK+T+ +VL AC + G +D G ++ + R G+ + +V
Sbjct: 229 FSIMR----QEGFRPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMV 284
Query: 316 DMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALN---GYGKEAFDTFREME 366
D+ G+ G ++ AY + + MP + + + W ++ ++ G +E D ++E
Sbjct: 285 DLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLE 339
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 260/463 (56%), Gaps = 37/463 (7%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G++ A N F + D++++ +I A + N+ CL L+ M + PD +
Sbjct: 284 GNVEEAHNSFCQVVDKDVFSWTSVIGVCA-RFGFMNE-----CLNLFWDMQVDDVYPDGI 337
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+L + G + +G +V+ D V N+++S++ G + A LFD +
Sbjct: 338 VVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGV 397
Query: 199 SNRDVVSWNAMIIGYL------------------------RSGDLDVALDLFRRMKKRNI 234
SWN M+ GY+ + G+L +A +F R +R++
Sbjct: 398 HEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCR-TQRDV 456
Query: 235 FSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKW 294
+WN++I+ + G EA+ LF EM + E + P+ T+ VLSAC +L +++ GK
Sbjct: 457 VTWNTLISSYTHSGHYAEAITLFDEM----ISEKLNPNSATLVIVLSACCHLPSLEKGKM 512
Query: 295 VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGY 354
VH Y++ G + +V +GTALVDMY KCG +E++ +F M +KD ++W MIS + L+G
Sbjct: 513 VHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGD 572
Query: 355 GKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA 414
A + F++ME V+PN +TF+ LLSAC H+G V++G+ F M++ Y ++P++ H+A
Sbjct: 573 ANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRMQY-YSIKPNLKHFA 631
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPL 474
CM D+L R+G EAE L++SMP+ PD VWG LL C++H +E+G +VA+ I+ DP
Sbjct: 632 CMADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPE 691
Query: 475 NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
N +Y+ L +MY G++D+ ++ R LMKERGI K G S+V
Sbjct: 692 NDGYYIMLSNMYGSMGKWDEAERARELMKERGIGKRA-GWSAV 733
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 183/394 (46%), Gaps = 47/394 (11%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
+T VF + D + +N +I+ S ++ + K Y QM P+ T P +
Sbjct: 83 STYVFDSTNQKDTFLWNSIIK------SHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMI 136
Query: 144 LKECTKRLDGLVGASVYGQVVKFGV-CDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
+ C + L G ++G V K G+ ++ V +S + ++ CG + A ++FDE+ RD
Sbjct: 137 VATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRD 196
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
VV SW +++ G+V + + LE EM+
Sbjct: 197 VV-------------------------------SWTALVIGYVHNDDSEKGLECLCEMRR 225
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
+ K + T+ AC LGA+ G+ +HG ++GL C V+ ++L+ MY KCG
Sbjct: 226 IG-GDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCG 284
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
VE A+ F ++ KD +WT++I V A G+ E + F +M+ + V P+ + +L
Sbjct: 285 NVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILL 344
Query: 383 ACAHSGLVEKGR-WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
+S +V +G+ + +++R Y+++ V + ++ + + G + AE+L + E
Sbjct: 345 GFGNSMMVREGKAFHGLIVRRNYVLDDTVNN--ALLSMYCKFGTLNPAEKLFDGVH-EWS 401
Query: 442 VFVWGALLGG---CQMHGN-VELGEKVAQYLIDL 471
W ++ G C + N V+ +A LID+
Sbjct: 402 KESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDM 435
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
++ G ++VF+ + +ISL+ + S+ +FD + +D WN++I + +G+ A
Sbjct: 55 IITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNYFKA 114
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
D + +M+ N P++ TI +++
Sbjct: 115 FDFYIQMRYDN-----------------------------------TPPNQFTIPMIVAT 139
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCD-VVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
CA L ++ GK++HG + +SGL + +G++ V MY KCG +E A +F E+ +D ++
Sbjct: 140 CAELLWLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVS 199
Query: 342 WTAMISVFALNGYGKEAFDTFREME---AEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV 398
WTA++ + N ++ + EM +G + N T G AC + G + GR
Sbjct: 200 WTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHG 259
Query: 399 MMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ L V + ++ + S+ G EA + ++ DVF W +++G C G
Sbjct: 260 LAVKTGLGCSQVVQ-SSLLSMYSKCGNVEEAHNSFCQV-VDKDVFSWTSVIGVCARFG 315
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H + +G +V I + L+ +Y + VF +KDT W ++I NG
Sbjct: 52 HALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNY 111
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+AFD + +M + PN T +++ CA +E+G++ ++ L + +
Sbjct: 112 FKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSS 171
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
+ + ++ G+ +A + + + DV W AL+ G + + E G
Sbjct: 172 FVYMYAKCGVMEDASLMFDEIVVR-DVVSWTALVIGYVHNDDSEKG 216
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/430 (37%), Positives = 245/430 (56%), Gaps = 20/430 (4%)
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
I PD F LL+ C D + ++++FG + + S+IS ++ C + A
Sbjct: 7 ILPDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAY 66
Query: 193 MLFDEMSNRDVVSW-------NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV 245
+ R V SW N +I ++R G+ ++A +F +M R++ +WNS+I G+V
Sbjct: 67 QVI-----RQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYV 121
Query: 246 QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLD 305
+ G+ EAL FQ M SS+VE PDK T ASV++ACA LGA++H +W+H + + ++
Sbjct: 122 RNGKFEEALRSFQAMLSSNVE----PDKFTFASVITACARLGALNHAQWLHDLMVQKRIE 177
Query: 306 CDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM 365
+ ++ +AL+DMY KCG +E A VF+ + + D W ++I+ A++G +A F +M
Sbjct: 178 VNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKM 237
Query: 366 EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL 425
EAE V P+ +TF+G+L AC+H GLV++GR F +M + Y ++P + HY M+D+L RAGL
Sbjct: 238 EAENVLPDSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGL 297
Query: 426 FSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDM 485
EA +I +MPMEPDV VW LL C+ H N ELGE + ++ YV L ++
Sbjct: 298 LDEAYAMITAMPMEPDVIVWRILLSACRTHRNTELGEVA---VANISGPKSGDYVLLSNI 354
Query: 486 YAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNG 545
Y R+D+ ++ R +MKE G+RK G S E + VVH F E L IL G
Sbjct: 355 YCSQNRWDNAQEVREMMKEEGVRKR-RGKSWFEWEDVVHRFRAGDKSHPETEALYKILEG 413
Query: 546 LSKIMKNGGF 555
L + K GF
Sbjct: 414 LIQRTKLEGF 423
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 144/348 (41%), Gaps = 78/348 (22%)
Query: 35 IDECK---NMRELKEIHTQIIK-----------------SPCLQTNDHHSLITRLLFFCA 74
++ CK ++R E HT+II+ C Q N + +I R +F
Sbjct: 18 LEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQVI-RQVFSWT 76
Query: 75 LSVSG------------SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCL 122
+S++G A VF + D+ T+N MI + + L
Sbjct: 77 VSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMI------GGYVRNGKFEEAL 130
Query: 123 KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGAS-VYGQVVKFGVCDDVFVQNSVISL 181
+ ++ ML + + PD TF ++ C RL L A ++ +V+ + + + +++I +
Sbjct: 131 RSFQAMLSSNVEPDKFTFASVITACA-RLGALNHAQWLHDLMVQKRIEVNFILSSALIDM 189
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ CG + +A+ +F+ + DV WN++ I
Sbjct: 190 YSKCGRIETAKEVFESVERNDVSVWNSL-------------------------------I 218
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
G G A +A+ +F +M++ E V PD +T +L AC++ G + G+ +
Sbjct: 219 NGLAVHGLALDAMMVFSKMEA----ENVLPDSLTFLGILKACSHCGLVKEGRKYFDLMEN 274
Query: 302 -SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMIS 347
+ + A+VD+ G+ G ++ AY + MP + D + W ++S
Sbjct: 275 YYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLS 322
>gi|22293716|dbj|BAC10060.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 631
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 225/377 (59%), Gaps = 4/377 (1%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
N +IS + G V +AR +FD M +DVVSW AM+ Y + GDLD +LF M +N+
Sbjct: 248 NLMISGYAMSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKIGDLDTVNELFDHMPVKNLV 307
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SWN++ITG+ R EAL FQ M +E +PD+ T+ SV+SACA LG++++ W+
Sbjct: 308 SWNAMITGYNHNSRYDEALRTFQLMM---LEGRFRPDEATLVSVVSACAQLGSVEYCNWI 364
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
++ +S + V +G AL+DM+ KCG V RA +F +M + + WT MIS FA NG
Sbjct: 365 SSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETRCIITWTTMISGFAFNGLC 424
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
++A + M EGV+ + F+ L+ACAH GL+++G F M Y ++P + HY C
Sbjct: 425 RDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIFNEMVERYNIQPRMEHYGC 484
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
M+D+L RAG EA I SMP+EP V +W LL C HGN EL E V++ + +L+P N
Sbjct: 485 MVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLCSCVAHGNAELIEYVSKKITELEPFN 544
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
++ V + + A GR+D V R M+ GI K VPG SS++V VHEF K +
Sbjct: 545 SSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEK-VPGSSSIQVGSEVHEFLAKDTRHKR 603
Query: 536 KEELVLILNGLSKIMKN 552
++E+ ++GL +M++
Sbjct: 604 RKEIYETVDGLMALMRH 620
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 171/335 (51%), Gaps = 28/335 (8%)
Query: 132 GISPDCLTFPFLLKECTKRLDGLVG--ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVT 189
G+ P+ TF FLL+ C L GL V+GQ+V+ G DVFVQN+++ ++ CG
Sbjct: 106 GVPPNGFTFTFLLRACA--LLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGG 163
Query: 190 -----SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
+AR +FDEM +RDVVSWN+++ Y+ SGD A+ F M +RN+ SWN+++ GF
Sbjct: 164 GGGVGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGF 223
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
+ G A +F M S + ++ ++S A G ++ + V + +
Sbjct: 224 ARMGDMVTARAVFDRMPSR--------NAVSWNLMISGYAMSGDVEAARSVFDRMDQK-- 273
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFRE 364
DVV TA+V Y K G ++ +F MP K+ ++W AMI+ + N EA TF+
Sbjct: 274 --DVVSWTAMVSAYAKIGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQL 331
Query: 365 MEAEG-VRPNHVTFVGLLSACAHSGLVEKGRW--CFVMMRHVYLVEPHVYHYACMIDILS 421
M EG RP+ T V ++SACA G VE W F+ +++L V +ID+ +
Sbjct: 332 MMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLT---VALGNALIDMFA 388
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ G AE + M + W ++ G +G
Sbjct: 389 KCGDVGRAESIFYKMETRC-IITWTTMISGFAFNG 422
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 133/347 (38%), Gaps = 68/347 (19%)
Query: 61 DHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
D +++ A + G L +F H+ +L ++N MI + +++ +
Sbjct: 271 DQKDVVSWTAMVSAYAKIGDLDTVNELFDHMPVKNLVSWNAMI------TGYNHNSRYDE 324
Query: 121 CLKLYKQMLCTG-ISPDCLTFPFLLKECTK--------RLDGLVGASVYGQVVKFGVCDD 171
L+ ++ M+ G PD T ++ C + + +G S V G
Sbjct: 325 ALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALG---- 380
Query: 172 VFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
N++I +F CG V A +F +M R +++W M
Sbjct: 381 ----NALIDMFAKCGDVGRAESIFYKMETRCIITWTTM---------------------- 414
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
I+GF G R+AL ++ M E V+ D + L+ACA+ G +
Sbjct: 415 ---------ISGFAFNGLCRDALLVYNNM----CREGVQLDDTVFIAALAACAHGGLLQE 461
Query: 292 GKW--VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISV 348
G W + + R + + +VD+ G+ G ++ A + MP + + W ++
Sbjct: 462 G-WSIFNEMVERYNIQPRMEHYGCMVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLC- 519
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+ +G + + + P + ++ L+S C+ +GRW
Sbjct: 520 -SCVAHGNAELIEYVSKKITELEPFNSSYQVLVSNCS----ALEGRW 561
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 269/541 (49%), Gaps = 106/541 (19%)
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
+Y + F+H + D + +N +I+ S ++ + L + ML G+S D +
Sbjct: 47 NYHSCSFAHGEVEDPFLWNAVIK------SHSHGVDPKRALIWFCLMLENGVSVDKFSLS 100
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL-------------------- 181
+LK C++ G ++G + K G+ D+F+QN +I L
Sbjct: 101 LVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQR 160
Query: 182 -----------FMACGFVTSARMLFD---------------------------------- 196
++ CG + SAR LFD
Sbjct: 161 DSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFA 220
Query: 197 EMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW------------------- 237
EM +D++SWN++I GY++ G ++ A DLF M +R++ +W
Sbjct: 221 EMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTL 280
Query: 238 ------------NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAY 285
NS++ G+VQ EALE+F +M+ E + PD+ T+ VLSA A
Sbjct: 281 FDQMPHRDVVAYNSMMAGYVQNKYNMEALEIFSDMEK---ESHLSPDETTLVIVLSAIAQ 337
Query: 286 LGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAM 345
LG + +H Y+ +G AL+DMY KCG +++A VF+ + K W AM
Sbjct: 338 LGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWNAM 397
Query: 346 ISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL 405
I A++G G+ AFD E+E ++P+ +TFVG+L+AC+HSGLV++G CF +MR +
Sbjct: 398 IGGLAIHGLGESAFDMLLEIERRSIKPDDITFVGILNACSHSGLVKEGLLCFELMRRKHK 457
Query: 406 VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVA 465
+EP + HY CM+DILSR+G A+ LI MPMEP+ +W L C H E GE VA
Sbjct: 458 IEPRLQHYGCMVDILSRSGSIELAKNLIEEMPMEPNDVIWRTFLTACSHHKEFETGEVVA 517
Query: 466 QYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHE 525
++LI N + YV L +MYA G + D ++ R +MKER ++K VPGCS +E+DG VHE
Sbjct: 518 KHLILQAGYNPSSYVLLSNMYASFGMWKDARRVRTMMKERELQK-VPGCSWIELDGRVHE 576
Query: 526 F 526
F
Sbjct: 577 F 577
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 269/481 (55%), Gaps = 15/481 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TGISPDC 137
G + A ++F + + ++N MI + + K LKL+ +ML + ++PD
Sbjct: 244 GRMDLAESLFESMPGRSIVSWNAMI------AGYNQNGLDAKALKLFSRMLHESSMAPDE 297
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T +L C + +G V+ +++ + + V N++IS + G V +AR + D+
Sbjct: 298 FTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQ 357
Query: 198 MSNRD--VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
D V+S+ A++ GY++ GD++ A ++F M R++ +W ++I G+ Q GR EA++
Sbjct: 358 SMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAID 417
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
LF+ M + E P+ T+A+VLS CA L +D+GK +H RS L+ + A++
Sbjct: 418 LFRSMITCGPE----PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAII 473
Query: 316 DMYGKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
MY + G A +F ++ +K+T+ WT+MI A +G G+EA F EM GV P+
Sbjct: 474 TMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDR 533
Query: 375 VTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
+T+VG+LSAC+H+G V +G+ + +++ + + P + HYACM+D+L+RAGLFSEA+ IR
Sbjct: 534 ITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIR 593
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDD 494
MP+EPD WG+LL C++H N EL E A+ L+ +DP N Y + ++Y+ GR+ D
Sbjct: 594 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 653
Query: 495 VKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGG 554
+ KE+ +RKE G S + +H F ++ + + + + +K G
Sbjct: 654 AARIWKARKEKAVRKET-GFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAG 712
Query: 555 F 555
F
Sbjct: 713 F 713
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 215/478 (44%), Gaps = 71/478 (14%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMI----RANACKSSETNDTHSGKCLKLYKQMLCTGI 133
SG L+ A VF+ + D ++ +M+ RA G+ +K M G
Sbjct: 111 SGRLADARGVFAEMPERDAVSWTVMVVGLNRAG----------RFGEAIKTLLDMTADGF 160
Query: 134 SPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARM 193
+P T +L C G VG V+ VVK G+ V V NSV++++ CG +A
Sbjct: 161 TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETAST 220
Query: 194 LFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
+F+ M R V SWNAM+ G +D+A LF M R+I SWN++I G+ Q G +A
Sbjct: 221 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKA 280
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL--------- 304
L+LF M E + PD+ TI SVLSACA LG + GK VH Y+ R+ +
Sbjct: 281 LKLFSRMLH---ESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNA 337
Query: 305 ------------------------DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTL 340
D +V+ TAL++ Y K G +E A +F M +D +
Sbjct: 338 LISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVV 397
Query: 341 AWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMM 400
AWTAMI + NG EA D FR M G PN T +LS CA ++ G+ +
Sbjct: 398 AWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ--IHC 455
Query: 401 RHVY-LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
R + L+E +I + +R+G F A R+ + + W +++ HG E
Sbjct: 456 RAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515
Query: 460 ----LGEKVAQYLIDLDPL---------NHAFYVNLCDMYAKAGRFDDVKKTRNLMKE 504
L E++ + ++ D + +HA +VN Y +D +K + E
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRY-----YDQIKNEHQIAPE 568
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 171/365 (46%), Gaps = 47/365 (12%)
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM----ACGFVTSARMLF 195
+ LL+ C + G +++ + VK G+ ++ N+++S + G + AR LF
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 196 DE--MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREA 253
DE ++ R+V +WN+++ + +SG L A +F M +R+ SW ++ G + GR EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 254 LELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA 313
++ +M + P + T+ +VLS+CA A G+ VH ++ + GL V + +
Sbjct: 149 IKTLLDMTADG----FTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANS 204
Query: 314 LVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPN 373
+++MYGKCG E A VF+ MP + +W AM+S+ G A F M +
Sbjct: 205 VLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSI--- 261
Query: 374 HVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLI 433
V++ +++ +GL K LFS R++
Sbjct: 262 -VSWNAMIAGYNQNGLDAKA-----------------------------LKLFS---RML 288
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRF 492
M PD F ++L C GNV +G++V Y++ + ++ N L YAK+G
Sbjct: 289 HESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSV 348
Query: 493 DDVKK 497
++ ++
Sbjct: 349 ENARR 353
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 280/519 (53%), Gaps = 17/519 (3%)
Query: 39 KNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYT 98
KN K++H QIIKS N HH L+ A G L A +F + + D
Sbjct: 22 KNPFIAKKLHAQIIKS---GLNHHHPFPKTLI--DAYGKCGLLKDALKLFDALPQQDHVA 76
Query: 99 YNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK--RLDGLVG 156
+ ++ +AC S N H K + +L G+ PD F L+K C + +G
Sbjct: 77 WATVL--SACNLS--NLPH--KAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLG 130
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
++ + + +D V++S++ ++ R +FD + +SW AMI GY RS
Sbjct: 131 KQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARS 190
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
G AL+LFR +N+++W ++I+G VQ G A +AL LF EM+ V D + +
Sbjct: 191 GRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVS---IADPLVL 247
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+SV+ ACA + GK VH + G + + I ALVDMY KC V A +F EM +
Sbjct: 248 SSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRR 307
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD ++WT++I A +G +EA + +M GV+PN VTFVGL+ AC+H GLV KGR
Sbjct: 308 KDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRAL 367
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F M + + P + HY C++D+ SR+G EAE LIR+MP++PD W ALL C+ HG
Sbjct: 368 FKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHG 427
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSS 516
N ++ ++A +L+DL P + + Y+ L ++YA AG +++V R LM + ++K VPG S
Sbjct: 428 NTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKK-VPGYSC 486
Query: 517 VEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
V++ F + + +K+E++ ++ L M+ G+
Sbjct: 487 VDLGREFQVFHAGEASQPMKDEILGLMTKLDSEMRRRGY 525
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 153/378 (40%), Gaps = 78/378 (20%)
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
R + + ++ Q++K G+ ++I + CG + A LFD + +D V+W A
Sbjct: 21 RKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAW-AT 79
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
++ +L FS + I + E +
Sbjct: 80 VLSACNLSNL-----------PHKAFSISLPI-----------------------LHEGL 105
Query: 270 KPDKITIASVLSACAYLGA--IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
+PD +S++ ACA LG+ + GK +H S D V+ ++LVDMY K +
Sbjct: 106 QPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYG 165
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF + + +++WTAMIS +A +G EA + FRE + N + L+S S
Sbjct: 166 RAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFK----NLYAWTALISGLVQS 221
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGA 447
G + FV MR R G+ S A+ L+ S +
Sbjct: 222 GNANDALYLFVEMR--------------------REGV-SIADPLVLS-----------S 249
Query: 448 LLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRNLMKERG 506
++G C ELG++V +I L + F N L DMYAK DV + + E
Sbjct: 250 VVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCS---DVVAAKYIFCEMR 306
Query: 507 IRKEVPGCSSVEVDGVVH 524
RK+V +S+ V H
Sbjct: 307 -RKDVVSWTSIIVGTAQH 323
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 255/456 (55%), Gaps = 36/456 (7%)
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ ++ + + NA S +++ + + L++QM G+ + +T L+ C ++
Sbjct: 110 NFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLE 169
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G+S++ +K+G DV V N I+++M CG V A+ LFDEM + ++SWNAM+ GY
Sbjct: 170 LGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGY- 228
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
Q G A LEL++ M + V PD +
Sbjct: 229 ------------------------------AQNGLATNVLELYRNMDMNGVH----PDPV 254
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ VLS+CA LGA G V ++ SG + + AL++MY +CG + +A VF M
Sbjct: 255 TLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 314
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
P++ ++WTA+I + ++G+G+ A F+EM G+ P+ FV +LSAC+H+GL ++G
Sbjct: 315 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 374
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F MM+ Y +EP HY+CM+D+L RAG EA+ LI SMP++PD VWGALLG C++
Sbjct: 375 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 434
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
H NVEL E + +I+L+P N +YV L ++Y+ A V + R +MKE+ ++K+ PGC
Sbjct: 435 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKD-PGC 493
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
S VE+ G VH F + + +E+ +L L I+
Sbjct: 494 SYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAII 529
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 46/297 (15%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS++YA +F + L ++N M+ A TN L+LY+ M G+ PD +
Sbjct: 201 GSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATN------VLELYRNMDMNGVHPDPV 254
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C VG V ++ G + F+ N++I+++ CG +T A+ +FD M
Sbjct: 255 TLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 314
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
R +VSW A+I GY G ++A+ LF+ M + I
Sbjct: 315 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGI------------------------ 350
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDM 317
+PD VLSAC++ G D G ++R+ L+ + +VD+
Sbjct: 351 -----------EPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDL 399
Query: 318 YGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG---YGKEAFDTFREMEAEGV 370
G+ G ++ A + + MP K D W A++ ++ + AF+ E+E E +
Sbjct: 400 LGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENI 456
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 235/412 (57%), Gaps = 28/412 (6%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DVF +++S ++ G + A+ FDEM ++ VS+NAMI GY+++ +D+A +LF M
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMP 324
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM----------------QSSSVEEM------ 268
RNI SWN++ITG+ Q G +A + F M QS EE
Sbjct: 325 CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE 384
Query: 269 VKPD-----KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
+K D + T LS CA + A++ GK +HG + G +G AL+ MY KCG
Sbjct: 385 IKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGS 444
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
++ A F+ + +KD ++W M++ +A +G+G++A F M+ GV+P+ +T VG+LSA
Sbjct: 445 IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSA 504
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+H+GL+++G F M Y V P HY CMID+L RAG EA+ LIR+MP +P
Sbjct: 505 CSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAA 564
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
WGALLG ++HGN ELGEK A+ + ++P N YV L ++YA +GR+ D K R+ M+
Sbjct: 565 SWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMR 624
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ G++K VPG S VEV +H FS+ KE + L L M+ G+
Sbjct: 625 DIGVQK-VPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGY 675
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 149/341 (43%), Gaps = 64/341 (18%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D+ N IS M G SA +F+ M R VS+NAMI GYLR+ ++A +LF +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM----------------QSSSVEE------- 267
+R++FSWN ++TG+V+ R +A LF M Q+ V+E
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 268 MVKPDKITIASVLSACAYLGAIDHG-------------KW---VHGYLRRSGLDC----- 306
M + + I+ +L+A + G I+ W + G++R+ L
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLF 227
Query: 307 ------DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
D + ++ Y + G + +A +F E P +D WTAM+S + NG EA
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP--HVYHYACMID 418
F EM + N V++ +++ + ++ R F M P ++ + MI
Sbjct: 288 FFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESM-------PCRNISSWNTMIT 336
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ G ++A + MP + D W A++ G G+ E
Sbjct: 337 GYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYE 376
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 158/356 (44%), Gaps = 62/356 (17%)
Query: 46 EIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
+I ++ +S PC + +++IT G ++ A F + + D ++ +I
Sbjct: 314 DIARELFESMPCRNISSWNTMIT------GYGQIGDIAQARKFFDMMPQRDCVSWAAIIA 367
Query: 105 ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVV 164
A H + L ++ ++ G S + TF L C +G ++GQ V
Sbjct: 368 GYA------QSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAV 421
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
K G FV N++++++ CG + A F+ + +DVVSWN M+ GY R
Sbjct: 422 KMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH-------- 473
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
G R+AL +F+ M+++ VKPD+IT+ VLSAC+
Sbjct: 474 -----------------------GFGRQALTVFESMKTAG----VKPDEITMVGVLSACS 506
Query: 285 YLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAW 342
+ G +D G ++ + + G+ T ++D+ G+ G +E A + + MP + +W
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASW 566
Query: 343 TAMISVFALNG---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
A++ ++G G++A + +ME + N +V L + A S GRW
Sbjct: 567 GALLGASRIHGNTELGEKAAEMVFKMEPQ----NSGMYVLLSNLYAAS-----GRW 613
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 115/290 (39%), Gaps = 49/290 (16%)
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG 287
R+K +I WN I+ ++ G AL +F M S
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRS----------------------- 79
Query: 288 AIDHGKWVHGYLRRSGLDC-----------DVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
++ + + GYLR S + D+ ++ Y + + A +F MP+
Sbjct: 80 SVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPE 139
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD ++W +++S +A NGY EA + F M + N +++ GLL+A H+G +E+
Sbjct: 140 KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLL 195
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F L+ + C++ R +A L MP+ D W ++ G G
Sbjct: 196 FESKSDWDLIS-----WNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWNTMISGYAQGG 249
Query: 457 NVELGEKVAQYLIDLDPLNHAF-YVNLCDMYAKAGRFDDVKKTRNLMKER 505
G A+ L D P F + + Y + G D+ K + M E+
Sbjct: 250 ----GLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK 295
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 61/143 (42%), Gaps = 39/143 (27%)
Query: 386 HSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
++GL++ G F M Y V P HY CMID+L R E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
GALLG ++HGN ELGEK AQ + P N + M++
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------SKMRDV 857
Query: 506 GIRKEVPGCSSVEVDGVVHEFSM 528
G++K VPG S EV +H FS+
Sbjct: 858 GVQK-VPGYSWFEVQNKIHTFSV 879
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/376 (39%), Positives = 232/376 (61%), Gaps = 6/376 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DV + N+++ F+ G +TSAR LFDEM+++ V++W MI GY D+D A LF M
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+RN+ SWN++I G+ Q + +E + LFQEMQ+++ + PD +TI SVL A + GA+
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTS---LDPDDVTILSVLPAISDTGALS 291
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G+W H +++R LD V + TA++DMY KCG +E+A +F EMP+K +W AMI +A
Sbjct: 292 LGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYA 351
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
LNG + A D F M E +P+ +T + +++AC H GLVE+GR F +MR + L +
Sbjct: 352 LNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGL-NAKI 409
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+D+L RAG EAE LI +MP EP+ + + L C + ++E E++ + ++
Sbjct: 410 EHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVE 469
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
L+P N YV L ++YA R+DD +N+M++ +KEV GCS +E++ +V EF
Sbjct: 470 LEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEV-GCSLIEINYIVSEFISGD 528
Query: 531 SPKVVKEELVLILNGL 546
+ + + L+L L
Sbjct: 529 TTHPHRRSIHLVLGDL 544
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 156/379 (41%), Gaps = 67/379 (17%)
Query: 203 VVSWNAMIIGYLRSGDLDVALDLF-RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
V+S +A+ IGY R LF +R ++ + F NS+I +++ + ++ L+++++
Sbjct: 18 VISASAVGIGYARK--------LFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLR 69
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
E PD T ++ +C+ + G +H + R G D+ + T +VDMY K
Sbjct: 70 K---ETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKF 126
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + A F EMP + ++WTA+IS + G A F +M + V + ++
Sbjct: 127 GKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMM 183
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
SG + R F M H ++ + MI A +L +MP E +
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHKTVIT-----WTTMIHGYCNIKDIDAARKLFDAMP-ERN 237
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYL---IDLDPLN----------------------H 476
+ W ++GG + + G ++ Q + LDP + H
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 477 AFY--------VNLC----DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
F V +C DMY+K G + K+ I E+P + ++H
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKR---------IFDEMPEKQVASWNAMIH 348
Query: 525 EFSMKGSPKVVKEELVLIL 543
+++ G+ + + V ++
Sbjct: 349 GYALNGNARAALDLFVTMM 367
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 261/477 (54%), Gaps = 43/477 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G+L + VFS +K D ++N MI S + +KL+K M+ T + PD +
Sbjct: 424 GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGS------FDEAMKLFK-MMKTDVKPDSV 476
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T+ LL T+ D +G ++ + K G ++ V N+++ ++ C
Sbjct: 477 TYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC------------- 523
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
G++ +L +F MK R+I +WN+II V L +
Sbjct: 524 ------------------GEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMIS 565
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M++ E V PD T+ S+L C+ L A GK +HG + + GL+ DV +G L++MY
Sbjct: 566 RMRT----EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMY 621
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + ++ VFK M KD + WTA+IS + G GK+A F EMEA G+ P+HV FV
Sbjct: 622 SKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFV 681
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
++ AC+HSGLVE+G F M+ Y +EP + HYAC++D+LSR+ L +AE I SMP+
Sbjct: 682 AIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPL 741
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+PD +WGALL C+M G+ E+ ++V++ +I+L+P + +YV + ++YA G++D V+
Sbjct: 742 KPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSI 801
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R +K RG++K+ PGCS +E+ V+ F EE+ +L L+ +M G+
Sbjct: 802 RKSIKARGLKKD-PGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGY 857
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 234/522 (44%), Gaps = 99/522 (18%)
Query: 26 STKLILR-----NAIDECKNMRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVS 78
STKL R + EC I ++ + S T H HSLI L ++ S
Sbjct: 52 STKLFSRVMKTLRVLHECSRQTLFSSI-SRALASAATTTQLHKLHSLIITLGLHHSVIFS 110
Query: 79 GSL--SYA-----TNVFSHIK----RSDLYTYNIMIRANACKSSETNDTHSG---KCLKL 124
L YA T+ FS + +++Y +N +IRA TH+G + L L
Sbjct: 111 AKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRAL---------THNGLFSEALSL 161
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMA 184
Y + + PD TFP ++ C LD + S++ +V+ G D+++ N++I ++
Sbjct: 162 YSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCR 221
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK-------------- 230
+ AR +F+EM RDVVSWN++I GY +G + AL+++ R +
Sbjct: 222 FNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSV 281
Query: 231 -------------------------KRNIFSWNSIIT------GFVQGGRAREALELFQE 259
K+++ N +++ G + G R + + L
Sbjct: 282 LRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDA 341
Query: 260 MQSSSV----------EEMVK----------PDKITIASVLSACAYLGAIDHGKWVHGYL 299
+ +++ EE +K PD +TI S+L AC +LG ++ GK+VH Y+
Sbjct: 342 VSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYM 401
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
SG +CD L++MY KCG + + VF M KD+++W +MI+V+ NG EA
Sbjct: 402 ITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAM 461
Query: 360 DTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDI 419
F+ M+ + V+P+ VT+V LLS G + G+ + + ++ ++D+
Sbjct: 462 KLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGF-NSNIVVSNTLVDM 519
Query: 420 LSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELG 461
++ G ++ ++ +M D+ W ++ C + LG
Sbjct: 520 YAKCGEMGDSLKVFENMKAR-DIITWNTIIASCVHSEDCNLG 560
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 143/321 (44%), Gaps = 44/321 (13%)
Query: 209 MIIGYLRSGDLDVALDLFRRMK-KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
+I Y D + +FR N++ WNSII G EAL L+ E Q ++
Sbjct: 113 LIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQ- 171
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
PD T SV++ACA L + K +H + G D+ IG AL+DMY + +++A
Sbjct: 172 ---PDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKA 228
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF+EMP +D ++W ++IS + NGY EA + + GV P+ T +L AC
Sbjct: 229 RKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGL 288
Query: 388 GLVEKGR------------------------WC----FVMMRHVY--LVEPHVYHYACMI 417
G VE+G +C + R ++ +V + MI
Sbjct: 289 GSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMI 348
Query: 418 DILSRAGLFSEAERLIRSM--PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI----DL 471
S+ GL+ E+ +L M +PD+ ++L C G++E G+ V Y+I +
Sbjct: 349 CGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 408
Query: 472 DPLNHAFYVNLCDMYAKAGRF 492
D +N MYAK G
Sbjct: 409 DTTASNILIN---MYAKCGNL 426
>gi|345505232|gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
Length = 579
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/453 (36%), Positives = 258/453 (56%), Gaps = 17/453 (3%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANA-CKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
G L +A +F + + D +YN MI C S E+ + + L + + IS +
Sbjct: 136 GCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIES----ASELFDLMPREMKNLISWNS 191
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
L + + ++ +D + + ++ ++ + D+ NS+I ++ G + A+ LFD
Sbjct: 192 LISGY--AQTSEGVD--IASKLFAEMPE----KDLISWNSMIDGYVKHGRIEDAKDLFDM 243
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+ RDVV+W MI GY + G + A LF +M R++ ++NS++ G+VQ EALE+F
Sbjct: 244 VPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEALEIF 303
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+M+ E + PD+ T+ VLSA A LG + +H Y+ +G AL+DM
Sbjct: 304 SDMEK---ESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDM 360
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG ++ A VF+ + K W AMI A++G G+ AFD ++E ++P+ +TF
Sbjct: 361 YSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITF 420
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
VG+L+AC+HSGLV++G CF +MR + +EP + HY CM+DILSR+G A+ LI MP
Sbjct: 421 VGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 480
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+EP+ +W L C H E GE VA++LI N + YV L +MYA G + DV++
Sbjct: 481 IEPNDVIWRTFLTACSHHKEFETGELVAKHLILQADYNPSSYVLLSNMYASFGMWKDVRR 540
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
R +MKER I K +PGCS +E+DG VHEF + G
Sbjct: 541 VRTMMKERKIEK-IPGCSWIELDGXVHEFFVDG 572
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 219/439 (49%), Gaps = 45/439 (10%)
Query: 48 HTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLS-YATNVFSHI----KRSDLYTYNIM 102
H ++IK+ ++ ++ L TR++ A S L+ +A VF + D Y +N M
Sbjct: 2 HARLIKTGIIKNSN---LTTRIVLAFAASPRPYLAEFARFVFHEYHYGGEVEDPYLWNAM 58
Query: 103 IRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLV--GASVY 160
I+ S ++ T + L L+ ML G+ D + ++K C++ G V G ++
Sbjct: 59 IK------SHSHGTDPRRALLLFCLMLEIGVPVDKFSLSLVMKACSRL--GFVKGGLQIH 110
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G + K G+ D+F+QN +I L++ CG + AR +FD M RD VS+N+MI GY++ G ++
Sbjct: 111 GFLKKTGLWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIE 170
Query: 221 VALDLFRRMKK--RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIAS 278
A +LF M + +N+ SWNS+I+G+ Q ++ S EM + D I+ S
Sbjct: 171 SASELFDLMPREMKNLISWNSLISGYAQTSEG-------VDIASKLFAEMPEKDLISWNS 223
Query: 279 VLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKD 338
++ G I+ K + + R DVV ++D Y K G V +A +F +MP +D
Sbjct: 224 MIDGYVKHGRIEDAKDLFDMVPRR----DVVTWATMIDGYAKLGFVHQAKTLFDQMPHRD 279
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+A+ +M++ + N + EA + F +ME E + P+ T V +LSA A G + K
Sbjct: 280 VVAYNSMMAGYVQNRFHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKA---- 335
Query: 398 VMMRHVYLVEPHVYHYA----CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
M H+Y+VE +ID+ S+ G A + + + W A++GG
Sbjct: 336 -MDMHLYIVEKQFLLGGKLGVALIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMIGGLA 393
Query: 454 MHGNVELGEKVAQYLIDLD 472
+HG LGE L+ ++
Sbjct: 394 IHG---LGESAFDMLLQIE 409
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/439 (37%), Positives = 249/439 (56%), Gaps = 23/439 (5%)
Query: 121 CLKLYKQMLC-TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVI 179
L+L+ +M G+ P T +L C + +V+G VVK G+ D+ FVQN+++
Sbjct: 357 ALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALM 416
Query: 180 SLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNS 239
L+ G + +AR +F + RDVVSWN +I G + G + A L R M+++ F+ +
Sbjct: 417 DLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAA 476
Query: 240 IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYL 299
G + + EE V P+ IT+ ++L CA L A GK +HGY
Sbjct: 477 TEDGI-----------------AGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYA 519
Query: 300 RRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAF 359
R LD DV +G+ALVDMY KCGC+ + VF +P+++ + W +I + ++G G EA
Sbjct: 520 VRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAI 579
Query: 360 DTFREMEA-EGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMID 418
F M A + +PN VTF+ L+AC+HSG+V++G F M+ + VEP +AC +D
Sbjct: 580 ALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVD 639
Query: 419 ILSRAGLFSEAERLIRSM-PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHA 477
IL RAG EA R+I SM P E V W + LG C++H NV LGE A+ L +L+P +
Sbjct: 640 ILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEAS 699
Query: 478 FYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKE 537
YV LC++Y+ AG ++ + R+ M++RG+ KE PGCS +E+DGV+H F M G +
Sbjct: 700 HYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKE-PGCSWIELDGVIHRF-MAGESAHPES 757
Query: 538 ELVLI-LNGLSKIMKNGGF 555
LV ++ L + M++ G+
Sbjct: 758 TLVHAHMDALWERMRDQGY 776
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 198/446 (44%), Gaps = 73/446 (16%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL- 96
+++R +E H +K+ L ++ + L + L G + A +F + +D+
Sbjct: 174 AEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARL---GLVDDAQTLFGSVGATDVP 230
Query: 97 ----YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLD 152
T+N M+ S G+ +++ M+ G+ PD +TF L C++
Sbjct: 231 GGGVVTWNTMV------SLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEM 284
Query: 153 GLVGASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFD--EMSNRDVVSWNAM 209
+G ++ V+K + + FV ++++ ++ + V +AR++FD R + WNAM
Sbjct: 285 LSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAM 344
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
I GY ++G LD +ALELF M++ E V
Sbjct: 345 ICGYAQAG-LD------------------------------EDALELFARMET---EAGV 370
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
P + TIA VL +CA + VHGY+ + G+ + + AL+D+Y + G ++ A
Sbjct: 371 VPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARW 430
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG------------------VR 371
+F + +D ++W +I+ + G+ ++AF REM+ +G V
Sbjct: 431 IFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVV 490
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
PN++T + LL CA +G+ +RH ++ V + ++D+ ++ G + +
Sbjct: 491 PNNITLMTLLPGCAMLAAPARGKEIHGYAVRHA--LDSDVAVGSALVDMYAKCGCLALSR 548
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHG 456
+ +P +V W L+ MHG
Sbjct: 549 AVFDRLPRR-NVITWNVLIMAYGMHG 573
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 207 NAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVE 266
NA++ Y R GDL AL LF M R+ ++NS+I R AL+ ++M +
Sbjct: 98 NALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDM----LL 153
Query: 267 EMVKPDKITIASVLSACAYLGA-IDHGKWVHGYLRRSG-LDCDVVIG-TALVDMYGKCGC 323
E T+ SVL AC++L + G+ H + ++G LD D AL+ MY + G
Sbjct: 154 EGHPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGL 213
Query: 324 VERAYGVF-----KEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
V+ A +F ++P + W M+S+ +G EA + +M A GVRP+ VTF
Sbjct: 214 VDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFA 273
Query: 379 GLLSACAHSGLVEKGR 394
L AC+ ++ GR
Sbjct: 274 SALPACSQLEMLSLGR 289
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGY-LRRSGLDCDV-VIGTALVDMYGKCGCVERAYG 329
D+ + + A L ++ + +HG LR LD + AL+ Y +CG + A
Sbjct: 56 DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
+F MP +D + + ++I+ L A D R+M EG T V +L AC+H L
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSH--L 173
Query: 390 VEK---GRWCFVM-MRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
E GR +++ +L + + ++ + +R GL +A+ L S+
Sbjct: 174 AEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSV 224
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/376 (39%), Positives = 232/376 (61%), Gaps = 6/376 (1%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DV + N+++ F+ G +TSAR LFDEM+++ V++W MI GY D+D A LF M
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+RN+ SWN++I G+ Q + +E + LFQEMQ+++ + PD +TI SVL A + GA+
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGITLFQEMQATTS---LDPDDVTILSVLPAISDTGALS 291
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G+W H +++R LD V + TA++DMY KCG +E+A +F EMP+K +W AMI +A
Sbjct: 292 LGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYA 351
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
LNG + A D F M E +P+ +T + +++AC H GLVE+GR F +MR + L +
Sbjct: 352 LNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGL-NAKI 409
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HY CM+D+L RAG EAE LI +MP EP+ + + L C + ++E E++ + ++
Sbjct: 410 EHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVE 469
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
L+P N YV L ++YA R+DD +N+M++ +KEV GCS +E++ +V EF
Sbjct: 470 LEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEV-GCSLIEINYIVSEFISGD 528
Query: 531 SPKVVKEELVLILNGL 546
+ + + L+L L
Sbjct: 529 TTHPHRRSIHLVLGDL 544
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 154/379 (40%), Gaps = 67/379 (17%)
Query: 203 VVSWNAMIIGYLRSGDLDVALDLF-RRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
V+S +A+ IGY R LF +R ++ + F NS+I +++ + ++ L+++++
Sbjct: 18 VISASAVGIGYARK--------LFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLR 69
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
E PD T ++ +C+ + G +H + R G D+ + T +VDMY K
Sbjct: 70 K---ETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKF 126
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + A F EMP + ++WTA+IS + G A F +M + V + ++
Sbjct: 127 GKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMM 183
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
SG + R F M H ++ + MI A +L +MP E +
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHKTVIT-----WTTMIHGYCNIKDIDAARKLFDAMP-ERN 237
Query: 442 VFVWGALLGG-CQ----MHGNVELGEKVAQYLIDLDPLN--------------------H 476
+ W ++GG CQ G E A +D D + H
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGITLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 477 AFY--------VNLC----DMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
F V +C DMY+K G + K+ I E+P + ++H
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKR---------IFDEMPEKQVASWNAMIH 348
Query: 525 EFSMKGSPKVVKEELVLIL 543
+++ G+ + + V ++
Sbjct: 349 GYALNGNARAALDLFVTMM 367
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 235/412 (57%), Gaps = 28/412 (6%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
DVF +++S ++ G + A+ FDEM ++ VS+NAMI GY+++ +D+A +LF M
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMP 324
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM----------------QSSSVEEM------ 268
RNI SWN++ITG+ Q G +A + F M QS EE
Sbjct: 325 CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE 384
Query: 269 VKPD-----KITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
+K D + T LS CA + A++ GK +HG + G +G AL+ MY KCG
Sbjct: 385 IKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGS 444
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
++ A F+ + +KD ++W M++ +A +G+G++A F M+ GV+P+ +T VG+LSA
Sbjct: 445 IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSA 504
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
C+H+GL+++G F M Y V P HY CMID+L RAG EA+ LIR+MP +P
Sbjct: 505 CSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAA 564
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
WGALLG ++HGN ELGEK A+ + ++P N YV L ++YA +GR+ D K R+ M+
Sbjct: 565 SWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMR 624
Query: 504 ERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
+ G++K VPG S VEV +H FS+ KE + L L M+ G+
Sbjct: 625 DIGVQK-VPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGY 675
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 149/341 (43%), Gaps = 64/341 (18%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
D+ N IS M G SA +F+ M R VS+NAMI GYLR+ ++A +LF +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEM----------------QSSSVEE------- 267
+R++FSWN ++TG+V+ R +A LF M Q+ V+E
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 268 MVKPDKITIASVLSACAYLGAIDHG-------------KW---VHGYLRRSGLDC----- 306
M + + I+ +L+A + G I+ W + G++R+ L
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLF 227
Query: 307 ------DVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFD 360
D + ++ Y + G + +A +F E P +D WTAM+S + NG EA
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287
Query: 361 TFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP--HVYHYACMID 418
F EM + N V++ +++ + ++ R F M P ++ + MI
Sbjct: 288 FFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESM-------PCRNISSWNTMIT 336
Query: 419 ILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
+ G ++A + MP + D W A++ G G+ E
Sbjct: 337 GYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYE 376
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 158/356 (44%), Gaps = 62/356 (17%)
Query: 46 EIHTQIIKS-PCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
+I ++ +S PC + +++IT G ++ A F + + D ++ +I
Sbjct: 314 DIARELFESMPCRNISSWNTMIT------GYGQIGDIAQARKFFDMMPQRDCVSWAAIIA 367
Query: 105 ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVV 164
A H + L ++ ++ G S + TF L C +G ++GQ V
Sbjct: 368 GYA------QSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAV 421
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
K G FV N++++++ CG + A F+ + +DVVSWN M+ GY R
Sbjct: 422 KMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH-------- 473
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
G R+AL +F+ M+++ VKPD+IT+ VLSAC+
Sbjct: 474 -----------------------GFGRQALTVFESMKTAG----VKPDEITMVGVLSACS 506
Query: 285 YLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAW 342
+ G +D G ++ + + G+ T ++D+ G+ G +E A + + MP + +W
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASW 566
Query: 343 TAMISVFALNG---YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
A++ ++G G++A + +ME + N +V L + A S GRW
Sbjct: 567 GALLGASRIHGNTELGEKAAEMVFKMEPQ----NSGMYVLLSNLYAAS-----GRW 613
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 115/290 (39%), Gaps = 49/290 (16%)
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG 287
R+K +I WN I+ ++ G AL +F M S
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRS----------------------- 79
Query: 288 AIDHGKWVHGYLRRSGLDC-----------DVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
++ + + GYLR S + D+ ++ Y + + A +F MP+
Sbjct: 80 SVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPE 139
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
KD ++W +++S +A NGY EA + F M + N +++ GLL+A H+G +E+
Sbjct: 140 KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLL 195
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
F L+ + C++ R +A L MP+ D W ++ G G
Sbjct: 196 FESKSDWDLIS-----WNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWNTMISGYAQGG 249
Query: 457 NVELGEKVAQYLIDLDPLNHAF-YVNLCDMYAKAGRFDDVKKTRNLMKER 505
G A+ L D P F + + Y + G D+ K + M E+
Sbjct: 250 ----GLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK 295
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 277/527 (52%), Gaps = 60/527 (11%)
Query: 34 AIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR 93
A++ C ++ +EIH ++ KS L D I L C + G A +F +
Sbjct: 48 AVNSCPSISNCREIHARVFKS--LLYRD--GFIGDQLVTCYNKL-GYAEDALKLFDDMPH 102
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKL-----YKQMLCTGISPDCLTFPFLLKECT 148
DL ++N +I + +CL + Y + P+ +T ++ C
Sbjct: 103 KDLVSWNSLISGFS------------RCLHMSLTAFYTMKFEMSVKPNEVTILSMISACN 150
Query: 149 KRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNA 208
LD G ++G +K G +V V NS+I++
Sbjct: 151 GALDA--GKYIHGFGIKVGGTLEVKVANSLINM--------------------------- 181
Query: 209 MIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEM 268
Y +SGDL A LF + N SWNSII V G ARE ++ F +M+ +E+
Sbjct: 182 ----YGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQ- 236
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
D+ TI ++L AC +LG + +HG + +G + I TAL+D Y K G + +Y
Sbjct: 237 ---DEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASY 293
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
GVF E+ D +AWTAM++ +A +G G+EA F M +G+ P+HVTF LLSAC+HSG
Sbjct: 294 GVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSG 353
Query: 389 LVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
LV +G+ F +M VY +EP V HY+CM+D+L R GL ++A +I++MPMEP+ VWGAL
Sbjct: 354 LVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGAL 413
Query: 449 LGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
LG C++HGN+ELG++VA++LI+++PL+ Y+ L +MY+ + + D K R L+KERG+
Sbjct: 414 LGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGL- 472
Query: 509 KEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
K PG SS+E H F + E++ L L ++ G+
Sbjct: 473 KRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGY 519
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 237 WNS-IITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
WNS I+ F R + L L + V + P+ I ++++L A +I + + +
Sbjct: 5 WNSSILYNFFIQSRTQYPLLLHRSFHL--VRQCATPEAI-VSALLIAVNSCPSISNCREI 61
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
H + +S L D IG LV Y K G E A +F +MP KD ++W ++IS F+ +
Sbjct: 62 HARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLH- 120
Query: 356 KEAFDTFREMEAE-GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHV-YLVEPHVYHY 413
+ F M+ E V+PN VT + ++SAC +G ++ G++ V +E V +
Sbjct: 121 -MSLTAFYTMKFEMSVKPNEVTILSMISAC--NGALDAGKYIHGFGIKVGGTLEVKVAN- 176
Query: 414 ACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG-----GCQMHG 456
+I++ ++G + A RL ++P +P+ W +++ GC G
Sbjct: 177 -SLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAAQVTNGCAREG 222
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 275/513 (53%), Gaps = 18/513 (3%)
Query: 45 KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIR 104
K++H IIK+ Q + + + C L + A N+F+ + D ++ ++
Sbjct: 23 KKLHCHIIKTGIDQCKSLSNNLINMYGKCGL-----IQDALNLFNQLPHRDPISWASILT 77
Query: 105 ANACKSSETNDTHSGKCL--KLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQ 162
AN ++ N H + ++KQ G+ PD F L+K C G V+
Sbjct: 78 AN----NQANLPHLTLSMFPAMFKQ---DGLQPDHYVFACLVKACAILGAMKQGKQVHAT 130
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
+ V DD V++S++ ++ CG R++FD +S+++ +SW AMI GY +SG A
Sbjct: 131 FIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDA 190
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
+ LF++M +N+ SW ++I+G VQ G ++ LF EM+S ++ + D ++S++ A
Sbjct: 191 IQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIV---DPFILSSIIGA 247
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
A L + GK +H + G + + + ALVDMY KC V A +F M ++D ++W
Sbjct: 248 SANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSW 307
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
T++I A +G +EA + M + G++PN VTFVGL+ AC+H GLV KGR+ F M
Sbjct: 308 TSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIK 367
Query: 403 VYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGE 462
Y + P + HY C++D+LSR+G EAE LI++MP +PD W ALL C H N +G
Sbjct: 368 DYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGI 427
Query: 463 KVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGV 522
+VA +L+ L P + + Y+ L ++YA A ++ V K R LM ++KE PG S + +
Sbjct: 428 RVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKE-PGYSCIVLGKE 486
Query: 523 VHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
F + KEE+ +L L MK G+
Sbjct: 487 SQVFLAGETSHPAKEEIFGLLEELDAEMKKRGY 519
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 160/372 (43%), Gaps = 81/372 (21%)
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
+ L+ C + +G ++ ++K G+ + N++I+++ CG + A LF+++ +R
Sbjct: 8 YQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHR 67
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
D +SW SI+T Q L +F M
Sbjct: 68 DPISW-------------------------------ASILTANNQANLPHLTLSMFPAMF 96
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
++ ++PD A ++ ACA LGA+ GK VH S + D V+ ++LVDMY KC
Sbjct: 97 K---QDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKC 153
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + VF + K++++WTAMIS +A +G +A F++M + N +++ L+
Sbjct: 154 GLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVK----NLLSWTALI 209
Query: 382 SACAHSGLVEKGRWC-----FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
SGLV+ G W F+ MR + IDI+
Sbjct: 210 -----SGLVQSGNWVDSFYLFMEMR------------SKGIDIV---------------- 236
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDV 495
D F+ +++G + LG+++ +I L + F N L DMYAK
Sbjct: 237 ----DPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAA 292
Query: 496 KKTRNLMKERGI 507
KK M +R I
Sbjct: 293 KKIFGRMVQRDI 304
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 258/478 (53%), Gaps = 43/478 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A F+ + D+ T+N +I A + D ++ + ++ ++ + I+PD
Sbjct: 479 GFFTAALTTFNRMSSRDIVTWNSLINGYA----QIGDPYNA--IDMFYKLRLSAINPDAG 532
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T ++ C D G ++G +VK G D V+N++I ++ CG + SA LF++
Sbjct: 533 TMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKT 592
Query: 199 S-NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+D V+ WN II ++Q G A+EA+ F
Sbjct: 593 DFTKDEVT-------------------------------WNVIIAAYMQNGHAKEAISSF 621
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+M+ E P+ +T SVL A AYL A G H + + G + ++G +L+DM
Sbjct: 622 HQMRL----ENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDM 677
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG ++ + +F EM KDT++W AM+S +A++G+G A F M+ V+ + V+F
Sbjct: 678 YAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSF 737
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V +LSAC H+GLVE+GR F M Y ++P + HYACM+D+L RAGLF E I+ MP
Sbjct: 738 VSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMP 797
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+EPD VWGALLG C+MH NV+LGE +L+ L+P N A +V L +YA++GR+ D K
Sbjct: 798 VEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGK 857
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R+ M + G++K PGCS VE+ VH F + E + L+ N L + M+ G+
Sbjct: 858 ARSKMNDLGLKK-TPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGY 914
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 222/489 (45%), Gaps = 82/489 (16%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ CK++ L +IH QII S HH IT L+ +L L A +VF
Sbjct: 39 LSSCKHLNPLLQIHAQIIVSGF----KHHHSITHLINLYSLFHKCDL--ARSVFDSTPNP 92
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+N MIRA +S + N+ L++Y M+ G+ PD TF F+LK CT L+
Sbjct: 93 SRILWNSMIRAYT-RSKQYNEA-----LEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQ 146
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G +G++ + G+ DVF+ ++ ++ G + AR +FD+M RDVV+WNAMI G
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLS 206
Query: 215 RSGDLDVALDLFRRMKK--------------------------RNIFSW----------- 237
+S D A+D FR M+ R+I +
Sbjct: 207 QSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS 266
Query: 238 NSIITGFVQGGRAREALELFQEMQSSS-----------------VEEMVKPDK-----IT 275
N +I + + G A +F +M VE + DK +
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 276 IASVLSACAYLGA-----IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
I V + A+L A ++ GK +HG + +D D+++ T L+ MY KCG E+A +
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F + +D +AW+A+I+ GY +EA F+EM+ + ++PN VT + +L ACA L+
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 391 EKGR--WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+ G+ CF + ++ + ++ + ++ G F+ A M D+ W +L
Sbjct: 447 KLGKSIHCFTVKAD---MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSL 502
Query: 449 LGGCQMHGN 457
+ G G+
Sbjct: 503 INGYAQIGD 511
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 178/383 (46%), Gaps = 50/383 (13%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G A +F ++ DL ++ +I A + + L L+++M + P+ +
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAA------LVQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C +G S++ VK + D+ +++S++ CGF T+A F+ M
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
S+RD+V+WN++I GY + GD A+D+F +++ I
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAI------------------------ 527
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
PD T+ V+ ACA L +D G +HG + + G + D + AL+DMY
Sbjct: 528 -----------NPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576
Query: 319 GKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
KCG + A +F + KD + W +I+ + NG+ KEA +F +M E PN VTF
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 636
Query: 378 VGLLSACAHSGLVEKG---RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
V +L A A+ +G C + M +L V + +ID+ ++ G +E+L
Sbjct: 637 VSVLPAAAYLAAFREGMAFHACIIQMG--FLSNTLVGN--SLIDMYAKCGQLDYSEKLFN 692
Query: 435 SMPMEPDVFVWGALLGGCQMHGN 457
M + D W A+L G +HG+
Sbjct: 693 EMDHK-DTVSWNAMLSGYAVHGH 714
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 139/262 (53%), Gaps = 9/262 (3%)
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+ D++ +++ Y + G+ + A LF ++ R++ +W++II VQ G EAL LFQE
Sbjct: 361 DSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
MQ+ + +KP+++T+ S+L ACA L + GK +H + ++ +D D+ GTALV MY
Sbjct: 421 MQN----QKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYA 476
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG A F M +D + W ++I+ +A G A D F ++ + P+ T VG
Sbjct: 477 KCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVG 536
Query: 380 LLSACAHSGLVEKGRWCF--VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
++ ACA +++G C ++++ + + HV + +ID+ ++ G AE L
Sbjct: 537 VVPACALLNDLDQGT-CIHGLIVKLGFESDCHVKN--ALIDMYAKCGSLPSAEFLFNKTD 593
Query: 438 MEPDVFVWGALLGGCQMHGNVE 459
D W ++ +G+ +
Sbjct: 594 FTKDEVTWNVIIAAYMQNGHAK 615
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/435 (36%), Positives = 251/435 (57%), Gaps = 40/435 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G L A VF ++ DL ++N +I A E ND L +K+ML G+ PD L
Sbjct: 297 GRLQDAQRVFDGMEVRDLVSWNSIIAA-----YEQNDD-PVTALGFFKEMLFVGMRPDLL 350
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T L AS++GQ+ + V GFV R L
Sbjct: 351 TVVSL-------------ASIFGQLSDRRIGRAVH------------GFVVRCRWL---- 381
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D+V NA++ Y + G +D A +F ++ R++ SWN++ITG+ Q G A EA++ +
Sbjct: 382 -EVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYN 440
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M+ + P++ T S+L A +++GA+ G +HG L ++ L DV + T L+DMY
Sbjct: 441 MMEEG---RTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMY 497
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
GKCG +E A +F E+P++ ++ W A+IS ++G+G++A F++M A+GV+ +H+TFV
Sbjct: 498 GKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFV 557
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
LLSAC+HSGLV++ +WCF M+ Y ++P++ HY CM+D+ RAG +A L+ +MP+
Sbjct: 558 SLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPI 617
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+ D +WG LL C++HGN ELG + L+++D N +YV L ++YA G+++ K
Sbjct: 618 QADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKV 677
Query: 499 RNLMKERGIRKEVPG 513
R+L ++RG+RK PG
Sbjct: 678 RSLARDRGLRK-TPG 691
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 147/543 (27%), Positives = 252/543 (46%), Gaps = 98/543 (18%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C N+ K++H ++ L L+T+L+ A G LS ++ F HI+R +++
Sbjct: 61 CTNINVAKQLHALLL---VLGKAQDVVLLTQLVTLYA--TLGDLSLSSTTFKHIQRKNIF 115
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
++N M+ A + + S C+ + + +G+ PD TFP +LK C DG
Sbjct: 116 SWNSMVSAYVRRGRYRD---SMDCVT--ELLSLSGVRPDFYTFPPVLKACLSLADG---E 167
Query: 158 SVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSG 217
++ V+K G DV+V S+I L+ G V A +F +M RDV SWNAMI G+ ++G
Sbjct: 168 KMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNG 227
Query: 218 DLDVALDLFRRMK---------------------------------------KRNIFSWN 238
++ AL + RMK + ++F N
Sbjct: 228 NVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSN 287
Query: 239 SIITGFVQGGRAREALELFQEMQSSSV-----------------------EEMV----KP 271
++I + + GR ++A +F M+ + +EM+ +P
Sbjct: 288 ALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRP 347
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRR-SGLDCDVVIGTALVDMYGKCGCVERAYGV 330
D +T+ S+ S L G+ VHG++ R L+ D+VIG ALV+MY K G ++ A V
Sbjct: 348 DLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAV 407
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGL 389
F+++P +D ++W +I+ +A NG EA D + M E + PN T+V +L A +H G
Sbjct: 408 FEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGA 467
Query: 390 VEKGRWCFVMMRHVYLVEP----HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVW 445
+++G M H L++ V+ C+ID+ + G +A L +P E V W
Sbjct: 468 LQQG-----MKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSV-PW 521
Query: 446 GALLGGCQMHGNVELGEKVAQYLIDLDP----LNHAFYVNLCDMYAKAGRFDDVKKTRNL 501
A++ +HG+ GEK Q D+ +H +V+L + +G D+ + +
Sbjct: 522 NAIISSLGIHGH---GEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDT 578
Query: 502 MKE 504
M++
Sbjct: 579 MQK 581
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 150/285 (52%), Gaps = 20/285 (7%)
Query: 181 LFMACGFVTSARMLFDEM----SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFS 236
+F +C + A+ L + +DVV ++ Y GDL ++ F+ ++++NIFS
Sbjct: 57 VFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFS 116
Query: 237 WNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH 296
WNS+++ +V+ GR R++++ E+ S S V+PD T VL AC L G+ +H
Sbjct: 117 WNSMVSAYVRRGRYRDSMDCVTELLSLS---GVRPDFYTFPPVLKACLSLA---DGEKMH 170
Query: 297 GYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGK 356
++ + G + DV + +L+ +Y + G VE A+ VF +MP +D +W AMIS F NG
Sbjct: 171 CWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230
Query: 357 EAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLV----EPHVYH 412
EA M+ E V+ + VT +L CA S V G ++ H+Y++ E V+
Sbjct: 231 EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGG-----VLVHLYVIKHGLESDVFV 285
Query: 413 YACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
+I++ S+ G +A+R+ M + D+ W +++ + + +
Sbjct: 286 SNALINMYSKFGRLQDAQRVFDGMEVR-DLVSWNSIIAAYEQNDD 329
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 289 IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISV 348
I+ K +H L G DVV+ T LV +Y G + + FK + +K+ +W +M+S
Sbjct: 64 INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSA 123
Query: 349 FALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
+ G +++ D E+ GVRP+ TF +L AC EK C+V+ E
Sbjct: 124 YVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMH-CWVLKMGF---E 179
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV--------- 458
VY A +I + SR G A ++ MP+ DV W A++ G +GNV
Sbjct: 180 HDVYVAASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMISGFCQNGNVAEALRVLDR 238
Query: 459 ---------------------ELGEKVAQYLIDLDPLNHA-----FYVN-LCDMYAKAGR 491
+ + V L+ L + H F N L +MY+K GR
Sbjct: 239 MKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGR 298
Query: 492 FDDVKKTRNLMKERGI 507
D ++ + M+ R +
Sbjct: 299 LQDAQRVFDGMEVRDL 314
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/512 (33%), Positives = 272/512 (53%), Gaps = 17/512 (3%)
Query: 46 EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA 105
E+H+QIIK+ D SL++ L G + A +F + D ++ ++ A
Sbjct: 24 ELHSQIIKA----GFDKSSLLSNTLLD-VYGKCGLIPQALQLFDEMPNRDHVSWASILTA 78
Query: 106 NACKSSETNDTHSGKCLKLYKQMLC-TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVV 164
+ + L + M G+ PD F +++ C+ +G V+ + +
Sbjct: 79 H------NKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFM 132
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
CDD V++S+I ++ CG AR +FD + ++ VSW +MI GY RSG A+D
Sbjct: 133 LSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD 192
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
LF + RN+FSW ++I+G +Q G + LF EM+ ++ + D + ++SV+ CA
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIV---DPLVLSSVVGGCA 249
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
L ++ GK +HG + G + + I ALVDMY KC + A +F MP+KD ++WT+
Sbjct: 250 NLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTS 309
Query: 345 MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
+I A +G +EA + EM ++PN VTFVGLL AC+H+GLV +GR F M Y
Sbjct: 310 IIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDY 369
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
+ P + HY C++D+LSR+G EAE L+ +P +PD W +LL C H N+E+G ++
Sbjct: 370 SINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRI 429
Query: 465 AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
A ++DL P + + Y+ L ++YA A + V K R LM +RKE PG SS++
Sbjct: 430 ADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKE-PGYSSIDFGKDSQ 488
Query: 525 EFSMKGS-PKVVKEELVLILNGLSKIMKNGGF 555
F S +K E+ +L L M+ G+
Sbjct: 489 VFHAGESCDHPMKNEICNLLKDLDAEMRKRGY 520
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 165/386 (42%), Gaps = 75/386 (19%)
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
F L+ C +R ++ Q++K G + N+++ ++ CG + A LFDEM
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
NRD V SW SI+T + R L +
Sbjct: 66 NRDHV-------------------------------SWASILTAHNKALIPRRTLSMLNT 94
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M + + ++PD A ++ AC+ LG + GK VH S D V+ ++L+DMY
Sbjct: 95 MFT---HDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYT 151
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG + A VF + K++++WT+MIS +A +G EA D F + N ++
Sbjct: 152 KCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVR----NLFSWTA 207
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
L+ SGL++ G +Y ++ LF+E R +
Sbjct: 208 LI-----SGLIQSGH--------------GIYSFS----------LFNEMRREGIDI--- 235
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKT 498
D V +++GGC +ELG+++ +I L + F N L DMYAK D+
Sbjct: 236 VDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS---DILAA 292
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVH 524
+++ R RK+V +S+ V H
Sbjct: 293 KDIFY-RMPRKDVISWTSIIVGTAQH 317
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 238/423 (56%), Gaps = 11/423 (2%)
Query: 124 LYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFM 183
L+ +ML I P+ TF ++ T + +G ++ + +K G+ VFV ++++ +
Sbjct: 86 LFSRMLLLNIKPNEFTFATVIHSSTGLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYA 145
Query: 184 ACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG 243
AR F+++ +VVS+ +I GYL+ G +D AL LF+ M +RN+ SWN+++ G
Sbjct: 146 KLCSFEEARNAFEDIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGG 205
Query: 244 FVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSG 303
F Q G EA+ LF EM + E P++ T +++ A + ++ GK H +S
Sbjct: 206 FSQMGHNEEAVSLFIEM----LREGFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSL 261
Query: 304 LDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFR 363
DV + +LV Y KCG +E + VF E+P ++T++W A+I FA NG G++A F
Sbjct: 262 CTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDAVIFFE 321
Query: 364 EMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVY---HYACMIDIL 420
M A G+RPN VT +GLL AC H+GLVEKG F MR EP + HYACM+D+L
Sbjct: 322 RMRAAGLRPNSVTLLGLLCACNHAGLVEKGYMYFNQMRQ---EEPGILKPEHYACMVDLL 378
Query: 421 SRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYV 480
SR G EA + + +P +P W ALLGGC +H N EL + AQ ++ LDP + + YV
Sbjct: 379 SRFGRLKEAAKFLHDLPFDPGTGFWKALLGGCHIHSNAELSDLAAQKILALDPEDVSSYV 438
Query: 481 NLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELV 540
L + Y+ AGR+ V R MKE+G+ K +PGCS +EV +H F KEE+
Sbjct: 439 MLSNAYSAAGRWQQVSTIRREMKEKGL-KRIPGCSWIEVRSKIHVFLNSDKNHHQKEEIY 497
Query: 541 LIL 543
L
Sbjct: 498 SFL 500
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 37/267 (13%)
Query: 224 DLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSAC 283
+LF M + ++ S ++I F + R EA+ LF M + +KP++ T A+V+ +
Sbjct: 54 ELFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLN----IKPNEFTFATVIHSS 109
Query: 284 AYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC---------------------- 321
L I GK +H + GL+ V +G+A++D Y K
Sbjct: 110 TGLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYT 169
Query: 322 ---------GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
G ++ A +F+EMP+++ ++W AM+ F+ G+ +EA F EM EG P
Sbjct: 170 TLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMP 229
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
N TF +++ A+ + G+ F L V+ ++ ++ G ++ +
Sbjct: 230 NQSTFPCAITSAANMASLGMGK-SFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLV 288
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVE 459
+P + + W A++ G +G E
Sbjct: 289 FNELP-DRNTVSWNAVICGFAQNGRGE 314
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 117/270 (43%), Gaps = 43/270 (15%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A +F + ++ ++N M+ + H+ + + L+ +ML G P+
Sbjct: 179 GKIDDALQLFQEMPERNVVSWNAMV------GGFSQMGHNEEAVSLFIEMLREGFMPNQS 232
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
TFP + +G S + VK DVFV NS++S + CG + + ++F+E+
Sbjct: 233 TFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNEL 292
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+R+ VSWNA+I G+ Q GR +A+ F+
Sbjct: 293 PDRNTVSWNAVICGF-------------------------------AQNGRGEDAVIFFE 321
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTA-LVDM 317
M+++ ++P+ +T+ +L AC + G ++ G +R+ A +VD+
Sbjct: 322 RMRAAG----LRPNSVTLLGLLCACNHAGLVEKGYMYFNQMRQEEPGILKPEHYACMVDL 377
Query: 318 YGKCGCVERAYGVFKEMP-KKDTLAWTAMI 346
+ G ++ A ++P T W A++
Sbjct: 378 LSRFGRLKEAAKFLHDLPFDPGTGFWKALL 407
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 253/477 (53%), Gaps = 42/477 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS+ A VF + ++ ++N MI A + S + + +ML G+ P +
Sbjct: 292 GSVRSARLVFKGMSSRNVVSWNTMIDGYA------QNGESEEAFATFLKMLDEGVEPTNV 345
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+ L C D G V+ + + + DV V NS+IS++ C V
Sbjct: 346 SMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRV---------- 395
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
D+A +F +K + + +WN++I G+ Q G EAL LF
Sbjct: 396 ---------------------DIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFC 434
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EMQS + KPD T+ SV++A A L KW+HG R+ +D +V + TAL+D +
Sbjct: 435 EMQSHDI----KPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTH 490
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG ++ A +F M ++ + W AMI + NG+G+EA D F EM+ V+PN +TF+
Sbjct: 491 AKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFL 550
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+++AC+HSGLVE+G + F M+ Y +EP + HY M+D+L RAG +A + I+ MP+
Sbjct: 551 SVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPV 610
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+P + V GA+LG C++H NVELGEK A L DLDP + ++V L +MYA A +D V +
Sbjct: 611 KPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARV 670
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R M+++GI+K PGCS VE+ VH F + + + L L MK G+
Sbjct: 671 RTAMEKKGIQK-TPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGY 726
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 188/362 (51%), Gaps = 48/362 (13%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLL-FFCALSVSGSLSYATNVFSHIKR 93
++ C +++EL +I IIK+ + H T+L+ FC + S++ A VF ++
Sbjct: 51 LELCTSLKELHQILPLIIKNGFY---NEHLFQTKLISLFCKFN---SITEAARVFEPVEH 104
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
Y+ M++ A K+S D ++ Y++M C + P F +LL+ + LD
Sbjct: 105 KLDVLYHTMLKGYA-KNSTLRD-----AVRFYERMRCDEVMPVVYDFTYLLQLSGENLDL 158
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G ++G V+ G ++F +V++L+ C R + D
Sbjct: 159 RRGREIHGMVITNGFQSNLFAMTAVVNLYAKC------RQIED----------------- 195
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
A +F RM +R++ SWN+++ G+ Q G AR A+++ +MQ E KPD
Sbjct: 196 --------AYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQ----EAGQKPDS 243
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
IT+ SVL A A L A+ G+ +HGY R+G + V + TA++D Y KCG V A VFK
Sbjct: 244 ITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKG 303
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M ++ ++W MI +A NG +EAF TF +M EGV P +V+ +G L ACA+ G +E+G
Sbjct: 304 MSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERG 363
Query: 394 RW 395
R+
Sbjct: 364 RY 365
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 189/421 (44%), Gaps = 48/421 (11%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
E ++R +EIH +I + + + L C + A +F + + DL
Sbjct: 154 ENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCR-----QIEDAYKMFERMPQRDL 208
Query: 97 YTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
++N ++ A + + + +++ QM G PD +T +L +G
Sbjct: 209 VSWNTVVAGYA------QNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIG 262
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
S++G + G V V +++ + CG V SAR++F MS+R+VVSWN MI GY
Sbjct: 263 RSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGY--- 319
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
Q G + EA F +M ++E V+P +++
Sbjct: 320 ----------------------------AQNGESEEAFATFLKM----LDEGVEPTNVSM 347
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
L ACA LG ++ G++VH L + DV + +L+ MY KC V+ A VF +
Sbjct: 348 MGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKH 407
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC 396
K + W AMI +A NG EA + F EM++ ++P+ T V +++A A + + +W
Sbjct: 408 KTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWI 467
Query: 397 FVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ L++ +V+ +ID ++ G A +L M E V W A++ G +G
Sbjct: 468 HGLAIRT-LMDKNVFVCTALIDTHAKCGAIQTARKLFDLM-QERHVITWNAMIDGYGTNG 525
Query: 457 N 457
+
Sbjct: 526 H 526
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 134/314 (42%), Gaps = 47/314 (14%)
Query: 163 VVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVA 222
++K G ++ Q +ISLF +T A +F+ + ++ V ++ M+ GY ++ L
Sbjct: 67 IIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTL--- 123
Query: 223 LDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSA 282
R+A+ ++ M+ V +V +L
Sbjct: 124 ----------------------------RDAVRFYERMRCDEVMPVV----YDFTYLLQL 151
Query: 283 CAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAW 342
+ G+ +HG + +G ++ TA+V++Y KC +E AY +F+ MP++D ++W
Sbjct: 152 SGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSW 211
Query: 343 TAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRH 402
+++ +A NG+ + A +M+ G +P+ +T V +L A A + GR H
Sbjct: 212 NTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSI-----H 266
Query: 403 VYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
Y E V M+D + G A + + M +V W ++ G +G
Sbjct: 267 GYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSR-NVVSWNTMIDGYAQNGES 325
Query: 459 ELGEKVAQYLIDLD 472
E E A +L LD
Sbjct: 326 E--EAFATFLKMLD 337
>gi|345505214|gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
Length = 612
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 179/508 (35%), Positives = 277/508 (54%), Gaps = 25/508 (4%)
Query: 21 PPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGS 80
P +K S L L+ A ++E ++H +IK+ + + L C G
Sbjct: 125 PVDKFSFSLALK-ACSRLGFVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKC-----GC 178
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRAN-ACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
L +A VF + + D +YN MI C E+ +G+ L + + +T
Sbjct: 179 LGFARQVFDRMPQRDSVSYNSMIDGYLKCGLVES----AGELFGLMPRE-----KRNLIT 229
Query: 140 FPFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
+ ++ +R DG+ V A ++ ++ + D+ NS+I ++ G + A+ LFD M
Sbjct: 230 WNSMIGGYAQRADGVNVAAKLFDEMPE----KDLISWNSMIGGYVKHGRIEDAKGLFDVM 285
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
RDVV+W MI GY + G + A LF +M R++ +NS+++G VQ EALE+F
Sbjct: 286 PRRDVVTWAIMIDGYGKLGLVHEAKTLFDQMPHRDVVVYNSMMSGXVQNRYHMEALEVFN 345
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M+ E + PD+ ++ VLSA A LG + +H Y+ +G AL+DMY
Sbjct: 346 HMEK---ESHLTPDETSLVIVLSAXAQLGRLSKAIDMHLYIVEKQFPSSGKLGVALIDMY 402
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG ++ A VF+ + K W AMI A++G G+ AFD ++E ++P+H+TFV
Sbjct: 403 SKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFV 462
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
G+L+AC+HSGLV++G CF +MR + +EP + HY CM+DIL+R+G A+ LI MP+
Sbjct: 463 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIELAKNLIEGMPI 522
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
EP+ +W L C H E GE VA++LI N + YV L +MYA G + DV++
Sbjct: 523 EPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASNGMWKDVRRV 582
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEF 526
R +MKE+ I K +PGCS +E+DG VHEF
Sbjct: 583 RTMMKEKNIEK-IPGCSWIELDGRVHEF 609
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 225/458 (49%), Gaps = 55/458 (12%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL-------SYATNVF-- 88
CK +L ++H ++I + ++ D L TR++ A + + + +A VF
Sbjct: 25 CKTSHDLNKLHARLITTGLIKNPD---LTTRIVLAFASASASASSRRPFLAEFARCVFHE 81
Query: 89 SHIKRS----DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLL 144
H+ S D + +N++I+ S ++ K L L ML G+ D +F L
Sbjct: 82 HHVSSSGEVEDPFLWNVVIK------SHSHGVDPRKALFLLCLMLENGVPVDKFSFSLAL 135
Query: 145 KECTKRLDGLV--GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
K C++ G V G V+G ++K G D+F+QN +I L++ CG + AR +FD M RD
Sbjct: 136 KACSRL--GFVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGCLGFARQVFDRMPQRD 193
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRM--KKRNIFSWNSIITGFVQGGRARE-ALELFQE 259
VS+N+MI GYL+ G ++ A +LF M +KRN+ +WNS+I G+ Q A +LF
Sbjct: 194 SVSYNSMIDGYLKCGLVESAGELFGLMPREKRNLITWNSMIGGYAQRADGVNVAAKLF-- 251
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
+EM + D I+ S++ G I+ K + + R DVV ++D YG
Sbjct: 252 ------DEMPEKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRR----DVVTWAIMIDGYG 301
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEG-VRPNHVTFV 378
K G V A +F +MP +D + + +M+S N Y EA + F ME E + P+ + V
Sbjct: 302 KLGLVHEAKTLFDQMPHRDVVVYNSMMSGXVQNRYHMEALEVFNHMEKESHLTPDETSLV 361
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYA----CMIDILSRAGLFSEAERLIR 434
+LSA A G + K + H+Y+VE +ID+ S+ G A R+
Sbjct: 362 IVLSAXAQLGRLSKA-----IDMHLYIVEKQFPSSGKLGVALIDMYSKCGSIQHAMRVFE 416
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLD 472
+ + + W A++GG +HG LGE L+ ++
Sbjct: 417 GIESK-SIDHWNAMIGGLAVHG---LGESAFDMLLQIE 450
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 290/532 (54%), Gaps = 50/532 (9%)
Query: 22 PNKESTKLILRNAID-ECKNMRELKEIHTQIIKSPCLQTNDHHSLIT-RLLFFCALSVSG 79
P+ + TKLI + + C ++ + K+ H ++++ L H+ L + +L+ F ALS SG
Sbjct: 4 PSSKCTKLISVDFLKTHCTSISKTKQAHALLLRTHLL----HNPLFSSKLISFLALSHSG 59
Query: 80 SLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLT 139
L+YA +F+ ++ D + N MIR A + + + LY M+ G+ D T
Sbjct: 60 DLNYARKLFTQMQNPDPFICNTMIRGYA------RSQNPYEAVSLYYFMVERGVPVDNYT 113
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
+PF+L C + +G + +V+K G D+FV N++I + CG
Sbjct: 114 YPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCG------------- 160
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
A D+F R++ +WN +I + G + +A +L E
Sbjct: 161 ------------------SFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDE 202
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGY---LRRSGLDCDVVIGTALVD 316
M + ++PD++T+ S++ ACA LG ++ GK++H Y L + ++CD+V+ TALVD
Sbjct: 203 MTKL---DNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVD 259
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY KCG ++ A VF+ M ++ W A+I A++G+G++A F +ME + + P+ VT
Sbjct: 260 MYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVT 319
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
F+ LL AC+H+GLV++G F M++ + +EP + HY C++D+L RA +A I +M
Sbjct: 320 FIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENM 379
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
P++ + +W LLG C+ G+ +L EK+ + +I+L+P + YV L ++YA ++D
Sbjct: 380 PIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHAL 439
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSK 548
K R MK +GI K PGCS +E++G++H+F + E++ ++ +++
Sbjct: 440 KLRKQMKNKGIEK-TPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTR 490
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/477 (34%), Positives = 261/477 (54%), Gaps = 43/477 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G+L + VFS +K D ++N MI S + +KL+K M+ T + PD +
Sbjct: 365 GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGS------FDEAMKLFK-MMKTDVKPDSV 417
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T+ LL T+ D +G ++ + K G ++ V N+++ ++ C
Sbjct: 418 TYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC------------- 464
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
G++ +L +F MK R+I +WN+II V L +
Sbjct: 465 ------------------GEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMIS 506
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M++ E V PD T+ S+L C+ L A GK +HG + + GL+ DV +G L++MY
Sbjct: 507 RMRT----EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMY 562
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
KCG + ++ VFK M KD + WTA+IS + G GK+A F EMEA G+ P+HV FV
Sbjct: 563 SKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFV 622
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
++ AC+HSGLVE+G F M+ Y +EP + HYAC++D+LSR+ L +AE I SMP+
Sbjct: 623 AIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPL 682
Query: 439 EPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKT 498
+PD +WGALL C+M G+ E+ E+V++ +I+L+P + +YV + ++YA G++D V+
Sbjct: 683 KPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSI 742
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R +K RG++K+ PGCS +E+ V+ F EE+ +L L+ +M G+
Sbjct: 743 RKSIKARGLKKD-PGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGY 798
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 225/500 (45%), Gaps = 86/500 (17%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
+ A+ +L ++H+ II HHS+I + + + +VF
Sbjct: 19 ISRALASAATTTQLHKLHSLII-----TLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRL 73
Query: 91 IKRSD-LYTYNIMIRANACKSSETNDTHSG---KCLKLYKQMLCTGISPDCLTFPFLLKE 146
S+ +Y +N +IRA TH+G + L LY + + PD TFP ++
Sbjct: 74 ASPSNNVYLWNSIIRAL---------THNGLFSEALSLYSETQRIRLQPDTYTFPSVINA 124
Query: 147 CTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSW 206
C LD + S++ +V+ G D+++ N++I ++ + AR +F+EM RDVVSW
Sbjct: 125 CAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSW 184
Query: 207 NAMIIGYLRSGDLDVALDLFRRMK------------------------------------ 230
N++I GY +G + AL+++ R +
Sbjct: 185 NSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEK 244
Query: 231 ---KRNIFSWNSIIT------GFVQGGRAREALELFQEMQSSSV----------EEMVK- 270
K+++ N +++ G + G R + + L + +++ EE +K
Sbjct: 245 IGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKL 304
Query: 271 ---------PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
PD +TI S+L AC +LG ++ GK+VH Y+ SG +CD L++MY KC
Sbjct: 305 FMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKC 364
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G + + VF M KD+++W +MI+V+ NG EA F+ M+ + V+P+ VT+V LL
Sbjct: 365 GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLL 423
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
S G + G+ + + ++ ++D+ ++ G ++ ++ +M D
Sbjct: 424 SMSTQLGDLHLGKELHCDLAKMGF-NSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-D 481
Query: 442 VFVWGALLGGCQMHGNVELG 461
+ W ++ C + LG
Sbjct: 482 IITWNTIIASCVHSEDCNLG 501
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 143/321 (44%), Gaps = 44/321 (13%)
Query: 209 MIIGYLRSGDLDVALDLFRRMK-KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
+I Y D + +FR N++ WNSII G EAL L+ E Q ++
Sbjct: 54 LIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQ- 112
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
PD T SV++ACA L + K +H + G D+ IG AL+DMY + +++A
Sbjct: 113 ---PDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKA 169
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
VF+EMP +D ++W ++IS + NGY EA + + GV P+ T +L AC
Sbjct: 170 RKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGL 229
Query: 388 GLVEKGR------------------------WC----FVMMRHVY--LVEPHVYHYACMI 417
G VE+G +C + R ++ +V + MI
Sbjct: 230 GSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMI 289
Query: 418 DILSRAGLFSEAERLIRSM--PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI----DL 471
S+ GL+ E+ +L M +PD+ ++L C G++E G+ V Y+I +
Sbjct: 290 CGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 349
Query: 472 DPLNHAFYVNLCDMYAKAGRF 492
D +N MYAK G
Sbjct: 350 DTTASNILIN---MYAKCGNL 367
>gi|354805230|gb|AER41645.1| CRR4 [Oryza punctata]
Length = 632
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/388 (39%), Positives = 226/388 (58%), Gaps = 4/388 (1%)
Query: 176 NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIF 235
N +IS + G V +AR +FD M +DVVSW AM+ Y + GDLD A +LF M +N+
Sbjct: 247 NLMISGYATSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKIGDLDTAKELFDHMPVKNLV 306
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SWN++ITG+ R EAL FQ M +E +PD+ T+ SV+SACA LG++++ W+
Sbjct: 307 SWNAMITGYNHNSRYDEALRTFQLMM---LEGRFRPDEATLVSVVSACAQLGSVEYCNWI 363
Query: 296 HGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYG 355
++ +S V +G AL+DM+ KCG V RA +F +M + + WT MIS FA NG
Sbjct: 364 SSFIGKSNTHLTVALGNALIDMFAKCGDVGRAQSIFYKMETRCIITWTTMISGFAFNGLC 423
Query: 356 KEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYAC 415
+EA + M EGV + F+ L+AC H GL+++G F M Y ++P + HY C
Sbjct: 424 REALLVYNNMCREGVELDGTVFIAALAACTHGGLLQEGWSIFNEMVEQYNIQPRMEHYGC 483
Query: 416 MIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLN 475
++D+L RAG EA I SMP+EP V +W LL C HGN EL E V++ + +L+P N
Sbjct: 484 VVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLSSCVAHGNAELIEYVSKKITELEPFN 543
Query: 476 HAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVV 535
++ V + + A GR+D V R M+ GI K VPG S ++V VHEF K +
Sbjct: 544 SSYQVLVSNCSALEGRWDGVIGARTSMRNWGIEK-VPGSSLIQVGSEVHEFLAKDTRHER 602
Query: 536 KEELVLILNGLSKIMKNGGFGQYIRGLS 563
++E+ ++GL +M++ ++R S
Sbjct: 603 RKEIYETVDGLMALMRHTEQTPWVRQCS 630
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 175/342 (51%), Gaps = 28/342 (8%)
Query: 125 YKQMLCTGISPDCLTFPFLLKECTKRLDGLVG--ASVYGQVVKFGVCDDVFVQNSVISLF 182
Y M G+ P+ TF FLL+ C L GL V+GQ+V+ G DVFVQN+++ ++
Sbjct: 98 YVAMRAQGVPPNGFTFTFLLRACA--LLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVY 155
Query: 183 MAC-----GFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
C G V +AR +FDEM ++DVVSWN+++ Y+ SGD A+ LF M +RN+ SW
Sbjct: 156 YRCGGGGAGGVGAARQVFDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVSW 215
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
N+++ GF + G A +F M S + ++ ++S A G ++ + V
Sbjct: 216 NTVVAGFARTGDMVTARTVFDRMPSR--------NAVSWNLMISGYATSGDVEAARSVFD 267
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
+ + DVV TA+V Y K G ++ A +F MP K+ ++W AMI+ + N E
Sbjct: 268 RMDQK----DVVSWTAMVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMITGYNHNSRYDE 323
Query: 358 AFDTFREMEAEG-VRPNHVTFVGLLSACAHSGLVEKGRW--CFVMMRHVYLVEPHVYHYA 414
A TF+ M EG RP+ T V ++SACA G VE W F+ + +L V
Sbjct: 324 ALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNTHLT---VALGN 380
Query: 415 CMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHG 456
+ID+ ++ G A+ + M + W ++ G +G
Sbjct: 381 ALIDMFAKCGDVGRAQSIFYKMETRC-IITWTTMISGFAFNG 421
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 24/246 (9%)
Query: 269 VKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAY 328
V P+ T +L ACA LG VHG + R G DV + AL+D+Y +CG
Sbjct: 106 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYYRCGGGGAGG 165
Query: 329 G-----VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
VF EM KD ++W +++ V+ +G A F M V V++ +++
Sbjct: 166 VGAARQVFDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNV----VSWNTVVAG 221
Query: 384 CAHSGLVEKGRWCFVMM--RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPD 441
A +G + R F M R+ + YA D+ EA R + + D
Sbjct: 222 FARTGDMVTARTVFDRMPSRNAVSWNLMISGYATSGDV--------EAARSVFDRMDQKD 273
Query: 442 VFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKTRN 500
V W A++ G+++ A+ L D P+ + N + Y R+D+ +T
Sbjct: 274 VVSWTAMVSAYAKIGDLD----TAKELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQ 329
Query: 501 LMKERG 506
LM G
Sbjct: 330 LMMLEG 335
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 135/347 (38%), Gaps = 68/347 (19%)
Query: 61 DHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGK 120
D +++ A + G L A +F H+ +L ++N MI + +++ +
Sbjct: 270 DQKDVVSWTAMVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMI------TGYNHNSRYDE 323
Query: 121 CLKLYKQMLCTG-ISPDCLTFPFLLKECTK--------RLDGLVGASVYGQVVKFGVCDD 171
L+ ++ M+ G PD T ++ C + + +G S V G
Sbjct: 324 ALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNTHLTVALG---- 379
Query: 172 VFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKK 231
N++I +F CG V A+ +F +M R +++W M
Sbjct: 380 ----NALIDMFAKCGDVGRAQSIFYKMETRCIITWTTM---------------------- 413
Query: 232 RNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDH 291
I+GF G REAL ++ M E V+ D + L+AC + G +
Sbjct: 414 ---------ISGFAFNGLCREALLVYNNM----CREGVELDGTVFIAALAACTHGGLLQE 460
Query: 292 GKW--VHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMP-KKDTLAWTAMISV 348
G W + + + + + +VD+ G+ G ++ A + MP + + W ++S
Sbjct: 461 G-WSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLS- 518
Query: 349 FALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
+ +G + + + P + ++ L+S C+ +GRW
Sbjct: 519 -SCVAHGNAELIEYVSKKITELEPFNSSYQVLVSNCS----ALEGRW 560
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/393 (38%), Positives = 231/393 (58%), Gaps = 6/393 (1%)
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G +V+ +V+ G V ++N+++ +F CG V +A+ +FD M +DV SW +M+ Y
Sbjct: 251 LGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYA 310
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+ GDL+ A LF+ + RN+ SW+ ++ + EA+ +F +M ++ VE P
Sbjct: 311 KCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVE----PIDA 366
Query: 275 TIASVLSACAYLGAIDHGKWVHG-YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
T+ SVLSACA L ++D G W++ Y+ ++ + A +DM+ KCG V A +F
Sbjct: 367 TLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSN 426
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M K+ ++W MI L+G +EA F+E + G+ P+ T++G+LSAC+H GLV +G
Sbjct: 427 MEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEG 486
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R F M+ VY +EP HYACMID+L + GL EA + RSMP+ D WGALL C+
Sbjct: 487 RCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACR 546
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
MHGNVE+G+ A L LDP + YV + +YA ++ VK R +M++R ++K PG
Sbjct: 547 MHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKN-PG 605
Query: 514 CSSVEVDGVVHEFSMKGSPKVVKEELVLILNGL 546
CSS+EVDG HEF + V E++ L +
Sbjct: 606 CSSIEVDGKCHEFLVADVSHVHSEDIYAALGNI 638
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 183/428 (42%), Gaps = 80/428 (18%)
Query: 67 TRLLFFCALSVSGSLSYATNVFSH-IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
+RLL FCALS L++A V + + + Y M+R T+ L L+
Sbjct: 67 SRLLAFCALSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTH------ALTLF 120
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVISLFMA 184
+++L ++ D T F +K +++ K G + V N+++ ++ +
Sbjct: 121 RRVLRDRLAVDARTIVFAVKAAATSSSPT--EAIHCVAFKRGFIGQSVLAGNALVHMYTS 178
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
+ AR LFDEM++RDVVSW +I GY R G D A +F RM
Sbjct: 179 SMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRM--------------- 223
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
V E V P+++T+ + SA +G + G+ VH + SG
Sbjct: 224 -------------------VVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGG 264
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG----------- 353
V + ALVDM+GKCGCV A VF MP KD +WT+M+S +A G
Sbjct: 265 RMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKE 324
Query: 354 --------------------YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
EA F +M A GV P T V +LSACA ++ G
Sbjct: 325 IPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVG 384
Query: 394 RWCF--VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
W + ++ H + P++ + ID+ ++ G A RL +M + +V W ++
Sbjct: 385 TWLYDTYIVSHKVELTPNLSN--AFIDMFAKCGDVGAASRLFSNME-DKNVVSWNTMIMA 441
Query: 452 CQMHGNVE 459
+HG E
Sbjct: 442 HGLHGQPE 449
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 19/281 (6%)
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
N + +++ GF++ G+ AL LF+ + + + + + ++ + AI
Sbjct: 96 NAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVKAAATSSSPTEAIHCV 155
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+ G++ +S V+ G ALV MY + A +F EM +D ++WT +I +A
Sbjct: 156 AFKRGFIGQS-----VLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARG 210
Query: 353 GYGKEAFDTF-REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP--- 408
G EA+ F R + AE V PN VT V SA GL+ GR H +VE
Sbjct: 211 GLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGR-----TVHQCIVESGGR 265
Query: 409 -HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY 467
V ++D+ + G + A+ + MP++ DV+ W +++ G++ E A+
Sbjct: 266 MSVNLENALVDMFGKCGCVAAAKEVFDGMPIK-DVYSWTSMVSAYAKCGDL---ENAAKL 321
Query: 468 LIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
++ N + + Y+ A D+ + N M G+
Sbjct: 322 FKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVE 362
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 287/563 (50%), Gaps = 75/563 (13%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSH 90
L+ +D + LK+IH ++ SP T ++RLL C + + YA +
Sbjct: 4 LKTLLDLPLHFLHLKQIHCLLLTSPIFYTR-RDLFLSRLLRRCCTAAT-QFRYARRLLCQ 61
Query: 91 IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKR 150
++ + ++ +I + N S Y+ M G+ P TFP LLK K
Sbjct: 62 LQTLSIQLWDSLI-GHFSGGITLNRRLS---FLAYRHMRRNGVIPSRHTFPPLLKAVFKL 117
Query: 151 LDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMI 210
D + +VKFG+ D FV+NS+IS + + G A LFD ++DVV+W AMI
Sbjct: 118 RDS-NPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMI 176
Query: 211 IGYLRSGDLDVALDLFRRMKKRNIFSWNSIITG--------------------FVQGGRA 250
G++R+G A+ F MKK + + + +++ GR
Sbjct: 177 DGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRV 236
Query: 251 R--------------------EALELFQEMQSSSV-----------------------EE 267
+ +A ++F EM S +V EE
Sbjct: 237 KCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEE 296
Query: 268 MVK----PDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGC 323
M+K P++ T++SVLSACA++GA+ G+ VH Y+ ++ ++ + GT L+D+Y KCGC
Sbjct: 297 MLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
+E A VF+ + +K+ WTAMI+ FA +GY ++AFD F M + V PN VTF+ +LSA
Sbjct: 357 LEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSA 416
Query: 384 CAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVF 443
CAH GLVE+GR F+ M+ + +E HYACM+D+ R GL EA+ LI MPMEP
Sbjct: 417 CAHGGLVEEGRRLFLSMKGRFNMELKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNV 476
Query: 444 VWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMK 503
VWGAL G C +H + ELG+ A +I L P + Y L ++Y+++ +D+V + R MK
Sbjct: 477 VWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMK 536
Query: 504 ERGIRKEVPGCSSVEVDGVVHEF 526
++ + K PG S +EV G + EF
Sbjct: 537 DQQVVKS-PGFSWIEVKGKLCEF 558
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 258/448 (57%), Gaps = 21/448 (4%)
Query: 71 FFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC 130
F+C L G + A +F + ++ ++N M+ A KS + L + +++
Sbjct: 152 FYCKL---GDMEIARKMFDEMAERNVVSWNSML-AGYLKSGD---------LVVAQRVFD 198
Query: 131 TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
D +++ ++ + D +S++ Q+ + N++IS + G + S
Sbjct: 199 EIPQKDVISWNSMISGYARAGDMEKASSLFQQMPERNFAS----WNAMISGHVEFGDIDS 254
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
AR FD M ++ VSW MI GY + GD+D A +LF ++ +++ +N++I + Q R
Sbjct: 255 ARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRP 314
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
EAL LF M + V V+PD++T+ASV+SAC+ LG + G W+ Y+RR G++ D +
Sbjct: 315 NEALNLFNNMLNPYVN--VQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHL 372
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
TAL+D+Y KCG +++AY +F + KKD +A+TAMI +NG +A F EM +
Sbjct: 373 ATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQI 432
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
PN +TF+GLL+A H+GLVE+G CF M+ LV P V HY M+D+ RAG EA
Sbjct: 433 FPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLV-PSVDHYGIMVDLFGRAGRLQEAL 491
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
LI+SMPM+P VWGALL C++H NVE GE AQ+ +L+P + L ++YA
Sbjct: 492 ELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGE 551
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVE 518
R+DDVK+ R + KE+G K +PGCS +E
Sbjct: 552 RWDDVKRLRKVTKEKGFSK-IPGCSWME 578
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 230/480 (47%), Gaps = 32/480 (6%)
Query: 40 NMRELKEIHTQIIKSPCLQTNDH-HSLITRLLFFCALSVSGSLS-YATNVFSHIKRSDLY 97
++++ K++H I+ + H ++ R + A + S +++ Y +V H K D +
Sbjct: 16 SVKQAKQVHALIL----IHGLSHLEPILARQILISASNYSATVAQYVHSVLHHSKSPDSF 71
Query: 98 TYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGA 157
++ IR + T + LY QM G+ P LK C + + G
Sbjct: 72 SWACAIRFS------TQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGI 125
Query: 158 SVYGQVVKFGVC---DDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
S++GQV KFG D ++V+ +++ + G + AR +FDEM+ R+VVSWN+M+ GYL
Sbjct: 126 SIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 185
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+SGDL VA +F + ++++ SWNS+I+G+ + G +A LFQ+M +
Sbjct: 186 KSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKASSLFQQMPERNFA-------- 237
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
+ +++S G ID + + + + V ++ Y KCG V+ A +F ++
Sbjct: 238 SWNAMISGHVEFGDIDSARSFFDAMPQK----NNVSWMTMISGYSKCGDVDSACELFDQV 293
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREM--EAEGVRPNHVTFVGLLSACAHSGLVEK 392
KD L + AMI+ +A N EA + F M V+P+ +T ++SAC+ G +
Sbjct: 294 GGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRF 353
Query: 393 GRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGC 452
G W MR + +E + ++D+ ++ G +A L + + D+ + A++ GC
Sbjct: 354 GPWIESYMRRLG-IEMDGHLATALLDLYAKCGSIDKAYELFHGL-RKKDLVAYTAMILGC 411
Query: 453 QMHGNVELGEKVAQYLIDLDPL-NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEV 511
++G K+ ++D N ++ L Y AG ++ + MK+ + V
Sbjct: 412 GINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSV 471
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 276/533 (51%), Gaps = 52/533 (9%)
Query: 27 TKLILRNAIDECKNMREL---KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSY 83
+++ N + C ++ L K+IH I++S + +T++ C G+
Sbjct: 229 SRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKC-----GAFKD 283
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A VF + D+ +N MIR S + + H + +ML G++PD T+ +
Sbjct: 284 AREVFECLSYRDVIAWNTMIRGFV-DSGQLEEAHG-----TFHRMLEEGVAPDRATYTTV 337
Query: 144 LKECTKRLDGLV-GASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
L C R GL G ++ + K G+ DV N++I++
Sbjct: 338 LSACA-RPGGLARGKEIHARAAKDGLVSDVRFGNALINM--------------------- 375
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
Y ++G + A +F RM KR++ SW +++ + + E+ F++M
Sbjct: 376 ----------YSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQM-- 423
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCG 322
+++ VK +KIT VL AC+ A+ GK +H + ++GL D+ + AL+ MY KCG
Sbjct: 424 --LQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCG 481
Query: 323 CVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLS 382
VE A VF+ M +D + W +I NG G EA + M++EG+RPN TFV +LS
Sbjct: 482 SVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLS 541
Query: 383 ACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDV 442
AC LVE+GR F M Y + P HYACM+DIL+RAG EAE +I ++P++P
Sbjct: 542 ACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSA 601
Query: 443 FVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLM 502
+WGALL C++H NVE+GE+ A++ + L+P N YV+L +YA AG + DV K R M
Sbjct: 602 AMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFM 661
Query: 503 KERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
KERG++KE PG S +E+ G VH F + +E+ L L K MK+ G+
Sbjct: 662 KERGVKKE-PGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGY 713
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 193/417 (46%), Gaps = 54/417 (12%)
Query: 37 ECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDL 96
+ K++ K++H I++ + + +L C GS++ A +F +
Sbjct: 40 KAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHC-----GSVNEARQLFDKFSNKSV 94
Query: 97 YTYNIMIRANACKSSETNDTHSG---KCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
++N+MI A H G + L+ M + PD TF +L C+
Sbjct: 95 VSWNVMISGYA---------HRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVL 145
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
G ++ +V++ G+ +D V N++IS++ CG V AR +FD M++RD VSW + Y
Sbjct: 146 NWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY 205
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
S G E+L+ + M ++E V+P +
Sbjct: 206 AES-------------------------------GYGEESLKTYHAM----LQERVRPSR 230
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
IT +VLSAC L A++ GK +H ++ S DV + TAL MY KCG + A VF+
Sbjct: 231 ITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFEC 290
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
+ +D +AW MI F +G +EA TF M EGV P+ T+ +LSACA G + +G
Sbjct: 291 LSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARG 350
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
+ LV + A +I++ S+AG +A ++ MP + DV W LLG
Sbjct: 351 KEIHARAAKDGLVSDVRFGNA-LINMYSKAGSMKDARQVFDRMP-KRDVVSWTTLLG 405
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 184/416 (44%), Gaps = 81/416 (19%)
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
G D + LL+ C K D VG V+ +++ GV +V++ N+++ L+ CG V A
Sbjct: 23 GPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEA 82
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R LF + +++ SWN +I+G+ G A+
Sbjct: 83 R-------------------------------QLFDKFSNKSVVSWNVMISGYAHRGLAQ 111
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
EA LF MQ +E ++PDK T S+LSAC+ ++ G+ +H + +GL D +G
Sbjct: 112 EAFNLFTLMQ----QERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVG 167
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
AL+ MY KCG V A VF M +D ++WT + +A +GYG+E+ T+ M E VR
Sbjct: 168 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVR 227
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYH------------------- 412
P+ +T++ +LSAC +EKG+ H ++VE YH
Sbjct: 228 PSRITYMNVLSACGSLAALEKGKQI-----HAHIVESE-YHSDVRVSTALTKMYMKCGAF 281
Query: 413 -----------------YACMIDILSRAGLFSEAERLIRSMPME---PDVFVWGALLGGC 452
+ MI +G EA M E PD + +L C
Sbjct: 282 KDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSAC 341
Query: 453 QMHGNVELGEKV-AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
G + G+++ A+ D + F L +MY+KAG D ++ + M +R +
Sbjct: 342 ARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDV 397
>gi|357142551|ref|XP_003572610.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 454
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 152/368 (41%), Positives = 216/368 (58%), Gaps = 9/368 (2%)
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
L + Q +K G V NS++ L+ G + AR +FD + DV SWN M+ GY
Sbjct: 93 LAAPVAHAQALKCGALAHSVVTNSLLKLYCTLGLLPHARRVFDSGAALDVASWNTMVSGY 152
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
+SGDL A ++F RM RN+ SW+++I V EAL +F +M + E KPD
Sbjct: 153 GKSGDLAAAREVFGRMPGRNLVSWSAMIDALVHAEEFGEALSVFDQM----MREGFKPDV 208
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGL---DCDVVIGTALVDMYGKCGCVERAYGV 330
+ + S+L ACA+LGA+ G+W H YL G +V++ TALVDMY KCGC+E A+ V
Sbjct: 209 VVLVSMLKACAHLGAVKRGRWAHQYLETEGFAGRQRNVMVETALVDMYCKCGCMEEAWCV 268
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F + +D + W +MI A+NG+G A + F+ M EG PN TF G L AC H+G V
Sbjct: 269 FDGVRYRDVVLWNSMIGGLAMNGHGDRALELFQRMLQEGFVPNQSTFAGALCACTHTGHV 328
Query: 391 EKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLG 450
++GR F M H + +EP HY C+ D+L RAG EAE ++ MPMEP WGAL+
Sbjct: 329 DEGREIFKSMWH-HGIEPQREHYGCLADLLGRAGRVGEAEAVLLDMPMEPHASQWGALML 387
Query: 451 GCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKE 510
CQMH ++ +GE+V + LI+L+P + Y L ++YA G +DD + R +M E+G +K+
Sbjct: 388 SCQMHNDITVGERVGKRLIELEPHHGGRYAILFNLYAVNGLWDDARAIRQMMVEKGAKKD 447
Query: 511 VPGCSSVE 518
G S VE
Sbjct: 448 A-GLSLVE 454
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 45/273 (16%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SG L+ A VF + +L +++ MI A + G+ L ++ QM+ G PD
Sbjct: 155 SGDLAAAREVFGRMPGRNLVSWSAMIDA------LVHAEEFGEALSVFDQMMREGFKPDV 208
Query: 138 LTFPFLLKECTKRLDGLVG--ASVYGQVVKF-GVCDDVFVQNSVISLFMACGFVTSARML 194
+ +LK C G A Y + F G +V V+ +++ ++ CG + A +
Sbjct: 209 VVLVSMLKACAHLGAVKRGRWAHQYLETEGFAGRQRNVMVETALVDMYCKCGCMEEAWCV 268
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD + RDVV WN+MI G +G D AL+LF+RM + GFV
Sbjct: 269 FDGVRYRDVVLWNSMIGGLAMNGHGDRALELFQRMLQE----------GFV--------- 309
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
P++ T A L AC + G +D G+ + + G++ L
Sbjct: 310 ----------------PNQSTFAGALCACTHTGHVDEGREIFKSMWHHGIEPQREHYGCL 353
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLA-WTAMI 346
D+ G+ G V A V +MP + + W A++
Sbjct: 354 ADLLGRAGRVGEAEAVLLDMPMEPHASQWGALM 386
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/463 (35%), Positives = 253/463 (54%), Gaps = 18/463 (3%)
Query: 84 ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFL 143
A VF + ++ ++N +I + + + L L+ +M+ G PD +T +
Sbjct: 201 AQKVFDAMPERNIVSWNSLI------TCYEQNGPVDEALALFVRMMKDGFVPDEVTLASV 254
Query: 144 LKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRD 202
+ C G G V+ ++VK +D+ + N+++ ++ CG A+ +FD M+ R
Sbjct: 255 MSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRS 314
Query: 203 VVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQS 262
VVS +MI GY +S ++ A +F +M ++N+ +WN +I + EAL LF ++
Sbjct: 315 VVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLK- 373
Query: 263 SSVEEMVKPDKITIASVLSACAYLGAIDHGKWVH------GYLRRSGLDCDVVIGTALVD 316
E V P T +VL+ACA L + G+ H G+ SG + DV +G +LVD
Sbjct: 374 ---RESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVD 430
Query: 317 MYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVT 376
MY K G + VF+ M +D ++W AMI +A NG K+A F M RP+ VT
Sbjct: 431 MYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVT 490
Query: 377 FVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
+G+LSAC HSGLV++GR F M + + P HY CMID+L RAG E E LI +M
Sbjct: 491 MIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENM 550
Query: 437 PMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVK 496
PMEPD +W +LLG C++H N+++GE A L +LDP N YV L +MYA+ G++ DV
Sbjct: 551 PMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVF 610
Query: 497 KTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEEL 539
+ R MK RG+ K+ PGCS +E+ V+ F + + + E+
Sbjct: 611 RVRRSMKHRGVSKQ-PGCSWIEIGRKVNVFLARDNIHPCRNEI 652
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 137/261 (52%), Gaps = 6/261 (2%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
+ F+ N+++S + G + AR +FD M +R+ S+NA++ R G D AL LF +
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+ S+N+++ Q GR +AL M + ++ V + + AS LSACA A
Sbjct: 109 DPDQCSYNAVVAALAQHGRGGDALRFLAAMHA---DDFVL-NAYSFASALSACASEKASR 164
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G+ VH + +S DV IGTALVDMY KC E A VF MP+++ ++W ++I+ +
Sbjct: 165 TGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYE 224
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRHVYLVEPH 409
NG EA F M +G P+ VT ++SACA +GR M++ E
Sbjct: 225 QNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDM 284
Query: 410 VYHYACMIDILSRAGLFSEAE 430
V + A ++D+ ++ G EA+
Sbjct: 285 VLNNA-LVDMYAKCGRTWEAK 304
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 182/443 (41%), Gaps = 98/443 (22%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRA-------------------------NACKSSET 113
GSL A VF + + ++YN ++ A NA ++
Sbjct: 64 GSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALA 123
Query: 114 NDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVF 173
G L+ M + +F L C G V+ V K DV+
Sbjct: 124 QHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVY 183
Query: 174 VQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRN 233
+ +++ ++ C A+ +FD M R++VSWN++I Y ++G +D AL LF RM K
Sbjct: 184 IGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMK-- 241
Query: 234 IFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK 293
GFV PD++T+ASV+SACA L A G+
Sbjct: 242 --------DGFV-------------------------PDEVTLASVMSACAGLAAGREGR 268
Query: 294 WVHGYLRRSG-LDCDVVIGTALVDMYGKCG------CV-ER------------------- 326
VH + +S D+V+ ALVDMY KCG CV +R
Sbjct: 269 QVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKS 328
Query: 327 -----AYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
A VF +M +K+ +AW +I+ +A N +EA F ++ E V P H T+ +L
Sbjct: 329 ANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVL 388
Query: 382 SACAHSGLVEKGRWCFVMM-----RHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
+ACA+ ++ G+ V + R E V+ ++D+ + G S+ ++ M
Sbjct: 389 NACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERM 448
Query: 437 PMEPDVFVWGALLGGCQMHGNVE 459
+V W A++ G +G +
Sbjct: 449 AARDNV-SWNAMIVGYAQNGRAK 470
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 151/386 (39%), Positives = 239/386 (61%), Gaps = 11/386 (2%)
Query: 172 VFVQNSVISLFMACGFVTSARMLFDEM--SNRDVVSWNAMIIGYLRSGDLDVALDLFRRM 229
V N+++S + G A LFDEM + R+ V+WNAMI Y+R GDLD A LF M
Sbjct: 136 VVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSARKLFNTM 195
Query: 230 KKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAI 289
RN+ +WNS+I G+ Q G++ A+ELF+EM ++ + + PD++T+ SV+SAC +LGA+
Sbjct: 196 PGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITA---KKLTPDEVTMVSVISACGHLGAL 252
Query: 290 DHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVF 349
+ G WV +L + + + A++ MY +CG +E A VF+EM +D +++ +IS F
Sbjct: 253 ELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGF 312
Query: 350 ALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPH 409
A +G+G EA + M+ G+ P+ VTF+G+L+AC+H+GL+E+GR F ++ +P
Sbjct: 313 AAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPA 367
Query: 410 VYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLI 469
+ HYACM+D+L R G +A+R + MPMEP V+G+LL ++H VELGE A L
Sbjct: 368 IDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLF 427
Query: 470 DLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMK 529
+L+P N ++ L ++YA AGR+ DV++ R MK+ G++K G S VE G +H+F +
Sbjct: 428 ELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKK-TTGWSWVEYGGKLHKFIVA 486
Query: 530 GSPKVVKEELVLILNGLSKIMKNGGF 555
+++ +L L K M+ G+
Sbjct: 487 DRSHERSDDIYQLLIELRKKMREAGY 512
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 190/435 (43%), Gaps = 103/435 (23%)
Query: 119 GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSV 178
K + +Y+QM G+ PD +P L+K G G + V+K G D FV+N+V
Sbjct: 12 AKVVLMYEQMQGCGVRPDAFVYPILIKSA-----GTGGIGFHAHVLKLGHGSDAFVRNAV 66
Query: 179 ISLF---------MACGFVT-----SARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
I ++ M G+ A+ LFD M R+V++W AM+ GY + DL+ A
Sbjct: 67 IDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARR 126
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
F M +R++ SWN++++G+ Q G A EAL LF EM
Sbjct: 127 YFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM------------------------ 162
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
LGA R S V A++ Y + G ++ A +F MP ++ + W +
Sbjct: 163 -LGA----------YRNS------VTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNS 205
Query: 345 MISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRWC--FVMMR 401
MI+ +A NG A + F+EM A+ + P+ VT V ++SAC H G +E G W F+
Sbjct: 206 MIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN 265
Query: 402 HVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP------------------------ 437
+ L + + MI + SR G +A+R+ + M
Sbjct: 266 QIKL---SISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAI 322
Query: 438 ----------MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYA 487
+EPD + +L C G +E G KV + + D ++H Y + D+
Sbjct: 323 NLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-PAIDH--YACMVDLLG 379
Query: 488 KAGRFDDVKKTRNLM 502
+ G +D K+T M
Sbjct: 380 RVGELEDAKRTMERM 394
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 234/403 (58%), Gaps = 6/403 (1%)
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G +V+ +V+ G V ++N+++ +F CG V +A+ +FD M +DV SW +M+ Y
Sbjct: 251 LGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYA 310
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
+ GDL+ A LF+ + RN+ SW+ ++ + EA+ +F +M ++ VE P
Sbjct: 311 KCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVE----PIDA 366
Query: 275 TIASVLSACAYLGAIDHGKWVHG-YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
T+ SVLSACA L ++D G W++ Y+ ++ + A +DM+ KCG V A +F
Sbjct: 367 TLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSN 426
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
M K+ ++W MI L+G +EA F+E + G+ P+ T++G+LSAC+H GLV +G
Sbjct: 427 MEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEG 486
Query: 394 RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQ 453
R F M+ VY +EP HYACMID+L + GL EA + RSMP+ D WGALL C+
Sbjct: 487 RCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACR 546
Query: 454 MHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPG 513
MHGNVE+G+ A L LDP + YV + +YA ++ VK R +M++R ++K PG
Sbjct: 547 MHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKN-PG 605
Query: 514 CSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFG 556
CSS+EVDG HEF + V E++ L + K G G
Sbjct: 606 CSSIEVDGKCHEFLVADVSHVHSEDIYAALGNIYLHSKAEGSG 648
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 183/428 (42%), Gaps = 80/428 (18%)
Query: 67 TRLLFFCALSVSGSLSYATNVFSH-IKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLY 125
+RLL FCALS L++A V + + + Y M+R T+ L L+
Sbjct: 67 SRLLAFCALSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTH------ALTLF 120
Query: 126 KQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFG-VCDDVFVQNSVISLFMA 184
+++L ++ D T F +K +++ K G + V N+++ ++ +
Sbjct: 121 RRVLRDRLAVDARTIVFAVKAAATSSSPT--EAIHCVAFKRGFIGQSVLAGNALVHMYTS 178
Query: 185 CGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGF 244
+ AR LFDEM++RDVVSW +I GY R G D A +F RM
Sbjct: 179 SMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRM--------------- 223
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
V E V P+++T+ + SA +G + G+ VH + SG
Sbjct: 224 -------------------VVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGG 264
Query: 305 DCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNG----------- 353
V + ALVDM+GKCGCV A VF MP KD +WT+M+S +A G
Sbjct: 265 RMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKE 324
Query: 354 --------------------YGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
EA F +M A GV P T V +LSACA ++ G
Sbjct: 325 IPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVG 384
Query: 394 RWCF--VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGG 451
W + ++ H + P++ + ID+ ++ G A RL +M + +V W ++
Sbjct: 385 TWLYDTYIVSHKVELTPNLSN--AFIDMFAKCGDVGAASRLFSNME-DKNVVSWNTMIMA 441
Query: 452 CQMHGNVE 459
+HG E
Sbjct: 442 HGLHGQPE 449
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 19/281 (6%)
Query: 233 NIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
N + +++ GF++ G+ AL LF+ + + + + + ++ + AI
Sbjct: 96 NAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVKAAATSSSPTEAIHCV 155
Query: 293 KWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALN 352
+ G++ +S V+ G ALV MY + A +F EM +D ++WT +I +A
Sbjct: 156 AFKRGFIGQS-----VLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARG 210
Query: 353 GYGKEAFDTF-REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEP--- 408
G EA+ F R + AE V PN VT V SA GL+ GR H +VE
Sbjct: 211 GLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGR-----TVHQCIVESGGR 265
Query: 409 -HVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQY 467
V ++D+ + G + A+ + MP++ DV+ W +++ G++ E A+
Sbjct: 266 MSVNLENALVDMFGKCGCVAAAKEVFDGMPIK-DVYSWTSMVSAYAKCGDL---ENAAKL 321
Query: 468 LIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIR 508
++ N + + Y+ A D+ + N M G+
Sbjct: 322 FKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVE 362
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 272/500 (54%), Gaps = 51/500 (10%)
Query: 31 LRNAIDECKNMREL---KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNV 87
L I C + +L KEIH ++++S S + + C G L A V
Sbjct: 402 LTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKC-----GCLEMAKEV 456
Query: 88 FSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKEC 147
F I+R ++ ++N MI + K S C++L+++M GI P T +L C
Sbjct: 457 FEQIQRKNVVSWNSMIAGYSLKGD------SKSCIELFRRMDEEGIRPTLTTLSSILMAC 510
Query: 148 TKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWN 207
++ ++ +G ++G +++ V D+FV +S+I L+ CG + SA
Sbjct: 511 SRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE--------------- 555
Query: 208 AMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
++F+ M K N+ SWN +I+G+V+ G EAL +F +M+ + V
Sbjct: 556 ----------------NVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGV-- 597
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
KPD IT SVL AC+ L ++ GK +H ++ S L+ + V+ AL+DMY KCG V+ A
Sbjct: 598 --KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEA 655
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
+F ++P++D ++WT+MI+ + +G EA F +M+ +P+ VTF+ +LSAC+H+
Sbjct: 656 LHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHA 715
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP-MEPDVFVWG 446
GLV++G + F M Y +P V HY+C+ID+L R G EA +++ P + DV +
Sbjct: 716 GLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLS 775
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
L C +H ++LGE++ + LI+ DP + + Y+ L +MYA ++D+V+K R +KE G
Sbjct: 776 TLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELG 835
Query: 507 IRKEVPGCSSVEVDGVVHEF 526
++K PGCS +EV +H F
Sbjct: 836 LKKN-PGCSWIEVGKRIHPF 854
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 200/412 (48%), Gaps = 79/412 (19%)
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
+ PD T+P +LK C+ G V+ V+K G DV V +S + ++ C
Sbjct: 294 LKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCN------ 347
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
+F++ A+ LF M +R++ SWN++I+ + Q G+ +
Sbjct: 348 -VFED------------------------AIKLFDEMPERDVASWNNVISCYYQDGQPEK 382
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
ALELF+EM+ S KPD +T+ +V+S+CA L ++ GK +H L RSG D + +
Sbjct: 383 ALELFEEMKVSGF----KPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSS 438
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
ALVDMYGKCGC+E A VF+++ +K+ ++W +MI+ ++L G K + FR M+ EG+RP
Sbjct: 439 ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 498
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSE 428
T +L AC+ S ++ G++ H Y+ VE ++ + +ID+ + G
Sbjct: 499 TLTTLSSILMACSRSVNLQLGKFI-----HGYIIRNRVEADIFVNSSLIDLYFKCGNIGS 553
Query: 429 AERLIRSMP----------------------------------MEPDVFVWGALLGGCQM 454
AE + ++MP ++PD + ++L C
Sbjct: 554 AENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQ 613
Query: 455 HGNVELGEKVAQYLIDLD-PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
+E G+++ ++I+ +N L DMYAK G D+ N + ER
Sbjct: 614 LAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPER 665
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 156/427 (36%), Positives = 239/427 (55%), Gaps = 36/427 (8%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L ++ ML G P+ TF +L C+ D G V+ ++K + D+ FV ++I +
Sbjct: 501 LTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDM 560
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ C ++ D DVA F R+ R++F+W II
Sbjct: 561 YAKCMYLE----------------------------DADVA---FNRLSVRDLFTWTVII 589
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
T + Q + +AL F++MQ +E VKP++ T+A LS C+ L +++ G+ +H + +
Sbjct: 590 TNYAQTNQGEKALNYFRQMQ----QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK 645
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
SG D+ +G+ALVDMY KCGC+E A +F+ + ++DT+AW +I +A NG G +A
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTA 705
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR M EG+ P+ VTF G+LSAC+H GLVE+G+ F M + + P V H ACM+DIL
Sbjct: 706 FRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILG 765
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
R G F E E I+ M + + +W +LG +MH N+ LGEK A L +L P + Y+
Sbjct: 766 RVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYIL 825
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
L +++A GR+DDVK+ R+LM +G++KE PGCS VE +G VH F +E+ L
Sbjct: 826 LSNIFATEGRWDDVKRVRSLMSSKGVKKE-PGCSWVEANGQVHTFVSHDYSHPQIQEIHL 884
Query: 542 ILNGLSK 548
L+ L +
Sbjct: 885 KLDELDR 891
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 217/509 (42%), Gaps = 85/509 (16%)
Query: 37 ECKNMREL---KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR 93
EC + R L K IH I+K + D H ++ + + S +YA V + +
Sbjct: 121 ECASKRSLGVAKAIHGLIVKD--VINPDSHLWVSLVNVYAKCRYS---AYARLVLAKMPD 175
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
D+ ++ +I+ + ND+ + L+++M GI P+ T LK C+ +
Sbjct: 176 RDVVSWTALIQGLVAEGF-ANDS-----IYLFQEMQNEGIMPNEFTLATGLKACSLCMAL 229
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
+G ++ Q K G+ D+FV ++++ L+ CG
Sbjct: 230 DLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCG--------------------------- 262
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
++++A +F M ++N +WN ++ G+ Q G L+LF M +E VK ++
Sbjct: 263 ----EIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSM----MELDVKCNE 314
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
T+ +VL CA + G+ +H + + G + + IG LVDMY KCG A GVFK
Sbjct: 315 FTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKT 374
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
+ K D + W+A+I+ G +E+ F M PN T LLSA ++G ++ G
Sbjct: 375 IKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYG 434
Query: 394 R------WCFVMMRHV---------YLVEPHVYH----YACMIDI-----------LSRA 423
+ W + V Y+ V+ Y M+D L
Sbjct: 435 QSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDC 494
Query: 424 GLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYLI--DLDPLNHAF 478
G++ + M E P+++ + ++LG C +V G +V ++I LD N+
Sbjct: 495 GMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDD-NNFV 553
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
L DMYAK +D N + R +
Sbjct: 554 CTALIDMYAKCMYLEDADVAFNRLSVRDL 582
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 172/354 (48%), Gaps = 47/354 (13%)
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
+ +L+EC + V +++G +VK + D + S+++++ C + AR++ +M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+RDVVSW A+I G V G A +++ LFQE
Sbjct: 175 DRDVVSWTALIQG-------------------------------LVAEGFANDSIYLFQE 203
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
MQ+ E + P++ T+A+ L AC+ A+D GK +H + GL D+ +G+ALVD+Y
Sbjct: 204 MQN----EGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYA 259
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG +E A +F MP+++ + W +++ +A G F M V+ N T
Sbjct: 260 KCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTT 319
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAGLFSEAERLIRS 435
+L CA+S +++G+ + H ++ E + + ++D+ S+ GL +A + ++
Sbjct: 320 VLKGCANSKNLKQGQ-----VIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKT 374
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
+ +PD+ VW AL+ G E K+ + D L + + +C + + A
Sbjct: 375 IK-KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQY--TICSLLSAA 425
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 169/394 (42%), Gaps = 54/394 (13%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A+ +F + + T+N+++ A + T LKL+ M+ + +
Sbjct: 262 GEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTG------VLKLFCSMMELDVKCNEF 315
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +LK C + G ++ ++K G + F+ ++ ++ CG A
Sbjct: 316 TLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDA------- 368
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+ +F+ +KK +I W+++IT Q G++ E+++LF
Sbjct: 369 ------------------------IGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH 404
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M+ P++ TI S+LSA G + +G+ +H + + G + DV + ALV MY
Sbjct: 405 LMRLGDT----LPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMY 460
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
K GCV +++ M +D ++W A +S G F M EG PN TF+
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV--YHYAC--MIDILSRAGLFSEAERLIR 434
+L +C+ V GR H ++++ + ++ C +ID+ ++ +A+
Sbjct: 521 SILGSCSCLFDVHYGR-----QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFN 575
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ + D+F W ++ + GEK Y
Sbjct: 576 RLSVR-DLFTWTVIITN---YAQTNQGEKALNYF 605
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 178/530 (33%), Positives = 280/530 (52%), Gaps = 49/530 (9%)
Query: 31 LRNAIDECKNMRELKEIHTQIIKSPCLQTNDHH-SLITRLLFFCALSVSGSLSYATNVFS 89
L A+ E ++ KEIH I+++ C + S + + F C + A NVF
Sbjct: 355 LLPALTELNGFKQGKEIHGYIVRN-CAHVDVFLVSALVDIYFKCR-----DVRMAQNVFD 408
Query: 90 HIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTK 149
K D+ + MI S + S +K+++ +L GI P+ + L C
Sbjct: 409 ATKSIDVVIGSTMI------SGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACAS 462
Query: 150 RLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAM 209
+G ++G V+K +V+++++ ++ CG
Sbjct: 463 MAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCG----------------------- 499
Query: 210 IIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMV 269
LD++ +F +M ++ +WNS+I+ F Q G EAL+LF++M + E V
Sbjct: 500 --------RLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQM----IMEGV 547
Query: 270 KPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYG 329
K + +TI+S+LSACA L AI +GK +HG + + + D+ +AL+DMYGKCG +E A
Sbjct: 548 KYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALR 607
Query: 330 VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGL 389
VF+ MP+K+ ++W ++IS + +G KE+ D M+ EG + +HVTF+ L+SACAH+G
Sbjct: 608 VFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQ 667
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALL 449
V++G F M Y +EP V H +CM+D+ SRAG +A + I MP +PD +WGALL
Sbjct: 668 VQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALL 727
Query: 450 GGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRK 509
C++H NVEL E +Q L LDP N +YV + ++ A AGR+D V K R LMK++ ++K
Sbjct: 728 HACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQK 787
Query: 510 EVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGFGQYI 559
+PG S V+V+ H F EE+ + L L +K G G I
Sbjct: 788 -IPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQEGNGNLI 836
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 188/381 (49%), Gaps = 47/381 (12%)
Query: 81 LSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTF 140
L A +F + R DL T+N MI + C + D L+L+ M +G+ PD +T
Sbjct: 299 LEEAWRLFGLMPRDDLVTWNGMI--SGCVQNGLVD----DALRLFCDMQKSGLQPDSVTL 352
Query: 141 PFLLKECTKRLDGL-VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
LL T+ L+G G ++G +V+ DVF+ ++++ ++ C V A+ +FD
Sbjct: 353 ASLLPALTE-LNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATK 411
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+ DVV + MI GY+ + + A+ +FR + I
Sbjct: 412 SIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGI------------------------- 446
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
KP+ + +AS L ACA + A+ G+ +HGY+ ++ + + +AL+DMY
Sbjct: 447 ----------KPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYS 496
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG ++ ++ +F +M KD + W +MIS FA NG +EA D FR+M EGV+ N+VT
Sbjct: 497 KCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISS 556
Query: 380 LLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPM 438
+LSACA + G+ ++++ + ++ + +ID+ + G A R+ MP
Sbjct: 557 ILSACAGLPAIYYGKEIHGIIIKGP--IRADLFAESALIDMYGKCGNLELALRVFEHMP- 613
Query: 439 EPDVFVWGALLGGCQMHGNVE 459
E + W +++ HG V+
Sbjct: 614 EKNEVSWNSIISAYGAHGLVK 634
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 172/383 (44%), Gaps = 45/383 (11%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
+G L A VF + D +N+M+ + D S + L++ M +G P+
Sbjct: 195 AGLLDGAREVFDGMDERDCVLWNVMMDGYV----KAGDVASA--VGLFRVMRASGCDPNF 248
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
T L C D L G ++ VK+G+ +V V N+++S++ C + A LF
Sbjct: 249 ATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGL 308
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M D+V+WN MI G +++G +D +AL LF
Sbjct: 309 MPRDDLVTWNGMISGCVQNGLVD-------------------------------DALRLF 337
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+MQ S ++ PD +T+AS+L A L GK +HGY+ R+ DV + +ALVD+
Sbjct: 338 CDMQKSGLQ----PDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDI 393
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KC V A VF D + + MIS + LN + A FR + A G++PN V
Sbjct: 394 YFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMV 453
Query: 378 VGLLSACAHSGLVEKGRWCF-VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSM 436
L ACA + G+ ++++ Y E Y + ++D+ S+ G + + M
Sbjct: 454 ASTLPACASMAAMRIGQELHGYVLKNAY--EGRCYVESALMDMYSKCGRLDLSHYMFSKM 511
Query: 437 PMEPDVFVWGALLGGCQMHGNVE 459
+ +V W +++ +G E
Sbjct: 512 SAKDEV-TWNSMISSFAQNGEPE 533
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 172/399 (43%), Gaps = 81/399 (20%)
Query: 135 PDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARML 194
PD T P+++K C +G V+ G+ D++V +++I ++ G + AR +
Sbjct: 145 PDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREV 204
Query: 195 FDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREAL 254
FD M RD V WN M+ GY+++GD+ A+ LFR M+
Sbjct: 205 FDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASG--------------------- 243
Query: 255 ELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTAL 314
P+ T+A LS CA + G +H + GL+ +V + L
Sbjct: 244 --------------CDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTL 289
Query: 315 VDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNH 374
V MY KC C+E A+ +F MP+ D + W MIS NG +A F +M+ G++P+
Sbjct: 290 VSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDS 349
Query: 375 VTFVGLLSA--------------------CAH------SGLVEKGRWCFVMMRHVYLVEP 408
VT LL A CAH S LV+ + R V + +
Sbjct: 350 VTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVD----IYFKCRDVRMAQ- 404
Query: 409 HVYHYACMIDILSRAGLF--------SEAE----RLIRSMPMEPDVFVWGALLGGCQMHG 456
+V+ ID++ + + SEA R + ++ ++P+ + + L C
Sbjct: 405 NVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMA 464
Query: 457 NVELGEKVAQYLIDLDPLNHAFYVN--LCDMYAKAGRFD 493
+ +G+++ Y++ + YV L DMY+K GR D
Sbjct: 465 AMRIGQELHGYVLK-NAYEGRCYVESALMDMYSKCGRLD 502
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 107/232 (46%), Gaps = 4/232 (1%)
Query: 228 RMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLG 287
R WN +I GF G R A+ + +M + +PD T+ V+ +CA LG
Sbjct: 104 RAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSP--RPDGHTLPYVVKSCAALG 161
Query: 288 AIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMIS 347
A+ G+ VH R GLD D+ +G+AL+ MY G ++ A VF M ++D + W M+
Sbjct: 162 ALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMD 221
Query: 348 VFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVE 407
+ G A FR M A G PN T LS CA + G + Y +E
Sbjct: 222 GYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVK-YGLE 280
Query: 408 PHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVE 459
P V ++ + ++ EA RL MP + D+ W ++ GC +G V+
Sbjct: 281 PEVAVANTLVSMYAKCQCLEEAWRLFGLMPRD-DLVTWNGMISGCVQNGLVD 331
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 246/429 (57%), Gaps = 10/429 (2%)
Query: 135 PDCLTFPFLLKEC----TKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
P+ +T +L C + L + SV+ +V+K + + ++ + A
Sbjct: 99 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHL 157
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
A LFD M R V++N +I G +R+G + A ++F M + SW ++I G V+ GR
Sbjct: 158 ALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRH 217
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
EA++ F+ M VE PD +T+ +V+SACA +GA+ G WVH + R GL+ +V I
Sbjct: 218 DEAIDCFRAMLLDGVE----PDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRI 273
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
+L+DMY +CG VE A VF M K+ ++W +MI FA NG +A + F M EG
Sbjct: 274 ANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGF 333
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
+P+ VTF G+L+AC+H GL ++G + +MR Y + + HY C++D+L R+G EA
Sbjct: 334 KPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAM 393
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
R++ +MPM P+ V GALL GC+MHG+V + E++ Q+L++LDP A YV L ++YA G
Sbjct: 394 RVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVG 453
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
++D K R+LMK RG+RK PG S+VE+DG VHEF EE+ +L L M
Sbjct: 454 KWDGAGKVRSLMKARGLRKR-PGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLLMHEM 512
Query: 551 KNGGFGQYI 559
+ I
Sbjct: 513 AGHDYDHVI 521
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 254/456 (55%), Gaps = 36/456 (7%)
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ ++ + + NA S +++ + L++QM G+ + +T L+ C ++
Sbjct: 101 NFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLE 160
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
+G+S++ +K+G DV V N I+++M CG V A+ LFDEM + ++SWNAM+ GY
Sbjct: 161 LGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGY- 219
Query: 215 RSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKI 274
Q G A LEL++ M + V PD +
Sbjct: 220 ------------------------------AQNGLATNVLELYRNMDMNGVH----PDPV 245
Query: 275 TIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEM 334
T+ VLS+CA LGA G V ++ SG + + AL++MY +CG + +A VF M
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 305
Query: 335 PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGR 394
P++ ++WTA+I + ++G+G+ A F+EM G+ P+ FV +LSAC+H+GL ++G
Sbjct: 306 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 365
Query: 395 WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQM 454
F MM+ Y +EP HY+CM+D+L RAG EA+ LI SMP++PD VWGALLG C++
Sbjct: 366 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 425
Query: 455 HGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGC 514
H NVEL E + +I+L+P N +YV L ++Y+ A V + R +MKE+ ++K+ PGC
Sbjct: 426 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKD-PGC 484
Query: 515 SSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
S VE+ G VH F + + +E+ +L L I+
Sbjct: 485 SYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAII 520
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 46/297 (15%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
GS++YA +F + L ++N M+ A TN L+LY+ M G+ PD +
Sbjct: 192 GSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATN------VLELYRNMDMNGVHPDPV 245
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C VG V ++ G + F+ N++I+++ CG +T A+ +FD M
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 305
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
R +VSW A+I GY G ++A+ LF+ M + I
Sbjct: 306 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGI------------------------ 341
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRS-GLDCDVVIGTALVDM 317
+PD VLSAC++ G D G ++R+ L+ + +VD+
Sbjct: 342 -----------EPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDL 390
Query: 318 YGKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNG---YGKEAFDTFREMEAEGV 370
G+ G ++ A + + MP K D W A++ ++ + AF+ E+E E +
Sbjct: 391 LGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENI 447
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 267/487 (54%), Gaps = 44/487 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G ++ A N+F+ + +L ++N MI A + ++ +D + KL+ +M D +
Sbjct: 247 GRMTEARNLFNEMPTKNLVSWNAMIGA-YVRENQIDDAY-----KLFMEM----PEKDSV 296
Query: 139 TFPFLLKECTKRLDGLVGA-------------------SVYGQVVKFGVCDDVFVQ---- 175
++ ++ R+ L+ A + Y Q + +++F Q
Sbjct: 297 SWTAMINGYV-RVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVR 355
Query: 176 -----NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
NS+I+ + CG A LF EM +D+VSWN MI Y ++G +D AL++F M+
Sbjct: 356 DSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQ 415
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+RN+ SWNS+ITG+VQ G EAL F M+ ++ KPD+ TI L A A L A++
Sbjct: 416 ERNVVSWNSLITGYVQNGLYFEALNCFILMK----QQGEKPDQTTIVCCLRASANLAALN 471
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G +H ++G D+ + A++ MY K G V A VF E+ KD ++W ++I+ +A
Sbjct: 472 VGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYA 531
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
LNG GKEA + F M G+ P+ VTF GLLSAC H G V++G F M Y ++P
Sbjct: 532 LNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQS 591
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HYAC+I++L R G EA +++ M +WGALL C++H N+EL + A+ L+
Sbjct: 592 EHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLA 651
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
L+P N + YV L +M+A+AGR+D V++ R LMKE K+ PGCS +E+D +H F K
Sbjct: 652 LEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQ-PGCSWIEIDNQLHCFLSKA 710
Query: 531 SPKVVKE 537
P + E
Sbjct: 711 PPDLRPE 717
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 169/356 (47%), Gaps = 33/356 (9%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
++ NS+IS + G + +AR LFD M R++VSWN+MI GYL + ++ A LF RM
Sbjct: 45 NIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMF 104
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
KR+I+SW +IT + + G +A ELF + K D + ++++ A
Sbjct: 105 KRDIYSWTLMITCYTRIGELEKARELFNLLPD-------KQDTVCRNALIAGYAKKRLFR 157
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
K L L +VV +++ Y K G ++ F+ M +++ ++W M+ +
Sbjct: 158 EAK----KLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYV 213
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
G A+ F+++ PN V++V +LS AH G + + R F M LV
Sbjct: 214 GVGDLDSAWMFFKKIPT----PNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVS--- 266
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV-AQYLI 469
+ MI R +A +L MP E D W A++ +G V +G+ + A+ ++
Sbjct: 267 --WNAMIGAYVRENQIDDAYKLFMEMP-EKDSVSWTAMI-----NGYVRVGKLLQAREIL 318
Query: 470 DLDPL-NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
+L P N A + + Y ++GR D+ + + + +R V C + + G H
Sbjct: 319 NLMPYKNIAAQTAMINGYLQSGRMDEANE---IFSQISVRDSV--CWNSMITGYAH 369
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 157/374 (41%), Gaps = 77/374 (20%)
Query: 84 ATNVFSHIKRSDLYTYNIMIR-----ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
A +F + + D+Y++ +MI K+ E + K + + L G +
Sbjct: 96 AARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAK--- 152
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
L +E K D ++ +V NS++S + G + F+ M
Sbjct: 153 --KRLFREAKKLFDEML-------------VKNVVSWNSILSGYTKNGKMQLGLQFFEAM 197
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
R+VVSWN M+ GY+ GDLD A F+++ N+ SW ++++GF GR EA LF
Sbjct: 198 GERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFN 257
Query: 259 EMQSSSV-----------------------EEMVKPDKITIASVLSACAYLGAIDHGK-- 293
EM + ++ EM + D ++ ++++ +G + +
Sbjct: 258 EMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREI 317
Query: 294 --------------WVHGYLRRSGLD-----------CDVVIGTALVDMYGKCGCVERAY 328
++GYL+ +D D V +++ Y CG + A
Sbjct: 318 LNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEAL 377
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F+EM KD ++W MI+ +A G +A + F EM+ V V++ L++ +G
Sbjct: 378 RLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNV----VSWNSLITGYVQNG 433
Query: 389 LVEKGRWCFVMMRH 402
L + CF++M+
Sbjct: 434 LYFEALNCFILMKQ 447
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 73 CALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG------KCLKLYK 126
A + +G + A +F+ ++ ++ ++N +I T +G C L K
Sbjct: 396 AAYAQAGQMDKALEMFNEMQERNVVSWNSLI---------TGYVQNGLYFEALNCFILMK 446
Query: 127 QMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
Q G PD T L+ VG ++ +K G +D+FV+N++++++ G
Sbjct: 447 Q---QGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSG 503
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV- 245
V A +F E+ N+DVVSWN++I GY +G A++LF M R I TG +
Sbjct: 504 RVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLS 563
Query: 246 ---QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
GG + L LF+ M + +KP A V++ +G ++
Sbjct: 564 ACNHGGFVDQGLNLFKSMTETYS---IKPQSEHYACVINLLGRVGRLEEA 610
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 171/512 (33%), Positives = 272/512 (53%), Gaps = 17/512 (3%)
Query: 46 EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRA 105
E+H+QIIK+ D SL++ L G + A +F + D ++ ++ A
Sbjct: 24 ELHSQIIKA----GFDKSSLLSNTLLD-VYGKCGLIPQALQLFDEMPNRDHVSWASILTA 78
Query: 106 NACKSSETNDTHSGKCLKLYKQMLC-TGISPDCLTFPFLLKECTKRLDGLVGASVYGQVV 164
+ + L + M G+ PD F +++ C+ +G V+ + +
Sbjct: 79 H------NKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFM 132
Query: 165 KFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALD 224
CDD V++S+I ++ CG AR +FD + ++ VSW +MI GY RSG A+D
Sbjct: 133 LSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD 192
Query: 225 LFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACA 284
LF + RN+FSW ++I+G +Q G + LF EM+ ++ + D + ++SV+ CA
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIV---DPLVLSSVVGGCA 249
Query: 285 YLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTA 344
L ++ GK +HG + G + + I ALVDMY KC + A +F MP+KD ++WT+
Sbjct: 250 NLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTS 309
Query: 345 MISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVY 404
+I A +G +EA + EM ++PN VTFVGLL AC+H+GLV +GR F M Y
Sbjct: 310 IIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDY 369
Query: 405 LVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV 464
+ P + HY C++D+LSR+G EAE L+ +P +PD W +LL C H N+E+G ++
Sbjct: 370 SINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRI 429
Query: 465 AQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
A ++DL P + + Y+ L ++YA A + V K R LM +RKE PG SS++
Sbjct: 430 ADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKE-PGYSSIDFGKDSQ 488
Query: 525 EFSMKGS-PKVVKEELVLILNGLSKIMKNGGF 555
F S +K E+ +L L M+ G+
Sbjct: 489 VFHAGESCDHPMKNEICNLLKDLDAEMRKRGY 520
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 165/386 (42%), Gaps = 75/386 (19%)
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
F L+ C +R ++ Q++K G + N+++ ++ CG + A LFDEM
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
NRD V SW SI+T + R L +
Sbjct: 66 NRDHV-------------------------------SWASILTAHNKALIPRRTLSMLNT 94
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
M + + ++PD A ++ AC+ LG + GK VH S D V+ ++L+DMY
Sbjct: 95 MFT---HDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYT 151
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG + A VF + K++++WT+MIS +A +G EA D F + N ++
Sbjct: 152 KCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVR----NLFSWTA 207
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPME 439
L+ SGL++ G +Y ++ LF+E R +
Sbjct: 208 LI-----SGLIQSGH--------------GIYSFS----------LFNEMRREGIDI--- 235
Query: 440 PDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN-LCDMYAKAGRFDDVKKT 498
D V +++GGC +ELG+++ +I L + F N L DMYAK D+
Sbjct: 236 VDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS---DILAA 292
Query: 499 RNLMKERGIRKEVPGCSSVEVDGVVH 524
+++ R RK+V +S+ V H
Sbjct: 293 KDIFY-RMPRKDVISWTSIIVGTAQH 317
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 156/427 (36%), Positives = 239/427 (55%), Gaps = 36/427 (8%)
Query: 122 LKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISL 181
L ++ ML G P+ TF +L C+ D G V+ ++K + D+ FV ++I +
Sbjct: 501 LTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDM 560
Query: 182 FMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSII 241
+ C ++ D DVA F R+ R++F+W II
Sbjct: 561 YAKCMYLE----------------------------DADVA---FNRLSVRDLFTWTVII 589
Query: 242 TGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRR 301
T + Q + +AL F++MQ +E VKP++ T+A LS C+ L +++ G+ +H + +
Sbjct: 590 TNYAQTNQGEKALNYFRQMQ----QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK 645
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
SG D+ +G+ALVDMY KCGC+E A +F+ + ++DT+AW +I +A NG G +A
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTA 705
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
FR M EG+ P+ VTF G+LSAC+H GLVE+G+ F M + + P V H ACM+DIL
Sbjct: 706 FRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILG 765
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
R G F E E I+ M + + +W +LG +MH N+ LGEK A L +L P + Y+
Sbjct: 766 RVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYIL 825
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
L +++A GR+DDVK+ R+LM +G++KE PGCS VE +G VH F +E+ L
Sbjct: 826 LSNIFATEGRWDDVKRVRSLMSSKGVKKE-PGCSWVEANGQVHTFVSHDYSHPQIQEIHL 884
Query: 542 ILNGLSK 548
L+ L +
Sbjct: 885 KLDELDR 891
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 217/509 (42%), Gaps = 85/509 (16%)
Query: 37 ECKNMREL---KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKR 93
EC + R L K IH I+K + D H ++ + + S +YA V + +
Sbjct: 121 ECASKRSLGVAKAIHGLIVKD--VINPDSHLWVSLVNVYAKCRYS---AYARLVLAKMPD 175
Query: 94 SDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDG 153
D+ ++ +I+ + ND+ + L+++M GI P+ T LK C+ +
Sbjct: 176 RDVVSWTALIQGLVAEGF-ANDS-----IYLFQEMQNEGIMPNEFTLATGLKACSLCMAL 229
Query: 154 LVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGY 213
+G ++ Q K G+ D+FV ++++ L+ CG
Sbjct: 230 DLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCG--------------------------- 262
Query: 214 LRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDK 273
++++A +F M ++N +WN ++ G+ Q G L+LF M +E VK ++
Sbjct: 263 ----EIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSM----MELDVKCNE 314
Query: 274 ITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKE 333
T+ +VL CA + G+ +H + + G + + IG LVDMY KCG A GVFK
Sbjct: 315 FTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKT 374
Query: 334 MPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKG 393
+ K D + W+A+I+ G +E+ F M PN T LLSA ++G ++ G
Sbjct: 375 IKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYG 434
Query: 394 R------WCFVMMRHV---------YLVEPHVYH----YACMIDI-----------LSRA 423
+ W + V Y+ V+ Y M+D L
Sbjct: 435 QSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDC 494
Query: 424 GLFSEAERLIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVAQYLI--DLDPLNHAF 478
G++ + M E P+++ + ++LG C +V G +V ++I LD N+
Sbjct: 495 GMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDD-NNFV 553
Query: 479 YVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
L DMYAK +D N + R +
Sbjct: 554 CTALIDMYAKCMYLEDADVAFNRLSVRDL 582
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 172/354 (48%), Gaps = 47/354 (13%)
Query: 140 FPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMS 199
+ +L+EC + V +++G +VK + D + S+++++ C + AR++ +M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+RDVVSW A+I G V G A +++ LFQE
Sbjct: 175 DRDVVSWTALIQG-------------------------------LVAEGFANDSIYLFQE 203
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
MQ+ E + P++ T+A+ L AC+ A+D GK +H + GL D+ +G+ALVD+Y
Sbjct: 204 MQN----EGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYA 259
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG +E A +F MP+++ + W +++ +A G F M V+ N T
Sbjct: 260 KCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTT 319
Query: 380 LLSACAHSGLVEKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAGLFSEAERLIRS 435
+L CA+S +++G+ + H ++ E + + ++D+ S+ GL +A + ++
Sbjct: 320 VLKGCANSKNLKQGQ-----VIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKT 374
Query: 436 MPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKA 489
+ +PD+ VW AL+ G E K+ + D L + + +C + + A
Sbjct: 375 IK-KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQY--TICSLLSAA 425
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 169/394 (42%), Gaps = 54/394 (13%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A+ +F + + T+N+++ A + T LKL+ M+ + +
Sbjct: 262 GEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTG------VLKLFCSMMELDVKCNEF 315
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +LK C + G ++ ++K G + F+ ++ ++ CG A
Sbjct: 316 TLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDA------- 368
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
+ +F+ +KK +I W+++IT Q G++ E+++LF
Sbjct: 369 ------------------------IGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH 404
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
M+ P++ TI S+LSA G + +G+ +H + + G + DV + ALV MY
Sbjct: 405 LMRLGDT----LPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMY 460
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
K GCV +++ M +D ++W A +S G F M EG PN TF+
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV--YHYAC--MIDILSRAGLFSEAERLIR 434
+L +C+ V GR H ++++ + ++ C +ID+ ++ +A+
Sbjct: 521 SILGSCSCLFDVHYGR-----QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFN 575
Query: 435 SMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYL 468
+ + D+F W ++ + GEK Y
Sbjct: 576 RLSVR-DLFTWTVIITN---YAQTNQGEKALNYF 605
>gi|357118743|ref|XP_003561109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Brachypodium distachyon]
Length = 535
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 245/435 (56%), Gaps = 25/435 (5%)
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFG--VCDDVFVQNSVISLFMACGFVTSARMLF 195
L+F FLL + +VK G D F+ ++++S + + AR +F
Sbjct: 88 LSFTFLLSSPAAASHAPFALCSHALLVKSGHFASGDPFLGSALVSFYAKSRLLDEARRVF 147
Query: 196 DEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALE 255
DEM RD +NA++ Y R G +D A LF M +RN+ SW ++++G+ Q GR A+E
Sbjct: 148 DEMPRRDTAVYNALLSAYARCGLVDAAEKLFGEMTERNVVSWTAMVSGYAQNGRHEAAVE 207
Query: 256 LFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALV 315
F EM + V+P+++T++SVL ACA +GA++ G V Y R G +V + AL+
Sbjct: 208 TFLEMWEGA---GVQPNELTVSSVLPACAAVGAMELGTKVEEYARGKGHLGNVFVTNALL 264
Query: 316 DMYGKCGCVERAYGVFKEM-PKKDTLAWTAMISVFALNGYGKEAFDTFREMEAE------ 368
+MY KCG ++RA+ VF+ + ++D +W MI FA++G EA F ++
Sbjct: 265 EMYAKCGSIQRAWQVFQGIGHRRDLCSWNTMIMAFAVHGLWMEALALFHKLRVRISCSNS 324
Query: 369 ------------GVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACM 416
GV+P+ +TFVG++ AC H GLV++G+ F M + + P + HY CM
Sbjct: 325 LVYFFSIPTHMTGVKPDGITFVGVILACTHGGLVDEGKLIFNSMEADFSINPRIEHYGCM 384
Query: 417 IDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNH 476
+D+L RAGL EA +I SMP EPD +WGALLG C HGN+EL E L+ L+P N
Sbjct: 385 VDLLGRAGLLKEAYSMIISMPAEPDAVIWGALLGACSFHGNIELAETAVDKLMYLEPQNT 444
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVK 536
A V L ++YA +G++D V + L+KE+ +K G S +E+DG +H+F ++ +
Sbjct: 445 ANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSA-GYSFIELDGRMHKFLVEDMSHPIF 503
Query: 537 EELVLILNGLSKIMK 551
EE+ L+ ++ IMK
Sbjct: 504 EEIYKTLDSVTMIMK 518
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 267/487 (54%), Gaps = 44/487 (9%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G ++ A N+F+ + +L ++N MI A + ++ +D + KL+ +M D +
Sbjct: 247 GRMTEARNLFNEMPTKNLVSWNAMIGA-YVRENQIDDAY-----KLFMEM----PEKDSV 296
Query: 139 TFPFLLKECTKRLDGLVGA-------------------SVYGQVVKFGVCDDVFVQ---- 175
++ ++ R+ L+ A + Y Q + +++F Q
Sbjct: 297 SWTAMINGYV-RVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVR 355
Query: 176 -----NSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
NS+I+ + CG A LF EM +D+VSWN MI Y ++G +D AL++F M+
Sbjct: 356 DSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQ 415
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
+RN+ SWNS+ITG+VQ G EAL F M+ ++ KPD+ TI L A A L A++
Sbjct: 416 ERNVVSWNSLITGYVQNGLYFEALNCFILMK----QQGEKPDQTTIVCCLRASANLAALN 471
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
G +H ++G D+ + A++ MY K G V A VF E+ KD ++W ++I+ +A
Sbjct: 472 VGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYA 531
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
LNG GKEA + F M G+ P+ VTF GLLSAC H G V++G F M Y ++P
Sbjct: 532 LNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQS 591
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLID 470
HYAC+I++L R G EA +++ M +WGALL C++H N+EL + A+ L+
Sbjct: 592 EHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLA 651
Query: 471 LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKG 530
L+P N + YV L +M+A+AGR+D V++ R LMKE K+ PGCS +E+D +H F K
Sbjct: 652 LEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQ-PGCSWIEIDNQLHCFLSKA 710
Query: 531 SPKVVKE 537
P + E
Sbjct: 711 PPDLRPE 717
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 169/356 (47%), Gaps = 33/356 (9%)
Query: 171 DVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMK 230
++ NS+IS + G + +AR LFD M R++VSWN+MI GYL + ++ A LF RM
Sbjct: 45 NIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMF 104
Query: 231 KRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAID 290
KR+I+SW +IT + + G +A ELF + K D + ++++ A
Sbjct: 105 KRDIYSWTLMITCYTRIGELEKARELFNLLPD-------KQDTVCRNALIAGYAKKRLFR 157
Query: 291 HGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFA 350
K L L +VV +++ Y K G ++ F+ M +++ ++W M+ +
Sbjct: 158 EAK----KLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYV 213
Query: 351 LNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHV 410
G A+ F+++ PN V++V +LS AH G + + R F M LV
Sbjct: 214 GVGDLDSAWMFFKKIPT----PNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVS--- 266
Query: 411 YHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKV-AQYLI 469
+ MI R +A +L MP E D W A++ +G V +G+ + A+ ++
Sbjct: 267 --WNAMIGAYVRENQIDDAYKLFMEMP-EKDSVSWTAMI-----NGYVRVGKLLQAREIL 318
Query: 470 DLDPL-NHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVH 524
+L P N A + + Y ++GR D+ + + + +R V C + + G H
Sbjct: 319 NLMPYKNIAAQTAMINGYLQSGRMDEANE---IFSQISVRDSV--CWNSMITGYAH 369
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 157/374 (41%), Gaps = 77/374 (20%)
Query: 84 ATNVFSHIKRSDLYTYNIMIR-----ANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
A +F + + D+Y++ +MI K+ E + K + + L G +
Sbjct: 96 AARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAK--- 152
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
L +E K D ++ +V NS++S + G + F+ M
Sbjct: 153 --KRLFREAKKLFDEML-------------VKNVVSWNSILSGYTKNGKMQLGLQFFEAM 197
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
R+VVSWN M+ GY+ GDLD A F+++ N+ SW ++++GF GR EA LF
Sbjct: 198 GERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFN 257
Query: 259 EMQSSSV-----------------------EEMVKPDKITIASVLSACAYLGAIDHGK-- 293
EM + ++ EM + D ++ ++++ +G + +
Sbjct: 258 EMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREI 317
Query: 294 --------------WVHGYLRRSGLD-----------CDVVIGTALVDMYGKCGCVERAY 328
++GYL+ +D D V +++ Y CG + A
Sbjct: 318 LNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEAL 377
Query: 329 GVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSG 388
+F+EM KD ++W MI+ +A G +A + F EM+ V V++ L++ +G
Sbjct: 378 RLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNV----VSWNSLITGYVQNG 433
Query: 389 LVEKGRWCFVMMRH 402
L + CF++M+
Sbjct: 434 LYFEALNCFILMKQ 447
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 25/230 (10%)
Query: 73 CALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSG------KCLKLYK 126
A + +G + A +F+ ++ ++ ++N +I T +G C L K
Sbjct: 396 AAYAQAGQMDKALEMFNEMQERNVVSWNSLI---------TGYVQNGLYFEALNCFILMK 446
Query: 127 QMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACG 186
Q G PD T L+ VG ++ +K G +D+FV+N++++++ G
Sbjct: 447 Q---QGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSG 503
Query: 187 FVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFV- 245
V A +F E+ +DVVSWN++I GY +G A++LF M R I TG +
Sbjct: 504 RVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLS 563
Query: 246 ---QGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG 292
GG + L LF+ M + +KP A V++ +G ++
Sbjct: 564 ACNHGGFVDQGLNLFKSMTETYS---IKPQSEHYACVINLLGRVGRLEEA 610
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 287/554 (51%), Gaps = 49/554 (8%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
I CK ++ LK IH +++ + +++ +I +LL S G+ YA VF I +
Sbjct: 9 IHNCKTLKSLKSIHARLLIESSVASSEF--VINKLLRL--YSRFGATDYAHKVFDEITQP 64
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+ Y + +I + + L+ QM IS T +LK +
Sbjct: 65 NAYLWTSLIHG------YVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFK 118
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G +VYG D+ N +IS + V AR FD M R+VVSW +MI GY+
Sbjct: 119 GGQAVYGFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYV 178
Query: 215 RSGDL---DVALD-----------------------------LFRRMKKRNIFSWNSIIT 242
++GD+ V D LF +M +N+ +W+++I
Sbjct: 179 KAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIG 238
Query: 243 GFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGK-WVHGYLRR 301
G+ + G+ +ALELF+ + E+ +KPD+ I ++SAC+ LG ID + +H Y+
Sbjct: 239 GYARNGQPLKALELFERFK----EQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGP 294
Query: 302 SGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDT 361
S L D+ + T+L+DMY KCG +E+A +F+ KD L ++ MI+ A +G G++A
Sbjct: 295 SLLS-DLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFL 353
Query: 362 FREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILS 421
F +M+ ++P+ VTF+G+L+AC H GLV++GR F M + ++P HYAC++D+L
Sbjct: 354 FDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLG 413
Query: 422 RAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVN 481
R G EA LIR+MP+ P VWGALL C++H NV+L E A L ++P N Y+
Sbjct: 414 RVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYIL 473
Query: 482 LCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVL 541
L ++YA AGR+ V K R ++E +RK G S +E+ VVHEF M + + L
Sbjct: 474 LSNIYAAAGRWGSVAKVRAKIREHRVRKN-RGSSWIELSHVVHEFVMGDMSHTDSDSISL 532
Query: 542 ILNGLSKIMKNGGF 555
IL L + MK G+
Sbjct: 533 ILYLLCEDMKLSGY 546
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 183/542 (33%), Positives = 285/542 (52%), Gaps = 55/542 (10%)
Query: 18 KVSPPNK-ESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALS 76
++SPP + S L AI C ++ IH ++IKS N I L +S
Sbjct: 54 QLSPPFQVYSIVQSLVFAISSCTSVSYCSAIHARVIKS----LNYSDGFIGDRL----VS 105
Query: 77 VSGSLSY---ATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLC-TG 132
+ L Y A +F + DL ++N ++ S + + G CL + +M +G
Sbjct: 106 MYFKLGYDEDAQRLFDEMPNKDLVSWNSLM------SGLSGRGYLGACLNAFCRMRTESG 159
Query: 133 ISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSAR 192
P+ +T ++ C G S++G VVK G+ V NS+I+++ GF
Sbjct: 160 RQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGF----- 214
Query: 193 MLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRARE 252
LD A LF M R++ SWNS++ G A +
Sbjct: 215 --------------------------LDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEK 248
Query: 253 ALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGT 312
++LF M+ + + PD+ T+ ++L AC G + +H Y+ R G + D++I T
Sbjct: 249 GMDLFNLMKRAGI----NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIAT 304
Query: 313 ALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRP 372
AL+++Y K G + + +F+E+ +D +AWTAM++ +A++ G+EA F M EGV
Sbjct: 305 ALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEV 364
Query: 373 NHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERL 432
+HVTF LLSAC+HSGLVE+G+ F +M VY VEP + HY+CM+D+L R+G +A L
Sbjct: 365 DHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYEL 424
Query: 433 IRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRF 492
I+SMPMEP VWGALLG C+++GNVELG++VA+ L+ LDP +H Y+ L ++Y+ AG +
Sbjct: 425 IKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLW 484
Query: 493 DDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
D K R LMKER + + PGCS +E +H F + +E+ L L + ++
Sbjct: 485 RDASKVRALMKERRLTRN-PGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIRE 543
Query: 553 GG 554
G
Sbjct: 544 AG 545
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 285/532 (53%), Gaps = 51/532 (9%)
Query: 25 ESTKLILRNAIDECKNMRELK---EIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSL 81
E + + AI C + +L EIH ++I S L + S + + C G L
Sbjct: 204 EPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKC-----GHL 258
Query: 82 SYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFP 141
A +F + + + +N MI K + C++L+K+M G+ P T
Sbjct: 259 EMAIEIFEQMPKKTVVAWNSMISGYGLKGDIIS------CIQLFKRMYNEGVKPTLTTLS 312
Query: 142 FLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNR 201
L+ C++ L G V+G ++ + DVFV +S++ L+ CG V
Sbjct: 313 SLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKV------------- 359
Query: 202 DVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQ 261
++A +F+ + K + SWN +I+G+V G+ EAL LF EM+
Sbjct: 360 ------------------ELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMR 401
Query: 262 SSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKC 321
S VE D IT SVL+AC+ L A++ GK +H + LD + V+ AL+DMY KC
Sbjct: 402 KSYVES----DAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKC 457
Query: 322 GCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLL 381
G V+ A+ VFK +PK+D ++WT+MI+ + +G+ A + F EM V+P+ V F+ +L
Sbjct: 458 GAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAIL 517
Query: 382 SACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP-MEP 440
SAC H+GLV++G + F M +VY + P V HY+C+ID+L RAG EA +++ P +
Sbjct: 518 SACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRD 577
Query: 441 DVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRN 500
DV + L C++H N++LG ++A+ LID DP + + Y+ L +MYA A ++D+V+ R+
Sbjct: 578 DVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRS 637
Query: 501 LMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKN 552
MKE G++K PGCS +E++ + F ++ + + E + L+ LS M++
Sbjct: 638 KMKELGLKKN-PGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMED 688
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 230/522 (44%), Gaps = 111/522 (21%)
Query: 38 CKNMRELKE---IHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
C N + LK+ IH +++ + LQ + +F C ++ LS +++ H K
Sbjct: 13 CMNSKSLKQGKLIHQKVV-TLGLQND---------IFLCKTLINQYLS--CHLYDHAK-- 58
Query: 95 DLYTYNIMIRANACKSSETNDTHSG--------KCLKLYKQML-CTGISPDCLTFPFLLK 145
++ M N C+ S N +G + L+L++++L + PD T+P + K
Sbjct: 59 --CVFDNM--ENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFK 114
Query: 146 ECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVS 205
C ++G ++ ++K G+ D+ V +S++ ++ C A LF+E
Sbjct: 115 ACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNE-------- 166
Query: 206 WNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSV 265
M ++++ WN++I+ + Q G ++ALE F M+
Sbjct: 167 -----------------------MPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGF 203
Query: 266 EEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVE 325
E P+ +TI + +S+CA L ++ G +H L SG D I +ALVDMYGKCG +E
Sbjct: 204 E----PNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLE 259
Query: 326 RAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACA 385
A +F++MPKK +AW +MIS + L G F+ M EGV+P T L+ C+
Sbjct: 260 MAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCS 319
Query: 386 HSGLVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIRSMP---- 437
S + +G++ H Y ++P V+ + ++D+ + G AE++ + +P
Sbjct: 320 RSARLLEGKFV-----HGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKV 374
Query: 438 ------------------------------MEPDVFVWGALLGGCQMHGNVELGEKVAQY 467
+E D + ++L C +E G+++
Sbjct: 375 VSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNL 434
Query: 468 LID--LDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
+I+ LD N L DMYAK G D+ + +R +
Sbjct: 435 IIEKKLDN-NEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDL 475
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 22/197 (11%)
Query: 272 DKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF 331
D + +L AC ++ GK +H + GL D+ + L++ Y C + A VF
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61
Query: 332 KEMPKKDTLA-WTAMISVFALNGYGKEAFDTFRE-MEAEGVRPNHVTFVGLLSACAHSGL 389
M ++ W +++ + N EA + F + + ++P+ T+ + AC GL
Sbjct: 62 DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACG--GL 119
Query: 390 VEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGL---------FSEAERLIRSMPMEP 440
R+ M H L++ M+DI+ + L F +A L MP E
Sbjct: 120 ---HRYVLGKMIHTCLIKT-----GLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMP-EK 170
Query: 441 DVFVWGALLGGCQMHGN 457
DV W ++ GN
Sbjct: 171 DVACWNTVISCYYQSGN 187
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 181/519 (34%), Positives = 276/519 (53%), Gaps = 51/519 (9%)
Query: 38 CKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLY 97
C +++ L +IH+QI S LQ + L+T+L+ F +LS S LSYA ++ H
Sbjct: 674 CSSIKHLYQIHSQIQVS-GLQGDTF--LVTQLIKFSSLSPSKDLSYAQSILDHSVHPVPL 730
Query: 98 TYNIMIRANACKSSETNDTHSGK-CLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVG 156
+NI+IR A D+++ K L +Y+ M GI P+ LTFPFLLK C G
Sbjct: 731 PWNILIRGYA-------DSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEG 783
Query: 157 ASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRS 216
V+ +V+K+G+ DV+V N++++ + +C + A +FDEM R VV
Sbjct: 784 KQVHVEVIKYGLDCDVYVNNNLVNFYGSCKKILDACKVFDEMPERTVV------------ 831
Query: 217 GDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITI 276
SWN++IT V+ + EA+ F +M+ E PD T+
Sbjct: 832 -------------------SWNAVITSCVESLKLGEAIRYFLKMRDFGFE----PDGTTM 868
Query: 277 ASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPK 336
+L CA +G + G+W+H + GL + +GTALVDMY K G V A VF M +
Sbjct: 869 VLMLVICAEMGNLGLGRWIHSQVIERGLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMKE 928
Query: 337 KDTLAWTAMISVFALNGYGKEAFDTFREM-EAEGVRPNHVTFVGLLSACAHSGLVEKGRW 395
K+ W+AMI A +G+ KE + F +M + + PN+VTF+G+L AC+H+GLV G
Sbjct: 929 KNVWTWSAMILGLAQHGFAKEGLELFLDMMRSSLIHPNYVTFLGVLCACSHAGLVSDGFR 988
Query: 396 CFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMH 455
F M H Y ++P + HY M+DIL RAGL EA I MP +PD VW LL C +H
Sbjct: 989 YFHEMGHTYGIKPMMVHYGAMVDILGRAGLLKEAYNFITKMPFQPDPIVWRTLLSACSIH 1048
Query: 456 ---GNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVP 512
+ + KV + L++L+P +V + +MYA AG ++ K R +M++ G++K+
Sbjct: 1049 DVKDSTGVAYKVRKRLLELEPRRSGNFVMVANMYADAGMWEKAAKVRRVMRDGGLKKKA- 1107
Query: 513 GCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMK 551
G S VE+ G +H F + KE + +L+GL+ M+
Sbjct: 1108 GESCVELSGSIHRFFSGYDSQDDKEGMYQLLDGLNLHMQ 1146
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 118/299 (39%), Gaps = 45/299 (15%)
Query: 245 VQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGL 304
+ G R L F ++ + VE + S+L C+ +I H +H ++ SGL
Sbjct: 642 LTGDEFRAILSEFTDISGAQVE------RTPCLSLLKLCS---SIKHLYQIHSQIQVSGL 692
Query: 305 DCDVVIGTALVDMYGKCGCVERAYG--VFKEMPKKDTLAWTAMISVFALNGYGKEAFDTF 362
D + T L+ + +Y + L W +I +A + K+A +
Sbjct: 693 QGDTFLVTQLIKFSSLSPSKDLSYAQSILDHSVHPVPLPWNILIRGYADSNTPKDALFVY 752
Query: 363 REMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFV-MMRH-----VYLVEPHVYHYACM 416
R M EG+RPN +TF LL ACA ++G+ V ++++ VY+ V Y
Sbjct: 753 RNMRNEGIRPNSLTFPFLLKACAACFATKEGKQVHVEVIKYGLDCDVYVNNNLVNFYGSC 812
Query: 417 IDILSRAGLFSE-AERLI--------------------------RSMPMEPDVFVWGALL 449
IL +F E ER + R EPD +L
Sbjct: 813 KKILDACKVFDEMPERTVVSWNAVITSCVESLKLGEAIRYFLKMRDFGFEPDGTTMVLML 872
Query: 450 GGCQMHGNVELGEKVAQYLIDLD-PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGI 507
C GN+ LG + +I+ LN+ L DMYAK+G K + MKE+ +
Sbjct: 873 VICAEMGNLGLGRWIHSQVIERGLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMKEKNV 931
>gi|242054925|ref|XP_002456608.1| hypothetical protein SORBIDRAFT_03g039300 [Sorghum bicolor]
gi|241928583|gb|EES01728.1| hypothetical protein SORBIDRAFT_03g039300 [Sorghum bicolor]
Length = 458
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 248/429 (57%), Gaps = 11/429 (2%)
Query: 102 MIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYG 161
++ A A + T L L+ Q+L G++P+ TF +L+ T G ++
Sbjct: 6 VVSATAAIGALTRRGRHRDALALFSQVLADGVAPNEFTFGTVLRSATALRAPRAGVQLHA 65
Query: 162 QVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDV 221
K G+C +VFV ++++ + G + A + D+ +VVS+ A+I G L++G D
Sbjct: 66 CAAKLGLCSNVFVGSALLDHYAKMGAMREAHGVLDDTREPNVVSYTALIAGLLKNGMFDE 125
Query: 222 ALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLS 281
A LFRRM +RN+ SWN++I G Q G + EA+ LF EM E V P++ T VL+
Sbjct: 126 ADRLFRRMPERNVVSWNAMIGGCSQAGLSEEAVNLFLEM----CREGVTPNESTFPCVLT 181
Query: 282 ACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLA 341
+ A GA+ G+ VH + DV IG +LV Y +CG +E + FK+M +K+ ++
Sbjct: 182 SVANAGALGVGRSVHASAIKFLGKLDVYIGNSLVSFYARCGSLEDSVLAFKKMNRKNVVS 241
Query: 342 WTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMR 401
W A+I +A NG G+EA D +R M A G++P++VT +GLL C H+GLV++G + + +
Sbjct: 242 WNALICGYAQNGKGEEALDAYRMMRATGLKPDNVTLLGLLFGCNHAGLVDEG---YALFK 298
Query: 402 HVYLVEPHVY---HYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGNV 458
+ +P + HYAC++D+LSRA F A+R + +P EP + W AL+GGCQ+H N
Sbjct: 299 TTEMEQPGILKPEHYACVVDLLSRAKRFDNAKRFLEELPFEPGIGFWKALVGGCQIHWNR 358
Query: 459 ELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVE 518
EL E VA+ + LDP + + Y+ L ++Y+ +G + V R +KE+G+ K + GCS +E
Sbjct: 359 ELAESVAKRIHALDPKDTSSYILLSNVYSASGSWQSVSMIRREIKEKGL-KRITGCSWIE 417
Query: 519 VDGVVHEFS 527
V VH FS
Sbjct: 418 VHDKVHVFS 426
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 145/366 (39%), Gaps = 101/366 (27%)
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M +RDVVS A I R GR R+AL LF
Sbjct: 1 MPHRDVVSATAAIGALTRR-------------------------------GRHRDALALF 29
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
++ + + V P++ T +VL + L A G +H + GL +V +G+AL+D
Sbjct: 30 SQV----LADGVAPNEFTFGTVLRSATALRAPRAGVQLHACAAKLGLCSNVFVGSALLDH 85
Query: 318 YGKCGCVERAYGV-------------------------------FKEMPKKDTLAWTAMI 346
Y K G + A+GV F+ MP+++ ++W AMI
Sbjct: 86 YAKMGAMREAHGVLDDTREPNVVSYTALIAGLLKNGMFDEADRLFRRMPERNVVSWNAMI 145
Query: 347 SVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWC------FVMM 400
+ G +EA + F EM EGV PN TF +L++ A++G + GR F+
Sbjct: 146 GGCSQAGLSEEAVNLFLEMCREGVTPNESTFPCVLTSVANAGALGVGRSVHASAIKFLGK 205
Query: 401 RHVYLVEPHVYHYA---------CMIDILSRAGLFS------------------EAERLI 433
VY+ V YA ++R + S +A R++
Sbjct: 206 LDVYIGNSLVSFYARCGSLEDSVLAFKKMNRKNVVSWNALICGYAQNGKGEEALDAYRMM 265
Query: 434 RSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDP--LNHAFYVNLCDMYAKAGR 491
R+ ++PD LL GC G V+ G + + P L Y + D+ ++A R
Sbjct: 266 RATGLKPDNVTLLGLLFGCNHAGLVDEGYALFKTTEMEQPGILKPEHYACVVDLLSRAKR 325
Query: 492 FDDVKK 497
FD+ K+
Sbjct: 326 FDNAKR 331
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 246/429 (57%), Gaps = 10/429 (2%)
Query: 135 PDCLTFPFLLKEC----TKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTS 190
P+ +T +L C + L + SV+ +V+K + + ++ + A
Sbjct: 10 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHL 68
Query: 191 ARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRA 250
A LFD M R V++N +I G +R+G + A ++F M + SW ++I G V+ GR
Sbjct: 69 ALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRH 128
Query: 251 REALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVI 310
EA++ F+ M VE PD +T+ +V+SACA +GA+ G WVH + R GL+ +V I
Sbjct: 129 DEAIDCFRAMLLDGVE----PDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRI 184
Query: 311 GTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGV 370
+L+DMY +CG VE A VF M K+ ++W +MI FA NG +A + F M EG
Sbjct: 185 ANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGF 244
Query: 371 RPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAE 430
+P+ VTF G+L+AC+H GL ++G + +MR Y + + HY C++D+L R+G EA
Sbjct: 245 KPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAM 304
Query: 431 RLIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAG 490
R++ +MPM P+ V GALL GC+MHG+V + E++ Q+L++LDP A YV L ++YA G
Sbjct: 305 RVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVG 364
Query: 491 RFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIM 550
++D K R+LMK RG+RK PG S+VE+DG VHEF EE+ +L L M
Sbjct: 365 KWDGAGKVRSLMKARGLRKR-PGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLLMHEM 423
Query: 551 KNGGFGQYI 559
+ I
Sbjct: 424 AGHDYDHVI 432
>gi|41469497|gb|AAS07282.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 476
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 260/489 (53%), Gaps = 18/489 (3%)
Query: 41 MRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRSDLYTYN 100
M L+++H ++KS + +R + FCA +YA + H R + + +N
Sbjct: 1 MAHLRQLHAALVKSGLARDP---IAASRAVAFCA-GDGRDAAYAARLVRHHPRPNAFMWN 56
Query: 101 IMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVY 160
IRA A + G + L+ ML + P+ TFP L + GA ++
Sbjct: 57 TAIRALA------DGPGPGAAVALFVDMLGSPTPPERRTFPSLFAAYARLGRAGDGAGLH 110
Query: 161 GQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLD 220
G VVK G+ D +V+NSVI+++ + G A L D V+ N+ I+ R+G +D
Sbjct: 111 GMVVKLGLGGDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACNSAIVALARAGRVD 170
Query: 221 VALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVL 280
A +F M R + +W+++++ + + R +A+ELF MQ+ VE P+ + SVL
Sbjct: 171 EARAVFDGMPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVE----PNANVLVSVL 226
Query: 281 SACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVF---KEMPKK 337
CA LGA++ G WVH Y+ + + + ++ TALVDMY KCG + +A VF + +
Sbjct: 227 GCCASLGALEQGAWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRGQA 286
Query: 338 DTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCF 397
+W +M+ A++G +EA F E+ G+RP++VTF+ +L A HSG+ ++ +
Sbjct: 287 KLSSWNSMMLGHAVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKAVL 346
Query: 398 VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN 457
M + V P V HY C++D L+RAG EAE I +MP+ PD VWGALL GC++HG+
Sbjct: 347 ASMASEHGVVPGVEHYGCLVDALARAGRLREAEGAIAAMPVAPDAAVWGALLSGCRLHGD 406
Query: 458 VELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSV 517
E + A+ + DP + YV A+ G R M+E G+ K VPGCS +
Sbjct: 407 AEAAARAAREAVRCDPRDSGAYVLAASALARGGEARRGAAVRGRMREEGVGK-VPGCSMI 465
Query: 518 EVDGVVHEF 526
EVDGVVHEF
Sbjct: 466 EVDGVVHEF 474
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/430 (38%), Positives = 250/430 (58%), Gaps = 13/430 (3%)
Query: 119 GKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGV-CDDVFVQNS 177
+ K + M G+ P+ +T LL C G S++G K G+ + V V +
Sbjct: 46 AEAAKEFTAMRLAGVEPNHITLIALLSGCADCEP--FGDSLHGYACKLGLDRNQVMVGTA 103
Query: 178 VISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSW 237
++ ++ AR++FD + +++ V+WN MI GY+RSG +D A +F M +R++ SW
Sbjct: 104 ILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMRSGRVDDAAKVFDEMPERDLISW 163
Query: 238 NSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHG 297
++I GFV+ G EAL F+EMQ S V KPD + + + L+ACA LGA+ G WVH
Sbjct: 164 TAMINGFVKKGLHEEALAWFREMQVSGV----KPDYVAVIAALAACANLGALSFGLWVHR 219
Query: 298 YLRRSGLDCDVVIGTALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKE 357
++ +V + +L+D+Y +CGCVE A VF EM K+ ++W ++I FA NG+ E
Sbjct: 220 FVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKRTVVSWNSVIVGFAANGHAHE 279
Query: 358 AFDTFREMEAEGVRPNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMI 417
+ FR M+ E +P+ VTF G L+AC+H GLVE+G F M+ Y + P + HY C++
Sbjct: 280 SLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIEHYGCLV 339
Query: 418 DILSRAGLFSEAERLIRSMPMEPDVFVWGALLGGCQMHGN-VELGEKVAQYLIDLDPLNH 476
D+ SRAG EA +++ SMPM+P+ V G+LL C+ HGN EL E++ + L +L H
Sbjct: 340 DLYSRAGRLEEALKVVESMPMKPNEVVIGSLLAACRTHGNDTELAERMMKRLSELKVKGH 399
Query: 477 AFYVNLCDMYAKAGRFDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKV-- 534
+ YV L +MYA G+++ K R MK G++K+ PG SS+E+D H F S V
Sbjct: 400 SNYVILSNMYAADGQWEGASKMRRKMKGLGLKKQ-PGFSSIEIDDRTHVFMAGDSAHVEN 458
Query: 535 --VKEELVLI 542
++E L LI
Sbjct: 459 GYIREVLELI 468
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 78 SGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDC 137
SG + A VF + DL ++ MI K + L +++M +G+ PD
Sbjct: 142 SGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHE------EALAWFREMQVSGVKPDY 195
Query: 138 LTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDE 197
+ L C G V+ VV ++V V NS+I L+ CG V AR +FDE
Sbjct: 196 VAVIAALAACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDE 255
Query: 198 MSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
M R VVSWN++I+G+ +G +L FRRM+
Sbjct: 256 MEKRTVVSWNSVIVGFAANGHAHESLVYFRRMQ--------------------------- 288
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHG-KWVHGYLRRSGLDCDVVIGTALVD 316
EE KPD +T L+AC+++G ++ G ++ R + + LVD
Sbjct: 289 --------EERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIEHYGCLVD 340
Query: 317 MYGKCGCVERAYGVFKEMPKK 337
+Y + G +E A V + MP K
Sbjct: 341 LYSRAGRLEEALKVVESMPMK 361
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 147/336 (43%), Gaps = 87/336 (25%)
Query: 236 SWNSIITGFVQGGRAREALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWV 295
SW S IT + GR EA + F M+ + VE P+ IT+ ++LS CA G +
Sbjct: 31 SWTSRITLLSRNGRLAEAAKEFTAMRLAGVE----PNHITLIALLSGCADCEPF--GDSL 84
Query: 296 HGYLRRSGLDCD-VVIGTALVDMYGK-------------------------------CGC 323
HGY + GLD + V++GTA++ MY K G
Sbjct: 85 HGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMRSGR 144
Query: 324 VERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSA 383
V+ A VF EMP++D ++WTAMI+ F G +EA FREM+ GV+P++V + L+A
Sbjct: 145 VDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAALAA 204
Query: 384 CAHSGLVEKGRWCFVMMRHVYLV----EPHVYHYACMIDILSRAG-------LFSEAER- 431
CA+ G + G W H ++V + +V +ID+ R G +F E E+
Sbjct: 205 CANLGALSFGLWV-----HRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKR 259
Query: 432 -----------------------LIRSMPME---PDVFVWGALLGGCQMHGNVELGEKVA 465
R M E PD + L C G VE G +
Sbjct: 260 TVVSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYF 319
Query: 466 QYL---IDLDP-LNHAFYVNLCDMYAKAGRFDDVKK 497
+ + + P + H Y L D+Y++AGR ++ K
Sbjct: 320 EAMKRDYRISPRIEH--YGCLVDLYSRAGRLEEALK 353
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 32/143 (22%)
Query: 339 TLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS----------- 387
T++WT+ I++ + NG EA F M GV PNH+T + LLS CA
Sbjct: 29 TVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEPFGDSLHGYA 88
Query: 388 -----------------GLVEKGRWCFVMMRHVY--LVEPHVYHYACMIDILSRAGLFSE 428
G+ K R F R V+ + + + + MID R+G +
Sbjct: 89 CKLGLDRNQVMVGTAILGMYSKRR-RFRKARLVFDRVEDKNSVTWNTMIDGYMRSGRVDD 147
Query: 429 AERLIRSMPMEPDVFVWGALLGG 451
A ++ MP E D+ W A++ G
Sbjct: 148 AAKVFDEMP-ERDLISWTAMING 169
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 256/478 (53%), Gaps = 43/478 (8%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G + A F+ + D+ T+N +I A + D ++ + ++ ++ + I+PD
Sbjct: 479 GFFTAALTTFNRMSSRDIVTWNSLINGYA----QIGDPYNA--IDMFYKLRLSAINPDAG 532
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T ++ C D G ++G +VK G D V+N++I ++ CG + SA LF++
Sbjct: 533 TMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKT 592
Query: 199 S-NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELF 257
+D V+ WN II ++Q G A+EA+ F
Sbjct: 593 DFTKDEVT-------------------------------WNVIIAAYMQNGHAKEAISSF 621
Query: 258 QEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDM 317
+M+ E P+ +T SVL A AYL A G H + + G + ++G +L+DM
Sbjct: 622 HQMRL----ENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDM 677
Query: 318 YGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
Y KCG + + +F EM KDT++W AM+S +A++G+G A F M+ V+ + V+F
Sbjct: 678 YAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSF 737
Query: 378 VGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
V +LSAC H GLVE+GR F M Y ++P + HYACM+D+L RAGLF E I+ MP
Sbjct: 738 VSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMP 797
Query: 438 MEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKK 497
+EPD VWGALLG C+MH NV+LGE +L+ L+P N A +V L +YA++GR+ D K
Sbjct: 798 VEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGK 857
Query: 498 TRNLMKERGIRKEVPGCSSVEVDGVVHEFSMKGSPKVVKEELVLILNGLSKIMKNGGF 555
R+ M + G++K PGCS VE+ VH F + E + L+ N L + M+ G+
Sbjct: 858 ARSKMNDLGLKK-TPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGY 914
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 222/489 (45%), Gaps = 82/489 (16%)
Query: 35 IDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNVFSHIKRS 94
+ CK++ L +IH QII S HH IT L+ +L L A +VF
Sbjct: 39 LSSCKHLNPLLQIHAQIIVSGF----KHHHSITHLINLYSLFHKCDL--ARSVFDSTPNP 92
Query: 95 DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKECTKRLDGL 154
+N MIRA +S + N+ L++Y M+ G+ PD TF F+LK CT L+
Sbjct: 93 SRILWNSMIRAYT-RSKQYNEA-----LEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQ 146
Query: 155 VGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWNAMIIGYL 214
G +G++ + G+ DVF+ ++ ++ G + AR +FD+M RDVV+WNAMI G
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLS 206
Query: 215 RSGDLDVALDLFRRMKK--------------------------RNIFSW----------- 237
+S D A+D FR M+ R+I +
Sbjct: 207 QSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS 266
Query: 238 NSIITGFVQGGRAREALELFQEMQSSS-----------------VEEMVKPDK-----IT 275
N +I + + G A +F +M VE + DK +
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 276 IASVLSACAYLGA-----IDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERAYGV 330
I V + A+L A ++ GK +HG + +D D+++ T L+ MY KCG E+A +
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 331 FKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHSGLV 390
F + +D +AW+A+I+ GY +EA F+EM+ + ++PN VT + +L ACA L+
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 391 EKGR--WCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMPMEPDVFVWGAL 448
+ G+ CF + ++ + ++ + ++ G F+ A M D+ W +L
Sbjct: 447 KLGKSIHCFTVKAD---MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSL 502
Query: 449 LGGCQMHGN 457
+ G G+
Sbjct: 503 INGYAQIGD 511
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 178/383 (46%), Gaps = 50/383 (13%)
Query: 79 GSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCL 138
G A +F ++ DL ++ +I A + + L L+++M + P+ +
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAA------LVQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T +L C +G S++ VK + D+ +++S++ CGF T+A F+ M
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
S+RD+V+WN++I GY + GD A+D+F +++ I
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAI------------------------ 527
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
PD T+ V+ ACA L +D G +HG + + G + D + AL+DMY
Sbjct: 528 -----------NPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576
Query: 319 GKCGCVERAYGVFKEMP-KKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTF 377
KCG + A +F + KD + W +I+ + NG+ KEA +F +M E PN VTF
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 636
Query: 378 VGLLSACAHSGLVEKG---RWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIR 434
V +L A A+ +G C + M +L V + +ID+ ++ G +E+L
Sbjct: 637 VSVLPAAAYLAAFREGMAFHACIIQMG--FLSNTLVGN--SLIDMYAKCGQLXYSEKLFN 692
Query: 435 SMPMEPDVFVWGALLGGCQMHGN 457
M + D W A+L G +HG+
Sbjct: 693 EMDHK-DTVSWNAMLSGYAVHGH 714
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 139/262 (53%), Gaps = 9/262 (3%)
Query: 200 NRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQE 259
+ D++ +++ Y + G+ + A LF ++ R++ +W++II VQ G EAL LFQE
Sbjct: 361 DSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420
Query: 260 MQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYG 319
MQ+ + +KP+++T+ S+L ACA L + GK +H + ++ +D D+ GTALV MY
Sbjct: 421 MQN----QKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYA 476
Query: 320 KCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVG 379
KCG A F M +D + W ++I+ +A G A D F ++ + P+ T VG
Sbjct: 477 KCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVG 536
Query: 380 LLSACAHSGLVEKGRWCF--VMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP 437
++ ACA +++G C ++++ + + HV + +ID+ ++ G AE L
Sbjct: 537 VVPACALLNDLDQGT-CIHGLIVKLGFESDCHVKN--ALIDMYAKCGSLPSAEFLFNKTD 593
Query: 438 MEPDVFVWGALLGGCQMHGNVE 459
D W ++ +G+ +
Sbjct: 594 FTKDEVTWNVIIAAYMQNGHAK 615
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 272/515 (52%), Gaps = 21/515 (4%)
Query: 17 AKVSPPNKESTKLILRNAI-----DECKNMRELKEIHTQIIKSPCLQTNDHHSLITRLLF 71
A + P+ S LR I KN + ++ IH IK+ Q D L
Sbjct: 11 ANLPNPHSSSHDSNLRRVIISLLHKNRKNPKHVQSIHCHAIKTRTSQ--DPFVAFELLRV 68
Query: 72 FCALSVSGSLSYATNVFSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCT 131
+C ++ + +A +F + ++Y Y +I S T+ + L+ QM+
Sbjct: 69 YCKVNY---IDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTD------AINLFCQMVRK 119
Query: 132 GISPDCLTFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSA 191
+ D +LK C + G V+G V+K G+ D + ++ L+ CG + A
Sbjct: 120 HVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDA 179
Query: 192 RMLFDEMSNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAR 251
R +FD M RDVV+ MI G ++ A+++F M R+ W +I G V+ G
Sbjct: 180 RKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFN 239
Query: 252 EALELFQEMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIG 311
LE+F+EMQ VE P+++T VLSACA LGA++ G+W+H Y+R+ G++ + +
Sbjct: 240 RGLEVFREMQVKGVE----PNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVA 295
Query: 312 TALVDMYGKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVR 371
AL++MY +CG ++ A +F + KD + +MI AL+G EA + F EM E VR
Sbjct: 296 GALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVR 355
Query: 372 PNHVTFVGLLSACAHSGLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAER 431
PN +TFVG+L+AC+H GLV+ G F M ++ +EP V HY CM+DIL R G EA
Sbjct: 356 PNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFD 415
Query: 432 LIRSMPMEPDVFVWGALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGR 491
I M +E D + +LL C++H N+ +GEKVA+ L + ++ ++ L + YA GR
Sbjct: 416 FIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGR 475
Query: 492 FDDVKKTRNLMKERGIRKEVPGCSSVEVDGVVHEF 526
+ + R M++ GI KE PGCSS+EV+ +HEF
Sbjct: 476 WSYAAEVREKMEKGGIIKE-PGCSSIEVNNAIHEF 509
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 272/500 (54%), Gaps = 51/500 (10%)
Query: 31 LRNAIDECKNMREL---KEIHTQIIKSPCLQTNDHHSLITRLLFFCALSVSGSLSYATNV 87
L I C + +L KEIH ++++S S + + C G L A V
Sbjct: 210 LTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKC-----GCLEMAKEV 264
Query: 88 FSHIKRSDLYTYNIMIRANACKSSETNDTHSGKCLKLYKQMLCTGISPDCLTFPFLLKEC 147
F I+R ++ ++N MI + K S C++L+++M GI P T +L C
Sbjct: 265 FEQIQRKNVVSWNSMIAGYSLKGD------SKSCIELFRRMDEEGIRPTLTTLSSILMAC 318
Query: 148 TKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEMSNRDVVSWN 207
++ ++ +G ++G +++ V D+FV +S+I L+ CG + SA
Sbjct: 319 SRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE--------------- 363
Query: 208 AMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQEMQSSSVEE 267
++F+ M K N+ SWN +I+G+V+ G EAL +F +M+ + V
Sbjct: 364 ----------------NVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGV-- 405
Query: 268 MVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMYGKCGCVERA 327
KPD IT SVL AC+ L ++ GK +H ++ S L+ + V+ AL+DMY KCG V+ A
Sbjct: 406 --KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEA 463
Query: 328 YGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFVGLLSACAHS 387
+F ++P++D ++WT+MI+ + +G EA F +M+ +P+ VTF+ +LSAC+H+
Sbjct: 464 LHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHA 523
Query: 388 GLVEKGRWCFVMMRHVYLVEPHVYHYACMIDILSRAGLFSEAERLIRSMP-MEPDVFVWG 446
GLV++G + F M Y +P V HY+C+ID+L R G EA +++ P + DV +
Sbjct: 524 GLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLS 583
Query: 447 ALLGGCQMHGNVELGEKVAQYLIDLDPLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKERG 506
L C +H ++LGE++ + LI+ DP + + Y+ L +MYA ++D+V+K R +KE G
Sbjct: 584 TLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELG 643
Query: 507 IRKEVPGCSSVEVDGVVHEF 526
++K PGCS +EV +H F
Sbjct: 644 LKKN-PGCSWIEVGKRIHPF 662
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 153/526 (29%), Positives = 255/526 (48%), Gaps = 99/526 (18%)
Query: 25 ESTKLI--LRNAIDECKNMRELKEIHTQIIKSPCLQTNDH--HSLITRLLFFCALSVSGS 80
++TKL+ L+ ID K +++ K IH +I+ S LQ N SLI L F C L S
Sbjct: 2 DTTKLLSLLKTCIDS-KYLKQGKLIHQKIV-SLGLQNNITLCKSLIN-LYFSCHLFQSAK 58
Query: 81 LSYATNVFSHIKRS-DLYTYNIMIRANACKSSETNDTHSGKCLKLYKQML-CTGISPDCL 138
L VF I+ D+ +N ++ A C T + + L+++ ++L + PD
Sbjct: 59 L-----VFQTIENPLDITLWNGLMAA--C----TKNFIFIEGLEVFHRLLHFPYLKPDAF 107
Query: 139 TFPFLLKECTKRLDGLVGASVYGQVVKFGVCDDVFVQNSVISLFMACGFVTSARMLFDEM 198
T+P +LK C+ G V+ V+K G DV V +S + ++ C +F++
Sbjct: 108 TYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCN-------VFED- 159
Query: 199 SNRDVVSWNAMIIGYLRSGDLDVALDLFRRMKKRNIFSWNSIITGFVQGGRAREALELFQ 258
A+ LF M +R++ SWN++I+ + Q G+ +ALELF+
Sbjct: 160 -----------------------AIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFE 196
Query: 259 EMQSSSVEEMVKPDKITIASVLSACAYLGAIDHGKWVHGYLRRSGLDCDVVIGTALVDMY 318
EM+ S KPD +T+ +V+S+CA L ++ GK +H L RSG D + +ALVDMY
Sbjct: 197 EMKVSGF----KPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMY 252
Query: 319 GKCGCVERAYGVFKEMPKKDTLAWTAMISVFALNGYGKEAFDTFREMEAEGVRPNHVTFV 378
GKCGC+E A VF+++ +K+ ++W +MI+ ++L G K + FR M+ EG+RP T
Sbjct: 253 GKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLS 312
Query: 379 GLLSACAHSGLVEKGRWCFVMMRHVYL----VEPHVYHYACMIDILSRAGLFSEAERLIR 434
+L AC+ S ++ G++ H Y+ VE ++ + +ID+ + G AE + +
Sbjct: 313 SILMACSRSVNLQLGKFI-----HGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQ 367
Query: 435 SMP----------------------------------MEPDVFVWGALLGGCQMHGNVEL 460
+MP ++PD + ++L C +E
Sbjct: 368 NMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEK 427
Query: 461 GEKVAQYLIDLD-PLNHAFYVNLCDMYAKAGRFDDVKKTRNLMKER 505
G+++ ++I+ +N L DMYAK G D+ N + ER
Sbjct: 428 GKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPER 473
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,485,098,471
Number of Sequences: 23463169
Number of extensions: 342467012
Number of successful extensions: 916513
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7627
Number of HSP's successfully gapped in prelim test: 4133
Number of HSP's that attempted gapping in prelim test: 742970
Number of HSP's gapped (non-prelim): 53600
length of query: 569
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 421
effective length of database: 8,886,646,355
effective search space: 3741278115455
effective search space used: 3741278115455
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)