Query 038895
Match_columns 206
No_of_seqs 159 out of 1541
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 06:43:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 1.5E-49 5E-54 322.8 19.2 189 5-194 31-222 (223)
2 2w2e_A AQY1, aquaporin, aquapo 100.0 8.3E-49 2.8E-53 327.4 20.6 197 6-204 78-276 (279)
3 3iyz_A Aquaporin-4; water tran 100.0 2.4E-48 8.2E-53 329.7 19.5 189 6-195 80-271 (340)
4 1j4n_A Aquaporin 1; membrane p 100.0 1.4E-48 4.7E-53 325.4 16.7 190 7-197 45-237 (271)
5 2zz9_A Aquaporin-4; water tran 100.0 5.7E-48 2E-52 324.6 19.3 187 7-194 42-231 (301)
6 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 1.1E-47 3.7E-52 318.9 20.2 188 10-198 40-231 (266)
7 2b6o_A Aquaporin-0, lens fiber 100.0 1.9E-47 6.5E-52 317.3 21.2 188 8-196 36-226 (263)
8 2o9g_A Aquaporin Z; integral m 100.0 2.4E-47 8.2E-52 312.0 18.6 186 6-194 32-231 (234)
9 3cn5_A Aquaporin; membrane pro 100.0 7.8E-48 2.7E-52 324.4 14.3 189 6-195 90-289 (304)
10 3llq_A Aquaporin Z 2; aquapori 100.0 1.3E-46 4.3E-51 310.2 17.9 184 7-193 58-253 (256)
11 2f2b_A Aquaporin AQPM; protein 100.0 7.8E-46 2.7E-50 305.3 19.5 183 10-194 52-245 (246)
12 1ldf_A Glycerol uptake facilit 100.0 5.9E-46 2E-50 311.2 18.9 187 11-198 39-260 (281)
13 3c02_A Aquaglyceroporin; membr 100.0 1.6E-46 5.5E-51 311.2 9.8 188 10-198 40-247 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.6 3.4E-15 1.2E-19 123.5 8.7 102 94-196 7-111 (263)
15 3d9s_A Aquaporin-5, AQP-5; aqu 99.5 3.1E-14 1E-18 117.9 6.6 102 94-195 9-112 (266)
16 3llq_A Aquaporin Z 2; aquapori 99.5 6.7E-14 2.3E-18 115.1 8.2 100 95-194 28-132 (256)
17 2zz9_A Aquaporin-4; water tran 99.5 1.3E-13 4.4E-18 115.8 9.3 102 94-195 10-117 (301)
18 2o9g_A Aquaporin Z; integral m 99.5 1E-13 3.5E-18 112.8 7.5 100 96-195 4-108 (234)
19 3c02_A Aquaglyceroporin; membr 99.5 6.5E-14 2.2E-18 115.6 6.3 102 95-197 8-114 (258)
20 3gd8_A Aquaporin-4; proton exc 99.4 1.5E-13 5.2E-18 111.1 7.2 101 95-195 2-108 (223)
21 3cn5_A Aquaporin; membrane pro 99.4 1.2E-13 4.1E-18 116.1 6.7 102 95-196 59-167 (304)
22 3iyz_A Aquaporin-4; water tran 99.4 1.3E-13 4.4E-18 117.0 6.8 102 95-196 50-157 (340)
23 1ldf_A Glycerol uptake facilit 99.4 2.2E-13 7.5E-18 113.7 7.1 101 95-195 6-110 (281)
24 1j4n_A Aquaporin 1; membrane p 99.4 2.5E-13 8.4E-18 112.8 7.3 101 95-195 9-120 (271)
25 2f2b_A Aquaporin AQPM; protein 99.4 5.2E-13 1.8E-17 109.4 8.6 101 95-195 3-124 (246)
26 2w2e_A AQY1, aquaporin, aquapo 99.4 9.8E-13 3.4E-17 109.5 9.2 102 95-196 43-155 (279)
27 3tds_E Formate/nitrite transpo 85.6 13 0.00044 30.1 12.5 181 11-205 62-268 (268)
28 3s2u_A UDP-N-acetylglucosamine 60.6 2.2 7.4E-05 35.7 0.5 18 35-52 12-29 (365)
29 3kcu_A Probable formate transp 35.0 1.8E+02 0.0061 23.5 13.7 102 13-117 68-182 (285)
30 4fc4_A Nitrite transporter NIR 22.8 2.9E+02 0.0098 21.9 10.4 99 13-116 58-170 (261)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-49 Score=322.85 Aligned_cols=189 Identities=41% Similarity=0.723 Sum_probs=169.2
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Q 038895 5 DAALDPAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGL- 83 (206)
Q Consensus 5 ~~~~~~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~- 83 (206)
+++.++.+++.++++||+++++.+++++++||||+|||||+++++.||++|+|++.|+++|++|+++|+.+++.++++.
T Consensus 31 ~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~ 110 (223)
T 3gd8_A 31 TEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV 110 (223)
T ss_dssp TTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 4456678899999999999999999999999999999999999999999999999999999999999999999987642
Q ss_pred --CCcccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHH
Q 038895 84 --SIPTHAVGAGLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGP 161 (206)
Q Consensus 84 --~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~ 161 (206)
....+++.++.+..++++.|+++|++|+++++.. .|+|+...+...|+.+|+.+.......+++||++|||||||+|
T Consensus 111 ~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~-~~~~~~~~~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP 189 (223)
T 3gd8_A 111 VGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFAS-CDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGP 189 (223)
T ss_dssp HTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-TCTTCSCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred ccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHH-hccccCCccCCccHHHHHHHHHHHHhccCCccccccHHHHHHH
Confidence 2344566677889999999999999999999984 6666544356789999999887777777889999999999999
Q ss_pred HHhhcCCCceeecchhhhHHHHHHHHHHHHHhc
Q 038895 162 AVVSGDFSQIWIYWVGPLIGGGLAGLVYGDIFI 194 (206)
Q Consensus 162 ~~~~~~~~~~~vy~i~p~~Ga~~a~~l~~~l~~ 194 (206)
|++.++|+++|+||++|++|+++++++|++++.
T Consensus 190 ~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 190 AVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp HHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999874
No 2
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=8.3e-49 Score=327.44 Aligned_cols=197 Identities=32% Similarity=0.510 Sum_probs=169.8
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 038895 6 AALDPAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGLSI 85 (206)
Q Consensus 6 ~~~~~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~ 85 (206)
++.++.+++.++++||+++++.+|+++++||||+|||||+++++.|+++|++++.|+++|++||++|+.+++.++++...
T Consensus 78 ~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~ 157 (279)
T 2w2e_A 78 GGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA 157 (279)
T ss_dssp GCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCC
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccce
Confidence 34455679999999999999999999999999999999999999999999999999999999999999999999876543
Q ss_pred cccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhh
Q 038895 86 PTHAVGAGLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVS 165 (206)
Q Consensus 86 ~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~ 165 (206)
....+.++.+..++++.|+++||+|+++++....+++ + .+.+.|+.||+.+.++.++.+++||++|||||||||+++.
T Consensus 158 ~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~-~-~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~ 235 (279)
T 2w2e_A 158 FANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKH-R-ATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAA 235 (279)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCS-T-TGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHH
T ss_pred eeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCC-C-CcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHh
Confidence 3333444678899999999999999999998544433 2 2468999999999999999999999999999999999999
Q ss_pred cCC-CceeecchhhhHHHHHHHHHHHHHhcCCCC-CCCCCC
Q 038895 166 GDF-SQIWIYWVGPLIGGGLAGLVYGDIFIGSYT-PASTED 204 (206)
Q Consensus 166 ~~~-~~~~vy~i~p~~Ga~~a~~l~~~l~~~~~~-~~~~~~ 204 (206)
+.| .++|+||++|++|+++|+++|+++...+++ .+++||
T Consensus 236 ~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~~~p~~d 276 (279)
T 2w2e_A 236 RSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQTTNPGQD 276 (279)
T ss_dssp TCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCSCC---
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCCcCCCCCC
Confidence 775 589999999999999999999999874444 445665
No 3
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-48 Score=329.74 Aligned_cols=189 Identities=41% Similarity=0.726 Sum_probs=169.3
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Q 038895 6 AALDPAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGLS- 84 (206)
Q Consensus 6 ~~~~~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~- 84 (206)
++..+.+++.++++||+++++.+|+++++||||+|||||+++++.|+++|++++.|++||++||++|+.+++.++++..
T Consensus 80 ~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~ 159 (340)
T 3iyz_A 80 ENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVV 159 (340)
T ss_pred CCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhc
Confidence 4456678999999999999999999999999999999999999999999999999999999999999999999876542
Q ss_pred --CcccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHH
Q 038895 85 --IPTHAVGAGLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPA 162 (206)
Q Consensus 85 --~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~ 162 (206)
...+.+.++.+..++++.|+++||+|+++++.. .|+++.......|+.||+.+.......+++||++|||||||||+
T Consensus 160 ~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~-~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPa 238 (340)
T 3iyz_A 160 GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPA 238 (340)
T ss_pred CceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHh-hcCccCCcccchhhHHHHHHHHHHHhccCCccccccHHHHHHHH
Confidence 334455667889999999999999999999984 66555433457899999999888888889999999999999999
Q ss_pred HhhcCCCceeecchhhhHHHHHHHHHHHHHhcC
Q 038895 163 VVSGDFSQIWIYWVGPLIGGGLAGLVYGDIFIG 195 (206)
Q Consensus 163 ~~~~~~~~~~vy~i~p~~Ga~~a~~l~~~l~~~ 195 (206)
++.++|.++|+||++|++|+++|+++|++++.+
T Consensus 239 l~~~~w~~~WVywvgPiiGailaallY~~l~~p 271 (340)
T 3iyz_A 239 VIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP 271 (340)
T ss_pred HHccCCCcEeehhHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999863
No 4
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.4e-48 Score=325.38 Aligned_cols=190 Identities=43% Similarity=0.687 Sum_probs=168.3
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC---
Q 038895 7 ALDPAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGL--- 83 (206)
Q Consensus 7 ~~~~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--- 83 (206)
++...+++.++++||+++++.+|+++++||||+|||||+++++.|+++|++++.|+++|++||++|+.+++.++++.
T Consensus 45 ~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~ 124 (271)
T 1j4n_A 45 TGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN 124 (271)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTC
T ss_pred cCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCccc
Confidence 34456799999999999999999999999999999999999999999999999999999999999999999987543
Q ss_pred CCcccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHH
Q 038895 84 SIPTHAVGAGLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 163 (206)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~ 163 (206)
..+.+++.++.+..++++.|+++|++|+++++.. .|+|+...+.+.|+.+|+.+....+..+++||+++||||||+|++
T Consensus 125 ~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal 203 (271)
T 1j4n_A 125 SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLAT-TDRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSV 203 (271)
T ss_dssp CTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHH-TCSSCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred ccccccCCCccchHHHHHHHHHHHHHHHHHHHhh-ccccCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHH
Confidence 2334455667778899999999999999999984 666554335689999999999888887889999999999999999
Q ss_pred hhcCCCceeecchhhhHHHHHHHHHHHHHhcCCC
Q 038895 164 VSGDFSQIWIYWVGPLIGGGLAGLVYGDIFIGSY 197 (206)
Q Consensus 164 ~~~~~~~~~vy~i~p~~Ga~~a~~l~~~l~~~~~ 197 (206)
+.++|+++|+||++|++|+++++++|++++.++.
T Consensus 204 ~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 204 ITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp HTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred HhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999987443
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=5.7e-48 Score=324.61 Aligned_cols=187 Identities=41% Similarity=0.737 Sum_probs=168.2
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCC--
Q 038895 7 ALDPAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGLS-- 84 (206)
Q Consensus 7 ~~~~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-- 84 (206)
+..+.+++.++++||+++++++++++++||||+|||||+++++.|+++|++++.|+++|++||++|+.+++.++++..
T Consensus 42 ~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~ 121 (301)
T 2zz9_A 42 NPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG 121 (301)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGG
T ss_pred CCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 445678999999999999999999999999999999999999999999999999999999999999999999886542
Q ss_pred -CcccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHH
Q 038895 85 -IPTHAVGAGLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 163 (206)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~ 163 (206)
...+.+.++.+..++++.|+++||+|+++++.. .|+++.......|+.+|+.+.......+++||++|||||||||++
T Consensus 122 ~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~-~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal 200 (301)
T 2zz9_A 122 GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAV 200 (301)
T ss_dssp TSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-SCSSSSCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred ceeeecCCcccchHHHHHHHHHHHHHHHHHHHHh-cCCCCCCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHH
Confidence 234455567789999999999999999999984 665554335688999999998888888889999999999999999
Q ss_pred hhcCCCceeecchhhhHHHHHHHHHHHHHhc
Q 038895 164 VSGDFSQIWIYWVGPLIGGGLAGLVYGDIFI 194 (206)
Q Consensus 164 ~~~~~~~~~vy~i~p~~Ga~~a~~l~~~l~~ 194 (206)
+.++|.++|+||++|++|+++|+++|++++.
T Consensus 201 ~~~~w~~~WVy~vgPiiGailaa~ly~~l~~ 231 (301)
T 2zz9_A 201 IMGNWENHWIYWVGPIIGAVLAGALYEYVFC 231 (301)
T ss_dssp HHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HhCCCcceeeeeeHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999976
No 6
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-47 Score=318.87 Aligned_cols=188 Identities=34% Similarity=0.591 Sum_probs=168.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCc
Q 038895 10 PAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGL---SIP 86 (206)
Q Consensus 10 ~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~ 86 (206)
..+++.++++||+++++.+++++++||||+|||||+++++.|+++|++++.|+++|++||++|+.+++.+++++ ..+
T Consensus 40 ~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g 119 (266)
T 3d9s_A 40 LPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA 119 (266)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTT
T ss_pred CccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCcee
Confidence 36799999999999999999999999999999999999999999999999999999999999999999987542 233
Q ss_pred ccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhhc
Q 038895 87 THAVGAGLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG 166 (206)
Q Consensus 87 ~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~~ 166 (206)
.+.+.++.+..++++.|+++|++|+++++.. .|+++...+...|+.+|+.+....+..+++||++|||||||||+++.+
T Consensus 120 ~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~ 198 (266)
T 3d9s_A 120 VNALNNNTTQGQAMVVELILTFQLALCIFAS-TDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN 198 (266)
T ss_dssp CCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCTTCCSCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT
T ss_pred eccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccCCCccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC
Confidence 3445567788999999999999999999985 676554445689999999999999999999999999999999999999
Q ss_pred CCCc-eeecchhhhHHHHHHHHHHHHHhcCCCC
Q 038895 167 DFSQ-IWIYWVGPLIGGGLAGLVYGDIFIGSYT 198 (206)
Q Consensus 167 ~~~~-~~vy~i~p~~Ga~~a~~l~~~l~~~~~~ 198 (206)
+|++ +|+||++|++|+++|+++|++++.++.+
T Consensus 199 ~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~~ 231 (266)
T 3d9s_A 199 RFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSL 231 (266)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCSC
T ss_pred CcccCEeeeehHHHHHHHHHHHHHHHHhCCCch
Confidence 9998 9999999999999999999999774433
No 7
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=1.9e-47 Score=317.27 Aligned_cols=188 Identities=34% Similarity=0.630 Sum_probs=170.5
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC---C
Q 038895 8 LDPAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGL---S 84 (206)
Q Consensus 8 ~~~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~ 84 (206)
.+..+++.++++||+++++.+++++++||||+|||||+++++.|+++|++++.|+++|++||++|+.+++.++++. .
T Consensus 36 ~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~ 115 (263)
T 2b6o_A 36 PGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGN 115 (263)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSS
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 3456789999999999999999999999999999999999999999999999999999999999999999998753 2
Q ss_pred CcccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHh
Q 038895 85 IPTHAVGAGLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 164 (206)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~ 164 (206)
.+.+++.++.+..++++.|+++|++|+++++.. .|+++.......|+.||+.+.++.+..+++||++|||||||||+++
T Consensus 116 ~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~ 194 (263)
T 2b6o_A 116 LALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194 (263)
T ss_dssp CSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTSCSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHH
T ss_pred cccccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccCCCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHH
Confidence 344556677889999999999999999999985 7766544456899999999999999999999999999999999999
Q ss_pred hcCCCceeecchhhhHHHHHHHHHHHHHhcCC
Q 038895 165 SGDFSQIWIYWVGPLIGGGLAGLVYGDIFIGS 196 (206)
Q Consensus 165 ~~~~~~~~vy~i~p~~Ga~~a~~l~~~l~~~~ 196 (206)
.++|+++|+||++|++|+++|+++|++++.++
T Consensus 195 ~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 195 TRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp HTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred cCCccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999997644
No 8
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=2.4e-47 Score=311.98 Aligned_cols=186 Identities=34% Similarity=0.546 Sum_probs=164.1
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Q 038895 6 AALDPAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGLS- 84 (206)
Q Consensus 6 ~~~~~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~- 84 (206)
.++++.+++.++++||+++++.+|+++++||||+|||||+++++.||++|+|++.|+++|++||++|+.+++.++++..
T Consensus 32 ~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~ 111 (234)
T 2o9g_A 32 FPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTG 111 (234)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred CCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 3445678999999999999999999999999999999999999999999999999999999999999999999886431
Q ss_pred ----------CcccccC-CcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCcc
Q 038895 85 ----------IPTHAVG-AGLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSM 153 (206)
Q Consensus 85 ----------~~~~~~~-~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~l 153 (206)
....++. .+.+..++++.|+++|++|+++++.. .|+|+ .+.+.|+.+|+.+..+.+..+++||++|
T Consensus 112 ~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~~~--~~~~~pl~IGl~v~~~~~~~g~~TG~s~ 188 (234)
T 2o9g_A 112 FDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGA-TDKFA--PAGFAPIAIGLACTLIHLISIPVTNTSV 188 (234)
T ss_dssp CCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-TSTTS--CTTCHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred ccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHh-cCCCC--ccchHHHHHHHHHHHHHHHccCCCcccc
Confidence 1112222 25688999999999999999999984 67543 2468999999999999999999999999
Q ss_pred ChhhhHHHHHhhcC--CCceeecchhhhHHHHHHHHHHHHHhc
Q 038895 154 NPARSFGPAVVSGD--FSQIWIYWVGPLIGGGLAGLVYGDIFI 194 (206)
Q Consensus 154 NPAr~l~~~~~~~~--~~~~~vy~i~p~~Ga~~a~~l~~~l~~ 194 (206)
||||||+||++.++ |+++|+||++|++|+++++++|++++.
T Consensus 189 NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~ 231 (234)
T 2o9g_A 189 NPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 231 (234)
T ss_dssp CHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcC
Confidence 99999999999876 459999999999999999999999875
No 9
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=7.8e-48 Score=324.43 Aligned_cols=189 Identities=40% Similarity=0.671 Sum_probs=166.6
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC--
Q 038895 6 AALDPAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGL-- 83 (206)
Q Consensus 6 ~~~~~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-- 83 (206)
++..+.+++.++++||+++++++|+++++||||+|||||+++++.|+++|++++.|+++|++||++|+.+++.++++.
T Consensus 90 ~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~ 169 (304)
T 3cn5_A 90 VVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYN 169 (304)
T ss_dssp STTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred CCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 345677899999999999999999999999999999999999999999999999999999999999999999886532
Q ss_pred --CCcccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc----hhHHHHHHHHHHHHHHhcCCCCCccChhh
Q 038895 84 --SIPTHAVGAGLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGT----IAPIAIGFIVGANILAAGPFSGGSMNPAR 157 (206)
Q Consensus 84 --~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~----~~~~~ig~~v~~~~~~~~~~tG~~lNPAr 157 (206)
..+...+.++.+..++++.|+++||+|+++++. .+|+++...+. +.|+.||+.+.++.++.+++||+++||||
T Consensus 170 ~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~-~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR 248 (304)
T 3cn5_A 170 QFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPAR 248 (304)
T ss_dssp HTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred hccCcccccCCCccHHHHHHHHHHHHHHHHHHHhh-eecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHH
Confidence 112223455678899999999999999999996 57755433222 78999999999999999999999999999
Q ss_pred hHHHHHh---hcCCCceeecchhhhHHHHHHHHHHHHHhcC
Q 038895 158 SFGPAVV---SGDFSQIWIYWVGPLIGGGLAGLVYGDIFIG 195 (206)
Q Consensus 158 ~l~~~~~---~~~~~~~~vy~i~p~~Ga~~a~~l~~~l~~~ 195 (206)
||||+++ .++|+++|+||++|++|+++|+++|++++.+
T Consensus 249 ~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 249 SFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp HHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 9999999 5569999999999999999999999999764
No 10
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.3e-46 Score=310.15 Aligned_cols=184 Identities=30% Similarity=0.522 Sum_probs=162.0
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCC--
Q 038895 7 ALDPAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGLS-- 84 (206)
Q Consensus 7 ~~~~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-- 84 (206)
+..+.+++.++++||+++++.+++++++||||+|||||+++++.|+++|++++.|+++|++||++|+.+++.++++..
T Consensus 58 ~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~ 137 (256)
T 3llq_A 58 PELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGI 137 (256)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTC
T ss_pred CCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 445678999999999999999999999999999999999999999999999999999999999999999999874321
Q ss_pred -------CcccccCC-cchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChh
Q 038895 85 -------IPTHAVGA-GLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPA 156 (206)
Q Consensus 85 -------~~~~~~~~-~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPA 156 (206)
....++.| ..+..++++.|+++|++|+++++. ..|+|+. +.+.|+.+|+.+.++.+..+++||++||||
T Consensus 138 ~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~-~~d~~~~--~~~~pl~IGl~v~~i~~~~g~~TG~a~NPA 214 (256)
T 3llq_A 138 DLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILG-STHGRVP--AGFAPIAIGLALTLIHLISIPVTNTSVNPA 214 (256)
T ss_dssp CCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHH-HHSTTSC--TTCHHHHHHHHHHHHHHHHHHHHSCCSCHH
T ss_pred cccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHH-hcCCCCC--ccchhHHHHHHHHHHHHHhccccccccChH
Confidence 11122223 568889999999999999999997 4776542 468899999999999999999999999999
Q ss_pred hhHHHHHhhcC--CCceeecchhhhHHHHHHHHHHHHHh
Q 038895 157 RSFGPAVVSGD--FSQIWIYWVGPLIGGGLAGLVYGDIF 193 (206)
Q Consensus 157 r~l~~~~~~~~--~~~~~vy~i~p~~Ga~~a~~l~~~l~ 193 (206)
|||+||++.++ |+++|+||++|++|+++|+++|+++.
T Consensus 215 R~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 215 RSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 99999999865 56899999999999999999999884
No 11
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=7.8e-46 Score=305.30 Aligned_cols=183 Identities=32% Similarity=0.409 Sum_probs=160.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCc
Q 038895 10 PAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGL---SIP 86 (206)
Q Consensus 10 ~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~ 86 (206)
..+++.++++||+++++.+++++++||||+|||||+++++.||++|+|++.|+++|++|+++|+.+++.+++++ ...
T Consensus 52 ~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~NPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~ 131 (246)
T 2f2b_A 52 LGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGG 131 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTG
T ss_pred ccchhHHHHHHHHHHHHHhheecccccceeCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcce
Confidence 34578899999999999999999999999999999999999999999999999999999999999999998762 122
Q ss_pred ccc--cCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHh
Q 038895 87 THA--VGAGLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 164 (206)
Q Consensus 87 ~~~--~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~ 164 (206)
.+. +.++.+..++++.|+++|++|+++++....|+++. +...|+.+|+.+.+.+++.+++||+++||||||+|++.
T Consensus 132 ~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~ 209 (246)
T 2f2b_A 132 LGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAP--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLN 209 (246)
T ss_dssp GGCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSTTSC--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred eeeccCccccchHHHHHHHHHHHHHHHheeeEEecCCCCC--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHH
Confidence 233 33467889999999999999999999854454432 46789999999999999999999999999999999993
Q ss_pred --h----cCCCceeecchhhhHHHHHHHHHHHHHhc
Q 038895 165 --S----GDFSQIWIYWVGPLIGGGLAGLVYGDIFI 194 (206)
Q Consensus 165 --~----~~~~~~~vy~i~p~~Ga~~a~~l~~~l~~ 194 (206)
. ++|++.|+||++|++|+++++++|+++++
T Consensus 210 ~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 210 DMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 2 24888899999999999999999999865
No 12
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=5.9e-46 Score=311.20 Aligned_cols=187 Identities=28% Similarity=0.442 Sum_probs=160.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCC------
Q 038895 11 AGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGLS------ 84 (206)
Q Consensus 11 ~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~------ 84 (206)
.+.+.++++||+++++.+++++++||||+|||||+++++.|+++|++++.|+++|++||++|+.+++.++++..
T Consensus 39 ~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~ 118 (281)
T 1ldf_A 39 FGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQT 118 (281)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccc
Confidence 45666999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred -------------Cccccc--CCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CCchhHHHHHHHHHHHHHHhcCC
Q 038895 85 -------------IPTHAV--GAGLNAAEGLVMEIVITFALVYTVYATAADPKKGP-LGTIAPIAIGFIVGANILAAGPF 148 (206)
Q Consensus 85 -------------~~~~~~--~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~-~~~~~~~~ig~~v~~~~~~~~~~ 148 (206)
...+++ .++.+..++++.|+++||+|+++++.. .|+|+.. .+.+.|+.+|+.+.++.+..+++
T Consensus 119 ~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~ 197 (281)
T 1ldf_A 119 HHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILAL-TDDGNGVPRGPLAPLLIGLLIAVIGASMGPL 197 (281)
T ss_dssp TTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-HCTTSSSCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHH-hccCCCCcccchHHHHHHHHHHHHHHhcccc
Confidence 112333 345688999999999999999999985 6655543 24689999999999999999999
Q ss_pred CCCccChhhhHHHHHhhc-------CC------CceeecchhhhHHHHHHHHHHHHHhcCCCC
Q 038895 149 SGGSMNPARSFGPAVVSG-------DF------SQIWIYWVGPLIGGGLAGLVYGDIFIGSYT 198 (206)
Q Consensus 149 tG~~lNPAr~l~~~~~~~-------~~------~~~~vy~i~p~~Ga~~a~~l~~~l~~~~~~ 198 (206)
||++|||||||+||++.. .| .++|+||++|++|+++|+++|++++.++++
T Consensus 198 TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 198 TGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGGC-
T ss_pred cccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCccCC
Confidence 999999999999999861 12 279999999999999999999999874443
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=1.6e-46 Score=311.17 Aligned_cols=188 Identities=22% Similarity=0.361 Sum_probs=160.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC----CC
Q 038895 10 PAGLVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTSGL----SI 85 (206)
Q Consensus 10 ~~~~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~ 85 (206)
..+++.++++||+++++.+++++++||||+|||||+++++.||++|++++.|+++|++||++|+.+++.++++. ..
T Consensus 40 ~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~ 119 (258)
T 3c02_A 40 SGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKI 119 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCS
T ss_pred CccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccc
Confidence 45799999999999999999999999999999999999999999999999999999999999999999886531 00
Q ss_pred ----cccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCchh-HHHHHHHHHHHHHHhcCCCCCccChhhhH
Q 038895 86 ----PTHAVGAGLNAAEGLVMEIVITFALVYTVYATAADPKKG-PLGTIA-PIAIGFIVGANILAAGPFSGGSMNPARSF 159 (206)
Q Consensus 86 ----~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~-~~~~~~-~~~ig~~v~~~~~~~~~~tG~~lNPAr~l 159 (206)
.........+..++++.|+++|++|+++++.. .|+|++ ..+.+. |+.+|+.+..+.++.+++||++|||||||
T Consensus 120 ~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~-~d~~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~ 198 (258)
T 3c02_A 120 PQFAWETSRNPSISLTGAFFNELILTGILLLVILVV-VDENICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDL 198 (258)
T ss_dssp CTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_pred cccccccccCCCCchHHHHHHHHHHHHHHHHHHHHH-hCcccCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHH
Confidence 01111123345569999999999999999985 665543 234577 99999999999999999999999999999
Q ss_pred HHHHhhc------CC----CceeecchhhhHHHHHHHHHHHHHhcCCCC
Q 038895 160 GPAVVSG------DF----SQIWIYWVGPLIGGGLAGLVYGDIFIGSYT 198 (206)
Q Consensus 160 ~~~~~~~------~~----~~~~vy~i~p~~Ga~~a~~l~~~l~~~~~~ 198 (206)
+||++.. .| .++|+||++|++|+++++++|++++.++++
T Consensus 199 GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~~~ 247 (258)
T 3c02_A 199 GSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPLVD 247 (258)
T ss_dssp HHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 9999873 24 569999999999999999999999875443
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.58 E-value=3.4e-15 Score=123.51 Aligned_cols=102 Identities=22% Similarity=0.246 Sum_probs=86.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhhc-CCCc
Q 038895 94 LNAAEGLVMEIVITFALVYTVYATAADPKKGPLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG-DFSQ 170 (206)
Q Consensus 94 ~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~~-~~~~ 170 (206)
.+..+.++.|+++|++|+++.+.+....+... .. ..++.+|+.+.+.+++.+++||+|+|||++++..+.++ .|.+
T Consensus 7 ~~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~-~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~ 85 (263)
T 2b6o_A 7 ASFWRAIFAEFFATLFYVFFGLGASLRWAPGP-LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLR 85 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSS-CHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-cchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHH
Confidence 46788999999999999999987644322211 22 35788899999999999999999999999999999876 4889
Q ss_pred eeecchhhhHHHHHHHHHHHHHhcCC
Q 038895 171 IWIYWVGPLIGGGLAGLVYGDIFIGS 196 (206)
Q Consensus 171 ~~vy~i~p~~Ga~~a~~l~~~l~~~~ 196 (206)
.|.|+++|++|+++|+.+++.++++.
T Consensus 86 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 86 AICYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 99999999999999999999998743
No 15
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.49 E-value=3.1e-14 Score=117.90 Aligned_cols=102 Identities=20% Similarity=0.242 Sum_probs=85.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhhcC-CCce
Q 038895 94 LNAAEGLVMEIVITFALVYTVYATAADPKKGPLG-TIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD-FSQI 171 (206)
Q Consensus 94 ~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~~~-~~~~ 171 (206)
.+..+.++.|+++|++|++..+.+.....+...+ ....+..|+.+.+.+++.+++||+|+|||++++..+.++. |.+.
T Consensus 9 ~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~ 88 (266)
T 3d9s_A 9 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRA 88 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHH
Confidence 3667899999999999999988765432222111 1357888999999999999999999999999999998764 8899
Q ss_pred eecchhhhHHHHHHHHHHHHHhcC
Q 038895 172 WIYWVGPLIGGGLAGLVYGDIFIG 195 (206)
Q Consensus 172 ~vy~i~p~~Ga~~a~~l~~~l~~~ 195 (206)
+.|+++|++|+++|+.+.+.++++
T Consensus 89 ~~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 89 FFYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999999999999999998763
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.48 E-value=6.7e-14 Score=115.06 Aligned_cols=100 Identities=26% Similarity=0.212 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc-CCC-CCCCCc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhhcC-CC
Q 038895 95 NAAEGLVMEIVITFALVYTVYATAA-DPK-KGPLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD-FS 169 (206)
Q Consensus 95 ~~~~~~~~E~~~T~~l~~~il~~~~-~~~-~~~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~~~-~~ 169 (206)
+..+.++.|+++|++|++..+.+.. .++ +..... ...+..|+.+.+.+++.+++||+++|||++++..+.++. |.
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 107 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPAS 107 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHH
Confidence 5678999999999999998776432 111 111112 356788999999999999999999999999999998764 99
Q ss_pred ceeecchhhhHHHHHHHHHHHHHhc
Q 038895 170 QIWIYWVGPLIGGGLAGLVYGDIFI 194 (206)
Q Consensus 170 ~~~vy~i~p~~Ga~~a~~l~~~l~~ 194 (206)
+.+.|+++|++|+++|+.+.+.+++
T Consensus 108 ~~~~YiiAQ~lGA~~ga~lv~~~~~ 132 (256)
T 3llq_A 108 SLVPYVIAQVAGAIVAAAALYVIAT 132 (256)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999998885
No 17
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.47 E-value=1.3e-13 Score=115.76 Aligned_cols=102 Identities=12% Similarity=0.133 Sum_probs=84.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCCc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhhcC-
Q 038895 94 LNAAEGLVMEIVITFALVYTVYATAADPKKG---PLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD- 167 (206)
Q Consensus 94 ~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~---~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~~~- 167 (206)
.+.++.++.|+++|++|++..+.+....... .... ...+..|+.+.+.+++.+++||+|+|||.+++..+.++.
T Consensus 10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 89 (301)
T 2zz9_A 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 89 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCC
Confidence 4678999999999999999988643321111 1112 357888999999999999999999999999999998764
Q ss_pred CCceeecchhhhHHHHHHHHHHHHHhcC
Q 038895 168 FSQIWIYWVGPLIGGGLAGLVYGDIFIG 195 (206)
Q Consensus 168 ~~~~~vy~i~p~~Ga~~a~~l~~~l~~~ 195 (206)
|.+...|+++|++|+++|+.+.+.++++
T Consensus 90 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 117 (301)
T 2zz9_A 90 IAKSVFYITAQCLGAIIGAGILYLVTPP 117 (301)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999988764
No 18
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.45 E-value=1e-13 Score=112.82 Aligned_cols=100 Identities=25% Similarity=0.181 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCC--CCCc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhhcC-CCc
Q 038895 96 AAEGLVMEIVITFALVYTVYATAADPKKG--PLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD-FSQ 170 (206)
Q Consensus 96 ~~~~~~~E~~~T~~l~~~il~~~~~~~~~--~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~~~-~~~ 170 (206)
..|.++.|+++|++|++..+.+...++.. .... ...+..|+.+.+.+++.+++||+|+|||++++..+.++. |.+
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 57889999999999999877543222211 1111 356888999999999999999999999999999998764 889
Q ss_pred eeecchhhhHHHHHHHHHHHHHhcC
Q 038895 171 IWIYWVGPLIGGGLAGLVYGDIFIG 195 (206)
Q Consensus 171 ~~vy~i~p~~Ga~~a~~l~~~l~~~ 195 (206)
...|+++|++|+++|+.+.+.++++
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~ 108 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASG 108 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999998874
No 19
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.45 E-value=6.5e-14 Score=115.58 Aligned_cols=102 Identities=22% Similarity=0.300 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhhc-CCC
Q 038895 95 NAAEGLVMEIVITFALVYTVYATAAD--PKKGPLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG-DFS 169 (206)
Q Consensus 95 ~~~~~~~~E~~~T~~l~~~il~~~~~--~~~~~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~~-~~~ 169 (206)
+..+.++.|+++|++|++..+.+... +.+.. .. ...+..|+.+.+.+++.+++||+|+|||++++..+.++ .|.
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~-~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 86 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLS-GDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLK 86 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSST-TCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC-ccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHH
Confidence 56788999999999999986543211 11111 22 35677889999999999999999999999999999876 499
Q ss_pred ceeecchhhhHHHHHHHHHHHHHhcCCC
Q 038895 170 QIWIYWVGPLIGGGLAGLVYGDIFIGSY 197 (206)
Q Consensus 170 ~~~vy~i~p~~Ga~~a~~l~~~l~~~~~ 197 (206)
+...|+++|++|+++|+.+.+.+++++.
T Consensus 87 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~ 114 (258)
T 3c02_A 87 KIPVYFFAQLLGAFVGTSTVYGLYHGFI 114 (258)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchhh
Confidence 9999999999999999999999987543
No 20
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.44 E-value=1.5e-13 Score=111.05 Aligned_cols=101 Identities=12% Similarity=0.150 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCC--CCC-CCCc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhhcC-C
Q 038895 95 NAAEGLVMEIVITFALVYTVYATAADP--KKG-PLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD-F 168 (206)
Q Consensus 95 ~~~~~~~~E~~~T~~l~~~il~~~~~~--~~~-~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~~~-~ 168 (206)
+.+|.++.|+++|++|++..+.+.... +.+ +... ...+..|+.+.+.+++.+++||+|+|||.+++..+.++. |
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 457899999999999999888754321 111 1112 356778999999999999999999999999999988764 8
Q ss_pred CceeecchhhhHHHHHHHHHHHHHhcC
Q 038895 169 SQIWIYWVGPLIGGGLAGLVYGDIFIG 195 (206)
Q Consensus 169 ~~~~vy~i~p~~Ga~~a~~l~~~l~~~ 195 (206)
.+...|+++|++|+++++.+.+.++++
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~ 108 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPP 108 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 899999999999999999998888764
No 21
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.43 E-value=1.2e-13 Score=116.14 Aligned_cols=102 Identities=18% Similarity=0.205 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc--C-CCC-CCCCc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhhcC-
Q 038895 95 NAAEGLVMEIVITFALVYTVYATAA--D-PKK-GPLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD- 167 (206)
Q Consensus 95 ~~~~~~~~E~~~T~~l~~~il~~~~--~-~~~-~~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~~~- 167 (206)
+.++.++.|+++|++|++..+.+.. . ++. ..... ...+..|+.+++.+++.+++||+++|||++++..+.++.
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 6678999999999999998765322 1 111 11112 356788899999999999999999999999999998764
Q ss_pred CCceeecchhhhHHHHHHHHHHHHHhcCC
Q 038895 168 FSQIWIYWVGPLIGGGLAGLVYGDIFIGS 196 (206)
Q Consensus 168 ~~~~~vy~i~p~~Ga~~a~~l~~~l~~~~ 196 (206)
|.+...|+++|++|+++|+.+.+.+++++
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 167 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKGP 167 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 88999999999999999999999988743
No 22
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.43 E-value=1.3e-13 Score=116.98 Aligned_cols=102 Identities=13% Similarity=0.150 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCC--CC-CCCC--chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhhcC-C
Q 038895 95 NAAEGLVMEIVITFALVYTVYATAADP--KK-GPLG--TIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD-F 168 (206)
Q Consensus 95 ~~~~~~~~E~~~T~~l~~~il~~~~~~--~~-~~~~--~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~~~-~ 168 (206)
+.++.++.||++|++|++..+.+.... +. .... ....+..|+.+.+.+++.+++||+++|||++++..+.++. |
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~ 129 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 129 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence 557899999999999999877653321 11 1111 2357788999999999999999999999999999988764 8
Q ss_pred CceeecchhhhHHHHHHHHHHHHHhcCC
Q 038895 169 SQIWIYWVGPLIGGGLAGLVYGDIFIGS 196 (206)
Q Consensus 169 ~~~~vy~i~p~~Ga~~a~~l~~~l~~~~ 196 (206)
.....|+++|++|+++|+.+.+.++++.
T Consensus 130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 130 AKSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 8999999999999999999988887643
No 23
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.42 E-value=2.2e-13 Score=113.69 Aligned_cols=101 Identities=15% Similarity=0.087 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHhhcC-CCc
Q 038895 95 NAAEGLVMEIVITFALVYTVYATAA---DPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD-FSQ 170 (206)
Q Consensus 95 ~~~~~~~~E~~~T~~l~~~il~~~~---~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~~~~-~~~ 170 (206)
+..+.++.|+++|++|++..+.+.. .++.........+..|+.+.+.+++.+++||+|+|||++++..+.++. |.+
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 85 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK 85 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHH
Confidence 5678899999999999997664321 111111112367888999999999999999999999999999998874 999
Q ss_pred eeecchhhhHHHHHHHHHHHHHhcC
Q 038895 171 IWIYWVGPLIGGGLAGLVYGDIFIG 195 (206)
Q Consensus 171 ~~vy~i~p~~Ga~~a~~l~~~l~~~ 195 (206)
...|+++|++|+++|+.+.+.++++
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~ 110 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYN 110 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999988864
No 24
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.42 E-value=2.5e-13 Score=112.81 Aligned_cols=101 Identities=17% Similarity=0.279 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcC-------CC-CCCCC--chhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHh
Q 038895 95 NAAEGLVMEIVITFALVYTVYATAAD-------PK-KGPLG--TIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 164 (206)
Q Consensus 95 ~~~~~~~~E~~~T~~l~~~il~~~~~-------~~-~~~~~--~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~ 164 (206)
+.++.++.|+++|++|++..+.+... ++ +.... ....+..|+.+.+.+++.+++||+|+|||++++..+.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 56789999999999999987764321 01 11111 2357888999999999999999999999999999998
Q ss_pred hcC-CCceeecchhhhHHHHHHHHHHHHHhcC
Q 038895 165 SGD-FSQIWIYWVGPLIGGGLAGLVYGDIFIG 195 (206)
Q Consensus 165 ~~~-~~~~~vy~i~p~~Ga~~a~~l~~~l~~~ 195 (206)
++. |.+...|+++|++|+++|+.+.+.++.+
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 764 8899999999999999999999988753
No 25
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.41 E-value=5.2e-13 Score=109.43 Aligned_cols=101 Identities=27% Similarity=0.355 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc-----CCCC--------CC--CCc-----hhHHHHHHHHHHHHHHhcCCCCCccC
Q 038895 95 NAAEGLVMEIVITFALVYTVYATAA-----DPKK--------GP--LGT-----IAPIAIGFIVGANILAAGPFSGGSMN 154 (206)
Q Consensus 95 ~~~~~~~~E~~~T~~l~~~il~~~~-----~~~~--------~~--~~~-----~~~~~ig~~v~~~~~~~~~~tG~~lN 154 (206)
+..|.++.|+++|++|++..+.+.. .+.. .. .+. ...+..|+.+.+.+++.+++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4678899999999999998664321 1100 00 001 16788899999999999999999999
Q ss_pred hhhhHHHHHhhcC-CCceeecchhhhHHHHHHHHHHHHHhcC
Q 038895 155 PARSFGPAVVSGD-FSQIWIYWVGPLIGGGLAGLVYGDIFIG 195 (206)
Q Consensus 155 PAr~l~~~~~~~~-~~~~~vy~i~p~~Ga~~a~~l~~~l~~~ 195 (206)
||.+++..+.++. |.+...|+++|++|+++|+.+.+.++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 124 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGI 124 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 9999999998874 9999999999999999999999999875
No 26
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.39 E-value=9.8e-13 Score=109.51 Aligned_cols=102 Identities=20% Similarity=0.244 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHh--cCCCC-----CCC-Cc--hhHHHHHHHHHHHHHHhcCCCCCccChhhhHHHHHh
Q 038895 95 NAAEGLVMEIVITFALVYTVYATA--ADPKK-----GPL-GT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 164 (206)
Q Consensus 95 ~~~~~~~~E~~~T~~l~~~il~~~--~~~~~-----~~~-~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~l~~~~~ 164 (206)
+.++.++.|+++|++|++..+... ...+. ... .. ...+..|+.+.+.+++.+++||+|+|||++++..+.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 567789999999999998866431 11111 110 11 356788999999999999999999999999999998
Q ss_pred hcC-CCceeecchhhhHHHHHHHHHHHHHhcCC
Q 038895 165 SGD-FSQIWIYWVGPLIGGGLAGLVYGDIFIGS 196 (206)
Q Consensus 165 ~~~-~~~~~vy~i~p~~Ga~~a~~l~~~l~~~~ 196 (206)
++. |.+...|+++|++|+++|+.+.+.++++.
T Consensus 123 g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~ 155 (279)
T 2w2e_A 123 RAIPPFRGILMAFTQIVAGMAAAGAASAMTPGE 155 (279)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 764 88999999999999999999999988644
No 27
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=85.62 E-value=13 Score=30.10 Aligned_cols=181 Identities=17% Similarity=0.187 Sum_probs=87.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHhcc-CcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhc--CCC-Cc
Q 038895 11 AGLVAVAVAHALALFVGVAIAANI-SGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTS--GLS-IP 86 (206)
Q Consensus 11 ~~~l~~~~~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~~-~~ 86 (206)
...+.-++.+.+++...+..=... +| |-.....-.+.||.++++.+--+.-=.+|=++|+.+.-++.. +.. .+
T Consensus 62 ~~~ll~g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~ 138 (268)
T 3tds_E 62 MTKIVMGLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKG 138 (268)
T ss_dssp THHHHHHHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCc
Confidence 344555666666666655543222 11 433232345789999999988887777777777765544321 110 00
Q ss_pred cc-----cc---CCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHhcCCCCCccC----
Q 038895 87 TH-----AV---GAGLNAAEGLVMEIVITFALVYTVYATAADPKKGPLGTIAPIAIGFIVGANILAAGPFSGGSMN---- 154 (206)
Q Consensus 87 ~~-----~~---~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lN---- 154 (206)
.. .. .-+.+..+.|+-=+++-++..+.+... ...|+.. -.-+.+-+.+.+.+...-.+ +..|
T Consensus 139 ~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~-~~~k~~~---gKi~~i~~pi~~Fv~~GfEH--~VANm~~~ 212 (268)
T 3tds_E 139 PVAEFFANTAASKASMPFTALFFRGILCNILVCVSVLCS-FRTNSDT---AKIIMIFLCLFAIITSGFEH--SVANMTIY 212 (268)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH-HSCSCHH---HHHHHHHHHHHHHHHHTCCC--HHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH-hhcCchh---hHHHHHHHHHHHHHHccchH--HHHHHHHH
Confidence 00 00 112355677777778888777777653 2222211 11222222222222221111 1112
Q ss_pred ---------hhhhHHHHHhhcCCCceeecchhhhHHH-HHHHHHHHHHhcCCCCCCCCCCC
Q 038895 155 ---------PARSFGPAVVSGDFSQIWIYWVGPLIGG-GLAGLVYGDIFIGSYTPASTEDY 205 (206)
Q Consensus 155 ---------PAr~l~~~~~~~~~~~~~vy~i~p~~Ga-~~a~~l~~~l~~~~~~~~~~~~~ 205 (206)
+..+++..+ .+...=.+|.++|+ ++-++.|.++++++++|..|..|
T Consensus 213 ~~~~~~~~~~~~t~~~~~-----~nlipvtlGNiiGG~~fvgl~y~~~~~~~~~~~~~~~~ 268 (268)
T 3tds_E 213 SVSLFSPTISTVTIGGAI-----YNLVAVTLGNIVGGALFMGLGTYILGKEKLNAAAENLY 268 (268)
T ss_dssp HHHHHSSSCCSCCHHHHH-----HHHHHHHHHHHHHHHTTHHHHHHHHHCCC---------
T ss_pred HHHHHhCCCCCCcHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccC
Confidence 112222111 12233448888888 46788999999888888877654
No 28
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=60.56 E-value=2.2 Score=35.70 Aligned_cols=18 Identities=28% Similarity=0.529 Sum_probs=15.5
Q ss_pred CcccccHHHHHHHHHhcC
Q 038895 35 SGGHLNPAVTLGLAVGGN 52 (206)
Q Consensus 35 SGah~NPavTla~~l~g~ 52 (206)
||||++||++++-.+..+
T Consensus 12 TgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 12 TGGHVFPALACAREFQAR 29 (365)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhC
Confidence 679999999999988653
No 29
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=35.00 E-value=1.8e+02 Score=23.48 Aligned_cols=102 Identities=18% Similarity=0.263 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCcccccHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHh--cC-----CC-
Q 038895 13 LVAVAVAHALALFVGVAIAANISGGHLNPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVT--SG-----LS- 84 (206)
Q Consensus 13 ~l~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~-----~~- 84 (206)
.+.-++.+.+++...+..=+..==+ |--.++ -.+.||.+|++.+--+.-=.+|=++|+.+.-++. .+ +.
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg--n~l~~~-a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS--TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT--THHHHH-HHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc--chHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchH
Confidence 4555677777777766655544212 423333 3568899998887666666666666665443331 11 10
Q ss_pred Cc-----ccccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 038895 85 IP-----THAVGAGLNAAEGLVMEIVITFALVYTVYAT 117 (206)
Q Consensus 85 ~~-----~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~ 117 (206)
.. ...-.-+.+..+.|+-=+++-++..+.+...
T Consensus 145 ~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 182 (285)
T 3kcu_A 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0001223466778888888888888877753
No 30
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=22.75 E-value=2.9e+02 Score=21.91 Aligned_cols=99 Identities=15% Similarity=0.191 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCcccc---cHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhc--CCC-Cc
Q 038895 13 LVAVAVAHALALFVGVAIAANISGGHL---NPAVTLGLAVGGNITILTGIFYWIAQCLGSIVACLLLQFVTS--GLS-IP 86 (206)
Q Consensus 13 ~l~~~~~~g~~~~~~i~~~~~iSGah~---NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~~-~~ 86 (206)
.+.-++.+.+++...+.. |+.+ |-.....-.+.||.+|++.+--+.-=.+|=++|+.+.-++.. +.. .+
T Consensus 58 ~ll~g~~F~vGl~lVvl~-----g~eLfTgn~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~ 132 (261)
T 4fc4_A 58 PLVMGATFGIALTLVIIA-----GSELFTGHTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLP 132 (261)
T ss_dssp HHHHHHHTTHHHHHHHHT-----CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSS
T ss_pred HHHHHHHHHHHHHHHHHc-----CCcccccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCc
Confidence 344455566665555443 3433 433332345578999999888887777777777665443321 110 00
Q ss_pred cc-----ccC---CcchHHHHHHHHHHHHHHHHHHHHH
Q 038895 87 TH-----AVG---AGLNAAEGLVMEIVITFALVYTVYA 116 (206)
Q Consensus 87 ~~-----~~~---~~~~~~~~~~~E~~~T~~l~~~il~ 116 (206)
.. ... -+.+..+.|+-=+++-++..+.+..
T Consensus 133 ~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~ 170 (261)
T 4fc4_A 133 VDTSIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWM 170 (261)
T ss_dssp CTTSHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 1124566677777777777776665
Done!