AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on

Query Sequence

>038899
MWRHRRLLSSFTAFTFLFFVLTQLGTGGAQEKETRVLDQKRISGPGSSPPTCRSKCGRCS
PCKPVHVPIQPGLSMPLEYYPEAWRCNCGNKLFMP

High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with CLL2 CLL2 CLL2 AT4G14723	protein from Arabidopsis thaliana	8.2e-28
BLAST match view associations BLAST with CLL1 CLL1 CLL1 AT3G22820	protein from Arabidopsis thaliana	3.2e-26
BLAST match view associations BLAST with CHAL CHAL CHAL AT2G30370	protein from Arabidopsis thaliana	4.9e-21
BLAST match view associations BLAST with AT1G80133 AT1G80133 AT1G80133	protein from Arabidopsis thaliana	3.4e-06
BLAST match view associations BLAST with EPF1 EPF1 EPF1 AT2G20875	protein from Arabidopsis thaliana	5.0e-05
BLAST match view associations BLAST with AT5G10310 AT5G10310 AT5G10310	protein from Arabidopsis thaliana	0.00045
BLAST match view associations BLAST with EPF2 EPF2 EPF2 AT1G34245	protein from Arabidopsis thaliana	0.00093

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038899
        (95 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1009023326 - symbol:CLL2 "AT4G14723" species:3...   311  8.2e-28   1
TAIR|locus:2094424 - symbol:CLL1 "AT3G22820" species:3702...   296  3.2e-26   1
TAIR|locus:2065719 - symbol:CHAL "AT2G30370" species:3702...   247  4.9e-21   1
TAIR|locus:4010713606 - symbol:AT1G80133 species:3702 "Ar...   107  3.4e-06   1
TAIR|locus:3436392 - symbol:EPF1 "AT2G20875" species:3702...    96  5.0e-05   1
TAIR|locus:2145367 - symbol:AT5G10310 "AT5G10310" species...    87  0.00045   1
TAIR|locus:505006168 - symbol:EPF2 "AT1G34245" species:37...    84  0.00093   1


>TAIR|locus:1009023326 [details] [associations]
            symbol:CLL2 "AT4G14723" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0010052 "guard cell differentiation" evidence=IMP]
            [GO:0010374 "stomatal complex development" evidence=IMP]
            GO:GO:0005576 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97336
            EMBL:AL161539 EMBL:Z97337 GO:GO:0010052 EMBL:DQ487600
            IPI:IPI00656672 RefSeq:NP_001031641.1 UniGene:At.51142
            EnsemblPlants:AT4G14723.1 GeneID:3769880 KEGG:ath:AT4G14723
            KEGG:dosa:Os03t0161600-01 KEGG:dosa:Os11t0581700-01 TAIR:At4g14723
            eggNOG:NOG254545 HOGENOM:HOG000238413 OMA:RWIGQRT PhylomeDB:Q2V3I3
            ProtClustDB:CLSN2918741 Genevestigator:Q2V3I3 Uniprot:Q2V3I3
        Length = 109

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 51/60 (85%), Positives = 53/60 (88%)

Query:    36 VLDQKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCNCGNKLFMP 95
             +   KR  GPGSSPPTCRSKCG+C PCKPVHVPIQPGLSMPLEYYPEAWRC CGNKLFMP
Sbjct:    50 IRSNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109


>TAIR|locus:2094424 [details] [associations]
            symbol:CLL1 "AT3G22820" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0010052 "guard cell differentiation"
            evidence=IMP] [GO:0010374 "stomatal complex development"
            evidence=IMP] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576
            EMBL:AB022223 GO:GO:0010052 HOGENOM:HOG000238413 EMBL:BT012590
            EMBL:BT014813 IPI:IPI00516230 RefSeq:NP_188921.1 UniGene:At.50215
            ProteinModelPortal:Q9LUH9 EnsemblPlants:AT3G22820.1 GeneID:821853
            KEGG:ath:AT3G22820 TAIR:At3g22820 eggNOG:NOG278824
            InParanoid:Q9LUH9 OMA:CEPCKAV PhylomeDB:Q9LUH9
            ProtClustDB:CLSN2913442 Genevestigator:Q9LUH9 Uniprot:Q9LUH9
        Length = 107

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 48/61 (78%), Positives = 53/61 (86%)

Query:    35 RVLDQKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCNCGNKLFM 94
             +++DQKR+ GPGS PP CR KCG+C PCK VHVPIQPGL MPLEYYPEAWRC CGNKLFM
Sbjct:    47 QIVDQKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFM 106

Query:    95 P 95
             P
Sbjct:   107 P 107


>TAIR|locus:2065719 [details] [associations]
            symbol:CHAL "AT2G30370" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:2000122 "negative
            regulation of stomatal complex development" evidence=IGI;IMP]
            EMBL:CP002685 GO:GO:2000122 IPI:IPI00992485 RefSeq:NP_850143.1
            UniGene:At.52976 EnsemblPlants:AT2G30370.1 GeneID:817587
            KEGG:ath:AT2G30370 OMA:HEDKDST Uniprot:F4IMT0
        Length = 230

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 41/66 (62%), Positives = 50/66 (75%)

Query:    30 QEKETRVLDQKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCNCG 89
             + KE  +  ++ + G GSSPP C SKCGRC+PCKPVHVP+ PG  +  EYYPEAWRC CG
Sbjct:   167 RSKEAEL--RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCG 224

Query:    90 NKLFMP 95
             NKL+MP
Sbjct:   225 NKLYMP 230


>TAIR|locus:4010713606 [details] [associations]
            symbol:AT1G80133 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005576 EMBL:AC009322 GO:GO:0010052
            EMBL:DQ487475 EMBL:DQ652630 IPI:IPI00775681 RefSeq:NP_001077850.1
            UniGene:At.68379 EnsemblPlants:AT1G80133.1 GeneID:5007859
            KEGG:ath:AT1G80133 TAIR:At1g80133 eggNOG:NOG254787
            HOGENOM:HOG000123646 OMA:WICRCRD PhylomeDB:Q1G3V9
            ProtClustDB:CLSN2920144 Genevestigator:Q1G3V9 Uniprot:Q1G3V9
        Length = 99

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 20/53 (37%), Positives = 26/53 (49%)

Query:    46 GSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLE---YYPEAWRCNCGNKLFMP 95
             GS PP C +KC  C PC P    I+       +   YYP  W C C +++F P
Sbjct:    47 GSEPPVCATKCRNCKPCLPYLFDIRGAHDDDDDSEPYYPVKWICRCRDRVFEP 99


>TAIR|locus:3436392 [details] [associations]
            symbol:EPF1 "AT2G20875" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0010375 "stomatal complex
            patterning" evidence=IMP] [GO:0010374 "stomatal complex
            development" evidence=IGI] [GO:2000122 "negative regulation of
            stomatal complex development" evidence=IMP] GO:GO:0005576
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0010374 EMBL:AC006234
            IPI:IPI00537528 RefSeq:NP_179684.1 UniGene:At.52849
            UniGene:At.69152 STRING:Q8S8I4 EnsemblPlants:AT2G20875.1
            GeneID:816621 KEGG:ath:AT2G20875 TAIR:At2g20875 eggNOG:NOG241289
            HOGENOM:HOG000240846 InParanoid:Q8S8I4 OMA:SHHHVGM PhylomeDB:Q8S8I4
            ProtClustDB:CLSN2913134 Genevestigator:Q8S8I4 GO:GO:2000122
            GO:GO:0010375 Uniprot:Q8S8I4
        Length = 104

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query:    29 AQEKETRVLDQKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCNC 88
             A +++ R  D  +++G  S  P C   CG CSPC+ V V          E  P A++C C
Sbjct:    39 ALKRQRRRPDTVQVAG--SRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMC 96

Query:    89 GNKLF 93
              NK +
Sbjct:    97 NNKSY 101


>TAIR|locus:2145367 [details] [associations]
            symbol:AT5G10310 "AT5G10310" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0005576 EMBL:AL360334 GO:GO:0010052
            EMBL:BT010810 EMBL:BT011282 IPI:IPI00536277 PIR:T50819
            RefSeq:NP_196593.1 UniGene:At.32394 EnsemblPlants:AT5G10310.1
            GeneID:830895 KEGG:ath:AT5G10310 TAIR:At5g10310 eggNOG:NOG319258
            HOGENOM:HOG000239501 InParanoid:Q9LFT5 OMA:NCHPCMA PhylomeDB:Q9LFT5
            ProtClustDB:CLSN2686384 Genevestigator:Q9LFT5 Uniprot:Q9LFT5
        Length = 122

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query:    46 GSSPPTCRSKCGRCSPCKPVHVPIQP 71
             GS+PP+C ++C  C PC  + VP  P
Sbjct:    49 GSTPPSCHNRCNNCHPCMAIQVPTLP 74


>TAIR|locus:505006168 [details] [associations]
            symbol:EPF2 "AT1G34245" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0010052 "guard cell
            differentiation" evidence=IMP] [GO:0010374 "stomatal complex
            development" evidence=IMP] [GO:0048730 "epidermis morphogenesis"
            evidence=IMP] [GO:2000122 "negative regulation of stomatal complex
            development" evidence=IMP] EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005576 GO:GO:0048730 EMBL:AC007454 HOGENOM:HOG000240846
            GO:GO:2000122 EMBL:AB499311 EMBL:AY086790 IPI:IPI00518431
            RefSeq:NP_564442.1 UniGene:At.39780 STRING:Q8LC53
            EnsemblPlants:AT1G34245.1 GeneID:840324 KEGG:ath:AT1G34245
            TAIR:At1g34245 eggNOG:NOG235778 InParanoid:Q8LC53 OMA:VEMEMYP
            PhylomeDB:Q8LC53 ProtClustDB:CLSN2914950 Genevestigator:Q8LC53
            GO:GO:0010052 Uniprot:Q8LC53
        Length = 120

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 17/48 (35%), Positives = 24/48 (50%)

Query:    46 GSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCNCGNKLF 93
             GSS P C   CG CSPCK V +  +  ++   E     +RC C  + +
Sbjct:    70 GSSLPDCSYACGACSPCKRVMISFECSVA---ESCSVIYRCTCRGRYY 114


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.138   0.491    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       95        73   0.00091  102 3  12 22  0.37    29
                                                     29  0.45    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  503 (54 KB)
  Total size of DFA:  92 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.15u 0.06s 8.21t   Elapsed:  00:00:09
  Total cpu time:  8.15u 0.06s 8.21t   Elapsed:  00:00:09
  Start:  Fri May 10 00:01:16 2013   End:  Fri May 10 00:01:25 2013

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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data