BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038912
MFRTRSIFSLPDELLSEILARVGACSLDDLLNAGLSCKLFNEITFDKYVLRQASIEKIPA
MPWHKNYSFLEKCRDSGNPEALYKQGVVEFFSYSNLEAGVAYLDIATKSGHLGASYILGV
IFLCKDDEDDDNESNQKGMQHLDKVYRAKRLSQCRNKLQSITQTLWKNYYLKPKLNKCPS
RKNHGLKVGWPCEVDDIEL

High Scoring Gene Products

Symbol, full name Information P value
AT1G67623 protein from Arabidopsis thaliana 1.7e-20
AT1G74875 protein from Arabidopsis thaliana 6.9e-15
AT2G35280 protein from Arabidopsis thaliana 1.9e-12
AT1G67340 protein from Arabidopsis thaliana 3.8e-10
AT3G30430 protein from Arabidopsis thaliana 5.2e-10
AT5G50450 protein from Arabidopsis thaliana 3.3e-06
AT1G14800 protein from Arabidopsis thaliana 0.00098

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038912
        (199 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2824055 - symbol:AT1G67623 "AT1G67623" species...   242  1.7e-20   1
TAIR|locus:5019474674 - symbol:AT1G74875 "AT1G74875" spec...   189  6.9e-15   1
TAIR|locus:2063454 - symbol:AT2G35280 "AT2G35280" species...   166  1.9e-12   1
TAIR|locus:2019604 - symbol:AT1G67340 "AT1G67340" species...   151  3.8e-10   1
TAIR|locus:2093325 - symbol:AT3G30430 "AT3G30430" species...   143  5.2e-10   1
TAIR|locus:2177522 - symbol:AT5G50450 species:3702 "Arabi...   127  3.3e-06   1
TAIR|locus:2006847 - symbol:AT1G14800 "AT1G14800" species...   108  0.00098   1


>TAIR|locus:2824055 [details] [associations]
            symbol:AT1G67623 "AT1G67623" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
            SMART:SM00256 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC008113
            IPI:IPI00537982 PIR:F96699 RefSeq:NP_176929.1 UniGene:At.52422
            ProteinModelPortal:Q9FXC7 EnsemblPlants:AT1G67623.1 GeneID:843084
            KEGG:ath:AT1G67623 TAIR:At1g67623 eggNOG:NOG240091
            HOGENOM:HOG000112525 InParanoid:Q9FXC7 OMA:SFRRICD PhylomeDB:Q9FXC7
            ProtClustDB:CLSN2682004 Genevestigator:Q9FXC7 Uniprot:Q9FXC7
        Length = 296

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 58/165 (35%), Positives = 89/165 (53%)

Query:     9 SLPDELLSEILARVGACSLDDLLNAGLSCKLFNEITFDKYVLRQASIEKIPAMPWHKNYS 68
             SLP++LL EI +  GA SL  + N  L  K F  I  +KYV  + S+++I  +PWH+N +
Sbjct:    26 SLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHENSA 85

Query:    69 -FLEKCRDSGNPEALYKQGVVEFFSYSNLEAGVAYLDIATKSGHLGASYILGVIFLCKDD 127
              F+E+C +S NPEAL+++G + +F     + G+ YL  A + G   A Y+ GVI +C   
Sbjct:    86 KFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVILICLG- 144

Query:   128 EDDDNESNQKGMQHLDKVYRA------KRLSQCRNKLQSITQTLW 166
                  ++ QKG + L  V +         L + R K+Q I    W
Sbjct:   145 ----GKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFW 185


>TAIR|locus:5019474674 [details] [associations]
            symbol:AT1G74875 "AT1G74875" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 IPI:IPI00938606 RefSeq:NP_001154471.1
            UniGene:At.74467 ProteinModelPortal:F4HXC5 SMR:F4HXC5
            EnsemblPlants:AT1G74875.1 GeneID:7922311 KEGG:ath:AT1G74875
            OMA:SACEICL Uniprot:F4HXC5
        Length = 243

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 49/177 (27%), Positives = 89/177 (50%)

Query:    18 ILARVGACSLDDLLNAGLSCKLFNEITFDKYVLRQASIEKIPAMPWH---KNYSFLEKCR 74
             ++  V + SL +  N  L  K F  I+ D+Y+L++ S+ KIP +PW    K ++F ++CR
Sbjct:    23 LVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPLLPWRNRKKFHNFFKRCR 82

Query:    75 DSGNPEALYKQGVVEFFSYSNLEA----GVAYLDIATKSGHLGASYILGVIFLCKDDEDD 130
              SGN EA+Y++G+V++F   + E     G+ ++     +G+  A Y+ G+I +C      
Sbjct:    83 KSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLILICLG---- 138

Query:   131 DNESNQKGMQHLDKVYRAKRLSQCRNKLQS----ITQTLWKNYYLKPKLNKCPSRKN 183
               ++ Q G + L  + +   LS    +++     I    W    +   L K   R+N
Sbjct:   139 -GKTKQNGFKILSSLRKPLMLSNTIKEMEKHRTHIRNMWWWGEPMMRHLQKSYVREN 194


>TAIR|locus:2063454 [details] [associations]
            symbol:AT2G35280 "AT2G35280" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] PROSITE:PS50181 EMBL:CP002685 EMBL:AC004667
            EMBL:DQ446599 EMBL:AY500336 IPI:IPI00538416 PIR:F84766
            RefSeq:NP_850243.1 UniGene:At.49286 ProteinModelPortal:Q1PEW8
            SMR:Q1PEW8 EnsemblPlants:AT2G35280.1 GeneID:818095
            KEGG:ath:AT2G35280 TAIR:At2g35280 eggNOG:NOG281700 OMA:WIDEEEC
            PhylomeDB:Q1PEW8 ProtClustDB:CLSN2684668 Genevestigator:Q1PEW8
            Uniprot:Q1PEW8
        Length = 163

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 35/119 (29%), Positives = 65/119 (54%)

Query:     9 SLPDELLSEILARVGACSLDDLLNAGLSCKLFNEITFDKYVLRQASIEKIPAMPW--HKN 66
             +LP +LL EI+A++G  S +D  N  LSCK       D+ VL+  ++  +   P    K+
Sbjct:    13 ALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPLSCRKH 72

Query:    67 YSFLEKCRDSGNPEALYKQGVVEFFSYSNLEAGVAYLDIATKSGHLGASYILGVIFLCK 125
                ++KC  + NP+A Y +G++ +F+  + +  + ++ IA   G   A Y+  ++ LC+
Sbjct:    73 LLIMKKCLANNNPDAHYIKGIIWYFNLDHCDVDLHHIGIAANGGQKEAIYMYAMLLLCR 131


>TAIR|locus:2019604 [details] [associations]
            symbol:AT1G67340 "AT1G67340" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR002893 InterPro:IPR011990 Pfam:PF01753
            PROSITE:PS50181 UniPathway:UPA00143 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0008270 GO:GO:0016567
            Gene3D:1.25.40.10 InterPro:IPR006597 Pfam:PF08238 EMBL:AC002130
            eggNOG:NOG317292 HOGENOM:HOG000238617 ProtClustDB:CLSN2687031
            EMBL:AY057623 EMBL:AY093102 EMBL:BT000146 IPI:IPI00541988
            PIR:H96696 RefSeq:NP_564894.1 UniGene:At.25264
            ProteinModelPortal:Q9FYF9 SMR:Q9FYF9 IntAct:Q9FYF9 STRING:Q9FYF9
            PaxDb:Q9FYF9 PRIDE:Q9FYF9 EnsemblPlants:AT1G67340.1 GeneID:843055
            KEGG:ath:AT1G67340 TAIR:At1g67340 InParanoid:Q9FYF9 OMA:LCADAGN
            PhylomeDB:Q9FYF9 Genevestigator:Q9FYF9 Uniprot:Q9FYF9
        Length = 379

 Score = 151 (58.2 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 39/118 (33%), Positives = 63/118 (53%)

Query:     9 SLPDELLSEILARVGACSL--DDLLNAGLSCKLFNEITFDKYVLRQASIEKIP--AMPWH 64
             S+PD+L+  IL ++G+ S    D +N  L+CK    +  +  VL + S + I   A  W 
Sbjct:    46 SIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKAHNWS 105

Query:    65 K-NYSFLEKCRDSGNPEALYKQGVVEFFSYSNLEAGVAYLDIATKSGHLGASYILGVI 121
             + ++ FL++C D+G+ EA Y  G++ F+   N   G + +  A  S H  A Y L VI
Sbjct:   106 EYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLAVI 163


>TAIR|locus:2093325 [details] [associations]
            symbol:AT3G30430 "AT3G30430" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR
            ProtClustDB:CLSN2684668 EMBL:BT029251 IPI:IPI00532301
            RefSeq:NP_189663.1 UniGene:At.50995 DNASU:822752
            EnsemblPlants:AT3G30430.1 GeneID:822752 KEGG:ath:AT3G30430
            TAIR:At3g30430 HOGENOM:HOG000201001 PhylomeDB:Q058G7
            Genevestigator:Q058G7 Uniprot:Q058G7
        Length = 114

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 31/99 (31%), Positives = 56/99 (56%)

Query:    10 LPDELLSEILARVGACSLDDLLNAGLSCKLFNEITFDKYVLRQASIEKIPAMPW--HKNY 67
             LP +LL EI+A++GA   +D  N  LSCK       D+ VL+  ++  +   P    K+ 
Sbjct:    14 LPQDLLGEIVAKIGAKYAEDYHNCILSCKELGASANDERVLKTLNLAPLVKKPLSCRKHL 73

Query:    68 SFLEKCRDSGNPEALYKQGVVEFFSYSNLEAGVAYLDIA 106
               ++KC  + NP+A Y +G++ +F+  + + G+ ++ IA
Sbjct:    74 LIMKKCLANNNPDAHYIKGIIWYFNLDHCDVGLHHIGIA 112


>TAIR|locus:2177522 [details] [associations]
            symbol:AT5G50450 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR002893 InterPro:IPR011990 Pfam:PF01753
            PROSITE:PS01360 PROSITE:PS50181 PROSITE:PS50865 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
            Gene3D:1.25.40.10 InterPro:IPR006597 Pfam:PF08238 EMBL:AB012248
            EMBL:AY099743 EMBL:BT000275 IPI:IPI00524113 RefSeq:NP_199856.1
            UniGene:At.24402 ProteinModelPortal:Q9FK27 SMR:Q9FK27 IntAct:Q9FK27
            EnsemblPlants:AT5G50450.1 GeneID:835113 KEGG:ath:AT5G50450
            TAIR:At5g50450 eggNOG:NOG317292 HOGENOM:HOG000238617
            InParanoid:Q9FK27 OMA:CGKVNYC PhylomeDB:Q9FK27
            ProtClustDB:CLSN2687031 Genevestigator:Q9FK27 Uniprot:Q9FK27
        Length = 336

 Score = 127 (49.8 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 35/117 (29%), Positives = 56/117 (47%)

Query:    10 LPDELLSEILARVG--ACSLDDLLNAGLSCKLFNEITFDKYVLRQASIEK--IPAMPWH- 64
             L D+L+  IL ++   A S  D L    +CK  N +     VL +A  +   + A  W  
Sbjct:    25 LHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEKWSD 84

Query:    65 KNYSFLEKCRDSGNPEALYKQGVVEFFSYSNLEAGVAYLDIATKSGHLGASYILGVI 121
              ++ FL+ C ++GN +A Y  G++ F+   N  +G + +  A    H  A Y L VI
Sbjct:    85 SSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141


>TAIR|locus:2006847 [details] [associations]
            symbol:AT1G14800 "AT1G14800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 InterPro:IPR012340 SUPFAM:SSF50249
            IPI:IPI00527329 RefSeq:NP_172933.1 UniGene:At.28249
            UniGene:At.51613 ProteinModelPortal:F4HXU8
            EnsemblPlants:AT1G14800.1 GeneID:838045 KEGG:ath:AT1G14800
            OMA:RYRIDSS Uniprot:F4HXU8
        Length = 384

 Score = 108 (43.1 bits), Expect = 0.00098, P = 0.00098
 Identities = 27/107 (25%), Positives = 51/107 (47%)

Query:    46 DKYVLRQASIEKIPAMPW--HKNYSFLEKCRDSGNPEALYKQGVVEFFSYSNLEAGVAYL 103
             D+ VL+  ++  +   P    K++  ++KC  + NP+A Y +G++ +F+  + + G+ ++
Sbjct:   272 DERVLKTLNLAPLVKKPLSCRKHHLIMKKCLANNNPDAHYIKGIIWYFNLDHCDVGLHHI 331

Query:   104 DIATKSGHLGASYILGVIFLCKDDEDDDNESNQKGMQHLDKVYRAKR 150
              IA   G   A YI  V         D N    K  + +   +R KR
Sbjct:   332 GIAANGGQKEAIYIPVVFGEINQVGTDSNRKIAKRFKRVHDEFRFKR 378


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      199       199   0.00085  111 3  11 22  0.48    32
                                                     31  0.45    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  179 KB (2103 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.52u 0.13s 20.65t   Elapsed:  00:00:01
  Total cpu time:  20.52u 0.13s 20.65t   Elapsed:  00:00:01
  Start:  Fri May 10 00:39:02 2013   End:  Fri May 10 00:39:03 2013

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