BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038905
(709 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 151/254 (59%), Gaps = 9/254 (3%)
Query: 443 TVIVVKKL-DRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
T++ VK+L + Q GE +F+ EV MI H+NL+RL GFC RLLVY ++ NG++
Sbjct: 63 TLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 122
Query: 502 ASFLFENLKP----GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
AS L E + W R IA ARGL +LH +C +IIH D+K NILLD+ + A
Sbjct: 123 ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 182
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
+ DFGLAKL+ + + A+RGT G++A PE+ + DV+ +GV+LLE+I+ +
Sbjct: 183 VGDFGLAKLMDY-KDXHVXXAVRGTIGHIA-PEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 618 KSFDIE--MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQED 675
++FD+ ++ +L DW + KL+ LV+ D++ + VE+L+ V++ C Q
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 300
Query: 676 PSLRPTMRKVSQML 689
P RP M +V +ML
Sbjct: 301 PMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 149/253 (58%), Gaps = 9/253 (3%)
Query: 444 VIVVKKL-DRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
++ VK+L + Q GE +F+ EV MI H+NL+RL GFC RLLVY ++ NG++A
Sbjct: 56 LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115
Query: 503 SFLFENLKP----GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
S L E + W R IA ARGL +LH +C +IIH D+K NILLD+ + A +
Sbjct: 116 SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRK 618
DFGLAKL+ + + A+RG G++A PE+ + DV+ +GV+LLE+I+ ++
Sbjct: 176 GDFGLAKLMDY-KDXHVXXAVRGXIGHIA-PEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
Query: 619 SFDIE--MGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDP 676
+FD+ ++ +L DW + KL+ LV+ D++ + VE+L+ V++ C Q P
Sbjct: 234 AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP 293
Query: 677 SLRPTMRKVSQML 689
RP M +V +ML
Sbjct: 294 MERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 116/217 (53%), Gaps = 8/217 (3%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKP----GWNLRANIAFQIARGLL 528
H +LV L+GFCDE +L+YK++ NG L L+ + P W R I ARGL
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 529 HLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVAS 588
+LH IIH D+K NILLD+ + +I+DFG++K T + ++GT GY+
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI-D 209
Query: 589 PEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
PE+F +T DVYSFGV+L E++ R + + E L +WA + + NG+L+ +V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
+ ++ + + K ++ C+ RP+M V
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 116/217 (53%), Gaps = 8/217 (3%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKP----GWNLRANIAFQIARGLL 528
H +LV L+GFCDE +L+YK++ NG L L+ + P W R I ARGL
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 529 HLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVAS 588
+LH IIH D+K NILLD+ + +I+DFG++K T + ++GT GY+
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI-D 209
Query: 589 PEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
PE+F +T DVYSFGV+L E++ R + + E L +WA + + NG+L+ +V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
+ ++ + + K ++ C+ RP+M V
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 133/254 (52%), Gaps = 14/254 (5%)
Query: 443 TVIVVKKL----DRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNN 498
T + VKKL D ++ +++F E+ ++ + H+NLV LLGF +G + LVY ++ N
Sbjct: 55 TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN 114
Query: 499 GTLASFL--FENLKP-GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN 555
G+L L + P W++R IA A G+ LH N IH DIK NILLD+ +
Sbjct: 115 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFT 171
Query: 556 AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ISDFGLA+ + I GT Y+A PE R IT D+YSFGV+LLEII+
Sbjct: 172 AKISDFGLARASEKFAQTVMXSRIVGTTAYMA-PEALRGE-ITPKSDIYSFGVVLLEIIT 229
Query: 616 CRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQED 675
+ D E E +L ++D ++ M D VE + V+ C+ E
Sbjct: 230 GLPAVD-EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEK 287
Query: 676 PSLRPTMRKVSQML 689
+ RP ++KV Q+L
Sbjct: 288 KNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 133/254 (52%), Gaps = 14/254 (5%)
Query: 443 TVIVVKKL----DRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNN 498
T + VKKL D ++ +++F E+ ++ + H+NLV LLGF +G + LVY ++ N
Sbjct: 55 TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN 114
Query: 499 GTLASFL--FENLKP-GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN 555
G+L L + P W++R IA A G+ LH N IH DIK NILLD+ +
Sbjct: 115 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFT 171
Query: 556 AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ISDFGLA+ + I GT Y+A PE R IT D+YSFGV+LLEII+
Sbjct: 172 AKISDFGLARASEKFAQTVMXXRIVGTTAYMA-PEALRGE-ITPKSDIYSFGVVLLEIIT 229
Query: 616 CRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQED 675
+ D E E +L ++D ++ M D VE + V+ C+ E
Sbjct: 230 GLPAVD-EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEK 287
Query: 676 PSLRPTMRKVSQML 689
+ RP ++KV Q+L
Sbjct: 288 KNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 133/254 (52%), Gaps = 14/254 (5%)
Query: 443 TVIVVKKL----DRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNN 498
T + VKKL D ++ +++F E+ ++ + H+NLV LLGF +G + LVY ++ N
Sbjct: 49 TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN 108
Query: 499 GTLASFL--FENLKP-GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN 555
G+L L + P W++R IA A G+ LH N IH DIK NILLD+ +
Sbjct: 109 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFT 165
Query: 556 AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ISDFGLA+ + I GT Y+A PE R IT D+YSFGV+LLEII+
Sbjct: 166 AKISDFGLARASEKFAQXVMXXRIVGTTAYMA-PEALRGE-ITPKSDIYSFGVVLLEIIT 223
Query: 616 CRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQED 675
+ D E E +L ++D ++ M D VE + V+ C+ E
Sbjct: 224 GLPAVD-EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEK 281
Query: 676 PSLRPTMRKVSQML 689
+ RP ++KV Q+L
Sbjct: 282 KNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 126/254 (49%), Gaps = 14/254 (5%)
Query: 443 TVIVVKKL----DRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNN 498
T + VKKL D ++ +++F E+ + + H+NLV LLGF +G + LVY + N
Sbjct: 46 TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPN 105
Query: 499 GTLASFL--FENLKP-GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN 555
G+L L + P W+ R IA A G+ LH N IH DIK NILLD+ +
Sbjct: 106 GSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFT 162
Query: 556 AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ISDFGLA+ I GT Y A PE R IT D+YSFGV+LLEII+
Sbjct: 163 AKISDFGLARASEKFAQXVXXSRIVGTTAYXA-PEALRGE-ITPKSDIYSFGVVLLEIIT 220
Query: 616 CRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQED 675
+ D E E +L ++D ++ D VE V+ C+ E
Sbjct: 221 GLPAVD-EHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEK 278
Query: 676 PSLRPTMRKVSQML 689
+ RP ++KV Q+L
Sbjct: 279 KNKRPDIKKVQQLL 292
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 35/270 (12%)
Query: 436 IQTSTRTT--VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVY 493
I+ + R T V+V+K+L R ++ ++ F EV ++ H N+++ +G + + +
Sbjct: 27 IKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86
Query: 494 KFLNNGTLASFL--FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
+++ GTL + ++ P W+ R + A IA G+ +LH S IIH D+ N L+
Sbjct: 87 EYIKGGTLRGIIKSMDSQYP-WSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVR 142
Query: 552 DYYNAQISDFGLAKLLTLNQS-----KAIKKAIRGTK------GYVASPEWFRNSTITAN 600
+ N ++DFGLA+L+ ++ +++KK R + Y +PE +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-DWAFDCYRNGKLDDLVEGDMEAMNDIK 659
VDV+SFG++L EII + +Y T D+ + V G ++
Sbjct: 203 VDVFSFGIVLCEIIG-----RVNADPDYLPRTMDFGLN----------VRGFLDRYCPPN 247
Query: 660 CVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
C +++ C DP RP+ K+ L
Sbjct: 248 CPPSFFPITVRCCDLDPEKRPSFVKLEHWL 277
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF-----ENLKPGWN 514
EF EV ++ + H N+V +G + N +V ++L+ G+L L E L
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDE--R 137
Query: 515 LRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA 574
R ++A+ +A+G+ +LH N + I+H D+K N+L+D Y ++ DFGL++L
Sbjct: 138 RRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA--SXFL 194
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K GT ++A PE R+ DVYSFGV+L E+ + ++ +
Sbjct: 195 XSKXAAGTPEWMA-PEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 28/259 (10%)
Query: 435 VIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYK 494
V + R + +K+++ + K F E+ + + H N+V+L G C LV +
Sbjct: 24 VCKAKWRAKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVME 79
Query: 495 FLNNGTLASFLFENLKPGWNLRANI---AFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
+ G+L + L + A+ Q ++G+ +LH +IH D+KP N+LL
Sbjct: 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV 139
Query: 552 DYYNA-QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+I DFG A + + + +G+ ++A PE F S + DV+S+G++L
Sbjct: 140 AGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMA-PEVFEGSNYSEKCDVFSWGIIL 193
Query: 611 LEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIW 670
E+I+ RK FD G + I+ WA NG L++ N K +E L+
Sbjct: 194 WEVITRRKPFDEIGGPAFRIM--WAV---HNGTRPPLIK------NLPKPIESLMTR--- 239
Query: 671 CIQEDPSLRPTMRKVSQML 689
C +DPS RP+M ++ +++
Sbjct: 240 CWSKDPSQRPSMEEIVKIM 258
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 28/259 (10%)
Query: 435 VIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYK 494
V + R + +K+++ + K F E+ + + H N+V+L G C LV +
Sbjct: 25 VCKAKWRAKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVME 80
Query: 495 FLNNGTLASFLFENLKPGWNLRANI---AFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
+ G+L + L + A+ Q ++G+ +LH +IH D+KP N+LL
Sbjct: 81 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV 140
Query: 552 DYYNA-QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+I DFG A + + + +G+ ++A PE F S + DV+S+G++L
Sbjct: 141 AGGTVLKICDFGTACDIQTHMTNN-----KGSAAWMA-PEVFEGSNYSEKCDVFSWGIIL 194
Query: 611 LEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIW 670
E+I+ RK FD G + I+ WA NG L++ N K +E L+
Sbjct: 195 WEVITRRKPFDEIGGPAFRIM--WAV---HNGTRPPLIK------NLPKPIESLMTR--- 240
Query: 671 CIQEDPSLRPTMRKVSQML 689
C +DPS RP+M ++ +++
Sbjct: 241 CWSKDPSQRPSMEEIVKIM 259
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 11/166 (6%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF-----ENLKPGWN 514
EF EV ++ + H N+V +G + N +V ++L+ G+L L E L
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDE--R 137
Query: 515 LRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA 574
R ++A+ +A+G+ +LH N + I+H ++K N+L+D Y ++ DFGL++L +
Sbjct: 138 RRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFL 194
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K+ GT ++A PE R+ DVYSFGV+L E+ + ++ +
Sbjct: 195 SSKSAAGTPEWMA-PEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDE--GQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
+ K E+ ++ YH+N+V+ G C E G L+ +FL +G+L +L +N K NL+
Sbjct: 69 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQ 127
Query: 518 NI--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ A QI +G+ +L S Q +H D+ +N+L++ + +I DFGL K + ++
Sbjct: 128 QLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
Query: 576 KKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K R + + +PE S DV+SFGV L E+++
Sbjct: 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDE--GQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
+ K E+ ++ YH+N+V+ G C E G L+ +FL +G+L +L +N K NL+
Sbjct: 57 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQ 115
Query: 518 NI--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ A QI +G+ +L S Q +H D+ +N+L++ + +I DFGL K + ++
Sbjct: 116 QLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
Query: 576 KKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K R + + +PE S DV+SFGV L E+++
Sbjct: 173 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 5/172 (2%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
K F+ EV Q H+N+V ++ +E LV +++ TL+ ++ + + N
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAIN 115
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
QI G+ H H +I+H DIKPQNIL+D +I DFG+AK L+ S
Sbjct: 116 FTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNH 171
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 630
+ GT Y SPE + D+YS G++L E++ F+ E AI
Sbjct: 172 VLGTVQYF-SPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI 222
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 63 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 122 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 178
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 179 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 221
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 222 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 272
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 171 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 213
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 214 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL--FENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 64 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 123 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 179
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 180 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 222
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 223 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 273
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 120 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 176
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 177 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 219
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 220 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 57 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 116 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 172
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 173 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 215
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 216 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 266
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 56 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 114
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 115 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 171
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 172 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 214
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 215 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 171 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 213
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 214 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 65 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 124 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 180
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 181 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 223
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 224 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 274
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 60 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 119 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 175
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 176 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 218
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 219 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 269
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 120 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 176
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 177 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 219
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 220 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 41/268 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 33 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 91
Query: 493 YKFLNNGTLASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCD 542
+ + G L S+L EN P + +A +IA G+ +L+ N + +H D
Sbjct: 92 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 148
Query: 543 IKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTIT 598
+ +N ++ + + +I DFG+ + + ++ +K G KG + SPE ++ T
Sbjct: 149 LAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRK---GGKGLLPVRWMSPESLKDGVFT 203
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMND 657
DV+SFGV+L EI A L + + N + L ++EG + D
Sbjct: 204 TYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 248
Query: 658 IKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
C + L+ + C Q +P +RP+ ++
Sbjct: 249 -NCPDMLLELMRMCWQYNPKMRPSFLEI 275
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 50 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 108
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 109 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 165
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 166 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 208
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 209 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 259
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 170
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 171 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 213
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 214 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF 521
+ E + H N++ L G C + N LV +F G L L P ++ N A
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP-DILVNWAV 112
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILL------DDYYNA--QISDFGLAKLLTLNQSK 573
QIARG+ +LH IIH D+K NIL+ D N +I+DFGLA+ +
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHR 168
Query: 574 AIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K + G ++A PE R S + DV+S+GVLL E+++ F
Sbjct: 169 TTKMSAAGAYAWMA-PEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 41/268 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 42 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 100
Query: 493 YKFLNNGTLASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCD 542
+ + G L S+L EN P + +A +IA G+ +L+ N + +H D
Sbjct: 101 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 157
Query: 543 IKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTIT 598
+ +N ++ + + +I DFG+ + + ++ +K G KG + SPE ++ T
Sbjct: 158 LAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRK---GGKGLLPVRWMSPESLKDGVFT 212
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMND 657
DV+SFGV+L EI A L + + N + L ++EG + D
Sbjct: 213 TYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 257
Query: 658 IKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
C + L + C Q +P +RP+ ++
Sbjct: 258 -NCPDMLFELMRMCWQYNPKMRPSFLEI 284
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 473 HKNLVRLLGFCDEGQNRL-LVYKFLNNGTLASFLF--ENLKPGWNLRANIAF--QIARGL 527
H + L + E + L LV +N G + ++ + PG+ I + QI GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 528 LHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA 587
HLH II+ D+KP+N+LLDD N +ISD GLA L Q+K K GT G++A
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTPGFMA 357
Query: 588 SPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
PE +VD ++ GV L E+I+ R F
Sbjct: 358 -PELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 183
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEIXINKMLNHENVVKFYG 72
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA-PELLKRREF 184
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 473 HKNLVRLLGFCDEGQNRL-LVYKFLNNGTLASFLF--ENLKPGWNLRANIAF--QIARGL 527
H + L + E + L LV +N G + ++ + PG+ I + QI GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 528 LHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA 587
HLH II+ D+KP+N+LLDD N +ISD GLA L Q+K K GT G++A
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTPGFMA 357
Query: 588 SPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
PE +VD ++ GV L E+I+ R F
Sbjct: 358 -PELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 473 HKNLVRLLGFCDEGQNRL-LVYKFLNNGTLASFLF--ENLKPGWNLRANIAF--QIARGL 527
H + L + E + L LV +N G + ++ + PG+ I + QI GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 528 LHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA 587
HLH II+ D+KP+N+LLDD N +ISD GLA L Q+K K GT G++A
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTPGFMA 357
Query: 588 SPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
PE +VD ++ GV L E+I+ R F
Sbjct: 358 -PELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 72
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 184
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINAMLNHENVVKFYG 72
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 184
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEIXINKMLNHENVVKFYG 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA-PELLKRREF 183
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA-PELLKRREF 183
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 473 HKNLVRLLGFCDEGQNRL-LVYKFLNNGTLASFLF--ENLKPGWNLRANIAF--QIARGL 527
H + L + E + L LV +N G + ++ + PG+ I + QI GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 528 LHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA 587
HLH II+ D+KP+N+LLDD N +ISD GLA L Q+K K GT G++A
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTPGFMA 357
Query: 588 SPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
PE +VD ++ GV L E+I+ R F
Sbjct: 358 -PELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA-PELLKRREF 183
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA-PELLKRREF 183
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 72
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 184
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 72
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 184
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 72
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 184
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 36/262 (13%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
++ VK L + ++F+ E ++ H+++VR G C EG+ L+V++++ +G L
Sbjct: 73 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 132
Query: 504 FLF------------ENLKP---GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNI 548
FL E++ P G +A Q+A G+++L +H D+ +N
Sbjct: 133 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNC 189
Query: 549 LLDDYYNAQISDFGLAK-LLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFG 607
L+ +I DFG+++ + + + + + + + PE T DV+SFG
Sbjct: 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR--WMPPESILYRKFTTESDVWSFG 247
Query: 608 VLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMV 667
V+L EI + K Y + A DC G+ E C ++ +
Sbjct: 248 VVLWEIFTYGKQ------PWYQLSNTEAIDCITQGR---------ELERPRACPPEVYAI 292
Query: 668 SIWCIQEDPSLRPTMRKVSQML 689
C Q +P R +++ V L
Sbjct: 293 MRGCWQREPQQRHSIKDVHARL 314
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 30/260 (11%)
Query: 445 IVVKKLDRVFQDGEKE-FKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VK L EKE +E+ +M H+N+V LLG C G L++ ++ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 503 SFLFENLKPG----WNLRANIAFQIA-RGLLHLHVN--------CSSQIIHCDIKPQNIL 549
+FL PG +N N Q++ R LLH S IH D+ +N+L
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 198
Query: 550 LDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVL 609
L + + A+I DFGLA+ + + + +K R ++A PE + T DV+S+G+L
Sbjct: 199 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA-PESIFDCVYTVQSDVWSYGIL 257
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L EI F + + IL N K LV+ + + + +
Sbjct: 258 LWEI------FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQ 303
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C +P+ RPT +++ L
Sbjct: 304 ACWALEPTHRPTFQQICSFL 323
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 41/268 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 48 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 106
Query: 493 YKFLNNGTLASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCD 542
+ + G L S+L EN P + +A +IA G+ +L+ N + +H D
Sbjct: 107 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 163
Query: 543 IKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTIT 598
+ +N ++ + + +I DFG+ + + ++ +K G KG + SPE ++ T
Sbjct: 164 LAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMSPESLKDGVFT 218
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMND 657
DV+SFGV+L EI A L + + N + L ++EG + D
Sbjct: 219 TYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 263
Query: 658 IKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
C + L + C Q +P +RP+ ++
Sbjct: 264 -NCPDMLFELMRMCWQYNPKMRPSFLEI 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 41/268 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 35 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 93
Query: 493 YKFLNNGTLASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCD 542
+ + G L S+L EN P + +A +IA G+ +L+ N + +H D
Sbjct: 94 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 150
Query: 543 IKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTIT 598
+ +N ++ + + +I DFG+ + + ++ +K G KG + SPE ++ T
Sbjct: 151 LAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMSPESLKDGVFT 205
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMND 657
DV+SFGV+L EI A L + + N + L ++EG + D
Sbjct: 206 TYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 250
Query: 658 IKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
C + L + C Q +P +RP+ ++
Sbjct: 251 -NCPDMLFELMRMCWQYNPKMRPSFLEI 277
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 423 GSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGF 482
G++ V + V + + ++ +K+ D + K E+ + H+N+V+ G
Sbjct: 17 GAAGEVQLAVNRVTEEAVAVKIVDMKRA----VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 483 CDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQI 538
EG + L ++ + G L F+ ++P + A Q+ G+++LH I
Sbjct: 73 RREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 539 IHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREFH 184
Query: 599 AN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 41/268 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 42 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 100
Query: 493 YKFLNNGTLASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCD 542
+ + G L S+L EN P + +A +IA G+ +L+ N + +H D
Sbjct: 101 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 157
Query: 543 IKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTIT 598
+ +N ++ + + +I DFG+ + + ++ +K G KG + SPE ++ T
Sbjct: 158 LAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMSPESLKDGVFT 212
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMND 657
DV+SFGV+L EI A L + + N + L ++EG + D
Sbjct: 213 TYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 257
Query: 658 IKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
C + L + C Q +P +RP+ ++
Sbjct: 258 -NCPDMLFELMRMCWQYNPKMRPSFLEI 284
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 183
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 183
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 13 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 70
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 71 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 123
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 182
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 41/268 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 39 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 97
Query: 493 YKFLNNGTLASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCD 542
+ + G L S+L EN P + +A +IA G+ +L+ N + +H D
Sbjct: 98 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 154
Query: 543 IKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTIT 598
+ +N ++ + + +I DFG+ + + ++ +K G KG + SPE ++ T
Sbjct: 155 LAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMSPESLKDGVFT 209
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMND 657
DV+SFGV+L EI A L + + N + L ++EG + D
Sbjct: 210 TYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 254
Query: 658 IKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
C + L + C Q +P +RP+ ++
Sbjct: 255 -NCPDMLFELMRMCWQYNPKMRPSFLEI 281
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 41/268 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 41 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 99
Query: 493 YKFLNNGTLASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCD 542
+ + G L S+L EN P + +A +IA G+ +L+ N + +H D
Sbjct: 100 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 156
Query: 543 IKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTIT 598
+ +N ++ + + +I DFG+ + + ++ +K G KG + SPE ++ T
Sbjct: 157 LAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMSPESLKDGVFT 211
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMND 657
DV+SFGV+L EI A L + + N + L ++EG + D
Sbjct: 212 TYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 256
Query: 658 IKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
C + L + C Q +P +RP+ ++
Sbjct: 257 -NCPDMLFELMRMCWQYNPKMRPSFLEI 283
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 72
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 184
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 183
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 41/268 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 70 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 128
Query: 493 YKFLNNGTLASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCD 542
+ + G L S+L EN P + +A +IA G+ +L+ N + +H D
Sbjct: 129 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 185
Query: 543 IKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTIT 598
+ +N ++ + + +I DFG+ + + ++ +K G KG + SPE ++ T
Sbjct: 186 LAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMSPESLKDGVFT 240
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMND 657
DV+SFGV+L EI A L + + N + L ++EG + D
Sbjct: 241 TYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 285
Query: 658 IKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
C + L + C Q +P +RP+ ++
Sbjct: 286 -NCPDMLFELMRMCWQYNPKMRPSFLEI 312
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 183
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 183
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 51 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 109
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH +++ NIL+ D + +I+DFGLA+L+ N+ A + A
Sbjct: 110 MAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 166
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 167 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 209
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 210 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 260
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 15 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYG 72
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 73 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 184
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNLRAN 518
F E ++ Q H+ LVRL + + ++ +++ NG+L FL +K N +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A QIA G+ + IH D++ NIL+ D + +I+DFGLA+L+ + A + A
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGA 170
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T T DV+SFG+LL EI++ + +
Sbjct: 171 KFPIKW--TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPG 213
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E + C E+L + C +E P RPT + +L
Sbjct: 214 MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG + L V + + + + + R D + K E+ + H+N+V+ G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAV-DCPENIKKEIXINKMLNHENVVKFYG 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLHVNCSSQ 537
EG + L ++ + G L F+ ++P + A Q+ G+++LH
Sbjct: 72 HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 124
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
I H DIKP+N+LLD+ N +ISDFGLA + N + + + GT YVA PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREF 183
Query: 598 TAN-VDVYSFGVLLLEIISCRKSFD 621
A VDV+S G++L +++ +D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 41/268 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 41 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 99
Query: 493 YKFLNNGTLASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCD 542
+ + G L S+L EN P + +A +IA G+ +L+ N + +H D
Sbjct: 100 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 156
Query: 543 IKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTIT 598
+ +N ++ + + +I DFG+ + + ++ +K G KG + SPE ++ T
Sbjct: 157 LAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMSPESLKDGVFT 211
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMND 657
DV+SFGV+L EI A L + + N + L ++EG + D
Sbjct: 212 TYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 256
Query: 658 IKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
C + L + C Q +P +RP+ ++
Sbjct: 257 -NCPDMLFELMRMCWQYNPKMRPSFLEI 283
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 36/262 (13%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
++ VK L + ++F+ E ++ H+++VR G C EG+ L+V++++ +G L
Sbjct: 44 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 103
Query: 504 FLF------------ENLKP---GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNI 548
FL E++ P G +A Q+A G+++L +H D+ +N
Sbjct: 104 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNC 160
Query: 549 LLDDYYNAQISDFGLAK-LLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFG 607
L+ +I DFG+++ + + + + + + + PE T DV+SFG
Sbjct: 161 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM--PPESILYRKFTTESDVWSFG 218
Query: 608 VLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMV 667
V+L EI + K Y + A DC G+ E C ++ +
Sbjct: 219 VVLWEIFTYGKQ------PWYQLSNTEAIDCITQGR---------ELERPRACPPEVYAI 263
Query: 668 SIWCIQEDPSLRPTMRKVSQML 689
C Q +P R +++ V L
Sbjct: 264 MRGCWQREPQQRHSIKDVHARL 285
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 43/269 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 48 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 106
Query: 493 YKFLNNGTLASFLFENLKPGW-----------NLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + G L S+L +L+P + +A +IA G+ +L+ N + +H
Sbjct: 107 MELMTRGDLKSYL-RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHR 162
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTI 597
D+ +N ++ + + +I DFG+ + + ++ +K G KG + SPE ++
Sbjct: 163 DLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMSPESLKDGVF 217
Query: 598 TANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMN 656
T DV+SFGV+L EI A L + + N + L ++EG +
Sbjct: 218 TTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKP 262
Query: 657 DIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
D C + L + C Q +P +RP+ ++
Sbjct: 263 D-NCPDMLFELMRMCWQYNPKMRPSFLEI 290
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 36/262 (13%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
++ VK L + ++F+ E ++ H+++VR G C EG+ L+V++++ +G L
Sbjct: 50 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 109
Query: 504 FLF------------ENLKP---GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNI 548
FL E++ P G +A Q+A G+++L +H D+ +N
Sbjct: 110 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNC 166
Query: 549 LLDDYYNAQISDFGLAK-LLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFG 607
L+ +I DFG+++ + + + + + + + PE T DV+SFG
Sbjct: 167 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW--MPPESILYRKFTTESDVWSFG 224
Query: 608 VLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMV 667
V+L EI + K Y + A DC G+ E C ++ +
Sbjct: 225 VVLWEIFTYGKQ------PWYQLSNTEAIDCITQGR---------ELERPRACPPEVYAI 269
Query: 668 SIWCIQEDPSLRPTMRKVSQML 689
C Q +P R +++ V L
Sbjct: 270 MRGCWQREPQQRHSIKDVHARL 291
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 41/268 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 35 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 93
Query: 493 YKFLNNGTLASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCD 542
+ + G L S+L EN P + +A +IA G+ +L+ N + +H D
Sbjct: 94 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 150
Query: 543 IKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTIT 598
+ +N + + + +I DFG+ + + ++ +K G KG + SPE ++ T
Sbjct: 151 LAARNCXVAEDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMSPESLKDGVFT 205
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMND 657
DV+SFGV+L EI A L + + N + L ++EG + D
Sbjct: 206 TYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 250
Query: 658 IKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
C + L+ + C Q +P +RP+ ++
Sbjct: 251 -NCPDMLLELMRMCWQYNPKMRPSFLEI 277
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 43/269 (15%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV++ T V +K ++ E+ EF NE ++ + ++VRLLG +GQ L++
Sbjct: 38 GVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 96
Query: 493 YKFLNNGTLASFLFENLKPGW-----------NLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + G L S+L +L+P + +A +IA G+ +L+ N + +H
Sbjct: 97 MELMTRGDLKSYL-RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHR 152
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTI 597
D+ +N ++ + + +I DFG+ + + ++ +K G KG + SPE ++
Sbjct: 153 DLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMSPESLKDGVF 207
Query: 598 TANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK-LDDLVEGDMEAMN 656
T DV+SFGV+L EI A L + + N + L ++EG +
Sbjct: 208 TTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQVLRFVMEGGLLDKP 252
Query: 657 DIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
D C + L + C Q +P +RP+ ++
Sbjct: 253 D-NCPDMLFELMRMCWQYNPKMRPSFLEI 280
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 175
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 176 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 221
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 222 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 10/233 (4%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F I T + ++ K + +NEV + Q H +++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKP-GWNLRANIAFQIARGLLHLHVNCSSQII 539
+ ++ LV + +NG + +L +KP N + QI G+L+LH S I+
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGIL 134
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA 599
H D+ N+LL N +I+DFGLA L + K + GT Y+ SPE S
Sbjct: 135 HRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYI-SPEIATRSAHGL 191
Query: 600 NVDVYSFGVLLLEIISCRKSFDIEMGEEY---AILTDWAFDCYRNGKLDDLVE 649
DV+S G + ++ R FD + + +L D+ + + + DL+
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIH 244
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 171
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 172 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 217
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 218 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 176 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 221
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 222 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 124/296 (41%), Gaps = 53/296 (17%)
Query: 422 LGSSVFVNFTL---VGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVV-------MIGQT 471
LG F + VG+ + + V V K+ + D +E +++V MIG+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEEDLSDLVSEMEMMKMIGK- 99
Query: 472 YHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI------------ 519
HKN++ LLG C + ++ ++ + G L +L PG +I
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 520 ----AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 213
Query: 576 KKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTD 633
KK G +PE + T DV+SFGVL+ EI + G Y I +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVE 266
Query: 634 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
F + G D C +L M+ C PS RPT +++ + L
Sbjct: 267 ELFKLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 23/245 (9%)
Query: 445 IVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASF 504
+ VK L + E EF E ++ + H NLV+LLG C ++ +F+ G L +
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 505 LFENLKPGWN--LRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFG 562
L E + N + +A QI+ + +L IH D+ +N L+ + + +++DFG
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 563 LAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDI 622
L++L+T + A A K +PE + + DV++FGVLL EI +
Sbjct: 162 LSRLMTGDTYTAHAGAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 212
Query: 623 EMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTM 682
Y + D ++ +L+E D C EK+ + C Q +PS RP+
Sbjct: 213 -----YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 264
Query: 683 RKVSQ 687
++ Q
Sbjct: 265 AEIHQ 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 176 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 221
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 222 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 26/233 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 58 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 118 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 174
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDW 634
A K +PE + + DV++FGVLL EI + S I++ + Y
Sbjct: 175 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 226
Query: 635 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
+L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 227 -----------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 171
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 172 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 217
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 218 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 126
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 127 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 183
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 184 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 229
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 230 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 277
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 172
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 173 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 218
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 219 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 45/292 (15%)
Query: 422 LGSSVFVNFTL---VGVIQTSTRTTVIVVKKL--DRVFQDGEKEFKNEVVMIGQT-YHKN 475
LG F + VG+ + + V V K+ D + + +E+ M+ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI---------------- 519
++ LLG C + ++ ++ + G L +L PG +I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N KK
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXXKKTT 217
Query: 580 RGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFD 637
G +PE + T DV+SFGVL+ EI + G Y I + F
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFK 270
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ G D C +L M+ C PS RPT +++ + L
Sbjct: 271 LLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 26/233 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDW 634
A K +PE + + DV++FGVLL EI + S I++ + Y
Sbjct: 171 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 222
Query: 635 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
+L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 223 -----------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 45/292 (15%)
Query: 422 LGSSVFVNFTL---VGVIQTSTRTTVIVVKKL--DRVFQDGEKEFKNEVVMIGQT-YHKN 475
LG F + VG+ + + V V K+ D + + +E+ M+ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI---------------- 519
++ LLG C + ++ ++ + G L +L PG +I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N KK
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXXKKTT 217
Query: 580 RGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFD 637
G +PE + T DV+SFGVL+ EI + G Y I + F
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFK 270
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ G D C +L M+ C PS RPT +++ + L
Sbjct: 271 LLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 171 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 216
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 217 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 23/246 (9%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L + E EF E ++ + H NLV+LLG C ++ +F+ G L
Sbjct: 286 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 344
Query: 504 FLFENLKPGWN--LRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDF 561
+L E + N + +A QI+ + +L IH ++ +N L+ + + +++DF
Sbjct: 345 YLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADF 401
Query: 562 GLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
GL++L+T + A A K +PE + + DV++FGVLL EI +
Sbjct: 402 GLSRLMTGDTYTAHAGAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------ 453
Query: 622 IEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPT 681
Y + D ++ +L+E D C EK+ + C Q +PS RP+
Sbjct: 454 ------YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 504
Query: 682 MRKVSQ 687
++ Q
Sbjct: 505 FAEIHQ 510
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 172
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 173 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 218
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 219 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN--LR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + N +
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 172
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 173 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 218
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 219 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 45/292 (15%)
Query: 422 LGSSVFVNFTL---VGVIQTSTRTTVIVVKKL--DRVFQDGEKEFKNEVVMIGQT-YHKN 475
LG F + VG+ + + V V K+ D + + +E+ M+ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI---------------- 519
++ LLG C + ++ ++ + G L +L PG +I
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N KK
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 580 RGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFD 637
G +PE + T DV+SFGVL+ EI + G Y I + F
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFK 270
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ G D C +L M+ C PS RPT +++ + L
Sbjct: 271 LLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 23/246 (9%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L + E EF E ++ + H NLV+LLG C ++ +F+ G L
Sbjct: 244 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 302
Query: 504 FLFENLKPGWN--LRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDF 561
+L E + N + +A QI+ + +L IH ++ +N L+ + + +++DF
Sbjct: 303 YLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADF 359
Query: 562 GLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
GL++L+T + A A K +PE + + DV++FGVLL EI +
Sbjct: 360 GLSRLMTGDTYTAHAGAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------ 411
Query: 622 IEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPT 681
Y + D ++ +L+E D C EK+ + C Q +PS RP+
Sbjct: 412 ------YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 462
Query: 682 MRKVSQ 687
++ Q
Sbjct: 463 FAEIHQ 468
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFE--NLKPGWNLR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + S +
Sbjct: 169 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PY 211
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 212 PGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 34/261 (13%)
Query: 445 IVVKKLDRVFQDGEKE-FKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VK L EKE +E+ +M H+N+V LLG C G L++ ++ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 503 SFLFENLKPGWNLRANIAFQIA------RGLLHLHVN--------CSSQIIHCDIKPQNI 548
+FL + L + AF IA R LLH S IH D+ +N+
Sbjct: 139 NFLRRKSRV---LETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 549 LLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGV 608
LL + + A+I DFGLA+ + + + +K R ++A PE + T DV+S+G+
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA-PESIFDCVYTVQSDVWSYGI 254
Query: 609 LLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVS 668
LL EI F + + IL N K LV+ + + + +
Sbjct: 255 LLWEI------FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIM 300
Query: 669 IWCIQEDPSLRPTMRKVSQML 689
C +P+ RPT +++ L
Sbjct: 301 QACWALEPTHRPTFQQICSFL 321
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ +FL G+L
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL 103
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 104 REYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 160
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 161 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 120/295 (40%), Gaps = 51/295 (17%)
Query: 422 LGSSVFVNFTLVGVI----QTSTRTTVIVVKKL-----DRVFQDGEKEFKNEVVMIGQTY 472
LG F L I R T + VK L ++ D E + + MIG+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-MKMIGK-- 92
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN-------------- 518
HKN++ LLG C + ++ ++ + G L +L PG N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 519 --IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ ++ K
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDXXK 207
Query: 577 KAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 634
K G +PE + T DV+SFGVLL EI + G Y + +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 260
Query: 635 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
F + G D C +L M+ C PS RPT +++ + L
Sbjct: 261 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 39/245 (15%)
Query: 460 EFKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FEN---- 508
EF NE VM G T H ++VRLLG +GQ L+V + + +G L S+L EN
Sbjct: 66 EFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 509 LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLT 568
P +A +IA G+ +L+ + + +H D+ +N ++ + +I DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--D 179
Query: 569 LNQSKAIKKAIRGTKGYVA----SPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEM 624
+ ++ +K G KG + +PE ++ T + D++SFGV+L EI S
Sbjct: 180 IXETDXXRK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 227
Query: 625 GEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRK 684
L + + N ++ V C E++ + C Q +P++RPT +
Sbjct: 228 ------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLE 281
Query: 685 VSQML 689
+ +L
Sbjct: 282 IVNLL 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 39/245 (15%)
Query: 460 EFKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FEN---- 508
EF NE VM G T H ++VRLLG +GQ L+V + + +G L S+L EN
Sbjct: 63 EFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 509 LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLT 568
P +A +IA G+ +L+ + + +H D+ +N ++ + +I DFG+ +
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--D 176
Query: 569 LNQSKAIKKAIRGTKGYVA----SPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEM 624
+ ++ +K G KG + +PE ++ T + D++SFGV+L EI S
Sbjct: 177 IXETDXXRK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 224
Query: 625 GEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRK 684
L + + N ++ V C E++ + C Q +P +RPT +
Sbjct: 225 ------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLE 278
Query: 685 VSQML 689
+ +L
Sbjct: 279 IVNLL 283
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 34/261 (13%)
Query: 445 IVVKKLDRVFQDGEKE-FKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VK L EKE +E+ +M H+N+V LLG C G L++ ++ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 503 SFLFENLKPGWNLRANIAFQIA------RGLLHLHVN--------CSSQIIHCDIKPQNI 548
+FL + L + AF IA R LLH S IH D+ +N+
Sbjct: 139 NFLRRKSRV---LETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 549 LLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGV 608
LL + + A+I DFGLA+ + + + +K R ++A PE + T DV+S+G+
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA-PESIFDCVYTVQSDVWSYGI 254
Query: 609 LLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVS 668
LL EI F + + IL N K LV+ + + + +
Sbjct: 255 LLWEI------FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIM 300
Query: 669 IWCIQEDPSLRPTMRKVSQML 689
C +P+ RPT +++ L
Sbjct: 301 QACWALEPTHRPTFQQICSFL 321
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 45/292 (15%)
Query: 422 LGSSVFVNFTL---VGVIQTSTRTTVIVVKKL--DRVFQDGEKEFKNEVVMIGQT-YHKN 475
LG F + VG+ + + V V K+ D + + +E+ M+ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI---------------- 519
++ LLG C + ++ ++ + G L +L PG +I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N KK
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR--DINNIDYYKKTT 217
Query: 580 RGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFD 637
G +PE + T DV+SFGVL+ EI + G Y I + F
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFK 270
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ G D C +L M+ C PS RPT +++ + L
Sbjct: 271 LLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 39/245 (15%)
Query: 460 EFKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FEN---- 508
EF NE VM G T H ++VRLLG +GQ L+V + + +G L S+L EN
Sbjct: 66 EFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 509 LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLT 568
P +A +IA G+ +L+ + + +H D+ +N ++ + +I DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--D 179
Query: 569 LNQSKAIKKAIRGTKGYVA----SPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEM 624
+ ++ +K G KG + +PE ++ T + D++SFGV+L EI S
Sbjct: 180 IXETDXXRK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 227
Query: 625 GEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRK 684
L + + N ++ V C E++ + C Q +P +RPT +
Sbjct: 228 ------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 685 VSQML 689
+ +L
Sbjct: 282 IVNLL 286
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 21/188 (11%)
Query: 443 TVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFC-DEGQNRL-LVYKFLNNGT 500
++ VK+L D +++F+ E+ ++ + +V+ G G+ L LV ++L +G
Sbjct: 37 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGC 96
Query: 501 LASFLFENLKPGWNLRANI--------AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD 552
L FL + RA + + QI +G+ +L S + +H D+ +NIL++
Sbjct: 97 LRDFLQRH-------RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVES 146
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLE 612
+ +I+DFGLAKLL L++ + + + + +PE ++ + DV+SFGV+L E
Sbjct: 147 EAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 206
Query: 613 IIS-CRKS 619
+ + C KS
Sbjct: 207 LFTYCDKS 214
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 120/295 (40%), Gaps = 51/295 (17%)
Query: 422 LGSSVFVNFTLVGVI----QTSTRTTVIVVKKL-----DRVFQDGEKEFKNEVVMIGQTY 472
LG F L I R T + VK L ++ D E + + MIG+
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-MKMIGK-- 133
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN-------------- 518
HKN++ LLG C + ++ ++ + G L +L PG N
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 519 --IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ ++ K
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 248
Query: 577 KAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 634
K G +PE + T DV+SFGVLL EI + G Y + +
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 301
Query: 635 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
F + G D C +L M+ C PS RPT +++ + L
Sbjct: 302 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 30/243 (12%)
Query: 452 RVFQD--GEKEFK---NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF 506
+V +D G + F+ + ++ IG H ++VRLLG C G + LV ++L G+L +
Sbjct: 66 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVR 124
Query: 507 ENLKP-GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAK 565
++ G L N QIA+G+ +L ++H ++ +N+LL Q++DFG+A
Sbjct: 125 QHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVAD 181
Query: 566 LLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMG 625
LL + + + + ++A E T DV+S+GV + E+++
Sbjct: 182 LLPPDDKQLLYSEAKTPIKWMAL-ESIHFGKYTHQSDVWSYGVTVWELMTFG-------A 233
Query: 626 EEYAILTDWAFDCYRNGKLDDLVE-GDMEAMNDIKCVEK-LVMVSIWCIQEDPSLRPTMR 683
E YA L R ++ DL+E G+ A I ++ +VMV W I E+ +RPT +
Sbjct: 234 EPYAGL--------RLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDEN--IRPTFK 283
Query: 684 KVS 686
+++
Sbjct: 284 ELA 286
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 62 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 121
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ +L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 122 IRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 178
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 179 ARDMYDKEXXSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 45/292 (15%)
Query: 422 LGSSVFVNFTL---VGVIQTSTRTTVIVVKKL--DRVFQDGEKEFKNEVVMIGQT-YHKN 475
LG F + VG+ + + V V K+ D + + +E+ M+ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI---------------- 519
++ LLG C + ++ ++ + G L +L PG +I
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N KK
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 580 RGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFD 637
G +PE + T DV+SFGVL+ EI + G Y I + F
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFK 270
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ G D C +L M+ C PS RPT +++ + L
Sbjct: 271 LLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 30/243 (12%)
Query: 452 RVFQD--GEKEFK---NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF 506
+V +D G + F+ + ++ IG H ++VRLLG C G + LV ++L G+L +
Sbjct: 48 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVR 106
Query: 507 ENLKP-GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAK 565
++ G L N QIA+G+ +L ++H ++ +N+LL Q++DFG+A
Sbjct: 107 QHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVAD 163
Query: 566 LLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMG 625
LL + + + + ++A E T DV+S+GV + E+++
Sbjct: 164 LLPPDDKQLLYSEAKTPIKWMAL-ESIHFGKYTHQSDVWSYGVTVWELMTFG-------A 215
Query: 626 EEYAILTDWAFDCYRNGKLDDLVE-GDMEAMNDIKCVE-KLVMVSIWCIQEDPSLRPTMR 683
E YA L R ++ DL+E G+ A I ++ +VMV W I E+ +RPT +
Sbjct: 216 EPYAGL--------RLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDEN--IRPTFK 265
Query: 684 KVS 686
+++
Sbjct: 266 ELA 268
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 120/295 (40%), Gaps = 51/295 (17%)
Query: 422 LGSSVFVNFTLVGVI----QTSTRTTVIVVKKL-----DRVFQDGEKEFKNEVVMIGQTY 472
LG F L I R T + VK L ++ D E + + MIG+
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-MKMIGK-- 81
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN-------------- 518
HKN++ LLG C + ++ ++ + G L +L PG N
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 519 --IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ ++ K
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 196
Query: 577 KAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 634
K G +PE + T DV+SFGVLL EI + G Y + +
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 249
Query: 635 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
F + G D C +L M+ C PS RPT +++ + L
Sbjct: 250 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFE--NLKPGWNLR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + S +
Sbjct: 169 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PY 211
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 212 PGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 467 MIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI------- 519
MIG+ HKN++ LLG C + ++ ++ + G L +L PG +I
Sbjct: 142 MIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 520 ---------AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLN 570
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N
Sbjct: 200 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 254
Query: 571 QSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY- 628
KK G +PE + T DV+SFGVL+ EI + G Y
Sbjct: 255 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYP 307
Query: 629 AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQM 688
I + F + G D C +L M+ C PS RPT +++ +
Sbjct: 308 GIPVEELFKLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358
Query: 689 L 689
L
Sbjct: 359 L 359
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 467 MIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI------- 519
MIG+ HKN++ LLG C + ++ ++ + G L +L PG +I
Sbjct: 85 MIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 520 ---------AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLN 570
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N
Sbjct: 143 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DIN 197
Query: 571 QSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY- 628
KK G +PE + T DV+SFGVL+ EI + G Y
Sbjct: 198 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYP 250
Query: 629 AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQM 688
I + F + G D C +L M+ C PS RPT +++ +
Sbjct: 251 GIPVEELFKLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 301
Query: 689 L 689
L
Sbjct: 302 L 302
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 45/292 (15%)
Query: 422 LGSSVFVNFTL---VGVIQTSTRTTVIVVKKL--DRVFQDGEKEFKNEVVMIGQT-YHKN 475
LG F + VG+ + + V V K+ D + + +E+ M+ HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI---------------- 519
++ LLG C + ++ ++ + G L +L PG +I
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N KK
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 209
Query: 580 RGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFD 637
G +PE + T DV+SFGVL+ EI + G Y I + F
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFK 262
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ G D C +L M+ C PS RPT +++ + L
Sbjct: 263 LLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 32/258 (12%)
Query: 445 IVVKKLDRVFQDGEKE-FKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VK L EKE +E+ +M H+N+V LLG C G L++ ++ G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 503 SFLF---------ENLKPGWNLRANIAF--QIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
+FL E+ +P LR + F Q+A+G+ L S IH D+ +N+LL
Sbjct: 131 NFLRRKAEADLDKEDGRP-LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 186
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLL 611
+ + A+I DFGLA+ + + + +K R ++A PE + T DV+S+G+LL
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA-PESIFDCVYTVQSDVWSYGILLW 245
Query: 612 EIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWC 671
EI F + + IL N K LV+ + + + + C
Sbjct: 246 EI------FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQAC 291
Query: 672 IQEDPSLRPTMRKVSQML 689
+P+ RPT +++ L
Sbjct: 292 WALEPTHRPTFQQICSFL 309
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFE--NLKPGWNLR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 176 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 221
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 222 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 46/273 (16%)
Query: 443 TVIVVKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
T + VK L E ++ +E ++ Q H ++++L G C + LL+ ++ G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 502 ASFLFENLK--PGW---------------NLRA-------NIAFQIARGLLHLHVNCSSQ 537
FL E+ K PG+ + RA + A+QI++G+ +L +
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMK 170
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
++H D+ +NIL+ + +ISDFGL++ + S + R ++A F +
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF-DHIY 229
Query: 598 TANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYRNGKLDDLVEGDMEAMN 656
T DV+SFGVLL EI++ G Y I + F+ + G ME +
Sbjct: 230 TTQSDVWSFGVLLWEIVTLG-------GNPYPGIPPERLFNLLKTGH-------RMERPD 275
Query: 657 DIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ C E++ + + C +++P RP +S+ L
Sbjct: 276 N--CSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 116/253 (45%), Gaps = 22/253 (8%)
Query: 441 RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
R + +K L + + ++ +F +E ++GQ H N++ L G + +++ +F+ NG
Sbjct: 60 REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENG 119
Query: 500 TLASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
+L SFL +N ++ + IA G+ +L +H D+ +NIL++ ++
Sbjct: 120 SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKV 176
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIISC 616
SDFGL++ L + S + G K + +PE + T+ DV+S+G+++ E++S
Sbjct: 177 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS- 235
Query: 617 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDP 676
Y W N + + +E D + C L + + C Q+D
Sbjct: 236 -----------YGERPYWDM---TNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDR 281
Query: 677 SLRPTMRKVSQML 689
+ RP ++ L
Sbjct: 282 NHRPKFGQIVNTL 294
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 36/260 (13%)
Query: 441 RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
+ + + +K L + + ++ EF +E ++GQ H N++RL G +++ +F+ NG
Sbjct: 43 KESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENG 102
Query: 500 TLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY 553
L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 103 ALDSFLRLNDGQFTVIQLVGMLRG-----IASGMRYL---AEMSYVHRDLAARNILVNSN 154
Query: 554 YNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLL 611
++SDFGL++ L N S + + G K + +PE T+ D +S+G+++
Sbjct: 155 LVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMW 214
Query: 612 EIISC--RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
E++S R +D+ N + + +E D C L + +
Sbjct: 215 EVMSFGERPYWDMS-----------------NQDVINAIEQDYRLPPPPDCPTSLHQLML 257
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP +V L
Sbjct: 258 DCWQKDRNARPRFPQVVSAL 277
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 467 MIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI------- 519
MIG+ HKN++ LLG C + ++ ++ + G L +L PG +I
Sbjct: 83 MIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 520 ---------AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLN 570
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N
Sbjct: 141 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR--DIN 195
Query: 571 QSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY- 628
KK G +PE + T DV+SFGVL+ EI + G Y
Sbjct: 196 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYP 248
Query: 629 AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQM 688
I + F + G D C +L M+ C PS RPT +++ +
Sbjct: 249 GIPVEELFKLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 299
Query: 689 L 689
L
Sbjct: 300 L 300
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 120/295 (40%), Gaps = 51/295 (17%)
Query: 422 LGSSVFVNFTLVGVI----QTSTRTTVIVVKKL-----DRVFQDGEKEFKNEVVMIGQTY 472
LG F L I R T + VK L ++ D E + + MIG+
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-MKMIGK-- 84
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN-------------- 518
HKN++ LLG C + ++ ++ + G L +L PG N
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 519 --IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ ++ K
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 199
Query: 577 KAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 634
K G +PE + T DV+SFGVLL EI + G Y + +
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 252
Query: 635 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
F + G D C +L M+ C PS RPT +++ + L
Sbjct: 253 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 45/292 (15%)
Query: 422 LGSSVFVNFTL---VGVIQTSTRTTVIVVKKL--DRVFQDGEKEFKNEVVMIGQT-YHKN 475
LG F + VG+ + + V V K+ D + + +E+ M+ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI---------------- 519
++ LLG C + ++ + + G L +L PG +I
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N KK
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 580 RGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFD 637
G +PE + T DV+SFGVL+ EI + G Y I + F
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFK 270
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ G D C +L M+ C PS RPT +++ + L
Sbjct: 271 LLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 120/295 (40%), Gaps = 51/295 (17%)
Query: 422 LGSSVFVNFTLVGVI----QTSTRTTVIVVKKL-----DRVFQDGEKEFKNEVVMIGQTY 472
LG F L I R T + VK L ++ D E + + MIG+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-MKMIGK-- 92
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN-------------- 518
HKN++ LLG C + ++ ++ + G L +L PG N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 519 --IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ ++ K
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 207
Query: 577 KAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 634
K G +PE + T DV+SFGVLL EI + G Y + +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 260
Query: 635 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
F + G D C +L M+ C PS RPT +++ + L
Sbjct: 261 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 120/295 (40%), Gaps = 51/295 (17%)
Query: 422 LGSSVFVNFTLVGVI----QTSTRTTVIVVKKL-----DRVFQDGEKEFKNEVVMIGQTY 472
LG F L I R T + VK L ++ D E + + MIG+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-MKMIGK-- 92
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN-------------- 518
HKN++ LLG C + ++ ++ + G L +L PG N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 519 --IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ ++ K
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 207
Query: 577 KAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 634
K G +PE + T DV+SFGVLL EI + G Y + +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 260
Query: 635 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
F + G D C +L M+ C PS RPT +++ + L
Sbjct: 261 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFE--NLKPGWNLR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 171 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 216
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 217 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 98/188 (52%), Gaps = 21/188 (11%)
Query: 443 TVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG--FCDEGQNRLLVYKFLNNGT 500
++ VK+L D +++F+ E+ ++ + +V+ G + Q+ LV ++L +G
Sbjct: 40 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 99
Query: 501 LASFLFENLKPGWNLRANI--------AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD 552
L FL + RA + + QI +G+ +L S + +H D+ +NIL++
Sbjct: 100 LRDFLQRH-------RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVES 149
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLE 612
+ +I+DFGLAKLL L++ + + + + +PE ++ + DV+SFGV+L E
Sbjct: 150 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 209
Query: 613 IIS-CRKS 619
+ + C KS
Sbjct: 210 LFTYCDKS 217
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 32/258 (12%)
Query: 445 IVVKKLDRVFQDGEKE-FKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VK L EKE +E+ +M H+N+V LLG C G L++ ++ G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 503 SFLF---------ENLKPGWNLRANIAF--QIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
+FL E+ +P LR + F Q+A+G+ L S IH D+ +N+LL
Sbjct: 139 NFLRRKAEADLDKEDGRP-LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 194
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLL 611
+ + A+I DFGLA+ + + + +K R ++A PE + T DV+S+G+LL
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA-PESIFDCVYTVQSDVWSYGILLW 253
Query: 612 EIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWC 671
EI F + + IL N K LV+ + + + + C
Sbjct: 254 EI------FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQAC 299
Query: 672 IQEDPSLRPTMRKVSQML 689
+P+ RPT +++ L
Sbjct: 300 WALEPTHRPTFQQICSFL 317
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 98/188 (52%), Gaps = 21/188 (11%)
Query: 443 TVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG--FCDEGQNRLLVYKFLNNGT 500
++ VK+L D +++F+ E+ ++ + +V+ G + Q+ LV ++L +G
Sbjct: 41 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 100
Query: 501 LASFLFENLKPGWNLRANI--------AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD 552
L FL + RA + + QI +G+ +L S + +H D+ +NIL++
Sbjct: 101 LRDFLQRH-------RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVES 150
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLE 612
+ +I+DFGLAKLL L++ + + + + +PE ++ + DV+SFGV+L E
Sbjct: 151 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 210
Query: 613 IIS-CRKS 619
+ + C KS
Sbjct: 211 LFTYCDKS 218
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 127/289 (43%), Gaps = 41/289 (14%)
Query: 422 LGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLV 477
LG F + G+ +T+T TV V + + +E+ ++I +H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 478 RLLGFCDE-GQNRLLVYKFLNNGTLASFL------FENLKPG------WNLRANI--AFQ 522
LLG C + G +++ +F G L+++L F KP L I +FQ
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 523 IARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGT 582
+A+G+ L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 583 KGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 640
++A PE + T DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 214 LKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR 263
Query: 641 NGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
L EG D E + + C +PS RPT ++ + L
Sbjct: 264 ------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 27/277 (9%)
Query: 415 NVTRSVLLGSSVF-VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEK---EFKNEVVMIGQ 470
+ R +LGS F + + V + T + +K L+ G K EF +E +++
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET--TGPKANVEFMDEALIMAS 96
Query: 471 TYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRANIAFQIARGLLH 529
H +LVRLLG C +L V + + +G L ++ E+ G L N QIA+G+++
Sbjct: 97 MDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 155
Query: 530 LHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
L +++H D+ +N+L+ + +I+DFGLA+LL ++ + + ++A
Sbjct: 156 LE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL- 211
Query: 590 EWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVE 649
E T DV+S+GV + E+++ +D ++ DL+E
Sbjct: 212 ECIHYRKFTHQSDVWSYGVTIWELMT---------------FGGKPYDGIPTREIPDLLE 256
Query: 650 GDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVS 686
C + MV + C D RP ++++
Sbjct: 257 KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELA 293
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFE--NLKPGWNLR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 171 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 216
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 217 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 120/295 (40%), Gaps = 51/295 (17%)
Query: 422 LGSSVFVNFTLVGVI----QTSTRTTVIVVKKL-----DRVFQDGEKEFKNEVVMIGQTY 472
LG F L I R T + VK L ++ D E + + MIG+
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-MKMIGK-- 85
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN-------------- 518
HKN++ LLG C + ++ ++ + G L +L PG N
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 519 --IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ ++ K
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 200
Query: 577 KAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 634
K G +PE + T DV+SFGVLL EI + G Y + +
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 253
Query: 635 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
F + G D C +L M+ C PS RPT +++ + L
Sbjct: 254 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 27/277 (9%)
Query: 415 NVTRSVLLGSSVF-VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEK---EFKNEVVMIGQ 470
+ R +LGS F + + V + T + +K L+ G K EF +E +++
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET--TGPKANVEFMDEALIMAS 73
Query: 471 TYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRANIAFQIARGLLH 529
H +LVRLLG C +L V + + +G L ++ E+ G L N QIA+G+++
Sbjct: 74 MDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 132
Query: 530 LHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
L +++H D+ +N+L+ + +I+DFGLA+LL ++ + + ++A
Sbjct: 133 LE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL- 188
Query: 590 EWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVE 649
E T DV+S+GV + E+++ G+ Y D ++ DL+E
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMTFG-------GKPY--------DGIPTREIPDLLE 233
Query: 650 GDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVS 686
C + MV + C D RP ++++
Sbjct: 234 KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELA 270
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 98/188 (52%), Gaps = 21/188 (11%)
Query: 443 TVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG--FCDEGQNRLLVYKFLNNGT 500
++ VK+L D +++F+ E+ ++ + +V+ G + Q+ LV ++L +G
Sbjct: 53 ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 112
Query: 501 LASFLFENLKPGWNLRANI--------AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD 552
L FL + RA + + QI +G+ +L S + +H D+ +NIL++
Sbjct: 113 LRDFLQRH-------RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVES 162
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLE 612
+ +I+DFGLAKLL L++ + + + + +PE ++ + DV+SFGV+L E
Sbjct: 163 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 222
Query: 613 IIS-CRKS 619
+ + C KS
Sbjct: 223 LFTYCDKS 230
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFE--NLKPGWNLR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 171 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 216
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 217 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFE--NLKPGWNLR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+T + A
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 636
A K +PE + + DV++FGVLL EI + Y +
Sbjct: 171 GAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGI 216
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 217 DL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 45/292 (15%)
Query: 422 LGSSVFVNFTL---VGVIQTSTRTTVIVVKKL--DRVFQDGEKEFKNEVVMIGQT-YHKN 475
LG F + VG+ + + V V K+ D + + +E+ M+ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI---------------- 519
++ LLG C + ++ + + G L +L PG +I
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N KK
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 580 RGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFD 637
G +PE + T DV+SFGVL+ EI + G Y I + F
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFK 270
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ G D C +L M+ C PS RPT +++ + L
Sbjct: 271 LLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 23/246 (9%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L + E EF E ++ + H NLV+LLG C ++ +F+ G L
Sbjct: 247 TVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 305
Query: 504 FLFE--NLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDF 561
+L E + + +A QI+ + +L IH ++ +N L+ + + +++DF
Sbjct: 306 YLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADF 362
Query: 562 GLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
GL++L+T + A A K +PE + + DV++FGVLL EI +
Sbjct: 363 GLSRLMTGDTYTAHAGAKFPIKW--TAPESLAYNKFSIKSDVWAFGVLLWEIAT------ 414
Query: 622 IEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPT 681
Y + D ++ +L+E D C EK+ + C Q +PS RP+
Sbjct: 415 ------YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 465
Query: 682 MRKVSQ 687
++ Q
Sbjct: 466 FAEIHQ 471
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 28/234 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFE--NLKPGWNLR 516
+EF E ++ + H NLV+LLG C ++ +F+ G L +L E + +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLL---TLNQSK 573
+A QI+ + +L IH D+ +N L+ + + +++DFGL++L+ T
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHA 168
Query: 574 AIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 633
K I+ T +PE + + DV++FGVLL EI + S
Sbjct: 169 GAKFPIKWT-----APESLAYNKFSIKSDVWAFGVLLWEIATYGMS-------------- 209
Query: 634 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
+ ++ +L+E D C EK+ + C Q +PS RP+ ++ Q
Sbjct: 210 -PYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 48 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 107
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 108 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 164
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 165 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 72 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 132 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 188
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 189 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 104 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 160
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 161 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGYVHRDLAARNILIN 181
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGLA++L + A RG K + SPE T+ DV+S+G++
Sbjct: 182 SNLVCKVSDFGLARVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 284
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 81 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 140
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ +L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 141 IRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 197
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 198 ARDMYDKEYYSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 40/263 (15%)
Query: 443 TVIVVKKLDRVFQDGEK-EFKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGT 500
T + VK ++ E+ EF NE VM G T H ++VRLLG +GQ L+V + + +G
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 501 LASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
L S+L EN P +A +IA G+ +L+ + + +H D+ +N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMV 163
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTITANVDVYSF 606
+ +I DFG+ + + ++ +K G KG + +PE ++ T + D++SF
Sbjct: 164 AHDFTVKIGDFGMTR--DIYETAYYRK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSF 218
Query: 607 GVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVM 666
GV+L EI S L + + N ++ V C E++
Sbjct: 219 GVVLWEITS---------------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTD 263
Query: 667 VSIWCIQEDPSLRPTMRKVSQML 689
+ C Q +P +RPT ++ +L
Sbjct: 264 LMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 46/273 (16%)
Query: 443 TVIVVKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
T + VK L E ++ +E ++ Q H ++++L G C + LL+ ++ G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 502 ASFLFENLK--PGW---------------NLRA-------NIAFQIARGLLHLHVNCSSQ 537
FL E+ K PG+ + RA + A+QI++G+ +L
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMS 170
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
++H D+ +NIL+ + +ISDFGL++ + S + R ++A F +
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF-DHIY 229
Query: 598 TANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYRNGKLDDLVEGDMEAMN 656
T DV+SFGVLL EI++ G Y I + F+ + G ME +
Sbjct: 230 TTQSDVWSFGVLLWEIVTLG-------GNPYPGIPPERLFNLLKTGH-------RMERPD 275
Query: 657 DIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ C E++ + + C +++P RP +S+ L
Sbjct: 276 N--CSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 39 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 98
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 99 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 155
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 156 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 101 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 157
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 158 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 46/273 (16%)
Query: 443 TVIVVKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
T + VK L E ++ +E ++ Q H ++++L G C + LL+ ++ G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 502 ASFLFENLK--PGW---------------NLRA-------NIAFQIARGLLHLHVNCSSQ 537
FL E+ K PG+ + RA + A+QI++G+ +L +
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMK 170
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
++H D+ +NIL+ + +ISDFGL++ + S + R ++A F +
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF-DHIY 229
Query: 598 TANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYRNGKLDDLVEGDMEAMN 656
T DV+SFGVLL EI++ G Y I + F+ + G ME +
Sbjct: 230 TTQSDVWSFGVLLWEIVTLG-------GNPYPGIPPERLFNLLKTGH-------RMERPD 275
Query: 657 DIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ C E++ + + C +++P RP +S+ L
Sbjct: 276 N--CSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 46 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 106 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 162
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 163 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 39/245 (15%)
Query: 460 EFKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FEN---- 508
EF NE VM G T H ++VRLLG +GQ L+V + + +G L S+L EN
Sbjct: 65 EFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 123
Query: 509 LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLT 568
P +A +IA G+ +L+ + + +H D+ +N ++ + +I DFG+ +
Sbjct: 124 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--D 178
Query: 569 LNQSKAIKKAIRGTKGYVA----SPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEM 624
+ ++ +K G KG + +PE ++ T + D++SFGV+L EI S
Sbjct: 179 IYETDYYRK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 226
Query: 625 GEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRK 684
L + + N ++ V C E++ + C Q +P +RPT +
Sbjct: 227 ------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLE 280
Query: 685 VSQML 689
+ +L
Sbjct: 281 IVNLL 285
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 47 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 106
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 107 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 163
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 164 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 40 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 100 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 156
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 157 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 39/245 (15%)
Query: 460 EFKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FEN---- 508
EF NE VM G T H ++VRLLG +GQ L+V + + +G L S+L EN
Sbjct: 66 EFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 509 LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLT 568
P +A +IA G+ +L+ + + +H D+ +N ++ + +I DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--D 179
Query: 569 LNQSKAIKKAIRGTKGYVA----SPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEM 624
+ ++ +K G KG + +PE ++ T + D++SFGV+L EI S
Sbjct: 180 IYETDYYRK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 227
Query: 625 GEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRK 684
L + + N ++ V C E++ + C Q +P +RPT +
Sbjct: 228 ------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 685 VSQML 689
+ +L
Sbjct: 282 IVNLL 286
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 411 RNMMNVTRSVLLGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-V 466
R+ +N+ + LG F + G+ +T+T TV V + + +E+ +
Sbjct: 26 RDRLNLGKP--LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKI 83
Query: 467 MIGQTYHKNLVRLLGFCDE-GQNRLLVYKFLNNGTLASFL---------FENLKPGWNLR 516
+I +H N+V LLG C + G +++ +F G L+++L +++L +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 517 ANI---AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK 573
++ +FQ+A+G+ L S + IH D+ +NILL + +I DFGLA+ + +
Sbjct: 144 EHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 200
Query: 574 AIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAIL 631
K R ++A PE + T DV+SFGVLL EI S S +++ EE+
Sbjct: 201 VRKGDARLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--- 256
Query: 632 TDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
C R L EG D E + + C +PS RPT ++ + L
Sbjct: 257 ------CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 60 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 119
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ +L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 120 IRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 176
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 177 ARDMYDKEYYSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 82 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 141
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ +L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 142 IRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 198
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 199 ARDMYDKEYYSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 101 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 157
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 158 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 55 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 114
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ +L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 115 IRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 171
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 172 ARDMYDKEYYSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 45 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 105 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 161
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 162 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 58 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 117
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ +L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 118 IRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 174
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 175 ARDMYDKEYYSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 61 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 120
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ +L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 121 IRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 177
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 178 ARDMYDKEYYSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 119 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 175
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 176 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ +L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 123 IRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 179
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 180 ARDMYDKEYYSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 44/301 (14%)
Query: 411 RNMMNVTRSVLLGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-V 466
R+ +N+ + LG F + G+ +T+T TV V + + +E+ +
Sbjct: 27 RDRLNLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 84
Query: 467 MIGQTYHKNLVRLLGFCDE-GQNRLLVYKFLNNGTLASFL------FENLKPGWNLRANI 519
+I +H N+V LLG C + G +++ +F G L+++L F K +L +
Sbjct: 85 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF 144
Query: 520 ---------AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLN 570
+FQ+A+G+ L S + IH D+ +NILL + +I DFGLA+ + +
Sbjct: 145 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 571 QSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKS--FDIEMGEEY 628
K R ++A PE + T DV+SFGVLL EI S S +++ EE+
Sbjct: 202 PDXVRKGDARLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260
Query: 629 AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQM 688
C R L EG D E + + C +PS RPT ++ +
Sbjct: 261 ---------CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEH 304
Query: 689 L 689
L
Sbjct: 305 L 305
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L + + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 104 RDYLQAHAERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 160
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 161 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 119 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 175
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 176 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 62 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 121
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ +L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 122 IRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 178
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 179 ARDMYDKEYYSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ +L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 123 IRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 179
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 180 ARDMYDKEYYSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 122/295 (41%), Gaps = 51/295 (17%)
Query: 422 LGSSVFVNFTLVGVI----QTSTRTTVIVVKKL-----DRVFQDGEKEFKNEVVMIGQTY 472
LG F L I R T + VK L ++ D E + + MIG+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-MKMIGK-- 92
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPG----WNLRAN---------- 518
HKN++ LLG C + ++ ++ + G L +L PG +N N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 519 --IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ ++ K
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 207
Query: 577 KAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 634
K G +PE + T DV+SFGVLL EI + G Y + +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 260
Query: 635 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
F + G D C +L M+ C PS RPT +++ + L
Sbjct: 261 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRL 479
++G F + + R + + + +D ++F E+ V+ +H N++ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 480 LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIA---------RGLLHL 530
LG C+ L ++ +G L FL + L + AF IA + LLH
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 531 HVNCS--------SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGT 582
+ + Q IH D+ +NIL+ + Y A+I+DFGL++ Q +KK +
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRL 203
Query: 583 KGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ E S T N DV+S+GVLL EI+S
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 36/260 (13%)
Query: 441 RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
+ + + +K L + + ++ EF +E ++GQ H N++RL G +++ +F+ NG
Sbjct: 41 KESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENG 100
Query: 500 TLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY 553
L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 101 ALDSFLRLNDGQFTVIQLVGMLRG-----IASGMRYL---AEMSYVHRDLAARNILVNSN 152
Query: 554 YNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLL 611
++SDFGL++ L N S + G K + +PE T+ D +S+G+++
Sbjct: 153 LVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMW 212
Query: 612 EIISC--RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
E++S R +D+ N + + +E D C L + +
Sbjct: 213 EVMSFGERPYWDMS-----------------NQDVINAIEQDYRLPPPPDCPTSLHQLML 255
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP +V L
Sbjct: 256 DCWQKDRNARPRFPQVVSAL 275
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRL 479
++G F + + R + + + +D ++F E+ V+ +H N++ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 480 LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIA---------RGLLHL 530
LG C+ L ++ +G L FL + L + AF IA + LLH
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 531 HVNCS--------SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGT 582
+ + Q IH D+ +NIL+ + Y A+I+DFGL++ Q +KK +
Sbjct: 138 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRL 193
Query: 583 KGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ E S T N DV+S+GVLL EI+S
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGFVHRDLAARNILIN 181
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL+++L + A RG K + SPE T+ DV+S+G++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 284
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 122/295 (41%), Gaps = 51/295 (17%)
Query: 422 LGSSVFVNFTLVGVI----QTSTRTTVIVVKKL-----DRVFQDGEKEFKNEVVMIGQTY 472
LG F L I R T + VK L ++ D E + + MIG+
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM-MKMIGK-- 77
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPG----WNLRAN---------- 518
HKN++ LLG C + ++ ++ + G L +L PG +N N
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 519 --IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ ++ K
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 192
Query: 577 KAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 634
K G +PE + T DV+SFGVLL EI + G Y + +
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 245
Query: 635 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
F + G D C +L M+ C PS RPT +++ + L
Sbjct: 246 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 122 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 181
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 182 IRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 238
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 239 ARDMYDKEFDSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNL 515
E++F E ++ + H LV+L G C E LV++F+ +G L+ +L L L
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 105
Query: 516 RANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + G+ +L C +IH D+ +N L+ + ++SDFG+ + + +Q +
Sbjct: 106 -LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 576 KKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
GTK V ASPE F S ++ DV+SFGVL+ E+ S
Sbjct: 162 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGYVHRDLAARNILIN 181
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL+++L + A RG K + SPE T+ DV+S+G++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 284
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 119/292 (40%), Gaps = 45/292 (15%)
Query: 422 LGSSVFVNFTL---VGVIQTSTRTTVIVVKKL--DRVFQDGEKEFKNEVVMIGQT-YHKN 475
LG F + VG+ + + V V K+ D + + +E+ M+ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI---------------- 519
++ LLG C + ++ ++ + G L +L PG +I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+Q+ARG+ +L S + IH D+ +N+L+ + +I+DFGLA+ +N K
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKNTT 217
Query: 580 RGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFD 637
G +PE + T DV+SFGVL+ EI + G Y I + F
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFK 270
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ G D C +L M+ C PS RPT +++ + L
Sbjct: 271 LLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGYVHRDLAARNILIN 181
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL+++L + A RG K + SPE T+ DV+S+G++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 284
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGYVHRDLAARNILIN 181
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL+++L + A RG K + SPE T+ DV+S+G++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 284
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNL 515
E++F E ++ + H LV+L G C E LV++F+ +G L+ +L L L
Sbjct: 49 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 108
Query: 516 RANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + G+ +L C +IH D+ +N L+ + ++SDFG+ + + +Q +
Sbjct: 109 -LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164
Query: 576 KKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
GTK V ASPE F S ++ DV+SFGVL+ E+ S
Sbjct: 165 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 118/270 (43%), Gaps = 43/270 (15%)
Query: 445 IVVKKLDRVFQDGEKE-FKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VK L EKE +E+ +M H+N+V LLG C G L++ ++ G L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 503 SFLFE--------NLKPGWN-------------LRANIAF--QIARGLLHLHVNCSSQII 539
+FL +L PG + LR + F Q+A+G+ L S I
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCI 180
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA 599
H D+ +N+LL + + A+I DFGLA+ + + + +K R ++A PE + T
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA-PESIFDCVYTV 239
Query: 600 NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 659
DV+S+G+LL EI F + + IL N K LV+ +
Sbjct: 240 QSDVWSYGILLWEI------FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAF 285
Query: 660 CVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ + + C +P+ RPT +++ L
Sbjct: 286 APKNIYSIMQACWALEPTHRPTFQQICSFL 315
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNL 515
E++F E ++ + H LV+L G C E LV++F+ +G L+ +L L L
Sbjct: 44 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 103
Query: 516 RANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + G+ +L C +IH D+ +N L+ + ++SDFG+ + + +Q +
Sbjct: 104 -LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 159
Query: 576 KKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
GTK V ASPE F S ++ DV+SFGVL+ E+ S
Sbjct: 160 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 64 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 123
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 124 IRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 180
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 181 ARDMLDKEFDSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGYVHRDLAARNILIN 181
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL+++L + A RG K + SPE T+ DV+S+G++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 284
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 68 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 127
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 128 IRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 184
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 185 ARDMYDKEFDSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 64 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 123
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 124 IRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 180
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 181 ARDMYDKEFDSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V +++
Sbjct: 68 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 127
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 128 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGYVHRDLAARNILIN 179
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL+++L + A RG K + SPE T+ DV+S+G++
Sbjct: 180 SNLVCKVSDFGLSRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 237
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 238 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 282
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 283 DCWQKDRNNRPKFEQIVSIL 302
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 123 IRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 179
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 180 ARDMYDKEFDSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 61 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 120
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 121 IRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 177
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 178 ARDMYDKEFDSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V +++
Sbjct: 58 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 117
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 118 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGYVHRDLAARNILIN 169
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL+++L + A RG K + SPE T+ DV+S+G++
Sbjct: 170 SNLVCKVSDFGLSRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 227
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 228 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 272
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 273 DCWQKDRNNRPKFEQIVSIL 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Query: 447 VKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQ-NRLLVYKFLNNGTLASF 504
VK L+R+ GE +F E +++ H N++ LLG C + + L+V ++ +G L +F
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 505 LF-ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
+ E P Q+A+G+ L S + +H D+ +N +LD+ + +++DFGL
Sbjct: 123 IRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 179
Query: 564 AKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
A+ + + ++ G K V + E + T DV+SFGVLL E+++
Sbjct: 180 ARDMYDKEFDSVHNKT-GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGYVHRDLAARNILIN 181
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL ++L + A RG K + SPE T+ DV+S+G++
Sbjct: 182 SNLVCKVSDFGLGRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 284
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 40/263 (15%)
Query: 443 TVIVVKKLDRVFQDGEK-EFKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGT 500
T + VK ++ E+ EF NE VM G T H ++VRLLG +GQ L+V + + +G
Sbjct: 49 TRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGD 107
Query: 501 LASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
L S+L EN P +A +IA G+ +L+ + + +H ++ +N ++
Sbjct: 108 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMV 164
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTITANVDVYSF 606
+ +I DFG+ + + ++ +K G KG + +PE ++ T + D++SF
Sbjct: 165 AHDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSF 219
Query: 607 GVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVM 666
GV+L EI S L + + N ++ V C E++
Sbjct: 220 GVVLWEITS---------------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTD 264
Query: 667 VSIWCIQEDPSLRPTMRKVSQML 689
+ C Q +P++RPT ++ +L
Sbjct: 265 LMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V +++
Sbjct: 41 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 100
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 101 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGYVHRDLAARNILIN 152
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL+++L + A RG K + SPE T+ DV+S+G++
Sbjct: 153 SNLVCKVSDFGLSRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 210
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 211 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 255
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 256 DCWQKDRNNRPKFEQIVSIL 275
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH D+ +NIL+++ +I D
Sbjct: 101 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGD 157
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 158 FGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNL 515
E +F E ++ + H LV+L G C E LV++F+ +G L+ +L L L
Sbjct: 66 EDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 125
Query: 516 RANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + G+ +L C +IH D+ +N L+ + ++SDFG+ + + +Q +
Sbjct: 126 -LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 181
Query: 576 KKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
GTK V ASPE F S ++ DV+SFGVL+ E+ S
Sbjct: 182 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 47/301 (15%)
Query: 411 RNMMNVTRSVLLGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-V 466
R+ +N+ + LG F + G+ +T+T TV V + + +E+ +
Sbjct: 26 RDRLNLGKP--LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKI 83
Query: 467 MIGQTYHKNLVRLLGFCDE-GQNRLLVYKFLNNGTLASFL---------FENLKPGWNLR 516
+I +H N+V LLG C + G +++ +F G L+++L +++L +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 517 ANI---AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK 573
++ +FQ+A+G+ L S + IH D+ +NILL + +I DFGLA+ + +
Sbjct: 144 EHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY 200
Query: 574 AIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 633
K R ++A PE + T DV+SFGVLL EI S S
Sbjct: 201 VRKGDARLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-------------- 245
Query: 634 WAFDCYRNGKLDD-----LVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQM 688
Y K+D+ L EG D E + + C +PS RPT ++ +
Sbjct: 246 ----PYPGVKIDEEFXRRLKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEH 300
Query: 689 L 689
L
Sbjct: 301 L 301
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 40/263 (15%)
Query: 443 TVIVVKKLDRVFQDGEK-EFKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGT 500
T + VK ++ E+ EF NE VM G T H ++VRLLG +GQ L+V + + +G
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGD 106
Query: 501 LASFL------FEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
L S+L EN P +A +IA G+ +L+ + + +H ++ +N ++
Sbjct: 107 LKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMV 163
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA----SPEWFRNSTITANVDVYSF 606
+ +I DFG+ + + ++ +K G KG + +PE ++ T + D++SF
Sbjct: 164 AHDFTVKIGDFGMTR--DIYETDYYRK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSF 218
Query: 607 GVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVM 666
GV+L EI S L + + N ++ V C E++
Sbjct: 219 GVVLWEITS---------------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTD 263
Query: 667 VSIWCIQEDPSLRPTMRKVSQML 689
+ C Q +P++RPT ++ +L
Sbjct: 264 LMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG+ F L+ + V+KK V + +E +M+ H ++R+ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ Q ++ ++ G L S L ++ + + A ++ L +LH S II+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYR 130
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
D+KP+NILLD + +I+DFG AK + + + GT Y+A PE ++
Sbjct: 131 DLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIA-PEVVSTKPYNKSI 184
Query: 602 DVYSFGVLLLEIISCRKSF 620
D +SFG+L+ E+++ F
Sbjct: 185 DWWSFGILIYEMLAGYTPF 203
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 28/214 (13%)
Query: 416 VTRSVLLGSSVFVNFTLVGVIQTST--RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTY 472
VTR ++G+ F G+++TS+ + + +K L + + ++ +F E ++GQ
Sbjct: 46 VTRQKVIGAGEFGE-VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FENLKPGWNLRANIAFQIARG 526
H N++RL G + + +++ +++ NG L FL F L+ LR IA G
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG-----IAAG 159
Query: 527 LLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI-----KKAIRG 581
+ +L + +H D+ +NIL++ ++SDFGL+++L + K IR
Sbjct: 160 MKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 216
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
T +PE T+ DV+SFG+++ E+++
Sbjct: 217 T-----APEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 25/187 (13%)
Query: 441 RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
R + +K L + + ++ +F +E ++GQ H N++RL G G+ ++V +++ NG
Sbjct: 76 RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 500 TLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY 553
+L +FL F ++ LR + G+ +L +H D+ +N+L+D
Sbjct: 136 SLDTFLRTHDGQFTIMQLVGMLRG-----VGAGMRYL---SDLGYVHRDLAARNVLVDSN 187
Query: 554 YNAQISDFGLAKLLTLNQSKAI-----KKAIRGTKGYVASPEWFRNSTITANVDVYSFGV 608
++SDFGL+++L + A K IR T +PE T ++ DV+SFGV
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT-----APEAIAFRTFSSASDVWSFGV 242
Query: 609 LLLEIIS 615
++ E+++
Sbjct: 243 VMWEVLA 249
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 25/187 (13%)
Query: 441 RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
R + +K L + + ++ +F +E ++GQ H N++RL G G+ ++V +++ NG
Sbjct: 76 RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 500 TLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY 553
+L +FL F ++ LR + G+ +L +H D+ +N+L+D
Sbjct: 136 SLDTFLRTHDGQFTIMQLVGMLRG-----VGAGMRYL---SDLGYVHRDLAARNVLVDSN 187
Query: 554 YNAQISDFGLAKLLTLNQSKAI-----KKAIRGTKGYVASPEWFRNSTITANVDVYSFGV 608
++SDFGL+++L + A K IR T +PE T ++ DV+SFGV
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT-----APEAIAFRTFSSASDVWSFGV 242
Query: 609 LLLEIIS 615
++ E+++
Sbjct: 243 VMWEVLA 249
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 115/253 (45%), Gaps = 22/253 (8%)
Query: 441 RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
R + +K L + + ++ +F +E ++GQ H N++ L G + +++ +F+ NG
Sbjct: 34 REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENG 93
Query: 500 TLASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
+L SFL +N ++ + IA G+ +L +H + +NIL++ ++
Sbjct: 94 SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKV 150
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIISC 616
SDFGL++ L + S + G K + +PE + T+ DV+S+G+++ E++S
Sbjct: 151 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS- 209
Query: 617 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDP 676
Y W N + + +E D + C L + + C Q+D
Sbjct: 210 -----------YGERPYWDMT---NQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDR 255
Query: 677 SLRPTMRKVSQML 689
+ RP ++ L
Sbjct: 256 NHRPKFGQIVNTL 268
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRL 479
++G F + + R + + + +D ++F E+ V+ +H N++ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 480 LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIA---------RGLLHL 530
LG C+ L ++ +G L FL + L + AF IA + LLH
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 531 HVNCS--------SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGT 582
+ + Q IH ++ +NIL+ + Y A+I+DFGL++ Q +KK +
Sbjct: 145 AADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRL 200
Query: 583 KGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ E S T N DV+S+GVLL EI+S
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNL 515
E++F E ++ + H LV+L G C E LV +F+ +G L+ +L L L
Sbjct: 47 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL 106
Query: 516 RANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + G+ +L C +IH D+ +N L+ + ++SDFG+ + + +Q +
Sbjct: 107 -LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162
Query: 576 KKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
GTK V ASPE F S ++ DV+SFGVL+ E+ S
Sbjct: 163 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V + +
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXME 129
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGAVHRDLAARNILIN 181
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL+++L + A RG K + SPE T+ DV+S+G++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 284
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V + +
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXME 129
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 130 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGYVHRDLAARNILIN 181
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL+++L + A RG K + SPE T+ DV+S+G++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 240 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 284
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 92/175 (52%), Gaps = 6/175 (3%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEG--QNRLLVYKFLNNGTL 501
V+ VKKL ++ ++F+ E+ ++ H N+V+ G C +N L+ ++L G+L
Sbjct: 42 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 101
Query: 502 ASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
+L ++ + +++ QI +G+ +L + + IH ++ +NIL+++ +I D
Sbjct: 102 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGD 158
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
FGL K+L ++ K + + +PE S + DV+SFGV+L E+ +
Sbjct: 159 FGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 13/195 (6%)
Query: 436 IQTSTRTTVIVVKKLDR-VFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLL-- 491
I+ + ++V K+LD + EK+ +EV ++ + H N+VR + N L
Sbjct: 25 IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84
Query: 492 VYKFLNNGTLASFLFENLKP------GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKP 545
V ++ G LAS + + K + LR +A H + ++H D+KP
Sbjct: 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
Query: 546 QNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYS 605
N+ LD N ++ DFGLA++ LN + KA GT Y SPE + D++S
Sbjct: 145 ANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTP-YYMSPEQMNRMSYNEKSDIWS 201
Query: 606 FGVLLLEIISCRKSF 620
G LL E+ + F
Sbjct: 202 LGCLLYELCALMPPF 216
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF--ENLKPGWNL 515
E++F E ++ + H LV+L G C E LV++F+ +G L+ +L L L
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 105
Query: 516 RANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + G+ +L + +IH D+ +N L+ + ++SDFG+ + + +Q +
Sbjct: 106 -LGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 576 KKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
GTK V ASPE F S ++ DV+SFGVL+ E+ S
Sbjct: 162 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 113/261 (43%), Gaps = 36/261 (13%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
++ VK L + K+F E ++ H+++V+ G C EG ++V++++ +G L
Sbjct: 45 LVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNK 104
Query: 504 FLFENLKPGWNLRA--------------NIAFQIARGLLHLHVNCSSQIIHCDIKPQNIL 549
FL + P L A +IA QIA G+++L S +H D+ +N L
Sbjct: 105 FLRAH-GPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCL 160
Query: 550 LDDYYNAQISDFGLAK-LLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGV 608
+ + +I DFG+++ + + + + + + PE T DV+S GV
Sbjct: 161 VGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW--MPPESIMYRKFTTESDVWSLGV 218
Query: 609 LLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVS 668
+L EI + K Y + + +C G++ C +++ +
Sbjct: 219 VLWEIFTYGKQ------PWYQLSNNEVIECITQGRV---------LQRPRTCPQEVYELM 263
Query: 669 IWCIQEDPSLRPTMRKVSQML 689
+ C Q +P +R ++ + +L
Sbjct: 264 LGCWQREPHMRKNIKGIHTLL 284
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 31/234 (13%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFEN---LKPGWN 514
E EF E + + H LV+ G C + +V ++++NG L ++L + L+P
Sbjct: 47 EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL 106
Query: 515 LRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA 574
L + + + G+ L S Q IH D+ +N L+D ++SDFG+ + + +Q
Sbjct: 107 L--EMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-- 159
Query: 575 IKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIISCRK-SFDIEMGEEYAIL 631
+ GTK V ++PE F ++ DV++FG+L+ E+ S K +D+ E +
Sbjct: 160 --VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK 217
Query: 632 TDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
YR D + +M S W E P RPT +++
Sbjct: 218 VSQGHRLYRPHLASDTIYQ--------------IMYSCW--HELPEKRPTFQQL 255
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRLLGFCDE-GQNRLL 491
G+ +T+T TV V + + +E+ ++I +H N+V LLG C + G ++
Sbjct: 50 GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
Query: 492 VYKFLNNGTLASFLF-------------ENLKPGWNLRANI---AFQIARGLLHLHVNCS 535
+ +F G L+++L E+L + ++ +FQ+A+G+ L S
Sbjct: 110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---AS 166
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+ IH D+ +NILL + +I DFGLA+ + + K R ++A PE +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMA-PETIFDR 225
Query: 596 TITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDME 653
T DV+SFGVLL EI S S +++ EE+ C R L EG
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR------LKEGTRM 270
Query: 654 AMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
D E + + C +PS RPT ++ + L
Sbjct: 271 RAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRLLGFCDE-GQNRLL 491
G+ +T+T TV V + + +E+ ++I +H N+V LLG C + G ++
Sbjct: 41 GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
Query: 492 VYKFLNNGTLASFLF-------------ENLKPGWNLRANI---AFQIARGLLHLHVNCS 535
+ +F G L+++L E+L + ++ +FQ+A+G+ L S
Sbjct: 101 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---AS 157
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+ IH D+ +NILL + +I DFGLA+ + + K R ++A PE +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMA-PETIFDR 216
Query: 596 TITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDME 653
T DV+SFGVLL EI S S +++ EE+ C R L EG
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR------LKEGTRM 261
Query: 654 AMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
D E + + C +PS RPT ++ + L
Sbjct: 262 RAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 34/260 (13%)
Query: 439 STRTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLN 497
S + + +K L + + ++ +F E ++GQ H N++RL G + + ++V + +
Sbjct: 41 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXME 100
Query: 498 NGTLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
NG+L SFL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 101 NGSLDSFLRKHDAQFTVIQLVGMLRG-----IASGMKYL---SDMGYVHRDLAARNILIN 152
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVL 609
++SDFGL+++L + A RG K + SPE T+ DV+S+G++
Sbjct: 153 SNLVCKVSDFGLSRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 210
Query: 610 LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSI 669
L E++S + EM + I V+ + C L + +
Sbjct: 211 LWEVMSYGERPYWEMSNQDVI---------------KAVDEGYRLPPPMDCPAALYQLML 255
Query: 670 WCIQEDPSLRPTMRKVSQML 689
C Q+D + RP ++ +L
Sbjct: 256 DCWQKDRNNRPKFEQIVSIL 275
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG+ F L +T + + K + + E +NE+ ++ + H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAK--KALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ G + L+ + ++ G L + E + + FQ+ + +LH I+H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVH 139
Query: 541 CDIKPQNIL---LDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
D+KP+N+L LD+ ISDFGL+K + ++ GT GYVA PE
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVA-PEVLAQKPY 195
Query: 598 TANVDVYSFGVL 609
+ VD +S GV+
Sbjct: 196 SKAVDCWSIGVI 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANI--AFQIARGLLHLHVNCSSQIIHCDIKPQNI 548
LV +N G L ++ + G+ + A +I GL LH +I++ D+KP+NI
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENI 317
Query: 549 LLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGV 608
LLDD+ + +ISD GLA + + + + IK + GT GY+A PE +N T + D ++ G
Sbjct: 318 LLDDHGHIRISDLGLA--VHVPEGQTIKGRV-GTVGYMA-PEVVKNERYTFSPDWWALGC 373
Query: 609 LLLEIISCRKSF 620
LL E+I+ + F
Sbjct: 374 LLYEMIAGQSPF 385
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRLLGFCDE-GQNRLL 491
G+ +T+T TV V + + +E+ ++I +H N+V LLG C + G ++
Sbjct: 41 GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
Query: 492 VYKFLNNGTLASFLF-------------ENLKPGWNLRANI---AFQIARGLLHLHVNCS 535
+ +F G L+++L E+L + ++ +FQ+A+G+ L S
Sbjct: 101 ITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---AS 157
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+ IH D+ +NILL + +I DFGLA+ + + K R ++A PE +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMA-PETIFDR 216
Query: 596 TITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDME 653
T DV+SFGVLL EI S S +++ EE+ C R L EG
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR------LKEGTRM 261
Query: 654 AMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
D E + + C +PS RPT ++ + L
Sbjct: 262 RAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANI--AFQIARGLLHLHVNCSSQIIHCDIKPQNI 548
LV +N G L ++ + G+ + A +I GL LH +I++ D+KP+NI
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENI 317
Query: 549 LLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGV 608
LLDD+ + +ISD GLA + + + + IK + GT GY+A PE +N T + D ++ G
Sbjct: 318 LLDDHGHIRISDLGLA--VHVPEGQTIKGRV-GTVGYMA-PEVVKNERYTFSPDWWALGC 373
Query: 609 LLLEIISCRKSF 620
LL E+I+ + F
Sbjct: 374 LLYEMIAGQSPF 385
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRLLGFCDE-GQNRLL 491
G+ +T+T TV V + + +E+ ++I +H N+V LLG C + G ++
Sbjct: 50 GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
Query: 492 VYKFLNNGTLASFLF-------------ENLKPGWNLRANI---AFQIARGLLHLHVNCS 535
+ +F G L+++L E+L + ++ +FQ+A+G+ L S
Sbjct: 110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---AS 166
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+ IH D+ +NILL + +I DFGLA+ + + K R ++A PE +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMA-PETIFDR 225
Query: 596 TITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDME 653
T DV+SFGVLL EI S S +++ EE+ C R L EG
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR------LKEGTRM 270
Query: 654 AMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
D E + + C +PS RPT ++ + L
Sbjct: 271 RAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 128/291 (43%), Gaps = 43/291 (14%)
Query: 422 LGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLV 477
LG F + G+ +T+T TV V + + +E+ ++I +H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 478 RLLGFCDE-GQNRLLVYKFLNNGTLASFLF-------------ENLKPGWNLRANI---A 520
LLG C + G +++ +F G L+++L E+L + ++ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+A+G+ L S + IH D+ +NILL + +I DFGLA+ + + K R
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 581 GTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 638
++A PE + T DV+SFGVLL EI S S +++ EE+ C
Sbjct: 214 LPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 263
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
R L EG D E + + C +PS RPT ++ + L
Sbjct: 264 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 12/192 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG+ F L +T + + K + E +NE+ ++ + H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAK--EALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ G + L+ + ++ G L + E + + FQ+ + +LH I+H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVH 139
Query: 541 CDIKPQNIL---LDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
D+KP+N+L LD+ ISDFGL+K + ++ GT GYVA PE
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVA-PEVLAQKPY 195
Query: 598 TANVDVYSFGVL 609
+ VD +S GV+
Sbjct: 196 SKAVDCWSIGVI 207
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + A+ GT Y+ PE V
Sbjct: 136 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLP-PEMIEGRMHDEKV 190
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 243
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 244 -----------LKHNPSQRPMLREV 257
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRLLGFCDE-GQNRLL 491
G+ +T+T TV V + + +E+ ++I +H N+V LLG C + G ++
Sbjct: 87 GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 146
Query: 492 VYKFLNNGTLASFLF-------------ENLKPGWNLRANI---AFQIARGLLHLHVNCS 535
+ +F G L+++L E+L + ++ +FQ+A+G+ L S
Sbjct: 147 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---AS 203
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+ IH D+ +NILL + +I DFGLA+ + + K R ++A PE +
Sbjct: 204 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA-PETIFDR 262
Query: 596 TITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDME 653
T DV+SFGVLL EI S S +++ EE+ C R L EG
Sbjct: 263 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR------LKEGTRM 307
Query: 654 AMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
D E + + C +PS RPT ++ + L
Sbjct: 308 RAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSL 99
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 100 LDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 154
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 155 VADFGLARLIEDNEXTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C ++DP
Sbjct: 213 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 258 ERPTFEYLQAFL 269
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRLLGFCDE-GQNRLL 491
G+ +T+T TV V + + +E+ ++I +H N+V LLG C + G ++
Sbjct: 50 GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
Query: 492 VYKFLNNGTLASFLF-------------ENLKPGWNLRANI---AFQIARGLLHLHVNCS 535
+ +F G L+++L E+L + ++ +FQ+A+G+ L S
Sbjct: 110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---AS 166
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+ IH D+ +NILL + +I DFGLA+ + + K R ++A PE +
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA-PETIFDR 225
Query: 596 TITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDME 653
T DV+SFGVLL EI S S +++ EE+ C R L EG
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR------LKEGTRM 270
Query: 654 AMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
D E + + C +PS RPT ++ + L
Sbjct: 271 RAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 443 TVIVVKKLDRVFQ-DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
T++ VK D + +F E ++ Q H N+VRL+G C + Q +V + + G
Sbjct: 140 TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 199
Query: 502 ASFLFENLKPGWNLRANIAFQI----ARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
+FL G LR Q+ A G+ +L C IH D+ +N L+ + +
Sbjct: 200 LTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLK 253
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
ISDFG+++ + A +R +PE ++ DV+SFG+LL E S
Sbjct: 254 ISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRLLGFCDE-GQNRLL 491
G+ +T+T TV V + + +E+ ++I +H N+V LLG C + G ++
Sbjct: 41 GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
Query: 492 VYKFLNNGTLASFLF-------------ENLKPGWNLRANI---AFQIARGLLHLHVNCS 535
+ +F G L+++L E+L + ++ +FQ+A+G+ L S
Sbjct: 101 ITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---AS 157
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+ IH D+ +NILL + +I DFGLA+ + + K R ++A PE +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA-PETIFDR 216
Query: 596 TITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDME 653
T DV+SFGVLL EI S S +++ EE+ C R L EG
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR------LKEGTRM 261
Query: 654 AMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
D E + + C +PS RPT ++ + L
Sbjct: 262 RAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 99
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 100 LDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 154
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C ++DP
Sbjct: 213 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 258 ERPTFEYLQAFL 269
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRLLGFCDE-GQNRLL 491
G+ +T+T TV V + + +E+ ++I +H N+V LLG C + G ++
Sbjct: 41 GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
Query: 492 VYKFLNNGTLASFLF-------------ENLKPGWNLRANI---AFQIARGLLHLHVNCS 535
+ +F G L+++L E+L + ++ +FQ+A+G+ L S
Sbjct: 101 ITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---AS 157
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+ IH D+ +NILL + +I DFGLA+ + + K R ++A PE +
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA-PETIFDR 216
Query: 596 TITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDME 653
T DV+SFGVLL EI S S +++ EE+ C R L EG
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR------LKEGTRM 261
Query: 654 AMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
D E + + C +PS RPT ++ + L
Sbjct: 262 RAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 15/250 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 103
Query: 481 GFCDEGQNRLLV-YKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
FC + +L + NG L ++ + +I L +LH II
Sbjct: 104 -FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGII 159
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA 599
H D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE +
Sbjct: 160 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACK 218
Query: 600 NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DM 652
+ D+++ G ++ ++++ F G EY I ++ F K DLVE +
Sbjct: 219 SSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 276
Query: 653 EAMNDIKCVE 662
+A + C E
Sbjct: 277 DATKRLGCEE 286
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSL 99
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 100 LDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 154
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C ++DP
Sbjct: 213 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 258 ERPTFEYLQAFL 269
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 12/192 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG+ F L +T + + K + E +NE+ ++ + H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAK--EALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ G + L+ + ++ G L + E + + FQ+ + +LH I+H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVH 139
Query: 541 CDIKPQNIL---LDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
D+KP+N+L LD+ ISDFGL+K + ++ GT GYVA PE
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVA-PEVLAQKPY 195
Query: 598 TANVDVYSFGVL 609
+ VD +S GV+
Sbjct: 196 SKAVDCWSIGVI 207
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 12/192 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG+ F L +T + + K + E +NE+ ++ + H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAK--EALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ G + L+ + ++ G L + E + + FQ+ + +LH I+H
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVH 139
Query: 541 CDIKPQNIL---LDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
D+KP+N+L LD+ ISDFGL+K + ++ GT GYVA PE
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVA-PEVLAQKPY 195
Query: 598 TANVDVYSFGVL 609
+ VD +S GV+
Sbjct: 196 SKAVDCWSIGVI 207
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 31 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 88
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 89 LDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 143
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 144 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 201
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C ++DP
Sbjct: 202 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 246
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 247 ERPTFEYLQAFL 258
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 99
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 100 LDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 154
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C ++DP
Sbjct: 213 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 258 ERPTFEYLQAFL 269
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 436 IQTSTRTTVIVVKKLDR-VFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLL-- 491
I+ + ++V K+LD + EK+ +EV ++ + H N+VR + N L
Sbjct: 25 IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84
Query: 492 VYKFLNNGTLASFLFENLKP------GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKP 545
V ++ G LAS + + K + LR +A H + ++H D+KP
Sbjct: 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
Query: 546 QNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYS 605
N+ LD N ++ DFGLA++ LN + K GT Y SPE + D++S
Sbjct: 145 ANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTP-YYMSPEQMNRMSYNEKSDIWS 201
Query: 606 FGVLLLEIISCRKSF 620
G LL E+ + F
Sbjct: 202 LGCLLYELCALMPPF 216
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 33 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 90
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 91 LDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 145
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 146 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 203
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C ++DP
Sbjct: 204 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 248
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 249 ERPTFEYLQAFL 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + A+ GT Y+ PE V
Sbjct: 133 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYL-PPEMIEGRMHDEKV 187
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 240
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 241 -----------LKHNPSQRPMLREV 254
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 155
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A + GT YV SPE + + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV-SPELLTEKSASKS 214
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 273 ATKRLGCEE 281
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 443 TVIVVKKLDRVFQ-DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
T++ VK D + +F E ++ Q H N+VRL+G C + Q +V + + G
Sbjct: 140 TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 199
Query: 502 ASFLFENLKPGWNLRANIAFQI----ARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
+FL G LR Q+ A G+ +L C IH D+ +N L+ + +
Sbjct: 200 LTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLK 253
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
ISDFG+++ + A +R +PE ++ DV+SFG+LL E S
Sbjct: 254 ISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 153
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A A GT YV SPE + +
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV-SPELLTEKSACKS 212
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 271 ATKRLGCEE 279
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 291 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 348
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 349 LDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 403
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 404 VADFGLARLIEDNEYTARQGAKFPIK--WTAPEAALYGRFTIKSDVWSFGILLTELTTKG 461
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C +++P
Sbjct: 462 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 506
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 507 ERPTFEYLQAFL 518
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 42 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 101
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 158
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 159 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 217
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 218 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLD 275
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 276 ATKRLGCEE 284
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSL 99
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 100 LDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 154
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C ++DP
Sbjct: 213 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 258 ERPTFEYLQAFL 269
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 436 IQTSTRTTVIVVKKLDR-VFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLL-- 491
I+ + ++V K+LD + EK+ +EV ++ + H N+VR + N L
Sbjct: 25 IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84
Query: 492 VYKFLNNGTLASFLFENLKP------GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKP 545
V ++ G LAS + + K + LR +A H + ++H D+KP
Sbjct: 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
Query: 546 QNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYS 605
N+ LD N ++ DFGLA++ LN + K GT Y SPE + D++S
Sbjct: 145 ANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTP-YYMSPEQMNRMSYNEKSDIWS 201
Query: 606 FGVLLLEIISCRKSF 620
G LL E+ + F
Sbjct: 202 LGCLLYELCALMPPF 216
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G L
Sbjct: 42 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCL 99
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 100 LDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 154
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C ++DP
Sbjct: 213 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 258 ERPTFEYLQAFL 269
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ G + L + K A ++A L + H S ++IH
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 138 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLP-PEMIEGRMHDEKV 192
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 245
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 246 -----------LKHNPSQRPMLREV 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 133 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 187
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 240
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 241 -----------LKHNPSQRPMLREV 254
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 156
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A + GT YV SPE + +
Sbjct: 157 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV-SPELLTEKSACKS 215
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 216 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 274 ATKRLGCEE 282
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 209 TTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 266
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 267 LDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 321
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGL +L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 322 VADFGLGRLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 379
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C ++DP
Sbjct: 380 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 424
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 425 ERPTFEYLQAFL 436
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G L
Sbjct: 42 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCL 99
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 100 LDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 154
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C ++DP
Sbjct: 213 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 258 ERPTFEYLQAFL 269
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 47/280 (16%)
Query: 430 FTLVGVIQTSTRTTVIVVKKLDRVFQDGE-------KEFKNEVVMIGQTYHKNLVRLLGF 482
F LV + +V+ +K L +GE +EF+ EV ++ H N+V+L G
Sbjct: 32 FGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL 91
Query: 483 CDEGQNRLLVYKFLNNGTLASFLFENLKP-GWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+V +F+ G L L + P W+++ + IA G+ ++ N + I+H
Sbjct: 92 MHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHR 148
Query: 542 DIKPQNILLDDYYN-----AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST 596
D++ NI L A+++DFGL+ ++++ G + + +W T
Sbjct: 149 DLRSPNIFLQSLDENAPVCAKVADFGLS-----------QQSVHSVSGLLGNFQWMAPET 197
Query: 597 I-------TANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVE 649
I T D YSF ++L I++ FD EY+ + R L +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EYSYGKIKFINMIREEGLRPTIP 252
Query: 650 GDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
D C +L V C DP RP + + L
Sbjct: 253 ED--------CPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 133
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG + + + + + GT Y+ PE V
Sbjct: 134 DIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLP-PEMIEGRMHDEKV 188
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 241
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 242 -----------LKHNPSQRPMLREV 255
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 158
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 159 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 213
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 266
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 267 -----------LKHNPSQRPMLREV 280
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V+ + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 138 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 193
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 194 GRVAKIGDFGMA--------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 245
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 246 FGVLLWEIFS 255
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 208 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 265
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 266 LDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 320
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 321 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C +++P
Sbjct: 379 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 423
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 424 ERPTFEYLQAFL 435
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 99
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D+ NIL+ + +
Sbjct: 100 LDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCK 154
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 155 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C ++DP
Sbjct: 213 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPE 257
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 258 ERPTFEYLQAFL 269
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 464 EVVMIGQTYHKNLVRLLGFCDEGQ----NRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
EV + H+N+++ +G G + L+ F G+L+ FL N+ WN +I
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-VSWNELCHI 126
Query: 520 AFQIARGLLHLHVNC-------SSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
A +ARGL +LH + I H DIK +N+LL + A I+DFGLA +S
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
Query: 573 KAIKKAIRGTKGYVASPEWFRNST-----ITANVDVYSFGVLLLEIIS 615
GT+ Y+A PE + +D+Y+ G++L E+ S
Sbjct: 187 AGDTHGQVGTRRYMA-PEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 208 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 265
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 266 LDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 320
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 321 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C +++P
Sbjct: 379 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 423
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 424 ERPTFEYLQAFL 435
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 138 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 192
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 245
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 246 -----------LKHNPSQRPMLREV 259
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 433 VGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
VGV + + T + K D + + EF E ++ + H NLV+LLG C +V
Sbjct: 50 VGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIV 106
Query: 493 YKFLNNGTLASFLFENLKPGWN--LRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
+++ G L +L E + + +A QI+ + +L IH D+ +N L+
Sbjct: 107 TEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 163
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+ + +++DFGL++L+T + A A K +PE +T + DV++FGVLL
Sbjct: 164 GENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKW--TAPESLAYNTFSIKSDVWAFGVLL 221
Query: 611 LEIIS 615
EI +
Sbjct: 222 WEIAT 226
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 138 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP-PEXIEGRXHDEKV 192
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 245
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 246 -----------LKHNPSQRPXLREV 259
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 441 RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
R + +K L + D ++ +F +E ++GQ H N++ L G + + +++ +++ NG
Sbjct: 56 REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENG 115
Query: 500 TLASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
+L +FL +N ++ + I G+ +L +H D+ +NIL++ ++
Sbjct: 116 SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKV 172
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
SDFG++++L + A RG K + +PE T+ DV+S+G+++ E++S
Sbjct: 173 SDFGMSRVLEDDPEAAY--TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 133
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 134 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLP-PEMIEGRMHDEKV 188
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 241
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 242 -----------LKHNPSQRPMLREV 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 133 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLP-PEMIEGRMHDEKV 187
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 240
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 241 -----------LKHNPSQRPMLREV 254
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 136 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 190
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 243
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 244 -----------LKHNPSQRPMLREV 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 149
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 150 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 204
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 257
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 258 -----------LKHNPSQRPMLREV 271
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 9/245 (3%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFC-DEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRAN 518
+K E+ ++ YH+++++ G C D G L LV +++ G+L +L + G
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLL 138
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
A QI G+ +LH + IH D+ +N+LLD+ +I DFGLAK + +
Sbjct: 139 FAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVRE 195
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFD 637
+ + +PE + DV+SFGV L E+++ C S ++ L A
Sbjct: 196 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT--KFLELIGIAQG 253
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQMLXXXXXXXX 697
+L +L+E KC ++ + C + + S RPT + +L
Sbjct: 254 QMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
Query: 698 XXNPS 702
PS
Sbjct: 314 GQAPS 318
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 25/187 (13%)
Query: 441 RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
R + +K L + + ++ +F E ++GQ H N+V L G G+ ++V +F+ NG
Sbjct: 70 RDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENG 129
Query: 500 TLASFL------FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY 553
L +FL F ++ LR IA G+ +L +H D+ +NIL++
Sbjct: 130 ALDAFLRKHDGQFTVIQLVGMLRG-----IAAGMRYL---ADMGYVHRDLAARNILVNSN 181
Query: 554 YNAQISDFGLAKLL-----TLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGV 608
++SDFGL++++ + + K +R T +PE + T+ DV+S+G+
Sbjct: 182 LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT-----APEAIQYRKFTSASDVWSYGI 236
Query: 609 LLLEIIS 615
++ E++S
Sbjct: 237 VMWEVMS 243
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--AN 518
F E ++ + H LV+L E + +V +++N G+L FL + L +
Sbjct: 51 FLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVD 109
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+A Q+A G+ ++ IH D++ NIL+ + +I+DFGLA+L+ N+ A + A
Sbjct: 110 MAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGA 166
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE T DV+SFG+LL E+++ + +
Sbjct: 167 KFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELVTKGRV---------------PYPG 209
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ + VE C L + I C ++DP RPT + L
Sbjct: 210 MNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFL 260
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 116/253 (45%), Gaps = 24/253 (9%)
Query: 441 RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
R + +K L + + ++ +F E ++GQ H N++ L G + + ++V +++ NG
Sbjct: 49 RELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENG 108
Query: 500 TLASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
+L +FL +N ++ + I+ G+ +L +H D+ +NIL++ ++
Sbjct: 109 SLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKV 165
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIISC 616
SDFGL+++L + A RG K + +PE T+ DV+S+G+++ E++S
Sbjct: 166 SDFGLSRVLEDDPEAAY--TTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS- 222
Query: 617 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDP 676
Y W N + VE + + C L + + C Q++
Sbjct: 223 -----------YGERPYWEMT---NQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKER 268
Query: 677 SLRPTMRKVSQML 689
+ RP ++ ML
Sbjct: 269 NSRPKFDEIVNML 281
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V +++N G+L
Sbjct: 39 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSL 96
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR +++ QIA G+ ++ +H D++ NIL+ + +
Sbjct: 97 LDFL--KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 151
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 152 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 209
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C +++P
Sbjct: 210 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 254
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 255 ERPTFEYLQAFL 266
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 473 HKNLVRLLGFC-----DEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA--NIAFQIAR 525
H N+VRL+ C D LV++ ++ L ++L + PG ++ Q R
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 526 GLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGY 585
GL LH NC I+H D+KP+NIL+ +++DFGLA++ + + A + T Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALA---PVVVTLWY 177
Query: 586 VASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
A PE ST VD++S G + E+ + F
Sbjct: 178 RA-PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 411 RNMMNVTRSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQ 470
++M R +G F LV + R VI + R+ +E + EV ++
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDG-RQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 471 TYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF----QIARG 526
H N+V+ +E + +V + G L F N + G + + QI
Sbjct: 80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDL--FKRINAQKGVLFQEDQILDWFVQICLA 137
Query: 527 LLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV 586
L H+H +I+H DIK QNI L Q+ DFG+A++ LN + + +A GT Y+
Sbjct: 138 LKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYL 192
Query: 587 ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
SPE N D+++ G +L E+ + + +F+
Sbjct: 193 -SPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 32 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSL 89
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 90 LDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 144
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 145 VADFGLARLIEDNEXTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 202
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C +++P
Sbjct: 203 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 247
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 248 ERPTFEYLQAFL 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 134
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 135 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLP-PEMIEGRMHDEKV 189
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 242
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 243 -----------LKHNPSQRPMLREV 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 136
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 137 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 191
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 244
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 245 -----------LKHNPSQRPMLREV 258
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 155
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 214
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 273 ATKRLGCEE 281
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 156
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 157 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 215
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 216 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 274 ATKRLGCEE 282
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 208 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSL 265
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 266 LDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 320
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 321 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C +++P
Sbjct: 379 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 423
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 424 ERPTFEYLQAFL 435
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ G + L + K A ++A L + H S ++IH
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 138 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 192
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 245
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 246 -----------LKHNPSQRPMLREV 259
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V +++N G+L
Sbjct: 39 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSL 96
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR +++ QIA G+ ++ +H D++ NIL+ + +
Sbjct: 97 LDFL--KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 151
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 152 VADFGLARLIEDNEWTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 209
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C +++P
Sbjct: 210 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 254
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 255 ERPTFEYLQAFL 266
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 76
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 77 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 133
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 134 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 192
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 193 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 250
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 251 ATKRLGCEE 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 131
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 132 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 186
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 187 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 239
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 240 -----------LKHNPSQRPMLREV 253
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 158
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 159 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLP-PEMIEGRMHDEKV 213
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 266
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 267 -----------LKHNPSQRPMLREV 280
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 441 RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
R + +K L + D ++ +F +E ++GQ H N++ L G + + +++ +++ NG
Sbjct: 35 REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENG 94
Query: 500 TLASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
+L +FL +N ++ + I G+ +L +H D+ +NIL++ ++
Sbjct: 95 SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKV 151
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
SDFG++++L + A RG K + +PE T+ DV+S+G+++ E++S
Sbjct: 152 SDFGMSRVLEDDPEAAY--TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 441 RTTVIVVKKLDRVFQDGEK-EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
R + +K L + D ++ +F +E ++GQ H N++ L G + + +++ +++ NG
Sbjct: 41 REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENG 100
Query: 500 TLASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
+L +FL +N ++ + I G+ +L +H D+ +NIL++ ++
Sbjct: 101 SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKV 157
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIIS 615
SDFG++++L + A RG K + +PE T+ DV+S+G+++ E++S
Sbjct: 158 SDFGMSRVLEDDPEAAY--TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 155
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 214
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 273 ATKRLGCEE 281
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 133 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLP-PEMIEGRMHDEKV 187
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 240
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 241 -----------LKHNPSQRPMLREV 254
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 153
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 212
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 271 ATKRLGCEE 279
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 445 IVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASF 504
+ VKK+D Q + NEVV++ +H N+V + G +V +FL G L
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 505 LFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLA 564
+ + A + + R L +LH + +IH DIK +ILL ++SDFG
Sbjct: 133 VTHTRMNEEQI-ATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFC 188
Query: 565 KLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
++ K +K + GT ++A PE VD++S G++++E+I
Sbjct: 189 AQVSKEVPK--RKXLVGTPYWMA-PEVISRLPYGTEVDIWSLGIMVIEMI 235
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 133
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 134 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLP-PEMIEGRMHDEKV 188
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 241
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 242 -----------LKHNPSQRPMLREV 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 138 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLP-PEMIEGRMHDEKV 192
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 245
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 246 -----------LKHNPSQRPMLREV 259
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 75
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 76 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 132
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 133 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 191
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 192 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 249
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 250 ATKRLGCEE 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 133 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLP-PEMIEGRMHDEKV 187
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 240
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 241 -----------LKHNPSQRPMLREV 254
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 153
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 212
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 271 ATKRLGCEE 279
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 155
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 214
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 273 ATKRLGCEE 281
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 28/252 (11%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
TT + +K L E F E ++ + H+ LV+L E + +V ++++ G+L
Sbjct: 35 TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 92
Query: 502 ASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
FL + G LR ++A QIA G+ ++ +H D++ NIL+ + +
Sbjct: 93 LDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 147
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
++DFGLA+L+ N+ A + A K +PE T DV+SFG+LL E+ +
Sbjct: 148 VADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGRFTIKSDVWSFGILLTELTTKG 205
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
+ + N ++ D VE +C E L + C +++P
Sbjct: 206 RV---------------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 250
Query: 678 LRPTMRKVSQML 689
RPT + L
Sbjct: 251 ERPTFEYLQAFL 262
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 138 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 193
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 194 GRVAKIGDFGMA--------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 245
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 246 FGVLLWEIFS 255
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 152
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A + GT YV SPE + +
Sbjct: 153 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV-SPELLTEKSACKS 211
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 212 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 270 ATKRLGCEE 278
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 9/232 (3%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFC-DEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRAN 518
+K E+ ++ YH+++++ G C D+G+ L LV +++ G+L +L + G
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLL 121
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
A QI G+ +LH S IH ++ +N+LLD+ +I DFGLAK + +
Sbjct: 122 FAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 178
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFD 637
+ + +PE + DV+SFGV L E+++ C S ++ L A
Sbjct: 179 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT--KFLELIGIAQG 236
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+L +L+E KC ++ + C + + S RPT + +L
Sbjct: 237 QMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
E + + EV + H N++RL G+ + L+ ++ GT+ L + K A
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
++A L + H S ++IH DIKP+N+LL +I+DFG +++ + +
Sbjct: 112 TYITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRA 164
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
A+ GT Y+ PE VD++S GVL E + + F+ + D
Sbjct: 165 ALCGTLDYLP-PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ----------D 213
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
Y+ + D + +L ++ +PS RP +R+V
Sbjct: 214 TYKRISRVEFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREV 254
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 37/263 (14%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
++ VK L K+F+ E ++ H+++V+ G C +G ++V++++ +G L
Sbjct: 47 LVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNK 106
Query: 504 FL---------FENLKP-------GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQN 547
FL + +P G + +IA QIA G+++L S +H D+ +N
Sbjct: 107 FLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRN 163
Query: 548 ILLDDYYNAQISDFGLAK-LLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSF 606
L+ +I DFG+++ + + + + + + PE T DV+SF
Sbjct: 164 CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW--MPPESIMYRKFTTESDVWSF 221
Query: 607 GVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVM 666
GV+L EI + K ++ I +C G++ + C +++
Sbjct: 222 GVILWEIFTYGKQPWFQLSNTEVI------ECITQGRVLE---------RPRVCPKEVYD 266
Query: 667 VSIWCIQEDPSLRPTMRKVSQML 689
V + C Q +P R ++++ ++L
Sbjct: 267 VMLGCWQREPQQRLNIKEIYKIL 289
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 73
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 74 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 130
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 131 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 189
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 190 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 247
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 248 ATKRLGCEE 256
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 74
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 75 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 131
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 132 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 190
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 191 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 248
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 249 ATKRLGCEE 257
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 136 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 190
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 243
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 244 -----------LKHNPSQRPMLREV 257
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 133 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYL-PPEMIEGRMHDEKV 187
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 240
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 241 -----------LKHNPSQRPMLREV 254
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 133 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLP-PEMIEGRMHDEKV 187
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 240
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 241 -----------LKHNPSQRPMLREV 254
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 153
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 154 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 212
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 271 ATKRLGCEE 279
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 124 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 179
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 180 GRVAKIGDFGMA--------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 231
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 232 FGVLLWEIFS 241
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 136 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLP-PEMIEGRMHDEKV 190
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 243
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 244 -----------LKHNPSQRPMLREV 257
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 136 DIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLP-PEMIEGRMHDEKV 190
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 243
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 244 -----------LKHNPSQRPMLREV 257
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 80 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 139
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 140 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 195
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 196 GRVAKIGDFGMA--------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 247
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 248 FGVLLWEIFS 257
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 137
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 138 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 193
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 194 GRVAKIGDFGMA--------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 245
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 246 FGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 124 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 179
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 180 GRVAKIGDFGMA--------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 231
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 232 FGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 55 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 114
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 115 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 170
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 171 GRVAKIGDFGMA--------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 222
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 223 FGVLLWEIFS 232
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 44/302 (14%)
Query: 411 RNMMNVTRSVLLGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVV 466
RN ++ ++ LG+ F V T G+I++ TV VK L E+E +E+
Sbjct: 45 RNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTV-AVKMLKPSAHLTEREALMSELK 101
Query: 467 MIGQT-YHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA--------SFLFENLKPG----- 512
++ H N+V LLG C G L++ ++ G L SF+ P
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 513 -----WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLL 567
+ ++Q+A+G+ L S IH D+ +NILL +I DFGLA+ +
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHI 218
Query: 568 TLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+ + +K R ++A PE N T DV+S+G+ L E+ S S M +
Sbjct: 219 KNDSNYVVKGNARLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 277
Query: 628 YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
K +++ ++ ++ + C DP RPT +++ Q
Sbjct: 278 --------------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
Query: 688 ML 689
++
Sbjct: 324 LI 325
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 80
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 137
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 138 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 196
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 197 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 254
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 255 ATKRLGCEE 263
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTT---VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVR 478
LGS F GV+ V V K ++ + + KNE+ ++ Q +H L+
Sbjct: 59 LGSGAF------GVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 479 LLGFCDEGQNRLLVYKFLNNGTLASFL-FENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
L ++ +L+ +FL+ G L + E+ K N Q GL H+H +
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS--- 169
Query: 538 IIHCDIKPQNILLD--DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
I+H DIKP+NI+ + + +I DFGLA L ++ I K T + A+PE
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEF-AAPEIVDRE 225
Query: 596 TITANVDVYSFGVLLLEIISCRKSF----DIEMGEEYAILTDWAFD 637
+ D+++ GVL ++S F D+E + DW FD
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK-RCDWEFD 270
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 70 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 129
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 130 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 185
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 186 GRVAKIGDFGMA--------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 237
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 238 FGVLLWEIFS 247
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 473 HKNLVRLLGFC-----DEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA--NIAFQIAR 525
H N+VRL C D LV++ ++ L ++L + +PG ++ FQ+ R
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 526 GLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGY 585
GL LH S +++H D+KPQNIL+ +++DFGLA++ + + ++ T Y
Sbjct: 132 GLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWY 185
Query: 586 VASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
A PE S+ VD++S G + E+ + F
Sbjct: 186 RA-PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 122
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 123 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 178
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 179 GRVAKIGDFGMA--------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 230
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 231 FGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 122
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 123 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 178
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 179 GRVAKIGDFGMA--------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 230
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 231 FGVLLWEIFS 240
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 473 HKNLVRLLGFC-----DEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA--NIAFQIAR 525
H N+VRL C D LV++ ++ L ++L + +PG ++ FQ+ R
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 526 GLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGY 585
GL LH S +++H D+KPQNIL+ +++DFGLA++ + + ++ T Y
Sbjct: 132 GLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWY 185
Query: 586 VASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
A PE S+ VD++S G + E+ + F
Sbjct: 186 RA-PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 27/229 (11%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
E + + EV + H N++RL G+ + L+ ++ GT+ L + K A
Sbjct: 49 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 108
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
++A L + H S ++IH DIKP+N+LL +I+DFG +++ + +
Sbjct: 109 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRT 161
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAF 636
+ GT Y+ PE VD++S GVL E + + F+ +E Y ++ F
Sbjct: 162 TLCGTLDYLP-PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF 220
Query: 637 DCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
D + EG + ++ + ++ +PS RP +R+V
Sbjct: 221 TF-----PDFVTEGARDLISRL-------------LKHNPSQRPMLREV 251
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 473 HKNLVRLLGFC-----DEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA--NIAFQIAR 525
H N+VRL C D LV++ ++ L ++L + +PG ++ FQ+ R
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 526 GLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGY 585
GL LH S +++H D+KPQNIL+ +++DFGLA++ + + ++ T Y
Sbjct: 132 GLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---SVVVTLWY 185
Query: 586 VASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
A PE S+ VD++S G + E+ + F
Sbjct: 186 RA-PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 112/280 (40%), Gaps = 47/280 (16%)
Query: 430 FTLVGVIQTSTRTTVIVVKKLDRVFQDGE-------KEFKNEVVMIGQTYHKNLVRLLGF 482
F LV + +V+ +K L +GE +EF+ EV ++ H N+V+L G
Sbjct: 32 FGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL 91
Query: 483 CDEGQNRLLVYKFLNNGTLASFLFENLKP-GWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+V +F+ G L L + P W+++ + IA G+ ++ N + I+H
Sbjct: 92 MHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHR 148
Query: 542 DIKPQNILLDDYYN-----AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST 596
D++ NI L A+++DFG + ++++ G + + +W T
Sbjct: 149 DLRSPNIFLQSLDENAPVCAKVADFGTS-----------QQSVHSVSGLLGNFQWMAPET 197
Query: 597 I-------TANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVE 649
I T D YSF ++L I++ FD EY+ + R L +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EYSYGKIKFINMIREEGLRPTIP 252
Query: 650 GDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
D C +L V C DP RP + + L
Sbjct: 253 ED--------CPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 81 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 140
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 141 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 196
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 197 GRVAKIGDFGMA--------RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 248
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 249 FGVLLWEIFS 258
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 152
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 153 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 211
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVEG--DME 653
D+++ G ++ ++++ F G EY I ++ F K DLVE ++
Sbjct: 212 SDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 654 AMNDIKCVE 662
A + C E
Sbjct: 270 ATKRLGCEE 278
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ VKKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + L + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLCQVIHMEL--DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ N R Y +PE ANVD++S G ++ E++
Sbjct: 166 KILDFGLARTACTNFMMTPYVVTR----YYRAPEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRL-LVYKFLNNGTLASFLFENLKP--GWNL 515
+ F E ++ Q H NLV+LLG E + L +V +++ G+L +L + G +
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 516 RANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + + +L N +H D+ +N+L+ + A++SDFGL K + Q
Sbjct: 110 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG- 165
Query: 576 KKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K ++ T +PE R + + DV+SFG+LL EI S
Sbjct: 166 KLPVKWT-----APEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
+E NE+ ++ H N+++L ++ + LV +F G L + K AN
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD---YYNAQISDFGLAKLLTLNQSKAI 575
I QI G+ +LH I+H DIKP+NILL++ N +I DFGL+ SK
Sbjct: 151 IMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF----SKDY 203
Query: 576 KKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF----------DIEMG 625
K R Y +PE + DV+S GV++ ++ F +E G
Sbjct: 204 KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG 262
Query: 626 EEYAILTDW 634
+ Y DW
Sbjct: 263 KYYFDFNDW 271
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 473 HKNLVRLLGFC-----DEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA--NIAFQIAR 525
H N+VRL+ C D LV++ ++ L ++L + PG ++ Q R
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 526 GLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGY 585
GL LH NC I+H D+KP+NIL+ +++DFGLA++ + A+ + +
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALDPVV--VTLW 176
Query: 586 VASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
+PE ST VD++S G + E+ + F
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 44/302 (14%)
Query: 411 RNMMNVTRSVLLGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVV 466
RN ++ ++ LG+ F V T G+I++ TV VK L E+E +E+
Sbjct: 22 RNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTV-AVKMLKPSAHLTEREALMSELK 78
Query: 467 MIGQT-YHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA--------SFLFENLKPG----- 512
++ H N+V LLG C G L++ ++ G L SF+ P
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 513 -----WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLL 567
+ ++Q+A+G+ L S IH D+ +NILL +I DFGLA+ +
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI 195
Query: 568 TLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+ + +K R ++A PE N T DV+S+G+ L E+ S S M +
Sbjct: 196 KNDSNYVVKGNARLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254
Query: 628 YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
K +++ ++ ++ + C DP RPT +++ Q
Sbjct: 255 --------------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
Query: 688 ML 689
++
Sbjct: 301 LI 302
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 473 HKNLVRLLGFC-----DEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA--NIAFQIAR 525
H N+VRL+ C D LV++ ++ L ++L + PG ++ Q R
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLMRQFLR 131
Query: 526 GLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGY 585
GL LH NC I+H D+KP+NIL+ +++DFGLA++ + A+ + +
Sbjct: 132 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALTPVV--VTLW 184
Query: 586 VASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
+PE ST VD++S G + E+ + F
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 124 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 179
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 180 GRVAKIGDFGMA--------QDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 231
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 232 FGVLLWEIFS 241
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 163
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 164 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 219
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 220 GRVAKIGDFGMA--------RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 271
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 272 FGVLLWEIFS 281
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 9/232 (3%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFC-DEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRAN 518
+K E+ ++ YH+++++ G C D+G+ L LV +++ G+L +L + G
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLL 121
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
A QI G+ +LH + IH ++ +N+LLD+ +I DFGLAK + +
Sbjct: 122 FAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 178
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFD 637
+ + +PE + DV+SFGV L E+++ C S ++ L A
Sbjct: 179 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT--KFLELIGIAQG 236
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+L +L+E KC ++ + C + + S RPT + +L
Sbjct: 237 QMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 433 VGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
+G ST+ V +K Q F E ++ H LVRL + ++
Sbjct: 31 MGYYNNSTKVAVKTLKPGTMSVQ----AFLEEANLMKTLQHDKLVRLYAVVTREEPIYII 86
Query: 493 YKFLNNGTLASFLFENLKPGWNLRANIAF--QIARGLLHLHVNCSSQIIHCDIKPQNILL 550
+++ G+L FL + L I F QIA G+ ++ IH D++ N+L+
Sbjct: 87 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLV 143
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+ +I+DFGLA+++ N+ A + A K +PE T DV+SFG+LL
Sbjct: 144 SESLMCKIADFGLARVIEDNEYTAREGAKFPIKW--TAPEAINFGCFTIKSDVWSFGILL 201
Query: 611 LEIISCRK 618
EI++ K
Sbjct: 202 YEIVTYGK 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 134
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I++FG +++ + + + GT Y+ PE V
Sbjct: 135 DIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 189
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 242
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 243 -----------LKHNPSQRPMLREV 256
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 445 IVVKKLDRVF-QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLAS 503
+ VK L V + E +F E ++I + H+N+VR +G + R ++ + + G L S
Sbjct: 90 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 149
Query: 504 FLFENLKPGWNLRANIAF--------QIARGLLHLHVNCSSQIIHCDIKPQNILLD---D 552
FL E +P + +++A IA G +L N IH DI +N LL
Sbjct: 150 FLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 205
Query: 553 YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVA-------SPEWFRNSTITANVDVYS 605
A+I DFG+A + I +A KG A PE F T+ D +S
Sbjct: 206 GRVAKIGDFGMA--------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 257
Query: 606 FGVLLLEIIS 615
FGVLL EI S
Sbjct: 258 FGVLLWEIFS 267
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 44/302 (14%)
Query: 411 RNMMNVTRSVLLGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVV 466
RN ++ ++ LG+ F V T G+I++ TV VK L E+E +E+
Sbjct: 45 RNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTV-AVKMLKPSAHLTEREALMSELK 101
Query: 467 MIGQT-YHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA--------SFLFENLKPG----- 512
++ H N+V LLG C G L++ ++ G L SF+ P
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 513 -----WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLL 567
+ ++Q+A+G+ L S IH D+ +NILL +I DFGLA+ +
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI 218
Query: 568 TLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+ + +K R ++A PE N T DV+S+G+ L E+ S S M +
Sbjct: 219 KNDSNYVVKGNARLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 277
Query: 628 YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
K +++ ++ ++ + C DP RPT +++ Q
Sbjct: 278 --------------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
Query: 688 ML 689
++
Sbjct: 324 LI 325
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRL-LVYKFLNNGTLASFLFENLKP--GWNL 515
+ F E ++ Q H NLV+LLG E + L +V +++ G+L +L + G +
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290
Query: 516 RANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + + +L N +H D+ +N+L+ + A++SDFGL K + Q
Sbjct: 291 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG- 346
Query: 576 KKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K ++ T +PE R + DV+SFG+LL EI S
Sbjct: 347 KLPVKWT-----APEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 112/280 (40%), Gaps = 47/280 (16%)
Query: 430 FTLVGVIQTSTRTTVIVVKKLDRVFQDGE-------KEFKNEVVMIGQTYHKNLVRLLGF 482
F LV + +V+ +K L +GE +EF+ EV ++ H N+V+L G
Sbjct: 32 FGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL 91
Query: 483 CDEGQNRLLVYKFLNNGTLASFLFENLKP-GWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+V +F+ G L L + P W+++ + IA G+ ++ N + I+H
Sbjct: 92 MHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHR 148
Query: 542 DIKPQNILLDDYYN-----AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST 596
D++ NI L A+++DF L+ ++++ G + + +W T
Sbjct: 149 DLRSPNIFLQSLDENAPVCAKVADFSLS-----------QQSVHSVSGLLGNFQWMAPET 197
Query: 597 I-------TANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVE 649
I T D YSF ++L I++ FD EY+ + R L +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EYSYGKIKFINMIREEGLRPTIP 252
Query: 650 GDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
D C +L V C DP RP + + L
Sbjct: 253 ED--------CPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV + + + +K L + + + +E E ++ Q + +VRL+G C + + +LV
Sbjct: 29 GVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87
Query: 493 YKFLNNGTLASFLFENLK--PGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
+ G L FL + P N+ A + Q++ G+ +L +H D+ +N+LL
Sbjct: 88 MEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLE---EKNFVHRDLAARNVLL 143
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+ + A+ISDFGL+K L + S ++ +PE ++ DV+S+GV +
Sbjct: 144 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 203
Query: 611 LEIIS 615
E +S
Sbjct: 204 WEALS 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 433 VGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
+G ST+ V +K Q F E ++ H LVRL + + ++
Sbjct: 30 MGYYNNSTKVAVKTLKPGTMSVQ----AFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII 85
Query: 493 YKFLNNGTLASFLFENLKPGWNLRANIAF--QIARGLLHLHVNCSSQIIHCDIKPQNILL 550
+F+ G+L FL + L I F QIA G+ ++ IH D++ N+L+
Sbjct: 86 TEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLV 142
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+ +I+DFGLA+++ N+ A + A K +PE T +V+SFG+LL
Sbjct: 143 SESLMCKIADFGLARVIEDNEYTAREGAKFPIKW--TAPEAINFGCFTIKSNVWSFGILL 200
Query: 611 LEIISCRK 618
EI++ K
Sbjct: 201 YEIVTYGK 208
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 44/302 (14%)
Query: 411 RNMMNVTRSVLLGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVV 466
RN ++ ++ LG+ F V T G+I++ TV VK L E+E +E+
Sbjct: 40 RNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTV-AVKMLKPSAHLTEREALMSELK 96
Query: 467 MIGQT-YHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA--------SFLFENLKPG----- 512
++ H N+V LLG C G L++ ++ G L SF+ P
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 156
Query: 513 -----WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLL 567
+ ++Q+A+G+ L S IH D+ +NILL +I DFGLA+ +
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI 213
Query: 568 TLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+ + +K R ++A PE N T DV+S+G+ L E+ S S M +
Sbjct: 214 KNDSNYVVKGNARLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 272
Query: 628 YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
K +++ ++ ++ + C DP RPT +++ Q
Sbjct: 273 --------------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
Query: 688 ML 689
++
Sbjct: 319 LI 320
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + K A ++A L + H S ++IH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I++FG +++ + + + GT Y+ PE V
Sbjct: 136 DIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 190
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S GVL E + + F+ +E Y ++ F D + EG + ++ +
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL-- 243
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKV 685
++ +PS RP +R+V
Sbjct: 244 -----------LKHNPSQRPMLREV 257
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRL-LVYKFLNNGTLASFLFENLKP--GWNL 515
+ F E ++ Q H NLV+LLG E + L +V +++ G+L +L + G +
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 118
Query: 516 RANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + + +L N +H D+ +N+L+ + A++SDFGL K + Q
Sbjct: 119 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG- 174
Query: 576 KKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K ++ T +PE R + DV+SFG+LL EI S
Sbjct: 175 KLPVKWT-----APEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
E E ++ Q + +VR++G C E ++ +LV + G L +L +N +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS--KAIKK 577
Q++ G+ +L S +H D+ +N+LL + A+ISDFGL+K L +++ KA
Sbjct: 133 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K Y +PE ++ DV+SFGVL+ E S
Sbjct: 190 GKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
E E ++ Q + +VR++G C E ++ +LV + G L +L +N +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS--KAIKK 577
Q++ G+ +L S +H D+ +N+LL + A+ISDFGL+K L +++ KA
Sbjct: 133 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K Y +PE ++ DV+SFGVL+ E S
Sbjct: 190 GKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 427 FVNFTLVG------VIQTSTRTT--VIVVKKLDRVFQDGEKEFKN----EVVMIGQTYHK 474
+ N LVG V++ + T ++ +KK + D +K K E+ ++ Q H+
Sbjct: 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF--LESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASF-LFENLKPGWNLRANIAFQIARGLLHLHVN 533
NLV LL C + + LV++F+++ L LF N + + FQI G+ H
Sbjct: 85 NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH-- 141
Query: 534 CSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFR 593
S IIH DIKP+NIL+ ++ DFG A+ TL + T+ Y A
Sbjct: 142 -SHNIIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAPELLVG 198
Query: 594 NSTITANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
+ VDV++ G L+ E+ F D ++ + Y I+
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L +F+ + G L +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKTFMDASALTGIPLPLIKSYL 112
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 113 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 161
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 162 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 213
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 214 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF-ENLKPGWNLRA 517
+ F+NEV ++ +T H N++ +G+ + N +V ++ +L L + K
Sbjct: 77 QAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLI 135
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
+IA Q A+G+ +LH + IIH D+K NI L + +I DFGLA T+ + +
Sbjct: 136 DIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLA---TVKSRWSGSQ 189
Query: 578 AIRGTKGYV--ASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ G V +PE R N+ + DVYS+G++L E+++
Sbjct: 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
E E ++ Q + +VR++G C E ++ +LV + G L +L +N +
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 130
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS--KAIKK 577
Q++ G+ +L S +H D+ +N+LL + A+ISDFGL+K L +++ KA
Sbjct: 131 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 187
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K Y +PE ++ DV+SFGVL+ E S
Sbjct: 188 GKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 44/302 (14%)
Query: 411 RNMMNVTRSVLLGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVV 466
RN ++ ++ LG+ F V T G+I++ TV VK L E+E +E+
Sbjct: 38 RNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTV-AVKMLKPSAHLTEREALMSELK 94
Query: 467 MIGQT-YHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA--------SFLFENLKPG----- 512
++ H N+V LLG C G L++ ++ G L SF+ P
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 513 -----WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLL 567
+ ++Q+A+G+ L S IH D+ +NILL +I DFGLA+ +
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI 211
Query: 568 TLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+ + +K R ++A PE N T DV+S+G+ L E+ S S M +
Sbjct: 212 KNDSNYVVKGNARLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 270
Query: 628 YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQ 687
K +++ ++ ++ + C DP RPT +++ Q
Sbjct: 271 --------------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
Query: 688 ML 689
++
Sbjct: 317 LI 318
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 473 HKNLVRLLGFC-----DEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA--NIAFQIAR 525
H N+VRL+ C D LV++ ++ L ++L + PG ++ Q R
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 526 GLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGY 585
GL LH NC I+H D+KP+NIL+ +++DFGLA++ + A+ + +
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALFPVV--VTLW 176
Query: 586 VASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
+PE ST VD++S G + E+ + F
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
E E ++ Q + +VR++G C E ++ +LV + G L +L +N +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS--KAIKK 577
Q++ G+ +L S +H D+ +N+LL + A+ISDFGL+K L +++ KA
Sbjct: 117 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTH 173
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K Y +PE ++ DV+SFGVL+ E S
Sbjct: 174 GKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
E E ++ Q + +VR++G C E ++ +LV + G L +L +N +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS--KAIKK 577
Q++ G+ +L S +H D+ +N+LL + A+ISDFGL+K L +++ KA
Sbjct: 117 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 173
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K Y +PE ++ DV+SFGVL+ E S
Sbjct: 174 GKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRL-LVYKFLNNGTLASFLFENLKP--GWNL 515
+ F E ++ Q H NLV+LLG E + L +V +++ G+L +L + G +
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 516 RANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + + +L N +H D+ +N+L+ + A++SDFGL K + Q
Sbjct: 104 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG- 159
Query: 576 KKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K ++ T +PE R + DV+SFG+LL EI S
Sbjct: 160 KLPVKWT-----APEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
E E ++ Q + +VR++G C E ++ +LV + G L +L +N +
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 110
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS--KAIKK 577
Q++ G+ +L S +H D+ +N+LL + A+ISDFGL+K L +++ KA
Sbjct: 111 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 167
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K Y +PE ++ DV+SFGVL+ E S
Sbjct: 168 GKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 416 VTRSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKN 475
V+++ +LG F T + ++K R +D E E KNE+ ++ Q H N
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKT--RGMKDKE-EVKNEISVMNQLDHAN 147
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA--NIAF--QIARGLLHLH 531
L++L + + +LV ++++ G L + + +NL I F QI G+ H+H
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE---SYNLTELDTILFMKQICEGIRHMH 204
Query: 532 VNCSSQIIHCDIKPQNILL--DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
I+H D+KP+NIL D +I DFGLA+ + + K GT ++A P
Sbjct: 205 ---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNFGTPEFLA-P 257
Query: 590 EWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
E ++ D++S GV+ ++S F
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
E E ++ Q + +VR++G C E ++ +LV + G L +L +N +
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 112
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS--KAIKK 577
Q++ G+ +L S +H D+ +N+LL + A+ISDFGL+K L +++ KA
Sbjct: 113 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K Y +PE ++ DV+SFGVL+ E S
Sbjct: 170 GKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 116
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 117 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 165
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 166 TYTHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 217
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 218 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFEN-LKPGWNLRA 517
+ FKNEV ++ +T H N++ +G+ + Q +V ++ +L L + K
Sbjct: 53 QAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLI 111
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
+IA Q ARG+ +LH IIH D+K NI L + +I DFGLA + + +
Sbjct: 112 DIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 578 AIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ G+ ++A PE R ++ + DVY+FG++L E+++
Sbjct: 169 QLSGSILWMA-PEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 116
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 117 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 165
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 166 TYTHEVVT-LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 217
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 218 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 245
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
E E ++ Q + +VR++G C E ++ +LV + G L +L +N +
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 122
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS--KAIKK 577
Q++ G+ +L S +H D+ +N+LL + A+ISDFGL+K L +++ KA
Sbjct: 123 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K Y +PE ++ DV+SFGVL+ E S
Sbjct: 180 GKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 155
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSAXKS 214
Query: 601 VDVYSFGVLLLEIISCRKSF 620
D+++ G ++ ++++ F
Sbjct: 215 SDLWALGCIIYQLVAGLPPF 234
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 21/238 (8%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFC-DEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ E+ ++ YH+++V+ G C D+G+ + LV +++ G+L +L + G
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV-GLAQLLL 116
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
A QI G+ +LH + IH + +N+LLD+ +I DFGLAK + +
Sbjct: 117 FAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 173
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII-------SCRKSFDIEMGEEYAIL 631
+ + +PE + DV+SFGV L E++ S F +G +
Sbjct: 174 DGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQM 233
Query: 632 TDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
T +L +L+E +C ++ + C + + S RPT + + +L
Sbjct: 234 TVL--------RLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 283
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LG F L + TS + +++K + ++ E ++ + H V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + + NG L ++ + +I L +LH IIH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 155
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+KP+NILL++ + QI+DFG AK+L+ +A GT YV SPE + +
Sbjct: 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-SPELLTEKSACKS 214
Query: 601 VDVYSFGVLLLEIISCRKSF 620
D+++ G ++ ++++ F
Sbjct: 215 SDLWALGCIIYQLVAGLPPF 234
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 112
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 113 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 161
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 162 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 213
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 214 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 111
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 112 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 160
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 161 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 212
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 213 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 110 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 158
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 159 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 210
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 211 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA 520
F E ++ H LV+L + + ++ +F+ G+L FL + L I
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 521 F--QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
F QIA G+ + IH D++ NIL+ +I+DFGLA+++ N+ A + A
Sbjct: 289 FSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 345
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE + T DV+SFG+LL+EI++ + +
Sbjct: 346 KFPIKW--TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI---------------PYPG 388
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E C E+L + + C + P RPT + +L
Sbjct: 389 MSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 108
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 109 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 157
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 158 TYTHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 209
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 210 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 21/238 (8%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFC-DEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ E+ ++ YH+++V+ G C D+G+ + LV +++ G+L +L + G
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV-GLAQLLL 115
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
A QI G+ +LH + IH + +N+LLD+ +I DFGLAK + +
Sbjct: 116 FAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII-------SCRKSFDIEMGEEYAIL 631
+ + +PE + DV+SFGV L E++ S F +G +
Sbjct: 173 DGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQM 232
Query: 632 TDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
T +L +L+E +C ++ + C + + S RPT + + +L
Sbjct: 233 TVL--------RLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 282
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 111
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 112 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 160
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 161 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 212
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 213 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
E E ++ Q + +VR++G C E ++ +LV + G L +L +N +
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 475
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS--KAIKK 577
Q++ G+ +L S +H D+ +N+LL + A+ISDFGL+K L +++ KA
Sbjct: 476 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 532
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K Y +PE ++ DV+SFGVL+ E S
Sbjct: 533 GKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 110 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 158
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 159 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 210
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 211 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 110 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 158
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 159 TYTHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 210
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 211 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
E E ++ Q + +VR++G C E ++ +LV + G L +L +N +
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 474
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS--KAIKK 577
Q++ G+ +L S +H D+ +N+LL + A+ISDFGL+K L +++ KA
Sbjct: 475 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K Y +PE ++ DV+SFGVL+ E S
Sbjct: 532 GKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 110
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 111 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 159
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 160 TYTHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 211
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 212 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 110 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 158
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 159 TYTHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 210
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 211 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 110 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 158
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 159 TYTHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 210
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 211 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 108
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 109 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 157
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 158 TYTHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 209
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 210 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 108
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 109 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 157
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 158 TYTHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 209
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 210 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 112
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 113 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 161
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 162 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 213
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 214 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 110 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 158
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 159 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 210
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 211 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 110
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 111 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 159
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 160 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 211
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 212 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ E + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 DANLXQVIQMEL---DHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 617 RKSF 620
+ F
Sbjct: 222 KILF 225
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 110 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 158
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 159 TYTHEVVT-LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 210
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 211 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
+LGS F LV T + +KK F+D E NE+ ++ + H+N+V L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKK-SPAFRDSSLE--NEIAVLKKIKHENIVTLE 72
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIH 540
+ + LV + ++ G L + E + + Q+ + +LH N I+H
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVH 129
Query: 541 CDIKPQNILL---DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
D+KP+N+L ++ I+DFGL+K+ + I GT GYVA PE
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVA-PEVLAQKPY 184
Query: 598 TANVDVYSFGVL 609
+ VD +S GV+
Sbjct: 185 SKAVDCWSIGVI 196
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 108
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 109 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 157
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 158 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 209
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 210 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 113
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 114 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 162
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 163 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 214
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 215 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 113
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 114 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 162
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 163 TYTHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 214
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 215 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
E EF E ++ H+ LV+L G C + + ++ +++ NG L ++L E ++ + +
Sbjct: 48 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQ 106
Query: 518 NIAF--QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + + +L S Q +H D+ +N L++D ++SDFGL++ + ++
Sbjct: 107 LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--- 160
Query: 576 KKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 633
+ RG+K V + PE S ++ D+++FGVL+ EI S K
Sbjct: 161 -TSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM-------------- 205
Query: 634 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMR 683
++ + N + + + + EK+ + C E RPT +
Sbjct: 206 -PYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 254
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 110
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 111 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 159
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 160 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 211
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 212 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ VKKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + L + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 110 D-ANLCQVIHMEL--DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 163
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ + N R Y +PE NVD++S G ++ E++
Sbjct: 164 KILDFGLARTASTNFMMTPYVVTR----YYRAPEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 108
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 109 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 157
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 158 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 209
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 210 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 110 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 158
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 159 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 210
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 211 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L+ + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLSQVI--QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ T S + + Y +PE NVD++S GV++ E+I
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L+ + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLSQVI--QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ T S + + Y +PE NVD++S GV++ E+I
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 109
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 110 FQLLQGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 158
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 159 TYTHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 210
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 211 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 13/199 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRL 479
+LG F L T V V+ K +V Q +KE EV ++ Q H N+++L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKR-QVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 480 LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
F ++ LV + G L + + A I Q+ G+ ++H N +I+
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIV 171
Query: 540 HCDIKPQNILLDDY---YNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST 596
H D+KP+N+LL+ N +I DFGL+ SK +K I GT Y+A PE + T
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYIA-PEVL-HGT 226
Query: 597 ITANVDVYSFGVLLLEIIS 615
DV+S GV+L ++S
Sbjct: 227 YDEKCDVWSTGVILYILLS 245
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGE-KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLV 492
GV + + + +K L + + + +E E ++ Q + +VRL+G C + + +LV
Sbjct: 355 GVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 413
Query: 493 YKFLNNGTLASFLFENLK--PGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
+ G L FL + P N+ A + Q++ G+ +L +H ++ +N+LL
Sbjct: 414 MEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLE---EKNFVHRNLAARNVLL 469
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+ + A+ISDFGL+K L + S ++ +PE ++ DV+S+GV +
Sbjct: 470 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 529
Query: 611 LEIIS 615
E +S
Sbjct: 530 WEALS 534
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FENLKPG 512
+ FKNEV ++ +T H N++ +G+ + Q +V ++ +L L FE +K
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-- 110
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
+IA Q A+G+ +LH + IIH D+K NI L + +I DFGLA + +
Sbjct: 111 ---LIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 573 KAIKKAIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ + G+ ++A PE R + + DVY+FG++L E+++
Sbjct: 165 SHQFEQLSGSILWMA-PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FENLKPG 512
+ FKNEV ++ +T H N++ +G+ + Q +V ++ +L L FE +K
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-- 133
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
+IA Q A+G+ +LH + IIH D+K NI L + +I DFGLA + +
Sbjct: 134 ---LIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 187
Query: 573 KAIKKAIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ + G+ ++A PE R + + DVY+FG++L E+++
Sbjct: 188 SHQFEQLSGSILWMA-PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 13/199 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRL 479
+LG F L T V V+ K +V Q +KE EV ++ Q H N+++L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKR-QVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 480 LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
F ++ LV + G L + + A I Q+ G+ ++H N +I+
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIV 172
Query: 540 HCDIKPQNILLDDY---YNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST 596
H D+KP+N+LL+ N +I DFGL+ SK +K I GT Y+A PE + T
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYIA-PEVL-HGT 227
Query: 597 ITANVDVYSFGVLLLEIIS 615
DV+S GV+L ++S
Sbjct: 228 YDEKCDVWSTGVILYILLS 246
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FENLKPG 512
+ FKNEV ++ +T H N++ +G+ + Q +V ++ +L L FE +K
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-- 110
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
+IA Q A+G+ +LH + IIH D+K NI L + +I DFGLA + +
Sbjct: 111 ---LIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 573 KAIKKAIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ + G+ ++A PE R + + DVY+FG++L E+++
Sbjct: 165 SHQFEQLSGSILWMA-PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 445 IVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASF 504
+ +++++ Q ++ NE++++ + + N+V L G +V ++L G+L
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 505 LFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLA 564
+ E + A + + + L LH S+Q+IH DIK NILL + +++DFG
Sbjct: 108 VTETCMDEGQIAA-VCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163
Query: 565 KLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
+T QSK + + GT ++A PE VD++S G++ +E+I +
Sbjct: 164 AQITPEQSK--RSTMVGTPYWMA-PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 34/247 (13%)
Query: 447 VKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFC--DEGQNRLLVYKFLNNGTLAS 503
+K L R+ + + E F E +++ H N++ L+G EG +L+ ++ +G L
Sbjct: 54 IKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQ 112
Query: 504 FLFENLK-PGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFG 562
F+ + P + Q+ARG+ +L + +H D+ +N +LD+ + +++DFG
Sbjct: 113 FIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFG 169
Query: 563 LAKLL------TLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
LA+ + ++ Q + + ++ T + E + T DV+SFGVLL E+++
Sbjct: 170 LARDILDREYYSVQQHRHARLPVKWT-----ALESLQTYRFTTKSDVWSFGVLLWELLT- 223
Query: 617 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDP 676
Y + + + L +G + C + L V C + DP
Sbjct: 224 ------RGAPPYRHIDPFDLTHF-------LAQGRRLPQPEY-CPDSLYQVMQQCWEADP 269
Query: 677 SLRPTMR 683
++RPT R
Sbjct: 270 AVRPTFR 276
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FENLKPG 512
+ FKNEV ++ +T H N++ +G+ + Q +V ++ +L L FE +K
Sbjct: 76 QAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-- 132
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
+IA Q A+G+ +LH + IIH D+K NI L + +I DFGLA + +
Sbjct: 133 ---LIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 186
Query: 573 KAIKKAIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ + G+ ++A PE R + + DVY+FG++L E+++
Sbjct: 187 SHQFEQLSGSILWMA-PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 231
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 450 LDRVFQDGEKE-----FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASF 504
L R+ D E E E+ ++ + +H N+V L+ + LV++F+ L
Sbjct: 50 LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKV 108
Query: 505 LFENLKPGWNLRANI-AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
L EN + + I +Q+ RG+ H H +I+H D+KPQN+L++ +++DFGL
Sbjct: 109 LDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGL 165
Query: 564 AKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
A+ + + + T Y A + + +VD++S G + E+I+ + F
Sbjct: 166 ARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 13/199 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRL 479
+LG F L T V V+ K +V Q +KE EV ++ Q H N+++L
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISK-RQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 480 LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
F ++ LV + G L + + A I Q+ G+ ++H N +I+
Sbjct: 98 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIV 154
Query: 540 HCDIKPQNILLDDY---YNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST 596
H D+KP+N+LL+ N +I DFGL+ SK +K I GT Y+A PE + T
Sbjct: 155 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYIA-PEVL-HGT 209
Query: 597 ITANVDVYSFGVLLLEIIS 615
DV+S GV+L ++S
Sbjct: 210 YDEKCDVWSTGVILYILLS 228
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FENLKPG 512
+ FKNEV ++ +T H N++ +G+ + Q +V ++ +L L FE +K
Sbjct: 51 QAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-- 107
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
+IA Q A+G+ +LH + IIH D+K NI L + +I DFGLA + +
Sbjct: 108 ---LIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 161
Query: 573 KAIKKAIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ + G+ ++A PE R + + DVY+FG++L E+++
Sbjct: 162 SHQFEQLSGSILWMA-PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FENLKPG 512
+ FKNEV ++ +T H N++ +G+ + Q +V ++ +L L FE +K
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-- 105
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
+IA Q A+G+ +LH + IIH D+K NI L + +I DFGLA + +
Sbjct: 106 ---LIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 573 KAIKKAIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ + G+ ++A PE R + + DVY+FG++L E+++
Sbjct: 160 SHQFEQLSGSILWMA-PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 450 LDRVFQDGEKE-----FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASF 504
L R+ D E E E+ ++ + +H N+V L+ + LV++F+ L
Sbjct: 50 LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKV 108
Query: 505 LFENLKPGWNLRANI-AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGL 563
L EN + + I +Q+ RG+ H H +I+H D+KPQN+L++ +++DFGL
Sbjct: 109 LDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGL 165
Query: 564 AKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
A+ + + + T Y A + + +VD++S G + E+I+ + F
Sbjct: 166 ARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 23/231 (9%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA 520
F E ++ H LV+L + + ++ +F+ G+L FL + L I
Sbjct: 57 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 115
Query: 521 F--QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
F QIA G+ + IH D++ NIL+ +I+DFGLA+++ N+ A + A
Sbjct: 116 FSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 172
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
K +PE + T DV+SFG+LL+EI++ + +
Sbjct: 173 KFPIKW--TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI---------------PYPG 215
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E C E+L + + C + P RPT + +L
Sbjct: 216 MSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYL 112
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 113 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 161
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 162 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 213
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 214 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 445 IVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASF 504
+ +++++ Q ++ NE++++ + + N+V L G +V ++L G+L
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 505 LFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLA 564
+ E + A + + + L LH S+Q+IH DIK NILL + +++DFG
Sbjct: 108 VTETCMDEGQIAA-VCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163
Query: 565 KLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
+T QSK + + GT ++A PE VD++S G++ +E+I +
Sbjct: 164 AQITPEQSK--RSEMVGTPYWMA-PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFEN-LKPGWNLRA 517
+ FKNEV ++ +T H N++ +G+ + Q +V ++ +L L + K
Sbjct: 65 QAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLI 123
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
+IA Q ARG+ +LH IIH D+K NI L + +I DFGLA + +
Sbjct: 124 DIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 578 AIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ G+ ++A PE R ++ + DVY+FG++L E+++
Sbjct: 181 QLSGSILWMA-PEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 28/207 (13%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKL--------DRVFQDGEKEFKNEVVMIGQTY 472
+LG F LV I S + +K L DRV E++ EV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV------N 84
Query: 473 HKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF---QIARGLL 528
H +V+L F EG+ L+ FL G L + L + + ++ F ++A L
Sbjct: 85 HPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALD 140
Query: 529 HLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVAS 588
HLH S II+ D+KP+NILLD+ + +++DFGL+K ++ KA + GT Y+A
Sbjct: 141 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY--SFCGTVEYMA- 194
Query: 589 PEWFRNSTITANVDVYSFGVLLLEIIS 615
PE T + D +SFGVL+ E+++
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 13/199 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRL 479
+LG F L T V V+ K +V Q +KE EV ++ Q H N+++L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKR-QVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 480 LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
F ++ LV + G L + + A I Q+ G+ ++H N +I+
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIV 148
Query: 540 HCDIKPQNILLDDY---YNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST 596
H D+KP+N+LL+ N +I DFGL+ SK +K I GT Y+A PE + T
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYIA-PEVL-HGT 203
Query: 597 ITANVDVYSFGVLLLEIIS 615
DV+S GV+L ++S
Sbjct: 204 YDEKCDVWSTGVILYILLS 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 445 IVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASF 504
+ +++++ Q ++ NE++++ + + N+V L G +V ++L G+L
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 505 LFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLA 564
+ E + A + + + L LH S+Q+IH DIK NILL + +++DFG
Sbjct: 108 VTETCMDEGQIAA-VCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163
Query: 565 KLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
+T QSK + + GT ++A PE VD++S G++ +E+I +
Sbjct: 164 AQITPEQSK--RSXMVGTPYWMA-PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 445 IVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASF 504
+ VK +D Q + NEVV++ H N+V + G+ ++ +FL G L
Sbjct: 73 VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD- 131
Query: 505 LFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLA 564
+ ++ A + + + L +LH + +IH DIK +ILL ++SDFG
Sbjct: 132 IVSQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFC 188
Query: 565 KLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
++ + K +K + GT ++A PE S VD++S G++++E++
Sbjct: 189 AQISKDVPK--RKXLVGTPYWMA-PEVISRSLYATEVDIWSLGIMVIEMV 235
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ E + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 DANLXQVIQMEL---DHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 617 RKSF 620
+ F
Sbjct: 222 KILF 225
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYL 111
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 112 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 160
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 161 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 212
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 213 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 445 IVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASF 504
+ +++++ Q ++ NE++++ + + N+V L G +V ++L G+L
Sbjct: 49 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 108
Query: 505 LFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLA 564
+ E + A + + + L LH S+Q+IH DIK NILL + +++DFG
Sbjct: 109 VTETCMDEGQIAA-VCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 164
Query: 565 KLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
+T QSK + + GT ++A PE VD++S G++ +E+I +
Sbjct: 165 AQITPEQSK--RSXMVGTPYWMA-PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ E + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 105 DANLXQVIQMEL---DHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTL 158
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 159 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214
Query: 617 RKSF 620
+ F
Sbjct: 215 KILF 218
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 111
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KP+N+L++ +++DFGLA +A +R
Sbjct: 112 FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVR 160
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 161 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 212
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 213 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ E + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 DANLXQVIQMEL---DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 617 RKSF 620
+ F
Sbjct: 222 KILF 225
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL 110
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KP+N+L++ +++DFGLA +A +R
Sbjct: 111 FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVR 159
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 160 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 211
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 212 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 8/206 (3%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + + A ++A L + H S ++IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHR 136
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 137 DIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLP-PEMIEGRMHDEKV 191
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE 627
D++S GVL E + F+ +E
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
+K + E+ ++ + H N+++L + LV + + G L + E A
Sbjct: 92 KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA 151
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY---YNAQISDFGLAKLLTLNQSKA 574
+ QI + +LH N I+H D+KP+N+L +I+DFGL+K++ + +
Sbjct: 152 DAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQV 205
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEY 628
+ K + GT GY A PE R VD++S G++ ++ + F E G+++
Sbjct: 206 LMKTVCGTPGYCA-PEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF 258
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 8/206 (3%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q+ + V+ K E + + EV + H N++RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ GT+ L + + A ++A L + H S ++IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHR 136
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+LL +I+DFG +++ + + + GT Y+ PE V
Sbjct: 137 DIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLP-PEMIEGRMHDEKV 191
Query: 602 DVYSFGVLLLEIISCRKSFDIEMGEE 627
D++S GVL E + F+ +E
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 114/269 (42%), Gaps = 42/269 (15%)
Query: 441 RTTVIVVKKL-DRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
+T + +K L D+ +EF++E ++ + H N+V LLG + Q +++ + ++G
Sbjct: 38 QTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG 97
Query: 500 TLASFLF------------------ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
L FL L+P ++ QIA G+ +L S ++H
Sbjct: 98 DLHEFLVMRSPHSDVGSTDDDRTVKSALEP--PDFVHLVAQIAAGMEYL---SSHHVVHK 152
Query: 542 DIKPQNILLDDYYNAQISDFGLAK-LLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN 600
D+ +N+L+ D N +ISD GL + + + K + ++ + +PE + +
Sbjct: 153 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRW--MAPEAIMYGKFSID 210
Query: 601 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 660
D++S+GV+L E+ S Y + + Y N + +++ C
Sbjct: 211 SDIWSYGVVLWEVFS------------YGLQP---YCGYSNQDVVEMIRNRQVLPCPDDC 255
Query: 661 VEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
+ + I C E PS RP + + L
Sbjct: 256 PAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGIPLPLIKSYL 109
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KP+N+L++ +++DFGLA +A +R
Sbjct: 110 FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVR 158
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 159 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 210
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 211 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
Query: 432 LVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLL 491
+V + + ++ VKK+D Q + NEVV++ H+N+V + G +
Sbjct: 89 IVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 148
Query: 492 VYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
V +FL G L + + A + + + L LH + +IH DIK +ILL
Sbjct: 149 VMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLT 204
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLL 611
++SDFG ++ + +K + GT Y +PE VD++S G++++
Sbjct: 205 HDGRVKLSDFGFCAQVSKEVPR--RKXLVGTP-YWMAPELISRLPYGPEVDIWSLGIMVI 261
Query: 612 EIISCRKSF 620
E++ +
Sbjct: 262 EMVDGEPPY 270
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 464 EVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGT---LASFLFENLKPGW--NLRAN 518
E+ ++ + H+N+VRL LV++F++N + S N G NL
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+Q+ +GL H N +I+H D+KPQN+L++ ++ DFGLA+ + + +
Sbjct: 113 FQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV 169
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+ T Y A + T + ++D++S G +L E+I+ + F EE
Sbjct: 170 V--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE 216
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 617 RKSF 620
+ F
Sbjct: 222 KILF 225
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 19/166 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FENLKPG 512
+ FKNEV ++ +T H N++ +G+ Q +V ++ +L L FE +K
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-- 105
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
+IA Q A+G+ +LH + IIH D+K NI L + +I DFGLA + +
Sbjct: 106 ---LIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 573 KAIKKAIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ + G+ ++A PE R + + DVY+FG++L E+++
Sbjct: 160 SHQFEQLSGSILWMA-PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 17/195 (8%)
Query: 445 IVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG-FCDEGQNRLLVYKFLNNGTLAS 503
I +K++ + E+ + HKN+V+ LG F + G ++ + + + G+L++
Sbjct: 50 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ-VPGGSLSA 108
Query: 504 FLFENLKPGWNLRANIAF---QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA-QIS 559
L P + I F QI GL +LH N QI+H DIK N+L++ Y +IS
Sbjct: 109 LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKIS 165
Query: 560 DFGLAKLLT-LNQSKAIKKAIRGTKGYVASPEWFRNST--ITANVDVYSFGVLLLEIISC 616
DFG +K L +N + GT Y+A PE D++S G ++E+ +
Sbjct: 166 DFGTSKRLAGIN---PCTETFTGTLQYMA-PEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
Query: 617 RKSFDIEMGEEYAIL 631
+ F E+GE A +
Sbjct: 222 KPPF-YELGEPQAAM 235
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 7/183 (3%)
Query: 432 LVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLL 491
+V + + ++ VKK+D Q + NEVV++ H+N+V + G +
Sbjct: 166 IVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 225
Query: 492 VYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
V +FL G L + + A + + + L LH +IH DIK +ILL
Sbjct: 226 VMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLHAQG---VIHRDIKSDSILLT 281
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLL 611
++SDFG ++ + +K + GT ++A PE VD++S G++++
Sbjct: 282 HDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMA-PELISRLPYGPEVDIWSLGIMVI 338
Query: 612 EII 614
E++
Sbjct: 339 EMV 341
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 28/207 (13%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKL--------DRVFQDGEKEFKNEVVMIGQTY 472
+LG F LV I S + +K L DRV E++ EV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV------N 84
Query: 473 HKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF---QIARGLL 528
H +V+L F EG+ L+ FL G L + L + + ++ F ++A L
Sbjct: 85 HPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALD 140
Query: 529 HLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVAS 588
HLH S II+ D+KP+NILLD+ + +++DFGL+K ++ KA + GT Y+A
Sbjct: 141 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY--SFCGTVEYMA- 194
Query: 589 PEWFRNSTITANVDVYSFGVLLLEIIS 615
PE T + D +SFGVL+ E+++
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
E EF E ++ H+ LV+L G C + + ++ +++ NG L ++L E ++ + +
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQ 121
Query: 518 NIAF--QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
+ + + +L S Q +H D+ +N L++D ++SDFGL++ + ++
Sbjct: 122 LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---- 174
Query: 576 KKAIRGTKGYV--ASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 633
+ + G+K V + PE S ++ D+++FGVL+ EI S L
Sbjct: 175 ETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGK 219
Query: 634 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMR 683
++ + N + + + + EK+ + C E RPT +
Sbjct: 220 MPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 269
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 462 KNEVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA 520
K E ++ H +V+L F EG+ L+ FL G L + L + + ++
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEV---MFTEEDVK 133
Query: 521 F---QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
F ++A GL HLH S II+ D+KP+NILLD+ + +++DFGL+K ++ KA
Sbjct: 134 FYLAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY-- 188
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
+ GT Y+A PE + + D +S+GVL+ E+++ F
Sbjct: 189 SFCGTVEYMA-PEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 28/207 (13%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKL--------DRVFQDGEKEFKNEVVMIGQTY 472
+LG F LV I S + +K L DRV E++ EV
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV------N 85
Query: 473 HKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF---QIARGLL 528
H +V+L F EG+ L+ FL G L + L + + ++ F ++A L
Sbjct: 86 HPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALD 141
Query: 529 HLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVAS 588
HLH S II+ D+KP+NILLD+ + +++DFGL+K ++ KA + GT Y+A
Sbjct: 142 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY--SFCGTVEYMA- 195
Query: 589 PEWFRNSTITANVDVYSFGVLLLEIIS 615
PE T + D +SFGVL+ E+++
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLT 222
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 12/191 (6%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG+ F L T V + K + + E +NE+ ++ + H+N+V L
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPK--KALKGKESSIENEIAVLRKIKHENIVALED 87
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + LV + ++ G L + E + + Q+ + +LH I+H
Sbjct: 88 IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH---RMGIVHR 144
Query: 542 DIKPQNILL---DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
D+KP+N+L D+ ISDFGL+K + + GT GYVA PE +
Sbjct: 145 DLKPENLLYYSQDEESKIMISDFGLSK---MEGKGDVMSTACGTPGYVA-PEVLAQKPYS 200
Query: 599 ANVDVYSFGVL 609
VD +S GV+
Sbjct: 201 KAVDCWSIGVI 211
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
Query: 432 LVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLL 491
+V + + ++ VKK+D Q + NEVV++ H+N+V + G +
Sbjct: 46 IVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 105
Query: 492 VYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
V +FL G L + + A + + + L LH + +IH DIK +ILL
Sbjct: 106 VMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLT 161
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLL 611
++SDFG ++ + +K + GT ++A PE VD++S G++++
Sbjct: 162 HDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMA-PELISRLPYGPEVDIWSLGIMVI 218
Query: 612 EII 614
E++
Sbjct: 219 EMV 221
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFEN-LKPGWNLRA 517
+ FKNEV ++ +T H N++ +G+ Q +V ++ +L L + K
Sbjct: 65 QAFKNEVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLI 123
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
+IA Q ARG+ +LH IIH D+K NI L + +I DFGLA + +
Sbjct: 124 DIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 578 AIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ G+ ++A PE R ++ + DVY+FG++L E+++
Sbjct: 181 QLSGSILWMA-PEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 93/194 (47%), Gaps = 25/194 (12%)
Query: 441 RTTVIVVKKL-DRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNG 499
+T + +K L D+ +EF++E ++ + H N+V LLG + Q +++ + ++G
Sbjct: 55 QTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG 114
Query: 500 TLASFLFENLKPGWNLRA-----------------NIAFQIARGLLHLHVNCSSQIIHCD 542
L FL P ++ + ++ QIA G+ +L S ++H D
Sbjct: 115 DLHEFLVMR-SPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKD 170
Query: 543 IKPQNILLDDYYNAQISDFGLAK-LLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
+ +N+L+ D N +ISD GL + + + K + ++ + +PE + +
Sbjct: 171 LATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRW--MAPEAIMYGKFSIDS 228
Query: 602 DVYSFGVLLLEIIS 615
D++S+GV+L E+ S
Sbjct: 229 DIWSYGVVLWEVFS 242
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
Query: 432 LVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLL 491
+V + + ++ VKK+D Q + NEVV++ H+N+V + G +
Sbjct: 44 IVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 103
Query: 492 VYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
V +FL G L + + A + + + L LH + +IH DIK +ILL
Sbjct: 104 VMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLT 159
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLL 611
++SDFG ++ + +K + GT ++A PE VD++S G++++
Sbjct: 160 HDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMA-PELISRLPYGPEVDIWSLGIMVI 216
Query: 612 EII 614
E++
Sbjct: 217 EMV 219
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 26/188 (13%)
Query: 445 IVVKKLDRVFQDG--EKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ K E+ ++ H+N++ LL D+ + LV F+
Sbjct: 53 VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM 112
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
GT L ++ K G + + +Q+ +GL ++H ++ IIH D+KP N+ +++
Sbjct: 113 --GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCEL 167
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPE----WFRNSTITANVDVYSFGVLLLE 612
+I DFGLA+ Q+ + T+ Y A PE W R T VD++S G ++ E
Sbjct: 168 KILDFGLAR-----QADSEMXGXVVTRWYRA-PEVILNWMR---YTQTVDIWSVGCIMAE 218
Query: 613 IISCRKSF 620
+I+ + F
Sbjct: 219 MITGKTLF 226
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
Query: 432 LVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLL 491
+V + + ++ VKK+D Q + NEVV++ H+N+V + G +
Sbjct: 39 IVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 98
Query: 492 VYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
V +FL G L + + A + + + L LH + +IH DIK +ILL
Sbjct: 99 VMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLT 154
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLL 611
++SDFG ++ + +K + GT ++A PE VD++S G++++
Sbjct: 155 HDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMA-PELISRLPYGPEVDIWSLGIMVI 211
Query: 612 EII 614
E++
Sbjct: 212 EMV 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
E EF E ++ H+ LV+L G C + + ++ +++ NG L ++L E ++ + +
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQ 121
Query: 518 NIAF--QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQ---S 572
+ + + +L S Q +H D+ +N L++D ++SDFGL++ + ++ S
Sbjct: 122 LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178
Query: 573 KAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 632
K +R + PE S ++ D+++FGVL+ EI S L
Sbjct: 179 VGSKFPVRWS-----PPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LG 218
Query: 633 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMR 683
++ + N + + + + EK+ + C E RPT +
Sbjct: 219 KMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 269
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
Query: 432 LVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLL 491
+V + + ++ VKK+D Q + NEVV++ H+N+V + G +
Sbjct: 35 IVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 94
Query: 492 VYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD 551
V +FL G L + + A + + + L LH + +IH DIK +ILL
Sbjct: 95 VMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLT 150
Query: 552 DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLL 611
++SDFG ++ + +K + GT ++A PE VD++S G++++
Sbjct: 151 HDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMA-PELISRLPYGPEVDIWSLGIMVI 207
Query: 612 EII 614
E++
Sbjct: 208 EMV 210
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDX 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 15/204 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
+G F L I T V ++ K +K F+ EV ++ H N+V+L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 73
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGW--NLRANIAF-QIARGLLHLHVNCSSQI 538
+ + LV ++ + G + +L + GW A F QI + + H I
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAH---GWMKEKEARAKFRQIVSAVQYCH---QKFI 127
Query: 539 IHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
+H D+K +N+LLD N +I+DFG + T G+ Y A+PE F+
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPY-AAPELFQGKKYD 183
Query: 599 A-NVDVYSFGVLLLEIISCRKSFD 621
VDV+S GV+L ++S FD
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 33/229 (14%)
Query: 415 NVTRSVLLGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVVMIGQ 470
N+ +LGS F +N T G+ +T V VK L E+E +E+ M+ Q
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQV-AVKMLKEKADSSEREALMSELKMMTQ 104
Query: 471 T-YHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL-------------FEN---LKPGW 513
H+N+V LLG C L++++ G L ++L +EN L+
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 514 NLRA-------NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKL 566
+L A+Q+A+G+ L +H D+ +N+L+ +I DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 567 LTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ + + ++ R ++A PE T DV+S+G+LL EI S
Sbjct: 222 IMSDSNYVVRGNARLPVKWMA-PESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKSYL 112
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KP+N+L++ +++DFGLA +A +R
Sbjct: 113 FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVR 161
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 162 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 213
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 214 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LGS + L T + +++K V + EV ++ H N+++L
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTS-VSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
F ++ +N LV + G L + +K A I Q+ G+ +LH I+H
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHR 160
Query: 542 DIKPQNILLDDYYN---AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
D+KP+N+LL+ +I DFGL+ + NQ K K GT Y+A PE R
Sbjct: 161 DLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKM--KERLGTAYYIA-PEVLRKK-YD 215
Query: 599 ANVDVYSFGVLLLEIIS 615
DV+S GV+L +++
Sbjct: 216 EKCDVWSIGVILFILLA 232
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 15/194 (7%)
Query: 445 IVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG-FCDEGQNRLLVYKFLNNGTLAS 503
I +K++ + E+ + HKN+V+ LG F + G ++ + + + G+L++
Sbjct: 36 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ-VPGGSLSA 94
Query: 504 FLFENLKPGWNLRANIAF---QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA-QIS 559
L P + I F QI GL +LH N QI+H DIK N+L++ Y +IS
Sbjct: 95 LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKIS 151
Query: 560 DFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST--ITANVDVYSFGVLLLEIISCR 617
DFG +K L + GT Y+A PE D++S G ++E+ + +
Sbjct: 152 DFGTSKRLA--GINPCTETFTGTLQYMA-PEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
Query: 618 KSFDIEMGEEYAIL 631
F E+GE A +
Sbjct: 209 PPF-YELGEPQAAM 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 150 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 203
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 204 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 617 RKSF 620
+ F
Sbjct: 260 KILF 263
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 19/166 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FENLKPG 512
+ FKNEV ++ +T H N++ +G+ + Q +V ++ +L L FE +K
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-- 133
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
+IA Q A+G+ +LH + IIH D+K NI L + +I DFGLA +
Sbjct: 134 ---LIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 187
Query: 573 KAIKKAIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ + G+ ++A PE R + + DVY+FG++L E+++
Sbjct: 188 SHQFEQLSGSILWMA-PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++FL+ L F+ + G L +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKSYL 110
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KP+N+L++ +++DFGLA +A +R
Sbjct: 111 FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVR 159
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 160 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 211
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 212 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 19/166 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FENLKPG 512
+ FKNEV ++ +T H N++ +G+ + Q +V ++ +L L FE +K
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-- 105
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
+IA Q A+G+ +LH + IIH D+K NI L + +I DFGLA +
Sbjct: 106 ---LIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 159
Query: 573 KAIKKAIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ + G+ ++A PE R + + DVY+FG++L E+++
Sbjct: 160 SHQFEQLSGSILWMA-PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 19/166 (11%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL------FENLKPG 512
+ FKNEV ++ +T H N++ +G+ + Q +V ++ +L L FE +K
Sbjct: 69 QAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-- 125
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
+IA Q A+G+ +LH + IIH D+K NI L + +I DFGLA +
Sbjct: 126 ---LIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 179
Query: 573 KAIKKAIRGTKGYVASPEWFR---NSTITANVDVYSFGVLLLEIIS 615
+ + G+ ++A PE R + + DVY+FG++L E+++
Sbjct: 180 SHQFEQLSGSILWMA-PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 112
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 169
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 170 ELKILDFGLA-----------RHTADEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 218 CIMAELLTGRTLF 230
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 473 HKNLVRLLGFCDEGQNR----LLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLL 528
H+NL++ + G N L+ F + G+L +L N+ WN ++A ++RGL
Sbjct: 68 HENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIIT-WNELCHVAETMSRGLS 126
Query: 529 HLHVN---CSSQ-----IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
+LH + C + I H D K +N+LL A ++DFGLA +
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV 186
Query: 581 GTKGYVASPEWFRNST-----ITANVDVYSFGVLLLEIISCRKSFD 621
GT+ Y+A PE + +D+Y+ G++L E++S K+ D
Sbjct: 187 GTRRYMA-PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 112
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 169
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 170 ELKILDFGLA-----------RHTADEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 218 CIMAELLTGRTLF 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 112
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 169
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 170 ELKILDFGLA-----------RHTADEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 218 CIMAELLTGRTLF 230
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
E EF E ++ H+ LV+L G C + + ++ +++ NG L ++L E ++ + +
Sbjct: 54 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQ 112
Query: 518 NIAF--QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQ---S 572
+ + + +L S Q +H D+ +N L++D ++SDFGL++ + ++ S
Sbjct: 113 LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 169
Query: 573 KAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 632
K +R + PE S ++ D+++FGVL+ EI S K
Sbjct: 170 VGSKFPVRWS-----PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM------------- 211
Query: 633 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMR 683
++ + N + + + + EK+ + C E RPT +
Sbjct: 212 --PYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 260
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 150 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 203
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 204 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 617 RKSF 620
+ F
Sbjct: 260 KILF 263
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L+ + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLSQVI--QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ T S + + Y +PE NVD++S G ++ E+I
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 110
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDX 167
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 168 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 216 CIMAELLTGRTLF 228
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 110
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDX 167
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 168 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 216 CIMAELLTGRTLF 228
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 61 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 116
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 117 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDX 173
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 174 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 221
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 222 CIMAELLTGRTLF 234
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
E EF E ++ H+ LV+L G C + + ++ +++ NG L ++L E ++ + +
Sbjct: 47 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQ 105
Query: 518 NIAF--QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQ---S 572
+ + + +L S Q +H D+ +N L++D ++SDFGL++ + ++ S
Sbjct: 106 LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 162
Query: 573 KAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRK 618
K +R + PE S ++ D+++FGVL+ EI S K
Sbjct: 163 VGSKFPVRWS-----PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 203
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 474 KNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF-ENLKPGWNLRANIAFQIARGLLHLHV 532
+N V+ + + + ++ NGTL + ENL + + QI L ++H
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH- 133
Query: 533 NCSSQIIHCDIKPQNILLDDYYNAQISDFGLAK-------LLTLN------QSKAIKKAI 579
S IIH D+KP NI +D+ N +I DFGLAK +L L+ S + AI
Sbjct: 134 --SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
GT YVA+ +D+YS G++ E+I
Sbjct: 192 -GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S ++ + Y +PE NVD++S G ++ E++ C
Sbjct: 166 KILDFGLAR--TAGTSFMMEPEV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV-C 220
Query: 617 RK 618
K
Sbjct: 221 HK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 113 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 166
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 167 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 222
Query: 617 RKSF 620
+ F
Sbjct: 223 KILF 226
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHV 532
H +++ L+ + LV+ + G L +L E + +I + + LH
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA 218
Query: 533 NCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWF 592
N I+H D+KP+NILLDD ++SDFG + L + + + GT GY+A PE
Sbjct: 219 N---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLA-PEIL 271
Query: 593 RNSTITAN------VDVYSFGVLLLEIISCRKSF 620
+ S + VD+++ GV+L +++ F
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
E EF E ++ H+ LV+L G C + + ++ +++ NG L ++L E ++ + +
Sbjct: 48 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQ 106
Query: 518 NIAF--QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQ---S 572
+ + + +L S Q +H D+ +N L++D ++SDFGL++ + ++ S
Sbjct: 107 LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163
Query: 573 KAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 632
K +R + PE S ++ D+++FGVL+ EI S K
Sbjct: 164 VGSKFPVRWS-----PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM------------- 205
Query: 633 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMR 683
++ + N + + + + EK+ + C E RPT +
Sbjct: 206 --PYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 254
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 31/202 (15%)
Query: 444 VIVVKKLDRVFQ---DGEKEFKNEVVMIGQTYHKNLVRLLGF--CDEGQNRLLVYKFLNN 498
V+ VKK+ FQ D ++ F+ +++ + H+N+V LL D ++ LV+ ++
Sbjct: 36 VVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET 95
Query: 499 GTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
A L+P + + +Q+ + + +LH S ++H D+KP NILL+ + ++
Sbjct: 96 DLHAVIRANILEPVH--KQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKV 150
Query: 559 SDFGLAK------------LLTLNQS-------KAIKKAIRGTKGYVASPEWFRNST-IT 598
+DFGL++ L++N++ + I T+ Y A PE ST T
Sbjct: 151 ADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRA-PEILLGSTKYT 209
Query: 599 ANVDVYSFGVLLLEIISCRKSF 620
+D++S G +L EI+ + F
Sbjct: 210 KGIDMWSLGCILGEILCGKPIF 231
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
I VKKL R FQ K E+ ++ H+N++ LL + + N+ L
Sbjct: 79 IAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATS----LEEFNDVYLV 134
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 135 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 191
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA+ + GYVA+ W+R I N VD++S G
Sbjct: 192 ELKILDFGLARHTDDEMT-----------GYVAT-RWYRAPEIMLNWMHYNMTVDIWSVG 239
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 240 CIMAELLTGRTLF 252
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 104/239 (43%), Gaps = 43/239 (17%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKF-LNNGTLASFLFENLKPGWNLRANIAF-------QIA 524
H N++R +C E +R L L N L + NL+ + QIA
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 525 RGLLHLHVNCSSQIIHCDIKPQNILL--------DDYYNAQ-----ISDFGLAKLLTLNQ 571
G+ HLH S +IIH D+KPQNIL+ D A+ ISDFGL K L Q
Sbjct: 144 SGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 572 S--KAIKKAIRGTKGYVASPEWFRNST---ITANVDVYSFGVLLLEIISCRKSFDIEMGE 626
+ GT G+ A PE ST +T ++D++S G + I+S K G+
Sbjct: 201 XXFRXNLNNPSGTSGWRA-PELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH---PFGD 256
Query: 627 EYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
+Y+ ++ + LD +M+ ++D + + + I DP RPT KV
Sbjct: 257 KYSRESNIIRGIF---SLD-----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 34/226 (15%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKF-LNNGTLASFLFENLKPGWNLRA-NIAFQIARGLLHL 530
H N++R FC E + L TL ++ + L + Q GL HL
Sbjct: 77 HPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134
Query: 531 HVNCSSQIIHCDIKPQNILL-----DDYYNAQISDFGLAKLLTL-NQSKAIKKAIRGTKG 584
H S I+H D+KP NIL+ A ISDFGL K L + S + + + GT+G
Sbjct: 135 H---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG 191
Query: 585 YVASPEWFRN---STITANVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTD-WAFDCY 639
++A PE T VD++S G + +IS F + + IL + DC
Sbjct: 192 WIA-PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCL 250
Query: 640 RNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
K +D++ ++ +EK++ + DP RP+ + V
Sbjct: 251 HPEKHEDVIAREL--------IEKMIAM-------DPQKRPSAKHV 281
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F L T + + ++ K D + + E+ + H ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
++V ++ N L ++ + K QI + + H +I+H
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHR 136
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+KP+N+LLD++ N +I+DFGL+ ++T K G+ Y A+PE
Sbjct: 137 DLKPENLLLDEHLNVKIADFGLSNIMT---DGNFLKTSCGSPNY-AAPEVISGKLYAGPE 192
Query: 601 VDVYSFGVLLLEIISCRKSFDIE 623
VDV+S GV+L ++ R FD E
Sbjct: 193 VDVWSCGVILYVMLCRRLPFDDE 215
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 617 RKSF 620
+ F
Sbjct: 222 KILF 225
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F L T + + ++ K D + + E+ + H ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
++V ++ N L ++ + K QI + + H +I+H
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+KP+N+LLD++ N +I+DFGL+ ++T K G+ Y A+PE
Sbjct: 138 DLKPENLLLDEHLNVKIADFGLSNIMT---DGNFLKTSCGSPNY-AAPEVISGKLYAGPE 193
Query: 601 VDVYSFGVLLLEIISCRKSFDIE 623
VDV+S GV+L ++ R FD E
Sbjct: 194 VDVWSCGVILYVMLCRRLPFDDE 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 113 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 166
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 167 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 222
Query: 617 RKSF 620
+ F
Sbjct: 223 KILF 226
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 111 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 164
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 165 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 220
Query: 617 RKSF 620
+ F
Sbjct: 221 KILF 224
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 107
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDS 164
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 165 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 213 CIMAELLTGRTLF 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 111
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDS 168
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 169 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 217 CIMAELLTGRTLF 229
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 617 RKSF 620
+ F
Sbjct: 222 KILF 225
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 34/284 (11%)
Query: 411 RNMMNVTRSVLLGSSVFVNFTLVGVIQTSTRTTVIVVK--KLDRVFQDGEKEFKNEVVMI 468
RN++ + + +LG F + + Q + + VK KLD Q +EF +E +
Sbjct: 33 RNLLILGK--ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90
Query: 469 GQTYHKNLVRLLGFCDEGQNR-----LLVYKFLNNGTLASF-LFENLKPGWN---LRANI 519
H N++RLLG C E ++ +++ F+ G L ++ L+ L+ G L+ +
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 520 AFQ--IARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
F IA G+ +L + +H D+ +N +L D ++DFGL+K + +
Sbjct: 151 KFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGR 207
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A E + T+ DV++FGV + EI + + G + + D+
Sbjct: 208 IAKMPVKWIAI-ESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEMYDYLLH 264
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPT 681
+R + +D C+++L + C + DP RPT
Sbjct: 265 GHRLKQPED-------------CLDELYEIMYSCWRTDPLDRPT 295
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L+ + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLSQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ T S + + Y +PE NVD++S G ++ E+I
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 105 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 158
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 159 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214
Query: 617 RKSF 620
+ F
Sbjct: 215 KILF 218
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 457 GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR 516
E EF E ++ H+ LV+L G C + + ++ +++ NG L ++L E ++ + +
Sbjct: 42 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQ 100
Query: 517 ANIAF--QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQ--- 571
+ + + +L S Q +H D+ +N L++D ++SDFGL++ + ++
Sbjct: 101 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 157
Query: 572 SKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRK 618
S K +R + PE S ++ D+++FGVL+ EI S K
Sbjct: 158 SVGSKFPVRWS-----PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 199
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 106 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 159
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 160 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 215
Query: 617 RKSF 620
+ F
Sbjct: 216 KILF 219
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 104/239 (43%), Gaps = 43/239 (17%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKF-LNNGTLASFLFENLKPGWNLRANIAF-------QIA 524
H N++R +C E +R L L N L + NL+ + QIA
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 525 RGLLHLHVNCSSQIIHCDIKPQNILL--------DDYYNAQ-----ISDFGLAKLLTLNQ 571
G+ HLH S +IIH D+KPQNIL+ D A+ ISDFGL K L Q
Sbjct: 144 SGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 572 S--KAIKKAIRGTKGYVASPEWFRNST---ITANVDVYSFGVLLLEIISCRKSFDIEMGE 626
+ GT G+ A PE ST +T ++D++S G + I+S K G+
Sbjct: 201 XXFRXNLNNPSGTSGWRA-PELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH---PFGD 256
Query: 627 EYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
+Y+ ++ + LD +M+ ++D + + + I DP RPT KV
Sbjct: 257 KYSRESNIIRGIF---SLD-----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F L T + + ++ K D + + E+ + H ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
++V ++ N L ++ + K QI + + H +I+H
Sbjct: 76 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHR 131
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+KP+N+LLD++ N +I+DFGL+ ++T K G+ Y A+PE
Sbjct: 132 DLKPENLLLDEHLNVKIADFGLSNIMT---DGNFLKTSCGSPNY-AAPEVISGKLYAGPE 187
Query: 601 VDVYSFGVLLLEIISCRKSFDIE 623
VDV+S GV+L ++ R FD E
Sbjct: 188 VDVWSCGVILYVMLCRRLPFDDE 210
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ LV + +
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 106 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 159
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++
Sbjct: 160 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 215
Query: 617 RKSF 620
+ F
Sbjct: 216 KILF 219
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
+G F L I T V ++ K +K F+ EV ++ H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + LV ++ + G + +L + + QI + + H I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---QKFIVHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+K +N+LLD N +I+DFG + T A G Y A+PE F+
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDAFCGAPPY-AAPELFQGKKYDGPE 193
Query: 601 VDVYSFGVLLLEIISCRKSFD 621
VDV+S GV+L ++S FD
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 62 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 117
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 118 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 174
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 175 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 223 CIMAELLTGRTLF 235
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 62 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 117
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 118 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 174
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 175 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 223 CIMAELLTGRTLF 235
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 445 IVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASF 504
+ +++++ Q ++ NE++++ + + N+V L G +V ++L G+L
Sbjct: 49 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 108
Query: 505 LFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLA 564
+ E + A + + + L LH S+Q+IH +IK NILL + +++DFG
Sbjct: 109 VTETCMDEGQIAA-VCRECLQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFC 164
Query: 565 KLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
+T QSK + + GT ++A PE VD++S G++ +E+I +
Sbjct: 165 AQITPEQSK--RSTMVGTPYWMA-PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
+G F L I T + ++ K +K F+ EV ++ H N+V+L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ + G + +L + + + QI + + H +I+H
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHR 138
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+K +N+LLD N +I+DFG + T+ A G Y A+PE F+
Sbjct: 139 DLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPY-AAPELFQGKKYDGPE 194
Query: 601 VDVYSFGVLLLEIISCRKSFD 621
VDV+S GV+L ++S FD
Sbjct: 195 VDVWSLGVILYTLVSGSLPFD 215
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F L T + + ++ K D + + E+ + H ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
++V ++ N L ++ + K QI + + H +I+H
Sbjct: 72 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHR 127
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+KP+N+LLD++ N +I+DFGL+ ++T K G+ Y A+PE
Sbjct: 128 DLKPENLLLDEHLNVKIADFGLSNIMT---DGNFLKTSCGSPNY-AAPEVISGKLYAGPE 183
Query: 601 VDVYSFGVLLLEIISCRKSFDIE 623
VDV+S GV+L ++ R FD E
Sbjct: 184 VDVWSCGVILYVMLCRRLPFDDE 206
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 107
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 164
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 165 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 213 CIMAELLTGRTLF 225
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 15/219 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE--FKNEVVMIGQTYHKNLVR 478
+LG F L V +T V V+KK D + QD + E + ++ H L +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKK-DVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 479 LLGFCDEGQNRLL-VYKFLNNGTLASFLFENLKPGWNLRANI-AFQIARGLLHLHVNCSS 536
L C + +RL V +F+N G L F + + RA A +I L+ LH
Sbjct: 89 LFC-CFQTPDRLFFVMEFVNGGDLM-FHIQKSRRFDEARARFYAAEIISALMFLH---DK 143
Query: 537 QIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST 596
II+ D+K N+LLD + +++DFG+ K N GT Y+A PE +
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN--GVTTATFCGTPDYIA-PEILQEML 200
Query: 597 ITANVDVYSFGVLLLEIISCRKSFDIEMGEEY--AILTD 633
VD ++ GVLL E++ F+ E ++ AIL D
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 239
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 494 KFLNNGTLASFLFENLKPGWNLRANIAF----QIARGLLHLHVNCSSQIIHCDIKPQNIL 549
+F + GTL ++ + G L +A QI +G+ ++H S ++IH D+KP NI
Sbjct: 114 EFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIF 168
Query: 550 LDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVL 609
L D +I DFGL L N K + +GT Y+ SPE + VD+Y+ G++
Sbjct: 169 LVDTKQVKIGDFGLVTSLK-NDGKRTRS--KGTLRYM-SPEQISSQDYGKEVDLYALGLI 224
Query: 610 LLEIIS-CRKSFD 621
L E++ C +F+
Sbjct: 225 LAELLHVCDTAFE 237
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 107
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 164
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 165 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 213 CIMAELLTGRTLF 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++ ++ L +F+ + G L +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQD-LKTFMDASALTGIPLPLIKSYL 108
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 109 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 157
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 158 TYTHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 209
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 210 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 73 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 128
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 129 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 185
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 186 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 233
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 234 CIMAELLTGRTLF 246
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 111
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 168
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 169 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 217 CIMAELLTGRTLF 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNAMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 61 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 116
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 117 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 173
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 174 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 221
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 222 CIMAELLTGRTLF 234
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 70 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 125
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 182
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 183 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 230
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 231 CIMAELLTGRTLF 243
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 110
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 167
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 168 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 216 CIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 49 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 104
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 105 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 161
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 162 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 209
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 210 CIMAELLTGRTLF 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 112
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 169
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 170 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 218 CIMAELLTGRTLF 230
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S ++ + Y +PE NVD++S G ++ E++ C
Sbjct: 166 KILDFGLAR--TAGTSFMMEPEV--VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV-C 220
Query: 617 RK 618
K
Sbjct: 221 HK 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 73 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 128
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 129 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 185
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 186 ELKILDFGLA-----------RHTDDEMXGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 233
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 234 CIMAELLTGRTLF 246
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 69 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 124
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 125 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 181
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 182 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 229
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 230 CIMAELLTGRTLF 242
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ T S + + Y +PE NVD++S G ++ E+I
Sbjct: 166 KILDFGLAR--TAGTSFMMTPEV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 107
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 164
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 165 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 213 CIMAELLTGRTLF 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 47 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 102
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 103 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 159
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 160 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 207
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 208 CIMAELLTGRTLF 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 48 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 103
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 104 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 160
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 161 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 208
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 209 CIMAELLTGRTLF 221
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 532 VNCSSQ--IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK-KAIRGTKGYVAS 588
+N S Q IIH D+KP NIL+ ++ DFG+A+ + + + + A+ GT Y+ S
Sbjct: 129 LNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL-S 187
Query: 589 PEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
PE R ++ A DVYS G +L E+++ F
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 69 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 124
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 125 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 181
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA+ + GYVA+ W+R I N VD++S G
Sbjct: 182 ELKILDFGLARHTDDEMT-----------GYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 229
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 230 CIMAELLTGRTLF 242
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 110
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 167
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 168 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 216 CIMAELLTGRTLF 228
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 101
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 158
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 159 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 207 CIMAELLTGRTLF 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L+ + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLSQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ T S + + Y +PE NVD++S G ++ E+I
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 47 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 102
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 103 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 159
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 160 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 207
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 208 CIMAELLTGRTLF 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 70 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 125
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 182
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 183 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 230
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 231 CIMAELLTGRTLF 243
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 60 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 115
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 116 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 172
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 173 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 220
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 221 CIMAELLTGRTLF 233
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 101
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 102 THLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 158
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA+ + GYVA+ W+R I N VD++S G
Sbjct: 159 ELKILDFGLARHTDDEMT-----------GYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 207 CIMAELLTGRTLF 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 101
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 158
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 159 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 207 CIMAELLTGRTLF 219
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 111
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 168
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 169 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 217 CIMAELLTGRTLF 229
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L+ + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLSQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ T S + + Y +PE NVD++S G ++ E+I
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 9/201 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
+G F L I T V ++ K +K F+ EV + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFE 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + LV ++ + G + +L + + QI + + H I+H
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+K +N+LLD N +I+DFG + T A G Y A+PE F+
Sbjct: 138 DLKAENLLLDADXNIKIADFGFSNEFTFGNK---LDAFCGAPPY-AAPELFQGKKYDGPE 193
Query: 601 VDVYSFGVLLLEIISCRKSFD 621
VDV+S GV+L ++S FD
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY----NAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPAFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 532 VNCSSQ--IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK-KAIRGTKGYVAS 588
+N S Q IIH D+KP NI++ ++ DFG+A+ + + + + A+ GT Y+ S
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL-S 187
Query: 589 PEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
PE R ++ A DVYS G +L E+++ F
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
+ + E+ + H ++++L + +V ++++ G L ++ +N + +
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRL 121
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
QI G+ + H ++H D+KP+N+LLD + NA+I+DFGL+ +++ + +
Sbjct: 122 FQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXS 175
Query: 580 RGTKGYVASPEWFRNSTITA-NVDVYSFGVLLLEIISCRKSFD 621
G+ Y A+PE VD++S GV+L ++ FD
Sbjct: 176 CGSPNY-AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDS 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGL + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLC-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 532 VNCSSQ--IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK-KAIRGTKGYVAS 588
+N S Q IIH D+KP NI++ ++ DFG+A+ + + + + A+ GT Y+ S
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL-S 187
Query: 589 PEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
PE R ++ A DVYS G +L E+++ F
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 111
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 168
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 169 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 217 CIMAELLTGRTLF 229
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 532 VNCSSQ--IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK-KAIRGTKGYVAS 588
+N S Q IIH D+KP NI++ ++ DFG+A+ + + + + A+ GT Y+ S
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL-S 187
Query: 589 PEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
PE R ++ A DVYS G +L E+++ F
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 21/228 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENL-KPGWNLRA 517
KE +E ++ + RLLG C +L V + + G L + EN + G
Sbjct: 64 KEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLL 122
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLA+LL +++++
Sbjct: 123 NWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD 179
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A R T DV+S+GV + E+++ +D
Sbjct: 180 GGKVPIKWMALESILRRR-FTHQSDVWSYGVTVWELMTFGAK---------------PYD 223
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
++ DL+E C + M+ + C D RP R++
Sbjct: 224 GIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFREL 271
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 33/209 (15%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--ANIA 520
E+ ++ + H N+V+LL LV++ ++ L F+ + G L +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQD-LKKFMDASALTGIPLPLIKSYL 112
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
FQ+ +GL H S +++H D+KPQN+L++ +++DFGLA +A +R
Sbjct: 113 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVR 161
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 631
V + W+R I + VD++S G + E+++ R F D E+
Sbjct: 162 TYXHEVVT-LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------- 213
Query: 632 TDWAFDCYRN-GKLDDLVEGDMEAMNDIK 659
D F +R G D++V + +M D K
Sbjct: 214 -DQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 97/215 (45%), Gaps = 15/215 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRL 479
+LG F L T V V+ K +V Q +KE EV ++ Q H N+ +L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKR-QVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 480 LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
F ++ LV + G L + + A I Q+ G+ + H N +I+
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN---KIV 148
Query: 540 HCDIKPQNILLDDY---YNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST 596
H D+KP+N+LL+ N +I DFGL+ SK K I GT Y+A PE + T
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKXKDKI-GTAYYIA-PEVL-HGT 203
Query: 597 ITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 631
DV+S GV+L ++S F+ EY IL
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFN--GANEYDIL 236
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 532 VNCSSQ--IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK-KAIRGTKGYVAS 588
+N S Q IIH D+KP NI++ ++ DFG+A+ + + + + A+ GT Y+ S
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL-S 187
Query: 589 PEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
PE R ++ A DVYS G +L E+++ F
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 113 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 166
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ T S + + Y +PE NVD++S G ++ E+I
Sbjct: 167 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE--FKNEVVMIGQTYHKNLVR 478
+LG F L +T+ + +KK D V D + E + V+ H L
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 479 LLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQI 538
+ +N V ++LN G L + K + A +I GL LH S I
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGI 139
Query: 539 IHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
++ D+K NILLD + +I+DFG+ K L +K GT Y+A PE
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NXFCGTPDYIA-PEILLGQKYN 196
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+VD +SFGVLL E++ + F + EE
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHGQDEEE 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 532 VNCSSQ--IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK-KAIRGTKGYVAS 588
+N S Q IIH D+KP NI++ ++ DFG+A+ + + + + A+ GT Y+ S
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL-S 204
Query: 589 PEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
PE R ++ A DVYS G +L E+++ F
Sbjct: 205 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ T S + + Y +PE NVD++S G ++ E+I
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKE--FKNEVVMIGQTYHKNLVR 478
+LG F L +T+ + +KK D V D + E + V+ H L
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 479 LLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQI 538
+ +N V ++LN G L + K + A +I GL LH S I
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGI 140
Query: 539 IHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
++ D+K NILLD + +I+DFG+ K L +K GT Y+A PE
Sbjct: 141 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NEFCGTPDYIA-PEILLGQKYN 197
Query: 599 ANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+VD +SFGVLL E++ + F + EE
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDEEE 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 28/189 (14%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ + E+ ++ H+N++ LL + + TL
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 503 SFLFENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
N+ L + +Q+ RGL ++H S+ IIH D+KP N+ +++ +I
Sbjct: 116 GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRI 172
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFGVLLL 611
DFGLA ++A GYVA+ W+R I N VD++S G ++
Sbjct: 173 LDFGLA-----------RQADEEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 612 EIISCRKSF 620
E++ + F
Sbjct: 221 ELLQGKALF 229
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY----YNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 118 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 172
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 173 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY----YNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY----YNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 118 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 172
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 173 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY----YNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 112 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ T S + + Y +PE NVD++S G ++ E+I
Sbjct: 166 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY----NAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY----YNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 116
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 117 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 170
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++ C
Sbjct: 171 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV-C 225
Query: 617 RK 618
K
Sbjct: 226 HK 227
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 9/201 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
+G F L + T V ++ K +K F+ EV ++ H N+V+L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + LV ++ + G + +L + + QI + + H I+H
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---QKYIVHR 138
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+K +N+LLD N +I+DFG + T+ G+ Y A+PE F+
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFSNEFTVGNK---LDTFCGSPPY-AAPELFQGKKYDGPE 194
Query: 601 VDVYSFGVLLLEIISCRKSFD 621
VDV+S GV+L ++S FD
Sbjct: 195 VDVWSLGVILYTLVSGSLPFD 215
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY----YNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
+G F L I T + ++ K +K F+ EV ++ H N+V+L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 78
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + L+ ++ + G + +L + + + QI + + H +I+H
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHR 135
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+K +N+LLD N +I+DFG + T+ G+ Y A+PE F+
Sbjct: 136 DLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDTFCGSPPY-AAPELFQGKKYDGPE 191
Query: 601 VDVYSFGVLLLEIISCRKSFD 621
VDV+S GV+L ++S FD
Sbjct: 192 VDVWSLGVILYTLVSGSLPFD 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY----YNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY----YNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL + FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 62 VAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 117
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 118 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 174
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + GYVA+ W+R I N VD++S G
Sbjct: 175 ELKILDFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 223 CIMAELLTGRTLF 235
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 8/200 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q + V+ K + E + + E+ + H N++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + + L+ +F G L L ++ + A ++A L + H ++IH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHR 138
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+L+ +I+DFG +++ ++ + GT Y+ PE T V
Sbjct: 139 DIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLP-PEMIEGKTHDEKV 193
Query: 602 DVYSFGVLLLEIISCRKSFD 621
D++ GVL E + FD
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD 213
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEY 187
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 188 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I D+GLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDYGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 8/200 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q + V+ K + E + + E+ + H N++R+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + + L+ +F G L L ++ + A ++A L + H ++IH
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHR 139
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+L+ +I+DFG +++ ++ + GT Y+ PE T V
Sbjct: 140 DIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLP-PEMIEGKTHDEKV 194
Query: 602 DVYSFGVLLLEIISCRKSFD 621
D++ GVL E + FD
Sbjct: 195 DLWCAGVLCYEFLVGMPPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
+G F L I T V ++ K +K F+ EV ++ H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + LV ++ + G + +L + + QI + + H I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---QKFIVHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+K +N+LLD N +I+DFG + T G+ Y A+PE F+
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPY-AAPELFQGKKYDGPE 193
Query: 601 VDVYSFGVLLLEIISCRKSFD 621
VDV+S GV+L ++S FD
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
+G F L I T V ++ K +K F+ EV ++ H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + LV ++ + G + +L + + QI + + H I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---QKFIVHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+K +N+LLD N +I+DFG + T G+ Y A+PE F+
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPY-AAPELFQGKKYDGPE 193
Query: 601 VDVYSFGVLLLEIISCRKSFD 621
VDV+S GV+L ++S FD
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPG---WNLRAN 518
+ E+ ++ Q + R G + ++ ++L G+ L KPG A
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIAT 120
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
I +I +GL +LH S + IH DIK N+LL + + +++DFG+A LT Q K +
Sbjct: 121 ILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNX 175
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEI 613
GT ++A PE + S D++S G+ +E+
Sbjct: 176 FVGTPFWMA-PEVIKQSAYDFKADIWSLGITAIEL 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
+G F L I T V ++ K +K F+ EV ++ H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + LV ++ + G + +L + + QI + + H I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---QKFIVHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+K +N+LLD N +I+DFG + T G+ Y A+PE F+
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPY-AAPELFQGKKYDGPE 193
Query: 601 VDVYSFGVLLLEIISCRKSFD 621
VDV+S GV+L ++S FD
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 105
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 106 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 159
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISC 616
+I DFGLA+ T S + + Y +PE NVD++S G ++ E++ C
Sbjct: 160 KILDFGLAR--TAGTSFMMTPYV--VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV-C 214
Query: 617 RK 618
K
Sbjct: 215 HK 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY----NAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
+G F L I T V ++ K +K F+ EV ++ H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + LV ++ + G + +L + + QI + + H I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-N 600
D+K +N+LLD N +I+DFG + T G+ Y A+PE F+
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPY-AAPELFQGKKYDGPE 193
Query: 601 VDVYSFGVLLLEIISCRKSFD 621
VDV+S GV+L ++S FD
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 188 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 11/177 (6%)
Query: 455 QDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL-ASFLFENLKPG 512
+ +KE + E+ + H LV L ++ +++Y+F++ G L E+ K
Sbjct: 194 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMS 253
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQIS--DFGLAKLLTLN 570
+ Q+ +GL H+H N +H D+KP+NI+ + ++ DFGL L
Sbjct: 254 EDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310
Query: 571 QSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
QS K GT + A+PE + D++S GVL ++S F E +E
Sbjct: 311 QS---VKVTTGTAEF-AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY----NAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 188 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 20/183 (10%)
Query: 464 EVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQI 523
EV ++ + H N+++L ++ + +V + G L + + + + A I Q+
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 524 ARGLLHLHVNCSSQIIHCDIKPQNILLDDYY---NAQISDFGLAKLLTLNQSKAIKKAIR 580
G+ ++H I+H D+KP+NILL+ + +I DFGL+ Q+ +K I
Sbjct: 131 FSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST--CFQQNTKMKDRI- 184
Query: 581 GTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGE-EYAILT-----DW 634
GT Y+A PE R T DV+S GV+L ++S F G+ EY IL +
Sbjct: 185 GTAYYIA-PEVLRG-TYDEKCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGKY 239
Query: 635 AFD 637
AFD
Sbjct: 240 AFD 242
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 192 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 104/243 (42%), Gaps = 47/243 (19%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKF-LNNGTLASFLFENLKPGWNLRANIAF-------QIA 524
H N++R +C E +R L L N L + NL+ + QIA
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 525 RGLLHLHVNCSSQIIHCDIKPQNILL--------DDYYNAQ-----ISDFGLAKLLTLNQ 571
G+ HLH S +IIH D+KPQNIL+ D A+ ISDFGL K L Q
Sbjct: 126 SGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 572 S--KAIKKAIRGTKGYVASPEWFRNST-------ITANVDVYSFGVLLLEIISCRKSFDI 622
S + GT G+ A PE S +T ++D++S G + I+S K
Sbjct: 183 SSFRTNLNNPSGTSGWRA-PELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH--- 238
Query: 623 EMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTM 682
G++Y+ ++ + LD +M+ ++D + + + I DP RPT
Sbjct: 239 PFGDKYSRESNIIRGIF---SLD-----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 683 RKV 685
KV
Sbjct: 291 MKV 293
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK-AIKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 151 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 208 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 192 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 8/200 (4%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F N L Q + V+ K + E + + E+ + H N++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ + + L+ +F G L L ++ + A ++A L + H ++IH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHR 138
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
DIKP+N+L+ +I+DFG +++ ++ + GT Y+ PE T V
Sbjct: 139 DIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLP-PEMIEGKTHDEKV 193
Query: 602 DVYSFGVLLLEIISCRKSFD 621
D++ GVL E + FD
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 45/206 (21%)
Query: 443 TVIVVKKL-DRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
T++ VK L + D + +F+ E ++ + + N+V+LLG C G+ L+++++ G L
Sbjct: 78 TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
Query: 502 ASFLFENLKP---------GWNLRAN----------------IAFQIARGLLHLHVNCSS 536
FL ++ P + RA IA Q+A G+ +L
Sbjct: 138 NEFL-RSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ER 193
Query: 537 QIIHCDIKPQNILLDDYYNAQISDFGLAK-LLTLNQSKAIKKAIRGTKGYVASP-EWFRN 594
+ +H D+ +N L+ + +I+DFGL++ + + + KA G A P W
Sbjct: 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA--------DGNDAIPIRWMPP 245
Query: 595 STI-----TANVDVYSFGVLLLEIIS 615
+I T DV+++GV+L EI S
Sbjct: 246 ESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGF------CDEGQNRLLVYKFL 496
+ +KKL R FQ+ K E+V++ HKN++ LL +E Q+ +V + +
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 497 NNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
+ L + ++ + + +Q+ G+ HLH S+ IIH D+KP NI++
Sbjct: 114 D-ANLCQVI--QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 167
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+I DFGLA+ T S + + Y +PE NVD++S G ++ E+I
Sbjct: 168 KILDFGLAR--TAGTSFMMVPFV--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 221
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY----NAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+FQ+A+G+ L S + IH D+ +NILL + +I DFGLA+ + + K
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 637
R ++A PE + T DV+SFGVLL EI S S +++ EE+
Sbjct: 263 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 312
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
C R L EG D E + + C +PS RPT ++ + L
Sbjct: 313 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 357
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 422 LGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLV 477
LG F + G+ +T+T TV V + + +E+ ++I +H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 478 RLLGFCDE-GQNRLLVYKFLNNGTLASFL 505
LLG C + G +++ +F G L+++L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 411 RNMMNVTRSVLLGSSV-FVNFTLVGVIQTSTRTTVIVV--KKLDRVFQDGEKEFKNEVV- 466
+ MN S SS+ +F L+ VI + V++V KK DR++ K K E+V
Sbjct: 2 KEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIY--AMKVVKKELVN 59
Query: 467 -------------MIGQTYHKNLVRLLGFCDEGQNRLL-VYKFLNNGTLASFLFENLK-P 511
+ Q + + L C + ++RL V +++N G L + K P
Sbjct: 60 DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP 119
Query: 512 GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQ 571
+ R A +I+ L +LH II+ D+K N+LLD + +++D+G+ K +
Sbjct: 120 EEHARFYSA-EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--R 173
Query: 572 SKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDI 622
GT Y+A PE R +VD ++ GVL+ E+++ R FDI
Sbjct: 174 PGDTTSXFCGTPNYIA-PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+FQ+A+G+ L S + IH D+ +NILL + +I DFGLA+ + + K
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 637
R ++A PE + T DV+SFGVLL EI S S +++ EE+
Sbjct: 254 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 303
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
C R L EG D E + + C +PS RPT ++ + L
Sbjct: 304 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 348
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 422 LGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLV 477
LG F + G+ +T+T TV V + + +E+ ++I +H N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 478 RLLGFCDE-GQNRLLVYKFLNNGTLASFL 505
LLG C + G +++ +F G L+++L
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA 520
FK +M G H LV L + ++ +V L G L L +N+ +
Sbjct: 63 FKELQIMQG-LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK---EETVK 118
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
I ++ L + +IIH D+KP NILLD++ + I+DF +A +L + +
Sbjct: 119 LFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMA 175
Query: 581 GTKGYVASPEWF---RNSTITANVDVYSFGVLLLEIISCRKSFDI 622
GTK Y+A PE F + + + VD +S GV E++ R+ + I
Sbjct: 176 GTKPYMA-PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+FQ+A+G+ L S + IH D+ +NILL + +I DFGLA+ + + K
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 637
R ++A PE + T DV+SFGVLL EI S S +++ EE+
Sbjct: 261 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 310
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
C R L EG D E + + C +PS RPT ++ + L
Sbjct: 311 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 355
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 422 LGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLV 477
LG F + G+ +T+T TV V + + +E+ ++I +H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 478 RLLGFCDE-GQNRLLVYKFLNNGTLASFL 505
LLG C + G +++ +F G L+++L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 444 VIVVKKLD-RVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+I KKL R FQ E+E + + + H N+VRL E LV+ + G L
Sbjct: 61 IINTKKLSARDFQKLEREAR----ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL- 115
Query: 503 SFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ-IIHCDIKPQNILLDDYYNA---QI 558
FE++ A + +L C S I+H ++KP+N+LL ++
Sbjct: 116 ---FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 172
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRK 618
+DFGLA + +N S+A GT GY+ SPE + + VD+++ GV+L ++
Sbjct: 173 ADFGLA--IEVNDSEAW-HGFAGTPGYL-SPEVLKKDPYSKPVDIWACGVILYILLVGYP 228
Query: 619 SF-DIEMGEEYAILTDWAFD 637
F D + YA + A+D
Sbjct: 229 PFWDEDQHRLYAQIKAGAYD 248
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 11/177 (6%)
Query: 455 QDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL-ASFLFENLKPG 512
+ +KE + E+ + H LV L ++ +++Y+F++ G L E+ K
Sbjct: 88 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMS 147
Query: 513 WNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQIS--DFGLAKLLTLN 570
+ Q+ +GL H+H N +H D+KP+NI+ + ++ DFGL L
Sbjct: 148 EDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 204
Query: 571 QSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
QS K GT + A+PE + D++S GVL ++S F E +E
Sbjct: 205 QS---VKVTTGTAEF-AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 257
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + G+VA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMAGFVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+FQ+A+G+ L S + IH D+ +NILL + +I DFGLA+ + + K
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 637
R ++A PE + T DV+SFGVLL EI S S +++ EE+
Sbjct: 256 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 305
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
C R L EG D E + + C +PS RPT ++ + L
Sbjct: 306 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 350
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 422 LGSSVF---VNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLV 477
LG F + G+ +T+T TV V + + +E+ ++I +H N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 478 RLLGFCDE-GQNRLLVYKFLNNGTLASFL 505
LLG C + G +++ +F G L+++L
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK-AIKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 190 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 24/229 (10%)
Query: 411 RNMMNVTRSVLLGSSV-FVNFTLVGVIQTSTRTTVIVV--KKLDRVF--QDGEKEFKN-- 463
+ MN S SS+ +F L+ VI + V++V KK DR++ + +KE N
Sbjct: 34 KEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD 93
Query: 464 --------EVVMIGQTYHKNLVRLLGFCDEGQNRLL-VYKFLNNGTLASFLFENLK-PGW 513
E + Q + + L C + ++RL V +++N G L + K P
Sbjct: 94 EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE 153
Query: 514 NLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK 573
+ R A +I+ L +LH II+ D+K N+LLD + +++D+G+ K +
Sbjct: 154 HARFYSA-EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPG 207
Query: 574 AIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDI 622
GT Y+A PE R +VD ++ GVL+ E+++ R FDI
Sbjct: 208 DTTSTFCGTPNYIA-PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + G+VA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMAGFVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ + EV ++ + H N++ L + + +L+ + + G L FL E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATE 118
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY----YNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH S QI H D+KP+NI+L D +I DFGLA +
Sbjct: 119 FLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 -FKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 20/184 (10%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQ 522
EV ++ + H N+++L ++ + +V + G L + + + + A I Q
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 523 IARGLLHLHVNCSSQIIHCDIKPQNILLDDYY---NAQISDFGLAKLLTLNQSKAIKKAI 579
+ G+ ++H I+H D+KP+NILL+ + +I DFGL+ Q+ +K I
Sbjct: 130 VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST--CFQQNTKMKDRI 184
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGE-EYAILT-----D 633
GT Y+A PE R T DV+S GV+L ++S F G+ EY IL
Sbjct: 185 -GTAYYIA-PEVLRG-TYDEKCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGK 238
Query: 634 WAFD 637
+AFD
Sbjct: 239 YAFD 242
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 191
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 192 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 28/189 (14%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ + E+ ++ H+N++ LL + + TL
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 503 SFLFENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
N+ L + +Q+ RGL ++H S+ IIH D+KP N+ +++ +I
Sbjct: 116 GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRI 172
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFGVLLL 611
DFGLA ++A GYVA+ W+R I N VD++S G ++
Sbjct: 173 LDFGLA-----------RQADEEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 612 EIISCRKSF 620
E++ + F
Sbjct: 221 ELLQGKALF 229
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 101
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 158
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + G+VA+ W+R I N VD++S G
Sbjct: 159 ELKILDFGLA-----------RHTDDEMAGFVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 207 CIMAELLTGRTLF 219
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 136 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 192
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 193 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 20/184 (10%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQ 522
EV ++ + H N+++L ++ + +V + G L + + + + A I Q
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 523 IARGLLHLHVNCSSQIIHCDIKPQNILLDDYY---NAQISDFGLAKLLTLNQSKAIKKAI 579
+ G+ ++H I+H D+KP+NILL+ + +I DFGL+ Q+ +K I
Sbjct: 130 VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRI 184
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGE-EYAILT-----D 633
GT Y+A PE R T DV+S GV+L ++S F G+ EY IL
Sbjct: 185 -GTAYYIA-PEVLRG-TYDEKCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGK 238
Query: 634 WAFD 637
+AFD
Sbjct: 239 YAFD 242
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 12/198 (6%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LGS + L T + ++KK +EV ++ Q H N+++L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
F ++ +N LV + G L + K A I Q+ G +LH I+H
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHR 145
Query: 542 DIKPQNILLDDYYN---AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
D+KP+N+LL+ +I DFGL+ + K GT Y+A PE R
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIA-PEVLRKK-YD 200
Query: 599 ANVDVYSFGVLLLEIISC 616
DV+S GV+L I+ C
Sbjct: 201 EKCDVWSCGVILY-ILLC 217
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 461 FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA 520
F E ++ H LV+L + + ++ +F+ G+L FL + L I
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 521 F--QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
F QIA G+ + IH D++ NIL+ +I+DFGLA++ K
Sbjct: 283 FSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARV-------GAKFP 332
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
I+ T +PE + T DV+SFG+LL+EI++ + +
Sbjct: 333 IKWT-----APEAINFGSFTIKSDVWSFGILLMEIVTYGRI---------------PYPG 372
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
N ++ +E C E+L + + C + P RPT + +L
Sbjct: 373 MSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK-AIKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 139 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 195
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 196 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK-AIKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 188 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 190 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK-AIKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 151 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 208 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 129 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 186 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 129 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 186 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 17/196 (8%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LGS F + LV + + + K DR Q ++ + E+ ++ H N++++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINK-DRS-QVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR----ANIAFQIARGLLHLHVNCSSQ 537
++ N +V + G L + G L A + Q+ L + H S
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQH 144
Query: 538 IIHCDIKPQNILLDD---YYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRN 594
++H D+KP+NIL D + +I DFGLA+L ++ GT Y+A PE F+
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHST---NAAGTALYMA-PEVFKR 200
Query: 595 STITANVDVYSFGVLL 610
+T D++S GV++
Sbjct: 201 D-VTFKCDIWSAGVVM 215
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 188 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 192 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 192 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 133 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 190 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 136 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 192
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 193 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 137 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 193
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 194 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 128 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 184
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 185 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAI 579
+QI RGL ++H S+ ++H D+KP N+LL+ + +I DFGLA++ +
Sbjct: 135 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 192 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ K E + H ++V LL +V++F++ L + + G+
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 519 IAFQIARGLLHLHVNCS-SQIIHCDIKPQNILLDDYYNA---QISDFGLAKLLTLNQSKA 574
+A R +L C + IIH D+KP+N+LL N+ ++ DFG+A + L +S
Sbjct: 131 VASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGL 188
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ GT ++A PE + VDV+ GV+L ++S
Sbjct: 189 VAGGRVGTPHFMA-PEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 34/194 (17%)
Query: 441 RTTVIVVKKLDRVFQDGEKEFKNEVVMIGQ-TYHKNLVRLLG-FCDEGQNRL-----LVY 493
+T + K+ V D E+E K E+ M+ + ++H+N+ G F + + LV
Sbjct: 47 KTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVM 106
Query: 494 KFLNNGTLASFLFEN----LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNIL 549
+F G++ + LK W A I +I RGL HLH ++IH DIK QN+L
Sbjct: 107 EFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLSHLH---QHKVIHRDIKGQNVL 161
Query: 550 LDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN--------- 600
L + ++ DFG+ S + + + ++ +P W I +
Sbjct: 162 LTENAEVKLVDFGV--------SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDF 213
Query: 601 -VDVYSFGVLLLEI 613
D++S G+ +E+
Sbjct: 214 KSDLWSLGITAIEM 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 28/189 (14%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ + E+ ++ H+N++ LL + + TL
Sbjct: 48 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 107
Query: 503 SFLFENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
N+ L + +Q+ RGL ++H S+ IIH D+KP N+ +++ +I
Sbjct: 108 GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRI 164
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFGVLLL 611
DFGLA ++A GYVA+ W+R I N VD++S G ++
Sbjct: 165 LDFGLA-----------RQADEEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVGCIMA 212
Query: 612 EIISCRKSF 620
E++ + F
Sbjct: 213 ELLQGKALF 221
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 444 VIVVKKLD-RVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+I KKL R FQ E+E + + + H N+VRL E LV+ + G L
Sbjct: 38 IINTKKLSARDFQKLEREAR----ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL- 92
Query: 503 SFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ-IIHCDIKPQNILLDDYYNA---QI 558
FE++ A + +L C S I+H ++KP+N+LL ++
Sbjct: 93 ---FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRK 618
+DFGLA + +N S+A GT GY+ SPE + + VD+++ GV+L ++
Sbjct: 150 ADFGLA--IEVNDSEAW-HGFAGTPGYL-SPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 619 SF-DIEMGEEYAILTDWAFD 637
F D + YA + A+D
Sbjct: 206 PFWDEDQHRLYAQIKAGAYD 225
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 12/198 (6%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LGS + L T + ++KK +EV ++ Q H N+++L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
F ++ +N LV + G L + K A I Q+ G +LH I+H
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHR 128
Query: 542 DIKPQNILLDDYYN---AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
D+KP+N+LL+ +I DFGL+ + K GT Y+A PE R
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVG---GKMKERLGTAYYIA-PEVLRKK-YD 183
Query: 599 ANVDVYSFGVLLLEIISC 616
DV+S GV+L I+ C
Sbjct: 184 EKCDVWSCGVILY-ILLC 200
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 444 VIVVKKLD-RVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+I KKL R FQ E+E + + + H N+VRL E LV+ + G L
Sbjct: 38 IINTKKLSARDFQKLEREAR----ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL- 92
Query: 503 SFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ-IIHCDIKPQNILLDDYYNA---QI 558
FE++ A + +L C S I+H ++KP+N+LL ++
Sbjct: 93 ---FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRK 618
+DFGLA + +N S+A GT GY+ SPE + + VD+++ GV+L ++
Sbjct: 150 ADFGLA--IEVNDSEAW-HGFAGTPGYL-SPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 619 SF-DIEMGEEYAILTDWAFD 637
F D + YA + A+D
Sbjct: 206 PFWDEDQHRLYAQIKAGAYD 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 474 KNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF-ENLKPGWNLRANIAFQIARGLLHLHV 532
+N V+ + + + ++ N TL + ENL + + QI L ++H
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH- 133
Query: 533 NCSSQIIHCDIKPQNILLDDYYNAQISDFGLAK-------LLTLN------QSKAIKKAI 579
S IIH D+KP NI +D+ N +I DFGLAK +L L+ S + AI
Sbjct: 134 --SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
GT YVA+ +D+YS G++ E+I
Sbjct: 192 -GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A I +I +GL +LH S + IH DIK N+LL ++ +++DFG+A LT Q K +
Sbjct: 127 ATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--R 181
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEI 613
GT ++A PE + S + D++S G+ +E+
Sbjct: 182 NTFVGTPFWMA-PEVIKQSAYDSKADIWSLGITAIEL 217
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A I +I +GL +LH S + IH DIK N+LL ++ +++DFG+A LT Q K +
Sbjct: 107 ATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--R 161
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEI 613
GT ++A PE + S + D++S G+ +E+
Sbjct: 162 NTFVGTPFWMA-PEVIKQSAYDSKADIWSLGITAIEL 197
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 113/252 (44%), Gaps = 31/252 (12%)
Query: 450 LDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFE-N 508
++R +D K FK EV+ QT H+N+V +G C + ++ TL S + +
Sbjct: 65 IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK 124
Query: 509 LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLT 568
+ N IA +I +G+ +LH + I+H D+K +N+ D+ I+DFGL +
Sbjct: 125 IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDN-GKVVITDFGLFSISG 180
Query: 569 LNQSKAIKKAIRGTKGYVA--SPEWFRNST---------ITANVDVYSFGVLLLEIISCR 617
+ Q+ + +R G++ +PE R + + + DV++ G + E+ +
Sbjct: 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE 240
Query: 618 KSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPS 677
F + E AI+ W L + G + ++DI ++ W +++
Sbjct: 241 WPFKTQPAE--AII--WQMGTGMKPNLSQIGMG--KEISDI-------LLFCWAFEQEE- 286
Query: 678 LRPTMRKVSQML 689
RPT K+ ML
Sbjct: 287 -RPTFTKLMDML 297
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 444 VIVVKKLD-RVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+I KKL R FQ E+E + + + H N+VRL E LV+ + G L
Sbjct: 37 IINTKKLSARDFQKLEREAR----ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL- 91
Query: 503 SFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ-IIHCDIKPQNILLDDYYNA---QI 558
FE++ A + +L C S I+H ++KP+N+LL ++
Sbjct: 92 ---FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 148
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRK 618
+DFGLA + +N S+A GT GY+ SPE + + VD+++ GV+L ++
Sbjct: 149 ADFGLA--IEVNDSEAW-HGFAGTPGYL-SPEVLKKDPYSKPVDIWACGVILYILLVGYP 204
Query: 619 SF-DIEMGEEYAILTDWAFD 637
F D + YA + A+D
Sbjct: 205 PFWDEDQHRLYAQIKAGAYD 224
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A I +I +GL +LH S + IH DIK N+LL ++ +++DFG+A LT Q K +
Sbjct: 122 ATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--R 176
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEI 613
GT ++A PE + S + D++S G+ +E+
Sbjct: 177 NXFVGTPFWMA-PEVIKQSAYDSKADIWSLGITAIEL 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
A I +I +GL +LH S + IH DIK N+LL ++ +++DFG+A LT Q K +
Sbjct: 107 ATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--R 161
Query: 577 KAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEI 613
GT ++A PE + S + D++S G+ +E+
Sbjct: 162 NXFVGTPFWMA-PEVIKQSAYDSKADIWSLGITAIEL 197
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
LG F L +T + + + + D + E+ + H ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ ++V ++ G L ++ E + + QI + + H +I+H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH---RHKIVHR 132
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA-- 599
D+KP+N+LLDD N +I+DFGL+ ++T K G+ Y A+PE N + A
Sbjct: 133 DLKPENLLLDDNLNVKIADFGLSNIMT---DGNFLKTSCGSPNY-AAPEVI-NGKLYAGP 187
Query: 600 NVDVYSFGVLLLEIISCRKSFDIE 623
VDV+S G++L ++ R FD E
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 458 EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA 517
E + + E+ + +H N++RL + + + L+ ++ G L L ++ A
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA 126
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
I ++A L++ H ++IH DIKP+N+LL +I+DFG +++ +K
Sbjct: 127 TIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRK 179
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
+ GT Y+ PE VD++ GVL E++ F+
Sbjct: 180 TMCGTLDYLP-PEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDE-GQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANIA 520
E+ ++ + H N+V+L+ D+ ++ L +V++ +N G + LKP +A
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLSEDQARFY 142
Query: 521 FQ-IARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
FQ + +G+ +LH +IIH DIKP N+L+ + + +I+DFG++ S A+
Sbjct: 143 FQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSN--EFKGSDALLSNT 197
Query: 580 RGTKGYVASPEWFRNSTITAN--VDVYSFGVLL 610
GT ++A I + +DV++ GV L
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK-AIKKAI 579
+QI RGL ++H S+ ++H D+KP N+L++ + +I DFGLA++
Sbjct: 151 YQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 580 RGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSF 620
T+ Y A PE NS T ++D++S G +L E++S R F
Sbjct: 208 VATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 13/174 (7%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
+E + EV ++ + H N++ L + + +L+ + ++ G L FL E +
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD--YYNAQIS--DFGLA-KLLTLNQSK 573
QI G+ +LH S +I H D+KP+NI+L D N +I DFG+A K+ N+
Sbjct: 120 FLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF- 175
Query: 574 AIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
K I GT +VA PE + D++S GV+ ++S F E +E
Sbjct: 176 ---KNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 225
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF 521
+ E+ ++ Q + + G +G ++ ++L G+ L + + A +
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI-ATMLK 127
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
+I +GL +LH S + IH DIK N+LL + + +++DFG+A LT Q K + G
Sbjct: 128 EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNTFVG 182
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEI 613
T ++A PE + S + D++S G+ +E+
Sbjct: 183 TPFWMA-PEVIQQSAYDSKADIWSLGITAIEL 213
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 429 NFTLVGVIQTSTRTTVIVV--KKLDRVFQDGEKEFKNEVV--------------MIGQTY 472
+F L+ VI + V++V KK DR++ K K E+V + Q
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIY--AMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 473 HKNLVRLLGFCDEGQNRLL-VYKFLNNGTLASFLFENLK-PGWNLRANIAFQIARGLLHL 530
+ + L C + ++RL V +++N G L + K P + R A +I+ L +L
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYL 126
Query: 531 HVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPE 590
H II+ D+K N+LLD + +++D+G+ K + GT Y+A PE
Sbjct: 127 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSXFCGTPNYIA-PE 180
Query: 591 WFRNSTITANVDVYSFGVLLLEIISCRKSFDI 622
R +VD ++ GVL+ E+++ R FDI
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 13/174 (7%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
+E + EV ++ + H N++ L + + +L+ + ++ G L FL E +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 112
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD--YYNAQIS--DFGLA-KLLTLNQSK 573
QI G+ +LH S +I H D+KP+NI+L D N +I DFG+A K+ N+
Sbjct: 113 FLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF- 168
Query: 574 AIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
K I GT +VA PE + D++S GV+ ++S F E +E
Sbjct: 169 ---KNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 9/210 (4%)
Query: 420 VLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKN-EVVMIGQTYHKNLVR 478
++LG F L T + ++KK D V QD + E E ++ +
Sbjct: 25 MVLGKGSFGKVMLADRKGTEELYAIKILKK-DVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 479 LLGFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
L C + +RL V +++N G L + + K A +I+ GL LH
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH---KRG 140
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
II+ D+K N++LD + +I+DFG+ K ++ + GT Y+A PE
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GVTTREFCGTPDYIA-PEIIAYQPY 197
Query: 598 TANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+VD +++GVLL E+++ + FD E +E
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHV 532
H N+++L + LV+ + G L +L E + L +I R LL V
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLE--V 136
Query: 533 NCSSQ---IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
C+ I+H D+KP+NILLDD N +++DFG + L + +++ GT Y+A P
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRSVCGTPSYLA-P 192
Query: 590 EWFRNST------ITANVDVYSFGVLLLEIISCRKSF 620
E S VD++S GV++ +++ F
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 13/174 (7%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
+E + EV ++ + H N++ L + + +L+ + ++ G L FL E +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 133
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD--YYNAQIS--DFGLA-KLLTLNQSK 573
QI G+ +LH S +I H D+KP+NI+L D N +I DFG+A K+ N+
Sbjct: 134 FLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF- 189
Query: 574 AIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
K I GT +VA PE + D++S GV+ ++S F E +E
Sbjct: 190 ---KNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
+E + EV ++ Q H N++ L + + +L+ + ++ G L FL + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD----YYNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH + +I H D+KP+NI+L D + ++ DFGLA + +
Sbjct: 120 FIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGV 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 EFKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 429 NFTLVGVIQTSTRTTVIVV--KKLDRVFQDGEKEFKNEVV--------------MIGQTY 472
+F L+ VI + V++V KK DR++ K K E+V + Q
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIY--AMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 473 HKNLVRLLGFCDEGQNRLL-VYKFLNNGTLASFLFENLK-PGWNLRANIAFQIARGLLHL 530
+ + L C + ++RL V +++N G L + K P + R A +I+ L +L
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYL 122
Query: 531 HVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPE 590
H II+ D+K N+LLD + +++D+G+ K + GT Y+A PE
Sbjct: 123 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSXFCGTPNYIA-PE 176
Query: 591 WFRNSTITANVDVYSFGVLLLEIISCRKSFDI 622
R +VD ++ GVL+ E+++ R FDI
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 19/157 (12%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHV 532
H N+++L + LV+ + G L +L E + L +I R LL V
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLE--V 123
Query: 533 NCSSQ---IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
C+ I+H D+KP+NILLDD N +++DFG + L+ + +++ + GT Y+A P
Sbjct: 124 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLRE-VCGTPSYLA-P 179
Query: 590 EWFRNST------ITANVDVYSFGVLLLEIISCRKSF 620
E S VD++S GV++ +++ F
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 19/157 (12%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHV 532
H N+++L + LV+ + G L +L E + L +I R LL V
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLE--V 136
Query: 533 NCSSQ---IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
C+ I+H D+KP+NILLDD N +++DFG + L+ + +++ + GT Y+A P
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLRE-VCGTPSYLA-P 192
Query: 590 EWFRNST------ITANVDVYSFGVLLLEIISCRKSF 620
E S VD++S GV++ +++ F
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + G VA+ W+R I N VD++S G
Sbjct: 163 ELKILDFGLA-----------RHTDDEMTGXVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I D GLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDAGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I FGLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILGFGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 70 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 125
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 182
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DFGLA + G VA+ W+R I N VD++S G
Sbjct: 183 ELKILDFGLA-----------RHTDDEMXGXVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 230
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 231 CIMAELLTGRTLF 243
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 22/172 (12%)
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+FQ+ARG+ L S + IH D+ +NILL + +I DFGLA+ + N K
Sbjct: 205 SFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 637
R ++A PE + + DV+S+GVLL EI S S ++M E++
Sbjct: 262 RLPLKWMA-PESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF--------- 311
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVSQML 689
C R L EG M ++ + + C DP RP ++ + L
Sbjct: 312 CSR------LREG-MRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
+E + EV ++ Q H N++ L + + +L+ + ++ G L FL + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD----YYNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH + +I H D+KP+NI+L D + ++ DFGLA + +
Sbjct: 120 FIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGV 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 EFKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
+E + EV ++ Q H N++ L + + +L+ + ++ G L FL + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD----YYNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH + +I H D+KP+NI+L D + ++ DFGLA + +
Sbjct: 120 FIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGV 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 EFKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 29/242 (11%)
Query: 455 QDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWN 514
Q E E+ + Q +H N+V LV K L+ G++ + + G +
Sbjct: 49 QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 108
Query: 515 LR--------ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKL 566
A I ++ GL +LH N IH D+K NILL + + QI+DFG++
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAF 165
Query: 567 LTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA------NVDVYSFGVLLLEIISCRKSF 620
L + +R T +V +P W + D++SFG+ +E+ + +
Sbjct: 166 LATG-GDITRNKVRKT--FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
Query: 621 DIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI-KCVEKLVMVSIWCIQEDPSLR 679
+Y + + + D E + K K++ + C+Q+DP R
Sbjct: 223 -----HKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL---CLQKDPEKR 274
Query: 680 PT 681
PT
Sbjct: 275 PT 276
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I D GLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDRGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
+E + EV ++ Q H N++ L + + +L+ + ++ G L FL + +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD----YYNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH + +I H D+KP+NI+L D + ++ DFGLA + +
Sbjct: 120 FIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGV 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 EFKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I DF LA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDFYLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
+E + EV ++ Q H N++ L + + +L+ + ++ G L FL + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD----YYNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH + +I H D+KP+NI+L D + ++ DFGLA + +
Sbjct: 120 FIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGV 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 EFKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
+E + EV ++ Q H N++ L + + +L+ + ++ G L FL + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 519 IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDD----YYNAQISDFGLAKLLTLNQSKA 574
QI G+ +LH + +I H D+KP+NI+L D + ++ DFGLA + +
Sbjct: 120 FIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGV 173
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
K I GT +VA PE + D++S GV+ ++S F
Sbjct: 174 EFKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 29/237 (12%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR--- 516
E E+ + Q +H N+V LV K L+ G++ + + G +
Sbjct: 59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 118
Query: 517 -----ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQ 571
A I ++ GL +LH N IH D+K NILL + + QI+DFG++ L
Sbjct: 119 DESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATG- 174
Query: 572 SKAIKKAIRGTKGYVASPEWFRNSTITA------NVDVYSFGVLLLEIISCRKSFDIEMG 625
+ +R T +V +P W + D++SFG+ +E+ + +
Sbjct: 175 GDITRNKVRKT--FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY----- 227
Query: 626 EEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI-KCVEKLVMVSIWCIQEDPSLRPT 681
+Y + + + D E + K K++ + C+Q+DP RPT
Sbjct: 228 HKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL---CLQKDPEKRPT 281
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 439 STRTTVIVVK--KLDRVFQ-DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKF 495
S +T + VK K D + Q + +F EV + H+NL+RL G ++ V +
Sbjct: 43 SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTEL 101
Query: 496 LNNGTL--------ASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQN 547
G+L FL L + A Q+A G+ +L S + IH D+ +N
Sbjct: 102 APLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARN 151
Query: 548 ILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFG 607
+LL +I DFGL + L N + + R +PE + T + D + FG
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 608 VLLLEIIS 615
V L E+ +
Sbjct: 212 VTLWEMFT 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 25/198 (12%)
Query: 435 VIQTSTRTTVIVVKKLDRVFQDGEKE-----FKNEVVMIGQTYHKNLVRLLGFCDEGQNR 489
V + R T +V L RV D + E E+ ++ + HKN+VRL +
Sbjct: 18 VFKAKNRETHEIVA-LKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL 76
Query: 490 LLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNIL 549
LV++F + F N + + FQ+ +GL H S ++H D+KPQN+L
Sbjct: 77 TLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLL 133
Query: 550 LDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-------TANVD 602
++ +++DFGLA +A +R V + W+R + + ++D
Sbjct: 134 INRNGELKLADFGLA--------RAFGIPVRCYSAEVVT-LWYRPPDVLFGAKLYSTSID 184
Query: 603 VYSFGVLLLEIISCRKSF 620
++S G + E+ + +
Sbjct: 185 MWSAGCIFAELANAARPL 202
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 494 KFLNNGTLASFLFENLKPGWNLRANIAF----QIARGLLHLHVNCSSQIIHCDIKPQNIL 549
+F + GTL ++ + G L +A QI +G+ ++H S ++I+ D+KP NI
Sbjct: 100 EFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIF 154
Query: 550 LDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVL 609
L D +I DFGL L N K + +GT Y+ SPE + VD+Y+ G++
Sbjct: 155 LVDTKQVKIGDFGLVTSLK-NDGKRXRS--KGTLRYM-SPEQISSQDYGKEVDLYALGLI 210
Query: 610 LLEIIS-CRKSFD 621
L E++ C +F+
Sbjct: 211 LAELLHVCDTAFE 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 36/193 (18%)
Query: 445 IVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ VKKL R FQ K E+ ++ H+N++ LL ++ + N+ L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLV 105
Query: 503 SFL----FENLKPGWNLRAN----IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ L N+ L + + +QI RGL ++H S+ IIH D+KP N+ +++
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 162
Query: 555 NAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFG 607
+I D GLA + GYVA+ W+R I N VD++S G
Sbjct: 163 ELKILDGGLA-----------RHTDDEMTGYVAT-RWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 608 VLLLEIISCRKSF 620
++ E+++ R F
Sbjct: 211 CIMAELLTGRTLF 223
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 103/243 (42%), Gaps = 47/243 (19%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKF-LNNGTLASFLFENLKPGWNLRANIAF-------QIA 524
H N++R +C E +R L L N L + NL+ + QIA
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 525 RGLLHLHVNCSSQIIHCDIKPQNILL--------DDYYNAQ-----ISDFGLAKLLTLNQ 571
G+ HLH S +IIH D+KPQNIL+ D A+ ISDFGL K L Q
Sbjct: 126 SGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 572 S--KAIKKAIRGTKGYVASPEWFRNST-------ITANVDVYSFGVLLLEIISCRKSFDI 622
+ GT G+ A PE S +T ++D++S G + I+S K
Sbjct: 183 XXFRXNLNNPSGTSGWRA-PELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH--- 238
Query: 623 EMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTM 682
G++Y+ ++ + LD +M+ ++D + + + I DP RPT
Sbjct: 239 PFGDKYSRESNIIRGIF---SLD-----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 683 RKV 685
KV
Sbjct: 291 MKV 293
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 444 VIVVKKLDRVFQDGEKEFKNEVVMIGQTYHK-NLVRLLGFC----DEGQNRLLVYKFLNN 498
+I+ +KL + + + +N+++ Q H+ N ++GF +G+ + + + ++
Sbjct: 42 LIMARKL--IHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDG 98
Query: 499 GTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQI 558
G+L L E + + ++ + RGL +L QI+H D+KP NIL++ ++
Sbjct: 99 GSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKL 156
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
DFG++ L ++ + GT+ Y+A PE + + + D++S G+ L+E+ R
Sbjct: 157 CDFGVSGQLI----DSMANSFVGTRSYMA-PERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 21/228 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L++ + + G L ++ E+ G
Sbjct: 66 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 124
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 125 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A E + T DV+S+GV + E+++ +D
Sbjct: 182 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT---------------FGSKPYD 225
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
++ ++E C + M+ + C D RP R++
Sbjct: 226 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 273
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + +VY L + ++
Sbjct: 50 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYR 107
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 164
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 165 CDFGSAKQLVRGEPNVSXICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 618 KSFDIEMG 625
F + G
Sbjct: 221 PIFPGDSG 228
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 439 STRTTVIVVK--KLDRVFQ-DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKF 495
S +T + VK K D + Q + +F EV + H+NL+RL G ++ V +
Sbjct: 33 SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTEL 91
Query: 496 LNNGTL--------ASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQN 547
G+L FL L + A Q+A G+ +L S + IH D+ +N
Sbjct: 92 APLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 548 ILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFG 607
+LL +I DFGL + L N + + R +PE + T + D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 608 VLLLEIIS 615
V L E+ +
Sbjct: 202 VTLWEMFT 209
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 33/191 (17%)
Query: 445 IVVKKLDRVFQDG--EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ +KKL R FQ K E++++ H+N++ LL + Y F +
Sbjct: 52 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY---LVM 108
Query: 503 SFLFENLKPGWNLRAN------IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
F+ +L+ L+ + + +Q+ +GL ++H S+ ++H D+KP N+ +++
Sbjct: 109 PFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCEL 165
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT-------ANVDVYSFGVL 609
+I DFGLA + A GYV + W+R + VD++S G +
Sbjct: 166 KILDFGLA-----------RHADAEMTGYVVT-RWYRAPEVILSWMHYNQTVDIWSVGCI 213
Query: 610 LLEIISCRKSF 620
+ E+++ + F
Sbjct: 214 MAEMLTGKTLF 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 21/228 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L++ + + G L ++ E+ G
Sbjct: 63 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLL 121
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 122 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A E + T DV+S+GV + E+++ +D
Sbjct: 179 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMTFGSK---------------PYD 222
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
++ ++E C + M+ + C D RP R++
Sbjct: 223 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 270
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENL-KPGWNLRA 517
KE +E ++ + ++ RLLG C +L++ + + G L ++ E+ G
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 128 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 185 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L++ + + G L ++ E+ G
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 124 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 181 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L++ + + G L ++ E+ G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 121 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 178 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 439 STRTTVIVVK--KLDRVFQ-DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKF 495
S +T + VK K D + Q + +F EV + H+NL+RL G ++ V +
Sbjct: 37 SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTEL 95
Query: 496 LNNGTL--------ASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQN 547
G+L FL L + A Q+A G+ +L S + IH D+ +N
Sbjct: 96 APLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARN 145
Query: 548 ILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFG 607
+LL +I DFGL + L N + + R +PE + T + D + FG
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 608 VLLLEIIS 615
V L E+ +
Sbjct: 206 VTLWEMFT 213
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 8/201 (3%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLG 481
+G+ F L I T + ++ K K E+ + H+++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDK--NTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 482 FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHC 541
+ +V ++ G L ++ + + QI + ++H S H
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH---SQGYAHR 132
Query: 542 DIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFR-NSTITAN 600
D+KP+N+L D+Y+ ++ DFGL N+ ++ G+ Y A+PE + S + +
Sbjct: 133 DLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAY-AAPELIQGKSYLGSE 190
Query: 601 VDVYSFGVLLLEIISCRKSFD 621
DV+S G+LL ++ FD
Sbjct: 191 ADVWSMGILLYVLMCGFLPFD 211
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L++ + + G L ++ E+ G
Sbjct: 63 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 121
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 122 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 179 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 21/228 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 87 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 145
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 146 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A E + T DV+S+GV + E+++ +D
Sbjct: 203 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT---------------FGSKPYD 246
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
++ ++E C + M+ + C D RP R++
Sbjct: 247 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 294
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 420 VLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKN-EVVMIGQTYHKNLVR 478
++LG F L T V ++KK D V QD + E E ++ +
Sbjct: 347 MVLGKGSFGKVMLSERKGTDELYAVKILKK-DVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 479 LLGFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
L C + +RL V +++N G L + + + A +IA GL L S
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKG 462
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
II+ D+K N++LD + +I+DFG+ K + K GT Y+A PE
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIA-PEIIAYQPY 519
Query: 598 TANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+VD ++FGVLL E+++ + F+ E +E
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
A +I GL H+H + +++ D+KP NILLD++ + +ISD GLA + SK A
Sbjct: 297 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHAS 349
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
GT GY+A + ++ D +S G +L +++ F
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
A +I GL H+H + +++ D+KP NILLD++ + +ISD GLA + SK A
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHAS 350
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
GT GY+A + ++ D +S G +L +++ F
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L++ + + G L ++ E+ G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 123 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 180 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 439 STRTTVIVVK--KLDRVFQ-DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKF 495
S +T + VK K D + Q + +F EV + H+NL+RL G ++ V +
Sbjct: 43 SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTEL 101
Query: 496 LNNGTL--------ASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQN 547
G+L FL L + A Q+A G+ +L S + IH D+ +N
Sbjct: 102 APLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARN 151
Query: 548 ILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFG 607
+LL +I DFGL + L N + + R +PE + T + D + FG
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 211
Query: 608 VLLLEIIS 615
V L E+ +
Sbjct: 212 VTLWEMFT 219
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
+ K E+ + H ++++L + +V ++++ G L ++ ++ + +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
QI + + H ++H D+KP+N+LLD + NA+I+DFGL+ +++ + +
Sbjct: 117 FQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRTS 170
Query: 580 RGTKGYVASPEWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIE 623
G+ Y A+PE VD++S GV+L ++ FD E
Sbjct: 171 CGSPNY-AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 514 NLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK 573
++ IA I + L HLH S +IH D+KP N+L++ ++ DFG++ L + +K
Sbjct: 153 DILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK 210
Query: 574 AIKKAIRGTKGYVA----SPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
I G K Y+A +PE + D++S G+ ++E+ R +D
Sbjct: 211 TIDA---GCKPYMAPERINPE-LNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 21/228 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 68 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 126
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 127 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A E + T DV+S+GV + E+++ +D
Sbjct: 184 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT---------------FGSKPYD 227
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
++ ++E C + M+ + C D RP R++
Sbjct: 228 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 275
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
A +I GL H+H + +++ D+KP NILLD++ + +ISD GLA + SK A
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHAS 350
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
GT GY+A + ++ D +S G +L +++ F
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
A +I GL H+H + +++ D+KP NILLD++ + +ISD GLA + SK A
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHAS 350
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
GT GY+A + ++ D +S G +L +++ F
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 21/228 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 123 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A E + T DV+S+GV + E+++ +D
Sbjct: 180 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT---------------FGSKPYD 223
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
++ ++E C + M+ + C D RP R++
Sbjct: 224 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 21/228 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLL 120
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 121 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A E + T DV+S+GV + E+++ +D
Sbjct: 178 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMTFGSK---------------PYD 221
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
++ ++E C + M+ + C D RP R++
Sbjct: 222 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 84 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 141
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 142 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 198
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 199 CDFGSAKQLVRGEPNVSXICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
Query: 618 KSFDIEMG 625
F + G
Sbjct: 255 PIFPGDSG 262
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 124 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 181 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENL-KPGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 121 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 178 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 21/228 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 128 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A E + T DV+S+GV + E+++ +D
Sbjct: 185 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT---------------FGSKPYD 228
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
++ ++E C + M+ + C D RP R++
Sbjct: 229 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 121 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 178 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENL-KPGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 124 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 181 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 124 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 181 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 56 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 114
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 115 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 172 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 21/228 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 128 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A E + T DV+S+GV + E+++ +D
Sbjct: 185 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT---------------FGSKPYD 228
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
++ ++E C + M+ + C D RP R++
Sbjct: 229 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 439 STRTTVIVVK--KLDRVFQ-DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKF 495
S +T + VK K D + Q + +F EV + H+NL+RL G ++ V +
Sbjct: 33 SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTEL 91
Query: 496 LNNGTL--------ASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQN 547
G+L FL L + A Q+A G+ +L S + IH D+ +N
Sbjct: 92 APLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 548 ILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFG 607
+LL +I DFGL + L N + + R +PE + T + D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 608 VLLLEIIS 615
V L E+ +
Sbjct: 202 VTLWEMFT 209
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
+ K E+ + H ++++L + +V ++++ G L ++ ++ + +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
QI + + H ++H D+KP+N+LLD + NA+I+DFGL+ +++ + ++ +
Sbjct: 117 FQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSC 171
Query: 580 RGTKGYVASPEWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIE 623
G+ Y A+PE VD++S GV+L ++ FD E
Sbjct: 172 -GSPNY-AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 439 STRTTVIVVK--KLDRVFQ-DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKF 495
S +T + VK K D + Q + +F EV + H+NL+RL G ++ V +
Sbjct: 37 SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTEL 95
Query: 496 LNNGTL--------ASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQN 547
G+L FL L + A Q+A G+ +L S + IH D+ +N
Sbjct: 96 APLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARN 145
Query: 548 ILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFG 607
+LL +I DFGL + L N + + R +PE + T + D + FG
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 205
Query: 608 VLLLEIIS 615
V L E+ +
Sbjct: 206 VTLWEMFT 213
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENL-KPGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 121 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 178 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 514 NLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK 573
++ IA I + L HLH S +IH D+KP N+L++ ++ DFG++ L + +K
Sbjct: 109 DILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166
Query: 574 AIKKAIRGTKGYVA----SPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
I G K Y+A +PE + D++S G+ ++E+ R +D
Sbjct: 167 DIDA---GCKPYMAPERINPE-LNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQ 522
E+ M+ Q H NLV LL + LV+++ ++ L +L +I +Q
Sbjct: 51 REIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ 110
Query: 523 I--ARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
A H H NC IH D+KP+NIL+ + ++ DFG A+LLT S +
Sbjct: 111 TLQAVNFCHKH-NC----IHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEV- 163
Query: 581 GTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIIS 615
T+ Y SPE T VDV++ G + E++S
Sbjct: 164 ATRWY-RSPELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 72 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 130
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 131 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 187
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 188 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 439 STRTTVIVVK--KLDRVFQ-DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKF 495
S +T + VK K D + Q + +F EV + H+NL+RL G ++ V +
Sbjct: 33 SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTEL 91
Query: 496 LNNGTL--------ASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQN 547
G+L FL L + A Q+A G+ +L S + IH D+ +N
Sbjct: 92 APLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 548 ILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFG 607
+LL +I DFGL + L N + + R +PE + T + D + FG
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 201
Query: 608 VLLLEIIS 615
V L E+ +
Sbjct: 202 VTLWEMFT 209
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 88 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 145
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 146 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 202
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 203 CDFGSAKQLVRGEPNVSYICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
Query: 618 KSFDIEMG 625
F + G
Sbjct: 259 PIFPGDSG 266
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 96 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 154
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 155 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 211
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 212 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 129 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 186
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 187 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 243
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 244 CDFGSAKQLVRGEPNVSYICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
Query: 618 KSFDIEMG 625
F + G
Sbjct: 300 PIFPGDSG 307
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 490 LLVYKFLNNGTLASFL--FEN---LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIK 544
LL ++ G L +L FEN LK G +R ++ I+ L +LH N +IIH D+K
Sbjct: 94 LLAMEYCEGGDLRKYLNQFENCCGLKEG-PIRTLLS-DISSALRYLHEN---RIIHRDLK 148
Query: 545 PQNILLD---DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
P+NI+L +I D G AK L+Q + + + GT Y+A PE T V
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFV-GTLQYLA-PELLEQKKYTVTV 204
Query: 602 DVYSFGVLLLEIISCRKSF 620
D +SFG L E I+ + F
Sbjct: 205 DYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 490 LLVYKFLNNGTLASFL--FEN---LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIK 544
LL ++ G L +L FEN LK G +R ++ I+ L +LH N +IIH D+K
Sbjct: 95 LLAMEYCEGGDLRKYLNQFENCCGLKEG-PIRTLLS-DISSALRYLHEN---RIIHRDLK 149
Query: 545 PQNILLD---DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
P+NI+L +I D G AK L+Q + + + GT Y+A PE T V
Sbjct: 150 PENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFV-GTLQYLA-PELLEQKKYTVTV 205
Query: 602 DVYSFGVLLLEIISCRKSF 620
D +SFG L E I+ + F
Sbjct: 206 DYWSFGTLAFECITGFRPF 224
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 86 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 143
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 144 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 200
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 201 CDFGSAKQLVRGEPNVSYICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
Query: 618 KSFDIEMG 625
F + G
Sbjct: 257 PIFPGDSG 264
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 447 VKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF 506
VK +D+ +D +E + +++ H N++ L D+G+ +V + + G L +
Sbjct: 52 VKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL 108
Query: 507 ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNIL-LDDYYNAQ---ISDFG 562
+ + F I + + +LH + ++H D+KP NIL +D+ N + I DFG
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFG 165
Query: 563 LAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
AK L + T +VA PE A D++S GVLL +++ F
Sbjct: 166 FAKQLRAENGLLMTPCY--TANFVA-PEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 84 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 141
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 142 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 198
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 199 CDFGSAKQLVRGEPNVSYICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
Query: 618 KSFDIEMG 625
F + G
Sbjct: 255 PIFPGDSG 262
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 446 VVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL 505
VK +D+ +D +E + +++ H N++ L D+G++ LV + + G L +
Sbjct: 56 AVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI 112
Query: 506 FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNIL-LDDYYNAQ---ISDF 561
+ + I + + +LH S ++H D+KP NIL +D+ N + I DF
Sbjct: 113 LRQKFFSEREASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 562 GLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
G AK L + T +VA PE + D++S G+LL +++ F
Sbjct: 170 GFAKQLRAENGLLMTPCY--TANFVA-PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 62 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 119
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 120 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 176
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 177 CDFGSAKQLVRGEPNVSXICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
Query: 618 KSFDIEMG 625
F + G
Sbjct: 233 PIFPGDSG 240
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 78 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 135
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 136 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 192
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 193 CDFGSAKQLVRGEPNVSYICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
Query: 618 KSFDIEMG 625
F + G
Sbjct: 249 PIFPGDSG 256
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 420 VLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKN-EVVMIGQTYHKNLVR 478
++LG F L T V ++KK D V QD + E E ++ +
Sbjct: 26 MVLGKGSFGKVMLSERKGTDELYAVKILKK-DVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 479 LLGFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
L C + +RL V +++N G L + + + A +IA GL L S
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKG 141
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
II+ D+K N++LD + +I+DFG+ K + K GT Y+A PE
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIA-PEIIAYQPY 198
Query: 598 TANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+VD ++FGVLL E+++ + F+ E +E
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 62 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 119
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 120 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 176
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 177 CDFGSAKQLVRGEPNVSXICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
Query: 618 KSFDIEMG 625
F + G
Sbjct: 233 PIFPGDSG 240
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 54 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 111
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 112 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 168
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 169 CDFGSAKQLVRGEPNVSXICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
Query: 618 KSFDIEMG 625
F + G
Sbjct: 225 PIFPGDSG 232
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 431 TLVGVIQTSTRTTVIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNR 489
T+ + T T V + DR E++ FK E + H N+VR F D ++
Sbjct: 41 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR---FYDSWEST 97
Query: 490 L-------LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCD 542
+ LV + +GTL ++L + + QI +GL LH + IIH D
Sbjct: 98 VKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTR-TPPIIHRD 156
Query: 543 IKPQNILLDDYYNA-QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANV 601
+K NI + + +I D GLA L + + KA+ GT + A PE + +V
Sbjct: 157 LKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXA-PEXYEEK-YDESV 210
Query: 602 DVYSFGVLLLE 612
DVY+FG LE
Sbjct: 211 DVYAFGXCXLE 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 33/191 (17%)
Query: 445 IVVKKLDRVFQDG--EKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ +KKL R FQ K E++++ H+N++ LL + Y F +
Sbjct: 70 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY---LVM 126
Query: 503 SFLFENLKPGWNLRAN------IAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA 556
F+ +L+ + + + +Q+ +GL ++H S+ ++H D+KP N+ +++
Sbjct: 127 PFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCEL 183
Query: 557 QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT-------ANVDVYSFGVL 609
+I DFGLA + A GYV + W+R + VD++S G +
Sbjct: 184 KILDFGLA-----------RHADAEMTGYVVT-RWYRAPEVILSWMHYNQTVDIWSVGCI 231
Query: 610 LLEIISCRKSF 620
+ E+++ + F
Sbjct: 232 MAEMLTGKTLF 242
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 55 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 112
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 113 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 169
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 170 CDFGSAKQLVRGEPNVSYICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
Query: 618 KSFDIEMG 625
F + G
Sbjct: 226 PIFPGDSG 233
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 69 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 126
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 127 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 183
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 184 CDFGSAKQLVRGEPNVSXICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
Query: 618 KSFDIEMG 625
F + G
Sbjct: 240 PIFPGDSG 247
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 58 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 115
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 116 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 172
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 173 CDFGSAKQLVRGEPNVSXICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
Query: 618 KSFDIEMG 625
F + G
Sbjct: 229 PIFPGDSG 236
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 446 VVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL 505
VK +D+ +D +E + +++ H N++ L D+G++ LV + + G L +
Sbjct: 56 AVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI 112
Query: 506 FENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNIL-LDDYYNAQ---ISDF 561
+ + I + + +LH S ++H D+KP NIL +D+ N + I DF
Sbjct: 113 LRQKFFSEREASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 562 GLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
G AK L + T +VA PE + D++S G+LL +++ F
Sbjct: 170 GFAKQLRAENGLLMTPCY--TANFVA-PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 59 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 117
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA G+ +L +++H D+ +N+L+ + +I+DFGLAKLL + + +
Sbjct: 118 NWCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 175 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 51 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 108
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 109 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 165
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 166 CDFGSAKQLVRGEPNVSXICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
Query: 618 KSFDIEMG 625
F + G
Sbjct: 222 PIFPGDSG 229
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 50 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 107
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 164
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 165 CDFGSAKQLVRGEPNVSXICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 618 KSFDIEMG 625
F + G
Sbjct: 221 PIFPGDSG 228
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 17/180 (9%)
Query: 449 KLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNR---LLVYKFLNNGTLASFL 505
K R QD E +E+ ++ K+ R++ + +N +L+ ++ G + S
Sbjct: 63 KKRRRGQDCRAEILHEIAVLELA--KSCPRVINLHEVYENTSEIILILEYAAGGEIFSLC 120
Query: 506 FENLKP--GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY---NAQISD 560
L N + QI G+ +LH N I+H D+KPQNILL Y + +I D
Sbjct: 121 LPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVD 177
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
FG+++ + + +++ I GT Y+A PE IT D+++ G++ +++ F
Sbjct: 178 FGMSR--KIGHACELRE-IMGTPEYLA-PEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRLLGFC-------DEGQNRLLVYKFLNNGTL 501
+ +V QD K FKN E+ ++ H N+V L F DE L++
Sbjct: 69 IKKVLQD--KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYR 126
Query: 502 ASFLFENLK---PGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA-Q 557
AS + LK P ++ + +Q+ R L ++H S I H DIKPQN+LLD +
Sbjct: 127 ASRHYAKLKQTMPMLLIKLYM-YQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLK 182
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEW-FRNSTITANVDVYSFGVLLLEIISC 616
+ DFG AK+L + R Y +PE F + T N+D++S G ++ E++
Sbjct: 183 LIDFGSAKILIAGEPNVSXICSR----YYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
Query: 617 RKSFDIEMG 625
+ F E G
Sbjct: 239 QPLFPGESG 247
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
Q +G+ +LH N ++IH D+K N+ L+D + +I DFGLA + + + KK + G
Sbjct: 150 QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKTLCG 204
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 630
T Y+A PE + VD++S G +L ++ + F+ +E I
Sbjct: 205 TPNYIA-PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 50 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 107
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 164
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 165 CDFGSAKQLVRGEPNVSXICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 618 KSFDIEMG 625
F + G
Sbjct: 221 PIFPGDSG 228
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 63 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 120
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 121 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 177
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 178 CDFGSAKQLVRGEPNVSYICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
Query: 618 KSFDIEMG 625
F + G
Sbjct: 234 PIFPGDSG 241
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 460 EFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANI 519
+FKNE+ +I ++ + G ++Y+++ N ++ F N I
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 520 AFQIARGLLHLHVNCSS------QIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK 573
Q+ + ++ +N S I H D+KP NIL+D ++SDFG ++ +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM------ 202
Query: 574 AIKKAIRGTKGY--VASPEWFRNSTIT--ANVDVYSFGVLL 610
+ K I+G++G PE+F N + A VD++S G+ L
Sbjct: 203 -VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 15/107 (14%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
+Q+ RGL ++H S+Q+IH D+KP N+L+++ +I DFG+A+ L + ++
Sbjct: 166 YQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 222
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF 620
YVA+ W+R + T +D++S G + E+++ R+ F
Sbjct: 223 ----YVAT-RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
Q +G+ +LH N ++IH D+K N+ L+D + +I DFGLA + + + KK + G
Sbjct: 150 QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCG 204
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 630
T Y+A PE + VD++S G +L ++ + F+ +E I
Sbjct: 205 TPNYIA-PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 435 VIQTSTRTTVIVVKKLDRVFQDGEKE-----FKNEVVMIGQTYHKNLVRLLGFCDEGQNR 489
V + R T +V L RV D + E E+ ++ + HKN+VRL +
Sbjct: 18 VFKAKNRETHEIVA-LKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL 76
Query: 490 LLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNIL 549
LV++F + F N + + FQ+ +GL H S ++H D+KPQN+L
Sbjct: 77 TLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLL 133
Query: 550 LDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-------TANVD 602
++ ++++FGLA +A +R V + W+R + + ++D
Sbjct: 134 INRNGELKLANFGLA--------RAFGIPVRCYSAEVVT-LWYRPPDVLFGAKLYSTSID 184
Query: 603 VYSFGVLLLEI 613
++S G + E+
Sbjct: 185 MWSAGCIFAEL 195
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 450 LDRVFQDGEKEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFE 507
+ +V QD K FKN E+ ++ + H N+VRL F G+ + VY L + ++
Sbjct: 50 IKKVLQD--KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 107
Query: 508 NLKPGWNLRANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQI 558
+ + + +Q+ R L ++H S I H DIKPQN+LLD D ++
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKL 164
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L + R Y +PE +T T+++DV+S G +L E++ +
Sbjct: 165 CDFGSAKQLVRGEPNVSYICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 618 KSFDIEMG 625
F + G
Sbjct: 221 PIFPGDSG 228
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
Q +G+ +LH N ++IH D+K N+ L+D + +I DFGLA + + + KK + G
Sbjct: 134 QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCG 188
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 630
T Y+A PE + VD++S G +L ++ + F+ +E I
Sbjct: 189 TPNYIA-PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI 236
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHV 532
H N+VRL E LV+ + G L + ++ QI +LH H
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH- 120
Query: 533 NCSSQIIHCDIKPQNILLDDYYNA---QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
++H D+KP+N+LL +++DFGLA + +Q A GT GY+ SP
Sbjct: 121 --QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYL-SP 175
Query: 590 EWFRNSTITANVDVYSFGVLL 610
E R VD+++ GV+L
Sbjct: 176 EVLRKEAYGKPVDIWACGVIL 196
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 15/107 (14%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
+Q+ RGL ++H S+Q+IH D+KP N+L+++ +I DFG+A+ L S A +
Sbjct: 165 YQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMAR--GLCTSPAEHQYF- 218
Query: 581 GTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF 620
YVA+ W+R + T +D++S G + E+++ R+ F
Sbjct: 219 -MTEYVAT-RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
Q +G+ +LH N ++IH D+K N+ L+D + +I DFGLA + + + KK + G
Sbjct: 150 QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCG 204
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 630
T Y+A PE + VD++S G +L ++ + F+ +E I
Sbjct: 205 TPNYIA-PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L++ + + G L ++ E+ G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFG AKLL + + +
Sbjct: 123 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 180 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHV 532
H N+VRL E + L++ + G L + ++ QI +LH H
Sbjct: 80 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH- 138
Query: 533 NCSSQIIHCDIKPQNILLDDYYNA---QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
++H D+KP+N+LL +++DFGLA + Q A GT GY+ SP
Sbjct: 139 --QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYL-SP 193
Query: 590 EWFRNSTITANVDVYSFGVLL 610
E R VD+++ GV+L
Sbjct: 194 EVLRKDPYGKPVDLWACGVIL 214
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENL-KPGWNLRA 517
KE +E ++ + ++ RLLG C +L++ + + G L ++ E+ G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFG AKLL + + +
Sbjct: 123 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 180 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L++ + + G L ++ E+ G
Sbjct: 66 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 124
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFG AKLL + + +
Sbjct: 125 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 181
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 182 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLL---- 528
H N+V+L + + LV + LN G L FE +K + A I R L+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVS 120
Query: 529 HLHVNCSSQIIHCDIKPQNILL---DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGY 585
H+H ++H D+KP+N+L +D +I DFG A+L + ++ +K +
Sbjct: 121 HMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-NQPLKTPCFTL--H 174
Query: 586 VASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
A+PE + + D++S GV+L ++S + F
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 98/228 (42%), Gaps = 21/228 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENL-KPGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFG AKLL + + +
Sbjct: 128 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 184
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A E + T DV+S+GV + E+++ +D
Sbjct: 185 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT---------------FGSKPYD 228
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
++ ++E C + M+ + C D RP R++
Sbjct: 229 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 21/228 (9%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFG AKLL + + +
Sbjct: 121 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 637
+ ++A E + T DV+S+GV + E+++ G + +D
Sbjct: 178 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT--------FGSK-------PYD 221
Query: 638 CYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
++ ++E C + M+ + C D RP R++
Sbjct: 222 GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLK-PGWNLRA 517
KE +E ++ + ++ RLLG C +L+ + + G L ++ E+ G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
N QIA+G+ +L +++H D+ +N+L+ + +I+DFG AKLL + + +
Sbjct: 123 NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ ++A E + T DV+S+GV + E+++
Sbjct: 180 GGKVPIKWMAL-ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 456 DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNL 515
D +++F +E V++ H ++V+L+G +E + ++ + G L +L N L
Sbjct: 67 DNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL 125
Query: 516 RANI-AFQIARGLLHLH-VNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK 573
+ + QI + + +L +NC +H DI +NIL+ ++ DFGL++ +
Sbjct: 126 TLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY--IEDED 179
Query: 574 AIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K ++ SPE T DV+ F V + EI+S
Sbjct: 180 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHV 532
H N+VRL E LV+ + G L + ++ QI + H H+
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 533 NCSSQIIHCDIKPQNILLDDYYNA---QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
N I+H D+KP+N+LL +++DFGLA + +Q A GT GY+ SP
Sbjct: 122 N---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYL-SP 175
Query: 590 EWFRNSTITANVDVYSFGVLL 610
E R VD+++ GV+L
Sbjct: 176 EVLRKDPYGKPVDMWACGVIL 196
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 435 VIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYK 494
V +T T+ + ++ ++ + E + H N+VRL E LV+
Sbjct: 51 VKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 110
Query: 495 FLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ G L + ++ QI + H+H I+H D+KP+N+LL
Sbjct: 111 LVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH---QHDIVHRDLKPENLLLASKC 167
Query: 555 NA---QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+++DFGLA + Q A GT GY+ SPE R VD+++ GV+L
Sbjct: 168 KGAAVKLADFGLAIEVQGEQQAWFGFA--GTPGYL-SPEVLRKDPYGKPVDIWACGVIL 223
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 444 VIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ +K D +E F E + + Q H ++V+L+G E ++ + G L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 98
Query: 503 SFLFENLKPGWNLRANI--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
SFL + K +L + I A+Q++ L +L S + +H DI +N+L+ ++ D
Sbjct: 99 SFL-QVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEII-SCRK 618
FGL++ + + KA +G +PE T+ DV+ FGV + EI+ K
Sbjct: 155 FGLSRYM---EDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 211
Query: 619 SFD----------IEMGEE-----------YAILTD-WAFDCYRNGKLDDL 647
F IE GE Y+++T WA+D R + +L
Sbjct: 212 PFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 456 DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNL 515
D +++F +E V++ H ++V+L+G +E + ++ + G L +L N L
Sbjct: 55 DNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL 113
Query: 516 RANI-AFQIARGLLHLH-VNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK 573
+ + QI + + +L +NC +H DI +NIL+ ++ DFGL++ +
Sbjct: 114 TLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY--IEDED 167
Query: 574 AIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K ++ SPE T DV+ F V + EI+S
Sbjct: 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 456 DGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNL 515
D +++F +E V++ H ++V+L+G +E + ++ + G L +L N L
Sbjct: 51 DNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL 109
Query: 516 RANI-AFQIARGLLHLH-VNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK 573
+ + QI + + +L +NC +H DI +NIL+ ++ DFGL++ +
Sbjct: 110 TLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY--IEDED 163
Query: 574 AIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
K ++ SPE T DV+ F V + EI+S
Sbjct: 164 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 444 VIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ +K D +E F E + + Q H ++V+L+G E ++ + G L
Sbjct: 68 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 126
Query: 503 SFLFENLKPGWNLRANI--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
SFL + K +L + I A+Q++ L +L S + +H DI +N+L+ ++ D
Sbjct: 127 SFL-QVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 182
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEII-SCRK 618
FGL++ + + KA +G +PE T+ DV+ FGV + EI+ K
Sbjct: 183 FGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 239
Query: 619 SFD----------IEMGEE-----------YAILTD-WAFDCYRNGKLDDL 647
F IE GE Y+++T WA+D R + +L
Sbjct: 240 PFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHV 532
H N+VRL E LV+ + G L + ++ QI + H H+
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 533 NCSSQIIHCDIKPQNILLDDYYNA---QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
N I+H D+KP+N+LL +++DFGLA + +Q A GT GY+ SP
Sbjct: 122 N---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYL-SP 175
Query: 590 EWFRNSTITANVDVYSFGVLL 610
E R VD+++ GV+L
Sbjct: 176 EVLRKDPYGKPVDMWACGVIL 196
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 474 KNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF-ENLKPGWNLRANIAFQIARGLLHLHV 532
+N V+ + + ++ N TL + ENL + + QI L ++H
Sbjct: 75 RNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH- 133
Query: 533 NCSSQIIHCDIKPQNILLDDYYNAQISDFGLAK-------LLTLN------QSKAIKKAI 579
S IIH ++KP NI +D+ N +I DFGLAK +L L+ S + AI
Sbjct: 134 --SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
GT YVA+ +D YS G++ E I
Sbjct: 192 -GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 444 VIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ +K D +E F E + + Q H ++V+L+G E ++ + G L
Sbjct: 45 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 103
Query: 503 SFLFENLKPGWNLRANI--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
SFL + K +L + I A+Q++ L +L S + +H DI +N+L+ ++ D
Sbjct: 104 SFL-QVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 159
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEII-SCRK 618
FGL++ + + KA +G +PE T+ DV+ FGV + EI+ K
Sbjct: 160 FGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 216
Query: 619 SFD----------IEMGEE-----------YAILTD-WAFDCYRNGKLDDL 647
F IE GE Y+++T WA+D R + +L
Sbjct: 217 PFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 444 VIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ +K D +E F E + + Q H ++V+L+G E ++ + G L
Sbjct: 43 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 101
Query: 503 SFLFENLKPGWNLRANI--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
SFL + K +L + I A+Q++ L +L S + +H DI +N+L+ ++ D
Sbjct: 102 SFL-QVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 157
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEII-SCRK 618
FGL++ + + KA +G +PE T+ DV+ FGV + EI+ K
Sbjct: 158 FGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 214
Query: 619 SFD----------IEMGEE-----------YAILTD-WAFDCYRNGKLDDL 647
F IE GE Y+++T WA+D R + +L
Sbjct: 215 PFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 27/175 (15%)
Query: 464 EVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFE--NLKPGWNLRANIAF 521
EV ++ H N+V L ++ LV+++L+ L +L + N+ N++ + F
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKD-LKQYLDDCGNIINMHNVKLFL-F 107
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
Q+ RGL + H +++H D+KPQN+L+++ +++DFGLA+ +K+I
Sbjct: 108 QLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLAR------AKSIP----- 153
Query: 582 TKGY--VASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
TK Y W+R I + +D++ G + E+ + R F EE
Sbjct: 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
QI G +LH N ++IH D+K N+ L++ +I DFGLA + + + KK + G
Sbjct: 147 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCG 201
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
T Y+A PE + VDV+S G ++ ++ + F+
Sbjct: 202 TPNYIA-PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 444 VIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ +K D +E F E + + Q H ++V+L+G E ++ + G L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 98
Query: 503 SFLFENLKPGWNLRANI--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
SFL + K +L + I A+Q++ L +L S + +H DI +N+L+ ++ D
Sbjct: 99 SFL-QVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEII-SCRK 618
FGL++ + + KA +G +PE T+ DV+ FGV + EI+ K
Sbjct: 155 FGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 211
Query: 619 SFD----------IEMGEE-----------YAILTD-WAFDCYRNGKLDDL 647
F IE GE Y+++T WA+D R + +L
Sbjct: 212 PFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
QI G +LH N ++IH D+K N+ L++ +I DFGLA + + + KK + G
Sbjct: 149 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCG 203
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
T Y+A PE + VDV+S G ++ ++ + F+
Sbjct: 204 TPNYIA-PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 444 VIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ +K D +E F E + + Q H ++V+L+G E ++ + G L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 98
Query: 503 SFLFENLKPGWNLRANI--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
SFL + K +L + I A+Q++ L +L S + +H DI +N+L+ ++ D
Sbjct: 99 SFL-QVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEII-SCRK 618
FGL++ + + KA +G +PE T+ DV+ FGV + EI+ K
Sbjct: 155 FGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 211
Query: 619 SFD----------IEMGEE-----------YAILTD-WAFDCYRNGKLDDL 647
F IE GE Y+++T WA+D R + +L
Sbjct: 212 PFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 19/181 (10%)
Query: 447 VKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLF 506
VK +D+ +D +E + +++ H N++ L D+G+ +V + G L +
Sbjct: 52 VKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL 108
Query: 507 ENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNIL-LDDYYNAQ---ISDFG 562
+ + F I + + +LH + ++H D+KP NIL +D+ N + I DFG
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFG 165
Query: 563 LAKLLTLNQSKAIKKAIRGTKGYVA---SPEWFRNSTITANVDVYSFGVLLLEIISCRKS 619
AK L + + T Y A +PE A D++S GVLL ++
Sbjct: 166 FAKQLR------AENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
Query: 620 F 620
F
Sbjct: 220 F 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
QI G +LH N ++IH D+K N+ L++ +I DFGLA + + + KK + G
Sbjct: 125 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCG 179
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
T Y+A PE + VDV+S G ++ ++ + F+
Sbjct: 180 TPNYIA-PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 23/227 (10%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL--FENLKPGWNLRANIA 520
E+ ++ Q H N+++ E +V + + G L+ + F+ K R
Sbjct: 81 KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWK 140
Query: 521 F--QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+ Q+ L H+H S +++H DIKP N+ + ++ D GL + + + A +
Sbjct: 141 YFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HS 195
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
+ GT Y+ SPE + D++S G LL E+ + + F + Y++ C
Sbjct: 196 LVGTPYYM-SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL-------C 247
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
+ + + D + E+L + CI DP RP + V
Sbjct: 248 KK------IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 444 VIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ +K D +E F E + + Q H ++V+L+G E ++ + G L
Sbjct: 42 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 100
Query: 503 SFLFENLKPGWNLRANI--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
SFL + K +L + I A+Q++ L +L S + +H DI +N+L+ ++ D
Sbjct: 101 SFL-QVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 156
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEII-SCRK 618
FGL++ + + KA +G +PE T+ DV+ FGV + EI+ K
Sbjct: 157 FGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 213
Query: 619 SFD----------IEMGEE-----------YAILTD-WAFDCYRNGKLDDL 647
F IE GE Y+++T WA+D R + +L
Sbjct: 214 PFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
QI G +LH N ++IH D+K N+ L++ +I DFGLA + + + KK + G
Sbjct: 129 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCG 183
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
T Y+A PE + VDV+S G ++ ++ + F+
Sbjct: 184 TPNYIA-PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
QI G +LH N ++IH D+K N+ L++ +I DFGLA + + + KK + G
Sbjct: 125 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCG 179
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
T Y+A PE + VDV+S G ++ ++ + F+
Sbjct: 180 TPNYIA-PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 444 VIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ +K D +E F E + + Q H ++V+L+G E ++ + G L
Sbjct: 37 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 95
Query: 503 SFLFENLKPGWNLRANI--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
SFL + K +L + I A+Q++ L +L S + +H DI +N+L+ ++ D
Sbjct: 96 SFL-QVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 151
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEII-SCRK 618
FGL++ + + KA +G +PE T+ DV+ FGV + EI+ K
Sbjct: 152 FGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 208
Query: 619 SFD----------IEMGEE-----------YAILTD-WAFDCYRNGKLDDL 647
F IE GE Y+++T WA+D R + +L
Sbjct: 209 PFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLD 162
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 216
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 22/128 (17%)
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNIL--LDDYYNAQISDFGLAK---------- 565
+I QIA + LH S ++H D+KP NI +DD ++ DFGL
Sbjct: 168 HIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDV--VKVGDFGLVTAMDQDEEEQT 222
Query: 566 LLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMG 625
+LT + A GTK Y+ SPE + + VD++S G++L E++ SF +M
Sbjct: 223 VLTPMPAYATHXGQVGTKLYM-SPEQIHGNNYSHKVDIFSLGLILFELLY---SFSTQM- 277
Query: 626 EEYAILTD 633
E I+TD
Sbjct: 278 ERVRIITD 285
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 21/196 (10%)
Query: 429 NFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQN 488
+F V Q + + K +D ++ +++ E+ ++ H N+V+LL N
Sbjct: 22 DFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN 81
Query: 489 RLLVYKFLNNGTLASFLFENLKPGWNLRANIAF-QIARGLLHLHVNCSSQIIHCDIKPQN 547
++ +F G + + + E +P + + Q L +LH N +IIH D+K N
Sbjct: 82 LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGN 138
Query: 548 ILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN------- 600
IL + +++DFG++ +K + I+ ++ +P W +
Sbjct: 139 ILFTLDGDIKLADFGVS-------AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 601 ---VDVYSFGVLLLEI 613
DV+S G+ L+E+
Sbjct: 192 DYKADVWSLGITLIEM 207
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 459 KEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR 516
K FKN E+ ++ + H N+VRL F G+ + VY L + + ++ + +
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAK 116
Query: 517 ANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLL 567
+ +Q+ R L ++H S I H DIKPQN+LLD D ++ DFG AK L
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 568 TLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSFDIEMG 625
+ R Y +PE +T T+++DV+S G +L E++ + F + G
Sbjct: 174 VRGEPNVSXICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
QI G +LH N ++IH D+K N+ L++ +I DFGLA + + + KK + G
Sbjct: 123 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCG 177
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
T Y+A PE + VDV+S G ++ ++ + F+
Sbjct: 178 TPNYIA-PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 444 VIVVKKLDRVFQDGEKE-FKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
+ +K D +E F E + + Q H ++V+L+G E ++ + G L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 98
Query: 503 SFLFENLKPGWNLRANI--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISD 560
SFL + K +L + I A+Q++ L +L S + +H DI +N+L+ ++ D
Sbjct: 99 SFL-QVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGD 154
Query: 561 FGLAKLLTLNQSKAIKKAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEII-SCRK 618
FGL++ + + KA +G +PE T+ DV+ FGV + EI+ K
Sbjct: 155 FGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 211
Query: 619 SFD----------IEMGEE-----------YAILTD-WAFDCYRNGKLDDL 647
F IE GE Y+++T WA+D R + +L
Sbjct: 212 PFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 514 NLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSK 573
++ IA I + L HLH S +IH D+KP N+L++ + DFG++ L + +K
Sbjct: 136 DILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAK 193
Query: 574 AIKKAIRGTKGYVA----SPEWFRNSTITANVDVYSFGVLLLEIISCRKSFD 621
I G K Y A +PE + D++S G+ +E+ R +D
Sbjct: 194 DIDA---GCKPYXAPERINPE-LNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLA-PEIILSKGY 216
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF 521
K E ++ + H +V L+ G L+ ++L+ G L + + G + F
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACF 125
Query: 522 ---QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+I+ L HLH II+ D+KP+NI+L+ + +++DFGL K + + +
Sbjct: 126 YLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHT 180
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
GT Y+A PE S VD +S G L+ ++++ F GE D C
Sbjct: 181 FCGTIEYMA-PEILMRSGHNRAVDWWSLGALMYDMLTGAPPF---TGENRKKTIDKILKC 236
Query: 639 YRN 641
N
Sbjct: 237 KLN 239
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 7/161 (4%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ K E + H ++V LL +V++F++ L + + G+
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 519 IAFQIARGLLHLHVNCS-SQIIHCDIKPQNILLDDYYNA---QISDFGLAKLLTLNQSKA 574
+A R +L C + IIH D+KP +LL N+ ++ FG+A + L +S
Sbjct: 131 VASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGL 188
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ GT ++A PE + VDV+ GV+L ++S
Sbjct: 189 VAGGRVGTPHFMA-PEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 7/161 (4%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++ K E + H ++V LL +V++F++ L + + G+
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 132
Query: 519 IAFQIARGLLHLHVNCS-SQIIHCDIKPQNILLDDYYNA---QISDFGLAKLLTLNQSKA 574
+A R +L C + IIH D+KP +LL N+ ++ FG+A + L +S
Sbjct: 133 VASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGL 190
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIIS 615
+ GT ++A PE + VDV+ GV+L ++S
Sbjct: 191 VAGGRVGTPHFMA-PEVVKREPYGKPVDVWGCGVILFILLS 230
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 216
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 443 TVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
T +++K LD+ ++ + F M+ + HK+LV G C G +LV +F+ G+L
Sbjct: 41 TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLD 100
Query: 503 SFLFEN---LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQIS 559
++L +N + W L +A Q+A + L N +IH ++ +NILL + +
Sbjct: 101 TYLKKNKNCINILWKLE--VAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTG 155
Query: 560 DFGLAKLLTLNQS-KAIKKAIRGTKGYVASPEWFRN-STITANVDVYSFGVLLLEIIS 615
+ KL S + K I + PE N + D +SFG L EI S
Sbjct: 156 NPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF 521
K E ++ + H +V L+ G L+ ++L+ G L + + G + F
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACF 125
Query: 522 ---QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKA 578
+I+ L HLH II+ D+KP+NI+L+ + +++DFGL K + + +
Sbjct: 126 YLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHX 180
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
GT Y+A PE S VD +S G L+ ++++ F GE D C
Sbjct: 181 FCGTIEYMA-PEILMRSGHNRAVDWWSLGALMYDMLTGAPPF---TGENRKKTIDKILKC 236
Query: 639 YRN 641
N
Sbjct: 237 KLN 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 31 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 90
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 91 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 147
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLA-PEIILSKGY 201
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 202 NKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFK-NEVVMIGQTYHKNL 476
R LG+ F LV ++T + ++ K +V + E E NE ++ L
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKEIEHTLNEKRILQAVNFPFL 103
Query: 477 VRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSS 536
V+L + N +V ++ G + S L + G + F A+ +L S
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 537 QIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST 596
+I+ D+KP+N+++D Q++DFGLAK + K + GT Y+A PE +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLA-PEIILSKG 214
Query: 597 ITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
+ + ++ G+L L + + + ++ + +GL +L +I+H D+KP NIL+
Sbjct: 143 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILV 200
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+ ++ DFG++ L ++ + GT+ Y+ SPE + + + D++S G+ L
Sbjct: 201 NSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYM-SPERLQGTHYSVQSDIWSMGLSL 255
Query: 611 LEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 642
+E+ R +E ++ F C G
Sbjct: 256 VEMAVGRYPIPPPDAKELELM----FGCQVEG 283
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 473 HKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHV 532
H N+VRL E + L++ + G L + ++ QI +LH H
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH- 127
Query: 533 NCSSQIIHCDIKPQNILLDDYYNA---QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
++H ++KP+N+LL +++DFGLA + Q A GT GY+ SP
Sbjct: 128 --QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYL-SP 182
Query: 590 EWFRNSTITANVDVYSFGVLL 610
E R VD+++ GV+L
Sbjct: 183 EVLRKDPYGKPVDLWACGVIL 203
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSS-----QIIHCDIKP 545
L+ + NG+L +L ++ +A+ GL HLH S I H D+K
Sbjct: 112 LITDYHENGSLYDYLKSTTLDAKSM-LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKS 170
Query: 546 QNILLDDYYNAQISDFGLA-KLLTLNQSKAIKKAIR-GTKGYVASPEWFRNSTITAN--- 600
+NIL+ I+D GLA K ++ I R GTK Y+ P + ++ N
Sbjct: 171 KNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM--PPEVLDESLNRNHFQ 228
Query: 601 ----VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD--MEA 654
D+YSFG++L E+ R+ + EEY + DLV D E
Sbjct: 229 SYIMADMYSFGLILWEV--ARRCVSGGIVEEYQL------------PYHDLVPSDPSYED 274
Query: 655 MNDIKCVEKL 664
M +I C++KL
Sbjct: 275 MREIVCIKKL 284
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 31/185 (16%)
Query: 473 HKNLVRLLG-----FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGL 527
H N+ R + D LLV ++ NG+L +L + W +A + RGL
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-DWVSSCRLAHSVTRGL 124
Query: 528 LHLHVNC------SSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQ--------SK 573
+LH I H D+ +N+L+ + ISDFGL+ LT N+ +
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 574 AIKKAIRGTKGYVASPEWFRNS-------TITANVDVYSFGVLLLEI-ISCRKSFDIEMG 625
AI + GT Y+A PE + + VD+Y+ G++ EI + C F E
Sbjct: 185 AISEV--GTIRYMA-PEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241
Query: 626 EEYAI 630
EY +
Sbjct: 242 PEYQM 246
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 459 KEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR 516
K FKN E+ ++ + H N+VRL F G+ + VY L + ++ + +
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 517 ANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLL 567
+ +Q+ R L ++H S I H DIKPQN+LLD D ++ DFG AK L
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 568 TLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSFDIEMG 625
+ R Y +PE +T T+++DV+S G +L E++ + F + G
Sbjct: 174 VRGEPNVSYICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 459 KEFKN-EVVMIGQTYHKNLVRL-LGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLR 516
K FKN E+ ++ + H N+VRL F G+ + VY L + ++ + +
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 517 ANIA--------FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLL 567
+ +Q+ R L ++H S I H DIKPQN+LLD D ++ DFG AK L
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 568 TLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCRKSFDIEMG 625
+ R Y +PE +T T+++DV+S G +L E++ + F + G
Sbjct: 174 VRGEPNVSYICSR----YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 34/215 (15%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++F E + + Q H ++V+L+G E ++ + G L SFL + K +L +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL-QVRKFSLDLASL 493
Query: 519 I--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
I A+Q++ L +L S + +H DI +N+L+ ++ DFGL++ + +
Sbjct: 494 ILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYY 547
Query: 577 KAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEII-SCRKSFD----------IEM 624
KA +G +PE T+ DV+ FGV + EI+ K F IE
Sbjct: 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 607
Query: 625 GEE-----------YAILTD-WAFDCYRNGKLDDL 647
GE Y+++T WA+D R + +L
Sbjct: 608 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 443 TVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLA 502
T +++K LD+ ++ + F M+ + HK+LV G C G +LV +F+ G+L
Sbjct: 41 TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLD 100
Query: 503 SFLFEN---LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQIS 559
++L +N + W L +A Q+A + L N +IH ++ +NILL + +
Sbjct: 101 TYLKKNKNCINILWKLE--VAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTG 155
Query: 560 DFGLAKLLTLNQS-KAIKKAIRGTKGYVASPEWFRN-STITANVDVYSFGVLLLEIIS 615
+ KL S + K I + PE N + D +SFG L EI S
Sbjct: 156 NPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 34/215 (15%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRAN 518
++F E + + Q H ++V+L+G E ++ + G L SFL + K +L +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL-QVRKFSLDLASL 493
Query: 519 I--AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
I A+Q++ L +L S + +H DI +N+L+ ++ DFGL++ + +
Sbjct: 494 ILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYY 547
Query: 577 KAIRGTKGYV-ASPEWFRNSTITANVDVYSFGVLLLEII-SCRKSFD----------IEM 624
KA +G +PE T+ DV+ FGV + EI+ K F IE
Sbjct: 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 607
Query: 625 GEE-----------YAILTD-WAFDCYRNGKLDDL 647
GE Y+++T WA+D R + +L
Sbjct: 608 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
+ + ++ G+L L + + + ++ + +GL +L +I+H D+KP NIL+
Sbjct: 108 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILV 165
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+ ++ DFG++ L ++ + GT+ Y+ SPE + + + D++S G+ L
Sbjct: 166 NSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYM-SPERLQGTHYSVQSDIWSMGLSL 220
Query: 611 LEIISCR 617
+E+ R
Sbjct: 221 VEMAVGR 227
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
+ + ++ G+L L + + + ++ + +GL +L +I+H D+KP NIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILV 138
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+ ++ DFG++ L ++ + GT+ Y+ SPE + + + D++S G+ L
Sbjct: 139 NSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYM-SPERLQGTHYSVQSDIWSMGLSL 193
Query: 611 LEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 642
+E+ R +E ++ F C G
Sbjct: 194 VEMAVGRYPIPPPDAKELELM----FGCQVEG 221
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
+ + ++ G+L L + + + ++ + +GL +L +I+H D+KP NIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILV 138
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+ ++ DFG++ L ++ + GT+ Y+ SPE + + + D++S G+ L
Sbjct: 139 NSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYM-SPERLQGTHYSVQSDIWSMGLSL 193
Query: 611 LEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 642
+E+ R +E ++ F C G
Sbjct: 194 VEMAVGRYPIPPPDAKELELM----FGCQVEG 221
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 444 VIVVKKLDRVFQDGEKEFKN-----EVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNN 498
++ +KK+ + K+ N E+ ++ + H N++ LL N LV+ F+
Sbjct: 37 IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET 96
Query: 499 GTLASFLFEN---LKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN 555
L + +N L P +++A + + +GL +LH I+H D+KP N+LLD+
Sbjct: 97 -DLEVIIKDNSLVLTPS-HIKAYMLMTL-QGLEYLH---QHWILHRDLKPNNLLLDENGV 150
Query: 556 AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
+++DFGLAK + + T+ Y A F VD+++ G +L E++
Sbjct: 151 LKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + +++K + +D E ++ T H L L
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 75
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANI-AFQIARGLLHLHVNCSSQI 538
+ + +RL V ++ N G L F + RA +I L +LH S +
Sbjct: 76 KYAFQTHDRLCFVMEYANGGELF-FHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 131
Query: 539 IHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
++ DIK +N++LD + +I+DFGL K A K GT Y+A PE ++
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA-PEVLEDNDYG 188
Query: 599 ANVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + +++K + +D E ++ T H L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 70
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANI-AFQIARGLLHLHVNCSSQI 538
+ + +RL V ++ N G L F + RA +I L +LH S +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELF-FHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 126
Query: 539 IHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
++ DIK +N++LD + +I+DFGL K A K GT Y+A PE ++
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLA-PEVLEDNDYG 183
Query: 599 ANVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV +T + ++ K V + NE ++ LV
Sbjct: 38 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 98 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLD 154
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 208
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 494 KFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY 553
+ ++ G+L L + + + ++ + +GL +L +I+H D+KP NIL++
Sbjct: 103 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSR 160
Query: 554 YNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEI 613
++ DFG++ L ++ + GT+ Y+ SPE + + + D++S G+ L+E+
Sbjct: 161 GEIKLCDFGVSGQLI----DSMANSFVGTRSYM-SPERLQGTHYSVQSDIWSMGLSLVEM 215
Query: 614 ISCR 617
R
Sbjct: 216 AVGR 219
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
+ + ++ G+L L + + + ++ + +GL +L +I+H D+KP NIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILV 138
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+ ++ DFG++ L ++ + GT+ Y+ SPE + + + D++S G+ L
Sbjct: 139 NSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYM-SPERLQGTHYSVQSDIWSMGLSL 193
Query: 611 LEIISCR 617
+E+ R
Sbjct: 194 VEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
+ + ++ G+L L + + + ++ + +GL +L +I+H D+KP NIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILV 138
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
+ ++ DFG++ L ++ + GT+ Y+ SPE + + + D++S G+ L
Sbjct: 139 NSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYM-SPERLQGTHYSVQSDIWSMGLSL 193
Query: 611 LEIISCR 617
+E+ R
Sbjct: 194 VEMAVGR 200
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + +++K + +D E ++ T H L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 70
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANI-AFQIARGLLHLHVNCSSQI 538
+ + +RL V ++ N G L F + RA +I L +LH S +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELF-FHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 126
Query: 539 IHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
++ DIK +N++LD + +I+DFGL K A K GT Y+A PE ++
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA-PEVLEDNDYG 183
Query: 599 ANVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 461 FKNEVVMIGQTYHK-NLVRLLGFC----DEGQNRLLVYKFLNNGTLASFLFENLKPGWNL 515
+N+++ Q H+ N ++GF +G+ + + + ++ G+L L + + +
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQI 105
Query: 516 RANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAI 575
++ + +GL +L +I+H D+KP NIL++ ++ DFG++ L ++
Sbjct: 106 LGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSM 159
Query: 576 KKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCR 617
+ GT+ Y+ SPE + + + D++S G+ L+E+ R
Sbjct: 160 ANSFVGTRSYM-SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + +++K + +D E ++ T H L L
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 73
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANI-AFQIARGLLHLHVNCSSQI 538
+ + +RL V ++ N G L F + RA +I L +LH S +
Sbjct: 74 KYAFQTHDRLCFVMEYANGGELF-FHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 129
Query: 539 IHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
++ DIK +N++LD + +I+DFGL K A K GT Y+A PE ++
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLA-PEVLEDNDYG 186
Query: 599 ANVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + +++K + +D E ++ T H L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 70
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANI-AFQIARGLLHLHVNCSSQI 538
+ + +RL V ++ N G L F + RA +I L +LH S +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELF-FHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 126
Query: 539 IHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
++ DIK +N++LD + +I+DFGL K A K GT Y+A PE ++
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA-PEVLEDNDYG 183
Query: 599 ANVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + +++K + +D E ++ T H L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 70
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANI-AFQIARGLLHLHVNCSSQI 538
+ + +RL V ++ N G L F + RA +I L +LH S +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELF-FHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 126
Query: 539 IHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
++ DIK +N++LD + +I+DFGL K A K GT Y+A PE ++
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLA-PEVLEDNDYG 183
Query: 599 ANVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + +++K + +D E ++ T H L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 70
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANI-AFQIARGLLHLHVNCSSQI 538
+ + +RL V ++ N G L F + RA +I L +LH S +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELF-FHLSRERVFTEERARFYGAEIVSALEYLH---SRDV 126
Query: 539 IHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTIT 598
++ DIK +N++LD + +I+DFGL K A K GT Y+A PE ++
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA-PEVLEDNDYG 183
Query: 599 ANVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 464 EVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF-- 521
E+ ++ + H N+V+L + +LV++ L+ L + + G +F
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLL 107
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
Q+ G+ + H +++H D+KPQN+L++ +I+DFGLA+ + K + +
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-- 162
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
T Y A + + +D++S G + E+++ F
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV +T + ++ K V + NE ++ LV
Sbjct: 66 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 126 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 182
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 236
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 464 EVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF-- 521
E+ ++ + H N+V+L + +LV++ L+ L + + G +F
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLL 107
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
Q+ G+ + H +++H D+KPQN+L++ +I+DFGLA+ + K + +
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-- 162
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
T Y A + + +D++S G + E+++ F
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLF 201
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV +T + ++ K V + NE ++ LV
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 216
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLA-PEIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 527 LLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYV 586
L HLH S ++H D+KP NI L ++ DFGL L+ L + A + G Y+
Sbjct: 170 LAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGA-GEVQEGDPRYM 223
Query: 587 ASPEWFRNSTITANVDVYSFGVLLLEI 613
A PE + S TA DV+S G+ +LE+
Sbjct: 224 A-PELLQGSYGTA-ADVFSLGLTILEV 248
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV +T + ++ K V + NE ++ LV
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 216
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV +T + ++ K V + NE ++ LV
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 216
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 22/128 (17%)
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNIL--LDDYYNAQISDFGLAK---------- 565
+I QIA + LH S ++H D+KP NI +DD ++ DFGL
Sbjct: 122 HIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDV--VKVGDFGLVTAMDQDEEEQT 176
Query: 566 LLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMG 625
+LT + A GTK Y+ SPE ++ + VD++S G++L E++ F +M
Sbjct: 177 VLTPMPAYARHTGQVGTKLYM-SPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM- 231
Query: 626 EEYAILTD 633
E LTD
Sbjct: 232 ERVRTLTD 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V ++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+++D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV +T + ++ K V + NE ++ LV
Sbjct: 38 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 98 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 154
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 208
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV +T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV +T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFK-NEVVMIGQTYHKNL 476
R LG+ F LV ++T + ++ K +V + E E NE ++ L
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKEIEHTLNEKRILQAVNFPFL 103
Query: 477 VRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSS 536
V+L + N +V ++ G + S L + G + F A+ +L S
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 537 QIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST 596
+I+ D+KP+N+++D +++DFGLAK + K + GT Y+A PE +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLA-PEIILSKG 214
Query: 597 ITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV +T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLA-PEIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 464 EVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF-- 521
E+ ++ + H N+V+L + +LV++ L+ L + + G +F
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLL 107
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRG 581
Q+ G+ + H +++H D+KPQN+L++ +I+DFGLA+ + K + +
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-- 162
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
T Y A + + +D++S G + E+++ F
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 437 QTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFL 496
Q + + K +D ++ +++ E+ ++ H N+V+LL N ++ +F
Sbjct: 57 QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 116
Query: 497 NNGTLASFLFENLKPGWNLRANIAF-QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN 555
G + + + E +P + + Q L +LH N +IIH D+K NIL +
Sbjct: 117 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGD 173
Query: 556 AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN----------VDVYS 605
+++DFG++ T + I+ ++ +P W + DV+S
Sbjct: 174 IKLADFGVSAKNT--------RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 225
Query: 606 FGVLLLEI 613
G+ L+E+
Sbjct: 226 LGITLIEM 233
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++ + ++ K V + NE ++ LV
Sbjct: 66 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 182
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLA-PEIILSKGY 236
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 456 DGEKEFKNEVVMIGQTYHKNLVRLLG--FCDEGQNRLLVYKFLNNGTLASFLFENLKPGW 513
+GE K E+ ++ + HKN+++L+ + +E Q +V ++ G K
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFP 107
Query: 514 NLRANIAF-QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQS 572
+A+ F Q+ GL +LH S I+H DIKP N+LL +IS G+A+ L +
Sbjct: 108 VCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164
Query: 573 KAIKKAIRGTKGYVASPEWFRNSTITAN---VDVYSFGVLLLEIISCRKSFD 621
+ +G+ + P N T + VD++S GV L I + F+
Sbjct: 165 DDTCRTSQGSPAF--QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D+ Q++DFG AK + K + GT Y+A PE +
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSK 200
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 437 QTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFL 496
Q + + K +D ++ +++ E+ ++ H N+V+LL N ++ +F
Sbjct: 57 QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 116
Query: 497 NNGTLASFLFENLKPGWNLRANIAF-QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN 555
G + + + E +P + + Q L +LH N +IIH D+K NIL +
Sbjct: 117 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGD 173
Query: 556 AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN----------VDVYS 605
+++DFG++ T + I+ ++ +P W + DV+S
Sbjct: 174 IKLADFGVSAKNT--------RXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 225
Query: 606 FGVLLLEI 613
G+ L+E+
Sbjct: 226 LGITLIEM 233
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 19/260 (7%)
Query: 422 LGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKN------EVVMIGQTYHKN 475
LGS F F V + + V+ K ++V +D E E+ ++ + H N
Sbjct: 32 LGSGAF-GFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHAN 90
Query: 476 LVRLLG-FCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNC 534
++++L F ++G +L++ K + L +F+ + + L + I Q+ + +L +
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK- 149
Query: 535 SSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRN 594
IIH DIK +NI++ + + ++ DFG A L + + GT Y A N
Sbjct: 150 --DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCGTIEYCAPEVLMGN 204
Query: 595 STITANVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFDCYRNGKLDDLVEGDME 653
++++S GV L ++ F ++E E AI + + +L LV G ++
Sbjct: 205 PYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLV----SKELMSLVSGLLQ 260
Query: 654 AMNDIKCVEKLVMVSIWCIQ 673
+ + + + ++ W Q
Sbjct: 261 PVPERRTTLEKLVTDPWVTQ 280
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++ + ++ K V + NE ++ LV
Sbjct: 66 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLD 182
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 236
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++ + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSK 208
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R +G+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D +++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R +G+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D +++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 494 KFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDY 553
+ ++ G+L L + + + ++ + +GL +L +I+H D+KP NIL++
Sbjct: 87 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSR 144
Query: 554 YNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEI 613
++ DFG++ L + GT+ Y+ SPE + + + D++S G+ L+E+
Sbjct: 145 GEIKLCDFGVSGQLI----DEMANEFVGTRSYM-SPERLQGTHYSVQSDIWSMGLSLVEM 199
Query: 614 ISCR 617
R
Sbjct: 200 AVGR 203
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V ++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+++D +++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 437 QTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFL 496
Q + + K +D ++ +++ E+ ++ H N+V+LL N ++ +F
Sbjct: 57 QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 116
Query: 497 NNGTLASFLFENLKPGWNLRANIAF-QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN 555
G + + + E +P + + Q L +LH N +IIH D+K NIL +
Sbjct: 117 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGD 173
Query: 556 AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITAN----------VDVYS 605
+++DFG++ T + I+ ++ +P W + DV+S
Sbjct: 174 IKLADFGVSAKNT--------RXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 225
Query: 606 FGVLLLEI 613
G+ L+E+
Sbjct: 226 LGITLIEM 233
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 517 ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK 576
I + L HL N +IIH DIKP NILLD N ++ DFG++ L + +K
Sbjct: 128 GKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD 185
Query: 577 KAIRGTKGYVASPEWFRNST----ITANVDVYSFGVLLLEIISCR 617
G + Y+A PE S DV+S G+ L E+ + R
Sbjct: 186 A---GCRPYMA-PERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 7/201 (3%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + ++KK V +D E ++ + H L L
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT-AL 216
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
+ + +RL V ++ N G L L + +I L +LH ++
Sbjct: 217 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVV 274
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA 599
+ D+K +N++LD + +I+DFGL K + A K GT Y+A PE ++
Sbjct: 275 YRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKTFCGTPEYLA-PEVLEDNDYGR 331
Query: 600 NVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 332 AVDWWGLGVVMYEMMCGRLPF 352
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 7/201 (3%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + ++KK V +D E ++ + H L L
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT-AL 75
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
+ + +RL V ++ N G L L + +I L +LH ++
Sbjct: 76 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVV 133
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA 599
+ D+K +N++LD + +I+DFGL K + A K GT Y+A PE ++
Sbjct: 134 YRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKXFCGTPEYLA-PEVLEDNDYGR 190
Query: 600 NVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 191 AVDWWGLGVVMYEMMCGRLPF 211
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R +G+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D +++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++ + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 7/201 (3%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + ++KK V +D E ++ + H L L
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT-AL 213
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
+ + +RL V ++ N G L L + +I L +LH ++
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVV 271
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA 599
+ D+K +N++LD + +I+DFGL K + A K GT Y+A PE ++
Sbjct: 272 YRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKTFCGTPEYLA-PEVLEDNDYGR 328
Query: 600 NVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 329 AVDWWGLGVVMYEMMCGRLPF 349
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 7/201 (3%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + ++KK V +D E ++ + H L L
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT-AL 74
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
+ + +RL V ++ N G L L + +I L +LH ++
Sbjct: 75 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVV 132
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA 599
+ D+K +N++LD + +I+DFGL K + A K GT Y+A PE ++
Sbjct: 133 YRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKXFCGTPEYLA-PEVLEDNDYGR 189
Query: 600 NVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPF 210
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSK 214
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 519 IAFQIARGLLHLHVNC-----SSQIIHCDIKPQNILLDDYYNAQISDFGLAKL--LTLNQ 571
I IA GL HLH+ I H D+K +NIL+ I+D GLA + + NQ
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 198
Query: 572 SKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFGVLLLEI 613
GTK Y+A PE + TI + VD+++FG++L E+
Sbjct: 199 LDVGNNPRVGTKRYMA-PE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 459 KEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFL-FENLKPGWNLRA 517
+E E+ ++ Q ++V+ G + + +V ++ G+++ + N + A
Sbjct: 69 QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA 128
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKK 577
I +GL +LH + IH DIK NILL+ +A+++DFG+A LT +K +
Sbjct: 129 TILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK--RN 183
Query: 578 AIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
+ GT ++A PE + D++S G+ +E+ + +
Sbjct: 184 XVIGTPFWMA-PEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 519 IAFQIARGLLHLHVNC-----SSQIIHCDIKPQNILLDDYYNAQISDFGLAKL--LTLNQ 571
I IA GL HLH+ I H D+K +NIL+ I+D GLA + + NQ
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
Query: 572 SKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFGVLLLEI 613
GTK Y+A PE + TI + VD+++FG++L E+
Sbjct: 170 LDVGNNPRVGTKRYMA-PE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 7/201 (3%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
LLG F LV T + ++KK V +D E ++ + H L L
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT-AL 73
Query: 481 GFCDEGQNRL-LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
+ + +RL V ++ N G L L + +I L +LH ++
Sbjct: 74 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVV 131
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA 599
+ D+K +N++LD + +I+DFGL K + A K GT Y+A PE ++
Sbjct: 132 YRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKXFCGTPEYLA-PEVLEDNDYGR 188
Query: 600 NVDVYSFGVLLLEIISCRKSF 620
VD + GV++ E++ R F
Sbjct: 189 AVDWWGLGVVMYEMMCGRLPF 209
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
L+ ++N G L + L + + + +I L HLH II+ DIK +NILL
Sbjct: 136 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILL 192
Query: 551 DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFR--NSTITANVDVYSFGV 608
D + ++DFGL+K ++++ GT Y+A P+ R +S VD +S GV
Sbjct: 193 DSNGHVVLTDFGLSKEFVADETERAYDFC-GTIEYMA-PDIVRGGDSGHDKAVDWWSLGV 250
Query: 609 LLLEIISCRKSFDIE 623
L+ E+++ F ++
Sbjct: 251 LMYELLTGASPFTVD 265
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 434 GVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQ----TYHKNLVRL------LGFC 483
G +Q + + + +V QD F+N + I Q +H N+V+L LG
Sbjct: 37 GTVQLGKEKSTGMSVAIKKVIQD--PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94
Query: 484 DEGQNRLLVYKFLNNGTLA----SFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQII 539
D L V TL ++ + P L FQ+ R + LH+ S +
Sbjct: 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVC 153
Query: 540 HCDIKPQNILLDDYYNA-QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEW-FRNSTI 597
H DIKP N+L+++ ++ DFG AK L+ ++ R Y +PE F N
Sbjct: 154 HRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR----YYRAPELIFGNQHY 209
Query: 598 TANVDVYSFGVLLLEII 614
T VD++S G + E++
Sbjct: 210 TTAVDIWSVGCIFAEMM 226
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 519 IAFQIARGLLHLHVNC-----SSQIIHCDIKPQNILLDDYYNAQISDFGLAKL--LTLNQ 571
I IA GL HLH+ I H D+K +NIL+ I+D GLA + + NQ
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
Query: 572 SKAIKKAIRGTKGYVASPEWFRNSTITAN-------VDVYSFGVLLLEI 613
GTK Y+A PE + TI + VD+++FG++L E+
Sbjct: 170 LDVGNNPRVGTKRYMA-PE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 443 TVIVVKKLDRVFQDGEKEFKNEV-VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTL 501
V V++K + + EK +E V++ H LV L V ++N G L
Sbjct: 67 AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 126
Query: 502 ASFLFEN---LKPGWNLRANI-AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
L L+P RA A +IA L +LH S I++ D+KP+NILLD +
Sbjct: 127 FYHLQRERCFLEP----RARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIV 179
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
++DFGL K + S GT Y+A PE VD + G +L E++
Sbjct: 180 LTDFGLCKENIEHNSTT--STFCGTPEYLA-PEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNC 534
+V L G EG + + L G+L + E + Q GL +LH
Sbjct: 146 RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLH--- 202
Query: 535 SSQIIHCDIKPQNILL-DDYYNAQISDFGLAKLLT---LNQSKAIKKAIRGTKGYVASPE 590
S +I+H D+K N+LL D +A + DFG A L L +S I GT+ ++A PE
Sbjct: 203 SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMA-PE 261
Query: 591 WFRNSTITANVDVYSFGVLLLEII 614
+ A VDV+S ++L ++
Sbjct: 262 VVLGRSCDAKVDVWSSCCMMLHML 285
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 30/153 (19%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
+Q R + LH S +IH D+KP N+L++ + ++ DFGLA++ +++S A
Sbjct: 119 YQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPT 173
Query: 581 GTKG----YVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSFDIEMGEEYA 629
G + YVA+ W+R + + +DV+S G +L E+ R F G +Y
Sbjct: 174 GQQSGMTEYVAT-RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYR 229
Query: 630 ILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 662
F + G + ND++C+E
Sbjct: 230 HQLLLIFG----------IIGTPHSDNDLRCIE 252
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ LV
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V ++ G + S L + G + F A+ +L S
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+++D +++DFG AK + K + GT Y+A PE +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 215
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 435 VIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYK 494
+Q TR KK+ + F + FK E+ ++ H N++RL ++ + LV +
Sbjct: 28 AVQKGTRIRR-AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86
Query: 495 FLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSS-QIIHCDIKPQNIL-LDD 552
G LFE + R + A +I + +L C + H D+KP+N L L D
Sbjct: 87 LCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD 142
Query: 553 YYNA--QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
++ ++ DFGLA K ++ + GT YV SP+ D +S GV++
Sbjct: 143 SPDSPLKLIDFGLAA--RFKPGKMMRTKV-GTPYYV-SPQVL-EGLYGPECDEWSAGVMM 197
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 435 VIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYK 494
+Q TR KK+ + F + FK E+ ++ H N++RL ++ + LV +
Sbjct: 45 AVQKGTRIRR-AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 103
Query: 495 FLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSS-QIIHCDIKPQNIL-LDD 552
G LFE + R + A +I + +L C + H D+KP+N L L D
Sbjct: 104 LCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD 159
Query: 553 YYNA--QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLL 610
++ ++ DFGLA K ++ + GT YV SP+ D +S GV++
Sbjct: 160 SPDSPLKLIDFGLAA--RFKPGKMMRTKV-GTPYYV-SPQVL-EGLYGPECDEWSAGVMM 214
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF 521
+ E+ ++ + H ++++ F D ++ +V + + G L + N + +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN---AQISDFGLAKLLTLNQSKAIKKA 578
Q+ + +LH N IIH D+KP+N+LL +I+DFG +K+L ++ +
Sbjct: 247 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 300
Query: 579 IRGTKGYVASPEWFRNSTITAN--VDVYSFGVLLLEIIS 615
+ GT Y+A T N VD +S GV+L +S
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF 521
+ E+ ++ + H ++++ F D ++ +V + + G L + N + +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN---AQISDFGLAKLLTLNQSKAIKKA 578
Q+ + +LH N IIH D+KP+N+LL +I+DFG +K+L ++ +
Sbjct: 261 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 314
Query: 579 IRGTKGYVASPEWFRNSTITAN--VDVYSFGVLLLEIIS 615
+ GT Y+A T N VD +S GV+L +S
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 353
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF 521
+ E+ ++ + H ++++ F D ++ +V + + G L + N + +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN---AQISDFGLAKLLTLNQSKAIKKA 578
Q+ + +LH N IIH D+KP+N+LL +I+DFG +K+L ++ +
Sbjct: 128 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 181
Query: 579 IRGTKGYVASPEWFRNSTITAN--VDVYSFGVLLLEIISCRKSF 620
+ GT Y+A T N VD +S GV+L +S F
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF 521
+ E+ ++ + H ++++ F D ++ +V + + G L + N + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN---AQISDFGLAKLLTLNQSKAIKKA 578
Q+ + +LH N IIH D+KP+N+LL +I+DFG +K+L ++ +
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 175
Query: 579 IRGTKGYVASPEWFRNSTITAN--VDVYSFGVLLLEIIS 615
+ GT Y+A T N VD +S GV+L +S
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 31/184 (16%)
Query: 473 HKNLVRLLGFC----------DEGQNRLLVYKFLNNGTLASFL--FENLKP-GWNLRANI 519
H N+V+ FC D GQ L+ L G L FL E+ P + I
Sbjct: 85 HPNIVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKI 141
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTL-------NQS 572
+Q R + H+H IIH D+K +N+LL + ++ DFG A ++ Q
Sbjct: 142 FYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQR 200
Query: 573 KAI--KKAIRGTKGYVASPE---WFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEE 627
+A+ ++ R T +PE + N I D+++ G +L + C + E G +
Sbjct: 201 RALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY--LLCFRQHPFEDGAK 258
Query: 628 YAIL 631
I+
Sbjct: 259 LRIV 262
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF 521
+ E+ ++ + H ++++ F D ++ +V + + G L + N + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN---AQISDFGLAKLLTLNQSKAIKKA 578
Q+ + +LH N IIH D+KP+N+LL +I+DFG +K+L ++ +
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 175
Query: 579 IRGTKGYVASPEWFRNSTITAN--VDVYSFGVLLLEIIS 615
+ GT Y+A T N VD +S GV+L +S
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF 521
+ E+ ++ + H ++++ F D ++ +V + + G L + N + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN---AQISDFGLAKLLTLNQSKAIKKA 578
Q+ + +LH N IIH D+KP+N+LL +I+DFG +K+L ++ +
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 175
Query: 579 IRGTKGYVASPEWFRNSTITAN--VDVYSFGVLLLEIIS 615
+ GT Y+A T N VD +S GV+L +S
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 462 KNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF 521
+ E+ ++ + H ++++ F D ++ +V + + G L + N + +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYN---AQISDFGLAKLLTLNQSKAIKKA 578
Q+ + +LH N IIH D+KP+N+LL +I+DFG +K+L ++ +
Sbjct: 121 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 174
Query: 579 IRGTKGYVASPEWFRNSTITAN--VDVYSFGVLLLEIIS 615
+ GT Y+A T N VD +S GV+L +S
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 213
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ L
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLT 105
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V ++ G + S L + G + F A+ +L S
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLD 162
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+++D +++DFG AK + K + GT Y+A PE +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 216
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A PE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ ++ + F
Sbjct: 214 GYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+++D Q++DFG AK + K + GT Y+A PE +
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIIISK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 40/210 (19%)
Query: 444 VIVVKKLDRVFQD--GEKEFKNEVVMIGQTYHKNLVRLLGFCD----EGQNRLLVYKFLN 497
V+ +KK+ RVF+D K E+ ++ + H ++V++L E + L V +
Sbjct: 80 VVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA 139
Query: 498 NGTLASFLFENLKPGWNLRANIA---FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYY 554
+ LF P + +I + + G+ ++H S+ I+H D+KP N L++
Sbjct: 140 DSDFKK-LFRT--PVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDC 193
Query: 555 NAQISDFGLAK----------------------LLTLNQSKAIKKAIRG---TKGYVASP 589
+ ++ DFGLA+ L+T +K +K+ + G T+ Y A
Sbjct: 194 SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPE 253
Query: 590 EWFRNSTITANVDVYSFGVLLLEIISCRKS 619
T +DV+S G + E+++ K
Sbjct: 254 LILLQENYTEAIDVWSIGCIFAELLNMIKE 283
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ L
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLT 105
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V ++ G + S L + G + F A+ +L S
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+++D +++DFG AK + K + GT Y+A PE +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 216
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 491 LVYKFLNNGTLASFL-FENLKPGWNLRANIAFQIARGLLHLHVNC-----SSQIIHCDIK 544
L+ + +G+L FL + L+P LR +A A GL HLHV I H D K
Sbjct: 83 LITHYHEHGSLYDFLQRQTLEPHLALR--LAVSAACGLAHLHVEIFGTQGKPAIAHRDFK 140
Query: 545 PQNILLDDYYNAQISDFGLAKLLTLNQSKA-IKKAIR-GTKGYVASPEWFRNSTIT---- 598
+N+L+ I+D GLA + + I R GTK Y+A PE T
Sbjct: 141 SRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA-PEVLDEQIRTDCFE 199
Query: 599 --ANVDVYSFGVLLLEI 613
D+++FG++L EI
Sbjct: 200 SYKWTDIWAFGLVLWEI 216
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV ++T + ++ K V + NE ++ L
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLT 105
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V ++ G + S L + G + F A+ +L S
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+++D +++DFG AK + K + GT Y+A PE +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 216
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 30/153 (19%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIR 580
+Q R + LH S +IH D+KP N+L++ + ++ DFGLA++ +++S A
Sbjct: 119 YQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPT 173
Query: 581 GTKG----YVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSFDIEMGEEYA 629
G + +VA+ W+R + + +DV+S G +L E+ R F G +Y
Sbjct: 174 GQQSGMVEFVAT-RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYR 229
Query: 630 ILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 662
F + G + ND++C+E
Sbjct: 230 HQLLLIFG----------IIGTPHSDNDLRCIE 252
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 9/203 (4%)
Query: 418 RSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLV 477
R LG+ F LV +T + ++ K V + NE ++ LV
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 478 RLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQ 537
+L + N +V ++ G + S L + G + F A+ +L S
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+I+ D+KP+N+++D +++DFG AK + K + GT Y+A PE +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLA-PEIILSKGY 216
Query: 598 TANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+L+
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVLI 164
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 220
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 221 MLASMIFRKEPF 232
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 28/184 (15%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKN---EVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNN 498
+ V+ +KK+ + +++++ EV + + H N ++ G LV ++
Sbjct: 79 SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137
Query: 499 GTLASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
G+ + L + KP + A + +GL +LH S +IH D+K NILL + +
Sbjct: 138 GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVK 194
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA--------NVDVYSFGVL 609
+ DFG A ++ +V +P W I A VDV+S G+
Sbjct: 195 LGDFGSASIMA------------PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 242
Query: 610 LLEI 613
+E+
Sbjct: 243 CIEL 246
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNC 534
+V L G EG + + L G+L + E + Q GL +LH
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLH--- 183
Query: 535 SSQIIHCDIKPQNILL-DDYYNAQISDFGLAKLLT---LNQSKAIKKAIRGTKGYVASPE 590
S +I+H D+K N+LL D +A + DFG A L L + I GT+ ++A PE
Sbjct: 184 SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMA-PE 242
Query: 591 WFRNSTITANVDVYSFGVLLLEII 614
+ A VDV+S ++L ++
Sbjct: 243 VVLGRSCDAKVDVWSSCCMMLHML 266
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 36/227 (15%)
Query: 464 EVVMIGQTYH--KNLVRLLGFCDEGQNRLLVYKFLNN-GTLASFLFENLKPGWNLRANIA 520
EVV++ + ++RLL + + + +L+ + + L F+ E L +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+Q+ + H H NC ++H DIK +NIL+D + ++ DFG LL +
Sbjct: 121 WQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDF 173
Query: 580 RGTKGYVASPEWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 638
GT+ Y + PEW R + V+S G+LL +++ DI + I+ F
Sbjct: 174 DGTRVY-SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFR 228
Query: 639 YRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
R E + I+ WC+ PS RPT ++
Sbjct: 229 QRVSS---------ECQHLIR----------WCLALRPSDRPTFEEI 256
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 220
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 221 MLASMIFRKEPF 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 220
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 221 MLASMIFRKEPF 232
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 459 KEFKNEVVMIGQTYHKNLVRL----LGFCDEGQNRLLVYKFLNNGTLASFLFEN---LKP 511
K E+ ++ +H N++ L + F + ++L + L LA + + + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 512 GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQ 571
+I + + LL LHV + ++H D+ P NILL D + I DF LA+ T +
Sbjct: 134 -----QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD- 187
Query: 572 SKAIKKAIRGTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF 620
K + + W+R + T VD++S G ++ E+ + + F
Sbjct: 188 ---------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 220
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 221 MLASMIFRKEPF 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 116 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 169
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 170 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 225
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 226 MLASMIFRKEPF 237
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 459 KEFKNEVVMIGQTYHKNLVRL----LGFCDEGQNRLLVYKFLNNGTLASFLFEN---LKP 511
K E+ ++ +H N++ L + F + ++L + L LA + + + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 512 GWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQ 571
+I + + LL LHV + ++H D+ P NILL D + I DF LA+ T +
Sbjct: 134 -----QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD- 187
Query: 572 SKAIKKAIRGTKGYVASPEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF 620
K + + W+R + T VD++S G ++ E+ + + F
Sbjct: 188 ---------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT Y+A P +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA-PAIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 110 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 163
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 164 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 219
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 220 MLASMIFRKEPF 231
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 110 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 163
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 164 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 219
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 220 MLASMIFRKEPF 231
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 220
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 221 MLASMIFRKEPF 232
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 28/184 (15%)
Query: 442 TTVIVVKKLDRVFQDGEKEFKN---EVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNN 498
+ V+ +KK+ + +++++ EV + + H N ++ G LV ++
Sbjct: 40 SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 98
Query: 499 GTLASFLFENLKPGWNLR-ANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQ 557
G+ + L + KP + A + +GL +LH S +IH D+K NILL + +
Sbjct: 99 GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVK 155
Query: 558 ISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA--------NVDVYSFGVL 609
+ DFG A ++ +V +P W I A VDV+S G+
Sbjct: 156 LGDFGSASIMA------------PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203
Query: 610 LLEI 613
+E+
Sbjct: 204 CIEL 207
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 220
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 221 MLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 220
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 221 MLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 220
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 221 MLASMIFRKEPF 232
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 14/118 (11%)
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL------DDYYNAQISDFGLAKLLTLNQ 571
I+ Q+ GL ++H C IIH DIKP+N+L+ ++ +I+D G A +
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 572 SKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYA 629
+ +I+ T+ Y SPE + D++S L+ E+I+ F+ + G Y
Sbjct: 193 TNSIQ-----TREY-RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT 244
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 109 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 162
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 163 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 218
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 219 MLASMIFRKEPF 230
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 220
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 221 MLASMIFRKEPF 232
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 14/118 (11%)
Query: 518 NIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL------DDYYNAQISDFGLAKLLTLNQ 571
I+ Q+ GL ++H C IIH DIKP+N+L+ ++ +I+D G A +
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 572 SKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYA 629
+ +I+ T+ Y SPE + D++S L+ E+I+ F+ + G Y
Sbjct: 193 TNSIQ-----TREY-RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT 244
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)
Query: 429 NFTLVGVIQTSTRTTVIVVKKLDRVFQDGEK---EFKNEVVMIGQTYHKNLVRLLGFCDE 485
NF + +++ ++ VK ++R GEK K E++ H N+VR
Sbjct: 31 NFGVARLMRDKQANELVAVKYIER----GEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 486 GQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF----QIARGLLHLHVNCSSQIIHC 541
+ +V ++ + G L FE + + A Q+ G+ + H + Q+ H
Sbjct: 87 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYAH---AMQVAHR 139
Query: 542 DIKPQNILLD--DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA 599
D+K +N LLD +I+DFG +K L+ K+ GT Y+A +
Sbjct: 140 DLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAVGTPAYIAPEVLLKKEYDGK 196
Query: 600 NVDVYSFGVLL 610
DV+S GV L
Sbjct: 197 VADVWSCGVTL 207
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 520 AFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAI 579
A QI +LH S +I+ D+KP+N+L+D +++DFG AK + K +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXL 199
Query: 580 RGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSF 620
GT Y+A PE + VD ++ GVL+ E+ + F
Sbjct: 200 CGTPEYLA-PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 26/151 (17%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLL---------TLNQ 571
+Q R + LH S +IH D+KP N+L++ + ++ DFGLA+++ Q
Sbjct: 119 YQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 572 SKAIKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 631
+ + + T+ Y A ++ + +DV+S G +L E+ R F G +Y
Sbjct: 176 QSGMTEXV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYRHQ 231
Query: 632 TDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 662
F + G + ND++C+E
Sbjct: 232 LLLIFG----------IIGTPHSDNDLRCIE 252
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 34/217 (15%)
Query: 430 FTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFC--DEG- 486
F+ V +++ +K++ Q +E + E M H N++RL+ +C + G
Sbjct: 42 FSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA 101
Query: 487 -QNRLLVYKFLNNGTLASFLFENLKPGWNLRAN-----IAFQIARGLLHLHVNCSSQIIH 540
L+ F GTL + + E LK N + I RGL +H + H
Sbjct: 102 KHEAWLLLPFFKRGTLWNEI-ERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA---H 157
Query: 541 CDIKPQNILLDDYYNAQISDFGLAKLLTLNQS----KAIKKAI--------RGTKGYVAS 588
D+KP NILL D + D G ++NQ+ + ++A+ R T Y A
Sbjct: 158 RDLKPTNILLGDEGQPVLMDLG-----SMNQACIHVEGSRQALTLQDWAAQRCTISYRA- 211
Query: 589 PEWF---RNSTITANVDVYSFGVLLLEIISCRKSFDI 622
PE F + I DV+S G +L ++ +D+
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 117/280 (41%), Gaps = 43/280 (15%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVK--KLDRVFQDGEKEFKNEVVMIGQTYHKNLVR 478
+LG F + + Q + VK K D + +EF E + + H ++ +
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 479 LLGFCDEGQNR------LLVYKFLNNGTLASFLFENLKPGWN-----LRANIAFQ--IAR 525
L+G + + +++ F+ +G L +FL + + G N L+ + F IA
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLAS-RIGENPFNLPLQTLVRFMVDIAC 148
Query: 526 GLLHLHVNCSSQIIHCDIKPQNILLDDYYNAQISDFGLAKLL----TLNQSKAIKKAIRG 581
G+ +L S IH D+ +N +L + ++DFGL++ + Q A K ++
Sbjct: 149 GMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKW 205
Query: 582 TKGYVASPEWFRNSTITANVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 641
+ E ++ T + DV++FGV + EI++ ++ + N
Sbjct: 206 L-----ALESLADNLYTVHSDVWAFGVTMWEIMTRGQT---------------PYAGIEN 245
Query: 642 GKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPT 681
++ + + G +C+E++ + C DP RP+
Sbjct: 246 AEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPS 285
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++ +NN L++ L +++R + ++I + L + H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 551 D-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 220
Query: 609 LLLEIISCRKSF 620
+L +I ++ F
Sbjct: 221 MLASMIFRKEPF 232
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 50 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 108
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 109 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 165
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 166 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 217
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS----- 268
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 269 ----ECQHLIR----------WCLALRPSDRPTFEEI 291
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 16 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 75 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 132 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 183
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS----- 234
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 235 ----ECQHLIR----------WCLALRPSDRPTFEEI 257
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 538 IIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI 597
+IH D+KP NILLD+ ++ DFG++ L +++ K G Y+A PE
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA---KDRSAGCAAYMA-PERIDPPDP 201
Query: 598 TA-----NVDVYSFGVLLLEIIS-------CRKSFDI 622
T DV+S G+ L+E+ + C+ F++
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 30 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 88
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 89 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 145
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 146 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 197
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS----- 248
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 249 ----ECQHLIR----------WCLALRPSDRPTFEEI 271
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 31 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 89
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 90 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 147 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 198
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVS------ 248
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 249 ---XECQHLIR----------WCLALRPSDRPTFEEI 272
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCS 535
LV+L + N +V +++ G + S L + G + F A+ +L S
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 536 SQIIHCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNS 595
+I+ D+KP+N+L+D Q++DFG AK + K + GT +A PE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALA-PEIILSK 213
Query: 596 TITANVDVYSFGVLLLEIISCRKSF 620
VD ++ GVL+ E+ + F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQ 522
E+V +V L G EG + + L G+L + + + Q
Sbjct: 99 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ 158
Query: 523 IARGLLHLHVNCSSQIIHCDIKPQNILL-DDYYNAQISDFGLAKLLT---LNQSKAIKKA 578
GL +LH + +I+H D+K N+LL D A + DFG A L L +S
Sbjct: 159 ALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
I GT+ ++A PE A VD++S ++L ++
Sbjct: 216 IPGTETHMA-PEVVMGKPCDAKVDIWSSCCMMLHML 250
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 31 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 89
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 90 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 147 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 198
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS----- 249
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 250 ----ECQHLIR----------WCLALRPSDRPTFEEI 272
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 42/230 (18%)
Query: 464 EVVMIGQTYH--KNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA- 520
EVV++ + ++RLL + + + +L+ L LF+ + L+ +A
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 118
Query: 521 ---FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIK 576
+Q+ + H H NC ++H DIK +NIL+D + ++ DFG LL +
Sbjct: 119 SFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVY 171
Query: 577 KAIRGTKGYVASPEWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 635
GT+ Y + PEW R + V+S G+LL +++ DI + I+
Sbjct: 172 TDFDGTRVY-SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 226
Query: 636 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
F R E + I+ WC+ PS RPT ++
Sbjct: 227 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEI 257
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 42/230 (18%)
Query: 464 EVVMIGQTYH--KNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA- 520
EVV++ + ++RLL + + + +L+ L LF+ + L+ +A
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 117
Query: 521 ---FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIK 576
+Q+ + H H NC ++H DIK +NIL+D + ++ DFG LL +
Sbjct: 118 SFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVY 170
Query: 577 KAIRGTKGYVASPEWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 635
GT+ Y + PEW R + V+S G+LL +++ DI + I+
Sbjct: 171 TDFDGTRVY-SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 225
Query: 636 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
F R E + I+ WC+ PS RPT ++
Sbjct: 226 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEI 256
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 30 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 88
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 89 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 145
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 146 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 197
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVS------ 247
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 248 ---XECQHLIR----------WCLALRPSDRPTFEEI 271
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 58 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 116
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 117 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 173
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 174 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 225
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS----- 276
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 277 ----ECQHLIR----------WCLALRPSDRPTFEEI 299
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQ 522
E+V +V L G EG + + L G+L + + + Q
Sbjct: 113 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ 172
Query: 523 IARGLLHLHVNCSSQIIHCDIKPQNILL-DDYYNAQISDFGLAKLLT---LNQSKAIKKA 578
GL +LH + +I+H D+K N+LL D A + DFG A L L +S
Sbjct: 173 ALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
Query: 579 IRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
I GT+ ++A PE A VD++S ++L ++
Sbjct: 230 IPGTETHMA-PEVVMGKPCDAKVDIWSSCCMMLHML 264
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 514 NLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQS 572
L + +Q+ + H H NC ++H DIK +NIL+D + ++ DFG LL
Sbjct: 137 ELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----K 189
Query: 573 KAIKKAIRGTKGYVASPEWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 631
+ GT+ Y + PEW R + V+S G+LL +++ DI + I+
Sbjct: 190 DTVYTDFDGTRVY-SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEII 244
Query: 632 TDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVS 686
F R E + I+ WC+ PS RPT ++
Sbjct: 245 RGQVFFRQRVS---------XECQHLIR----------WCLALRPSDRPTFEEIQ 280
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 23/191 (12%)
Query: 429 NFTLVGVIQTSTRTTVIVVKKLDRVFQDGEK---EFKNEVVMIGQTYHKNLVRLLGFCDE 485
NF + +++ ++ VK ++R GEK K E++ H N+VR
Sbjct: 31 NFGVARLMRDKQSNELVAVKYIER----GEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 486 GQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF----QIARGLLHLHVNCSSQIIHC 541
+ +V ++ + G L FE + + A Q+ G+ + H + Q+ H
Sbjct: 87 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYCH---AMQVCHR 139
Query: 542 DIKPQNILLD--DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA 599
D+K +N LLD +I DFG +K L+ K+ GT Y+A +
Sbjct: 140 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 600 NVDVYSFGVLL 610
DV+S GV L
Sbjct: 197 VADVWSCGVTL 207
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 42/230 (18%)
Query: 464 EVVMIGQTYH--KNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA- 520
EVV++ + ++RLL + + + +L+ L LF+ + L+ +A
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 118
Query: 521 ---FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIK 576
+Q+ + H H NC ++H DIK +NIL+D + ++ DFG LL +
Sbjct: 119 SFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVY 171
Query: 577 KAIRGTKGYVASPEWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 635
GT+ Y + PEW R + V+S G+LL +++ DI + I+
Sbjct: 172 TDFDGTRVY-SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 226
Query: 636 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
F R E + I+ WC+ PS RPT ++
Sbjct: 227 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEI 257
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 464 EVVMIGQTYH--KNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA- 520
EVV++ + ++RLL + + + +L+ L LF+ + L+ +A
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 113
Query: 521 ---FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIK 576
+Q+ + H H NC ++H DIK +NIL+D + ++ DFG LL +
Sbjct: 114 SFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVY 166
Query: 577 KAIRGTKGYVASPEWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 635
GT+ Y + PEW R + V+S G+LL +++ DI + I+
Sbjct: 167 TDFDGTRVY-SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 221
Query: 636 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVS 686
F R E + I+ WC+ PS RPT ++
Sbjct: 222 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQ 253
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 43 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 102 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 159 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 210
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS----- 261
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 262 ----ECQHLIR----------WCLALRPSDRPTFEEI 284
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 463 NEVVMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF- 521
E+V +V L G EG + + L G+L + K L + A
Sbjct: 115 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALY 170
Query: 522 ---QIARGLLHLHVNCSSQIIHCDIKPQNILL-DDYYNAQISDFGLAKLLT---LNQSKA 574
Q GL +LH + +I+H D+K N+LL D A + DFG A L L +S
Sbjct: 171 YLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 227
Query: 575 IKKAIRGTKGYVASPEWFRNSTITANVDVYSFGVLLLEII 614
I GT+ ++A PE A VD++S ++L ++
Sbjct: 228 TGDYIPGTETHMA-PEVVMGKPCDAKVDIWSSCCMMLHML 266
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 63 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 121
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 122 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 178
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 179 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 230
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVS------ 280
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 281 ---XECQHLIR----------WCLALRPSDRPTFEEI 304
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 44 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 103 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 160 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 211
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSS----- 262
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 263 ----ECQHLIR----------WCLALRPSDRPTFEEI 285
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 473 HKNLVRLLGFCDEGQNRLLVY-KFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLH 531
H ++RLL + + + +LV + L L ++ E G Q+ + H H
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH 156
Query: 532 VNCSSQIIHCDIKPQNILLDDYYN-AQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPE 590
S ++H DIK +NIL+D A++ DFG LL GT+ Y + PE
Sbjct: 157 ---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL----HDEPYTDFDGTRVY-SPPE 208
Query: 591 WF-RNSTITANVDVYSFGVLLLEIISCRKSFD 621
W R+ V+S G+LL +++ F+
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 476 LVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHLH 531
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H H
Sbjct: 74 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 532 VNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPE 590
NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + PE
Sbjct: 131 -NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPPE 182
Query: 591 WFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVE 649
W R + V+S G+LL +++ DI + I+ F R
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS------ 232
Query: 650 GDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVS 686
E + I+ WC+ PS RPT ++
Sbjct: 233 ---ECQHLIR----------WCLALRPSDRPTFEEIQ 256
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 58 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 116
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 117 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 173
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 174 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 225
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVS------ 275
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 276 ---XECQHLIR----------WCLALRPSDRPTFEEI 299
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 464 EVVMIGQTYH--KNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA- 520
EVV++ + ++RLL + + + +L+ L LF+ + L+ +A
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 113
Query: 521 ---FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIK 576
+Q+ + H H NC ++H DIK +NIL+D + ++ DFG LL +
Sbjct: 114 SFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVY 166
Query: 577 KAIRGTKGYVASPEWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 635
GT+ Y + PEW R + V+S G+LL +++ DI + I+
Sbjct: 167 TDFDGTRVY-SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQV 221
Query: 636 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKVS 686
F R E + I+ WC+ PS RPT ++
Sbjct: 222 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQ 253
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 23/191 (12%)
Query: 429 NFTLVGVIQTSTRTTVIVVKKLDRVFQDGEK---EFKNEVVMIGQTYHKNLVRLLGFCDE 485
NF + +++ ++ VK ++R GEK K E++ H N+VR
Sbjct: 30 NFGVARLMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 486 GQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAF----QIARGLLHLHVNCSSQIIHC 541
+ +V ++ + G L FE + + A Q+ G+ + H + Q+ H
Sbjct: 86 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYCH---AMQVCHR 138
Query: 542 DIKPQNILLD--DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTITA 599
D+K +N LLD +I DFG +K L+ K+ GT Y+A +
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLKKEYDGK 195
Query: 600 NVDVYSFGVLL 610
DV+S GV L
Sbjct: 196 VADVWSCGVTL 206
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 44 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 103 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 160 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 211
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSS----- 262
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 263 ----ECQHLIR----------WCLALRPSDRPTFEEI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 43 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 102 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 159 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 210
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSS----- 261
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 262 ----ECQHLIR----------WCLALRPSDRPTFEEI 284
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 43 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 102 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 159 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 210
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSS----- 261
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 262 ----ECQHLIR----------WCLALRPSDRPTFEEI 284
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 515 LRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL--DDYYNAQISDFGLAK-LLTLNQ 571
L +NI QI L +LH + I H DIKP+N L + + ++ DFGL+K LN
Sbjct: 169 LISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN 225
Query: 572 SKAIKKAIRGTKGYVASPEWFR--NSTITANVDVYSFGVLL 610
+ + Y +PE N + D +S GVLL
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 466 VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA----NIAF 521
++GQ H ++VR E + L+ ++ N G+LA + EN + + ++
Sbjct: 65 AVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 122
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILL 550
Q+ RGL ++H S ++H DIKP NI +
Sbjct: 123 QVGRGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 466 VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA----NIAF 521
++GQ H ++VR E + L+ ++ N G+LA + EN + + ++
Sbjct: 63 AVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILL 550
Q+ RGL ++H S ++H DIKP NI +
Sbjct: 121 QVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 44 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 103 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 160 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 211
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVS------ 261
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 262 ---XECQHLIR----------WCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 43 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 102 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 159 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 210
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVS------ 260
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 261 ---XECQHLIR----------WCLALRPSDRPTFEEI 284
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGE----KEFKNEVVMIGQTYH--K 474
LLGS F + G+ + I + DR+ GE EVV++ +
Sbjct: 44 LLGSGGFGS-VYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 475 NLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA----FQIARGLLHL 530
++RLL + + + +L+ L LF+ + L+ +A +Q+ + H
Sbjct: 103 GVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 531 HVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASP 589
H NC ++H DIK +NIL+D + ++ DFG LL + GT+ Y + P
Sbjct: 160 H-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY-SPP 211
Query: 590 EWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 648
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVS------ 261
Query: 649 EGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
E + I+ WC+ PS RPT ++
Sbjct: 262 ---XECQHLIR----------WCLALRPSDRPTFEEI 285
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 42/230 (18%)
Query: 464 EVVMIGQTYH--KNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA- 520
EVV++ + ++RLL + + + +L+ L LF+ + L+ +A
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 160
Query: 521 ---FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIK 576
+Q+ + H H NC ++H DIK +NIL+D + ++ DFG LL +
Sbjct: 161 SFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVY 213
Query: 577 KAIRGTKGYVASPEWFRNSTITA-NVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 635
GT+ Y + PEW R + V+S G+LL +++ DI + I+
Sbjct: 214 TDFDGTRVY-SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 268
Query: 636 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLVMVSIWCIQEDPSLRPTMRKV 685
F R E + I+ WC+ PS RPT ++
Sbjct: 269 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEI 299
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 466 VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA----NIAF 521
++GQ H ++VR E + L+ ++ N G+LA + EN + + ++
Sbjct: 63 AVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILL 550
Q+ RGL ++H S ++H DIKP NI +
Sbjct: 121 QVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 466 VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRA----NIAF 521
++GQ H ++VR E + L+ ++ N G+LA + EN + + ++
Sbjct: 61 AVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 118
Query: 522 QIARGLLHLHVNCSSQIIHCDIKPQNILL 550
Q+ RGL ++H S ++H DIKP NI +
Sbjct: 119 QVGRGLRYIH---SMSLVHMDIKPSNIFI 144
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 500 TLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILLDDYYNA-QI 558
L SF+ NL + +Q+ R + +H S I H DIKPQN+L++ N ++
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKL 183
Query: 559 SDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNST-ITANVDVYSFGVLLLEIISCR 617
DFG AK L ++ R + +PE +T T ++D++S G + E+I +
Sbjct: 184 CDFGSAKKLIPSEPSVAXICSR----FYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
Query: 618 KSFDIE 623
F E
Sbjct: 240 PLFSGE 245
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 435 VIQTSTRTTVIVVK-KLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLLGFCDEGQNRLLVY 493
I T T TV + + +L+ + EV ++ + H+N++ L L++
Sbjct: 53 AIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112
Query: 494 KFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL--- 550
++ N L ++ +N + + +Q+ G+ H S + +H D+KPQN+LL
Sbjct: 113 EYAEND-LKKYMDKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVS 168
Query: 551 --DDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-------TANV 601
+ +I DFGLA+ + + + I W+R I + +V
Sbjct: 169 DASETPVLKIGDFGLARAFGIPIRQFTHEIIT---------LWYRPPEILLGSRHYSTSV 219
Query: 602 DVYSFGVLLLEII 614
D++S + E++
Sbjct: 220 DIWSIACIWAEML 232
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 12/199 (6%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
++G F LV + + ++ K + + + F E ++ +V+L
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA-FQIARGLLHLHVNCSSQII 539
+ + +V +++ G L NL +++ A F A +L L S +I
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLV-----NLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLI 196
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFR----NS 595
H D+KP N+LLD + + +++DFG + A+ GT Y+ SPE + +
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYI-SPEVLKSQGGDG 254
Query: 596 TITANVDVYSFGVLLLEII 614
D +S GV L E++
Sbjct: 255 YYGRECDWWSVGVFLFEML 273
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
++G F LV T + ++ K + + + F E ++ +V+L
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA-FQIARGLLHLHVNCSSQII 539
+ + +V +++ G L NL +++ A F A +L L S I
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 190
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK-KAIRGTKGYVASPEWFR----N 594
H D+KP N+LLD + +++DFG + +N+ ++ GT Y+ SPE + +
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYI-SPEVLKSQGGD 247
Query: 595 STITANVDVYSFGVLLLEII 614
D +S GV L E++
Sbjct: 248 GYYGRECDWWSVGVFLYEML 267
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++++NN L++ L +++R + +++ + L + H S I+H D+KP N+++
Sbjct: 112 LVFEYINNTDFKQ-LYQILT-DFDIRFYM-YELLKALDYCH---SKGIMHRDVKPHNVMI 165
Query: 551 DDYYNA-QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 166 DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 221
Query: 609 LLLEIISCRKSF 620
+L +I R+ F
Sbjct: 222 MLASMIFRREPF 233
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAI 579
++I + L + H S I+H D+KP N+++D ++ ++ D+GLA+ Q ++ A
Sbjct: 138 YEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 580 RGTKGYVASPEWFRNSTI-TANVDVYSFGVLLLEIISCRKSF 620
R KG PE + + ++D++S G +L +I ++ F
Sbjct: 195 RYFKG----PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 411 RNMMNVTRSVLLGSSVFVNFTLVGVIQTSTRTTVIVVKK-----LDRVFQDGEKEFKNEV 465
+M +T S LLG + +Q V +++K RVF++ E ++ +
Sbjct: 11 EDMYKLT-SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ- 68
Query: 466 VMIGQTYHKNLVRLLGFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIAFQIAR 525
+KN++ L+ F ++ LV++ L G++ + + + + + +A
Sbjct: 69 ------GNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAA 122
Query: 526 GLLHLHVNCSSQIIHCDIKPQNILLDDYYN---AQISDFGLAKLLTLNQSKAIKKAIR-- 580
L LH + I H D+KP+NIL + +I DF L + LN S
Sbjct: 123 ALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 581 ---GTKGYVASPEWFRNSTITAN-----VDVYSFGVLLLEIIS 615
G+ Y+A PE T A D++S GV+L ++S
Sbjct: 180 TPCGSAEYMA-PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLS 221
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 491 LVYKFLNNGTLASFLFENLKPGWNLRANIAFQIARGLLHLHVNCSSQIIHCDIKPQNILL 550
LV++++NN L++ L +++R + +++ + L + H S I+H D+KP N+++
Sbjct: 117 LVFEYINNTDFKQ-LYQILT-DFDIRFYM-YELLKALDYCH---SKGIMHRDVKPHNVMI 170
Query: 551 DDYYNA-QISDFGLAKLLTLNQSKAIKKAIRGTKGYVASPEWFRNSTI-TANVDVYSFGV 608
D ++ D+GLA+ Q ++ A R KG PE + + ++D++S G
Sbjct: 171 DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG----PELLVDYQMYDYSLDMWSLGC 226
Query: 609 LLLEIISCRKSF 620
+L +I R+ F
Sbjct: 227 MLASMIFRREPF 238
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
++G F LV T + ++ K + + + F E ++ +V+L
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA-FQIARGLLHLHVNCSSQII 539
+ + +V +++ G L NL +++ A F A +L L S I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK-KAIRGTKGYVASPEWFR----N 594
H D+KP N+LLD + +++DFG + +N+ ++ GT Y+ SPE + +
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYI-SPEVLKSQGGD 252
Query: 595 STITANVDVYSFGVLLLEII 614
D +S GV L E++
Sbjct: 253 GYYGRECDWWSVGVFLYEML 272
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 60/111 (54%), Gaps = 23/111 (20%)
Query: 521 FQIARGLLHLHVNCSSQIIHCDIKPQNILLD-DYYNAQISDFGLAKLLTLNQSKAIKKAI 579
+Q+ RGL ++H S+ ++H D+KP N+ ++ + +I DFGLA+++ + S
Sbjct: 127 YQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH------ 177
Query: 580 RGTKGYVAS---PEWFRNSTI-------TANVDVYSFGVLLLEIISCRKSF 620
KG+++ +W+R+ + T +D+++ G + E+++ + F
Sbjct: 178 ---KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 421 LLGSSVFVNFTLVGVIQTSTRTTVIVVKKLDRVFQDGEKEFKNEVVMIGQTYHKNLVRLL 480
++G F LV T + ++ K + + + F E ++ +V+L
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 481 GFCDEGQNRLLVYKFLNNGTLASFLFENLKPGWNLRANIA-FQIARGLLHLHVNCSSQII 539
+ + +V +++ G L NL +++ A F A +L L S I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 540 HCDIKPQNILLDDYYNAQISDFGLAKLLTLNQSKAIK-KAIRGTKGYVASPEWFR----N 594
H D+KP N+LLD + +++DFG + +N+ ++ GT Y+ SPE + +
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYI-SPEVLKSQGGD 252
Query: 595 STITANVDVYSFGVLLLEII 614
D +S GV L E++
Sbjct: 253 GYYGRECDWWSVGVFLYEML 272
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,561,228
Number of Sequences: 62578
Number of extensions: 890985
Number of successful extensions: 4301
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 297
Number of HSP's that attempted gapping in prelim test: 2344
Number of HSP's gapped (non-prelim): 1269
length of query: 709
length of database: 14,973,337
effective HSP length: 106
effective length of query: 603
effective length of database: 8,340,069
effective search space: 5029061607
effective search space used: 5029061607
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)