Query 038896
Match_columns 334
No_of_seqs 162 out of 2072
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 04:21:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038896.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038896hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 2E-38 4.3E-43 287.5 34.1 295 33-330 46-350 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 4.6E-38 9.9E-43 281.2 30.2 293 36-334 2-299 (302)
3 KOG1441 Glucose-6-phosphate/ph 100.0 6.6E-39 1.4E-43 279.5 16.1 300 32-334 13-313 (316)
4 PLN00411 nodulin MtN21 family 100.0 1.9E-30 4.1E-35 234.4 29.5 291 34-333 11-333 (358)
5 KOG1444 Nucleotide-sugar trans 100.0 7.3E-30 1.6E-34 217.7 24.5 294 35-333 11-305 (314)
6 KOG1443 Predicted integral mem 100.0 6.2E-30 1.3E-34 215.0 23.1 295 32-328 12-315 (349)
7 PF08449 UAA: UAA transporter 100.0 2.5E-28 5.4E-33 218.0 29.7 280 49-334 13-303 (303)
8 PRK11272 putative DMT superfam 100.0 1.4E-26 3.1E-31 205.8 31.6 271 44-333 16-290 (292)
9 PRK11689 aromatic amino acid e 100.0 3.6E-26 7.8E-31 203.4 29.0 269 34-330 6-289 (295)
10 KOG1442 GDP-fucose transporter 100.0 3.6E-29 7.8E-34 207.0 8.0 298 32-333 24-332 (347)
11 PF06027 DUF914: Eukaryotic pr 100.0 5.5E-26 1.2E-30 201.2 27.2 289 33-330 10-307 (334)
12 PRK11453 O-acetylserine/cystei 100.0 3.2E-25 6.9E-30 197.8 31.2 266 51-331 19-290 (299)
13 PRK10532 threonine and homoser 99.9 7.2E-25 1.6E-29 194.9 31.2 257 50-333 26-286 (293)
14 TIGR00950 2A78 Carboxylate/Ami 99.9 1.9E-25 4E-30 195.7 26.2 252 52-323 5-259 (260)
15 PRK15430 putative chlorampheni 99.9 7.4E-25 1.6E-29 195.1 28.1 260 52-328 24-285 (296)
16 COG5070 VRG4 Nucleotide-sugar 99.9 3.9E-24 8.4E-29 172.2 15.7 285 38-332 8-300 (309)
17 TIGR03340 phn_DUF6 phosphonate 99.9 1.5E-22 3.2E-27 179.1 24.0 269 46-325 11-280 (281)
18 TIGR00688 rarD rarD protein. T 99.9 2.3E-20 5E-25 163.0 24.7 236 49-303 15-255 (256)
19 COG0697 RhaT Permeases of the 99.9 1.3E-18 2.7E-23 154.7 31.5 262 52-331 23-290 (292)
20 COG5006 rhtA Threonine/homoser 99.9 3.1E-19 6.8E-24 146.9 24.2 252 54-331 30-285 (292)
21 KOG2765 Predicted membrane pro 99.9 2.9E-20 6.3E-25 161.1 18.0 227 101-329 157-391 (416)
22 KOG1581 UDP-galactose transpor 99.9 7.7E-19 1.7E-23 148.5 25.1 293 32-332 10-317 (327)
23 KOG4510 Permease of the drug/m 99.9 1.5E-22 3.3E-27 167.4 2.0 280 31-330 34-327 (346)
24 KOG1580 UDP-galactose transpor 99.8 5.4E-20 1.2E-24 149.6 12.4 255 64-326 50-311 (337)
25 KOG3912 Predicted integral mem 99.8 8.3E-18 1.8E-22 140.3 21.3 286 41-328 8-334 (372)
26 PF04142 Nuc_sug_transp: Nucle 99.8 2.5E-18 5.4E-23 147.5 17.8 215 99-319 13-244 (244)
27 TIGR00776 RhaT RhaT L-rhamnose 99.8 7.5E-17 1.6E-21 142.9 27.5 251 53-329 18-289 (290)
28 PF03151 TPT: Triose-phosphate 99.8 1E-17 2.2E-22 134.7 16.4 145 184-328 1-153 (153)
29 KOG1582 UDP-galactose transpor 99.8 3.2E-17 6.9E-22 136.2 18.4 290 33-330 40-334 (367)
30 COG2962 RarD Predicted permeas 99.8 9.6E-16 2.1E-20 129.8 27.4 266 46-329 17-284 (293)
31 KOG2234 Predicted UDP-galactos 99.8 1.8E-15 3.9E-20 131.8 26.1 279 46-332 25-326 (345)
32 KOG1583 UDP-N-acetylglucosamin 99.7 2.9E-17 6.2E-22 136.9 13.2 266 52-329 19-315 (330)
33 KOG2766 Predicted membrane pro 99.6 1.5E-15 3.3E-20 125.3 7.4 278 33-329 15-300 (336)
34 KOG4314 Predicted carbohydrate 99.5 2.1E-13 4.6E-18 108.5 7.8 222 99-330 49-278 (290)
35 TIGR00803 nst UDP-galactose tr 99.3 8.1E-12 1.8E-16 106.6 10.2 194 127-326 2-222 (222)
36 COG2510 Predicted membrane pro 99.3 2.6E-11 5.5E-16 89.9 10.2 127 46-175 13-139 (140)
37 PF00892 EamA: EamA-like trans 99.3 1.3E-11 2.9E-16 95.2 7.1 118 51-173 6-124 (126)
38 COG2510 Predicted membrane pro 99.2 1.3E-10 2.7E-15 86.3 8.8 135 184-327 4-138 (140)
39 PF00892 EamA: EamA-like trans 99.2 2.5E-10 5.5E-15 88.0 10.3 124 193-327 1-125 (126)
40 PF13536 EmrE: Multidrug resis 99.1 2.6E-10 5.6E-15 86.5 6.4 107 72-179 2-110 (113)
41 PF06800 Sugar_transport: Suga 99.0 6.5E-08 1.4E-12 83.1 18.9 239 67-325 12-268 (269)
42 PRK15430 putative chlorampheni 99.0 7.5E-08 1.6E-12 85.9 18.3 142 178-327 3-144 (296)
43 TIGR00688 rarD rarD protein. T 99.0 7.4E-08 1.6E-12 84.1 17.6 139 183-327 2-141 (256)
44 TIGR03340 phn_DUF6 phosphonate 98.8 1E-07 2.3E-12 84.3 14.7 132 185-328 3-135 (281)
45 TIGR00950 2A78 Carboxylate/Ami 98.8 1.3E-07 2.8E-12 82.6 14.6 118 49-170 141-259 (260)
46 PLN00411 nodulin MtN21 family 98.6 1.4E-06 3.1E-11 79.4 15.9 137 184-328 14-156 (358)
47 PF05653 Mg_trans_NIPA: Magnes 98.6 1.7E-06 3.8E-11 76.7 14.3 63 112-174 59-121 (300)
48 PRK15051 4-amino-4-deoxy-L-ara 98.5 1.9E-06 4.2E-11 64.7 9.7 64 111-174 45-108 (111)
49 PRK11272 putative DMT superfam 98.4 3.1E-06 6.8E-11 75.3 11.8 109 67-176 177-286 (292)
50 PRK10532 threonine and homoser 98.4 7.5E-06 1.6E-10 72.9 13.5 117 51-174 163-280 (293)
51 PRK11689 aromatic amino acid e 98.4 1.1E-05 2.3E-10 72.0 14.0 129 183-327 4-136 (295)
52 PF03151 TPT: Triose-phosphate 98.4 1.8E-05 3.8E-10 63.3 13.9 128 46-174 10-152 (153)
53 PRK02971 4-amino-4-deoxy-L-ara 98.4 2.3E-05 4.9E-10 60.4 13.8 124 183-334 2-128 (129)
54 COG2962 RarD Predicted permeas 98.3 3.2E-05 6.9E-10 66.4 15.6 142 181-330 5-146 (293)
55 PTZ00343 triose or hexose phos 98.3 3.5E-05 7.7E-10 70.3 16.2 138 181-327 47-185 (350)
56 PRK13499 rhamnose-proton sympo 98.3 0.00049 1.1E-08 61.9 22.8 225 99-328 69-341 (345)
57 PRK11453 O-acetylserine/cystei 98.2 3.6E-05 7.8E-10 68.8 13.8 125 51-175 158-287 (299)
58 TIGR00817 tpt Tpt phosphate/ph 98.2 1E-05 2.3E-10 72.3 10.3 126 49-175 158-293 (302)
59 PF13536 EmrE: Multidrug resis 98.2 9.8E-05 2.1E-09 55.8 13.8 72 259-331 37-109 (113)
60 TIGR00776 RhaT RhaT L-rhamnose 98.0 0.00016 3.5E-09 64.2 12.7 132 184-330 2-138 (290)
61 PRK15051 4-amino-4-deoxy-L-ara 97.8 0.00025 5.4E-09 53.2 9.6 56 272-327 53-108 (111)
62 PRK02971 4-amino-4-deoxy-L-ara 97.8 6.4E-05 1.4E-09 57.9 5.8 72 105-176 50-123 (129)
63 PF08449 UAA: UAA transporter 97.7 0.00086 1.9E-08 60.0 13.6 128 194-330 11-138 (303)
64 KOG2922 Uncharacterized conser 97.7 0.00032 6.9E-09 61.1 10.0 65 112-176 73-137 (335)
65 COG0697 RhaT Permeases of the 97.7 0.0018 3.8E-08 57.2 15.0 140 181-330 5-145 (292)
66 PF04657 DUF606: Protein of un 97.6 0.0021 4.5E-08 50.2 12.5 130 185-325 3-138 (138)
67 COG4975 GlcU Putative glucose 97.6 1.3E-05 2.8E-10 66.9 -0.4 243 67-330 28-287 (288)
68 PRK10452 multidrug efflux syst 97.5 0.00024 5.2E-09 53.7 5.2 70 106-175 33-103 (120)
69 PF06027 DUF914: Eukaryotic pr 97.5 0.005 1.1E-07 55.4 14.3 139 183-328 13-151 (334)
70 PRK09541 emrE multidrug efflux 97.3 0.00066 1.4E-08 50.7 5.7 68 108-175 35-103 (110)
71 COG5006 rhtA Threonine/homoser 97.3 0.0045 9.9E-08 52.3 10.9 117 49-171 161-278 (292)
72 PRK09541 emrE multidrug efflux 97.2 0.0098 2.1E-07 44.4 11.3 57 274-330 48-105 (110)
73 PRK11431 multidrug efflux syst 97.2 0.0015 3.2E-08 48.3 6.4 69 106-174 32-101 (105)
74 PRK10650 multidrug efflux syst 97.1 0.0016 3.5E-08 48.4 6.3 68 106-173 38-106 (109)
75 PF04142 Nuc_sug_transp: Nucle 97.1 0.0029 6.3E-08 54.6 8.6 75 256-330 17-91 (244)
76 PRK10650 multidrug efflux syst 97.1 0.026 5.6E-07 42.0 12.2 53 275-327 54-107 (109)
77 KOG2234 Predicted UDP-galactos 97.1 0.046 1E-06 48.7 15.7 143 186-328 18-164 (345)
78 PF06800 Sugar_transport: Suga 97.0 0.0062 1.3E-07 52.7 10.0 101 67-172 164-268 (269)
79 PRK10452 multidrug efflux syst 97.0 0.025 5.4E-07 42.9 11.8 57 274-330 48-105 (120)
80 COG2076 EmrE Membrane transpor 97.0 0.0016 3.5E-08 47.7 4.8 69 106-174 33-102 (106)
81 COG2076 EmrE Membrane transpor 96.9 0.03 6.5E-07 41.1 10.8 56 275-330 49-105 (106)
82 PF05653 Mg_trans_NIPA: Magnes 96.8 0.0094 2E-07 53.1 9.5 117 181-327 5-121 (300)
83 PRK11431 multidrug efflux syst 96.8 0.04 8.6E-07 40.7 11.1 56 274-329 47-103 (105)
84 PF00893 Multi_Drug_Res: Small 96.7 0.006 1.3E-07 44.2 6.4 58 109-166 35-93 (93)
85 PRK13499 rhamnose-proton sympo 96.6 0.061 1.3E-06 48.6 13.4 136 182-328 6-153 (345)
86 TIGR00803 nst UDP-galactose tr 96.6 0.05 1.1E-06 46.3 11.9 67 106-172 155-221 (222)
87 COG3238 Uncharacterized protei 96.5 0.11 2.5E-06 40.7 12.4 140 182-330 4-148 (150)
88 PF04657 DUF606: Protein of un 96.5 0.08 1.7E-06 41.4 11.6 117 52-172 17-138 (138)
89 KOG1581 UDP-galactose transpor 96.2 0.053 1.2E-06 47.2 10.1 137 35-172 171-310 (327)
90 PF10639 UPF0546: Uncharacteri 95.8 0.019 4.2E-07 42.8 4.9 71 102-173 41-112 (113)
91 KOG4510 Permease of the drug/m 95.7 0.0035 7.6E-08 53.3 0.7 133 183-329 38-170 (346)
92 PF00893 Multi_Drug_Res: Small 95.6 0.14 3.1E-06 36.9 8.6 47 273-319 46-93 (93)
93 KOG1441 Glucose-6-phosphate/ph 95.3 0.028 6.1E-07 50.1 5.0 140 34-174 161-306 (316)
94 COG3238 Uncharacterized protei 94.0 1.3 2.8E-05 34.9 10.7 118 52-172 21-143 (150)
95 KOG2765 Predicted membrane pro 93.7 0.11 2.4E-06 46.7 4.8 75 257-331 160-234 (416)
96 PF10639 UPF0546: Uncharacteri 93.4 0.85 1.8E-05 34.1 8.3 52 274-325 59-111 (113)
97 PF07857 DUF1632: CEO family ( 93.3 0.18 3.8E-06 43.6 5.4 129 184-330 1-136 (254)
98 KOG1444 Nucleotide-sugar trans 93.1 0.47 1E-05 41.8 7.6 135 39-174 160-299 (314)
99 PF06379 RhaT: L-rhamnose-prot 92.8 5.1 0.00011 36.0 13.7 140 182-329 6-154 (344)
100 COG5070 VRG4 Nucleotide-sugar 92.7 1.6 3.6E-05 36.5 9.8 101 67-167 185-288 (309)
101 COG4975 GlcU Putative glucose 87.9 0.16 3.4E-06 43.1 0.0 74 100-173 206-283 (288)
102 KOG1580 UDP-galactose transpor 87.8 0.48 1E-05 39.9 2.8 74 100-173 238-311 (337)
103 KOG2922 Uncharacterized conser 85.7 0.34 7.4E-06 42.7 0.9 118 180-327 18-135 (335)
104 KOG4314 Predicted carbohydrate 85.4 0.73 1.6E-05 37.7 2.6 61 268-328 65-125 (290)
105 KOG3912 Predicted integral mem 85.2 6.5 0.00014 34.3 8.2 64 264-327 94-157 (372)
106 PRK02237 hypothetical protein; 84.5 14 0.0003 27.2 9.4 46 284-329 61-106 (109)
107 PF06379 RhaT: L-rhamnose-prot 84.4 31 0.00067 31.2 17.8 229 99-328 69-340 (344)
108 PF02694 UPF0060: Uncharacteri 84.1 7.9 0.00017 28.4 7.1 46 284-329 59-104 (107)
109 KOG1442 GDP-fucose transporter 78.6 9.1 0.0002 33.3 6.8 108 65-172 213-324 (347)
110 KOG1583 UDP-N-acetylglucosamin 66.8 16 0.00035 31.9 5.6 139 32-174 160-313 (330)
111 PF04342 DUF486: Protein of un 66.8 49 0.0011 24.3 8.9 60 114-173 46-106 (108)
112 PF04342 DUF486: Protein of un 62.1 7 0.00015 28.6 2.2 29 297-325 77-105 (108)
113 COG4858 Uncharacterized membra 61.3 63 0.0014 26.5 7.6 101 39-149 103-204 (226)
114 KOG1582 UDP-galactose transpor 59.6 56 0.0012 28.6 7.5 114 68-181 221-338 (367)
115 PF07857 DUF1632: CEO family ( 59.4 1.1E+02 0.0025 26.5 9.6 100 67-174 27-133 (254)
116 KOG4831 Unnamed protein [Funct 58.5 12 0.00025 27.4 2.8 70 103-173 53-123 (125)
117 COG1742 Uncharacterized conser 58.3 69 0.0015 23.5 6.6 45 285-329 61-105 (109)
118 KOG2766 Predicted membrane pro 55.8 5.2 0.00011 34.4 0.8 57 270-326 92-148 (336)
119 COG3169 Uncharacterized protei 53.8 31 0.00067 24.9 4.2 31 297-327 84-114 (116)
120 PF05297 Herpes_LMP1: Herpesvi 53.0 4.5 9.8E-05 35.1 0.0 99 124-225 44-146 (381)
121 PRK02237 hypothetical protein; 51.1 98 0.0021 22.9 8.4 39 137-175 67-105 (109)
122 PF02694 UPF0060: Uncharacteri 49.8 15 0.00032 27.0 2.2 39 137-175 65-103 (107)
123 COG1742 Uncharacterized conser 46.2 30 0.00064 25.3 3.2 39 138-176 67-105 (109)
124 COG4657 RnfA Predicted NADH:ub 39.8 2E+02 0.0043 23.1 7.4 57 149-205 91-154 (193)
125 TIGR00905 2A0302 transporter, 38.0 3.6E+02 0.0078 25.6 11.4 22 311-332 417-438 (473)
126 PF08627 CRT-like: CRT-like; 37.7 1.1E+02 0.0023 23.4 5.2 53 32-85 53-105 (130)
127 KOG4831 Unnamed protein [Funct 32.1 81 0.0017 23.2 3.6 53 274-326 70-123 (125)
128 COG3169 Uncharacterized protei 31.3 2.1E+02 0.0045 20.8 9.2 29 145-173 85-113 (116)
129 PF09964 DUF2198: Uncharacteri 28.5 88 0.0019 21.3 3.1 54 151-207 16-69 (74)
130 PF07444 Ycf66_N: Ycf66 protei 27.8 64 0.0014 22.7 2.5 24 307-330 4-27 (84)
131 TIGR01167 LPXTG_anchor LPXTG-m 27.7 50 0.0011 18.3 1.7 15 307-321 9-23 (34)
132 PF07168 Ureide_permease: Urei 25.5 47 0.001 29.5 1.8 134 189-327 2-145 (336)
133 PF09930 DUF2162: Predicted tr 23.9 4.5E+02 0.0099 22.3 11.9 76 95-170 94-172 (224)
134 PF07123 PsbW: Photosystem II 23.4 98 0.0021 23.9 3.0 30 178-207 101-130 (138)
135 PF08693 SKG6: Transmembrane a 23.2 51 0.0011 19.5 1.1 19 314-332 21-39 (40)
136 TIGR00994 3a0901s05TIC20 chlor 21.8 5.4E+02 0.012 22.4 12.8 8 54-61 135-142 (267)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=2e-38 Score=287.53 Aligned_cols=295 Identities=23% Similarity=0.323 Sum_probs=252.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccC-chHHHHHHHHHHH
Q 038896 33 QTLFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVK-SRSQLAKIATLST 111 (334)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~ 111 (334)
..++...++..|+.+|+..++.||.++++ +|+|++++.+|++++.+++..+ ...+.+++++.. .+++++..++.|+
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~llp~gl 122 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLY-WATGFRKIPRIKSLKLFLKNFLPQGL 122 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999998 8899999999999998876653 223333333332 4568899999999
Q ss_pred HHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCCcchHHHHHHHHHH
Q 038896 112 VFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEPGFHLYGFIMCISA 191 (334)
Q Consensus 112 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~~~~~G~~~~l~a 191 (334)
++.......+.|++++++++++++++++|+++++++++++|||++++++.+++++++|+.+...+|.+++..|++++++|
T Consensus 123 ~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s 202 (350)
T PTZ00343 123 CHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLS 202 (350)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHH
Confidence 99777777889999999999999999999999999999999999999999999999999999988888898999999999
Q ss_pred HHHHHHHHHHHHHHhccCC---CCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHH-H---h--hcchhHHHHHHHHH
Q 038896 192 TAARAFKSVLQGILLSSEG---ERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIV-S---L--GRQHKFLWLLLLIN 262 (334)
Q Consensus 192 ~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~---~--~~~~~~~~~~~~~~ 262 (334)
++++++|+++.|+.+++++ ++.++.+...++.+.+.++++|.....|........ . . .......+..++.+
T Consensus 203 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s 282 (350)
T PTZ00343 203 NLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFS 282 (350)
T ss_pred HHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHH
Confidence 9999999999999987432 246788888888999999999988766653322111 0 0 11112345567778
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 263 STMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
++..++++.+.++++++++|.+.++.+++||++++++|++++||++|+.+++|.++++.|+++|++.|
T Consensus 283 ~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 283 GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 88999999999999999999999999999999999999999999999999999999999999999764
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=4.6e-38 Score=281.19 Aligned_cols=293 Identities=23% Similarity=0.330 Sum_probs=243.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHH
Q 038896 36 FILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCG 115 (334)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 115 (334)
+....+..|++.|++.+++||+++++ +++|+.+++.|+.++.+...+. +..+.+++++ .++++++..++.|++++.
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~g~~~~~ 77 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLS-WSSGLPKRLK-ISSALLKLLLPVAIVHTI 77 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHH-HHhCCCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999997 8899999999999998877663 2122223223 357889999999999999
Q ss_pred HhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCCcchHHHHHHHHHHHHHH
Q 038896 116 SVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEPGFHLYGFIMCISATAAR 195 (334)
Q Consensus 116 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~ 195 (334)
+..+.|.+++|+++++++++++++|+++.+++++++|||++++++.+++++++|+++...++.+.+..|+++++++++++
T Consensus 78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~ 157 (302)
T TIGR00817 78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITF 157 (302)
T ss_pred HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998887777777888999999999999
Q ss_pred HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHH--HHHh-h-cchhHHHHHHHHHHH-HHHHHH
Q 038896 196 AFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEV--IVSL-G-RQHKFLWLLLLINST-MAYSAN 270 (334)
Q Consensus 196 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~-~-~~~~~~~~~~~~~~~-~~~~~~ 270 (334)
+.|.++.||..+ +.+.|+.+++.|++..+.+.+.|.....|+..... +... . ......+...+..+. .....+
T Consensus 158 a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T TIGR00817 158 VSRNIFSKKAMT--IKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQ 235 (302)
T ss_pred HHHHHHHHHhhc--cCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Confidence 999999999865 34689999999999999999999887666433211 1110 0 011122322333333 344455
Q ss_pred HHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhhhcC
Q 038896 271 LLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKRRYR 334 (334)
Q Consensus 271 ~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~~~~ 334 (334)
...+.+++++||++.++.++++|++++++|++++||++|+.+++|.++++.|+.+|++.|.||+
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~ 299 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP 299 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence 6677899999999999999999999999999999999999999999999999999999887764
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-39 Score=279.55 Aligned_cols=300 Identities=43% Similarity=0.646 Sum_probs=268.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHH
Q 038896 32 KQTLFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLST 111 (334)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 111 (334)
++.+....+...|+.++++....||++++.++||+|++++.++..++.+.... .+..+..+.++..++..++..++.|+
T Consensus 13 ~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v-~~~l~~~~~~~~~~~~~~~~llpl~~ 91 (316)
T KOG1441|consen 13 KKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLV-IKVLKLVPPSKISSKLPLRTLLPLGL 91 (316)
T ss_pred chhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCCCccccccchHHHHHHHH
Confidence 46788889999999999999999999999888999999999988888888887 56677777666667899999999999
Q ss_pred HHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCCcchHHHHHHHHHH
Q 038896 112 VFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEPGFHLYGFIMCISA 191 (334)
Q Consensus 112 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~~~~~G~~~~l~a 191 (334)
.++++..+.|.+++++|+++++++|+++|+++.++++++.+|++++..+++++.++.|+.+.+..|.++|..|...++.+
T Consensus 92 ~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s 171 (316)
T KOG1441|consen 92 VFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMIS 171 (316)
T ss_pred HHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHH-HHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 038896 192 TAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLL-PAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSAN 270 (334)
Q Consensus 192 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (334)
.+..++++++.|+.+++++++.|+.+.++|+++.+.+.++ |+....|+... .......+....+..++.+ ++++++|
T Consensus 172 ~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s-v~~f~~N 249 (316)
T KOG1441|consen 172 NLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLILLLNS-VLAFLLN 249 (316)
T ss_pred HHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHHHHHH-HHHHHHH
Confidence 9999999999999997667899999999999999999999 87777666543 1111112222334444444 9999999
Q ss_pred HHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhhhcC
Q 038896 271 LLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKRRYR 334 (334)
Q Consensus 271 ~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~~~~ 334 (334)
.+.|++++++||++.++.+.+|.++.++.++++|+|+.|+.+.+|+++.+.|+.+|++.|.+++
T Consensus 250 ls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~ 313 (316)
T KOG1441|consen 250 LSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK 313 (316)
T ss_pred HHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999887653
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=1.9e-30 Score=234.43 Aligned_cols=291 Identities=17% Similarity=0.159 Sum_probs=223.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHH
Q 038896 34 TLFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVF 113 (334)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 113 (334)
..+....++...+...++..+.|..+++ |.+ |..+.++|+.++.+++.++...+++.++.+..+++++......|++.
T Consensus 11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g 88 (358)
T PLN00411 11 EAVFLTAMLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG 88 (358)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence 3445566677778888899999999976 777 99999999999999988865544332222222456677777778777
Q ss_pred HHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHH------hhcccchhhhhhhhhhhhheeeeec-CCC--------
Q 038896 114 CGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLM------TFKREAWVTYATLVPVVAGVVIASE-GEP-------- 178 (334)
Q Consensus 114 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~------~~e~~~~~~~~~v~l~~~G~~l~~~-~~~-------- 178 (334)
.+.+.+.+.|++|++++.++++.++.|+++.++++++ +|||.++++++|++++++|+.++.. ++.
T Consensus 89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~ 168 (358)
T PLN00411 89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSP 168 (358)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence 6677789999999999999999999999999999999 6999999999999999999977553 111
Q ss_pred ---------------cch-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCH-HHHHHHHHHHHHHHHHHHHHHhChhh
Q 038896 179 ---------------GFH-LYGFIMCISATAARAFKSVLQGILLSSEGERLNS-MNLLLYMSPIAVLVLLPAALIMEPKV 241 (334)
Q Consensus 179 ---------------~~~-~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (334)
..+ ..|+.+.++++++||+|++++|+..+ ++++ ...++++...+.+.+.+.....|...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~----~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~ 244 (358)
T PLN00411 169 PYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMS----EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNN 244 (358)
T ss_pred ccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH----HcCcHhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 112 45999999999999999999999876 3433 46667777777776666655554322
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHH
Q 038896 242 LEVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVL 321 (334)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~ 321 (334)
...+.. ..+...+ .+++.++........+++++++.+|.+++++.+++|++++++|++++||++++.+++|.++++.
T Consensus 245 ~~~~~~--~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~ 321 (358)
T PLN00411 245 PSVWII--HFDITLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITL 321 (358)
T ss_pred ccccee--ccchHHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 222111 1122222 2444444444445567889999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhc
Q 038896 322 GVAAYGEAKRRY 333 (334)
Q Consensus 322 G~~~~~~~~~~~ 333 (334)
|+++.++.+++|
T Consensus 322 Gv~l~~~~~~~~ 333 (358)
T PLN00411 322 GFYAVMWGKANE 333 (358)
T ss_pred HHHHHHhhhhhh
Confidence 999998876554
No 5
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=7.3e-30 Score=217.75 Aligned_cols=294 Identities=23% Similarity=0.299 Sum_probs=252.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHH
Q 038896 35 LFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFC 114 (334)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 114 (334)
...+...+.|..+|..+++.||+++++++||.-+++...|.+.+.+.+.. .+..|..+.+++ +++..|+++|.++++.
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~-lk~~~lv~~~~l-~~~~~kk~~P~~~lf~ 88 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLV-LKRLGLVNFRPL-DLRTAKKWFPVSLLFV 88 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH-HHHhceeecCCc-ChHHHHHHccHHHHHH
Confidence 44577788899999999999999999966665566666999999988887 444555555444 7888999999999999
Q ss_pred HHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCCcchHHHHHHHHHHHHH
Q 038896 115 GSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEPGFHLYGFIMCISATAA 194 (334)
Q Consensus 115 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~~~~~G~~~~l~a~~~ 194 (334)
++......+++|++++.++++++.+|+++++.+..++|.|+++..|.++....+|.......|.+++..|+.|++...+.
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~ 168 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLT 168 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Q 038896 195 RAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLLNF 274 (334)
Q Consensus 195 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (334)
.+.+.+..|+..+ ..+.+.+.+++|+++.+...+....+++++.+-.......+....++..+.++|+++++.+++.+
T Consensus 169 ~a~~~v~~kk~vd--~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~ 246 (314)
T KOG1444|consen 169 TAAFVVYVKKSVD--SANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSF 246 (314)
T ss_pred HHHHHHHHHHhhc--cccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999877 55778899999999999999988887776544111111224446678899999999999999999
Q ss_pred HHHhccchhHHHHHhhHHHHHHHHHHHH-HhCCccccchhhhHHHHHHHHHHhhhhhhhc
Q 038896 275 LVTKHTSALTLQVLGNAKGAVAVVISIL-LFRNPVTFIGIAGYTMTVLGVAAYGEAKRRY 333 (334)
Q Consensus 275 ~~~~~~~a~~~s~~~~l~~v~~~~~~~~-~~~e~~s~~~~~G~~lii~G~~~~~~~~~~~ 333 (334)
++.+.+|+++.++++ ++..+.+.++.+ ++|++.++...+|..+.+.|..+|++.+.|+
T Consensus 247 ~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~ 305 (314)
T KOG1444|consen 247 LCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK 305 (314)
T ss_pred HHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence 999999999999999 555555555555 4567899999999999999999999987554
No 6
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.97 E-value=6.2e-30 Score=215.00 Aligned_cols=295 Identities=20% Similarity=0.379 Sum_probs=260.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccC---CcccCchHHHHHHHH
Q 038896 32 KQTLFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVP---LQTVKSRSQLAKIAT 108 (334)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ 108 (334)
.+++..+.++..||++|++..+.+|..-.+ |++|++++.+|.++..+......+..+... +.+..+++..++..|
T Consensus 12 ~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aP 89 (349)
T KOG1443|consen 12 MNRVLTLALVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAP 89 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhh
Confidence 445677777899999999999999988776 899999999999999888877555443322 335668888999999
Q ss_pred HHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCCcchHHHHHHH
Q 038896 109 LSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEPGFHLYGFIMC 188 (334)
Q Consensus 109 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~~~~~G~~~~ 188 (334)
.++..+++.+++|++++|++.+.+++.|+.+++|+.+++.++.-||+++.-...+.++.+|+++.++.+.+++..|+.+.
T Consensus 90 talata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv 169 (349)
T KOG1443|consen 90 TALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLV 169 (349)
T ss_pred hhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHH---hhcc--hhHHHHHHHHH
Q 038896 189 ISATAARAFKSVLQGILLSSEG-ERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVS---LGRQ--HKFLWLLLLIN 262 (334)
Q Consensus 189 l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~ 262 (334)
.+++++.++++.+.|.++++.+ .+-+|...+++..+...+.++|....+|++....... .... .......+..+
T Consensus 170 ~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~ 249 (349)
T KOG1443|consen 170 LAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLG 249 (349)
T ss_pred HHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHH
Confidence 9999999999999999999766 5679999999999999999999999999876542221 1111 23445678888
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhh
Q 038896 263 STMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGE 328 (334)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~ 328 (334)
|..+++...+.+..+.+++..+.++.+..|.+...+++....+|.++..+|+|..++..|+..|..
T Consensus 250 g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 250 GLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999943
No 7
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.97 E-value=2.5e-28 Score=218.04 Aligned_cols=280 Identities=20% Similarity=0.315 Sum_probs=231.8
Q ss_pred HHHHHHHHHHhhhCCC-CchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhcccc
Q 038896 49 IGVLLLNKYLLSNYGF-RFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRYL 127 (334)
Q Consensus 49 ~~~~~~~K~~~~~~~~-~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~ 127 (334)
....+.++.+.++... ++|..+++.|++...+.........+ .+.+++..++.+++.++++.++..+.|.|++|+
T Consensus 13 ~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i 88 (303)
T PF08449_consen 13 CSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK----FPKSRKIPLKKYAILSFLFFLASVLSNAALKYI 88 (303)
T ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc----ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3344566666665333 37999999999999988887444333 122256778889999999999999999999999
Q ss_pred chhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCC----cc------hHHHHHHHHHHHHHHHH
Q 038896 128 PVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEP----GF------HLYGFIMCISATAARAF 197 (334)
Q Consensus 128 ~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~----~~------~~~G~~~~l~a~~~~a~ 197 (334)
|.+..+++|++.|+++++++.+++|||++++++.+++++.+|+++...+|. +. ...|+++.+++.++.|.
T Consensus 89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~ 168 (303)
T PF08449_consen 89 SYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAF 168 (303)
T ss_pred ChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998875442 11 12399999999999999
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 038896 198 KSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLVT 277 (334)
Q Consensus 198 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (334)
..+++|+..+ +.+.++.++++|.+.++.+..++.....+.....+........+..+..++..++.++..+...+..+
T Consensus 169 ~~~~qe~~~~--~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~ 246 (303)
T PF08449_consen 169 TGVYQEKLFK--KYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLI 246 (303)
T ss_pred HHHHHHHHHH--HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988 55779999999999999999888777632111222222222344467777788888888778888899
Q ss_pred hccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhhhcC
Q 038896 278 KHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKRRYR 334 (334)
Q Consensus 278 ~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~~~~ 334 (334)
++.||++.++..+++.+++++++++++|+++++.+|+|.++++.|..+|++.|+|++
T Consensus 247 ~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 247 KKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 999999999999999999999999999999999999999999999999999998875
No 8
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.96 E-value=1.4e-26 Score=205.83 Aligned_cols=271 Identities=18% Similarity=0.138 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHH-HHHhhhhhh
Q 038896 44 WYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVF-CGSVVGGNI 122 (334)
Q Consensus 44 ~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~ 122 (334)
-.+.+.......|...++ .+ |..++++|+.++.+++.++....+ .+ .+++++++.....|++. .....+.+.
T Consensus 16 ~~~iWg~~~~~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~-~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~ 88 (292)
T PRK11272 16 LYIIWGSTYLVIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRG-HP---LPTLRQWLNAALIGLLLLAVGNGMVTV 88 (292)
T ss_pred HHHHHhhHHHHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhC-CC---CCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334456678988885 77 999999999999998887544322 11 12456677777777665 567778888
Q ss_pred hc-cccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecC-CCcchHHHHHHHHHHHHHHHHHHH
Q 038896 123 SL-RYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEG-EPGFHLYGFIMCISATAARAFKSV 200 (334)
Q Consensus 123 al-~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~-~~~~~~~G~~~~l~a~~~~a~~~v 200 (334)
+. ++++++.++++.++.|+++.+++.+ +|||++++++++++++++|+.++..+ +.+.+..|+.++++++++||.+.+
T Consensus 89 ~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~ 167 (292)
T PRK11272 89 AEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSV 167 (292)
T ss_pred HHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHH
Confidence 98 9999999999999999999999985 69999999999999999999877543 344566799999999999999999
Q ss_pred HHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHH-HHHHHHHHHHhc
Q 038896 201 LQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAY-SANLLNFLVTKH 279 (334)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 279 (334)
..|+..+ + ++.....++...+.+.+.+.....+.+.. ...+...+..+...++++. .....+++++++
T Consensus 168 ~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~ 236 (292)
T PRK11272 168 WSSRLPL----P-VGMMAGAAEMLAAGVVLLIASLLSGERLT------ALPTLSGFLALGYLAVFGSIIAISAYMYLLRN 236 (292)
T ss_pred HHHhcCC----C-cchHHHHHHHHHHHHHHHHHHHHcCCccc------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999632 1 34456678888888877776654432210 0011222444444455443 334457888999
Q ss_pred cchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhhhc
Q 038896 280 TSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKRRY 333 (334)
Q Consensus 280 ~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~~~ 333 (334)
.++.+.+++.+++|+++.+++++++||++++.+++|.++++.|+++.++.++|+
T Consensus 237 ~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~~ 290 (292)
T PRK11272 237 VRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYLF 290 (292)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999988876653
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.96 E-value=3.6e-26 Score=203.43 Aligned_cols=269 Identities=17% Similarity=0.135 Sum_probs=193.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHH
Q 038896 34 TLFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVF 113 (334)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 113 (334)
.+..+..+..| .+.....|..+++ +| |..+..+|+..+.+++.++. + +++ . ++++++..+..++.+
T Consensus 6 ~l~~l~a~~~W----g~~~~~~k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~---~-~~~--~-~~~~~~~~~~~~l~~ 71 (295)
T PRK11689 6 TLIGLIAILLW----STMVGLIRGVSES--LG-PVGGAAMIYSVSGLLLLLTV---G-FPR--L-RQFPKRYLLAGGLLF 71 (295)
T ss_pred hHHHHHHHHHH----HHHHHHHHHHHcc--CC-hHHHHHHHHHHHHHHHHHHc---c-ccc--c-ccccHHHHHHHhHHH
Confidence 34444444444 3335588998887 77 99999999999998887632 1 111 1 122334445555555
Q ss_pred HHHhhhhhhhcc----ccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCCc----------
Q 038896 114 CGSVVGGNISLR----YLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEPG---------- 179 (334)
Q Consensus 114 ~~~~~~~~~al~----~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~---------- 179 (334)
+....+.+.+++ +.+++.+.++.++.|+++.+++++++|||++++++++++++++|++++..++.+
T Consensus 72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~ 151 (295)
T PRK11689 72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNI 151 (295)
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhcc
Confidence 667777777765 467888899999999999999999999999999999999999999888654321
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHH
Q 038896 180 -FHLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLL 258 (334)
Q Consensus 180 -~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (334)
.+..|++++++++++||.+.++.||..+ +.++..... ..+.+.+.+.....+.+ . ...+...+..
T Consensus 152 ~~~~~G~~~~l~aa~~~A~~~v~~k~~~~----~~~~~~~~~---~~~~~~l~~~~~~~~~~-~------~~~~~~~~~~ 217 (295)
T PRK11689 152 ASNPLSYGLAFIGAFIWAAYCNVTRKYAR----GKNGITLFF---ILTALALWIKYFLSPQP-A------MVFSLPAIIK 217 (295)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHhhccC----CCCchhHHH---HHHHHHHHHHHHHhcCc-c------ccCCHHHHHH
Confidence 2346999999999999999999999754 345554422 22333333322222211 1 0111222434
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 259 LLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
++..++.+......+++++++.+|...+...+++|+++++++++++||++++.+++|.++++.|+.+.....
T Consensus 218 l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 218 LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 445555555556668899999999999999999999999999999999999999999999999987765543
No 10
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=3.6e-29 Score=207.00 Aligned_cols=298 Identities=20% Similarity=0.274 Sum_probs=257.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhh--CCCCchHHHHHHHHHHHHHHHHHHHHHHhccC------CcccCchHHH
Q 038896 32 KQTLFILSLVLLWYSSNIGVLLLNKYLLSN--YGFRFPIFLTMCHMSACAILSYVSIVFLKIVP------LQTVKSRSQL 103 (334)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~--~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~ 103 (334)
++..........++..++++++.||++++. ...+.|.++++.|+++...++..+.+..++.+ ..+ .+-+..
T Consensus 24 ~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~-ldl~t~ 102 (347)
T KOG1442|consen 24 ANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQ-LDLATA 102 (347)
T ss_pred HhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCccc-ccHHHH
Confidence 335566677778899999999999999996 44678999999999999988887554333221 122 367889
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCC---Ccc
Q 038896 104 AKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGE---PGF 180 (334)
Q Consensus 104 ~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~---~~~ 180 (334)
+..+|.++.+.++..+.|++++|.+++++++-++++.+|+.+++++++|||.+.....+..+++.|--+-+-.| ...
T Consensus 103 r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~l 182 (347)
T KOG1442|consen 103 RQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTL 182 (347)
T ss_pred HhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887666 556
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHH
Q 038896 181 HLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLL 260 (334)
Q Consensus 181 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (334)
++.|.++++.++++-|+..++.|+... +.+-..+.+++|++..+.++.+|...+.+.. ..-+..++.++..+|..+.
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~--~v~~~iw~lt~ynnv~a~lLflpll~lnge~-~~v~~~~~l~a~~Fw~~mt 259 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLP--PVGDCIWRLTAYNNVNALLLFLPLLILNGEF-QAVVGFPHLPAIKFWILMT 259 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecc--cccCeehhhHHHHHHHHHHHHHHHHHHcchH-HHHcCcccchHHHHHHHHH
Confidence 789999999999999999999998865 4455778999999999999999987765332 1112223445677899999
Q ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhhhc
Q 038896 261 INSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKRRY 333 (334)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~~~ 333 (334)
++|++++.+++.+.+-+|.+||+++.+.+..|...++++++.+++|..+...|-|-.+++.|...|++.|++|
T Consensus 260 LsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~e 332 (347)
T KOG1442|consen 260 LSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHE 332 (347)
T ss_pred HHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988665
No 11
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.95 E-value=5.5e-26 Score=201.18 Aligned_cols=289 Identities=16% Similarity=0.186 Sum_probs=226.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHH
Q 038896 33 QTLFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTV 112 (334)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 112 (334)
+.+..+.+-=....+..++...+..+-++ |.+.|.+.+++..+.-.++..+...+++..++.....+..+++.+..+++
T Consensus 10 ~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~ 88 (334)
T PF06027_consen 10 RFWIVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALL 88 (334)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHH
Confidence 33444443333334444555666766666 88899999999887777666554333322221111234567777778999
Q ss_pred HHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCC---------cchHH
Q 038896 113 FCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEP---------GFHLY 183 (334)
Q Consensus 113 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~---------~~~~~ 183 (334)
...++.+.+.|++|++++.++++..++.+++++++++++|||+++.+++|+++.++|++++...|. +....
T Consensus 89 Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~ 168 (334)
T PF06027_consen 89 DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPIL 168 (334)
T ss_pred HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccch
Confidence 999999999999999999999999999999999999999999999999999999999987765441 23468
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHH
Q 038896 184 GFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINS 263 (334)
Q Consensus 184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (334)
|++++++++++||.++++.|+..+ +.+..+...+.++.+.++..+.....|....+.. .++......++..+
T Consensus 169 GDll~l~~a~lya~~nV~~E~~v~----~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~----~w~~~~~~~~v~~~ 240 (334)
T PF06027_consen 169 GDLLALLGAILYAVSNVLEEKLVK----KAPRVEFLGMLGLFGFIISGIQLAILERSGIESI----HWTSQVIGLLVGYA 240 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcc----cCCHHHHHHHHHHHHHHHHHHHHHheehhhhhcc----CCChhhHHHHHHHH
Confidence 999999999999999999999987 4578899999999999999998888887655432 22333344555555
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 264 TMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
+..+..+...-..++..||+..++.....++.+++++++++|+++++..++|.+++++|..+|+..+
T Consensus 241 ~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 241 LCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 5555555555667999999999999999999999999999999999999999999999999998643
No 12
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.95 E-value=3.2e-25 Score=197.83 Aligned_cols=266 Identities=17% Similarity=0.177 Sum_probs=193.4
Q ss_pred HHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHH-HHHhhhhhhhccc-cc
Q 038896 51 VLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVF-CGSVVGGNISLRY-LP 128 (334)
Q Consensus 51 ~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~al~~-~~ 128 (334)
.....|..+++ ++ |..+..+|+.++.+.+.+.. + +++ ..++.....+++. .....+.+.++++ .|
T Consensus 19 ~~~~~k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~---~-~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 85 (299)
T PRK11453 19 NFVVIKVGLHN--MP-PLMLAGLRFMLVAFPAIFFV---A-RPK------VPLNLLLGYGLTISFGQFAFLFCAINFGMP 85 (299)
T ss_pred hHHHHHHHHhc--CC-HHHHHHHHHHHHHHHHHHHh---c-CCC------CchHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34567988876 77 99999999998776655422 1 111 1123344445543 3455567788887 68
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCC---CcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 038896 129 VSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGE---PGFHLYGFIMCISATAARAFKSVLQGIL 205 (334)
Q Consensus 129 ~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~v~~~~~ 205 (334)
++.+.++.++.|+++.+++++++|||++++++++++++++|+.++..++ .+.+..|+.++++++++|+.+.++.|+.
T Consensus 86 a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~ 165 (299)
T PRK11453 86 AGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKI 165 (299)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998776432 2334579999999999999999999997
Q ss_pred hccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH-HHHHHhccchhH
Q 038896 206 LSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLL-NFLVTKHTSALT 284 (334)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~ 284 (334)
.++ +...+......++...+.+...+.....|++.... ......+...+..+++.++++....+. ++..+++.+|.+
T Consensus 166 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~ 243 (299)
T PRK11453 166 MSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMI-HSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWR 243 (299)
T ss_pred hcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh-hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 542 11233344455555555544444433344322110 111122334466666666666655444 677899999999
Q ss_pred HHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhh
Q 038896 285 LQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKR 331 (334)
Q Consensus 285 ~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~ 331 (334)
.+...+++|+++.+++++++||++++.+++|.++++.|+.+..+.++
T Consensus 244 ~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 244 VAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 99999999999999999999999999999999999999998776554
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.95 E-value=7.2e-25 Score=194.90 Aligned_cols=257 Identities=16% Similarity=0.110 Sum_probs=193.3
Q ss_pred HHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhccccch
Q 038896 50 GVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPV 129 (334)
Q Consensus 50 ~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~ 129 (334)
....+.|+.+++ +| |..+.++|++++.+++.++.+ +.++ +. ++++++..+..|++.+..+.+.+++++++|+
T Consensus 26 ~~~~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~--~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~ 97 (293)
T PRK10532 26 SGASLAKSLFPL--VG-APGVTALRLALGTLILIAIFK--PWRL--RF-AKEQRLPLLFYGVSLGGMNYLFYLSIQTVPL 97 (293)
T ss_pred hhHHHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHh--HHhc--cC-CHHHHHHHHHHHHHHHHHHHHHHHHHhcccH
Confidence 334578999997 77 999999999999988877432 1111 11 3566777778888888888899999999999
Q ss_pred hHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecC--C-CcchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 038896 130 SFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEG--E-PGFHLYGFIMCISATAARAFKSVLQGILL 206 (334)
Q Consensus 130 ~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~--~-~~~~~~G~~~~l~a~~~~a~~~v~~~~~~ 206 (334)
+.++++..+.|+++.+++ +||+.+. .++.+++.|+.++... + .+.+..|++++++++++||.+.+..|+..
T Consensus 98 ~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~ 171 (293)
T PRK10532 98 GIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAG 171 (293)
T ss_pred HHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999886 3565544 4556778898766532 2 23456799999999999999999999985
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHH-HHHHHHhccchhHH
Q 038896 207 SSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANL-LNFLVTKHTSALTL 285 (334)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~ 285 (334)
+ +.++... .++...+++.+.|.....+... ..+...+..++..++++....+ .+++++++.+|...
T Consensus 172 ~----~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~a 238 (293)
T PRK10532 172 A----EHGPATV-AIGSLIAALIFVPIGALQAGEA--------LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTF 238 (293)
T ss_pred c----cCCchHH-HHHHHHHHHHHHHHHHHccCcc--------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHH
Confidence 4 3456555 4566777777777665433210 0111223333344555444333 56888999999999
Q ss_pred HHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhhhc
Q 038896 286 QVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKRRY 333 (334)
Q Consensus 286 s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~~~ 333 (334)
++..+++|+++.+++++++||++++.+++|.++++.|++.+++..+||
T Consensus 239 s~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~ 286 (293)
T PRK10532 239 GTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRRE 286 (293)
T ss_pred HHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999998765544
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.95 E-value=1.9e-25 Score=195.73 Aligned_cols=252 Identities=17% Similarity=0.191 Sum_probs=197.5
Q ss_pred HHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHH-HHHHHhhhhhhhccccchh
Q 038896 52 LLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLST-VFCGSVVGGNISLRYLPVS 130 (334)
Q Consensus 52 ~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~al~~~~~~ 130 (334)
....|..+++ +.| |..+.+.|++.+.+++.+..+ .+ + +++++++.+..+. ..+++..+.+.|++++|++
T Consensus 5 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~-~~--~-----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~ 74 (260)
T TIGR00950 5 GVVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLR-RR--P-----PLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVG 74 (260)
T ss_pred HHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHH-hc--c-----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 4578998876 345 899999999998888776433 22 1 2344445555554 4688999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 038896 131 FNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGE-PGFHLYGFIMCISATAARAFKSVLQGILLSSE 209 (334)
Q Consensus 131 ~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~ 209 (334)
.++++.++.|+++.+++.+++|||++++++.++.+++.|+.++..++ .+.+..|+.++++++++++.+.++.|+..+
T Consensus 75 ~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~-- 152 (260)
T TIGR00950 75 EAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVK-- 152 (260)
T ss_pred hhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhh--
Confidence 99999999999999999999999999999999999999998776443 455678999999999999999999999865
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHH-HHHHHHHHHHHhccchhHHHHH
Q 038896 210 GERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMA-YSANLLNFLVTKHTSALTLQVL 288 (334)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~s~~ 288 (334)
+.+.++.....+....+.+++.+.....+.... .+...+..++..++++ ......+++++++.++.+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~ 224 (260)
T TIGR00950 153 KEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ--------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASIL 224 (260)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC--------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 223334555556788888888877665433211 1122243444444444 3445557889999999999999
Q ss_pred hhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHH
Q 038896 289 GNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGV 323 (334)
Q Consensus 289 ~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~ 323 (334)
.+++|+++.+++++++||++++.+++|.++++.|+
T Consensus 225 ~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 225 ALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999986
No 15
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.95 E-value=7.4e-25 Score=195.12 Aligned_cols=260 Identities=9% Similarity=0.079 Sum_probs=186.0
Q ss_pred HHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCC--cccCchHHHHHHHHHHHHHHHHhhhhhhhccccch
Q 038896 52 LLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPL--QTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPV 129 (334)
Q Consensus 52 ~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~ 129 (334)
....|.. .+ .+ |..+.++|+.++.+++.++....+..+. ++..+++.+......++..+.++.+.++|++++|+
T Consensus 24 ~~~~k~~-~~--~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 99 (296)
T PRK15430 24 PAYFKLI-YY--VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHM 99 (296)
T ss_pred HHHHHHh-cC--CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 3455875 43 77 9999999999998877664433221111 01112333333445556678889999999999999
Q ss_pred hHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 038896 130 SFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEPGFHLYGFIMCISATAARAFKSVLQGILLSSE 209 (334)
Q Consensus 130 ~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~ 209 (334)
+.++++.++.|+++.+++++++|||++++++.++++++.|++++..++.+. ..++++++++||.|.+..|+..+
T Consensus 100 ~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~-- 173 (296)
T PRK15430 100 LEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAV-- 173 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999998876433222 24688899999999999998643
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHh
Q 038896 210 GERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLVTKHTSALTLQVLG 289 (334)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~ 289 (334)
+...+......+..+.+.+...+.. +.. .... .......+..++..++.+...+.+++.++++.+|...+.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~---~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~ 246 (296)
T PRK15430 174 EAQTGMLIETMWLLPVAAIYLFAIA---DSS-TSHM---GQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQ 246 (296)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHc---cCC-cccc---cCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 2223344445555555544432211 111 0000 00111112344444545555566788899999999999999
Q ss_pred hHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhh
Q 038896 290 NAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGE 328 (334)
Q Consensus 290 ~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~ 328 (334)
+++|+++.++|++++||++++.+++|+++++.|+.+...
T Consensus 247 ~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 247 YIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999888877653
No 16
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.92 E-value=3.9e-24 Score=172.15 Aligned_cols=285 Identities=19% Similarity=0.266 Sum_probs=244.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHh
Q 038896 38 LSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSV 117 (334)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 117 (334)
+...+.|+..|+.+++.||++++..||+-.+.+.+.|.+++.+.+.. .+..|..+. +....+.+.|.+++...+.
T Consensus 8 ~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~i-Lk~l~~~~f----R~t~aK~WfpiSfLLv~MI 82 (309)
T COG5070 8 LTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLI-LKFLRLVEF----RLTKAKKWFPISFLLVVMI 82 (309)
T ss_pred chHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHH-HHHHhHhhe----ehhhhhhhcCHHHHHHHHH
Confidence 34567788999999999999999999998899999999988887776 443443332 2455788889999999999
Q ss_pred hhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCCc--------chHHHHHHHH
Q 038896 118 VGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEPG--------FHLYGFIMCI 189 (334)
Q Consensus 118 ~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~--------~~~~G~~~~l 189 (334)
....-+++|.+++.++++++++.+.++..+..++|.|++.....+.++.+..-+...++|.+ .| .|++|+.
T Consensus 83 yt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~ 161 (309)
T COG5070 83 YTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMF 161 (309)
T ss_pred HhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEe
Confidence 99999999999999999999999999999999999999999999999999999999888763 34 5999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 038896 190 SATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSA 269 (334)
Q Consensus 190 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (334)
..++..+.+-...|+..+ -.+......++|+++.+..++..+.+.+|.+........ ........++.+|+++++.
T Consensus 162 ~NclssaafVL~mrkri~--ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~ann--l~~d~l~am~ISgl~svgi 237 (309)
T COG5070 162 TNCLSSAAFVLIMRKRIK--LTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANN--LSVDSLMAMFISGLCSVGI 237 (309)
T ss_pred hhhHhHHHHHHHHHHhhc--ccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcC--CChHHHHHHHHHHHHHhhh
Confidence 999999999999998765 334566789999999999999999998876654432221 2233467889999999999
Q ss_pred HHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhhh
Q 038896 270 NLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKRR 332 (334)
Q Consensus 270 ~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~~ 332 (334)
.++..|+++.+++++.|+++.++.....+.|.++|||+.+...+..+.+-..+..+|...|.+
T Consensus 238 Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~ 300 (309)
T COG5070 238 SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK 300 (309)
T ss_pred hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876644
No 17
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.91 E-value=1.5e-22 Score=179.13 Aligned_cols=269 Identities=12% Similarity=0.046 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhcc
Q 038896 46 SSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLR 125 (334)
Q Consensus 46 ~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~ 125 (334)
++....+..+|...++ -+ +. ...++....+++.+........+..+..+++.+...+..++....+..+.+.+++
T Consensus 11 ~~~a~~~~~~k~~~~~--~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 85 (281)
T TIGR03340 11 LMHAGWNLMAKSHADK--EP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYH 85 (281)
T ss_pred HHHHHHHHHHhhcCCc--hh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334445677865554 12 32 3666666666666544332112211222455566666677777889999999999
Q ss_pred ccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCC-CcchHHHHHHHHHHHHHHHHHHHHHHH
Q 038896 126 YLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGE-PGFHLYGFIMCISATAARAFKSVLQGI 204 (334)
Q Consensus 126 ~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~v~~~~ 204 (334)
+.|++.++.+.+++|+++.+++++++|||+++++++|+.+++.|++++..++ .+.+..|+.++++++++++.|.+..|+
T Consensus 86 ~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~ 165 (281)
T TIGR03340 86 HADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKA 165 (281)
T ss_pred cCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccc
Confidence 9999999999999999999999999999999999999999999998776433 234567888999999999999999887
Q ss_pred HhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Q 038896 205 LLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLVTKHTSALT 284 (334)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 284 (334)
..++.+...+......+......+.+.+.....+.... . ......+..+..+++.+...+..++.++++.++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~ 239 (281)
T TIGR03340 166 AALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSM---F---PYARQILPSATLGGLMIGGAYALVLWAMTRLPVAT 239 (281)
T ss_pred cccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccch---h---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceE
Confidence 53311111111222222222221111111111111100 0 01112234445555555555666888999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHH
Q 038896 285 LQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAA 325 (334)
Q Consensus 285 ~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~ 325 (334)
.+...+++|+++.+++++++||+++..+++|.++++.|+.+
T Consensus 240 ~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 240 VVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred EEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 99999999999999999999999999999999999999875
No 18
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.88 E-value=2.3e-20 Score=163.02 Aligned_cols=236 Identities=9% Similarity=0.009 Sum_probs=161.2
Q ss_pred HHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccC----C-cccCchHHHHHHHHHHHHHHHHhhhhhhh
Q 038896 49 IGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVP----L-QTVKSRSQLAKIATLSTVFCGSVVGGNIS 123 (334)
Q Consensus 49 ~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~----~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~a 123 (334)
.....+.|. ..+ .+ |..++++|++++.+++.++....++++ + ++..+++.+......+++.+.+..+.+.|
T Consensus 15 g~~~~~~k~-~~~--~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a 90 (256)
T TIGR00688 15 GYMYYYSKL-LKP--LP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWA 90 (256)
T ss_pred HHHHHHHHH-hcc--CC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 334557897 444 77 999999999999888766443332211 1 11112233445667777788899999999
Q ss_pred ccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 038896 124 LRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEPGFHLYGFIMCISATAARAFKSVLQG 203 (334)
Q Consensus 124 l~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~ 203 (334)
++++++++++++.++.|+++++++++++|||++++++++++++++|++++..++.+.+ .+++++++++|.|.+..|
T Consensus 91 ~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~ 166 (256)
T TIGR00688 91 VNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRK 166 (256)
T ss_pred HHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999987754322222 367889999999999999
Q ss_pred HHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 038896 204 ILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLVTKHTSAL 283 (334)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 283 (334)
+..+ + +..+.... .........+.....+.... . .......|..++..++.+...+...+.++++.+|.
T Consensus 167 ~~~~--~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~ 235 (256)
T TIGR00688 167 ALKN--T---DLAGFCLE-TLSLMPVAIYYLLQTDFATV-Q----QTNPFPIWLLLVLAGLITGTPLLAFVIAANRLPLN 235 (256)
T ss_pred hcCC--C---CcchHHHH-HHHHHHHHHHHHHHhccCcc-c----ccCchhHHHHHHHHHHHHHHHHHHHHHHHHcCChH
Confidence 9633 1 22222111 11111111111111111100 0 00011124444555556556667788999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHH
Q 038896 284 TLQVLGNAKGAVAVVISILL 303 (334)
Q Consensus 284 ~~s~~~~l~~v~~~~~~~~~ 303 (334)
..++..+++|+++.+++.+.
T Consensus 236 ~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 236 LLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999764
No 19
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.86 E-value=1.3e-18 Score=154.65 Aligned_cols=262 Identities=22% Similarity=0.252 Sum_probs=188.0
Q ss_pred HHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhH
Q 038896 52 LLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSF 131 (334)
Q Consensus 52 ~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~ 131 (334)
....|...+. ...+......|...+.+....... .+...+.+. .+..++..+..++.......+.+.++++++++.
T Consensus 23 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (292)
T COG0697 23 FIALKLAVES--LDPFLFAAALRFLIAALLLLPLLL-LEPRGLRPA-LRPWLLLLLLALLGLALPFLLLFLALKYTSASV 98 (292)
T ss_pred HHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHH-hhccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHhhcchHH
Confidence 3344554443 232566666699988887443221 211111111 122345556666666888999999999999999
Q ss_pred HHHHhhhhHHHHHHHHH-HHhhcccchhhhhhhhhhhhheeeeecCCCcch---HHHHHHHHHHHHHHHHHHHHHHHHhc
Q 038896 132 NQAVGATTPFFTALFAY-LMTFKREAWVTYATLVPVVAGVVIASEGEPGFH---LYGFIMCISATAARAFKSVLQGILLS 207 (334)
Q Consensus 132 ~~~l~~~~pi~~~il~~-~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~~~---~~G~~~~l~a~~~~a~~~v~~~~~~~ 207 (334)
++.+.++.|+++.+++. +++|||++++++.++.+.+.|++++...+...+ ..|+.+++.++++++.+.+..|+..
T Consensus 99 ~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~- 177 (292)
T COG0697 99 ASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS- 177 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999999999999997 777999999999999999999999987665443 5899999999999999999999974
Q ss_pred cCCCCCCHHHHHH-HHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHH
Q 038896 208 SEGERLNSMNLLL-YMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYS-ANLLNFLVTKHTSALTL 285 (334)
Q Consensus 208 ~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~ 285 (334)
+.++..... +..........+.. ..+.. .......+..+...++.+.. .....+..+++.++...
T Consensus 178 ----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~ 244 (292)
T COG0697 178 ----RLGPVTLALLLQLLLALLLLLLFF-LSGFG--------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLV 244 (292)
T ss_pred ----CCChHHHHHHHHHHHHHHHHHHHH-hcccc--------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 345555555 33331111111111 11111 01112224455555555553 45567888999999999
Q ss_pred HHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhh
Q 038896 286 QVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKR 331 (334)
Q Consensus 286 s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~ 331 (334)
+....++|+.+.+++++++||+++..+++|..+++.|+.+.+..++
T Consensus 245 ~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 290 (292)
T COG0697 245 ALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999999987743
No 20
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.86 E-value=3.1e-19 Score=146.88 Aligned_cols=252 Identities=15% Similarity=0.120 Sum_probs=198.9
Q ss_pred HHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhHHH
Q 038896 54 LNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQ 133 (334)
Q Consensus 54 ~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~ 133 (334)
+.|.++.. .. |..++..|...+.+++..+.+=.+ +..++++++..+..|...+.++.+.|.+++.+|.+.+.
T Consensus 30 ~Ak~LFP~--vG-~~g~t~lRl~~aaLIll~l~RPwr-----~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAV 101 (292)
T COG5006 30 FAKSLFPL--VG-AAGVTALRLAIAALILLALFRPWR-----RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAV 101 (292)
T ss_pred HHHHHccc--cC-hhhHHHHHHHHHHHHHHHHhhHHH-----hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhh
Confidence 66988887 45 999999999999999887544222 22368889999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecC---CCcchHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 038896 134 AVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEG---EPGFHLYGFIMCISATAARAFKSVLQGILLSSEG 210 (334)
Q Consensus 134 ~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~---~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~ 210 (334)
.+.++.|+.+.+++. + +.++.+.+.+.+.|..++.-. ..+.|+.|..+++.++.||+.|.+..||.-+
T Consensus 102 AiEF~GPL~vA~~~s----R--r~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~--- 172 (292)
T COG5006 102 AIEFTGPLAVALLSS----R--RLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGR--- 172 (292)
T ss_pred hhhhccHHHHHHHhc----c--chhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcc---
Confidence 999999998887765 2 344556666777777665432 2567899999999999999999999999854
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH-HHHHHhccchhHHHHHh
Q 038896 211 ERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLL-NFLVTKHTSALTLQVLG 289 (334)
Q Consensus 211 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~s~~~ 289 (334)
..+..+.+...+.++.++.+|+.....++.. +++.....-+.-++++...-++ ...++++.++.+++++.
T Consensus 173 -~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l--------~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~Ll 243 (292)
T COG5006 173 -AEHGTAGVAVGMLVAALIVLPIGAAQAGPAL--------FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLL 243 (292)
T ss_pred -cCCCchHHHHHHHHHHHHHhhhhhhhcchhh--------cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHH
Confidence 4577788888999999999998775544322 2233333444444444444333 56679999999999999
Q ss_pred hHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhh
Q 038896 290 NAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKR 331 (334)
Q Consensus 290 ~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~ 331 (334)
+++|.++.+.|++++||.+|+.||+|++.++.+..-.++..+
T Consensus 244 SLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~ 285 (292)
T COG5006 244 SLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR 285 (292)
T ss_pred HhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence 999999999999999999999999999999999886665433
No 21
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.86 E-value=2.9e-20 Score=161.12 Aligned_cols=227 Identities=17% Similarity=0.192 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCC--
Q 038896 101 SQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEP-- 178 (334)
Q Consensus 101 ~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~-- 178 (334)
+..+..+....+..+++...|.|+.+++++..+++.+++-+||..++.++..||+++.|.+++.+.++|+++++.+|.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 455666667777789999999999999999999999999999999999999999999999999999999999987632
Q ss_pred ------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcch
Q 038896 179 ------GFHLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQH 252 (334)
Q Consensus 179 ------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 252 (334)
+....|.++++++++.||.|.++.||...+++.++|.-.+..+.+++..+++.|...+.+....+..+ .+..
T Consensus 237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~--lP~~ 314 (416)
T KOG2765|consen 237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFE--LPSS 314 (416)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCccc--CCCC
Confidence 23478999999999999999999999887655688999999999999999998877665433222222 2222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhh
Q 038896 253 KFLWLLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEA 329 (334)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~ 329 (334)
..+...++.+.+..+...+.+.+++--++|++..+..++..+++++.++++-+.++|+.+++|.+.|++|....|..
T Consensus 315 ~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 315 TQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNIS 391 (416)
T ss_pred ceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecc
Confidence 33344555555556677888888999999999999999999999999999999999999999999999999998864
No 22
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=7.7e-19 Score=148.52 Aligned_cols=293 Identities=16% Similarity=0.212 Sum_probs=237.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-C-----CCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHH
Q 038896 32 KQTLFILSLVLLWYSSNIGVLLLNKYLLSN-Y-----GFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAK 105 (334)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~-~-----~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (334)
++.+...+++...+..-+...+++.-+.++ | .|.+|.++.++|.+.+.++......+.+.. ...++.++.
T Consensus 10 ~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~----~~~~apl~~ 85 (327)
T KOG1581|consen 10 NKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKE----LSGVAPLYK 85 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccccc----CCCCCchhH
Confidence 445555555555556656666666655543 2 367899999999999999987754433222 335677888
Q ss_pred HHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecC---C-----
Q 038896 106 IATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEG---E----- 177 (334)
Q Consensus 106 ~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~---~----- 177 (334)
+...++...+...+.+.|++|++-+..++.|++.-+-+++...++.|+|++..+++...++.+|+.+.... |
T Consensus 86 y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~ 165 (327)
T KOG1581|consen 86 YSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKS 165 (327)
T ss_pred HhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCcccc
Confidence 88889999999999999999999999999999999999999999999999999999999999999777532 1
Q ss_pred -CcchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHH
Q 038896 178 -PGFHLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLW 256 (334)
Q Consensus 178 -~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (334)
.+.++.|+.+....-+..++.+..++++.+ +.+++++.++++.++++++......+.. +... +..+....++..+
T Consensus 166 g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~--~~k~s~~~mM~~vNLf~~i~~~~~li~q-g~~~-~av~F~~~hp~~~ 241 (327)
T KOG1581|consen 166 GRENSPIGILLLFGYLLFDGFTNATQDSLFK--KYKVSSLHMMFGVNLFSAILNGTYLILQ-GHLL-PAVSFIKEHPDVA 241 (327)
T ss_pred CCCCchHhHHHHHHHHHHHhhHHhHHHHHhc--cCCccHhHHHHHHHHHHHHHHHHhhhcC-CCCc-hHHHHHHcChhHH
Confidence 134678999999999999999999999998 7789999999999999999887764333 2222 2222233445667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhhh
Q 038896 257 LLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKRR 332 (334)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~~ 332 (334)
.-++..+.++...+...++.+++-+|++....+..+..+++.++.+.+|.+++..|+.|..+++.|+.+-...|.|
T Consensus 242 ~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 242 FDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 7777778888888888888999999999999999999999999999999999999999999999998876655443
No 23
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.85 E-value=1.5e-22 Score=167.37 Aligned_cols=280 Identities=16% Similarity=0.175 Sum_probs=219.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHH
Q 038896 31 RKQTLFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLS 110 (334)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 110 (334)
++++.+++...+. +.++.++++..|.+.. + |..+.-.|+++-.++.+++..+. +.+. ..+++..++++..|
T Consensus 34 d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~----~-p~e~a~~r~l~~mlit~pcliy~-~~~v--~gp~g~R~~LiLRg 104 (346)
T KOG4510|consen 34 DKPNLGLLLLTVS-YFFNSCMVVSTKVLEN----D-PMELASFRLLVRMLITYPCLIYY-MQPV--IGPEGKRKWLILRG 104 (346)
T ss_pred CCCccCceehhhH-HHHhhHHHhhhhhhcc----C-hhHhhhhhhhhehhhhheEEEEE-eeee--ecCCCcEEEEEeeh
Confidence 3556777777777 6777777777775443 3 99999999877777776643222 1111 12344455666778
Q ss_pred HHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeec-----CC--------
Q 038896 111 TVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASE-----GE-------- 177 (334)
Q Consensus 111 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~-----~~-------- 177 (334)
+....+..+.|+|++|++.++++++...+|++|.++++.++||+++..+.++..+.+.|+++++. +|
T Consensus 105 ~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s 184 (346)
T KOG4510|consen 105 FMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSS 184 (346)
T ss_pred hhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccc
Confidence 88888999999999999999999999999999999999999999999999999999999999963 11
Q ss_pred -CcchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHH
Q 038896 178 -PGFHLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLW 256 (334)
Q Consensus 178 -~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (334)
.+.+..|...++.+.+..|.-.++.|++-| +.|....+.|.++++.+..++.....+...++ +...-+
T Consensus 185 ~~~~~~~gt~aai~s~lf~asvyIilR~iGk----~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP-------~cgkdr 253 (346)
T KOG4510|consen 185 QVEYDIPGTVAAISSVLFGASVYIILRYIGK----NAHAIMSVSYFSLITLVVSLIGCASIGAVQLP-------HCGKDR 253 (346)
T ss_pred cccccCCchHHHHHhHhhhhhHHHHHHHhhc----cccEEEEehHHHHHHHHHHHHHHhhccceecC-------ccccce
Confidence 123457888888888888888888888744 66777777788888888777665544322221 111225
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 257 LLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
++++..|++++..+......+|+..|...++..+.+.+++.++++++|+|.+|++.|.|+++++.+..+....|
T Consensus 254 ~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 254 WLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred EEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 67777789999999998999999999999999999999999999999999999999999999998888776554
No 24
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.83 E-value=5.4e-20 Score=149.57 Aligned_cols=255 Identities=17% Similarity=0.272 Sum_probs=208.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHH
Q 038896 64 FRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFT 143 (334)
Q Consensus 64 ~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~ 143 (334)
|.+...+++.|+.+..+..-++..++ ++.+. ++...+.+...++.|.+++...|.|+||+|-++..+-+++.|+-+
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~ir---~~~~~-D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPV 125 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFLIR---KKTEI-DNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPV 125 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhheeec---ccccc-cCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcce
Confidence 66889999999999998876633222 21122 455677788889999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccchhhhhhhhhhhhheeeeecCCC-------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHH
Q 038896 144 ALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEP-------GFHLYGFIMCISATAARAFKSVLQGILLSSEGERLNSM 216 (334)
Q Consensus 144 ~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~-------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~ 216 (334)
++++.++.+++++++++..+++++.|+++..+.+. +....|-++.+++-...+.....++|+.. .+.-+..
T Consensus 126 MilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira--~yq~~g~ 203 (337)
T KOG1580|consen 126 MILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRA--SYQRTGT 203 (337)
T ss_pred eeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHH--hhccCch
Confidence 99999999999999999999999999999987642 22347999999999999999999999855 4455777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHH
Q 038896 217 NLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVA 296 (334)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~ 296 (334)
.++.+.++++.+.+....++. +..++...... ..+..++-+...++.+...+...+..+...+|++-|++...+..++
T Consensus 204 ~MM~~~NlwStL~Lg~g~lfT-GElweF~yF~~-RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFT 281 (337)
T KOG1580|consen 204 SMMFYTNLWSTLYLGAGLLFT-GELWEFFYFVQ-RHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFT 281 (337)
T ss_pred hhHHHHHHHHHHHhhhhheeh-hhHHHHHHHHH-hccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHH
Confidence 999999999999887665544 32232222222 2344466667777777777888888999999999999999999999
Q ss_pred HHHHHHHhCCccccchhhhHHHHHHHHHHh
Q 038896 297 VVISILLFRNPVTFIGIAGYTMTVLGVAAY 326 (334)
Q Consensus 297 ~~~~~~~~~e~~s~~~~~G~~lii~G~~~~ 326 (334)
++.++++++++++..||+|.++++.|...=
T Consensus 282 il~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 282 ILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 999999999999999999999999887653
No 25
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.81 E-value=8.3e-18 Score=140.30 Aligned_cols=286 Identities=17% Similarity=0.104 Sum_probs=213.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhh-----CCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcc-----------cCchHHHH
Q 038896 41 VLLWYSSNIGVLLLNKYLLSN-----YGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQT-----------VKSRSQLA 104 (334)
Q Consensus 41 ~~~~~~~~~~~~~~~K~~~~~-----~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~-----------~~~~~~~~ 104 (334)
-......+...++..|+.=+. .+|++|...+..-++.-++++.++...+.+...+. .++.-...
T Consensus 8 s~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~ 87 (372)
T KOG3912|consen 8 SLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPV 87 (372)
T ss_pred hhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcc
Confidence 334445666667788887552 45788988888777776666666433322211110 00112245
Q ss_pred HHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCC------
Q 038896 105 KIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEP------ 178 (334)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~------ 178 (334)
..++.+++...+..+.|.|+.+++++.+|+++....+|+.+++.-+++++.+.++|+++.....|++.+...|.
T Consensus 88 lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p 167 (372)
T KOG3912|consen 88 LFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDP 167 (372)
T ss_pred eecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCC
Confidence 56778999999999999999999999999999999999999999999999999999999999999988875432
Q ss_pred ----cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhC----hhh--------H
Q 038896 179 ----GFHLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIME----PKV--------L 242 (334)
Q Consensus 179 ----~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~--------~ 242 (334)
+.-..|+.+.+.+-+.-|.+.++.+|.++ +.+++|.+...|.++.|.+++........ ++. +
T Consensus 168 ~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~--~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~ 245 (372)
T KOG3912|consen 168 YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLK--KSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVL 245 (372)
T ss_pred ccccccchhhhHHHHHHHHHHHHHHHHHHhhhh--hccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcch
Confidence 22357999999999999999999999887 66889999999999999766554433321 100 1
Q ss_pred HHHH---HhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHH
Q 038896 243 EVIV---SLGRQHKFLWLLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMT 319 (334)
Q Consensus 243 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li 319 (334)
+++. ......+.....+....+.-.++|+......|..|+++..++..++..+..+++.....|.++..+++|.++.
T Consensus 246 eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliL 325 (372)
T KOG3912|consen 246 EDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLIL 325 (372)
T ss_pred hhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1111222222222222233334567777778999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh
Q 038896 320 VLGVAAYGE 328 (334)
Q Consensus 320 i~G~~~~~~ 328 (334)
+.|+++|+.
T Consensus 326 i~Gi~lY~~ 334 (372)
T KOG3912|consen 326 IMGIILYNQ 334 (372)
T ss_pred HHHHHHHHH
Confidence 999999984
No 26
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.80 E-value=2.5e-18 Score=147.51 Aligned_cols=215 Identities=20% Similarity=0.235 Sum_probs=171.7
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCC
Q 038896 99 SRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEP 178 (334)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~ 178 (334)
+++...++...+++|++.+.+.+.++++++++.++++.++..++|++++++++|+|.+++||.++.+.++|+++...++.
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 45556777788999999999999999999999999999999999999999999999999999999999999998863221
Q ss_pred -----------------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhh
Q 038896 179 -----------------GFHLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKV 241 (334)
Q Consensus 179 -----------------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (334)
.....|..+.++++++.++..|+.++++|+ .+.+.+......+..|.++.++.....++..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~--~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~ 170 (244)
T PF04142_consen 93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKR--SNVSLWIQNMQLYLFGILFNLLALLLSDGSA 170 (244)
T ss_pred cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcc--cchhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 113579999999999999999999999994 4467777777778888888777655544332
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHH
Q 038896 242 LEVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMT 319 (334)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li 319 (334)
..+.-....++...|..++..++.+.. ....+|+.+...-+....+..+++.+.++.+||.++|....+|..++
T Consensus 171 ~~~~g~f~G~~~~~~~~i~~~a~gGll----va~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 171 ISESGFFHGYSWWVWIVIFLQAIGGLL----VAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred cccCCchhhcchHHHHHHHHHHHhhHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 211111122333345555555555544 34558999999999999999999999999999999999999998653
No 27
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.80 E-value=7.5e-17 Score=142.88 Aligned_cols=251 Identities=14% Similarity=0.157 Sum_probs=183.2
Q ss_pred HHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhHH
Q 038896 53 LLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFN 132 (334)
Q Consensus 53 ~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~ 132 (334)
...|... +.+.++. . |...+.++...+....+ .++ ...++.+...+..|+..+.++.+++.+.++++++.+
T Consensus 18 ~~~k~~~---g~~~~~~-~--~~~~g~l~~~~~~~~~~-~~~--~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a 88 (290)
T TIGR00776 18 LINVKIG---GGPYSQT-L--GTTFGALILSIAIAIFV-LPE--FWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKT 88 (290)
T ss_pred HHHhccC---CCHHHHH-H--HHHHHHHHHHHHHHHHh-CCc--ccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHH
Confidence 3456544 3553333 2 67777776665444333 221 123566666777778889999999999999999999
Q ss_pred HHHhh-hhHHHHHHHHHHHhhcccchhh----hhhhhhhhhheeeeecCCCc-------ch-HHHHHHHHHHHHHHHHHH
Q 038896 133 QAVGA-TTPFFTALFAYLMTFKREAWVT----YATLVPVVAGVVIASEGEPG-------FH-LYGFIMCISATAARAFKS 199 (334)
Q Consensus 133 ~~l~~-~~pi~~~il~~~~~~e~~~~~~----~~~v~l~~~G~~l~~~~~~~-------~~-~~G~~~~l~a~~~~a~~~ 199 (334)
..+.+ +.+++..+.+.+++||+.++++ .+|+++.+.|+++....+.+ .+ ..|++++++++++|+.|.
T Consensus 89 ~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~ 168 (290)
T TIGR00776 89 MPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYV 168 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHH
Confidence 98888 8889999999999999999999 99999999999888653211 33 689999999999999999
Q ss_pred HHHHHHhccCCCCCCHHHH---HHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 038896 200 VLQGILLSSEGERLNSMNL---LLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLV 276 (334)
Q Consensus 200 v~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (334)
+..|+. +.||... +++....+..+..+.. ..+.+ . .....+..++ .|++....+..++..
T Consensus 169 ~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~----~-----~~~~~~~~~~-~Gi~~~ia~~~y~~~ 231 (290)
T TIGR00776 169 VVAKAF------GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAKP----L-----KKYAILLNIL-PGLMWGIGNFFYLFS 231 (290)
T ss_pred HHHHHc------CCCcceehhHHHHHHHHHHHHHHHHH-hcccc----h-----HHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999975 2577776 4444444444333221 00011 0 1112233333 666654445556677
Q ss_pred Hh-ccchhHHHHHhhHHHHHHHHHHHHHhCCccccchh----hhHHHHHHHHHHhhhh
Q 038896 277 TK-HTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGI----AGYTMTVLGVAAYGEA 329 (334)
Q Consensus 277 ~~-~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~----~G~~lii~G~~~~~~~ 329 (334)
.+ +.++.+.+++..++|+.+++.++++++|+.++.++ +|.++++.|+.+....
T Consensus 232 ~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 232 AQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 88 99999999999999999999999999999999999 9999999999876543
No 28
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.78 E-value=1e-17 Score=134.69 Aligned_cols=145 Identities=34% Similarity=0.577 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhc-----chhHH
Q 038896 184 GFIMCISATAARAFKSVLQGILLSSE---GERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGR-----QHKFL 255 (334)
Q Consensus 184 G~~~~l~a~~~~a~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 255 (334)
|+++++.++++.++++++.|+.+++. +++.++.++.+|+++.+.+.++|..+..|++.......... .....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78899999999999999999999852 36889999999999999999999999888776443322111 14567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhh
Q 038896 256 WLLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGE 328 (334)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~ 328 (334)
+..++.+|+.++..+++.+++++++||++.++.+.+|.+...++|++++||++|..+++|+++.+.|.++|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999975
No 29
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.78 E-value=3.2e-17 Score=136.23 Aligned_cols=290 Identities=17% Similarity=0.174 Sum_probs=231.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHH
Q 038896 33 QTLFILSLVLLWYSSNIGVLLLNKYLLSNYGFR-FPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLST 111 (334)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~-~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 111 (334)
+...-+++.....+.-...-..+.++++..+|. +-|.+++.|+++-..+.+.... ....+ +....||.+..++.
T Consensus 40 kw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~--~~~~k---~r~iP~rtY~~la~ 114 (367)
T KOG1582|consen 40 KWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ--LIQTK---RRVIPWRTYVILAF 114 (367)
T ss_pred hhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE--eeccc---ceecchhHhhhhHh
Confidence 344455555555566666677899999988886 6799999999887655444211 11121 24566888888899
Q ss_pred HHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCC----CcchHHHHHH
Q 038896 112 VFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGE----PGFHLYGFIM 187 (334)
Q Consensus 112 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~----~~~~~~G~~~ 187 (334)
+....+.+.+-++.|++-+.-.++|.+..+-+++.+.++-++|+.+.++.+..+...|.++.+..| +++|..|+.+
T Consensus 115 ~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~m 194 (367)
T KOG1582|consen 115 LTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMM 194 (367)
T ss_pred hhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHH
Confidence 999999999999999999999999999999999999999999999999999999999999887654 5778899999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHH
Q 038896 188 CISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAY 267 (334)
Q Consensus 188 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (334)
.-++-++.|.-.-.+++.++ ..+.+..++.+|...+|.+.++......+ ..+..+..-..++.......++-+..++
T Consensus 195 IsgALl~DA~iGNvQEk~m~--~~~~ss~EmvfySy~iG~vflf~~mvlTg-e~f~a~~fcaehp~~tyGy~~~~s~~gy 271 (367)
T KOG1582|consen 195 ISGALLADAVIGNVQEKAMK--MNPASSSEMVFYSYGIGFVFLFAPMVLTG-ELFSAWTFCAEHPVRTYGYAFLFSLAGY 271 (367)
T ss_pred HHHHHHHHHHhhHHHHHHHh--hCCCCcceEEEeeecccHHHHHHHHHhcc-cchhhhHHHHhCcHhHHHHHHHHHHHhH
Confidence 99999999999999999988 44557789999999999998877665553 3344444433333333444445555566
Q ss_pred HHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 268 SANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 268 ~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
.........++..+|.++..++..+..+++++++++|..++|.++.-|..+++.|+++--+.|
T Consensus 272 lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 272 LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 655666677999999999999999999999999999999999999999999999999876555
No 30
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.77 E-value=9.6e-16 Score=129.84 Aligned_cols=266 Identities=15% Similarity=0.094 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCC-cc-cCchHHHHHHHHHHHHHHHHhhhhhhh
Q 038896 46 SSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPL-QT-VKSRSQLAKIATLSTVFCGSVVGGNIS 123 (334)
Q Consensus 46 ~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~~~~~~~~~~~~~~~a 123 (334)
+....+.++-|.+-. .| +..+..-|.+.....+..+....|..+. .+ ..+++.+......+..-..+.....+|
T Consensus 17 ~lwG~lp~y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWA 92 (293)
T COG2962 17 LLWGLLPLYFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWA 92 (293)
T ss_pred HHHHHHHHHHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhhee
Confidence 333445667776543 56 8999999999988888876555543331 11 223445555666666667888888899
Q ss_pred ccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 038896 124 LRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEPGFHLYGFIMCISATAARAFKSVLQG 203 (334)
Q Consensus 124 l~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~ 203 (334)
.+.-.+-.++.-....|++.++++.+++|||+++.|+++++++.+||..-.....+..+. ++.-++.++.|...-|
T Consensus 93 vn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwv----al~la~sf~~Ygl~RK 168 (293)
T COG2962 93 VNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWV----ALALALSFGLYGLLRK 168 (293)
T ss_pred cCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHH----HHHHHHHHHHHHHHHH
Confidence 999888889999999999999999999999999999999999999999888777777754 4455678888988866
Q ss_pred HHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 038896 204 ILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLVTKHTSAL 283 (334)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 283 (334)
+. ++|+.+-.+.....-.+..+.+....+.... .....+...+.+++..|..+..--.....+-++.+-.
T Consensus 169 ~~------~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~----~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls 238 (293)
T COG2962 169 KL------KVDALTGLTLETLLLLPVALIYLLFLADSGQ----FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLS 238 (293)
T ss_pred hc------CCchHHhHHHHHHHHhHHHHHHHHHHhcCch----hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHH
Confidence 65 5788887777766666665555544432211 1111234457778888888766555566678999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhh
Q 038896 284 TLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEA 329 (334)
Q Consensus 284 ~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~ 329 (334)
+.+++.+++|....+++++++||+++..++...+.+-.|..+|...
T Consensus 239 ~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d 284 (293)
T COG2962 239 TLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID 284 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999864
No 31
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=1.8e-15 Score=131.77 Aligned_cols=279 Identities=17% Similarity=0.206 Sum_probs=211.0
Q ss_pred HHHHHHHHHHHHHhhhCC--CCchHHHHHHHHHHHHHHHHHHHHHHh----ccCCccc-----CchHHHHHHHHHHHHHH
Q 038896 46 SSNIGVLLLNKYLLSNYG--FRFPIFLTMCHMSACAILSYVSIVFLK----IVPLQTV-----KSRSQLAKIATLSTVFC 114 (334)
Q Consensus 46 ~~~~~~~~~~K~~~~~~~--~~~p~~l~~~r~~~~~l~~~~~~~~~~----~~~~~~~-----~~~~~~~~~l~~~~~~~ 114 (334)
+-+.+.....|+.-++++ |- |.+..++--+...+++..+..... .+..+.+ ..+....+....+++|+
T Consensus 25 ~~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYa 103 (345)
T KOG2234|consen 25 AQNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYA 103 (345)
T ss_pred HHHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHH
Confidence 445556667777666532 44 677777766777777666443321 1111111 13333555666688999
Q ss_pred HHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCC-----------CcchHH
Q 038896 115 GSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGE-----------PGFHLY 183 (334)
Q Consensus 115 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~-----------~~~~~~ 183 (334)
+.+.+.+.++.+.+++++++...+....|.++..++++||.+++||.++++...|++++-.+. .+....
T Consensus 104 lqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~ 183 (345)
T KOG2234|consen 104 LQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFL 183 (345)
T ss_pred HhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhh
Confidence 999999999999999999999999999999999999999999999999999999998886211 122468
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHH-hhcchhHHHHHHHHH
Q 038896 184 GFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVS-LGRQHKFLWLLLLIN 262 (334)
Q Consensus 184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 262 (334)
|....+.+++..++..++.++++| +.+.+.+...--.+..|.++.+......++.... +.. ...++...|..++..
T Consensus 184 G~~avl~~c~~SgfAgvYfEkiLK--~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~-~~gff~G~s~~vw~vVl~~ 260 (345)
T KOG2234|consen 184 GLVAVLVACFLSGFAGVYFEKILK--GSNVSLWIRNIQLYFFGILFNLLTILLQDGEAIN-EYGFFYGYSSIVWLVVLLN 260 (345)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhhccccccc-cCCccccccHHHHHHHHHH
Confidence 999999999999999999999998 5566777777777777877776666555544332 111 123444557777777
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhhh
Q 038896 263 STMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKRR 332 (334)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~~ 332 (334)
++-+... ...+|+.+-..-+....+..+++.+.++.++|.++|..-.+|..+++.++.+|+..+.+
T Consensus 261 a~gGLlv----s~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 261 AVGGLLV----SLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred hccchhH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence 7666554 44479999999999999999999999999999999999999999999999999965543
No 32
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.74 E-value=2.9e-17 Score=136.91 Aligned_cols=266 Identities=18% Similarity=0.244 Sum_probs=205.1
Q ss_pred HHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhccc-cchh
Q 038896 52 LLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRY-LPVS 130 (334)
Q Consensus 52 ~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~-~~~~ 130 (334)
.+.-..+.++ +-..-..+++.|+++-+.--++.- .+.. ..+++-..+.+...-..+...+.+.|+++++ +|.+
T Consensus 19 vv~lE~L~~~-~pgsgNLITFaqFlFia~eGlif~---skf~--~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~P 92 (330)
T KOG1583|consen 19 VVFLELLVRN-EPGSGNLITFAQFLFIATEGLIFT---SKFF--TVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMP 92 (330)
T ss_pred HHHHHHHHHh-CCCCeeehHHHHHHHHHHhceeee---cccc--ccCCCCchhhhheehheeeeeeeeccceeeecccce
Confidence 3455666665 223347889999987765555421 1111 1123444556666666778889999999998 8999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecC---CCc-------c---------hHHHHHHHHHH
Q 038896 131 FNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEG---EPG-------F---------HLYGFIMCISA 191 (334)
Q Consensus 131 ~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~---~~~-------~---------~~~G~~~~l~a 191 (334)
...++++-+++-+++++++++|+|++.+|+.++.++.+|+++.+.. |.. . -..|+.+...+
T Consensus 93 lHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~a 172 (330)
T KOG1583|consen 93 LHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFA 172 (330)
T ss_pred EEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888631 110 0 13588899999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhc-----------chhHHHHHHH
Q 038896 192 TAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGR-----------QHKFLWLLLL 260 (334)
Q Consensus 192 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 260 (334)
.+..|.-.+++++..| +.+-++-+.++|....+... .++...+-.+++..... .-|..|..++
T Consensus 173 l~~sa~mgiyqE~~Y~--kyGKh~~EalFytH~LsLP~----Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl 246 (330)
T KOG1583|consen 173 LLLSAYMGIYQETTYQ--KYGKHWKEALFYTHFLSLPL----FLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL 246 (330)
T ss_pred HHHHHHHHHHHHHHHH--HhcCChHHHHHHHHHhccch----HHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHH
Confidence 9999999999999988 45669999999999887644 33333333333222111 1345688888
Q ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhh
Q 038896 261 INSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEA 329 (334)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~ 329 (334)
.+++..+...-..+.....++++++++..+++..++.+++.++|++++++.+|+|.+++..|.++|...
T Consensus 247 ~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~ 315 (330)
T KOG1583|consen 247 FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV 315 (330)
T ss_pred HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 888888877777788889999999999999999999999999999999999999999999999999743
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.61 E-value=1.5e-15 Score=125.30 Aligned_cols=278 Identities=13% Similarity=0.118 Sum_probs=209.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHH
Q 038896 33 QTLFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTV 112 (334)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 112 (334)
+.+....+-=.-..+..+..+.+..+-+. +.+.|...+++....-+++-.++..+++ + . -+..|+++...++.
T Consensus 15 k~li~~~LGQiLSL~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~---~-~~~~~~hYilla~~ 87 (336)
T KOG2766|consen 15 KTLIGLGLGQILSLLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR--K---Y-IKAKWRHYILLAFV 87 (336)
T ss_pred hhhheeeHHHHHHHHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh--H---H-HHHHHHHhhheeEE
Confidence 33333333333334445556677766655 5788999999998888877777555433 1 1 34556678888888
Q ss_pred HHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCC--------cchHHH
Q 038896 113 FCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEP--------GFHLYG 184 (334)
Q Consensus 113 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~--------~~~~~G 184 (334)
..-++.+-..|.||++....+.+..-..+.+++++|+++|.|..+.++.|+++.+.|+++++.+|. +....|
T Consensus 88 DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~G 167 (336)
T KOG2766|consen 88 DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKG 167 (336)
T ss_pred eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccC
Confidence 888888888999999999999999999999999999999999999999999999999999886542 223579
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHH
Q 038896 185 FIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINST 264 (334)
Q Consensus 185 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (334)
+++.++++-+||..++..+.+.| +.|..+.+...++.|.++..+. +.+|..+... ..++.. ....+...+
T Consensus 168 D~lvi~GATlYaVSNv~EEflvk----n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~t----l~w~~~-i~~yl~f~L 237 (336)
T KOG2766|consen 168 DFLVIAGATLYAVSNVSEEFLVK----NADRVELMGFLGLFGAIISAIQ-FIFERHHVST----LHWDSA-IFLYLRFAL 237 (336)
T ss_pred cEEEEecceeeeeccccHHHHHh----cCcHHHHHHHHHHHHHHHHHHH-Hhhhccceee----EeehHH-HHHHHHHHH
Confidence 99999999999999999999987 7799999999999999999888 4555433221 112111 112222333
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhh
Q 038896 265 MAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEA 329 (334)
Q Consensus 265 ~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~ 329 (334)
..++.....-..++..|++..++........++++ -.||-+.+|...+..+.+..|.++|..+
T Consensus 238 ~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 238 TMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR 300 (336)
T ss_pred HHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence 33333333344588899999988888888988888 6678789999999999999999999643
No 34
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.46 E-value=2.1e-13 Score=108.49 Aligned_cols=222 Identities=14% Similarity=0.130 Sum_probs=170.5
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecCCC
Q 038896 99 SRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEP 178 (334)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~ 178 (334)
-|..+++..|.+++..+.++.+..+++.++++.++.+..+.-.|+.+++++.+|+|+...+++++++++.|+++..+.|.
T Consensus 49 ik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 49 IKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred eeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 45567778888999999999999999999999999999999999999999999999999999999999999999997665
Q ss_pred c--chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHH----HHHHH-H-hChhhHHHHHHhhc
Q 038896 179 G--FHLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVL----LPAAL-I-MEPKVLEVIVSLGR 250 (334)
Q Consensus 179 ~--~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----~~~~~-~-~~~~~~~~~~~~~~ 250 (334)
+ ....|+.+++++++..|+|-|..|+...+ .+--....+++..+..-+ .|... . +.-++++.. .
T Consensus 129 ~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGn----An~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsF----A 200 (290)
T KOG4314|consen 129 EHADEIIGIACAVGSAFMAALYKVLFKMFIGN----ANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSF----A 200 (290)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcc----CcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHH----h
Confidence 3 46789999999999999999999999862 232333344444333322 22211 1 111111111 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 251 QHKFLWLLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
..+ |..+...+......++.....+..+.|...|+-.....+....++.++-+-..+...+.|..++..|.++.-...
T Consensus 201 ~~P--WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 201 AAP--WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred hCC--chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 111 445555555666667777777888999999999999999999999887666788899999999999988775443
No 35
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.33 E-value=8.1e-12 Score=106.65 Aligned_cols=194 Identities=15% Similarity=0.124 Sum_probs=126.2
Q ss_pred cchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeee--------------------cCCC-------c
Q 038896 127 LPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIAS--------------------EGEP-------G 179 (334)
Q Consensus 127 ~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~--------------------~~~~-------~ 179 (334)
++++.....++..++++++..+...+||++..++++.++...|++... .++. .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 456677788888888888888888888888888888888777776422 1111 2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHH
Q 038896 180 FHLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLL 259 (334)
Q Consensus 180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (334)
....|....+.+.++.++..+++++..|+ ++.+.+.......+.+.+.........+............++...+..+
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKD--GDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG 159 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccC--CCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH
Confidence 23567788888889999999999998662 2222222222222223222111111111111111000111222223333
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHh
Q 038896 260 LINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAY 326 (334)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~ 326 (334)
+..++ .+.+..+.+++.++.+.++...++++++.++++++|||+++..+++|..+++.|+.+|
T Consensus 160 ~~~a~----~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 160 LLNVG----GGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHh----cCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 33322 3344677899999999999999999999999999999999999999999999998765
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.31 E-value=2.6e-11 Score=89.94 Aligned_cols=127 Identities=14% Similarity=-0.005 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhcc
Q 038896 46 SSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLR 125 (334)
Q Consensus 46 ~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~ 125 (334)
.+.....++.|.-++. .| |.+-+..|.++..+.+..+....++.+.....+++.+......|+..+++..++|.|++
T Consensus 13 ~fa~L~~iF~KIGl~~--vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk 89 (140)
T COG2510 13 LFAGLTPIFAKIGLEG--VD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALK 89 (140)
T ss_pred HHHHHHHHHHHHhccc--cC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHh
Confidence 3344456789999997 66 99999999999988888766656655443334677788888889889999999999999
Q ss_pred ccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeec
Q 038896 126 YLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASE 175 (334)
Q Consensus 126 ~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~ 175 (334)
.-++|...-+..++|+++.+++++++|||++..+|+|+.++.+|++++..
T Consensus 90 ~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 90 KGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred cCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999988753
No 37
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.26 E-value=1.3e-11 Score=95.19 Aligned_cols=118 Identities=19% Similarity=0.334 Sum_probs=96.8
Q ss_pred HHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHH-HHHHhhhhhhhccccch
Q 038896 51 VLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTV-FCGSVVGGNISLRYLPV 129 (334)
Q Consensus 51 ~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~~~~~ 129 (334)
....+|...++ +| |...+.+|+..+.+ +..+....+..+..+. +.+.+...+..+.+ ..++..+.+.+++++++
T Consensus 6 ~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 80 (126)
T PF00892_consen 6 YSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPFKNL-SPRQWLWLLFLGLLGTALAYLLYFYALKYISA 80 (126)
T ss_pred HHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccccCC-ChhhhhhhhHhhccceehHHHHHHHHHHhcch
Confidence 45688988887 77 99999999999997 5544444433332223 45556666666766 58999999999999999
Q ss_pred hHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeee
Q 038896 130 SFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIA 173 (334)
Q Consensus 130 ~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~ 173 (334)
+.++++.+++|+++.+++++++||+++.++++|+++++.|++++
T Consensus 81 ~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 81 SIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998765
No 38
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.19 E-value=1.3e-10 Score=86.29 Aligned_cols=135 Identities=18% Similarity=0.222 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHH
Q 038896 184 GFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINS 263 (334)
Q Consensus 184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (334)
..++++++++.+++..++.|--++ +.||...+..-+....+++.......+..... ...++..|..++++|
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~----~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-----~~~~~k~~lflilSG 74 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLE----GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG-----GEIGPKSWLFLILSG 74 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc----ccCccHHHHHHHHHHHHHHHHHHHhcCceecc-----cccCcceehhhhHHH
Confidence 467999999999999999999876 77888888888888888887776665432221 112344477888899
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 264 TMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
+.+...-+.+|+++|.-.+..+....-..++++++++++++||++|..+++|+++++.|.++..
T Consensus 75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 8888878889999999999999999999999999999999999999999999999999987654
No 39
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.17 E-value=2.5e-10 Score=88.01 Aligned_cols=124 Identities=24% Similarity=0.315 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHH-HHHHHH
Q 038896 193 AARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTM-AYSANL 271 (334)
Q Consensus 193 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 271 (334)
++||.+.+..|+..+ +.|+....++....+.+ +.+.....+.... ...+...+......+.+ ....+.
T Consensus 1 ~~~a~~~~~~k~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK----KISPLSITFWRFLIAGI-LLILLLILGRKPF------KNLSPRQWLWLLFLGLLGTALAYL 69 (126)
T ss_pred ceeeeHHHHHHHHhc----cCCHHHHHHHHHHHHHH-HHHHHHhhccccc------cCCChhhhhhhhHhhccceehHHH
Confidence 467889999999876 58999999999999998 6666555543321 11122223334444444 455566
Q ss_pred HHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 272 LNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 272 ~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
..+.++++.++...++..+++|+++.++++++++|++++.+++|+++++.|+.+.+
T Consensus 70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 68889999999999999999999999999999999999999999999999998764
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.08 E-value=2.6e-10 Score=86.50 Aligned_cols=107 Identities=13% Similarity=0.126 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC-cccCchHHHHHHHHHHHHH-HHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHH
Q 038896 72 MCHMSACAILSYVSIVFLKIVPL-QTVKSRSQLAKIATLSTVF-CGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYL 149 (334)
Q Consensus 72 ~~r~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~ 149 (334)
.+|++++.+.+..+....++.+. .+..+++.+......+++. ..++.+.++|+++.| +....+.+++|+++.+++.+
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 47888888887775554433221 1111234455566666666 488999999999999 68889999999999999999
Q ss_pred HhhcccchhhhhhhhhhhhheeeeecCCCc
Q 038896 150 MTFKREAWVTYATLVPVVAGVVIASEGEPG 179 (334)
Q Consensus 150 ~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~ 179 (334)
++|||++++++.+++++++|++++..+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999877654
No 41
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.01 E-value=6.5e-08 Score=83.12 Aligned_cols=239 Identities=15% Similarity=0.135 Sum_probs=167.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCCcccC-chHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHh-hhhHHHHH
Q 038896 67 PIFLTMCHMSACAILSYVSIVFLKIVPLQTVK-SRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVG-ATTPFFTA 144 (334)
Q Consensus 67 p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~ 144 (334)
|......-.+-+.++......+. ++ ..+ +...+...+..|++..+++...+.+++++.+|.+.=+. ..+-+.+.
T Consensus 12 ~~~Q~lG~t~Gali~alv~~~~~--~p--~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~s 87 (269)
T PF06800_consen 12 PANQILGTTIGALIFALVVFLFR--QP--AFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTS 87 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--CC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHH
Confidence 55555444445555444432221 12 222 34778888999999999999999999999988776555 77788899
Q ss_pred HHHHHHhhcccchhhh----hhhhhhhhheeeeecCCCc--------chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 038896 145 LFAYLMTFKREAWVTY----ATLVPVVAGVVIASEGEPG--------FHLYGFIMCISATAARAFKSVLQGILLSSEGER 212 (334)
Q Consensus 145 il~~~~~~e~~~~~~~----~~v~l~~~G~~l~~~~~~~--------~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~ 212 (334)
+.++++++|-.+..++ .+++++++|+.+.+..|.+ ....|....+++++.|..|.+..|.. +
T Consensus 88 l~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~------~ 161 (269)
T PF06800_consen 88 LIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF------H 161 (269)
T ss_pred HHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc------C
Confidence 9999999997766664 4788999999988765421 23569999999999999999998774 5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHH
Q 038896 213 LNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAK 292 (334)
Q Consensus 213 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~ 292 (334)
.|++....=++.-..+....+....+....+ .. .+.-+.+|++-...|..++...++.+..+.=.+..+.
T Consensus 162 ~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~---------k~-~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~ 231 (269)
T PF06800_consen 162 VSGWSAFLPQAIGMLIGAFIFNLFSKKPFFE---------KK-SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLG 231 (269)
T ss_pred CChhHhHHHHHHHHHHHHHHHhhcccccccc---------cc-hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHH
Confidence 6887777655554433333333322111111 01 1222444555555577778888999999999999999
Q ss_pred HHHHHHHHHHHhCCccccc----hhhhHHHHHHHHHH
Q 038896 293 GAVAVVISILLFRNPVTFI----GIAGYTMTVLGVAA 325 (334)
Q Consensus 293 ~v~~~~~~~~~~~e~~s~~----~~~G~~lii~G~~~ 325 (334)
.+.+.+.+.++++|+=+.. .++|.++++.|..+
T Consensus 232 vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 232 VVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 9999999999999988765 45688888877653
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.96 E-value=7.5e-08 Score=85.89 Aligned_cols=142 Identities=10% Similarity=0.063 Sum_probs=108.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHH
Q 038896 178 PGFHLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWL 257 (334)
Q Consensus 178 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (334)
.+....|.++.++++++|+...+..|.. . +.+|.++..+...++.+++.+........ ....... .+...+.
T Consensus 3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~----~~~~~~~~~~R~~~a~~~l~~~~~~~~~~--~~~~~~~-~~~~~~~ 74 (296)
T PRK15430 3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-Y----YVPADEILTHRVIWSFFFMVVLMSICRQW--SYLKTLI-QTPQKIF 74 (296)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHh-c----CCCHHHHHHHHHHHHHHHHHHHHHHHccH--HHHHHHH-cCHHHHH
Confidence 3445689999999999999999999864 3 58999999999999988777665433211 1100000 1112223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 258 LLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
....++........+.+++++++++...++..+..|++..++++++++|+++..+++|.++.+.|+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 75 MLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 3334455555556678999999999999999999999999999999999999999999999999998764
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.95 E-value=7.4e-08 Score=84.10 Aligned_cols=139 Identities=15% Similarity=0.108 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhh-HHHHHHhhcchhHHHHHHHH
Q 038896 183 YGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKV-LEVIVSLGRQHKFLWLLLLI 261 (334)
Q Consensus 183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 261 (334)
.|..+.++++++|+...+..|.. . +.+|.++.++-...+.+++.+......... ....... ......+..+..
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~----~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 75 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-K----PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKR-IQKRPLILSLLL 75 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-c----cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhC-cccchHHHHHHH
Confidence 48899999999999999999983 3 489999999999999888776654432111 0000100 011112344556
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 262 NSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
.++.........+++++++++.+.++..+..|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus 76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 666666666778889999999999999999999999999999999999999999999999988654
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.84 E-value=1e-07 Score=84.34 Aligned_cols=132 Identities=14% Similarity=0.139 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhC-hhhHHHHHHhhcchhHHHHHHHHHH
Q 038896 185 FIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIME-PKVLEVIVSLGRQHKFLWLLLLINS 263 (334)
Q Consensus 185 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (334)
..+.+++++++|.+.+..|+..+ +.++. ..+....+.+.+.|...... ...+ .......+...+.++
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~----~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 70 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHAD----KEPDF--LWWALLAHSVLLTPYGLWYLAQVGW------SRLPATFWLLLAISA 70 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC----chhHH--HHHHHHHHHHHHHHHHHHhcccCCC------CCcchhhHHHHHHHH
Confidence 56889999999999999998765 22333 35555666666667654321 1000 011122244566667
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhh
Q 038896 264 TMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGE 328 (334)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~ 328 (334)
+.........+.+.++.++...+++.+..|+++.++++++++|+++..+++|.++++.|+.+...
T Consensus 71 ~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 71 VANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 66777777788899999999999999999999999999999999999999999999999987654
No 45
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.82 E-value=1.3e-07 Score=82.64 Aligned_cols=118 Identities=16% Similarity=0.034 Sum_probs=90.0
Q ss_pred HHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHH-HHHhhhhhhhcccc
Q 038896 49 IGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVF-CGSVVGGNISLRYL 127 (334)
Q Consensus 49 ~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~al~~~ 127 (334)
....+..|...++.+.+ +.....+|+.++.+++.+.....+ .+ ... +.+.+...+..+++. ..+..+++.++++.
T Consensus 141 a~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 216 (260)
T TIGR00950 141 ALGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLG-PN-PQA-LSLQWGALLYLGLIGTALAYFLWNKGLTLV 216 (260)
T ss_pred HHHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcC-CC-CCc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33455778877763333 455666789988888877544322 12 122 345555566566654 78899999999999
Q ss_pred chhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhhe
Q 038896 128 PVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGV 170 (334)
Q Consensus 128 ~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~ 170 (334)
+++.++++.+++|+++.++++++++|+++..++.|..+++.|+
T Consensus 217 ~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 217 DPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999886
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.64 E-value=1.4e-06 Score=79.36 Aligned_cols=137 Identities=13% Similarity=0.141 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHH
Q 038896 184 GFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINS 263 (334)
Q Consensus 184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (334)
-...++..-++|+...++.|..++ .+.++....++-..++.++++|+....+..... .......+..+...|
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~---~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~-----~~~~~~~~~~l~l~g 85 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATS---KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL-----PPLSVSILSKIGLLG 85 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH---CCCCccHHHHHHHHHHHHHHHHHHHHHHHhccc-----CcchHHHHHHHHHHH
Confidence 345677778999999999999885 478999999999999999988887654321110 011111244455556
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHH------hCCccccchhhhHHHHHHHHHHhhh
Q 038896 264 TMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILL------FRNPVTFIGIAGYTMTVLGVAAYGE 328 (334)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~------~~e~~s~~~~~G~~lii~G~~~~~~ 328 (334)
+++..++...++.+++++|...+++.+..|+++.++++++ ++|+++..+++|.++.+.|+.+...
T Consensus 86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 6555555567888999999999999999999999999999 6999999999999999999987553
No 47
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.58 E-value=1.7e-06 Score=76.72 Aligned_cols=63 Identities=16% Similarity=0.226 Sum_probs=58.5
Q ss_pred HHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeee
Q 038896 112 VFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIAS 174 (334)
Q Consensus 112 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~ 174 (334)
.+.++..+.+.|+.+.|.+..+-+.+...++..+++..++|||++++++.|..+.+.|..++.
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 457778899999999999999999999999999999999999999999999999999987665
No 48
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.46 E-value=1.9e-06 Score=64.66 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=59.6
Q ss_pred HHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeee
Q 038896 111 TVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIAS 174 (334)
Q Consensus 111 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~ 174 (334)
+++++...+...+++.+|.+.+..+.++.++++.+.+++++|||++.++++|+.++++|++++.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4467889999999999999999999999999999999999999999999999999999997664
No 49
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.42 E-value=3.1e-06 Score=75.35 Aligned_cols=109 Identities=13% Similarity=0.128 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHH-HHHHhhhhhhhccccchhHHHHHhhhhHHHHHH
Q 038896 67 PIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTV-FCGSVVGGNISLRYLPVSFNQAVGATTPFFTAL 145 (334)
Q Consensus 67 p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~i 145 (334)
+...+.+++.++.+++.+.....+ .+.....+.+.+...+..+++ ..+...+++.++++.+++.++++..++|++.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i 255 (292)
T PRK11272 177 GMMAGAAEMLAAGVVLLIASLLSG-ERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVL 255 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 556677888888887776443222 111112244556666666666 468888999999999999999999999999999
Q ss_pred HHHHHhhcccchhhhhhhhhhhhheeeeecC
Q 038896 146 FAYLMTFKREAWVTYATLVPVVAGVVIASEG 176 (334)
Q Consensus 146 l~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~ 176 (334)
+++++++|+++..+++|.++++.|+.+....
T Consensus 256 ~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 256 LGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999876543
No 50
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.39 E-value=7.5e-06 Score=72.92 Aligned_cols=117 Identities=11% Similarity=0.034 Sum_probs=84.3
Q ss_pred HHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHH-HHHhhhhhhhccccch
Q 038896 51 VLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVF-CGSVVGGNISLRYLPV 129 (334)
Q Consensus 51 ~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~al~~~~~ 129 (334)
..+..|...++ .+ |.... ...+++.+++.+...... + ....+.+.+...+..+++. .+...+++.++++.++
T Consensus 163 ~~v~~r~~~~~--~~-~~~~~-~~~~~~~~~l~~~~~~~~--~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a 235 (293)
T PRK10532 163 YILSGQRAGAE--HG-PATVA-IGSLIAALIFVPIGALQA--G-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPT 235 (293)
T ss_pred HHHHHHHHhcc--CC-chHHH-HHHHHHHHHHHHHHHHcc--C-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 34566666554 44 66654 444555555555333222 1 1112334444445556664 6788899999999999
Q ss_pred hHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeee
Q 038896 130 SFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIAS 174 (334)
Q Consensus 130 ~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~ 174 (334)
+.++++..++|++..++++++++|+++..+++|.+++++|+....
T Consensus 236 ~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 236 RTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred hHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987764
No 51
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.37 E-value=1.1e-05 Score=72.05 Aligned_cols=129 Identities=15% Similarity=0.106 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHH
Q 038896 183 YGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLIN 262 (334)
Q Consensus 183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (334)
.++++++.++++|+...+..|...+ ..+|....++-...+.+++.+.. ..+..+ +... ..++.+
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~----~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~------~~~~---~~~~~~ 67 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSE----SLGPVGGAAMIYSVSGLLLLLTV---GFPRLR------QFPK---RYLLAG 67 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHc----cCChHHHHHHHHHHHHHHHHHHc---cccccc------cccH---HHHHHH
Confidence 4677899999999999999999765 68999999999988888776642 111111 1111 112223
Q ss_pred HHHHHHHHHHHHHHH----hccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 263 STMAYSANLLNFLVT----KHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 263 ~~~~~~~~~~~~~~~----~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
++....+....+... +..++...++..++.|+++.++++++++|+++..+++|+++.+.|+.+..
T Consensus 68 ~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~ 136 (295)
T PRK11689 68 GLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVL 136 (295)
T ss_pred hHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence 333323333333333 46788889999999999999999999999999999999999999987664
No 52
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.37 E-value=1.8e-05 Score=63.25 Aligned_cols=128 Identities=12% Similarity=0.054 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHhhh-----CCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcc---------cC-chHHHHHHHHHH
Q 038896 46 SSNIGVLLLNKYLLSN-----YGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQT---------VK-SRSQLAKIATLS 110 (334)
Q Consensus 46 ~~~~~~~~~~K~~~~~-----~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~---------~~-~~~~~~~~l~~~ 110 (334)
++...-.+..|..+++ .+.+ |..+.......+.+.+.+.....+..+..+ .. +.+.....+..+
T Consensus 10 ~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (153)
T PF03151_consen 10 LFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSG 88 (153)
T ss_pred HHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHH
Confidence 4444445566777776 4666 888888888888888887655544332110 00 235566667777
Q ss_pred HHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeee
Q 038896 111 TVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIAS 174 (334)
Q Consensus 111 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~ 174 (334)
++..+.+...+..++++++-..+++.....+.+.++++++++|+++..++.|+++.+.|+++-.
T Consensus 89 ~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 89 LLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 7778899999999999999999999999999999999999999999999999999999987643
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.36 E-value=2.3e-05 Score=60.39 Aligned_cols=124 Identities=11% Similarity=0.038 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHH
Q 038896 183 YGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLIN 262 (334)
Q Consensus 183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (334)
.|+++.+.+.++.+...++.|+-+++.+ ..+.... . . ..... ..+ + . ..+..
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g----~~~~~~~-~----~-~~~~~-~~~--------------p--~-~~i~l 53 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP----LLSHAWD-F----I-AALLA-FGL--------------A--L-RAVLL 53 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC----CccchhH-H----H-HHHHH-Hhc--------------c--H-HHHHH
Confidence 4778899999999999999998776221 1111100 0 0 00000 000 0 0 01122
Q ss_pred HHHHHHH-HHHHHHHHhccchhHHHHHhhHHHHHHHHHHHH--HhCCccccchhhhHHHHHHHHHHhhhhhhhcC
Q 038896 263 STMAYSA-NLLNFLVTKHTSALTLQVLGNAKGAVAVVISIL--LFRNPVTFIGIAGYTMTVLGVAAYGEAKRRYR 334 (334)
Q Consensus 263 ~~~~~~~-~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~--~~~e~~s~~~~~G~~lii~G~~~~~~~~~~~~ 334 (334)
++..+.. ...+..++++.+...+.....+.++...+.++. ++||++|+.+++|.+++++|+++.++.++++|
T Consensus 54 gl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~~~ 128 (129)
T PRK02971 54 GLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTKAR 128 (129)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 2222222 334677799999999999988888888888875 89999999999999999999999998776654
No 54
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.35 E-value=3.2e-05 Score=66.43 Aligned_cols=142 Identities=11% Similarity=0.058 Sum_probs=110.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHH
Q 038896 181 HLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLL 260 (334)
Q Consensus 181 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (334)
+..|+++++.+-+.|+.--.+.|-+. +.++.++..+-..++...+......... .....+ ....+..+..+.
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~-----~~~~~eIlahRviwS~~~~l~ll~~~r~--~~~~~~-~~~~p~~~~~~~ 76 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLE-----PLPATEILAHRVIWSFPFMLALLFLLRQ--WRELKQ-LLKQPKTLLMLA 76 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHH-HHhCcHHHHHHH
Confidence 45799999999999999999998863 5799999999999999887776555422 111122 223333455555
Q ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 261 INSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
.+++.-..--....|+.++-....+|.--+++|.+.+++|.++++|+++..|++..++..+|+..-.+..
T Consensus 77 l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 77 LTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 5555543333346788999999999999999999999999999999999999999999999998776644
No 55
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.31 E-value=3.5e-05 Score=70.31 Aligned_cols=138 Identities=13% Similarity=0.041 Sum_probs=99.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC-HHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHH
Q 038896 181 HLYGFIMCISATAARAFKSVLQGILLSSEGERLN-SMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLL 259 (334)
Q Consensus 181 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (334)
+..-..+.+.-=.+...++...|..++ ..+ |+.+..++...+.+++.+..... ....++. ......+..+
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~----~~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~----~~~~~~~~~l 117 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN----MLPLPWTISSLQLFVGWLFALLYWATG-FRKIPRI----KSLKLFLKNF 117 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCC----CCHHHHHHHH
Confidence 333334444444455567888898886 467 99999999999987765553321 1000000 0011234556
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 260 LINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
+..|+++...+...+.+++++++...++.....|++++++++++++|+++..+++|.++++.|+.+..
T Consensus 118 lp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 118 LPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 66666666555566788999999999999999999999999999999999999999999999998765
No 56
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.30 E-value=0.00049 Score=61.86 Aligned_cols=225 Identities=14% Similarity=0.047 Sum_probs=142.1
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHH-hhhhHHHHHHHHHHHhhccc---c----hhhhhhhhhhhhhe
Q 038896 99 SRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAV-GATTPFFTALFAYLMTFKRE---A----WVTYATLVPVVAGV 170 (334)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~il~~~~~~e~~---~----~~~~~~v~l~~~G~ 170 (334)
+.+.+...+..|++...++.....+++++.+|...-+ ..++-+...++..++++|=. + ..-.+++++.++|+
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi 148 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV 148 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence 5677888888999999999999999999999887744 47888888888888887632 2 23468888999999
Q ss_pred eeeec----CCC---------cchHHHHHHHHHHHHHHHHHHH-------HHHHHhccCCCCCCHHHHHHHHHH---HHH
Q 038896 171 VIASE----GEP---------GFHLYGFIMCISATAARAFKSV-------LQGILLSSEGERLNSMNLLLYMSP---IAV 227 (334)
Q Consensus 171 ~l~~~----~~~---------~~~~~G~~~~l~a~~~~a~~~v-------~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 227 (334)
++... .|. .....|++.++++.+.++.|.. ..+... +.+.++.....-+.. .+.
T Consensus 149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~---~~g~~~~~~~lp~~~~~~~G~ 225 (345)
T PRK13499 149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA---ALGVDPLYAALPSYVVIMGGG 225 (345)
T ss_pred HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh---hcCCCchHHHHHHHHHHHHHH
Confidence 88875 332 1235799999999999999993 333211 124455433333332 333
Q ss_pred HHHH-HHHHHh--ChhhHHHHHHhhcch----hHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH----HHhhHHHHHH
Q 038896 228 LVLL-PAALIM--EPKVLEVIVSLGRQH----KFLWLLLLINSTMAYSANLLNFLVTKHTSALTLQ----VLGNAKGAVA 296 (334)
Q Consensus 228 i~~~-~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s----~~~~l~~v~~ 296 (334)
++.- ++.... .........+ ...+ ..-...-.+.|+.-+..+..+.+.-++.+..... +...+..+++
T Consensus 226 ~~~n~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viis 304 (345)
T PRK13499 226 AITNLGFCFIRLAKNKDLSLKAD-FSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCG 304 (345)
T ss_pred HHHHHHHHHHHHhhCCCcccchh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHH
Confidence 3222 111110 1111100001 0010 1123344556666666666666666666433222 3446677889
Q ss_pred HHHHHHHhCCccc------cchhhhHHHHHHHHHHhhh
Q 038896 297 VVISILLFRNPVT------FIGIAGYTMTVLGVAAYGE 328 (334)
Q Consensus 297 ~~~~~~~~~e~~s------~~~~~G~~lii~G~~~~~~ 328 (334)
.+.|. +++|.=+ ...++|.++++.|..+...
T Consensus 305 tlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 305 NLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred HHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 99998 4899766 5678999999999887654
No 57
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.21 E-value=3.6e-05 Score=68.79 Aligned_cols=125 Identities=14% Similarity=0.002 Sum_probs=84.8
Q ss_pred HHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccC----CcccCchHHHHHHHHHHHHH-HHHhhhhhhhcc
Q 038896 51 VLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVP----LQTVKSRSQLAKIATLSTVF-CGSVVGGNISLR 125 (334)
Q Consensus 51 ~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~al~ 125 (334)
..+.+|...++++-+.......+..+.+.+.........+... .....+.+.+...+..+++. .+...+++.+++
T Consensus 158 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~ 237 (299)
T PRK11453 158 GNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLG 237 (299)
T ss_pred HHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446666554422222344455555555544333222221110 00112345566666666554 678889999999
Q ss_pred ccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeec
Q 038896 126 YLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASE 175 (334)
Q Consensus 126 ~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~ 175 (334)
+.+++.+..+..++|++..++++++++|+++..+++|.+++++|+.+...
T Consensus 238 ~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 238 RYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999977654
No 58
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.21 E-value=1e-05 Score=72.35 Aligned_cols=126 Identities=9% Similarity=-0.064 Sum_probs=87.5
Q ss_pred HHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCccc---------CchHHHHHHHHHHH-HHHHHhh
Q 038896 49 IGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTV---------KSRSQLAKIATLST-VFCGSVV 118 (334)
Q Consensus 49 ~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~~-~~~~~~~ 118 (334)
....+..|...++.+++ |..++.+++..+.+.+.+.....+..+.... .....+...+..++ ++...+.
T Consensus 158 a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
T TIGR00817 158 VSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQ 236 (302)
T ss_pred HHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHH
Confidence 33455667777633466 8899999999998888875543322111000 00001111222222 2333445
Q ss_pred hhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeec
Q 038896 119 GGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASE 175 (334)
Q Consensus 119 ~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~ 175 (334)
+.+.+++++++..+++...+.|+++.++++++++|+++..+++|.++++.|+.+...
T Consensus 237 ~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 237 VAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 667899999999999999999999999999999999999999999999999977653
No 59
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.19 E-value=9.8e-05 Score=55.77 Aligned_cols=72 Identities=15% Similarity=0.219 Sum_probs=59.4
Q ss_pred HHHHHHHHH-HHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhh
Q 038896 259 LLINSTMAY-SANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKR 331 (334)
Q Consensus 259 ~~~~~~~~~-~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~ 331 (334)
.+..|+++. ......+++.++.++ ..+....+.|+++.++++++++|+++..+++|.++++.|+.+..+...
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 344344443 445557788999995 788999999999999999999999999999999999999999887653
No 60
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.96 E-value=0.00016 Score=64.19 Aligned_cols=132 Identities=11% Similarity=0.058 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHH
Q 038896 184 GFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINS 263 (334)
Q Consensus 184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (334)
|++++++++++|+...+..|+.. +.++.+.. ....+.++..........+. ...+..+..-+.+|
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-----g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--------~~~~~~~~~g~l~G 66 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-----GGPYSQTL--GTTFGALILSIAIAIFVLPE--------FWALSIFLVGLLSG 66 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-----CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--------ccccHHHHHHHHHH
Confidence 67899999999999999999862 44555554 24444444444333322111 11233455556666
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhh-HHHHHHHHHHHHHhCCccccch----hhhHHHHHHHHHHhhhhh
Q 038896 264 TMAYSANLLNFLVTKHTSALTLQVLGN-AKGAVAVVISILLFRNPVTFIG----IAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~a~~~s~~~~-l~~v~~~~~~~~~~~e~~s~~~----~~G~~lii~G~~~~~~~~ 330 (334)
+.-...|..++.++++.+....-.+.+ +.++.+.+.+.++++|+.+..+ ++|.++++.|+.+....+
T Consensus 67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~ 138 (290)
T TIGR00776 67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK 138 (290)
T ss_pred HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence 666666788888999999888877766 8888999999999999999999 999999999999876554
No 61
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.81 E-value=0.00025 Score=53.22 Aligned_cols=56 Identities=16% Similarity=0.183 Sum_probs=51.0
Q ss_pred HHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 272 LNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 272 ~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
....++++.+.......-.+.++.+.++|++++||++|+.+++|.++++.|+.+..
T Consensus 53 ~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 53 LWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 35666899999999999999999999999999999999999999999999998754
No 62
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.76 E-value=6.4e-05 Score=57.92 Aligned_cols=72 Identities=17% Similarity=0.047 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHH--HhhcccchhhhhhhhhhhhheeeeecC
Q 038896 105 KIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYL--MTFKREAWVTYATLVPVVAGVVIASEG 176 (334)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~--~~~e~~~~~~~~~v~l~~~G~~l~~~~ 176 (334)
.....-++++++..+++.+++..|++.+.-+.+..++++.+.++. +++|+++..+++|++++++|++++..+
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 344445567899999999999999999999999999999888885 799999999999999999999887654
No 63
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.73 E-value=0.00086 Score=60.04 Aligned_cols=128 Identities=14% Similarity=0.089 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 038896 194 ARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLLN 273 (334)
Q Consensus 194 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (334)
++..+.+.++++.++...+..+..+++.+.....+...+......... .+..+ +.-....++.........
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~ 81 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK-------SRKIP--LKKYAILSFLFFLASVLS 81 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC-------CCcCh--HHHHHHHHHHHHHHHHHH
Confidence 334467888888874333225778888888887777666554433111 01111 223333445555556677
Q ss_pred HHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 274 FLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 274 ~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
+.++++.+-.+..+....+++..++++.++++++.+..++++.+++.+|+.+....+
T Consensus 82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~ 138 (303)
T PF08449_consen 82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSD 138 (303)
T ss_pred HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecc
Confidence 888999999999999999999999999999999999999999999999999987654
No 64
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.72 E-value=0.00032 Score=61.14 Aligned_cols=65 Identities=14% Similarity=0.154 Sum_probs=60.0
Q ss_pred HHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecC
Q 038896 112 VFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEG 176 (334)
Q Consensus 112 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~ 176 (334)
...++-...+.|+.+.|.+..+-+.+++.+...+++..++|||++....+|..+.++|-.+++..
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 35788889999999999999999999999999999999999999999999999999999777643
No 65
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.70 E-value=0.0018 Score=57.17 Aligned_cols=140 Identities=21% Similarity=0.168 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHH
Q 038896 181 HLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLL 260 (334)
Q Consensus 181 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (334)
...+....+..++.++......|...+ + ..+...........+.+...+.... +. . ... .... ..+...+
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~-~~~--~~~~-~~~~~~~ 74 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVE--S-LDPFLFAAALRFLIAALLLLPLLLL-EP--R-GLR--PALR-PWLLLLL 74 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--c-cCChHHHHHHHHHHHHHHHHHHHHh-hc--c-ccc--cccc-chHHHHH
Confidence 346778888888999999888888754 2 2455555555666555552222211 11 0 000 0011 1234455
Q ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHH-HHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 261 INSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISI-LLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~-~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
..++.........+.+++++++.......+..|++..+++. ++++|+++..++.|..+.+.|+.+.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~ 145 (292)
T COG0697 75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGG 145 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCC
Confidence 55555555566678889999999999999999999999997 66799999999999999999999887654
No 66
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.62 E-value=0.0021 Score=50.23 Aligned_cols=130 Identities=18% Similarity=0.209 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCC-CHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHH
Q 038896 185 FIMCISATAARAFKSVLQGILLSSEGERL-NSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINS 263 (334)
Q Consensus 185 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (334)
.++++.+...-+.+..+..++.+ +. ||+.....+...+.+.+.......+..+.+. .... -++...+|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~----~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~---~~~~----p~w~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGK----ALGSPLVASFISFGVGFILLLIILLITGRPSLAS---LSSV----PWWAYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HhCccHHHHHHHHHHHHHHHHHHHHHhcccccch---hccC----ChHHhccH
Confidence 46788888999999999888865 33 5999999999999999888877776542221 1111 12333478
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhhH-HHHHHHHHHHH-H---hCCccccchhhhHHHHHHHHHH
Q 038896 264 TMAYSANLLNFLVTKHTSALTLQVLGNA-KGAVAVVISIL-L---FRNPVTFIGIAGYTMTVLGVAA 325 (334)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~a~~~s~~~~l-~~v~~~~~~~~-~---~~e~~s~~~~~G~~lii~G~~~ 325 (334)
+++..+-.+....+++.++......... +-+.+.++|.+ . -++++++.+++|.+++++|+.+
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 8888777777888999999888877665 44556666664 2 2467899999999999999863
No 67
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.58 E-value=1.3e-05 Score=66.87 Aligned_cols=243 Identities=16% Similarity=0.147 Sum_probs=160.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHh-hhhHHHHHH
Q 038896 67 PIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVG-ATTPFFTAL 145 (334)
Q Consensus 67 p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~i 145 (334)
|...+..-.+-+.++...+... .. +..+...+..-+..|++...++...+-|.++++++.+.-+. ..+-+-+.+
T Consensus 28 p~qQ~lGtT~GALifaiiv~~~--~~---p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL 102 (288)
T COG4975 28 PYQQTLGTTLGALIFAIIVFLF--VS---PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSL 102 (288)
T ss_pred hhHhhhhccHHHHHHHHHHhee--ec---CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhcee
Confidence 7777766666666666653332 12 22356677777888888899999999999999988876544 567778888
Q ss_pred HHHHHhhcccchhh----hhhhhhhhhheeeeecCCC--------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 038896 146 FAYLMTFKREAWVT----YATLVPVVAGVVIASEGEP--------GFHLYGFIMCISATAARAFKSVLQGILLSSEGERL 213 (334)
Q Consensus 146 l~~~~~~e~~~~~~----~~~v~l~~~G~~l~~~~~~--------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~ 213 (334)
++.+.++|=.+..+ .+++++.+.|+.+.+..|. +....|....+.+.+.|-.|.+..+.. +.
T Consensus 103 ~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f------~v 176 (288)
T COG4975 103 FGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF------DV 176 (288)
T ss_pred eeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc------cc
Confidence 99999999665555 4678899999999987552 112468888889999999999988775 24
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHH
Q 038896 214 NSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKG 293 (334)
Q Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~ 293 (334)
|.+....-+..-..+..+.+...-+....+.. .+.-...|++-...|..++.+.++.+-.+.=.+..+.-
T Consensus 177 ~g~saiLPqAiGMv~~ali~~~~~~~~~~~K~----------t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgV 246 (288)
T COG4975 177 DGLSAILPQAIGMVIGALILGFFKMEKRFNKY----------TWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGV 246 (288)
T ss_pred cchhhhhHHHHHHHHHHHHHhhcccccchHHH----------HHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhhee
Confidence 55544444333332222233322221111111 12223334444455666666666665544444556667
Q ss_pred HHHHHHHHHHhCCccccch----hhhHHHHHHHHHHhhhhh
Q 038896 294 AVAVVISILLFRNPVTFIG----IAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 294 v~~~~~~~~~~~e~~s~~~----~~G~~lii~G~~~~~~~~ 330 (334)
+.+++-+.++++|+=|..+ +.|+++++.|..+....|
T Consensus 247 iisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~K 287 (288)
T COG4975 247 IISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIAK 287 (288)
T ss_pred eeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhheec
Confidence 8899999999999988875 467788888877655443
No 68
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.47 E-value=0.00024 Score=53.75 Aligned_cols=70 Identities=17% Similarity=0.220 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhhhhhhhccccchhHHHHHh-hhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeec
Q 038896 106 IATLSTVFCGSVVGGNISLRYLPVSFNQAVG-ATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASE 175 (334)
Q Consensus 106 ~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~ 175 (334)
....-++++++..+...+++++|.+.+..+- ....+.+.+.++++++|+++..+++++.+++.|++.+..
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 3455666788999999999999999988774 799999999999999999999999999999999987754
No 69
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.45 E-value=0.005 Score=55.39 Aligned_cols=139 Identities=14% Similarity=0.205 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHH
Q 038896 183 YGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLIN 262 (334)
Q Consensus 183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (334)
.+.+++-.-+++-+...+....+.++ +.+. |...++++...-.++..+......+. +.+....... ++..+..
T Consensus 13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~-P~~Qs~~~Y~~l~~vy~~~~~~r~~~--~~~~~~~~~~---~w~y~ll 85 (334)
T PF06027_consen 13 IVLLLGQVLSLCITGTGTFSSLLANK-GVNI-PTFQSFFNYVLLALVYTPILLYRRGF--KKWLKVLKRP---WWKYFLL 85 (334)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhc-CccC-cHHHHHHHHHHHHHHHhhhhhhcccc--ccchhhcchh---HHHHHHH
Confidence 45566666666667777777776552 2233 44444444444444444443333221 1111111111 3333344
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhh
Q 038896 263 STMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGE 328 (334)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~ 328 (334)
+++=...|+....+.++++.+...++.....+++.++++++++++.++.+++|+.+++.|+.+...
T Consensus 86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~ 151 (334)
T PF06027_consen 86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVV 151 (334)
T ss_pred HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheee
Confidence 677777888889999999999999999999999999999999999999999999999999887654
No 70
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.30 E-value=0.00066 Score=50.65 Aligned_cols=68 Identities=16% Similarity=0.238 Sum_probs=59.7
Q ss_pred HHHHHHHHHhhhhhhhccccchhHHHHH-hhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeec
Q 038896 108 TLSTVFCGSVVGGNISLRYLPVSFNQAV-GATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASE 175 (334)
Q Consensus 108 ~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~ 175 (334)
..-+++.++..+...+++.+|.+.+..+ .....+.+.+.+++++||+++..+++++.+++.|++.+..
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3455667888888999999999998877 5688999999999999999999999999999999988754
No 71
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.27 E-value=0.0045 Score=52.26 Aligned_cols=117 Identities=14% Similarity=0.017 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHH-HHHhhhhhhhcccc
Q 038896 49 IGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVF-CGSVVGGNISLRYL 127 (334)
Q Consensus 49 ~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~al~~~ 127 (334)
....+..|.+-+. -+ .-.-+..-+.++.++..++-.... -..+.+.+.....+..+++. .+...+...+++.+
T Consensus 161 a~YIv~G~r~g~~--~~-g~~g~a~gm~vAaviv~Pig~~~a---g~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rl 234 (292)
T COG5006 161 ALYIVLGQRAGRA--EH-GTAGVAVGMLVAALIVLPIGAAQA---GPALFSPSLLPLALGVAVLSSALPYSLEMIALRRL 234 (292)
T ss_pred HHHHHHcchhccc--CC-CchHHHHHHHHHHHHHhhhhhhhc---chhhcChHHHHHHHHHHHHhcccchHHHHHHHhhC
Confidence 3344455555432 22 223344667777777777433111 12233556666666777776 67788999999999
Q ss_pred chhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhhee
Q 038896 128 PVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVV 171 (334)
Q Consensus 128 ~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~ 171 (334)
|...+.++.+++|.+..+.++++++|+++..||.++..++.+.+
T Consensus 235 p~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 235 PARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred ChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999988776654
No 72
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.22 E-value=0.0098 Score=44.39 Aligned_cols=57 Identities=11% Similarity=0.068 Sum_probs=46.9
Q ss_pred HHHHhccchh-HHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 274 FLVTKHTSAL-TLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 274 ~~~~~~~~a~-~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
..++++.+.. ..++..-+..+..++.++++|||++|+.+++|+.+++.|+...+..+
T Consensus 48 ~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 48 AQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 4446666644 34556667889999999999999999999999999999999988654
No 73
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.17 E-value=0.0015 Score=48.31 Aligned_cols=69 Identities=17% Similarity=0.078 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhhhhhhhccccchhHHHHHh-hhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeee
Q 038896 106 IATLSTVFCGSVVGGNISLRYLPVSFNQAVG-ATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIAS 174 (334)
Q Consensus 106 ~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~ 174 (334)
.+..-+++..+..+...+++.+|.+.+..+- ....+.+.+.+++++||+++..+++++.+++.|++.+.
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3344556788888999999999998877554 58889999999999999999999999999999998764
No 74
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.13 E-value=0.0016 Score=48.38 Aligned_cols=68 Identities=13% Similarity=0.033 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhhhhhhccccchhHHHHHh-hhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeee
Q 038896 106 IATLSTVFCGSVVGGNISLRYLPVSFNQAVG-ATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIA 173 (334)
Q Consensus 106 ~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~ 173 (334)
....-+++.++..+...+++++|.+.+..+- ....+.+.+.+.+++||+++..+++++.+++.|++.+
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 4444556678888889999999999877554 5788899999999999999999999999999998764
No 75
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.11 E-value=0.0029 Score=54.59 Aligned_cols=75 Identities=21% Similarity=0.198 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 256 WLLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
......-+++....|...+.++++.+|.+..+....|.+++.++++++++++++..||++..+...|+.+.+...
T Consensus 17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~ 91 (244)
T PF04142_consen 17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS 91 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence 445556677777888888999999999999999999999999999999999999999999999999999887543
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.07 E-value=0.026 Score=41.97 Aligned_cols=53 Identities=15% Similarity=0.205 Sum_probs=44.5
Q ss_pred HHHhccch-hHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 275 LVTKHTSA-LTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 275 ~~~~~~~a-~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
.++|+.+. ...++..-+..+...+.++++|||++|+.+++|+++++.|+...+
T Consensus 54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 34566654 345777778889999999999999999999999999999998765
No 77
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=97.07 E-value=0.046 Score=48.72 Aligned_cols=143 Identities=17% Similarity=0.085 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHH----hhcchhHHHHHHHH
Q 038896 186 IMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVS----LGRQHKFLWLLLLI 261 (334)
Q Consensus 186 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 261 (334)
+..+...+-.+......|+..++++.+..|....+..-..-.+++....+..+......... .....+.-..-+..
T Consensus 18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v 97 (345)
T KOG2234|consen 18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV 97 (345)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence 34444455556666666766554455678888888888887777766655443220011110 01111212344555
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhh
Q 038896 262 NSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGE 328 (334)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~ 328 (334)
-+.+....|...+....+.+|.+..+...+|...+.++..++++++++..||...++...|+.+.+.
T Consensus 98 Pa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~ 164 (345)
T KOG2234|consen 98 PALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL 164 (345)
T ss_pred HHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 5666667777788899999999999999999999999999999999999999999999999998873
No 78
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.04 E-value=0.0062 Score=52.74 Aligned_cols=101 Identities=9% Similarity=-0.021 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHH
Q 038896 67 PIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALF 146 (334)
Q Consensus 67 p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il 146 (334)
|+...+-|.+.-.+...++.. .. +++..+++ .+.-+..|+++..++.++..+.+...++.+..+..+.++...+-
T Consensus 164 ~~~~~lPqaiGm~i~a~i~~~-~~---~~~~~~k~-~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlg 238 (269)
T PF06800_consen 164 GWSAFLPQAIGMLIGAFIFNL-FS---KKPFFEKK-SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLG 238 (269)
T ss_pred hhHhHHHHHHHHHHHHHHHhh-cc---cccccccc-hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhh
Confidence 666666665444443333222 12 12222344 45556679999999999999999999999999999999999999
Q ss_pred HHHHhhcccchhhh----hhhhhhhhheee
Q 038896 147 AYLMTFKREAWVTY----ATLVPVVAGVVI 172 (334)
Q Consensus 147 ~~~~~~e~~~~~~~----~~v~l~~~G~~l 172 (334)
+.+++||+=+++++ +++++++.|.++
T Consensus 239 GI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 239 GIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 99999998887764 455566666543
No 79
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.01 E-value=0.025 Score=42.86 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=46.1
Q ss_pred HHHHhccchhH-HHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 274 FLVTKHTSALT-LQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 274 ~~~~~~~~a~~-~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
..++++.+... .++..-+..+...++++++|||++|+.+++|+++++.|+...+...
T Consensus 48 s~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 48 SFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 44466665443 4555667889999999999999999999999999999999887643
No 80
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.96 E-value=0.0016 Score=47.67 Aligned_cols=69 Identities=16% Similarity=0.058 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhhhhhhhccccchhHHH-HHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeee
Q 038896 106 IATLSTVFCGSVVGGNISLRYLPVSFNQ-AVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIAS 174 (334)
Q Consensus 106 ~l~~~~~~~~~~~~~~~al~~~~~~~~~-~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~ 174 (334)
....-+++..+..+...+++++|.+.+. +-.....+.+.+.++++++|+.+..+++++.++++|++.+.
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 3444556678888888999999988876 44577888899999999999999999999999999997664
No 81
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.88 E-value=0.03 Score=41.09 Aligned_cols=56 Identities=16% Similarity=0.294 Sum_probs=47.4
Q ss_pred HHHhccch-hHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhh
Q 038896 275 LVTKHTSA-LTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 275 ~~~~~~~a-~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
.++|+.+- +..++..-+-.+...+.++++|+|++|+.+++|+.++++|+...+...
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 34677664 346788888999999999999999999999999999999999877643
No 82
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.82 E-value=0.0094 Score=53.06 Aligned_cols=117 Identities=17% Similarity=0.196 Sum_probs=79.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHH
Q 038896 181 HLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLL 260 (334)
Q Consensus 181 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (334)
...|..+++.++++.+...+++|+-..+.+++ ...-. .. +..... .+..|..++
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~--~~~~~--~~--------~~~~l~--------------~~~W~~G~~ 58 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRG--SLRAG--SG--------GRSYLR--------------RPLWWIGLL 58 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccccc--ch--------hhHHHh--------------hHHHHHHHH
Confidence 45799999999999999999999976533221 00000 00 000000 011122222
Q ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 261 INSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
.. ..+.. ..+.+....++...+.++.+..++..+++..+++|+++..++.|.++++.|..+..
T Consensus 59 ~~-~~g~~---~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LM-VLGEI---LNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HH-hcchH---HHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 22 22222 33456788899999999999999999999999999999999999999999987643
No 83
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.80 E-value=0.04 Score=40.73 Aligned_cols=56 Identities=13% Similarity=0.135 Sum_probs=46.8
Q ss_pred HHHHhccch-hHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhh
Q 038896 274 FLVTKHTSA-LTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEA 329 (334)
Q Consensus 274 ~~~~~~~~a-~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~ 329 (334)
..++|+.+. ...++..-+..+...+.++++|||++|+.+++|+.+++.|+...+..
T Consensus 47 s~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 47 AWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 334566654 45678888899999999999999999999999999999999987643
No 84
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.75 E-value=0.006 Score=44.19 Aligned_cols=58 Identities=14% Similarity=0.020 Sum_probs=35.6
Q ss_pred HHHHHHHHhhhhhhhccccchhHHHHH-hhhhHHHHHHHHHHHhhcccchhhhhhhhhh
Q 038896 109 LSTVFCGSVVGGNISLRYLPVSFNQAV-GATTPFFTALFAYLMTFKREAWVTYATLVPV 166 (334)
Q Consensus 109 ~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~ 166 (334)
.-.+++.+..+...+++++|.+.+.-+ .....+.+.+.+.+++||+++..+++++.++
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 344678888999999999999998655 5699999999999999999999999998763
No 85
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.65 E-value=0.061 Score=48.58 Aligned_cols=136 Identities=12% Similarity=0.055 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHH--HHHH--HHHhChhhHHHHHHhhcchhHHHH
Q 038896 182 LYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLV--LLPA--ALIMEPKVLEVIVSLGRQHKFLWL 257 (334)
Q Consensus 182 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 257 (334)
..|+++++++++|++.+.+-+|+. | ..+++.. |- ..+.+. +.|+ ..+.. +++.+.. ...+...+.
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~~-k-----~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~-~~f~~~~--~~~~~~~~~ 74 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKKV-K-----KWSWETM-WS-VGGIFSWLILPWLIAALLL-PDFWAYY--SSFSGSTLL 74 (345)
T ss_pred HHHHHHHHHHHHHhhccccccccc-C-----CCchhHH-HH-HHHHHHHHHHHHHHHHHHh-hhHHHHH--HhcCHHHHH
Confidence 469999999999999999998883 2 2454544 32 222211 1121 11111 1221111 223344566
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchhH-HHHHhhHHHHHHHHHHHHHhCCcc---c----cchhhhHHHHHHHHHHhhh
Q 038896 258 LLLINSTMAYSANLLNFLVTKHTSALT-LQVLGNAKGAVAVVISILLFRNPV---T----FIGIAGYTMTVLGVAAYGE 328 (334)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~a~~-~s~~~~l~~v~~~~~~~~~~~e~~---s----~~~~~G~~lii~G~~~~~~ 328 (334)
.-+++|++-...|...+..+++.+-+. ..+..-+..+.+++++.+++||=. + ...++|.+++++|+.+..+
T Consensus 75 ~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 75 PVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 677777776666777777788776543 344455678889999999998632 2 2478899999999999887
No 86
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.56 E-value=0.05 Score=46.26 Aligned_cols=67 Identities=12% Similarity=0.050 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheee
Q 038896 106 IATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVI 172 (334)
Q Consensus 106 ~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l 172 (334)
.....+.......+....+++.+....++...+.++++.+++.++++|+++..+++|..+++.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3344455677778888999999999999999999999999999999999999999999999998764
No 87
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.51 E-value=0.11 Score=40.68 Aligned_cols=140 Identities=16% Similarity=0.079 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHH
Q 038896 182 LYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLI 261 (334)
Q Consensus 182 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (334)
....++++.+..+-..+.-...|+.+ . .-+|..-...+...+.+.+.......+........ ... .++...
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~--~-~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~---~~~---pwW~~~ 74 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLAR--Y-LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAV---ASA---PWWAWI 74 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHH--H-cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhc---cCC---chHHHH
Confidence 34567888888999999999888866 2 12688888888888888887776665433222211 111 123334
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHhhH-HHHHHHHHHHHHhC----CccccchhhhHHHHHHHHHHhhhhh
Q 038896 262 NSTMAYSANLLNFLVTKHTSALTLQVLGNA-KGAVAVVISILLFR----NPVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l-~~v~~~~~~~~~~~----e~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
+|+++..+-........+.++.+.-.+... +-+.+.++|-+=.. .+++...++|++++++|+++.++.+
T Consensus 75 GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 75 GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 446665555556666788887766555443 44555555554432 4789999999999999966655443
No 88
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.49 E-value=0.08 Score=41.35 Aligned_cols=117 Identities=14% Similarity=0.043 Sum_probs=83.0
Q ss_pred HHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhH
Q 038896 52 LLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSF 131 (334)
Q Consensus 52 ~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~ 131 (334)
..+|-.+-+. ...|+.-++..+..+.+.+..+....+....+.. ++.-++....|++......+.......++++.
T Consensus 17 ~~~N~~L~~~--~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~--~~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~ 92 (138)
T PF04657_consen 17 AAFNGQLGKA--LGSPLVASFISFGVGFILLLIILLITGRPSLASL--SSVPWWAYLGGLLGVFFVLSNIILVPRLGAAL 92 (138)
T ss_pred HHHHHHHHHH--hCccHHHHHHHHHHHHHHHHHHHHHhcccccchh--ccCChHHhccHHHHHHHHHHHHHHhhhhhHHH
Confidence 3455555554 2349999999999999998886665554322222 23334444488888888999999999999888
Q ss_pred HHHHh-hhhHHHHHHHHHH----Hhhcccchhhhhhhhhhhhheee
Q 038896 132 NQAVG-ATTPFFTALFAYL----MTFKREAWVTYATLVPVVAGVVI 172 (334)
Q Consensus 132 ~~~l~-~~~pi~~~il~~~----~~~e~~~~~~~~~v~l~~~G~~l 172 (334)
.+.+. .-+-+...+++.+ .-|++++..|.+++++.+.|+.+
T Consensus 93 ~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 93 TTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 87666 4455555566664 34788999999999999999763
No 89
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.24 E-value=0.053 Score=47.22 Aligned_cols=137 Identities=9% Similarity=-0.013 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCC-cc--cCchHHHHHHHHHHH
Q 038896 35 LFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPL-QT--VKSRSQLAKIATLST 111 (334)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~-~~--~~~~~~~~~~l~~~~ 111 (334)
.-...++..+..+-...+-.++.+++.++.. ++.+.+.-.++.++.-.....-.+.... -. -..++.++.++..++
T Consensus 171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~ 249 (327)
T KOG1581|consen 171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST 249 (327)
T ss_pred hHhHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence 4556777788888888888999999987766 6666666555555554443221221110 00 115678999999999
Q ss_pred HHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheee
Q 038896 112 VFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVI 172 (334)
Q Consensus 112 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l 172 (334)
+.+.++.+.++-++.-.+=..+++..+-=+++.+++.+.++.+.+..+|+++...+.|..+
T Consensus 250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 9999999999999998888888999999999999999999999999999999988877643
No 90
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.83 E-value=0.019 Score=42.78 Aligned_cols=71 Identities=18% Similarity=0.144 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHh-hhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeee
Q 038896 102 QLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVG-ATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIA 173 (334)
Q Consensus 102 ~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~ 173 (334)
.++..+|.. ++-.+...+++.+...+.|.+.-+. +++=++|.+.++++.+|..++++++|+.+++.|+.+.
T Consensus 41 n~~y~ipf~-lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 41 NPKYIIPFL-LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred hHHHHHHHH-HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 345555443 3456677788889999999988774 9999999999998888888999999999999999875
No 91
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=95.74 E-value=0.0035 Score=53.34 Aligned_cols=133 Identities=15% Similarity=0.200 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHH
Q 038896 183 YGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLIN 262 (334)
Q Consensus 183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (334)
.|..+.-++ ..+-...+..++... .+|.+..-.-.+.-.+...|..+....+.+. ...--..+++=
T Consensus 38 ~gl~l~~vs-~ff~~~~vv~t~~~e-----~~p~e~a~~r~l~~mlit~pcliy~~~~v~g--------p~g~R~~LiLR 103 (346)
T KOG4510|consen 38 LGLLLLTVS-YFFNSCMVVSTKVLE-----NDPMELASFRLLVRMLITYPCLIYYMQPVIG--------PEGKRKWLILR 103 (346)
T ss_pred cCceehhhH-HHHhhHHHhhhhhhc-----cChhHhhhhhhhhehhhhheEEEEEeeeeec--------CCCcEEEEEee
Confidence 566666666 666666677766553 3455444333232222222222211111000 00001223344
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhh
Q 038896 263 STMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEA 329 (334)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~ 329 (334)
|+.++..-+..|++.++.+-..+.+.....|+++.++++.+++|+.|..+.+|..+.+.|+.+..+.
T Consensus 104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRP 170 (346)
T KOG4510|consen 104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRP 170 (346)
T ss_pred hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecC
Confidence 5556655566788899999999999999999999999999999999999999999999999887653
No 92
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.58 E-value=0.14 Score=36.90 Aligned_cols=47 Identities=11% Similarity=0.097 Sum_probs=26.1
Q ss_pred HHHHHhccchhHH-HHHhhHHHHHHHHHHHHHhCCccccchhhhHHHH
Q 038896 273 NFLVTKHTSALTL-QVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMT 319 (334)
Q Consensus 273 ~~~~~~~~~a~~~-s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li 319 (334)
...++++.+.... .+..-+..+...+.|+++|||++|+.+++|+.++
T Consensus 46 l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 46 LSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3456788776655 6667788899999999999999999999999875
No 93
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=95.33 E-value=0.028 Score=50.05 Aligned_cols=140 Identities=11% Similarity=0.030 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhh--hCCCCchHHHHHHHHHHHHHHHH-HHHHHHhccCC---cccCchHHHHHHH
Q 038896 34 TLFILSLVLLWYSSNIGVLLLNKYLLS--NYGFRFPIFLTMCHMSACAILSY-VSIVFLKIVPL---QTVKSRSQLAKIA 107 (334)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~K~~~~--~~~~~~p~~l~~~r~~~~~l~~~-~~~~~~~~~~~---~~~~~~~~~~~~l 107 (334)
.+........+.+....-.++.|.+++ .++.+ ++.+...+.-++.+.+. |.......... ....+.-.....+
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHH
Confidence 344455555555555556667777774 35577 88888888877777777 64332221111 1101122234444
Q ss_pred HHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeee
Q 038896 108 TLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIAS 174 (334)
Q Consensus 108 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~ 174 (334)
..+++..+.+...+..+..+++=++++.....-+++.+.++.+++|+.+..+.+|..+.++|+.+-.
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 4446666777888888889888888888888888888888888888888999999999988887654
No 94
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.02 E-value=1.3 Score=34.89 Aligned_cols=118 Identities=13% Similarity=0.004 Sum_probs=75.6
Q ss_pred HHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhH
Q 038896 52 LLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSF 131 (334)
Q Consensus 52 ~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~ 131 (334)
.-+|-.+-+. .+.|..-.+..+.++.+++..+.....+.+.... .++.-++....|++..............+.++.
T Consensus 21 ~~iN~qL~~~--~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~-~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~ 97 (150)
T COG3238 21 AAINGRLARY--LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAA-VASAPWWAWIGGLLGAIFVTSSILLAPRLGAAT 97 (150)
T ss_pred HHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhh-ccCCchHHHHccchhhhhhhhhHHhccchhHHH
Confidence 3455555444 3459999999999999988886665333332221 233344445556666666666666666666555
Q ss_pred HHH-HhhhhHHHHHHHHHHHh----hcccchhhhhhhhhhhhheee
Q 038896 132 NQA-VGATTPFFTALFAYLMT----FKREAWVTYATLVPVVAGVVI 172 (334)
Q Consensus 132 ~~~-l~~~~pi~~~il~~~~~----~e~~~~~~~~~v~l~~~G~~l 172 (334)
.+. +..-+-+..+++..+=. +++++..+++++++.++|+.+
T Consensus 98 t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~ 143 (150)
T COG3238 98 TIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILL 143 (150)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHH
Confidence 544 44556666666665432 578999999999999999443
No 95
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=93.73 E-value=0.11 Score=46.67 Aligned_cols=75 Identities=15% Similarity=0.154 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhhhh
Q 038896 257 LLLLINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEAKR 331 (334)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~~~ 331 (334)
..-+.-|.+-+..++....++++++.....++.+....++.+++.++-+|++|+.++++..+.+.|+++.+..+.
T Consensus 160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s 234 (416)
T KOG2765|consen 160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS 234 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence 344445666677777778888999999999999999999999999999999999999999999999998887643
No 96
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=93.36 E-value=0.85 Score=34.08 Aligned_cols=52 Identities=15% Similarity=0.120 Sum_probs=39.7
Q ss_pred HHHHhccchhHHHHH-hhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHH
Q 038896 274 FLVTKHTSALTLQVL-GNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAA 325 (334)
Q Consensus 274 ~~~~~~~~a~~~s~~-~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~ 325 (334)
++.+++.+-+.+... +.+.-+++.+.++++..|..+...++|+++++.|+.+
T Consensus 59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 444566554444444 6778899999998888888899999999999999764
No 97
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=93.33 E-value=0.18 Score=43.59 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHHHHHH
Q 038896 184 GFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLLLINS 263 (334)
Q Consensus 184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (334)
|++.+++|+++++...|=.|+. + ..|++..+.++.....+......+..+.+. +..+-+++|
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~----~-~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~-------------f~p~amlgG 62 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF----D-TGDGFFFQWVMCSGIFLVGLVVNLILGFPP-------------FYPWAMLGG 62 (254)
T ss_pred CchhHHHHHHHhcccceeeEec----c-CCCcHHHHHHHHHHHHHHHHHHHHhcCCCc-------------ceeHHHhhh
Confidence 5677889999999888888874 2 347878777777666665555544443322 233444555
Q ss_pred HHHHHHHHHHHHHHhccch-hHHHHHhhHHHHHHHHHHHH-HhCCc-----cccchhhhHHHHHHHHHHhhhhh
Q 038896 264 TMAYSANLLNFLVTKHTSA-LTLQVLGNAKGAVAVVISIL-LFRNP-----VTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~a-~~~s~~~~l~~v~~~~~~~~-~~~e~-----~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
.+-...|....-.++..+- .-..+.+..+-+.+...+-+ +||++ -.+.+++|.+++++|..+|...|
T Consensus 63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeec
Confidence 5544445555555666552 23345555566666666644 56543 35579999999999999997644
No 98
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.11 E-value=0.47 Score=41.84 Aligned_cols=135 Identities=14% Similarity=0.034 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhccC-----CcccCchHHHHHHHHHHHHH
Q 038896 39 SLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVFLKIVP-----LQTVKSRSQLAKIATLSTVF 113 (334)
Q Consensus 39 ~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~ 113 (334)
..+...........+..|.-+++.+++ -+.+.+...+.....+.......+..+ .+...+...+..+...+++.
T Consensus 160 ~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~g 238 (314)
T KOG1444|consen 160 SWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMG 238 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHH
Confidence 334444555666667778887776665 666777788877777776554454322 11122344456666666666
Q ss_pred HHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeee
Q 038896 114 CGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIAS 174 (334)
Q Consensus 114 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~ 174 (334)
.+-.++..++.+..|+...++.....-..+.+-..++.+++.++...+|+.+.++|.++-.
T Consensus 239 f~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 239 FGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 7778889999999999999988866666666666666777888888777777777766554
No 99
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=92.80 E-value=5.1 Score=36.02 Aligned_cols=140 Identities=14% Similarity=0.078 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH-HHHhChhhHHHHHHhhcchhHHHHHHH
Q 038896 182 LYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPA-ALIMEPKVLEVIVSLGRQHKFLWLLLL 260 (334)
Q Consensus 182 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (334)
..|+++..+++++.+.+.+=.||. +-..++.......+-.-+..|. .....-++..+.....+.+ .+....
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv------k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~--~l~~~~ 77 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV------KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPAS--TLFWTF 77 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc------CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChh--HHHHHH
Confidence 469999999999999999999886 3366665544433333333443 3333444444443322222 122223
Q ss_pred HHHHHHHHHHHHHHHHHhccc-hhHHHHHhhHHHHHHHHHHHHHhC-------CccccchhhhHHHHHHHHHHhhhh
Q 038896 261 INSTMAYSANLLNFLVTKHTS-ALTLQVLGNAKGAVAVVISILLFR-------NPVTFIGIAGYTMTVLGVAAYGEA 329 (334)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~-a~~~s~~~~l~~v~~~~~~~~~~~-------e~~s~~~~~G~~lii~G~~~~~~~ 329 (334)
+.|++--..++..-..+++++ ++..++..-+-.++..++-.++.| ++-...-++|.+++++|+.+..++
T Consensus 78 l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 78 LFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 333332122222233355544 223334444444555555444433 223346889999999999988765
No 100
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=92.68 E-value=1.6 Score=36.51 Aligned_cols=101 Identities=9% Similarity=-0.054 Sum_probs=70.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCCc---ccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHH
Q 038896 67 PIFLTMCHMSACAILSYVSIVFLKIVPLQ---TVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFT 143 (334)
Q Consensus 67 p~~l~~~r~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~ 143 (334)
...-.+...+.+..++..+..+.+..... .-.+......+...|++..+-..+.-++++-++.+.++++.++.-...
T Consensus 185 d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~ 264 (309)
T COG5070 185 DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPI 264 (309)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChH
Confidence 45556677777777766644444332211 111334456777788888888889999999999999999999988888
Q ss_pred HHHHHHHhhcccchhhhhhhhhhh
Q 038896 144 ALFAYLMTFKREAWVTYATLVPVV 167 (334)
Q Consensus 144 ~il~~~~~~e~~~~~~~~~v~l~~ 167 (334)
.+-+.++++|..+...+.++.++.
T Consensus 265 alaGlvffdap~nf~si~sillGf 288 (309)
T COG5070 265 ALAGLVFFDAPVNFLSIFSILLGF 288 (309)
T ss_pred HHhhhhhcCCchhHHHHHHHHHHH
Confidence 888888878777776666655443
No 101
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=87.92 E-value=0.16 Score=43.07 Aligned_cols=74 Identities=5% Similarity=-0.008 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhh----hhhhhhhhheeee
Q 038896 100 RSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTY----ATLVPVVAGVVIA 173 (334)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~----~~v~l~~~G~~l~ 173 (334)
.+.-..-+..|+.++.++.++..|-+...+++.-.+..+..+...+-+.+++|||=+++++ .++++.+.|..+.
T Consensus 206 ~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l 283 (288)
T COG4975 206 NKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL 283 (288)
T ss_pred HHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence 4445555666889999999999999998888888888899999999999999999888885 4555666665544
No 102
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=87.79 E-value=0.48 Score=39.89 Aligned_cols=74 Identities=15% Similarity=0.031 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeee
Q 038896 100 RSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIA 173 (334)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~ 173 (334)
...++.+...+++.++++.+.+.-..+-++=.-+++..+.-.|+.+.+.++++..++.++|++..+.+.|...-
T Consensus 238 P~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 238 PYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 35678888899999999999998888888777888889999999999999999999999999999998887544
No 103
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.75 E-value=0.34 Score=42.74 Aligned_cols=118 Identities=17% Similarity=0.260 Sum_probs=76.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHhhcchhHHHHHH
Q 038896 180 FHLYGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIMEPKVLEVIVSLGRQHKFLWLLL 259 (334)
Q Consensus 180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (334)
.+..|.++++.+++.-+...++.|+-.++.+. ...- ..++. . .+. ....|+..
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~~r----------------a~~gg-~-~yl-----~~~~Ww~G 70 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SGLR----------------AGEGG-Y-GYL-----KEPLWWAG 70 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhh----hccc----------------ccCCC-c-chh-----hhHHHHHH
Confidence 35678899999999888888888886652110 0000 00110 0 000 00113332
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 260 LINSTMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
++.-..+=..|++ +....+++-.+.++.+..+.+.+++..+++|+++....+|++++++|....-
T Consensus 71 ~ltm~vGei~NFa---AYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 71 MLTMIVGEIANFA---AYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred HHHHHHHhHhhHH---HHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 3322233333333 3577888888899999999999999999999999999999999999976543
No 104
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=85.42 E-value=0.73 Score=37.73 Aligned_cols=61 Identities=18% Similarity=0.228 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhh
Q 038896 268 SANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGE 328 (334)
Q Consensus 268 ~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~ 328 (334)
+.++.+..++++.+|+.++-....+..+..+++++.++|++.-..++..++.+.|+....+
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 3455667789999999999999999999999999999999999999999999988876654
No 105
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=85.24 E-value=6.5 Score=34.31 Aligned_cols=64 Identities=20% Similarity=0.195 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 264 TMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
++-...+...+..+..++|+...+.--...++.-+++..+++.+++..+|+|+..+..|.....
T Consensus 94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence 3333333445666788888888898888999999999999999999999999999999987643
No 106
>PRK02237 hypothetical protein; Provisional
Probab=84.53 E-value=14 Score=27.22 Aligned_cols=46 Identities=13% Similarity=0.018 Sum_probs=39.0
Q ss_pred HHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhh
Q 038896 284 TLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEA 329 (334)
Q Consensus 284 ~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~ 329 (334)
..+..+-+-.+.+.+.++..-|++|+...++|.+++++|+.+..+.
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 3455666778899999999999999999999999999999776543
No 107
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=84.43 E-value=31 Score=31.17 Aligned_cols=229 Identities=14% Similarity=0.097 Sum_probs=127.1
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHH-hhhhHHHHHHHHHHHhh-------cccchhhhhhhhhhhhhe
Q 038896 99 SRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAV-GATTPFFTALFAYLMTF-------KREAWVTYATLVPVVAGV 170 (334)
Q Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~il~~~~~~-------e~~~~~~~~~v~l~~~G~ 170 (334)
+.+........|++...+...+-.+.+|+.++..+-+ ..+..++-.++-.++.+ ++-....++++++.++|+
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 4566777778888888888888889999887776532 34444444444333322 233456789999999999
Q ss_pred eeeec----CC-------Ccch-HHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCCCCHHHH----HHHHHHHHHHHH
Q 038896 171 VIASE----GE-------PGFH-LYGFIMCISATAARAFKSVLQGILLS----SEGERLNSMNL----LLYMSPIAVLVL 230 (334)
Q Consensus 171 ~l~~~----~~-------~~~~-~~G~~~~l~a~~~~a~~~v~~~~~~~----~~~~~~~~~~~----~~~~~~~~~i~~ 230 (334)
++... .| .++| ..|.+.++.+.+..|..+.-.+.-.. ..+.+.+|... ......-+.+.-
T Consensus 149 ai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN 228 (344)
T PF06379_consen 149 AICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITN 228 (344)
T ss_pred HHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHH
Confidence 88852 11 1233 36999999999999988876554210 00112233211 111222233333
Q ss_pred HHHHHHhCh--hhH---HHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhcc----chhHHHHHhhHHHHHHHHHHH
Q 038896 231 LPAALIMEP--KVL---EVIVSLGRQHKFLWLLLLINSTMAYSANLLNFLVTKHT----SALTLQVLGNAKGAVAVVISI 301 (334)
Q Consensus 231 ~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~a~~~s~~~~l~~v~~~~~~~ 301 (334)
++..+.... .+. .+..........-+....+.|+.-|..-+.+-+.-.+. +.....+...+..+++-+.+.
T Consensus 229 ~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl 308 (344)
T PF06379_consen 229 LIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL 308 (344)
T ss_pred HHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH
Confidence 444433211 011 01100000001113344445555444433333333333 356677788888888888887
Q ss_pred HHhCC------ccccchhhhHHHHHHHHHHhhh
Q 038896 302 LLFRN------PVTFIGIAGYTMTVLGVAAYGE 328 (334)
Q Consensus 302 ~~~~e------~~s~~~~~G~~lii~G~~~~~~ 328 (334)
++ +| +.-..-++|+++++.++.+.-+
T Consensus 309 ~l-kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 309 IL-KEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HH-HHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 65 44 3334568899988888776543
No 108
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=84.12 E-value=7.9 Score=28.39 Aligned_cols=46 Identities=15% Similarity=0.034 Sum_probs=39.2
Q ss_pred HHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhh
Q 038896 284 TLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEA 329 (334)
Q Consensus 284 ~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~ 329 (334)
..+..+-+-.+.+.+.++..-+++|+...++|..+++.|+.+..+.
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3455666778999999999999999999999999999999876544
No 109
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=78.62 E-value=9.1 Score=33.34 Aligned_cols=108 Identities=6% Similarity=-0.048 Sum_probs=73.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhccCC----cccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhH
Q 038896 65 RFPIFLTMCHMSACAILSYVSIVFLKIVPL----QTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTP 140 (334)
Q Consensus 65 ~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p 140 (334)
+.-+.+++...+.+.++..+.....+..+. +..+..+.|..+...|++.........+=++.+++=+..+-.....
T Consensus 213 ~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka 292 (347)
T KOG1442|consen 213 DCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKA 292 (347)
T ss_pred CeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHH
Confidence 345888999999999998887666554331 2333455555566666666555555556666666655555555556
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhhhhhheee
Q 038896 141 FFTALFAYLMTFKREAWVTYATLVPVVAGVVI 172 (334)
Q Consensus 141 i~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l 172 (334)
.-=.+++..+.+|.-+...|-+.++++.|..+
T Consensus 293 ~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~ 324 (347)
T KOG1442|consen 293 AAQTVLAVAYYSETKSGLWWTSNIVVLVGSLA 324 (347)
T ss_pred HHHHHHHHHHHHHHhhhheeeeeEEEEehhHH
Confidence 66678888899999999999888877776543
No 110
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=66.83 E-value=16 Score=31.91 Aligned_cols=139 Identities=10% Similarity=-0.088 Sum_probs=67.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHH-----HH--hccCCcccCchHHHH
Q 038896 32 KQTLFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIV-----FL--KIVPLQTVKSRSQLA 104 (334)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~-----~~--~~~~~~~~~~~~~~~ 104 (334)
.+....+.+..+..+.|.-+...++..+++||=+ |=...+..-+......+.+.. +. ...++-..+. ..
T Consensus 160 ~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh-~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~---~g 235 (330)
T KOG1583|consen 160 FWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH-WKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPL---LG 235 (330)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccc---cC
Confidence 3344444555555677777889999999987644 555555544443333222110 01 0011000000 11
Q ss_pred HHHHHHHHHHHH-hhhhhhhccccc-------hhHHHHHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeee
Q 038896 105 KIATLSTVFCGS-VVGGNISLRYLP-------VSFNQAVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIAS 174 (334)
Q Consensus 105 ~~l~~~~~~~~~-~~~~~~al~~~~-------~~~~~~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~ 174 (334)
-.+|....+.+. ...++.+.+.+. +=+.++...+-=.+..+++.+.++..++...|+|..++++|..+.+
T Consensus 236 ~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 236 FKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 114445555332 333344433321 1112233344445555666666666677777777776666665543
No 111
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=66.77 E-value=49 Score=24.33 Aligned_cols=60 Identities=13% Similarity=0.171 Sum_probs=39.4
Q ss_pred HHHhhhhhhhccccchhHHHHHhhh-hHHHHHHHHHHHhhcccchhhhhhhhhhhhheeee
Q 038896 114 CGSVVGGNISLRYLPVSFNQAVGAT-TPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIA 173 (334)
Q Consensus 114 ~~~~~~~~~al~~~~~~~~~~l~~~-~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~ 173 (334)
++..-..=.|.+..+.+.--+++=. +...-..++.+.+||++++....|.++.++++..+
T Consensus 46 ~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 46 CLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 3333344456666666655555533 23333457788899999999999999988877553
No 112
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=62.14 E-value=7 Score=28.57 Aligned_cols=29 Identities=10% Similarity=0.158 Sum_probs=25.0
Q ss_pred HHHHHHHhCCccccchhhhHHHHHHHHHH
Q 038896 297 VVISILLFRNPVTFIGIAGYTMTVLGVAA 325 (334)
Q Consensus 297 ~~~~~~~~~e~~s~~~~~G~~lii~G~~~ 325 (334)
+.+++++++|++++.++.|.++++.+++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 45678899999999999999999888654
No 113
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=61.33 E-value=63 Score=26.45 Aligned_cols=101 Identities=10% Similarity=0.072 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHH-HhccCCcccCchHHHHHHHHHHHHHHHHh
Q 038896 39 SLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVSIVF-LKIVPLQTVKSRSQLAKIATLSTVFCGSV 117 (334)
Q Consensus 39 ~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 117 (334)
+...+....|..+.+++|-+.. +-+.....--+++...++.+.++ .+.+. +...|..+++.+.......+-.
T Consensus 103 l~lg~~aLlsgitaff~~nA~~-----~GlItlll~a~vgGfamy~my~y~yr~~a--d~sqr~~~~K~~lv~~~sm~lW 175 (226)
T COG4858 103 LFLGAMALLSGITAFFQKNAQV-----YGLITLLLTAVVGGFAMYIMYYYAYRMRA--DNSQRPGTWKYLLVAVLSMLLW 175 (226)
T ss_pred HHHHHHHHHHHHHHHHhcCCcc-----hhHHHHHHHHHhhhHHHHHHHHHHHHhhc--ccccCCchHHHHHHHHHHHHHH
Confidence 3333444555666677775322 12222333333444444433332 23222 1112333333333333333333
Q ss_pred hhhhhhccccchhHHHHHhhhhHHHHHHHHHH
Q 038896 118 VGGNISLRYLPVSFNQAVGATTPFFTALFAYL 149 (334)
Q Consensus 118 ~~~~~al~~~~~~~~~~l~~~~pi~~~il~~~ 149 (334)
.+-+.+-..+|.+..- .+.|+...+.+.+
T Consensus 176 i~v~i~t~~lPtslN~---~L~pi~l~IiGav 204 (226)
T COG4858 176 IAVMIATVFLPTSLNP---QLPPIALTIIGAV 204 (226)
T ss_pred HHHHHHHhhCCCcCCc---CCchHHHHHHHHH
Confidence 3333555556655443 3444444444433
No 114
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=59.61 E-value=56 Score=28.60 Aligned_cols=114 Identities=10% Similarity=-0.039 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCcc----cCchHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHH
Q 038896 68 IFLTMCHMSACAILSYVSIVFLKIVPLQT----VKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFT 143 (334)
Q Consensus 68 ~~l~~~r~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~ 143 (334)
..+.++...++.+.++......+..-... ..+.+.....+..+....++...-..-.+.-.+..+..+...---.|
T Consensus 221 ~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavT 300 (367)
T KOG1582|consen 221 SEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVT 300 (367)
T ss_pred ceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHH
Confidence 44455555555555544333222211100 01233444444444443333332222233445666666667777888
Q ss_pred HHHHHHHhhcccchhhhhhhhhhhhheeeeecCCCcch
Q 038896 144 ALFAYLMTFKREAWVTYATLVPVVAGVVIASEGEPGFH 181 (334)
Q Consensus 144 ~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~~~~~~ 181 (334)
.+++++++.+.++-...-+..+++.|..+=.+++.+-.
T Consensus 301 i~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk~ 338 (367)
T KOG1582|consen 301 ILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNKI 338 (367)
T ss_pred HHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCCC
Confidence 99999999999999888899999999988877664433
No 115
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=59.38 E-value=1.1e+02 Score=26.48 Aligned_cols=100 Identities=10% Similarity=0.081 Sum_probs=67.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCCcccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHH
Q 038896 67 PIFLTMCHMSACAILSYVSIVFLKIVPLQTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALF 146 (334)
Q Consensus 67 p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il 146 (334)
++..-+..+....+..+++... +..+ ......+..|.+++.++.+.....+.+..+....+=+..-+.+--.
T Consensus 27 g~~fQw~~~~~i~~~g~~v~~~-~~~p-------~f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~ 98 (254)
T PF07857_consen 27 GFFFQWVMCSGIFLVGLVVNLI-LGFP-------PFYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWA 98 (254)
T ss_pred cHHHHHHHHHHHHHHHHHHHHh-cCCC-------cceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 7766666666555555543332 2111 2345566778889999999999999999999999988877766654
Q ss_pred HHH--Hhh---cc--cchhhhhhhhhhhhheeeee
Q 038896 147 AYL--MTF---KR--EAWVTYATLVPVVAGVVIAS 174 (334)
Q Consensus 147 ~~~--~~~---e~--~~~~~~~~v~l~~~G~~l~~ 174 (334)
.-. +++ |. -.+..++|+++.++|..+..
T Consensus 99 ~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~ 133 (254)
T PF07857_consen 99 SGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS 133 (254)
T ss_pred HhhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence 432 222 22 24556888888888887664
No 116
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=58.46 E-value=12 Score=27.42 Aligned_cols=70 Identities=14% Similarity=0.104 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccchhHHH-HHhhhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeee
Q 038896 103 LAKIATLSTVFCGSVVGGNISLRYLPVSFNQ-AVGATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIA 173 (334)
Q Consensus 103 ~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~-~l~~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~ 173 (334)
+.+.+|..+- -.+..+++.-++..|.+.+. +-.+++-.|+.+.+..+..|....+..+|..++++|..+.
T Consensus 53 w~Y~iPFllN-qcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 53 WEYLIPFLLN-QCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHH-HhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 4455554443 34566777778888877765 3457788899999988777777888889999999987553
No 117
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=58.28 E-value=69 Score=23.47 Aligned_cols=45 Identities=13% Similarity=-0.008 Sum_probs=36.6
Q ss_pred HHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHhhhh
Q 038896 285 LQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAYGEA 329 (334)
Q Consensus 285 ~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~~~ 329 (334)
.+-.+-+-.+.+.+..++.-+..++...+.|.++.++|.......
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 344555667888999999989999999999999999997765544
No 118
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=55.75 E-value=5.2 Score=34.42 Aligned_cols=57 Identities=18% Similarity=0.269 Sum_probs=49.7
Q ss_pred HHHHHHHHhccchhHHHHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHh
Q 038896 270 NLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAY 326 (334)
Q Consensus 270 ~~~~~~~~~~~~a~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~ 326 (334)
|+....+.|+++-+....+..-..++..+++|++++.+-.++++.|.++++.|+.+.
T Consensus 92 Ny~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvvmv 148 (336)
T KOG2766|consen 92 NYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMV 148 (336)
T ss_pred cEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEE
Confidence 334445678999999999999999999999999999999999999999999998754
No 119
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.75 E-value=31 Score=24.87 Aligned_cols=31 Identities=13% Similarity=0.196 Sum_probs=26.6
Q ss_pred HHHHHHHhCCccccchhhhHHHHHHHHHHhh
Q 038896 297 VVISILLFRNPVTFIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 297 ~~~~~~~~~e~~s~~~~~G~~lii~G~~~~~ 327 (334)
+.++.+.++|++.+.++.|..++..|+++..
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 4568889999999999999999998887653
No 120
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=53.01 E-value=4.5 Score=35.12 Aligned_cols=99 Identities=7% Similarity=-0.016 Sum_probs=0.0
Q ss_pred ccccchhHHHHHhhhhHHHHHHHHHHH-hhccc-chhhhhhhhhhhhheeeeecCC--CcchHHHHHHHHHHHHHHHHHH
Q 038896 124 LRYLPVSFNQAVGATTPFFTALFAYLM-TFKRE-AWVTYATLVPVVAGVVIASEGE--PGFHLYGFIMCISATAARAFKS 199 (334)
Q Consensus 124 l~~~~~~~~~~l~~~~pi~~~il~~~~-~~e~~-~~~~~~~v~l~~~G~~l~~~~~--~~~~~~G~~~~l~a~~~~a~~~ 199 (334)
++-.+-+-.+++.++..+.+.++-.++ +|+|+ -..-.+++++++.-..+..... .+.-+.|+++.++.....-.-+
T Consensus 44 msd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW 123 (381)
T PF05297_consen 44 MSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVW 123 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 344555666778888877777665544 45554 3333455555554444443322 2333456655444433222222
Q ss_pred HHHHHHhccCCCCCCHHHHHHHHHHH
Q 038896 200 VLQGILLSSEGERLNSMNLLLYMSPI 225 (334)
Q Consensus 200 v~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (334)
.+.. +++ +.+.+-++++++...+
T Consensus 124 ~Ym~-lLr--~~GAs~WtiLaFcLAF 146 (381)
T PF05297_consen 124 FYMW-LLR--ELGASFWTILAFCLAF 146 (381)
T ss_dssp --------------------------
T ss_pred HHHH-HHH--HhhhHHHHHHHHHHHH
Confidence 2222 344 3456777776554433
No 121
>PRK02237 hypothetical protein; Provisional
Probab=51.15 E-value=98 Score=22.88 Aligned_cols=39 Identities=8% Similarity=0.030 Sum_probs=31.0
Q ss_pred hhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeec
Q 038896 137 ATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASE 175 (334)
Q Consensus 137 ~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~ 175 (334)
....+...+-.+.+-|+|+++.++++..+.++|+.++..
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 344455556778888999999999999999999976643
No 122
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=49.83 E-value=15 Score=27.01 Aligned_cols=39 Identities=15% Similarity=0.106 Sum_probs=31.5
Q ss_pred hhhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeec
Q 038896 137 ATTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASE 175 (334)
Q Consensus 137 ~~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~ 175 (334)
....+...+-.+.+-|+||++.++++..+.+.|+.++..
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 444555666778888999999999999999999977654
No 123
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=46.17 E-value=30 Score=25.30 Aligned_cols=39 Identities=13% Similarity=0.087 Sum_probs=30.2
Q ss_pred hhHHHHHHHHHHHhhcccchhhhhhhhhhhhheeeeecC
Q 038896 138 TTPFFTALFAYLMTFKREAWVTYATLVPVVAGVVIASEG 176 (334)
Q Consensus 138 ~~pi~~~il~~~~~~e~~~~~~~~~v~l~~~G~~l~~~~ 176 (334)
...+...+-.++.-|+|+++.++++..+.++|+.++...
T Consensus 67 vyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 67 VYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred hHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 334445555677789999999999999999998776653
No 124
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=39.76 E-value=2e+02 Score=23.09 Aligned_cols=57 Identities=14% Similarity=0.101 Sum_probs=33.0
Q ss_pred HHhhcccchhhhhhhh-------hhhhheeeeecCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 038896 149 LMTFKREAWVTYATLV-------PVVAGVVIASEGEPGFHLYGFIMCISATAARAFKSVLQGIL 205 (334)
Q Consensus 149 ~~~~e~~~~~~~~~v~-------l~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~ 205 (334)
++.|..|+..+.+|+. +++.|+++....+.+.-......++.+++.+++-.++..-+
T Consensus 91 ~v~KtsP~LYr~LGIfLPLITTNCaVLgvaLln~~~~~~f~qsv~~gf~a~lGfslvmvlfA~i 154 (193)
T COG4657 91 VVRKTSPTLYRLLGIFLPLITTNCAVLGVALLNINEGHNFLQSVVYGFGAALGFSLVMVLFAAI 154 (193)
T ss_pred HHHccCHHHHHHHHHhhhhHhhchHHHHHHHHHhhhhhhHHHHHHHHhhhHhhHHHHHHHHHHH
Confidence 3444455555555554 34556666655444433456677777777777776665443
No 125
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=38.03 E-value=3.6e+02 Score=25.62 Aligned_cols=22 Identities=23% Similarity=0.545 Sum_probs=15.9
Q ss_pred chhhhHHHHHHHHHHhhhhhhh
Q 038896 311 IGIAGYTMTVLGVAAYGEAKRR 332 (334)
Q Consensus 311 ~~~~G~~lii~G~~~~~~~~~~ 332 (334)
....|.++...|..+|.+.+++
T Consensus 417 ~~~~~~~~~~~g~~~y~~~~~~ 438 (473)
T TIGR00905 417 YLLLGFILYAPGIIFYGRARKE 438 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4567888889998888765443
No 126
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=37.68 E-value=1.1e+02 Score=23.37 Aligned_cols=53 Identities=17% Similarity=0.254 Sum_probs=37.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHH
Q 038896 32 KQTLFILSLVLLWYSSNIGVLLLNKYLLSNYGFRFPIFLTMCHMSACAILSYVS 85 (334)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~l~~~~~ 85 (334)
++.+.++.+++.+.+.++...++-|.++..+ -+||++++-+....-..+.+++
T Consensus 53 ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m-~NY~fFL~QlTt~gyvpIffaV 105 (130)
T PF08627_consen 53 KENFKLLVYVVVYVVSGVINRVLYKKMTNPM-KNYPFFLNQLTTFGYVPIFFAV 105 (130)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchHHHHHhcccceehHHHHH
Confidence 5578888888889888888888888877762 2567777766554444444443
No 127
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=32.08 E-value=81 Score=23.21 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=36.4
Q ss_pred HHHHhccchhHH-HHHhhHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHh
Q 038896 274 FLVTKHTSALTL-QVLGNAKGAVAVVISILLFRNPVTFIGIAGYTMTVLGVAAY 326 (334)
Q Consensus 274 ~~~~~~~~a~~~-s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~lii~G~~~~ 326 (334)
++.+++.+-+.+ -+.+.+.-++..+.|..+..|...-..++|..+++.|+.+.
T Consensus 70 ~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 70 YLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 444555443322 23455567788888887766667788999999999998753
No 128
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.32 E-value=2.1e+02 Score=20.80 Aligned_cols=29 Identities=10% Similarity=0.183 Sum_probs=24.3
Q ss_pred HHHHHHhhcccchhhhhhhhhhhhheeee
Q 038896 145 LFAYLMTFKREAWVTYATLVPVVAGVVIA 173 (334)
Q Consensus 145 il~~~~~~e~~~~~~~~~v~l~~~G~~l~ 173 (334)
.++.+.+||.+++..+.+..++..|+.++
T Consensus 85 ~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 85 PFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 46788899999999999999888887654
No 129
>PF09964 DUF2198: Uncharacterized protein conserved in bacteria (DUF2198); InterPro: IPR019242 This family of various hypothetical archaeal proteins has no known function.
Probab=28.54 E-value=88 Score=21.34 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=29.3
Q ss_pred hhcccchhhhhhhhhhhhheeeeecCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 038896 151 TFKREAWVTYATLVPVVAGVVIASEGEPGFHLYGFIMCISATAARAFKSVLQGILLS 207 (334)
Q Consensus 151 ~~e~~~~~~~~~v~l~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~ 207 (334)
+-.|+|..+++|.++.+.=++...+.+-..+++ ..++.+++......+.+++.+
T Consensus 16 lFtrVT~n~~vg~~lt~~Li~ASvykGyt~~~~---ii~iD~~Sl~aGf~~a~~m~~ 69 (74)
T PF09964_consen 16 LFTRVTYNHYVGTILTVALIAASVYKGYTHTWW---IIFIDAVSLTAGFLYAKKMLK 69 (74)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhccccchH---HHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999887655444444444444432 223333444444455555443
No 130
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=27.78 E-value=64 Score=22.69 Aligned_cols=24 Identities=21% Similarity=0.016 Sum_probs=18.7
Q ss_pred ccccchhhhHHHHHHHHHHhhhhh
Q 038896 307 PVTFIGIAGYTMTVLGVAAYGEAK 330 (334)
Q Consensus 307 ~~s~~~~~G~~lii~G~~~~~~~~ 330 (334)
..++..++|+.+++.|..+|..++
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~ 27 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRF 27 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHH
Confidence 467778888888888888887554
No 131
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=27.70 E-value=50 Score=18.26 Aligned_cols=15 Identities=13% Similarity=0.162 Sum_probs=7.9
Q ss_pred ccccchhhhHHHHHH
Q 038896 307 PVTFIGIAGYTMTVL 321 (334)
Q Consensus 307 ~~s~~~~~G~~lii~ 321 (334)
.-+...++|.+++..
T Consensus 9 ~~~~~~~~G~~l~~~ 23 (34)
T TIGR01167 9 GNSLLLLLGLLLLGL 23 (34)
T ss_pred ccHHHHHHHHHHHHH
Confidence 344556677744444
No 132
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=25.53 E-value=47 Score=29.54 Aligned_cols=134 Identities=10% Similarity=0.000 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHh-C--h----hhHHHHHHhhcchhHHHHHHHH
Q 038896 189 ISATAARAFKSVLQGILLSSEGERLNSMNLLLYMSPIAVLVLLPAALIM-E--P----KVLEVIVSLGRQHKFLWLLLLI 261 (334)
Q Consensus 189 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~--~----~~~~~~~~~~~~~~~~~~~~~~ 261 (334)
+++.+|++.+-..+|..-++. +. .+..++=..++.++......++ + + ......++....++.-+..-+.
T Consensus 2 ~itmlcwGSW~nt~kL~~r~g--R~--~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~a 77 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRG--RL--PQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMA 77 (336)
T ss_pred eeehhhhcChHHHHHHHHhcC--Cc--cceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHH
Confidence 456788888888888775421 11 1234444444444433332222 1 1 1111222223334444555555
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHH-hhHHHHHHHHHHHHHhCCccc--cchhhhHHHHHHHHHHhh
Q 038896 262 NSTMAYSANLLNFLVTKHTSALTLQVL-GNAKGAVAVVISILLFRNPVT--FIGIAGYTMTVLGVAAYG 327 (334)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~a~~~s~~-~~l~~v~~~~~~~~~~~e~~s--~~~~~G~~lii~G~~~~~ 327 (334)
+|++--..|++.-+++...+-..+-++ ..+.-++++.+.++. +++.+ ..-+-|.+++++++++-.
T Consensus 78 GGvvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 78 GGVVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred hhHhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHH
Confidence 666655666665555554443222211 112334444555543 44444 255668888777776654
No 133
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=23.94 E-value=4.5e+02 Score=22.35 Aligned_cols=76 Identities=9% Similarity=0.016 Sum_probs=40.4
Q ss_pred cccCchHHHHHHHHHHHHHHHHhhhhhhhccccchhHHHHHhhhhHHHHHHH--H-HHHhhcccchhhhhhhhhhhhhe
Q 038896 95 QTVKSRSQLAKIATLSTVFCGSVVGGNISLRYLPVSFNQAVGATTPFFTALF--A-YLMTFKREAWVTYATLVPVVAGV 170 (334)
Q Consensus 95 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~il--~-~~~~~e~~~~~~~~~v~l~~~G~ 170 (334)
++.+++..+...+|+=+|.+.-....-...+..+.+...+-..+.-+|.... + .+..+.+.+....++-.+.+.|.
T Consensus 94 ~~~s~~t~lal~~PCPvCl~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~i~il~ss~i~r~~~~~~p~~LG~~Mi~~Gl 172 (224)
T PF09930_consen 94 KDSSRRTFLALSLPCPVCLTAIFFSIMLLAPSIGLSGWEIGLVLGLIFFILILLSSFIFRRLKKPYPIILGNFMIFLGL 172 (224)
T ss_pred CCCcccchhhhhcCchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 3445667777788887777555444445556666666666555555544432 2 22223333344444444444443
No 134
>PF07123 PsbW: Photosystem II reaction centre W protein (PsbW); InterPro: IPR009806 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbW found in PSII, where it is a subunit of the oxygen-evolving complex. PsbW appears to have several roles, including guiding PSII biogenesis and assembly, stabilising dimeric PSII [], and facilitating PSII repair after photo-inhibition []. There appears to be two classes of PsbW, class 1 being found predominantly in algae and cyanobacteria, and class 2 being found predominantly in plants. This entry represents class 2 PsbW.; GO: 0015979 photosynthesis, 0009507 chloroplast, 0009523 photosystem II
Probab=23.41 E-value=98 Score=23.90 Aligned_cols=30 Identities=17% Similarity=0.056 Sum_probs=24.6
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 038896 178 PGFHLYGFIMCISATAARAFKSVLQGILLS 207 (334)
Q Consensus 178 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~ 207 (334)
.+.+..|.++.-.-.+.|++|.++.+.+-+
T Consensus 101 lsn~~LgwIL~gVf~lIWslY~~~~~~l~e 130 (138)
T PF07123_consen 101 LSNNLLGWILLGVFGLIWSLYFVYTSTLDE 130 (138)
T ss_pred ccCchhHHHHHHHHHHHHHHHHhhccccCC
Confidence 345678888888889999999999998643
No 135
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=23.21 E-value=51 Score=19.54 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=10.8
Q ss_pred hhHHHHHHHHHHhhhhhhh
Q 038896 314 AGYTMTVLGVAAYGEAKRR 332 (334)
Q Consensus 314 ~G~~lii~G~~~~~~~~~~ 332 (334)
+|.++++.+.+++-+.+++
T Consensus 21 V~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred hHHHHHHHHHHhheEEecc
Confidence 3455566666666555443
No 136
>TIGR00994 3a0901s05TIC20 chloroplast protein import component, Tic20 family. Two families of proteins are involved in the chloroplast envelope import appartus.They are the three proteins of the outer membrane (TOC) and four proteins in the inner membrane (TIC). This family is specific for the Tic20 protein.
Probab=21.83 E-value=5.4e+02 Score=22.42 Aligned_cols=8 Identities=0% Similarity=-0.251 Sum_probs=3.6
Q ss_pred HHHHHhhh
Q 038896 54 LNKYLLSN 61 (334)
Q Consensus 54 ~~K~~~~~ 61 (334)
+...++..
T Consensus 135 fg~~lf~q 142 (267)
T TIGR00994 135 YADTAYHL 142 (267)
T ss_pred HHHHHHHH
Confidence 34444443
Done!