BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038914
(570 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/549 (35%), Positives = 306/549 (55%), Gaps = 39/549 (7%)
Query: 38 LRERFKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSL 97
RER +S I I +DA+ +F M+ RP P + F+ F +A+TK ++ VL
Sbjct: 56 FRERLRSG----IVDIKKDDAIALFQEMIRSRP-LPSLVDFSRFFSAIARTKQFNLVLDF 110
Query: 98 FKRLNSTGLFPDLYAYNILINCFLQNGSS----------------------------LCV 129
K+L G+ ++Y NI+INCF + + L +
Sbjct: 111 CKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFL 170
Query: 130 ESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC 189
E ++ EA L ++ GC+PDV TYN+++NG+CR+G T +AL+L +M N
Sbjct: 171 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------V 224
Query: 190 KPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKH 249
K D TY+TIID LC+ G +D A LF +M+ + I + VTY SL+ G C A WN+
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 250 LFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYC 309
L +M+ + + PNV+TF V++D K GK+ A+ L + MI RG+ P+ TYNTL+DGYC
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 310 LTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVV 369
+ ++ A + M N C D+V+++ LI GYC K V++G+ ++R + +G+ V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 370 TYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTL 429
TY L G + +++ A +LF EM + V + Y +DGLC NG + KA+E+F L
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 430 RILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQM 489
+ K +L IV Y +I+G+CK G++E AW LF SLP G+ +V+TY +MI GLC G +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 490 DKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIV 549
+A+ L ME G PN +NTL+ +R+ + + +L+ M DAS++ +V
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584
Query: 550 VDLLVKNEI 558
+D+L+ E+
Sbjct: 585 IDMLLSGEL 593
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 97/191 (50%), Gaps = 1/191 (0%)
Query: 377 GLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYEL 436
G+ ++ + + A+ LF EM R+ + ++ F + + ++ + L +
Sbjct: 63 GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121
Query: 437 NIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLF 496
NI + N +I+ C+ + A+ + + ++G D T+N +I GL +G++ +A L
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 497 LDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
M G +P+ V +N+++ G R+ +TS ++LL +M+ RNV D T S ++D L ++
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 557 EISLNSIPQFK 567
+I FK
Sbjct: 242 GCIDAAISLFK 252
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 359 bits (922), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 210/574 (36%), Positives = 309/574 (53%), Gaps = 66/574 (11%)
Query: 39 RERFKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLF 98
RER +S + I +DA+ +F M++ RP P V F+ LF +AKTK YD VL+L
Sbjct: 57 RERLRSG----LVDIKADDAIDLFRDMIHSRP-LPTVIDFSRLFSAIAKTKQYDLVLALC 111
Query: 99 KRLNSTGLFPDLYAYNILINCF------------------------------LQNGSSLC 128
K++ G+ +LY +I+INCF L NG LC
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING--LC 169
Query: 129 VESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE---- 184
+E R+ EA L ++ G +PD+ T NTL+NGLC +G A+ L ++M +
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Query: 185 -----IGVVCKP--------------------DTVTYTTIIDGLCKKGFVDKAKELFLKM 219
+ V+CK D V Y+ IIDGLCK G +D A LF +M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 220 KDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKM 279
+ + I N +TY LI GFC A W++ L +M+ + + PNVVTF+V++D K GK+
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 280 DGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSIL 339
A L + MI RG+ PDT TY +LIDG+C +D+A ++ M S GC ++ +++IL
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 340 INGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHV 399
INGYCK +++GL L+RKM +G+ VTY+TL G E+ ++ A +LF EM V
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 400 AANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWE 459
N Y +DGLC NG KA+E+F + K EL+I YN +I G+C +++ AW+
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 460 LFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFI 519
LF SLP G+ V TYNIMI GLC G + +A LF ME G P+ +N L+ +
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Query: 520 RNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
+ + +K ++L+ + DAST+ +V+D+L
Sbjct: 590 GDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 109/208 (52%)
Query: 349 VEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTT 408
++ ++L+R M+ PTV+ + LF + + Q + L L +M +A N Y +
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 409 FIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVG 468
I+ C+ + A + L YE N ++++ LI+GLC GR+ A EL + +G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 469 LMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVI 528
D++T N +++GLC G+ +A L M G +PN V + ++ ++ +T+ +
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 529 ELLHRMDMRNVMPDASTLSIVVDLLVKN 556
ELL +M+ RN+ DA SI++D L K+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKH 276
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/561 (36%), Positives = 304/561 (54%), Gaps = 70/561 (12%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
+DA+ +F M+ RP P + FN L +AK +D V+SL +R+ + + DLY+YNI
Sbjct: 62 DDAVDLFGEMVQSRP-LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 116 LINCFLQNG------------------------SSL----CVESRIMEAAALFTKLRVF- 146
LINCF + SSL C RI EA AL ++ V
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 147 ----------------------------------GCEPDVFTYNTLINGLCRTGHTIVAL 172
GC+PD+FTY T++NGLC+ G +AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 173 NLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYT 232
+L ++M G E D V YTTIID LC V+ A LF +M ++ I PN VTY
Sbjct: 241 SLLKKMEKGKIE------ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 233 SLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILR 292
SLI C W++A L +M+++ + PNVVTF+ ++D K GK+ A +L + MI R
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 293 GVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEG 352
+ PD TY++LI+G+C+ ++D A+ +F M S C +VV+Y+ LI G+CK K VEEG
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 353 LNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDG 412
+ L+R+M +G+ VTY+TL GLF+ + A K+F +M + V + Y+ +DG
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 413 LCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMAD 472
LCK G + KA+ +F L+ K E +I +YN +I+G+CK G++E W+LF SL G+ +
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 473 VVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLH 532
V+ Y MI G C G ++A LF +M+ G PN +NTL+ +R+ + + EL+
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 533 RMDMRNVMPDASTLSIVVDLL 553
M + DAST+S+V+++L
Sbjct: 595 EMRSCGFVGDASTISMVINML 615
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 214/424 (50%), Gaps = 6/424 (1%)
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKP 191
++ +A LF ++ P + +N L++ + + + ++L E M N +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN------LRISY 113
Query: 192 DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
D +Y +I+ C++ + A + KM P+ VT +SL+ G+C+ +EA L
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLT 311
+M QPN VTF ++ L + K A L++ M+ RG +PD TY T+++G C
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 312 GKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTY 371
G ID A L ME DVV Y+ +I+ C K+V + LNL+ +M +KGIRP VVTY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 372 HTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRI 431
++L L + A +L +M + N ++ ID K G +V+A +L+ +
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 432 LKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDK 491
+ +I +Y+ LI+G C H RL+ A +F + +VVTYN +I G C ++++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 492 AHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
LF +M +GL N V +NTL+ G + + ++ +M V PD T SI++D
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 552 LLVK 555
L K
Sbjct: 474 GLCK 477
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 205/572 (35%), Positives = 301/572 (52%), Gaps = 62/572 (10%)
Query: 39 RERFKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLF 98
RER +S I I +DA+ +F M RP RP + F+ LF +A+TK YD VL L
Sbjct: 41 RERLRSG----IVDIKEDDAVDLFQEMTRSRP-RPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 99 KRLNSTGLFPDLYAYNILINC----------FLQNG------------------SSLCVE 130
K++ G+ +LY +I+INC F G + LC+E
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 131 SRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE------ 184
R+ EA L ++ G +P + T N L+NGLC G A+ L + M +
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 185 ---IGVVCKP--------------------DTVTYTTIIDGLCKKGFVDKAKELFLKMKD 221
+ V+CK D V Y+ IIDGLCK G +D A LF +M+
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 222 ENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDG 281
+ + + YT+LI GFCYA W++ L +M+ + + P+VV F+ ++D K GK+
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 282 ASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILIN 341
A L + MI RG+ PDT TY +LIDG+C ++D+A + M S GC ++ +++ILIN
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 342 GYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAA 401
GYCK +++GL L+RKM +G+ VTY+TL G E+ ++E A +LF EM V
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 402 NTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELF 461
+ Y +DGLC NG KA+E+F + K EL+I YN +I G+C +++ AW+LF
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 462 SSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRN 521
SLP G+ DV TYNIMI GLC G + +A LF ME G PN +N L+ +
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 522 NETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
+ +K +L+ + DAST+ +VVD+L
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 202/422 (47%), Gaps = 6/422 (1%)
Query: 135 EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTV 194
+A LF ++ P + ++ L + + RT + L+L ++M E+ + +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM-----ELKGIAH-NLY 108
Query: 195 TYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEM 254
T + +I+ C+ + A K+ P+ VT+++LI G C +EA L M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 255 MDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKI 314
++ G +P ++T +++ LC NGK+ A L++ M+ G +P+ TY ++ C +G+
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 315 DRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTL 374
A EL ME D V YSI+I+G CK ++ NL+ +M KG + ++ Y TL
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 375 FLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKY 434
G + + KL +M + + + ++ ID K G + +A EL + +
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 435 ELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHG 494
+ V+Y LIDG CK +L+ A + + G ++ T+NI+I+G C +D
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 495 LFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLV 554
LF M +G+ + V +NTL+ GF + EL M R V PD + I++D L
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 555 KN 556
N
Sbjct: 469 DN 470
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 183/470 (38%), Positives = 275/470 (58%), Gaps = 17/470 (3%)
Query: 38 LRERFKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSL 97
LRER + DI NDA+ +F M+ RP P + FN L + K K YD V+SL
Sbjct: 52 LRERLSKTRLRDIKL---NDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISL 107
Query: 98 FKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNT 157
K++ G+ DLY +NI+INCF C ++ A ++ K+ G EPD T +
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCF-------CCCFQVSLALSILGKMLKLGYEPDRVTIGS 160
Query: 158 LINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFL 217
L+NG CR A++L ++M EIG KPD V Y IID LCK V+ A + F
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVAYNAIIDSLCKTKRVNDAFDFFK 214
Query: 218 KMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNG 277
+++ + I PN VTYT+L+ G C ++ W++A L +M+ + + PNV+T++ ++D KNG
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 274
Query: 278 KMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYS 337
K+ A L E M+ + PD TY++LI+G CL +ID A ++F M S GC+ DVVSY+
Sbjct: 275 KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYN 334
Query: 338 ILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRN 397
LING+CK K VE+G+ L+R+M +G+ VTY+TL G F+ V+ A + F +M
Sbjct: 335 TLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 398 HVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIA 457
++ + + Y + GLC NG + KA+ +F ++ + +L+IV+Y +I G+CK G++E A
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 458 WELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPN 507
W LF SL GL D+VTY M+ GLC G + + L+ M+ +GL N
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 184/348 (52%)
Query: 209 VDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTV 268
++ A +LF M P+ V + L+ ++ L +M G++ ++ TF +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 269 IMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNG 328
+++ C ++ A +L M+ G +PD T +L++G+C ++ A L M G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 329 CMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHAL 388
D+V+Y+ +I+ CKTK V + + ++++ KGIRP VVTY L GL + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 389 KLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGL 448
+L +M + + N Y+ +D KNG +++A ELF + + + +IV+Y+ LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 449 CKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNF 508
C H R++ A ++F + G +ADVV+YN +I+G C +++ LF +M +GL N
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 509 VIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
V +NTL+ GF + + K E +MD + PD T +I++ L N
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 123/241 (51%)
Query: 313 KIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYH 372
K++ A +LF M + +V ++ L++ K K + ++L +KM GIR + T++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 373 TLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRIL 432
+ QV AL + +M + + + ++G C+ + AV L + +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 433 KYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKA 492
Y+ +IV+YN +ID LCK R+ A++ F + R G+ +VVTY +++GLCN + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 493 HGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDL 552
L DM K + PN + ++ L+ F++N + + EL M ++ PD T S +++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 553 L 553
L
Sbjct: 305 L 305
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 35/308 (11%)
Query: 278 KMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYS 337
K++ A L M+ P +N L+ K D L ME G +D+ +++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 338 ILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRN 397
I+IN +C V L++ KML G P VT +L G ++V A+ L D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 398 HVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLC-------- 449
+ Y ID LCK + A + F+ + N+V+Y L++GLC
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 450 ---------------------------KHGRLEIAWELFSSLPRVGLMADVVTYNIMIHG 482
K+G++ A ELF + R+ + D+VTY+ +I+G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 483 LCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPD 542
LC ++D+A+ +F M +KG + V +NTL+ GF + ++L M R ++ +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 543 ASTLSIVV 550
T + ++
Sbjct: 365 TVTYNTLI 372
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%)
Query: 422 AVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIH 481
A++LF + + +IV +N L+ + K + ++ L + +G+ D+ T+NI+I+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 482 GLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMP 541
C Q+ A + M G EP+ V +L+ GF R N S + L+ +M P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 542 DASTLSIVVDLLVKNEISLNSIPQFK 567
D + ++D L K + ++ FK
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFK 214
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 345 bits (886), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 201/574 (35%), Positives = 305/574 (53%), Gaps = 65/574 (11%)
Query: 44 SSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNS 103
SSG + I +DA+ +F M+ RP P V FN LF +AKTK Y+ VL+L K++ S
Sbjct: 61 SSG---LVGIKADDAVDLFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116
Query: 104 TGLFPDLYAYNILINCF------------------------------LQNGSSLCVESRI 133
G+ +Y +I+INCF L NG LC+E R+
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNG--LCLECRV 174
Query: 134 MEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE--------- 184
EA L ++ G +P + T NTL+NGLC G A+ L + M +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 185 IGVVCKP--------------------DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENI 224
+ V+CK D V Y+ IIDGLCK G +D A LF +M+ +
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 225 NPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASR 284
+ +TY +LI GFC A W++ L +M+ + + PNVVTF+V++D K GK+ A +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 285 LLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYC 344
LL+ M+ RG+ P+T TYN+LIDG+C +++ A ++ M S GC D+++++ILINGYC
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 345 KTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTY 404
K +++GL L+R+M +G+ VTY+TL G + ++E A KLF EM V +
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 405 IYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSL 464
Y +DGLC NG + KA+E+F + K EL+I Y +I G+C +++ AW+LF SL
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 465 PRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNET 524
P G+ D YNIMI LC + KA LF M +G P+ + +N L+ + +++
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDA 594
Query: 525 SKVIELLHRMDMRNVMPDASTLSIVVDLLVKNEI 558
+ EL+ M D ST+ +V+++L E+
Sbjct: 595 TTAAELIEEMKSSGFPADVSTVKMVINMLSSGEL 628
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/497 (37%), Positives = 282/497 (56%), Gaps = 16/497 (3%)
Query: 58 ALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILI 117
AL V M+ + P + + + L +K ++L ++ TG P+ +N LI
Sbjct: 135 ALAVLGKMMKL-GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 118 N-CFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 176
+ FL N +S EA AL ++ GC+PD+ TY ++NGLC+ G T +A NL
Sbjct: 194 HGLFLHNKAS--------EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 177 EMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLIC 236
+M G E GV+ Y TIIDGLCK +D A LF +M+ + I PN VTY+SLI
Sbjct: 246 KMEQGKLEPGVL------IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 237 GFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKP 296
C W++A L +M+++ + P+V TF+ ++D K GK+ A +L + M+ R + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 297 DTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLY 356
TY++LI+G+C+ ++D A+++F M S C DVV+Y+ LI G+CK K VEEG+ ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 357 RKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKN 416
R+M +G+ VTY+ L GLF+ + A ++F EM + V N Y T +DGLCKN
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 417 GYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTY 476
G + KA+ +F L+ K E I +YN +I+G+CK G++E W+LF +L G+ DVV Y
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 477 NIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDM 536
N MI G C G ++A LF +M+ G PN +NTL+ +R+ + EL+ M
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Query: 537 RNVMPDASTLSIVVDLL 553
DAST+ +V ++L
Sbjct: 600 CGFAGDASTIGLVTNML 616
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 248/517 (47%), Gaps = 52/517 (10%)
Query: 39 RERFKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLF 98
RE+ +G ++ + +DA+ +F M+ RP P + F+ L +AK +D V+SL
Sbjct: 49 REKLSRNG---LSELKLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLG 104
Query: 99 KRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTL 158
+++ + G+ + Y TY+ L
Sbjct: 105 EQMQNLGIPHNHY------------------------------------------TYSIL 122
Query: 159 INGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLK 218
IN CR +AL + +M E P+ VT +++++G C + +A L +
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYE------PNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 219 MKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGK 278
M PN VT+ +LI G N +EA L M+ +G QP++VT+ V+++ LCK G
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 279 MDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSI 338
D A LL M ++P YNT+IDG C +D A LF ME+ G +VV+YS
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 339 LINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNH 398
LI+ C + L M+ + I P V T+ L + ++ A KL+DEM +
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 399 VAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAW 458
+ + Y++ I+G C + + +A ++F + ++V+YN LI G CK+ R+E
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 459 ELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGF 518
E+F + + GL+ + VTYNI+I GL G D A +F +M + G+ PN + +NTL+ G
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 519 IRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVK 555
+N + K + + + + P T +I+++ + K
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 226/435 (51%), Gaps = 9/435 (2%)
Query: 122 QNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 181
+NG S E ++ +A ALF ++ P + ++ L++ + + V ++L E+M N
Sbjct: 54 RNGLS---ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN- 109
Query: 182 NGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYA 241
+G+ + TY+ +I+ C++ + A + KM PN VT +SL+ G+C++
Sbjct: 110 ---LGI--PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 242 NDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTY 301
+EA L +M G QPN VTF ++ L + K A L++ M+ +G +PD TY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 302 NTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLS 361
+++G C G D A L ME V+ Y+ +I+G CK K +++ LNL+++M +
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 362 KGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVK 421
KGIRP VVTY +L L + A +L +M + + + ++ ID K G +V+
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 422 AVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIH 481
A +L+ + + +IV+Y+ LI+G C H RL+ A ++F + DVVTYN +I
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 482 GLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMP 541
G C ++++ +F +M +GL N V +N L+ G + + E+ M V P
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 542 DASTLSIVVDLLVKN 556
+ T + ++D L KN
Sbjct: 465 NIMTYNTLLDGLCKN 479
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 113/227 (49%), Gaps = 1/227 (0%)
Query: 341 NGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVA 400
NG + K +++ + L+ +M+ P+++ + L + ++++ + + L ++M+ +
Sbjct: 55 NGLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 401 ANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWEL 460
N Y Y+ I+ C+ + A+ + + L YE NIV+ + L++G C R+ A L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 461 FSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIR 520
+ G + VT+N +IHGL + +A L M AKG +P+ V + ++ G +
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 521 NNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKNEISLNSIPQFK 567
+T LL++M+ + P + ++D L K + +++ FK
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/586 (34%), Positives = 300/586 (51%), Gaps = 79/586 (13%)
Query: 40 ERFKSSGEGDITTITPN---------DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKH 90
ER +S GD I N DA+ +F M+ RP P + FN L +AK
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNK 98
Query: 91 YDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNG------------------------SS 126
++ V+SL +++ + G+ DLY Y+I INCF + SS
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 127 L----CVESRIMEAAALFTKLRVFG----------------------------------- 147
L C RI +A AL ++ G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 148 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKG 207
C+PD+ TY T++NGLC+ G +AL+L ++M G E D V Y TIIDGLCK
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE------ADVVIYNTIIDGLCKYK 272
Query: 208 FVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFT 267
+D A LF +M ++ I P+ TY+SLI C W++A L +M+++ + PNVVTF+
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 268 VIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESN 327
++D K GK+ A +L + MI R + PD TY++LI+G+C+ ++D A+ +F M S
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 328 GCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHA 387
C +VV+YS LI G+CK K VEEG+ L+R+M +G+ VTY TL G F+ ++A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 388 LKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDG 447
+F +M V N Y +DGLCKNG + KA+ +F L+ E +I +YN +I+G
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 448 LCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPN 507
+CK G++E WELF +L G+ +V+ YN MI G C G ++A L M+ G PN
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 508 FVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
+NTL+ +R+ + EL+ M DAST+ +V ++L
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Score = 208 bits (529), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 221/428 (51%), Gaps = 12/428 (2%)
Query: 132 RIMEAAALF---TKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVV 188
++ +A LF K R F P + +N L++ + + + ++L E+M +G+
Sbjct: 63 KVDDAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQT----LGI- 114
Query: 189 CKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAK 248
D TY+ I+ C++ + A + KM P+ VT +SL+ G+C++ ++A
Sbjct: 115 -SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 249 HLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGY 308
L +M++ G +P+ TFT ++ L + K A L++ M+ RG +PD TY T+++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 309 CLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTV 368
C G ID A L ME DVV Y+ +I+G CK K +++ LNL+ +M +KGIRP V
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 369 VTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRT 428
TY +L L + A +L +M + N ++ ID K G +V+A +L+
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 429 LRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQ 488
+ + +I +Y+ LI+G C H RL+ A +F + +VVTY+ +I G C +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 489 MDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSI 548
+++ LF +M +GL N V + TL+ GF + + + +M V P+ T +I
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 549 VVDLLVKN 556
++D L KN
Sbjct: 474 LLDGLCKN 481
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 166/377 (44%), Gaps = 51/377 (13%)
Query: 212 AKELFLKMKDENI-NPNAVTYTSLICGF-CYANDWNEAKHLFIEMMDQGVQPNVVTFTVI 269
AK LF+ + I NP V +CG C+ + A + E ++
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYRE--------------IL 54
Query: 270 MDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGC 329
+ L K+D A L M+ P +N L+ K + L M++ G
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 330 MHDVVSYSI-----------------------------------LINGYCKTKDVEEGLN 354
HD+ +YSI L+NGYC +K + + +
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 355 LYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLC 414
L +M+ G +P T+ TL GLF ++ A+ L D+M + + Y T ++GLC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 415 KNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVV 474
K G I A+ L + + K E ++V YN +IDGLCK+ ++ A LF+ + G+ DV
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 475 TYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRM 534
TY+ +I LCN G+ A L DM + + PN V F+ L+ F++ + + +L M
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 535 DMRNVMPDASTLSIVVD 551
R++ PD T S +++
Sbjct: 355 IKRSIDPDIFTYSSLIN 371
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 342 bits (876), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 176/481 (36%), Positives = 271/481 (56%), Gaps = 13/481 (2%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESR 132
P + + N L ++L ++ G PD + L++ Q+ ++
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH-------NK 185
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPD 192
EA AL ++ V GC+PD+ TY +INGLC+ G +ALNL +M G E D
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE------AD 239
Query: 193 TVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFI 252
V Y+T+ID LCK VD A LF +M ++ I P+ TY+SLI C W++A L
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 253 EMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTG 312
+M+++ + PNVVTF ++D K GK+ A +L + MI R + P+ TYN+LI+G+C+
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 313 KIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYH 372
++D A+++F M S C+ DVV+Y+ LING+CK K V +G+ L+R M +G+ VTY
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 373 TLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRIL 432
TL G F+ ++A +F +M + V N Y T +DGLCKNG + KA+ +F L+
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 433 KYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKA 492
K E +I +YN + +G+CK G++E W+LF SL G+ DV+ YN MI G C G ++A
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 493 HGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDL 552
+ LF+ M+ G P+ +NTL+ +R+ + + EL+ M DAST +V D+
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Query: 553 L 553
L
Sbjct: 600 L 600
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 223/425 (52%), Gaps = 6/425 (1%)
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKP 191
++ EA LF ++ P + ++ L++ + + + ++ E+M +GV
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME----ILGV--SH 98
Query: 192 DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
+ TY +I+ LC++ + A + KM P+ VT SL+ GFC+ N +EA L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLT 311
+M++ G QP+ VTFT ++ L ++ K A L+E M+++G +PD TY +I+G C
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 312 GKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTY 371
G+ D A L ME DVV YS +I+ CK + V++ LNL+ +M +KGIRP V TY
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 372 HTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRI 431
+L L + A +L +M + N + + ID K G +++A +LF +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 432 LKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDK 491
+ NIV+YN LI+G C H RL+ A ++F+ + + DVVTYN +I+G C ++
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 492 AHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
LF DM +GL N V + TL+ GF + ++ + +M V P+ T + ++D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 552 LLVKN 556
L KN
Sbjct: 459 GLCKN 463
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 66 LNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGS 125
L+++ +P V ++N + K + +LF ++ G PD YN LI L++G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 126 SLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGL 162
+A L ++R D TY + + L
Sbjct: 571 KAA-------SAELIKEMRSCRFAGDASTYGLVTDML 600
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 339 bits (870), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/578 (33%), Positives = 297/578 (51%), Gaps = 74/578 (12%)
Query: 39 RERFKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVL--- 95
+ER ++ I I NDA+ +F+ M+ RP P+ FN L +A+TK YD VL
Sbjct: 39 KERLRNG----IVDIKVNDAIDLFESMIQSRPLPTPI-DFNRLCSAVARTKQYDLVLGFC 93
Query: 96 --------------------------------SLFKRLNSTGLFPDLYAYNILINCFLQN 123
S+ R G PD ++ L+N F
Sbjct: 94 KGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 153
Query: 124 G----------------------------SSLCVESRIMEAAALFTKLRVFGCEPDVFTY 155
G + LC++ R+ EA L ++ +G +PD TY
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 156 NTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKEL 215
++N LC++G++ +AL+LF +M N K V Y+ +ID LCK G D A L
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERN------IKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 216 FLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCK 275
F +M+ + I + VTY+SLI G C W++ + EM+ + + P+VVTF+ ++D K
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 276 NGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVS 335
GK+ A L MI RG+ PDT TYN+LIDG+C + A ++F M S GC D+V+
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 336 YSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMR 395
YSILIN YCK K V++G+ L+R++ SKG+ P +TY+TL LG + ++ A +LF EM
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 396 RNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLE 455
V + Y +DGLC NG + KA+E+F ++ + L I YN +I G+C +++
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 456 IAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLM 515
AW LF SL G+ DVVTYN+MI GLC G + +A LF M+ G P+ +N L+
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 516 LGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
+ + +EL+ M + D+ST+ +V+D+L
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 220/437 (50%), Gaps = 11/437 (2%)
Query: 121 LQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMA- 179
L+NG V+ ++ +A LF + P +N L + + RT + L + M
Sbjct: 42 LRNG---IVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMEL 98
Query: 180 NGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFC 239
NG + D T T +I+ C+K + A + + P+ +T+++L+ GFC
Sbjct: 99 NG-------IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC 151
Query: 240 YANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTS 299
+EA L M++ +P++VT + +++ LC G++ A L++ M+ G +PD
Sbjct: 152 LEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 211
Query: 300 TYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKM 359
TY +++ C +G A +LF ME VV YSI+I+ CK ++ L+L+ +M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 360 LSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYI 419
KGI+ VVTY +L GL + + K+ EM ++ + ++ ID K G +
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 420 VKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIM 479
++A EL+ + + ++YN LIDG CK L A ++F + G D+VTY+I+
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 480 IHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNV 539
I+ C ++D LF ++ +KGL PN + +NTL+LGF ++ + + EL M R V
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 540 MPDASTLSIVVDLLVKN 556
P T I++D L N
Sbjct: 452 PPSVVTYGILLDGLCDN 468
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 89/230 (38%), Gaps = 36/230 (15%)
Query: 339 LINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNH 398
L NG K V + ++L+ M+ PT + ++ L + Q + L M N
Sbjct: 42 LRNGIVDIK-VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 399 VAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAW 458
+ + Y T I NC C+ +L A+
Sbjct: 101 IEHDMYTMTIMI-------------------------------NCY----CRKKKLLFAF 125
Query: 459 ELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGF 518
+ ++G D +T++ +++G C +G++ +A L M P+ V +TL+ G
Sbjct: 126 SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL 185
Query: 519 IRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKNEISLNSIPQFKR 568
S+ + L+ RM PD T V++ L K+ S ++ F++
Sbjct: 186 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 339 bits (869), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/446 (40%), Positives = 267/446 (59%), Gaps = 17/446 (3%)
Query: 61 VFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCF 120
+F M+ RP P + F+ + +AK+K+YD V+SLF + G+ DLY+YNI+INC
Sbjct: 56 LFCKMIQSRP-LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC- 113
Query: 121 LQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 180
LC SR + A ++ K+ FG EPDV T ++LING C+ A++L +M
Sbjct: 114 ------LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME- 166
Query: 181 GNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCY 240
E+G +PD V Y TIIDG CK G V+ A ELF +M+ + + +AVTY SL+ G C
Sbjct: 167 ---EMGF--RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 241 ANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTST 300
+ W++A L +M+ + + PNV+TFT ++D K GK A +L E M R V PD T
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 301 YNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKML 360
YN+LI+G C+ G++D A+++ M + GC+ DVV+Y+ LING+CK+K V+EG L+R+M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 361 SKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIV 420
+G+ +TY+T+ G F+ + + A ++F M N Y+ + GLC N +
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVE 398
Query: 421 KAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMI 480
KA+ LF ++ + EL+I +YN +I G+CK G +E AW+LF SL GL DVV+Y MI
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 481 HGLCNDGQMDKAHGLFLDMEAKGLEP 506
G C Q DK+ L+ M+ GL P
Sbjct: 459 SGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 207/417 (49%), Gaps = 11/417 (2%)
Query: 135 EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEIGVVCKPDT 193
E LF K+ P + ++ +++ + ++ + + ++LF M G G D
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGH-------DL 104
Query: 194 VTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIE 253
+Y +I+ LC+ A + KM P+ VT +SLI GFC N +A L +
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 254 MMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGK 313
M + G +P+VV + I+D CK G ++ A L + M GV+ D TYN+L+ G C +G+
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 314 IDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHT 373
A L M + +V++++ +I+ + K E + LY +M + + P V TY++
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 374 LFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILK 433
L GL +V+ A ++ D M + Y T I+G CK+ + + +LFR +
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 434 YELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAH 493
+ ++YN +I G + GR + A E+FS R+ ++ TY+I+++GLC + +++KA
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 494 GLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVV 550
LF +M+ +E + +N ++ G + +L + + + PD + + ++
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%)
Query: 348 DVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYT 407
++EE ++L+ KM+ P++V + + + + + + LF M + + Y Y
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 408 TFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRV 467
I+ LC+ V A+ + + YE ++V+ + LI+G C+ R+ A +L S + +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 468 GLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKV 527
G DVV YN +I G C G ++ A LF ME G+ + V +N+L+ G + S
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 528 IELLHRMDMRNVMPDASTLSIVVDLLVK 555
L+ M MR+++P+ T + V+D+ VK
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVK 256
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 64/132 (48%)
Query: 437 NIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLF 496
+IV ++ ++ + K ++ LF + G+ D+ +YNI+I+ LC + A +
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 497 LDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
M G EP+ V ++L+ GF + N I+L+ +M+ PD + ++D K
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 187
Query: 557 EISLNSIPQFKR 568
+ +++ F R
Sbjct: 188 GLVNDAVELFDR 199
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 335 bits (858), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 201/586 (34%), Positives = 302/586 (51%), Gaps = 82/586 (13%)
Query: 40 ERFKSSGEGDITTITPN---------DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKH 90
ER +S GD I N DA+ +F M+ RP P + FN L +AK
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNK 98
Query: 91 YDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNG------------------------SS 126
++ V+SL +++ + G+ DLY Y+I INCF + SS
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 127 L----CVESRIMEAAALFTKLRVFG----------------------------------- 147
L C RI +A AL ++ G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 148 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKG 207
C+PD+ TY T++NGLC+ G +ALNL +M K + V + TIID LCK
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------IKANVVIFNTIIDSLCKYR 272
Query: 208 FVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFT 267
V+ A +LF +M+ + I PN VTY SLI C W++A L M+++ + PNVVTF
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 268 VIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESN 327
++D K GK+ A +L E MI R + PDT TYN LI+G+C+ ++D A+++F M S
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 328 GCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHA 387
C+ ++ +Y+ LING+CK K VE+G+ L+R+M +G+ VTY T+ G F+ + A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 388 LKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDG 447
+F +M N V + Y+ + GLC G + A+ +F+ L+ + ELNI YN +I+G
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512
Query: 448 LCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPN 507
+CK G++ AW+LF SL + DVVTYN MI GLC+ + +A LF M+ G PN
Sbjct: 513 MCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPN 569
Query: 508 FVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
+NTL+ +R+ + + EL+ M + DAST+S+V ++L
Sbjct: 570 SGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 168/377 (44%), Gaps = 51/377 (13%)
Query: 212 AKELFLKMKDENI-NPNAVTYTSLICGF-CYANDWNEAKHLFIEMMDQGVQPNVVTFTVI 269
AK LF+ + I NP V +CG C+ + A + E ++
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYRE--------------IL 54
Query: 270 MDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGC 329
+ L K+D A L M+ P +N L+ K + L M++ G
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 330 MHDVVSYSI-----------------------------------LINGYCKTKDVEEGLN 354
HD+ +YSI L+NGYC +K + + +
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 355 LYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLC 414
L +M+ G +P T+ TL GLF ++ A+ L D+M + + Y T ++GLC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 415 KNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVV 474
K G I A+ L + + + N+V +N +ID LCK+ +E+A +LF+ + G+ +VV
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 475 TYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRM 534
TYN +I+ LCN G+ A L +M K + PN V FN L+ F + + + +L M
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 535 DMRNVMPDASTLSIVVD 551
R++ PD T +++++
Sbjct: 355 IQRSIDPDTITYNLLIN 371
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 333 bits (854), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/561 (33%), Positives = 299/561 (53%), Gaps = 70/561 (12%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
+DA+ +F M+ RP P + F+ L +AK +D V+SL +++ + G+ +LY Y+I
Sbjct: 63 DDAVNLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 116 LINCFLQNG----------------------------SSLCVESRIMEAAALFTKLRVFG 147
LINCF + + C +RI +A +L ++ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 148 CEPDVFTYNTLI-----------------------------------NGLCRTGHTIVAL 172
+PD FT+NTLI NGLC+ G +AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 173 NLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYT 232
+L ++M G E GV V Y TIID LC V+ A LF +M ++ I PN VTY
Sbjct: 242 SLLKKMEQGKIEPGV------VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 233 SLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILR 292
SLI C W++A L +M+++ + PNVVTF+ ++D K GK+ A +L + MI R
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 293 GVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEG 352
+ PD TY++LI+G+C+ ++D A+ +F M S C +VV+Y+ LI G+CK K V+EG
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 353 LNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDG 412
+ L+R+M +G+ VTY TL G F+ + ++A +F +M + V + Y+ +DG
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 413 LCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMAD 472
LC NG + A+ +F L+ K E +I +YN +I+G+CK G++E W+LF SL G+ +
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 473 VVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLH 532
VVTY M+ G C G ++A LF +M+ +G P+ +NTL+ +R+ + + EL+
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595
Query: 533 RMDMRNVMPDASTLSIVVDLL 553
M + DAST+ +V ++L
Sbjct: 596 EMRSCRFVGDASTIGLVTNML 616
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 218/424 (51%), Gaps = 9/424 (2%)
Query: 150 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFV 209
P + ++ L++ + + + ++L E+M N +G+ + TY+ +I+ C++ +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SHNLYTYSILINCFCRRSQL 132
Query: 210 DKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVI 269
A + KM P+ VT SL+ GFC+ N ++A L +M++ G QP+ TF +
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192
Query: 270 MDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGC 329
+ L ++ + A L++ M+++G +PD TY +++G C G ID A L ME
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252
Query: 330 MHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALK 389
VV Y+ +I+ C K+V + LNL+ +M +KGIRP VVTY++L L + A +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 390 LFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLC 449
L +M + N ++ ID K G +V+A +L+ + + +I +Y+ LI+G C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 450 KHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFV 509
H RL+ A +F + +VVTYN +I G C ++D+ LF +M +GL N V
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 510 IFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN---EISLNSIPQF 566
+ TL+ GF + E + +M V+PD T SI++D L N E +L
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 567 KRHK 570
+R K
Sbjct: 493 QRSK 496
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 169/342 (49%)
Query: 209 VDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTV 268
+D A LF M P+ V ++ L+ N ++ L +M + G+ N+ T+++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 269 IMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNG 328
+++ C+ ++ A +L M+ G +PD T N+L++G+C +I A L M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 329 CMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHAL 388
D +++ LI+G + E + L +M+ KG +P +VTY + GL + ++ AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 389 KLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGL 448
L +M + + IY T ID LC + A+ LF + N+V+YN LI L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 449 CKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNF 508
C +GR A L S + + +VVT++ +I +G++ +A L+ +M + ++P+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 509 VIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVV 550
+++L+ GF ++ + + M ++ P+ T + ++
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 136/278 (48%)
Query: 278 KMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYS 337
K+D A L M+ P ++ L+ K D L M++ G H++ +YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 338 ILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRN 397
ILIN +C+ + L + KM+ G P +VT ++L G +++ A+ L +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 398 HVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIA 457
+++ + T I GL ++ +AV L + + + ++V+Y +++GLCK G +++A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 458 WELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLG 517
L + + + VV YN +I LCN ++ A LF +M+ KG+ PN V +N+L+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 518 FIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVK 555
S LL M R + P+ T S ++D VK
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 304/591 (51%), Gaps = 92/591 (15%)
Query: 41 RFKSSGEGDITTITPN--------DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYD 92
R SSG GD I N DA+ +F M+ RP P + FN L +AK K +D
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRP-LPSIVEFNKLLSAIAKMKKFD 102
Query: 93 TVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDV 152
V+SL +++ + LY YNILINCF C S+I A AL K+ G EP +
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCF-------CRRSQISLALALLGKMMKLGYEPSI 155
Query: 153 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTII------------ 200
T ++L+NG C A+ L ++M E+G +PDT+T+TT+I
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMV----EMGY--RPDTITFTTLIHGLFLHNKASEA 209
Query: 201 -----------------------DGLCKKGFVDKAKEL---------------------- 215
+GLCK+G D A L
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 216 -------------FLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPN 262
F +M+ + I PN VTY+SLI C W++A L +M+++ + PN
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 263 VVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFV 322
+VTF ++D K GK A +L + MI R + PD TYN+L++G+C+ ++D+A+++F
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 323 SMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVH 382
M S C DVV+Y+ LI G+CK+K VE+G L+R+M +G+ VTY TL GLF
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 383 QVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYN 442
++A K+F +M + V + Y+ +DGLC NG + KA+E+F ++ + +L+I Y
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 443 CLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAK 502
+I+G+CK G+++ W+LF SL G+ +VVTYN MI GLC+ + +A+ L M+
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 503 GLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
G PN +NTL+ +R+ + + EL+ M + DAST+ +V ++L
Sbjct: 570 GPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 214/425 (50%), Gaps = 6/425 (1%)
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKP 191
++ +A LF + P + +N L++ + + V ++L E+M G+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY--- 121
Query: 192 DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
TY +I+ C++ + A L KM P+ VT +SL+ G+C+ ++A L
Sbjct: 122 ---TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLT 311
+M++ G +P+ +TFT ++ L + K A L++ M+ RG +P+ TY +++G C
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 312 GKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTY 371
G D A L ME+ DVV ++ +I+ CK + V++ LNL+++M +KGIRP VVTY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 372 HTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRI 431
+L L + A +L +M + N + ID K G V+A +L+ +
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 432 LKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDK 491
+ +I +YN L++G C H RL+ A ++F + DVVTYN +I G C +++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 492 AHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
LF +M +GL + V + TL+ G + + ++ +M V PD T SI++D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 552 LLVKN 556
L N
Sbjct: 479 GLCNN 483
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 184/378 (48%)
Query: 191 PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHL 250
P V + ++ + K D L KM+ I TY LI FC + + A L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 251 FIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCL 310
+MM G +P++VT + +++ C ++ A L++ M+ G +PDT T+ TLI G L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 311 TGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVT 370
K A L M GC ++V+Y +++NG CK D + LNL KM + I VV
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 371 YHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLR 430
++T+ L + V+ AL LF EM + N Y++ I LC G A +L +
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 431 ILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMD 490
K N+V++N LID K G+ A +L+ + + + D+ TYN +++G C ++D
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 491 KAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVV 550
KA +F M +K P+ V +NTL+ GF ++ EL M R ++ D T + ++
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 551 DLLVKNEISLNSIPQFKR 568
L + N+ FK+
Sbjct: 443 QGLFHDGDCDNAQKVFKQ 460
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 272/483 (56%), Gaps = 15/483 (3%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILIN-CFLQNGSSLCVE 130
P + + + L K ++L ++ G PD + LI+ FL N +S
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS---- 132
Query: 131 SRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCK 190
EA AL ++ GC+P++ TY ++NGLC+ G +A NL +M E
Sbjct: 133 ----EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ 182
Query: 191 PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHL 250
D V + TIID LCK VD A LF +M+ + I PN VTY+SLI C W++A L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 251 FIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCL 310
+M+++ + PN+VTF ++D K GK A +L + MI R + PD TYN+LI+G+C+
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 311 TGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVT 370
++D+A+++F M S C D+ +Y+ LI G+CK+K VE+G L+R+M +G+ VT
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 371 YHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLR 430
Y TL GLF ++A K+F +M + V + Y+ +DGLC NG + KA+E+F ++
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 431 ILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMD 490
+ +L+I Y +I+G+CK G+++ W+LF SL G+ +VVTYN MI GLC+ +
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 491 KAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVV 550
+A+ L M+ G P+ +NTL+ +R+ + + EL+ M + DAST+ +V
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 542
Query: 551 DLL 553
++L
Sbjct: 543 NML 545
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 209/407 (51%), Gaps = 6/407 (1%)
Query: 150 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFV 209
P +F +N L++ + + + ++L E+M +G+ + TY +I+ C++ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQI 61
Query: 210 DKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVI 269
A L KM P+ VT +SL+ G+C+ ++A L +M++ G +P+ +TFT +
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 270 MDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGC 329
+ L + K A L++ M+ RG +P+ TY +++G C G ID A L ME+
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 330 MHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALK 389
DVV ++ +I+ CK + V++ LNL+++M +KGIRP VVTY +L L + A +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 390 LFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLC 449
L +M + N + ID K G V+A +L + + +I +YN LI+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 450 KHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFV 509
H RL+ A ++F + D+ TYN +I G C +++ LF +M +GL + V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 510 IFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
+ TL+ G + + ++ +M V PD T SI++D L N
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 183/378 (48%)
Query: 191 PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHL 250
P + ++ + K D L KM+ I+ N TY LI FC + + A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 251 FIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCL 310
+MM G +P++VT + +++ C ++ A L++ M+ G +PDT T+ TLI G L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 311 TGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVT 370
K A L M GC ++V+Y +++NG CK D++ NL KM + I VV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 371 YHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLR 430
++T+ L + V+ AL LF EM + N Y++ I LC G A +L +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 431 ILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMD 490
K N+V++N LID K G+ A +L + + + D+ TYN +I+G C ++D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 491 KAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVV 550
KA +F M +K P+ +NTL+ GF ++ EL M R ++ D T + ++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 551 DLLVKNEISLNSIPQFKR 568
L + N+ FK+
Sbjct: 368 QGLFHDGDCDNAQKVFKQ 385
Score = 36.2 bits (82), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 66 LNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGS 125
L+++ +P V ++N + L + +L K++ G PD YN LI L++G
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 126 SLCVESRIME 135
I E
Sbjct: 516 KAASAELIRE 525
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/517 (35%), Positives = 286/517 (55%), Gaps = 18/517 (3%)
Query: 42 FKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRL 101
F S G +T + + F+ +L+ ++ LFG + +T + V +LF ++
Sbjct: 159 FSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV-ALFDQM 217
Query: 102 NSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLING 161
GL P + +N LIN LC+E R++EAAAL K+ G DV TY T++NG
Sbjct: 218 VEIGLTPVVITFNTLIN-------GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 270
Query: 162 LCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKD 221
+C+ G T ALNL +M + KPD V Y+ IID LCK G A+ LF +M +
Sbjct: 271 MCKMGDTKSALNLLSKMEETH------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 222 ENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDG 281
+ I PN TY +I GFC W++A+ L +M+++ + P+V+TF ++ K GK+
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 282 ASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILIN 341
A +L + M+ R + PDT TYN++I G+C + D A+ +F M S DVV+++ +I+
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIID 440
Query: 342 GYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAA 401
YC+ K V+EG+ L R++ +G+ TY+TL G EV + A LF EM + V
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 402 NTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELF 461
+T + G C+N + +A+ELF +++ K +L+ V+YN +I G+CK +++ AW+LF
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 462 SSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRN 521
SLP G+ DV TYN+MI G C + A+ LF M+ G EP+ +NTL+ G ++
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 522 NETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKNEI 558
E K IEL+ M DA T+ +V DL+ +
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRL 657
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 166/362 (45%), Gaps = 19/362 (5%)
Query: 209 VDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTV 268
+D A + F M AV +I F N + A L+ +M + + N+ +F +
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 269 IMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNG 328
++ C K+ + + G +PD T+NTL+ G CL +I A LF M G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 329 CMHD---------------VVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHT 373
+ V++++ LING C V E L KM+ KG+ VVTY T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 374 LFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILK 433
+ G+ ++ + AL L +M H+ + IY+ ID LCK+G+ A LF +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 434 YELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAH 493
N+ +YNC+IDG C GR A L + + DV+T+N +I +G++ +A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 494 GLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
L +M + + P+ V +N+++ GF ++N + M PD T + ++D+
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442
Query: 554 VK 555
+
Sbjct: 443 CR 444
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/452 (37%), Positives = 259/452 (57%), Gaps = 14/452 (3%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
NDAL +F M++ RP P + F L +AK YD V+SLF+++ G+ P L NI
Sbjct: 65 NDALDLFTRMVHSRP-LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
+++C +C+ S+ A+ K+ G EPD+ T+ +L+NG C A+ LF
Sbjct: 124 VMHC-------VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALF 176
Query: 176 EEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLI 235
+++ +G+ KP+ VTYTT+I LCK ++ A ELF +M PN VTY +L+
Sbjct: 177 DQI------LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 236 CGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVK 295
G C W +A L +MM + ++PNV+TFT ++D K GK+ A L +MI V
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
Query: 296 PDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNL 355
PD TY +LI+G C+ G +D AR++F ME NGC + V Y+ LI+G+CK+K VE+G+ +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 356 YRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCK 415
+ +M KG+ +TY L G V + + A ++F++M + Y +DGLC
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410
Query: 416 NGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVT 475
NG + KA+ +F +R + ++NIV+Y +I G+CK G++E A++LF SL G+ +V+T
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT 470
Query: 476 YNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPN 507
Y MI G C G + +A LF M+ G PN
Sbjct: 471 YTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 211/446 (47%), Gaps = 41/446 (9%)
Query: 135 EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTV 194
+A LFT++ P + + L++ + + V ++LFE+M +G+ P
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ----ILGI--PPLLC 119
Query: 195 TYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEM 254
T ++ +C +A KM P+ VT+TSL+ G+C+ N +A LF ++
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 255 MDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKI 314
+ G +PNVVT+T ++ LCKN ++ A L M G +P+ TYN L+ G C G+
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 315 DRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTL 374
A L M +V++++ LI+ + K + E LY M+ + P V TY +L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 375 FLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKN------------------ 416
GL ++ A ++F M RN N IYTT I G CK+
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 417 ------------GYIV-----KAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWE 459
GY + A E+F + + +I +YN L+DGLC +G++E A
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 460 LFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFI 519
+F + + + ++VTY I+I G+C G+++ A LF + +KG++PN + + T++ GF
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479
Query: 520 RNNETSKVIELLHRMDMRNVMPDAST 545
R + L +M +P+ S
Sbjct: 480 RRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 172/344 (50%), Gaps = 18/344 (5%)
Query: 225 NPNAVTYTSLICGFCYAN-----------------DWNEAKHLFIEMMDQGVQPNVVTFT 267
NP SL CGFC+ +N+A LF M+ P+++ FT
Sbjct: 29 NPRTAASLSL-CGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFT 87
Query: 268 VIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESN 327
++ + K + D L E M + G+ P T N ++ CL+ + RA M
Sbjct: 88 RLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKL 147
Query: 328 GCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHA 387
G D+V+++ L+NGYC +E+ + L+ ++L G +P VVTY TL L + + HA
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 388 LKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDG 447
++LF++M N N Y + GLC+ G A L R + + E N++++ LID
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 448 LCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPN 507
K G+L A EL++ + ++ + DV TY +I+GLC G +D+A +F ME G PN
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 508 FVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
VI+ TL+ GF ++ +++ + M + V+ + T ++++
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 307 bits (787), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/542 (33%), Positives = 283/542 (52%), Gaps = 45/542 (8%)
Query: 41 RFKSSGEGDITTITPN--------DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYD 92
R SSG GD I N DA+ +F M+ RP P + FN L +AK K +D
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFD 102
Query: 93 TVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDV 152
V+SL +++ G+ +LY YNILINCF C S+I A AL K+ G EP +
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCF-------CRRSQISLALALLGKMMKLGYEPSI 155
Query: 153 FTYNTLINGLCRTGHTIVALNLFEEMA----------------------NGNGEIGVV-- 188
T ++L+NG C A+ L ++M + + +V
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 215
Query: 189 -----CKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYAND 243
C+P+ VTY +++GLCK+G +D A L KM+ I N V Y+++I C
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 244 WNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNT 303
++A +LF EM ++GV+PNV+T++ ++ LC + ASRLL MI R + P+ T+N
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 304 LIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKG 363
LID + GK+ A +L+ M D+ +YS LING+C ++E +++ M+SK
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 364 IRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAV 423
P VVTY+TL G + +++ ++LF EM + + NT YTT I G + A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 424 ELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGL 483
+F+ + NI++YN L+DGLCK+G+LE A +F L R + + TYNIMI G+
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 484 CNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDA 543
C G+++ LF + KG++P+ +I+NT++ GF R + L +M +PD+
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Query: 544 ST 545
T
Sbjct: 576 GT 577
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 211/407 (51%), Gaps = 6/407 (1%)
Query: 150 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFV 209
P +F +N L++ + + + ++L E+M +G+ + TY +I+ C++ +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQI 136
Query: 210 DKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVI 269
A L KM P+ VT +SL+ G+C+ ++A L +M++ G +P+ +TFT +
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 270 MDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGC 329
+ L + K A L++ M+ RG +P+ TY +++G C G ID A L ME+
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 330 MHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALK 389
+VV YS +I+ CK + ++ LNL+ +M +KG+RP V+TY +L L + A +
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 390 LFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLC 449
L +M + N + ID K G +V+A +L+ + + +I +Y+ LI+G C
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 450 KHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFV 509
H RL+ A +F + +VVTYN +I+G C ++D+ LF +M +GL N V
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 510 IFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
+ TL+ GF + + + +M V P+ T + ++D L KN
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 162/348 (46%), Gaps = 21/348 (6%)
Query: 225 NPNAVTYTSLICGFCY--------ANDWNE-------------AKHLFIEMMDQGVQPNV 263
NP + +CG CY + D+ E A LF M+ P++
Sbjct: 26 NPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSI 85
Query: 264 VTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVS 323
F ++ + K K D L E M G+ + TYN LI+ +C +I A L
Sbjct: 86 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 145
Query: 324 MESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQ 383
M G +V+ S L+NGYC K + + + L +M+ G RP +T+ TL GLF ++
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 384 VEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNC 443
A+ L D M + N Y ++GLCK G I A L + K E N+V Y+
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 444 LIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKG 503
+ID LCK+ + A LF+ + G+ +V+TY+ +I LCN + A L DM +
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 504 LEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
+ PN V FN L+ F++ + + +L M R++ PD T S +++
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 173/377 (45%), Gaps = 35/377 (9%)
Query: 209 VDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTV 268
+D A LF M P+ + L+ ++ L +M G+ N+ T+ +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 269 IMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNG 328
+++ C+ ++ A LL M+ G +P T ++L++GYC +I A L M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 329 CMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHAL 388
D ++++ LI+G E + L +M+ +G +P +VTY + GL + ++ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 389 KLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTL------------------- 429
L ++M + AN IY+T ID LCK + A+ LF +
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 430 ----------RIL------KYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADV 473
R+L K N+V++N LID K G+L A +L+ + + + D+
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 474 VTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHR 533
TY+ +I+G C ++D+A +F M +K PN V +NTL+ GF + + +EL
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 534 MDMRNVMPDASTLSIVV 550
M R ++ + T + ++
Sbjct: 426 MSQRGLVGNTVTYTTLI 442
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 281/527 (53%), Gaps = 36/527 (6%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
+DA+ +F M+ RP P + F+ L +AK +D V+SL +++ + G+ +LY Y+I
Sbjct: 57 DDAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 116 LINCF------------------LQNGSSL----------CVESRIMEAAALFTKLRVFG 147
IN F L G S+ C +RI EA AL ++ G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 148 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKG 207
+PD T+ TL++GL + A+ L E M C+PD VTY +I+GLCK+G
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLVTYGAVINGLCKRG 229
Query: 208 FVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFT 267
D A L KM+ I + V Y ++I G C ++A LF +M +G++P+V T+
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 268 VIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSM-ES 326
++ LC G+ ASRLL M+ + + PD +N LID + GK+ A +L+ M +S
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 327 NGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEH 386
C DVV+Y+ LI G+CK K VEEG+ ++R+M +G+ VTY TL G F+ ++
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 387 ALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLID 446
A +F +M + V + Y +DGLC NG + A+ +F ++ +L+IV+Y +I+
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 447 GLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEP 506
LCK G++E W+LF SL G+ +VVTY M+ G C G ++A LF++M+ G P
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529
Query: 507 NFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
N +NTL+ +R+ + + EL+ M DAST +V ++L
Sbjct: 530 NSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 221/428 (51%), Gaps = 13/428 (3%)
Query: 132 RIMEAAALF---TKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVV 188
++ +A LF K R F P + ++ L++ + + + ++L E+M N +G+
Sbjct: 55 KLDDAIGLFGDMVKSRPF---PSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI- 106
Query: 189 CKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAK 248
+ TY+ I+ C++ + A + KM P+ VT SL+ GFC+ N +EA
Sbjct: 107 -SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 249 HLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGY 308
L +M++ G QP+ VTFT ++ L ++ K A L+E M+++G +PD TY +I+G
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 309 CLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTV 368
C G+ D A L ME DVV Y+ +I+G CK K +++ +L+ KM +KGI+P V
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 369 VTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRT 428
TY+ L L + A +L +M ++ + + ID K G +V+A +L+
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 429 LRILKYEL-NIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDG 487
+ K+ ++V+YN LI G CK+ R+E E+F + + GL+ + VTY +IHG
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 488 QMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLS 547
D A +F M + G+ P+ + +N L+ G N + + M R++ D T +
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 548 IVVDLLVK 555
+++ L K
Sbjct: 466 TMIEALCK 473
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%)
Query: 437 NIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLF 496
+IV ++ L+ + K + ++ L + +G+ ++ TY+I I+ C Q+ A +
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 497 LDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
M G P+ V N+L+ GF N S+ + L+ +M PD T + +V L ++
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 557 EISLNSIPQFKR 568
+ ++ +R
Sbjct: 194 NKASEAVALVER 205
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 301 bits (772), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 168/452 (37%), Positives = 251/452 (55%), Gaps = 14/452 (3%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
+D+L +F +M+ RP P + F+ L ++K K YD V+ L++++ G+ +L NI
Sbjct: 63 DDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
L+NCF C S++ A + K+ G EP + T+ +L+NG CR AL +F
Sbjct: 122 LLNCF-------CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 176 EEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLI 235
++M +G+ KP+ V Y TIIDGLCK VD A +L +M+ + I P+ VTY SLI
Sbjct: 175 DQM------VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 236 CGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVK 295
G C + W++A + M + + P+V TF ++D K G++ A E MI R +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 296 PDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNL 355
PD TY+ LI G C+ ++D A E+F M S GC DVV+YSILINGYCK+K VE G+ L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 356 YRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCK 415
+ +M +G+ VTY L G ++ A ++F M V N Y + GLC
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 416 NGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVT 475
NG I KA+ + ++ + +IV+YN +I G+CK G + AW+++ SL GLM D+ T
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 476 YNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPN 507
Y M+ GL G +A LF M+ G+ PN
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 216/421 (51%), Gaps = 6/421 (1%)
Query: 150 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFV 209
P + ++ L++ + + V + L+E+M +G+ + T +++ C+ +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQ----MLGI--PHNLCTCNILLNCFCRCSQL 132
Query: 210 DKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVI 269
A KM P+ VT+ SL+ GFC + +A ++F +M+ G +PNVV + I
Sbjct: 133 SLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 270 MDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGC 329
+D LCK+ ++D A LL M G+ PD TYN+LI G C +G+ A + M
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 330 MHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALK 389
DV +++ LI+ K V E Y +M+ + + P +VTY L GL +++ A +
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 390 LFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLC 449
+F M + Y+ I+G CK+ + ++LF + N V+Y LI G C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 450 KHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFV 509
+ G+L +A E+F + G+ +++TYN+++HGLC++G+++KA + DM+ G++ + V
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 510 IFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKNEISLNSIPQFKRH 569
+N ++ G + E + ++ ++ + +MPD T + ++ L K + + F++
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 570 K 570
K
Sbjct: 493 K 493
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 176/348 (50%)
Query: 209 VDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTV 268
+D + +LF M P+ ++ L+ ++ +L+ +M G+ N+ T +
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 269 IMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNG 328
+++ C+ ++ A L MI G +P T+ +L++G+C ++ A +F M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 329 CMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHAL 388
+VV Y+ +I+G CK+K V+ L+L +M GI P VVTY++L GL + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 389 KLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGL 448
++ M + + + + + ID K G + +A E + + + +IV+Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 449 CKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNF 508
C + RL+ A E+F + G DVVTY+I+I+G C +++ LF +M +G+ N
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 509 VIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
V + L+ G+ R + + E+ RM V P+ T ++++ L N
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 151/323 (46%), Gaps = 15/323 (4%)
Query: 235 ICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGV 294
ICGFC++ + EM+ G+ + K+D + L M+
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGI---------------RFMKLDDSLDLFFHMVQCRP 77
Query: 295 KPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLN 354
P + ++ L+ K D L+ M+ G H++ + +IL+N +C+ + L+
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 355 LYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLC 414
KM+ G P++VT+ +L G +V AL +FD+M N IY T IDGLC
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 415 KNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVV 474
K+ + A++L + ++V+YN LI GLC GR A + S + + + DV
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 475 TYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRM 534
T+N +I +G++ +A + +M + L+P+ V ++ L+ G + + E+ M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 535 DMRNVMPDASTLSIVVDLLVKNE 557
+ PD T SI+++ K++
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSK 340
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 268/484 (55%), Gaps = 21/484 (4%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
N+AL +F +M+ RP P + F L +AK K +D V++L L G+ DLY N+
Sbjct: 54 NEALDLFTHMVESRP-LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
L+NCF C S+ A++ K+ G EPD+ T+ +LING C A+++
Sbjct: 113 LMNCF-------CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 176 EEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLI 235
+M E+G+ KPD V YTTIID LCK G V+ A LF +M++ I P+ V YTSL+
Sbjct: 166 NQMV----EMGI--KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 236 CGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVK 295
G C + W +A L M + ++P+V+TF ++D K GK A L MI +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 296 PDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNL 355
P+ TY +LI+G+C+ G +D AR++F ME+ GC DVV+Y+ LING+CK K V++ + +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 356 YRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCK 415
+ +M KG+ +TY TL G +V + A ++F M V N Y + LC
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 416 NGYIVKAVELFRTLRILKYEL-----NIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLM 470
NG + KA+ +F ++ K E+ NI +YN L+ GLC +G+LE A +F + + +
Sbjct: 400 NGKVKKALMIFEDMQ--KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Query: 471 ADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIEL 530
++TY I+I G+C G++ A LF + +KG++PN V + T++ G R + L
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 531 LHRM 534
+M
Sbjct: 518 FRKM 521
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 182/348 (52%), Gaps = 17/348 (4%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
N AL +FD M N RP V + L L + + SL + + + PD+ +N
Sbjct: 194 NYALSLFDQMENY-GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
LI+ F++ G + ++A L+ ++ P++FTY +LING C G A +F
Sbjct: 253 LIDAFVKEG-------KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 176 EEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLI 235
M C PD V YT++I+G CK VD A ++F +M + + N +TYT+LI
Sbjct: 306 YLMETKG------CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 236 CGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILR--- 292
GF N A+ +F M+ +GV PN+ T+ V++ LC NGK+ A + E M R
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 293 GVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEG 352
GV P+ TYN L+ G C GK+++A +F M +++Y+I+I G CK V+
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 353 LNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVA 400
+NL+ + SKG++P VVTY T+ GLF A LF +M+ + V+
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 195/389 (50%), Gaps = 9/389 (2%)
Query: 171 ALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVT 230
AL+LF M P + +T +++ + K D L ++ ++ + T
Sbjct: 56 ALDLFTHMVESRP------LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 231 YTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMI 290
L+ FC ++ A +MM G +P++VTFT +++ C +M+ A ++ M+
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 291 LRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVE 350
G+KPD Y T+ID C G ++ A LF ME+ G DVV Y+ L+NG C +
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 351 EGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFI 410
+ +L R M + I+P V+T++ L + + A +L++EM R +A N + YT+ I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 411 DGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLM 470
+G C G + +A ++F + ++V+Y LI+G CK +++ A ++F + + GL
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 471 ADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSK---V 527
+ +TY +I G G+ + A +F M ++G+ PN +N L+ N + K +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 528 IELLHRMDMRNVMPDASTLSIVVDLLVKN 556
E + + +M V P+ T ++++ L N
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 166/309 (53%)
Query: 243 DWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYN 302
+NEA LF M++ P+++ FT +++ + K K D L + + + GV D T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 303 TLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSK 362
L++ +C + + A M G D+V+++ LING+C +EE +++ +M+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 363 GIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKA 422
GI+P VV Y T+ L + V +AL LFD+M + + +YT+ ++GLC +G A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 423 VELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHG 482
L R + K + +++++N LID K G+ A EL++ + R+ + ++ TY +I+G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 483 LCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPD 542
C +G +D+A +F ME KG P+ V + +L+ GF + + +++ + M + + +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 543 ASTLSIVVD 551
T + ++
Sbjct: 352 TITYTTLIQ 360
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 170/347 (48%)
Query: 210 DKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVI 269
++A +LF M + P+ + +T L+ ++ +L + GV ++ T ++
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 270 MDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGC 329
M+ C++ + AS L M+ G +PD T+ +LI+G+CL +++ A + M G
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 330 MHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALK 389
DVV Y+ +I+ CK V L+L+ +M + GIRP VV Y +L GL + A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 390 LFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLC 449
L M + + + + ID K G + A EL+ + + NI +Y LI+G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 450 KHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFV 509
G ++ A ++F + G DVV Y +I+G C ++D A +F +M KGL N +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 510 IFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
+ TL+ GF + + + E+ M R V P+ T ++++ L N
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 107/229 (46%), Gaps = 10/229 (4%)
Query: 337 SILINGYCKTKDV----------EEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEH 386
S + +C +++ E L+L+ M+ P+++ + L + ++ + +
Sbjct: 31 SFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDV 90
Query: 387 ALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLID 446
+ L D ++ V+ + Y ++ C++ A + L +E +IV++ LI+
Sbjct: 91 VINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLIN 150
Query: 447 GLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEP 506
G C R+E A + + + +G+ DVV Y +I LC +G ++ A LF ME G+ P
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP 210
Query: 507 NFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVK 555
+ V++ +L+ G + LL M R + PD T + ++D VK
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 291 bits (745), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 259/466 (55%), Gaps = 17/466 (3%)
Query: 39 RERFKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLF 98
RE+ ++ G + +I DA +F M++ +P P + F L A + Y+TV+
Sbjct: 39 REKLRT---GFLHSIRFEDAFALFFEMVHSQP-LPSIVDFTRLLTATANLRRYETVIYFS 94
Query: 99 KRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTL 158
+++ G+ DLY++ ILI+CF C SR+ A ++ K+ G EP + T+ +L
Sbjct: 95 QKMELYGISHDLYSFTILIHCF-------CRCSRLSFALSVLGKMMKLGYEPSIVTFGSL 147
Query: 159 INGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLK 218
++G C A +L M E P+ V Y T+IDGLCK G ++ A EL +
Sbjct: 148 LHGFCLVNRIGDAFSLVILMVKSGYE------PNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 219 MKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGK 278
M+ + + + VTY +L+ G CY+ W++A + +MM + + P+VVTFT ++D K G
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 279 MDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSI 338
+D A L + MI V P+ TYN++I+G C+ G++ A++ F M S GC +VV+Y+
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 339 LINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNH 398
LI+G+CK + V+EG+ L+++M +G + TY+TL G +V ++ AL +F M
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 399 VAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAW 458
V + + + GLC NG I A+ F +R + + IV+YN +I GLCK ++E AW
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441
Query: 459 ELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGL 504
ELF LP G+ D TY IMI GLC +G +A L M+ +G+
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 193/365 (52%)
Query: 192 DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
D ++T +I C+ + A + KM P+ VT+ SL+ GFC N +A L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLT 311
I M+ G +PNVV + ++D LCKNG+++ A LL M +G+ D TYNTL+ G C +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 312 GKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTY 371
G+ A + M DVV+++ LI+ + K +++E LY++M+ + P VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 372 HTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRI 431
+++ GL ++ A K FD M N Y T I G CK + + ++LF+ +
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 432 LKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDK 491
+ +I +YN LI G C+ G+L +A ++F + + D++T+ I++HGLC +G+++
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 492 AHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
A F DM V +N ++ G + ++ K EL R+ + V PDA T +I++
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 552 LLVKN 556
L KN
Sbjct: 465 GLCKN 469
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 173/350 (49%), Gaps = 1/350 (0%)
Query: 210 DKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVI 269
+ A LF +M P+ V +T L+ + + +M G+ ++ +FT++
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 270 MDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGC 329
+ C+ ++ A +L M+ G +P T+ +L+ G+CL +I A L + M +G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 330 MHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALK 389
+VV Y+ LI+G CK ++ L L +M KG+ VVTY+TL GL + A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 390 LFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLC 449
+ +M + + + +T ID K G + +A EL++ + + N V+YN +I+GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 450 KHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFV 509
HGRL A + F + G +VVTYN +I G C +D+ LF M +G +
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 510 IFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVV-DLLVKNEI 558
+NTL+ G+ + + +++ M R V PD T I++ L V EI
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 153/314 (48%)
Query: 237 GFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKP 296
GF ++ + +A LF EM+ P++V FT ++ + + + M L G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 297 DTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLY 356
D ++ LI +C ++ A + M G +V++ L++G+C + + +L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 357 RKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKN 416
M+ G P VV Y+TL GL + ++ AL+L +EM + + A+ Y T + GLC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 417 GYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTY 476
G A + R + ++V++ LID K G L+ A EL+ + + + + VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 477 NIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDM 536
N +I+GLC G++ A F M +KG PN V +NTL+ GF + + ++L RM
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 537 RNVMPDASTLSIVV 550
D T + ++
Sbjct: 345 EGFNADIFTYNTLI 358
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%)
Query: 339 LINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNH 398
L G+ + E+ L+ +M+ P++V + L + + E + +M
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 399 VAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAW 458
++ + Y +T I C+ + A+ + + L YE +IV++ L+ G C R+ A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 459 ELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGF 518
L + + G +VV YN +I GLC +G+++ A L +ME KGL + V +NTL+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 519 IRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
+ S +L M R++ PD T + ++D+ VK
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 275/500 (55%), Gaps = 22/500 (4%)
Query: 32 ASLETFLRERFKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHY 91
AS RER ++ ++ I +DA +F ML RP P + F + +AK +
Sbjct: 41 ASHHHHYRERLRN----ELHCIKFDDAFSLFCEMLQSRPI-PSIVDFTRVLTVIAKMNKF 95
Query: 92 DTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPD 151
D V+ L+ ++ + G+ DLY++ ILI+CF C SR+ A AL K+ G P
Sbjct: 96 DIVIYLYHKMENLGISHDLYSFTILIHCF-------CRCSRLSLALALLGKMMKLGFRPS 148
Query: 152 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDK 211
+ T +L+NG C+ A++L + M +G G + P+ V Y T+I+GLCK ++
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSM-DGFGFV-----PNVVIYNTVINGLCKNRDLNN 202
Query: 212 AKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMD 271
A E+F M+ + I +AVTY +LI G + W +A L +M+ + + PNV+ FT ++D
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 272 ELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMH 331
K G + A L + MI R V P+ TYN+LI+G+C+ G + A+ +F M S GC
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 332 DVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLF 391
DVV+Y+ LI G+CK+K VE+G+ L+ +M +G+ TY+TL G + ++ A K+F
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 392 DEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKH 451
+ M V+ + Y +D LC NG I KA+ + L+ + +++I++YN +I GLC+
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 452 GRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIF 511
+L+ AW LF SL R G+ D + Y MI GLC G +A L M+ G P+ I+
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Query: 512 NTLMLGFIRNNETSKVIELL 531
+ + R++ TS EL+
Sbjct: 503 DETL----RDHYTSLSAELI 518
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 206/410 (50%), Gaps = 8/410 (1%)
Query: 135 EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTV 194
+A +LF ++ P + + ++ + + + + L+ +M N +G+ D
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMEN----LGI--SHDLY 115
Query: 195 TYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEM 254
++T +I C+ + A L KM P+ VT SL+ GFC N + EA L M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 255 MDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKI 314
G PNVV + +++ LCKN ++ A + M +G++ D TYNTLI G +G+
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 315 DRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTL 374
A L M +V+ ++ LI+ + K ++ E NLY++M+ + + P V TY++L
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 375 FLGLFEVHQ-VEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILK 433
G F +H + A +FD M + Y T I G CK+ + ++LF +
Sbjct: 296 ING-FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 434 YELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAH 493
+ +YN LI G C+ G+L +A ++F+ + G+ D+VTYNI++ LCN+G+++KA
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 494 GLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDA 543
+ D++ ++ + + +N ++ G R ++ + L + + V PDA
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 180/367 (49%)
Query: 191 PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHL 250
P V +T ++ + K D L+ KM++ I+ + ++T LI FC + + A L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 251 FIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCL 310
+MM G +P++VT +++ C+ + A L++ M G P+ YNT+I+G C
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 311 TGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVT 370
++ A E+F ME G D V+Y+ LI+G + + L R M+ + I P V+
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 371 YHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLR 430
+ L + + A L+ EM R V N + Y + I+G C +G + A +F +
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 431 ILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMD 490
++V+YN LI G CK R+E +LF + GL+ D TYN +IHG C G+++
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 491 KAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVV 550
A +F M G+ P+ V +N L+ N + K + ++ + + D T +I++
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 551 DLLVKNE 557
L + +
Sbjct: 437 QGLCRTD 443
Score = 165 bits (418), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 178/347 (51%)
Query: 210 DKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVI 269
D A LF +M P+ V +T ++ N ++ +L+ +M + G+ ++ +FT++
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 270 MDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGC 329
+ C+ ++ A LL M+ G +P T +L++G+C + A L SM+ G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 330 MHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALK 389
+ +VV Y+ +ING CK +D+ L ++ M KGIR VTY+TL GL + A +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 390 LFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLC 449
L +M + + N +T ID K G +++A L++ + N+ +YN LI+G C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 450 KHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFV 509
HG L A +F + G DVVTYN +I G C +++ LF +M +GL +
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 510 IFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
+NTL+ G+ + + + ++ +RM V PD T +I++D L N
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 151/307 (49%)
Query: 244 WNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNT 303
+++A LF EM+ P++V FT ++ + K K D L M G+ D ++
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 304 LIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKG 363
LI +C ++ A L M G +V+ L+NG+C+ +E ++L M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 364 IRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAV 423
P VV Y+T+ GL + + +AL++F M + + A+ Y T I GL +G A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 424 ELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGL 483
L R + K + N++ + LID K G L A L+ + R ++ +V TYN +I+G
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 484 CNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDA 543
C G + A +F M +KG P+ V +NTL+ GF ++ ++L M + ++ DA
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 544 STLSIVV 550
T + ++
Sbjct: 360 FTYNTLI 366
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%)
Query: 437 NIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLF 496
+IV + ++ + K + +I L+ + +G+ D+ ++ I+IH C ++ A L
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 497 LDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
M G P+ V +L+ GF + N + + L+ MD +P+ + V++ L KN
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 557 EISLNSIPQF 566
N++ F
Sbjct: 198 RDLNNALEVF 207
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 259/485 (53%), Gaps = 19/485 (3%)
Query: 23 SLRLTVKDRASLETFLRERFKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILF 82
SLR+ S + RER +S + +I NDAL +F M P P + F+ L
Sbjct: 32 SLRICNSRAFSGRSDYRERLRSG----LHSIKFNDALTLFCDMAESHP-LPSIVDFSRLL 86
Query: 83 GCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTK 142
+AK Y+ V+SLF+ L G+ DLY++ LI+CF C +R+ A + K
Sbjct: 87 IAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCF-------CRCARLSLALSCLGK 139
Query: 143 LRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDG 202
+ G EP + T+ +L+NG C A++L +++ +G+ +P+ V Y TIID
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI------VGLGYEPNVVIYNTIIDS 193
Query: 203 LCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPN 262
LC+KG V+ A ++ MK I P+ VTY SLI ++ W + + +MM G+ P+
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253
Query: 263 VVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFV 322
V+TF+ ++D K G++ A + MI R V P+ TYN+LI+G C+ G +D A+++
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 323 SMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVH 382
+ S G + V+Y+ LINGYCK K V++G+ + M G+ TY+TL+ G +
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 383 QVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYN 442
+ A K+ M V + Y + +DGLC +G I KA+ L+ K + I++YN
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433
Query: 443 CLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAK 502
+I GLCK ++E AW LF SL G+ DV+TY M+ GL +AH L+ M+ +
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Query: 503 -GLEP 506
GL P
Sbjct: 494 DGLMP 498
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 197/411 (47%), Gaps = 6/411 (1%)
Query: 135 EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTV 194
+A LF + P + ++ L+ + + ++LF + +G+ D
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE----MLGI--SHDLY 115
Query: 195 TYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEM 254
++TT+ID C+ + A KM P+ VT+ SL+ GFC+ N + EA L ++
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 255 MDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKI 314
+ G +PNVV + I+D LC+ G+++ A +L+ M G++PD TYN+LI +G
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 315 DRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTL 374
+ + M G DV+++S LI+ Y K + E Y +M+ + + P +VTY++L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 375 FLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKY 434
GL ++ A K+ + + N Y T I+G CK + +++ +
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 435 ELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHG 494
+ + +YN L G C+ G+ A ++ + G+ D+ T+NI++ GLC+ G++ KA
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 495 LFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDAST 545
D++ + +N ++ G + ++ L + ++ V PD T
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVIT 466
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 200/433 (46%), Gaps = 10/433 (2%)
Query: 129 VESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTG-HTIV---ALNLFEEMANGNGE 184
+ ++E L T L + C F+ + R+G H+I AL LF +MA +
Sbjct: 17 LHRHLLEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHP- 75
Query: 185 IGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDW 244
P V ++ ++ + K + LF ++ I+ + ++T+LI FC
Sbjct: 76 -----LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARL 130
Query: 245 NEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTL 304
+ A +MM G +P++VTF +++ C + A L++ ++ G +P+ YNT+
Sbjct: 131 SLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTI 190
Query: 305 IDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGI 364
ID C G+++ A ++ M+ G DVV+Y+ LI + + M+ GI
Sbjct: 191 IDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGI 250
Query: 365 RPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVE 424
P V+T+ L + Q+ A K ++EM + V N Y + I+GLC +G + +A +
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310
Query: 425 LFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLC 484
+ L + N V+YN LI+G CK R++ ++ + R G+ D TYN + G C
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370
Query: 485 NDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDAS 544
G+ A + M + G+ P+ FN L+ G + + K + L + +
Sbjct: 371 QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII 430
Query: 545 TLSIVVDLLVKNE 557
T +I++ L K +
Sbjct: 431 TYNIIIKGLCKAD 443
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%)
Query: 351 EGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFI 410
+ L L+ M P++V + L + + ++++ E + LF + ++ + Y +TT I
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 411 DGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLM 470
D C+ + A+ + L +E +IV++ L++G C R A L + +G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 471 ADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIEL 530
+VV YN +I LC GQ++ A + M+ G+ P+ V +N+L+ + +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 531 LHRMDMRNVMPDASTLSIVVDLLVKNEISLNSIPQF 566
L M + PD T S ++D+ K L + Q+
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY 277
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/588 (29%), Positives = 280/588 (47%), Gaps = 80/588 (13%)
Query: 30 DRASLETFLRERFKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTK 89
D S T + FK EGD + A + ML+ R P V ++N + L K +
Sbjct: 195 DVVSYTTVINGFFK---EGD-----SDKAYSTYHEMLD-RGILPDVVTYNSIIAALCKAQ 245
Query: 90 HYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCE 149
D + + + G+ PD YN +++ + C + EA K+R G E
Sbjct: 246 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGY-------CSSGQPKEAIGFLKKMRSDGVE 298
Query: 150 PDVFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGEIGVVCK---- 190
PDV TY+ L++ LC+ G + A +F+ M G G + +
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 358
Query: 191 ----------PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVT---------- 230
PD ++ +I K+G VD+A +F KM+ + +NPNAVT
Sbjct: 359 LDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCK 418
Query: 231 -------------------------YTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVT 265
Y SLI G C N W A+ L +EM+D+G+ N +
Sbjct: 419 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478
Query: 266 FTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSME 325
F I+D CK G++ + +L ELM+ GVKP+ TYNTLI+GYCL GK+D A +L M
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 326 SNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVE 385
S G + V+YS LINGYCK +E+ L L+++M S G+ P ++TY+ + GLF+ +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 386 HALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLI 445
A +L+ + + Y + GLCKN A+++F+ L ++ +L ++N +I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Query: 446 DGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLE 505
D L K GR + A +LF + GL+ + TY +M + G +++ LFL ME G
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 718
Query: 506 PNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
+ + N ++ ++ E ++ L +D ++ +AST S+ +DLL
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 766
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 273/526 (51%), Gaps = 51/526 (9%)
Query: 80 ILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAAL 139
+L G A + D + + +R+ G P++++YNIL+ LC E+R EA L
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLK-------GLCDENRSQEALEL 180
Query: 140 FTKL---RVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTY 196
+ R G PDV +Y T+ING + G + A + + EM + G++ PD VTY
Sbjct: 181 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR----GIL--PDVVTY 234
Query: 197 TTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMD 256
+II LCK +DKA E+ M + P+ +TY S++ G+C + EA +M
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294
Query: 257 QGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCL------ 310
GV+P+VVT++++MD LCKNG+ A ++ + M RG+KP+ +TY TL+ GY
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354
Query: 311 -----------------------------TGKIDRARELFVSMESNGCMHDVVSYSILIN 341
GK+D+A +F M G + V+Y +I
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 342 GYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAA 401
CK+ VE+ + + +M+ +G+ P + Y++L GL ++ E A +L EM +
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 402 NTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELF 461
NT + + ID CK G ++++ +LF + + + N+++YN LI+G C G+++ A +L
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 462 SSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRN 521
S + VGL + VTY+ +I+G C +M+ A LF +ME+ G+ P+ + +N ++ G +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 522 NETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKNEISLNSIPQFK 567
T+ EL R+ + ST +I++ L KN+++ +++ F+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 206/494 (41%), Gaps = 84/494 (17%)
Query: 135 EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTV 194
+A +F +L G ++ N + + R A++ + MA + PD
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGAD---EVTPDLC 88
Query: 195 TYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCY-------------- 240
TY +I C+ G +D + + +A+ +T L+ G C
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 241 ----------------------ANDWNEAKHLFIEMMDQ---GVQPNVVTFTVIMDELCK 275
N EA L M D G P+VV++T +++ K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 276 NGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVS 335
G D A M+ RG+ PD TYN++I C +D+A E+ +M NG M D ++
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 336 YSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMR 395
Y+ +++GYC + +E + +KM S G+ P VVTY L L + + A K+FD M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 396 -----------------------------------RNHVAANTYIYTTFIDGLCKNGYIV 420
RN + + Y+++ I K G +
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 421 KAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMI 480
+A+ +F +R N V+Y +I LCK GR+E A F + GL + YN +I
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 481 HGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNN---ETSKVIELLHRMDMR 537
HGLC + ++A L L+M +G+ N + FN+++ + E+ K+ EL+ R+
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI--- 505
Query: 538 NVMPDASTLSIVVD 551
V P+ T + +++
Sbjct: 506 GVKPNVITYNTLIN 519
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 385 EHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYEL--NIVSYN 442
E A +FDE+ R A+ Y + + ++ R R E+ ++ +Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 443 CLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFL-DMEA 501
LI C+ GRL++ + ++ + G D + + ++ GLC D + A + L M
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 502 KGLEPNFVIFNTLMLGFIRNNETSKVIELLHRM-DMR--NVMPDASTLSIVVDLLVK 555
G PN +N L+ G N + + +ELLH M D R PD + + V++ K
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 252/482 (52%), Gaps = 19/482 (3%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNG---SSLC 128
+P V++FN+L L + + + + + S GL PD + ++ +++ G +L
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 129 VESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVV 188
+ +++E FGC + N +++G C+ G ALN +EM+N +G
Sbjct: 246 IREQMVE----------FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF--- 292
Query: 189 CKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAK 248
PD T+ T+++GLCK G V A E+ M E +P+ TY S+I G C + EA
Sbjct: 293 --PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 249 HLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGY 308
+ +M+ + PN VT+ ++ LCK +++ A+ L ++ +G+ PD T+N+LI G
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 309 CLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTV 368
CLT A ELF M S GC D +Y++LI+ C ++E LN+ ++M G +V
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 369 VTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRT 428
+TY+TL G + ++ A ++FDEM + V+ N+ Y T IDGLCK+ + A +L
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 429 LRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQ 488
+ + + + +YN L+ C+ G ++ A ++ ++ G D+VTY +I GLC G+
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 489 MDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRN-VMPDASTLS 547
++ A L ++ KG+ +N ++ G R +T++ I L M +N PDA +
Sbjct: 591 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 650
Query: 548 IV 549
IV
Sbjct: 651 IV 652
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 254/510 (49%), Gaps = 23/510 (4%)
Query: 47 EGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRL-NSTG 105
EGD+ + AL + + M+ S V S N++ K + L+ + + N G
Sbjct: 237 EGDL-----DGALRIREQMVEFGCSWSNV-SVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 106 LFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRT 165
FPD Y +N L+N LC + A + + G +PDV+TYN++I+GLC+
Sbjct: 291 FFPDQYTFNTLVN-------GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 166 GHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENIN 225
G A+ + ++M + C P+TVTY T+I LCK+ V++A EL + + I
Sbjct: 344 GEVKEAVEVLDQMITRD------CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 226 PNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRL 285
P+ T+ SLI G C + A LF EM +G +P+ T+ +++D LC GK+D A +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 286 LELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCK 345
L+ M L G TYNTLIDG+C K A E+F ME +G + V+Y+ LI+G CK
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 346 TKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYI 405
++ VE+ L +M+ +G +P TY++L ++ A + M N +
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 406 YTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSS-L 464
Y T I GLCK G + A +L R++++ L +YN +I GL + + A LF L
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 465 PRVGLMADVVTYNIMIHGLCN-DGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNE 523
+ D V+Y I+ GLCN G + +A +++ KG P F L G + +
Sbjct: 638 EQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSM 697
Query: 524 TSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
+++L++ M M+ +S+V LL
Sbjct: 698 EETLVKLVN-MVMQKARFSEEEVSMVKGLL 726
Score = 235 bits (599), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 179/601 (29%), Positives = 282/601 (46%), Gaps = 79/601 (13%)
Query: 2 PTSSISKNEP---SYPTTTAKLKESLRLTVKDRASLETFLRERFKSSGEGDITTITPNDA 58
P+S+IS P + +T KL +SLR D A+L F K + +P A
Sbjct: 32 PSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPN-------FSPEPA 84
Query: 59 L-----------CVFDYML----NMRPSRPPV--TSFNILFGCLAKTKHYDTVLSLFKRL 101
L FD M +M+ SR + ++F IL A+ + D +LS+ +
Sbjct: 85 LYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWM 144
Query: 102 -NSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLIN 160
+ GL PD + YN ++N L +G+SL +++E + K+ V+G +PDV T+N LI
Sbjct: 145 IDEFGLKPDTHFYNRMLN-LLVDGNSL----KLVEIS--HAKMSVWGIKPDVSTFNVLIK 197
Query: 161 GLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTT---------------------- 198
LCR A+ + E+M + G+V PD T+TT
Sbjct: 198 ALCRAHQLRPAILMLEDMPS----YGLV--PDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 199 -------------IIDGLCKKGFVDKAKELFLKMKDEN-INPNAVTYTSLICGFCYANDW 244
I+ G CK+G V+ A +M +++ P+ T+ +L+ G C A
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 245 NEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTL 304
A + M+ +G P+V T+ ++ LCK G++ A +L+ MI R P+T TYNTL
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 305 IDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGI 364
I C +++ A EL + S G + DV +++ LI G C T++ + L+ +M SKG
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 365 RPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVE 424
P TY+ L L +++ AL + +M + A + Y T IDG CK +A E
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 425 LFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLC 484
+F + + N V+YN LIDGLCK R+E A +L + G D TYN ++ C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 485 NDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMR--NVMPD 542
G + KA + M + G EP+ V + TL+ G + +LL + M+ N+ P
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 543 A 543
A
Sbjct: 612 A 612
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 156/382 (40%), Gaps = 75/382 (19%)
Query: 261 PNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYC---LTGKI--- 314
P + I+ L ++G D ++LE M + TST+ LI+ Y L +I
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 315 -----------------DRARELFV-------------SMESNGCMHDVVSYSILINGYC 344
+R L V M G DV ++++LI C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 345 KTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFE------------------------ 380
+ + + + M S G+ P T+ T+ G E
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 381 -----VH------QVEHALKLFDEMR-RNHVAANTYIYTTFIDGLCKNGYIVKAVELFRT 428
VH +VE AL EM ++ + Y + T ++GLCK G++ A+E+
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 429 LRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQ 488
+ Y+ ++ +YN +I GLCK G ++ A E+ + + VTYN +I LC + Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 489 MDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSI 548
+++A L + +KG+ P+ FN+L+ G +EL M + PD T ++
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 549 VVDLLV---KNEISLNSIPQFK 567
++D L K + +LN + Q +
Sbjct: 441 LIDSLCSKGKLDEALNMLKQME 462
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 248/482 (51%), Gaps = 40/482 (8%)
Query: 50 ITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPD 109
++ I +DA+ +F M RP P + F+ L +AK +D V+S +++ G+ +
Sbjct: 54 LSDIELDDAIGLFGVMAQSRPF-PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHN 112
Query: 110 LYAYNILINCF------------------------------LQNGSSLCVESRIMEAAAL 139
LY YNILINCF L NG C +RI +A AL
Sbjct: 113 LYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNG--FCHGNRISDAVAL 170
Query: 140 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTI 199
++ G +PD T+ TLI+GL A+ L + M C+PD VTY +
Sbjct: 171 VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG------CQPDLVTYGAV 224
Query: 200 IDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGV 259
++GLCK+G D A L KM+ I N V Y+++I C ++A +LF EM ++GV
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 260 QPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARE 319
+PNV+T++ ++ LC G+ ASRLL MI R + P+ T++ LID + GK+ +A +
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 320 LFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLF 379
L+ M ++ +YS LING+C + E + M+ K P VVTY+TL G
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 380 EVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIV 439
+ +V+ ++LF EM + + NT YTT I G + A +F+ + + NI+
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 440 SYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDM 499
+YN L+DGLCK+G+L A +F L R + D+ TYNIMI G+C G+ K G++
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW-KMGGIYFVA 523
Query: 500 EA 501
A
Sbjct: 524 SA 525
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 209/407 (51%), Gaps = 6/407 (1%)
Query: 150 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFV 209
P + ++ L++ + + + ++ E+M +G+ + TY +I+ C+ +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKME----ILGI--SHNLYTYNILINCFCRCSRL 129
Query: 210 DKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVI 269
A L KM P+ VT SL+ GFC+ N ++A L +M++ G +P+ VTFT +
Sbjct: 130 SLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTL 189
Query: 270 MDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGC 329
+ L + K A L++ M+ RG +PD TY +++G C G D A L ME+
Sbjct: 190 IHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249
Query: 330 MHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALK 389
+VV YS +I+ CK + ++ LNL+ +M +KG+RP V+TY +L L + A +
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 390 LFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLC 449
L +M + N ++ ID K G +VKA +L+ + + NI +Y+ LI+G C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 450 KHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFV 509
RL A ++ + R + +VVTYN +I+G C ++DK LF +M +GL N V
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 510 IFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
+ TL+ GF + + + +M V P+ T +I++D L KN
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 155/309 (50%)
Query: 243 DWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYN 302
+ ++A LF M P+++ F+ ++ + K K D E M + G+ + TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 303 TLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSK 362
LI+ +C ++ A L M G D+V+ + L+NG+C + + + L +M+
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 363 GIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKA 422
G +P VT+ TL GLF ++ A+ L D M + + Y ++GLCK G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 423 VELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHG 482
+ L + K E N+V Y+ +ID LCK+ + A LF+ + G+ +V+TY+ +I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 483 LCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPD 542
LCN G+ A L DM + + PN V F+ L+ F++ + K +L M R++ P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 543 ASTLSIVVD 551
T S +++
Sbjct: 358 IFTYSSLIN 366
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 172/347 (49%)
Query: 209 VDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTV 268
+D A LF M P+ + ++ L+ N ++ +M G+ N+ T+ +
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 269 IMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNG 328
+++ C+ ++ A LL M+ G +PD T N+L++G+C +I A L M G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 329 CMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHAL 388
D V+++ LI+G E + L +M+ +G +P +VTY + GL + + AL
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 389 KLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGL 448
L ++M + AN IY+T ID LCK + A+ LF + N+++Y+ LI L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 449 CKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNF 508
C +GR A L S + + ++VT++ +I G++ KA L+ +M + ++PN
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 509 VIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVK 555
+++L+ GF + + ++L M ++ +P+ T + +++ K
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 263 bits (671), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 243/463 (52%), Gaps = 14/463 (3%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESR 132
P S N L AK D V FK + G P ++ YNI+I+C +C E
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC-------MCKEGD 277
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPD 192
+ A LF +++ G PD TYN++I+G + G + FEEM + + C+PD
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD------MCCEPD 331
Query: 193 TVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFI 252
+TY +I+ CK G + E + +MK + PN V+Y++L+ FC +A ++
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 253 EMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTG 312
+M G+ PN T+T ++D CK G + A RL M+ GV+ + TY LIDG C
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 313 KIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYH 372
++ A ELF M++ G + ++ SY+ LI+G+ K K+++ L L ++ +GI+P ++ Y
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 373 TLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRIL 432
T GL + ++E A + +EM+ + AN+ IYTT +D K+G + + L ++ L
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 433 KYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPR-VGLMADVVTYNIMIHGLCNDGQMDK 491
E+ +V++ LIDGLCK+ + A + F+ + GL A+ + MI GLC D Q++
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 492 AHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRM 534
A LF M KGL P+ + +LM G + + + L +M
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 233/473 (49%), Gaps = 14/473 (2%)
Query: 71 SRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVE 130
+RP V ++NI+ C+ K + LF+ + GL PD YN +I+ F + G
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG------ 311
Query: 131 SRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCK 190
R+ + F +++ CEPDV TYN LIN C+ G + L + EM GNG K
Sbjct: 312 -RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LK 364
Query: 191 PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHL 250
P+ V+Y+T++D CK+G + +A + ++ M+ + PN TYTSLI C + ++A L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 251 FIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCL 310
EM+ GV+ NVVT+T ++D LC +M A L M GV P+ ++YN LI G+
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 311 TGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVT 370
+DRA EL ++ G D++ Y I G C + +E + +M GI+ +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 371 YHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELF-RTL 429
Y TL F+ L L DEM+ + + IDGLCKN + KAV+ F R
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 430 RILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQM 489
+ N + +IDGLCK ++E A LF + + GL+ D Y ++ G G +
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 490 DKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPD 542
+A L M G++ + + + +L+ G N+ K L M + PD
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 186/343 (54%), Gaps = 2/343 (0%)
Query: 188 VCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEA 247
VC P + + L G +++A + F KMK + P + L+ F ++
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 248 KHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDG 307
K F +M+ G +P V T+ +++D +CK G ++ A L E M RG+ PDT TYN++IDG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 308 YCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPT 367
+ G++D F M+ C DV++Y+ LIN +CK + GL YR+M G++P
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 368 VVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFR 427
VV+Y TL + ++ A+K + +MRR + N Y YT+ ID CK G + A L
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 428 TLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDG 487
+ + E N+V+Y LIDGLC R++ A ELF + G++ ++ +YN +IHG
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 488 QMDKAHGLFLDMEAKGLEPNFVIFNTLMLGF--IRNNETSKVI 528
MD+A L +++ +G++P+ +++ T + G + E +KV+
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 175/383 (45%), Gaps = 35/383 (9%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILI--NCFLQNGS---- 125
+P V S++ L K + + + GL P+ Y Y LI NC + N S
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 126 ----------------------SLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLC 163
LC R+ EA LF K+ G P++ +YN LI+G
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 164 RTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDEN 223
+ + AL L E+ G G KPD + Y T I GLC ++ AK + +MK+
Sbjct: 484 KAKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 224 INPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGAS 283
I N++ YT+L+ + + + E HL EM + ++ VVTF V++D LCKN + A
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 284 RLLELMILR-GVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILING 342
+ G++ + + + +IDG C +++ A LF M G + D +Y+ L++G
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 343 YCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAAN 402
K +V E L L KM G++ ++ Y +L GL +Q++ A +EM + +
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Query: 403 TYIYTTFIDGLCKNGYIVKAVEL 425
+ + + + G I +AVEL
Sbjct: 718 EVLCISVLKKHYELGCIDEAVEL 740
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 106/256 (41%), Gaps = 15/256 (5%)
Query: 323 SMESNGCMHDVVSYSILING-YCKTKDVEEGLNLYRKMLSKG--------------IRPT 367
SM NG H V SY I+ + +C + L +LSK P
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191
Query: 368 VVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFR 427
+ LF L ++ +E A++ F +M+R V T + K G F+
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 428 TLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDG 487
+ + +YN +ID +CK G +E A LF + GL+ D VTYN MI G G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 488 QMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLS 547
++D F +M+ EP+ + +N L+ F + + +E M + P+ + S
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 548 IVVDLLVKNEISLNSI 563
+VD K + +I
Sbjct: 372 TLVDAFCKEGMMQQAI 387
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 252/501 (50%), Gaps = 21/501 (4%)
Query: 57 DALCVFDYMLNMRPSRPPVTSFNILFGC-------LAKTKHYDTVLSLFKRLNSTGLFPD 109
DAL V D M + ++ GC LA+ D + ++ + + P+
Sbjct: 158 DALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217
Query: 110 LYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTI 169
+Y YN ++N + + G+ + EA +K+ G +PD FTY +LI G C+
Sbjct: 218 IYTYNKMVNGYCKLGN-------VEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 170 VALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAV 229
A +F EM C+ + V YT +I GLC +D+A +LF+KMKD+ P
Sbjct: 271 SAFKVFNEMPLKG------CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 324
Query: 230 TYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELM 289
TYT LI C + +EA +L EM + G++PN+ T+TV++D LC K + A LL M
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 290 ILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDV 349
+ +G+ P+ TYN LI+GYC G I+ A ++ MES + +Y+ LI GYCK+ +V
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NV 443
Query: 350 EEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTF 409
+ + + KML + + P VVTY++L G + A +L M + + + YT+
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 410 IDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGL 469
ID LCK+ + +A +LF +L N+V Y LIDG CK G+++ A + +
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 470 MADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIE 529
+ + +T+N +IHGLC DG++ +A L M GL+P L+ +++ +
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 530 LLHRMDMRNVMPDASTLSIVV 550
+M PDA T + +
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFI 644
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 239/463 (51%), Gaps = 9/463 (1%)
Query: 94 VLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVF 153
VL L +++N F Y ++I C+ +SL + E ++ ++ P+++
Sbjct: 162 VLDLCRKMNKDERFE--LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIY 219
Query: 154 TYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAK 213
TYN ++NG C+ G+ A ++ E G+ PD TYT++I G C++ +D A
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIV----EAGL--DPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 214 ELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDEL 273
++F +M + N V YT LI G C A +EA LF++M D P V T+TV++ L
Sbjct: 274 KVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSL 333
Query: 274 CKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDV 333
C + + A L++ M G+KP+ TY LID C K ++AREL M G M +V
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 334 VSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDE 393
++Y+ LINGYCK +E+ +++ M S+ + P TY+ L G + + V A+ + ++
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNK 452
Query: 394 MRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGR 453
M V + Y + IDG C++G A L + + +Y +ID LCK R
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 454 LEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNT 513
+E A +LF SL + G+ +VV Y +I G C G++D+AH + M +K PN + FN
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 514 LMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
L+ G + + + L +M + P ST +I++ L+K+
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 231/482 (47%), Gaps = 15/482 (3%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESR 132
P ++ L + K D+ +F + G + AY LI+ LCV R
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH-------GLCVARR 303
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPD 192
I EA LF K++ C P V TY LI LC + ALNL +EM E G+ KP+
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME----ETGI--KPN 357
Query: 193 TVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFI 252
TYT +ID LC + +KA+EL +M ++ + PN +TY +LI G+C +A +
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 253 EMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTG 312
M + + PN T+ ++ CK+ + A +L M+ R V PD TYN+LIDG C +G
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 313 KIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYH 372
D A L M G + D +Y+ +I+ CK+K VEE +L+ + KG+ P VV Y
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 373 TLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRIL 432
L G + +V+ A + ++M + N+ + I GLC +G + +A L + +
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 433 KYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKA 492
+ + + LI L K G + A+ F + G D TY I C +G++ A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 493 HGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDAST-LSIVVD 551
+ M G+ P+ +++L+ G+ +T+ ++L RM P T LS++
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 552 LL 553
LL
Sbjct: 717 LL 718
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 235/473 (49%), Gaps = 31/473 (6%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESR 132
P V ++ +L L ++ L+L K + TG+ P+++ Y +LI+ SLC + +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID-------SLCSQCK 373
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPD 192
+A L ++ G P+V TYN LING C+ G A+++ E M + P+
Sbjct: 374 FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK------LSPN 427
Query: 193 TVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFI 252
T TY +I G CK V KA + KM + + P+ VTY SLI G C + +++ A L
Sbjct: 428 TRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 253 EMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTG 312
M D+G+ P+ T+T ++D LCK+ +++ A L + + +GV P+ Y LIDGYC G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 313 KIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYH 372
K+D A + M S C+ + ++++ LI+G C ++E L KM+ G++PTV T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 373 TLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRIL 432
L L + +HA F +M + + + YTTFI C+ G ++ A ++ +R
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 433 KYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKA 492
++ +Y+ LI G G+ A+++ + G T+ +I L ++
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL-----LEMK 721
Query: 493 HGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDAST 545
+G + KG EP + +M E V+ELL +M +V P+A +
Sbjct: 722 YG-----KQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHSVTPNAKS 762
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 227/527 (43%), Gaps = 54/527 (10%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNG------- 124
+P + ++ +L L ++ L ++ GL P++ YN LIN + + G
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 125 ---------------------SSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLC 163
C +S + +A + K+ PDV TYN+LI+G C
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 164 RTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDEN 223
R+G+ A L M N G + PD TYT++ID LCK V++A +LF ++ +
Sbjct: 474 RSGNFDSAYRLLSLM-NDRGLV-----PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 224 INPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGAS 283
+NPN V YT+LI G+C A +EA + +M+ + PN +TF ++ LC +GK+ A+
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 284 RLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGY 343
L E M+ G++P ST LI G D A F M S+G D +Y+ I Y
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 344 CKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANT 403
C+ + + ++ KM G+ P + TY +L G ++ Q A + MR +
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 404 YIYTTFIDGLCKNGYIVK------------------AVELFRTLRILKYELNIVSYNCLI 445
+ + + I L + Y + VEL + N SY LI
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 446 DGLCKHGRLEIAWELFSSLPR-VGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGL 504
G+C+ G L +A ++F + R G+ + +N ++ C + ++A + DM G
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 505 EPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
P L+ G + E + + + D I++D
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 182/430 (42%), Gaps = 53/430 (12%)
Query: 65 MLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNG 124
++N R P ++ + L K+K + LF L G+ P++ Y LI+ + + G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 125 S----------------------------SLCVESRIMEAAALFTKLRVFGCEPDVFTYN 156
LC + ++ EA L K+ G +P V T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 157 TLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELF 216
LI+ L + G A + F++M + KPD TYTT I C++G + A+++
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGT------KPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 217 LKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELC-- 274
KM++ ++P+ TY+SLI G+ N A + M D G +P+ TF ++ L
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Query: 275 KNGKMDGAS----------------RLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRAR 318
K GK G+ LLE M+ V P+ +Y LI G C G + A
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 319 ELFVSMESN-GCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLG 377
++F M+ N G + ++ L++ CK K E + M+ G P + + L G
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Query: 378 LFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELN 437
L++ + E +F + + + + IDG+ K G + ELF + + +
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFS 900
Query: 438 IVSYNCLIDG 447
+Y+ LI+G
Sbjct: 901 SQTYSLLIEG 910
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 248/493 (50%), Gaps = 24/493 (4%)
Query: 62 FDYMLNMR-----PSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNIL 116
F ++ NM P P T+ F L KT+ +L + L +G PD+ YN++
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI---LEGSGAVPDVITYNVM 178
Query: 117 INCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 176
I S C I A ++ ++ V PDV TYNT++ LC +G A+ + +
Sbjct: 179 I-------SGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 177 EMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLIC 236
M + C PD +TYT +I+ C+ V A +L +M+D P+ VTY L+
Sbjct: 229 RMLQRD------CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 237 GFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKP 296
G C +EA +M G QPNV+T +I+ +C G+ A +LL M+ +G P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 297 DTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLY 356
T+N LI+ C G + RA ++ M +GC + +SY+ L++G+CK K ++ +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 357 RKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKN 416
+M+S+G P +VTY+T+ L + +VE A+++ +++ + Y T IDGL K
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 417 GYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTY 476
G KA++L +R + + ++Y+ L+ GL + G+++ A + F R+G+ + VT+
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 477 NIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDM 536
N ++ GLC Q D+A + M +G +PN + L+ G + +ELL+ +
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Query: 537 RNVMPDASTLSIV 549
+ +M +S +
Sbjct: 583 KGLMKKSSAEQVA 595
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 244/482 (50%), Gaps = 10/482 (2%)
Query: 83 GCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTK 142
G + + ++T+ S + N G + + + L + N V + +E F +
Sbjct: 67 GLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLE 126
Query: 143 LRVF-GCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIID 201
V+ G PD+ TLI G CR G T A + E + G+G + PD +TY +I
Sbjct: 127 NMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILE-ILEGSGAV-----PDVITYNVMIS 180
Query: 202 GLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQP 261
G CK G ++ A + +M +++P+ VTY +++ C + +A + M+ + P
Sbjct: 181 GYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 262 NVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELF 321
+V+T+T++++ C++ + A +LL+ M RG PD TYN L++G C G++D A +
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 322 VSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEV 381
M S+GC +V++++I++ C T + L ML KG P+VVT++ L L
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 382 HQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSY 441
+ A+ + ++M ++ N+ Y + G CK + +A+E + +IV+Y
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 442 NCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEA 501
N ++ LCK G++E A E+ + L G ++TYN +I GL G+ KA L +M A
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 502 KGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKNEISLN 561
K L+P+ + +++L+ G R + + I+ H + + P+A T + ++ L K+ +
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 562 SI 563
+I
Sbjct: 538 AI 539
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 178/373 (47%), Gaps = 14/373 (3%)
Query: 57 DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNIL 116
A+ V D ML R P V ++ IL + + L + G PD+ YN+L
Sbjct: 222 QAMEVLDRMLQ-RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 117 INCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 176
+N +C E R+ EA + GC+P+V T+N ++ +C TG + A L
Sbjct: 281 VN-------GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 177 EMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLIC 236
+M P VT+ +I+ LC+KG + +A ++ KM PN+++Y L+
Sbjct: 334 DMLRKG------FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 237 GFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKP 296
GFC + A M+ +G P++VT+ ++ LCK+GK++ A +L + +G P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 297 DTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLY 356
TYNT+IDG GK +A +L M + D ++YS L+ G + V+E + +
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 357 RKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKN 416
+ GIRP VT++++ LGL + Q + A+ M N YT I+GL
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
Query: 417 GYIVKAVELFRTL 429
G +A+EL L
Sbjct: 568 GMAKEALELLNEL 580
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/474 (31%), Positives = 234/474 (49%), Gaps = 17/474 (3%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESR 132
P V S+N + + K + L L + +G L + ILI+ F C +
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAF-------CKAGK 227
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEIGVVCKP 191
+ EA +++ G E D+ Y +LI G C G LF+E + G+ P
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS-------P 280
Query: 192 DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
+TY T+I G CK G + +A E+F M + + PN TYT LI G C EA L
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLT 311
M+++ +PN VT+ +I+++LCK+G + A ++ELM R +PD TYN L+ G C
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 312 GKIDRARELFVSM--ESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVV 369
G +D A +L M +S+ DV+SY+ LI+G CK + + L++Y ++ K V
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Query: 370 TYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTL 429
T + L + V A++L+ ++ + + N+ YT IDG CK G + A L +
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 430 RILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQM 489
R+ + + ++ YNCL+ LCK G L+ AW LF + R DVV++NIMI G G +
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 490 DKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDA 543
A L + M GL P+ ++ L+ F++ + I +M PDA
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 190/362 (52%), Gaps = 2/362 (0%)
Query: 196 YTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMM 255
+ ++ GLC+ KA L +M+ ++ P+ +Y ++I GFC + +A L EM
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 256 DQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKID 315
G ++VT+ +++D CK GKMD A L+ M G++ D Y +LI G+C G++D
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 316 RARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLF 375
R + LF + G ++Y+ LI G+CK ++E ++ M+ +G+RP V TY L
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 376 LGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYE 435
GL V + + AL+L + M N Y I+ LCK+G + AVE+ ++ +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 436 LNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMA--DVVTYNIMIHGLCNDGQMDKAH 493
+ ++YN L+ GLC G L+ A +L + + DV++YN +IHGLC + ++ +A
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 494 GLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
++ + K + V N L+ ++ + +K +EL ++ ++ ++ T + ++D
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 554 VK 555
K
Sbjct: 505 CK 506
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 202/432 (46%), Gaps = 28/432 (6%)
Query: 113 YNILINCFLQNGS---SLCVES--RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGH 167
Y+ L+N F + + SLC +S ++ A ++F + G F N L+ L R+ +
Sbjct: 29 YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRN 87
Query: 168 TIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLC-------KKGFVDKAKELFLKMK 220
+A + + +M + DT + GL K GF L LK
Sbjct: 88 HELAFSFYRKML----------ETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK-- 135
Query: 221 DENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMD 280
N + L+ G C + +A L EM + P+V ++ ++ C+ +++
Sbjct: 136 -RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 281 GASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILI 340
A L M G T+ LID +C GK+D A M+ G D+V Y+ LI
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 341 NGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVA 400
G+C +++ G L+ ++L +G P +TY+TL G ++ Q++ A ++F+ M V
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 401 ANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWEL 460
N Y YT IDGLC G +A++L + E N V+YN +I+ LCK G + A E+
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 461 FSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDM--EAKGLEPNFVIFNTLMLGF 518
+ + D +TYNI++ GLC G +D+A L M ++ +P+ + +N L+ G
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 519 IRNNETSKVIEL 530
+ N + +++
Sbjct: 435 CKENRLHQALDI 446
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 168/360 (46%), Gaps = 16/360 (4%)
Query: 57 DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNIL 116
+AL + + M+ + P ++NI+ L K + + + + PD YNIL
Sbjct: 335 EALQLLNLMIE-KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 117 INCFLQNGSSLCVESRIMEAAA-LFTKLRVFG-CEPDVFTYNTLINGLCRTGHTIVALNL 174
+ LC + + EA+ L+ L+ +PDV +YN LI+GLC+ AL++
Sbjct: 394 L-------GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 175 FEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSL 234
++ + G D VT +++ K G V+KA EL+ ++ D I N+ TYT++
Sbjct: 447 YDLLVEKLG------AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 235 ICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGV 294
I GFC N AK L +M +QP+V + ++ LCK G +D A RL E M
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 295 KPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLN 354
PD ++N +IDG G I A L V M G D+ +YS LIN + K ++E ++
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAIS 620
Query: 355 LYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLC 414
+ KM+ G P ++ + + +L ++ + + + T +D +C
Sbjct: 621 FFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 134/260 (51%)
Query: 304 LIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKG 363
L++ Y K A + M G +V +++IL+ G C+ + + ++L R+M
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 364 IRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAV 423
+ P V +Y+T+ G E ++E AL+L +EM+ + + + + ID CK G + +A+
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 424 ELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGL 483
+ ++ + E ++V Y LI G C G L+ LF + G +TYN +I G
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 484 CNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDA 543
C GQ+ +A +F M +G+ PN + L+ G +T + ++LL+ M ++ P+A
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 544 STLSIVVDLLVKNEISLNSI 563
T +I+++ L K+ + +++
Sbjct: 353 VTYNIIINKLCKDGLVADAV 372
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/506 (31%), Positives = 252/506 (49%), Gaps = 23/506 (4%)
Query: 57 DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNIL 116
D + VF M+ P V + + L L K +H+ + LF + S G+ PD+Y Y +
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233
Query: 117 INCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 176
I SLC + A + + GC+ ++ YN LI+GLC+ A+ + +
Sbjct: 234 IR-------SLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKK 286
Query: 177 EMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDE----NINPNAVTYT 232
++A G KPD VTY T++ GLCK + E+ L+M DE +P+ +
Sbjct: 287 DLA------GKDLKPDVVTYCTLVYGLCKV----QEFEIGLEMMDEMLCLRFSPSEAAVS 336
Query: 233 SLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILR 292
SL+ G EA +L ++D GV PN+ + ++D LCK K A L + M
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 293 GVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEG 352
G++P+ TY+ LID +C GK+D A M G V Y+ LING+CK D+
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 353 LNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDG 412
+M++K + PTVVTY +L G ++ AL+L+ EM +A + Y +TT + G
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 413 LCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMAD 472
L + G I AV+LF + + N V+YN +I+G C+ G + A+E + G++ D
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 473 VVTYNIMIHGLCNDGQMDKAHGLFLDMEAKG-LEPNFVIFNTLMLGFIRNNETSKVIELL 531
+Y +IHGLC GQ +A +F+D KG E N + + L+ GF R + + + +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 532 HRMDMRNVMPDASTLSIVVDLLVKNE 557
M R V D +++D +K++
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHK 661
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 175/591 (29%), Positives = 265/591 (44%), Gaps = 115/591 (19%)
Query: 58 ALCVFDYMLNMR--PSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
L + D ML +R PS V+S L L K + L+L KR+ G+ P+L+ YN
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
LI+ SLC + EA LF ++ G P+ TY+ LI+ CR G AL+
Sbjct: 373 LID-------SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 176 EEMA---------------NGNGEIGVVC--------------KPDTVTYTTIIDGLCKK 206
EM NG+ + G + +P VTYT+++ G C K
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 207 GFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTF 266
G ++KA L+ +M + I P+ T+T+L+ G A +A LF EM + V+PN VT+
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 267 TVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMES 326
V+++ C+ G M A L+ M +G+ PDT +Y LI G CLTG+ A+ +
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 327 NGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTY------------HTL 374
C + + Y+ L++G+C+ +EE L++ ++M+ +G+ +V Y L
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 375 FLGLF-EVHQ----------------------VEHALKLFDEMRRNHVAANTYIYTTFID 411
F GL E+H + A ++D M N YT I+
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 412 GLCKNGYI------------------------------------VKAVELFRTLRILKYE 435
GLCK G++ KAVEL ILK
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA--ILKGL 783
Query: 436 L-NIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHG 494
L N +YN LI G C+ GR+E A EL + + G+ D +TY MI+ LC + KA
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 495 LFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDAST 545
L+ M KG+ P+ V +NTL+ G E K EL + M + ++P+ T
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 232/490 (47%), Gaps = 13/490 (2%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVES 131
+P V ++ L L K + ++ L + + P A + L+ + G
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRG------- 346
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKP 191
+I EA L ++ FG P++F YN LI+ LC+ A LF+ M G+IG+ +P
Sbjct: 347 KIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM----GKIGL--RP 400
Query: 192 DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
+ VTY+ +ID C++G +D A +M D + + Y SLI G C D + A+
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLT 311
EM+++ ++P VVT+T +M C GK++ A RL M +G+ P T+ TL+ G
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 312 GKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTY 371
G I A +LF M + V+Y+++I GYC+ D+ + ++M KGI P +Y
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 372 HTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRI 431
L GL Q A D + + + N YT + G C+ G + +A+ + + +
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 432 LKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDK 491
+L++V Y LIDG KH ++ + L + GL D V Y MI G +
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 492 AHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
A G++ M +G PN V + ++ G + ++ L +M + +P+ T +D
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 552 LLVKNEISLN 561
+L K E+ +
Sbjct: 761 ILTKGEVDMQ 770
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 182/379 (48%), Gaps = 45/379 (11%)
Query: 57 DALCVFDYM--LNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYN 114
DA+ +F+ M N++P+R ++N++ + K + G+ PD Y+Y
Sbjct: 525 DAVKLFNEMAEWNVKPNR---VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 115 ILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNL 174
LI+ LC+ + EA L CE + Y L++G CR G AL++
Sbjct: 582 PLIH-------GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 175 FEEMANGNGEIGVVC-----------------------------KPDTVTYTTIIDGLCK 205
+EM ++ +VC KPD V YT++ID K
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 206 KGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVT 265
G +A ++ M +E PN VTYT++I G C A NEA+ L +M PN VT
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754
Query: 266 FTVIMDELCKNGKMDGASRLLEL--MILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVS 323
+ +D L K G++D + +EL IL+G+ +T+TYN LI G+C G+I+ A EL
Sbjct: 755 YGCFLDILTK-GEVD-MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 324 MESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQ 383
M +G D ++Y+ +IN C+ DV++ + L+ M KGIRP V Y+TL G +
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE 872
Query: 384 VEHALKLFDEMRRNHVAAN 402
+ A +L +EM R + N
Sbjct: 873 MGKATELRNEMLRQGLIPN 891
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 160/341 (46%)
Query: 226 PNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRL 285
P T ++L+ G + A LF +M+ G++P+V +T ++ LC+ + A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 286 LELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCK 345
+ M G + YN LIDG C K+ A + + DVV+Y L+ G CK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 346 TKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYI 405
++ E GL + +ML P+ +L GL + ++E AL L + V+ N ++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 406 YTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLP 465
Y ID LCK +A LF + + N V+Y+ LID C+ G+L+ A +
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 466 RVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETS 525
GL V YN +I+G C G + A G +M K LEP V + +LM G+ + +
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 526 KVIELLHRMDMRNVMPDASTLSIVVDLLVKNEISLNSIPQF 566
K + L H M + + P T + ++ L + + +++ F
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 38/246 (15%)
Query: 89 KHYDTVL--SLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVF 146
KH D L L K ++ GL PD Y +I+ + G EA ++ +
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD-------FKEAFGIWDLMINE 711
Query: 147 GCEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN-----------------GNGEI---- 185
GC P+ TY +INGLC+ G A L +M GE+
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQK 771
Query: 186 -----GVVCK---PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICG 237
+ K +T TY +I G C++G +++A EL +M + ++P+ +TYT++I
Sbjct: 772 AVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINE 831
Query: 238 FCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPD 297
C ND +A L+ M ++G++P+ V + ++ C G+M A+ L M+ +G+ P+
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Query: 298 TSTYNT 303
T T
Sbjct: 892 NKTSRT 897
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 144/303 (47%), Gaps = 19/303 (6%)
Query: 255 MDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKI 314
+ +G + +F +++ L K AS LL+ ++LR +KP + +N L Y
Sbjct: 96 LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKP-SDVFNVLFSCY------ 148
Query: 315 DRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSK-GIRPTVVTYHT 373
++ + + S+ +LI Y +++ V +G+ +++ M++K + P V T
Sbjct: 149 EKCK-----------LSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSA 197
Query: 374 LFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILK 433
L GL + A++LF++M + + YIYT I LC+ + +A E+ +
Sbjct: 198 LLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG 257
Query: 434 YELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAH 493
++NIV YN LIDGLCK ++ A + L L DVVTY +++GLC + +
Sbjct: 258 CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317
Query: 494 GLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
+ +M P+ ++L+ G + + + + L+ R+ V P+ + ++D L
Sbjct: 318 EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 554 VKN 556
K
Sbjct: 378 CKG 380
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 242/489 (49%), Gaps = 29/489 (5%)
Query: 61 VFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCF 120
VF ML + S P V ++NIL + D L+LF ++ + G P++ YN LI+ +
Sbjct: 192 VFKEMLESQVS-PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 121 LQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 180
C +I + L + + G EP++ +YN +INGLCR G + EM
Sbjct: 251 -------CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 181 GNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCY 240
+ D VTY T+I G CK+G +A + +M + P+ +TYTSLI C
Sbjct: 304 RGYSL------DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 241 ANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTST 300
A + N A +M +G+ PN T+T ++D + G M+ A R+L M G P T
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 301 YNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKML 360
YN LI+G+C+TGK++ A + M+ G DVVSYS +++G+C++ DV+E L + R+M+
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 361 SKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIV 420
KGI+P +TY +L G E + + A L++EM R + + + YT I+ C G +
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 421 KAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMI 480
KA++L + ++V+Y+ LI+GL K R A L L + VTY+ +I
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 481 H---------------GLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETS 525
G C G M +A +F M K +P+ +N ++ G R +
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 526 KVIELLHRM 534
K L M
Sbjct: 658 KAYTLYKEM 666
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/472 (30%), Positives = 247/472 (52%), Gaps = 15/472 (3%)
Query: 73 PPVTSFNILFGCLAKTK-HYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVES 131
P V S+N + ++K + ++FK + + + P+++ YNILI F C
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGF-------CFAG 219
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKP 191
I A LF K+ GC P+V TYNTLI+G C+ L MA E P
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE------P 273
Query: 192 DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
+ ++Y +I+GLC++G + + + +M + + VTY +LI G+C ++++A +
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLT 311
EM+ G+ P+V+T+T ++ +CK G M+ A L+ M +RG+ P+ TY TL+DG+
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 312 GKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTY 371
G ++ A + M NG VV+Y+ LING+C T +E+ + + M KG+ P VV+Y
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 372 HTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRI 431
T+ G + V+ AL++ EM + +T Y++ I G C+ +A +L+ +
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 432 LKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDK 491
+ + +Y LI+ C G LE A +L + + G++ DVVTY+++I+GL + +
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 492 AHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDA 543
A L L + + P+ V ++TL+ N E V+ L+ M+ +M +A
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIKGFCMKGMMTEA 624
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/530 (28%), Positives = 256/530 (48%), Gaps = 67/530 (12%)
Query: 58 ALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILI 117
AL +FD M + P V ++N L K + D L + + GL P+L +YN++I
Sbjct: 224 ALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 118 NCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEE 177
N LC E R+ E + + T++ G D TYNTLI G C+ G+ AL + E
Sbjct: 283 N-------GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 178 MANGNGEIGVV---------CK--------------------PDTVTYTTIIDGLCKKGF 208
M V+ CK P+ TYTT++DG +KG+
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 209 VDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTV 268
+++A + +M D +P+ VTY +LI G C +A + +M ++G+ P+VV+++
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 269 IMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNG 328
++ C++ +D A R+ M+ +G+KPDT TY++LI G+C + A +L+ M G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 329 CMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHA- 387
D +Y+ LIN YC D+E+ L L+ +M+ KG+ P VVTY L GL + + A
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 388 ---LKLF-DEMRRNHVAANTYI----------YTTFIDGLCKNGYIVKAVELFRTLRILK 433
LKLF +E + V +T I + I G C G + +A ++F ++
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 434 YELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAH 493
++ + +YN +I G C+ G + A+ L+ + + G + VT ++ L +G+++
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN--- 692
Query: 494 GLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKV-IELLHRMDMRNVMPD 542
E N VI + L + E +KV +E+ HR +V+ D
Sbjct: 693 -----------ELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLD 731
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 199/362 (54%), Gaps = 1/362 (0%)
Query: 191 PDTVTYTTIIDGLCK-KGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKH 249
P ++Y ++D + K + A+ +F +M + ++PN TY LI GFC+A + + A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 250 LFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYC 309
LF +M +G PNVVT+ ++D CK K+D +LL M L+G++P+ +YN +I+G C
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 310 LTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVV 369
G++ + M G D V+Y+ LI GYCK + + L ++ +ML G+ P+V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 370 TYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTL 429
TY +L + + + A++ D+MR + N YTT +DG + GY+ +A + R +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 430 RILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQM 489
+ ++V+YN LI+G C G++E A + + GL DVV+Y+ ++ G C +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 490 DKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIV 549
D+A + +M KG++P+ + +++L+ GF T + +L M + PD T + +
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 550 VD 551
++
Sbjct: 527 IN 528
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 172/344 (50%), Gaps = 29/344 (8%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
N A+ D M +R P ++ L ++ + + + + +N G P + YN
Sbjct: 362 NRAMEFLDQM-RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
LIN CV ++ +A A+ ++ G PDV +Y+T+++G CR+ AL +
Sbjct: 421 LIN-------GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 176 EEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLI 235
EM E G+ KPDT+TY+++I G C++ +A +L+ +M + P+ TYT+LI
Sbjct: 474 REMV----EKGI--KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 236 CGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVK 295
+C D +A L EM+++GV P+VVT++V+++ L K + A RLL +
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 296 PDTSTYNTLID---------------GYCLTGKIDRARELFVSMESNGCMHDVVSYSILI 340
P TY+TLI+ G+C+ G + A ++F SM D +Y+I+I
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Query: 341 NGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQV 384
+G+C+ D+ + LY++M+ G VT L L + +V
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 135/255 (52%), Gaps = 1/255 (0%)
Query: 298 TSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTK-DVEEGLNLY 356
+S ++ ++ Y ID+A + +++G M V+SY+ +++ ++K ++ N++
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 357 RKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKN 416
++ML + P V TY+ L G ++ AL LFD+M N Y T IDG CK
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 417 GYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTY 476
I +L R++ + E N++SYN +I+GLC+ GR++ + + + R G D VTY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 477 NIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDM 536
N +I G C +G +A + +M GL P+ + + +L+ + ++ +E L +M +
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 537 RNVMPDASTLSIVVD 551
R + P+ T + +VD
Sbjct: 374 RGLCPNERTYTTLVD 388
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 146/338 (43%), Gaps = 29/338 (8%)
Query: 48 GDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLF 107
G T DA+ V + M + P V S++ + ++ D L + + + G+
Sbjct: 424 GHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 108 PDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGH 167
PD Y+ LI F C + R EA L+ ++ G PD FTY LIN C G
Sbjct: 483 PDTITYSSLIQGF-------CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 168 TIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPN 227
AL L EM E GV+ PD VTY+ +I+GL K+ +AK L LK+ E P+
Sbjct: 536 LEKALQLHNEMV----EKGVL--PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 228 AVTY---------------TSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDE 272
VTY SLI GFC EA +F M+ + +P+ + +++
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 273 LCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHD 332
C+ G + A L + M+ G T T L+ GK++ + V + + + +
Sbjct: 650 HCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSE 709
Query: 333 VVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVT 370
+L+ + +++ L++ +M G P ++
Sbjct: 710 AEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 246 bits (627), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 252/481 (52%), Gaps = 23/481 (4%)
Query: 20 LKESLRLTVKDRASLETFL--RERFKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTS 77
L SLR RA T + RE +S + I +DA +F M P P +
Sbjct: 33 LSPSLRFRFWVRAFSGTTIDYREVLRSG----LHNIKFDDAFHLFVLMAYSYP-LPSIVE 87
Query: 78 FNILFGCLAKTKHYDTVLSLFKRL-NSTGL--FPDLYAYNILINCFLQNGSSLCVESRIM 134
FN + +AK + YD V++L+KR+ N+ G+ PDLY NIL+NCF + C +
Sbjct: 88 FNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCR-----CFQPS-- 140
Query: 135 EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTV 194
A + K+ G EPD+ T ++L+NG C + A+ + +M ++G+ K D V
Sbjct: 141 SALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME----KMGI--KRDVV 194
Query: 195 TYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEM 254
T +ID LCK V A E+ +MKD I+PN VTY+SLI G C + +A+ EM
Sbjct: 195 VDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 254
Query: 255 MDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKI 314
+ + PNV+TF+ ++D K GK+ + ++MI + P+ TY++LI G C+ ++
Sbjct: 255 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 314
Query: 315 DRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTL 374
D A ++ M S GC +VV+YS L NG+ K+ V++G+ L M +G+ V+ +TL
Sbjct: 315 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 374
Query: 375 FLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKY 434
G F+ +++ AL +F M N + N Y + GL NG + KA+ F ++ +
Sbjct: 375 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 434
Query: 435 ELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHG 494
+L+I++Y +I G+CK ++ A++LF L + D Y IMI L G +A
Sbjct: 435 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADA 494
Query: 495 L 495
L
Sbjct: 495 L 495
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 206/431 (47%), Gaps = 39/431 (9%)
Query: 150 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFV 209
P + +N ++ + + V +NL++ + N G + PD T +++ C+
Sbjct: 83 PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEG---IEISPDLYTCNILVNCFCRCFQP 139
Query: 210 DKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVI 269
A KM I P+ VT +SL+ GFC +N +A ++ +M G++ +VV T++
Sbjct: 140 SSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTIL 199
Query: 270 MDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGC 329
+D LCKN + A +L+ M RG+ P+ TY++LI G C +G++ A M+S
Sbjct: 200 IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 259
Query: 330 MHDVVSYSILINGY-----------------------------------CKTKDVEEGLN 354
+V+++S LI+ Y C V+E +
Sbjct: 260 NPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIK 319
Query: 355 LYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLC 414
+ M+SKG P VVTY TL G F+ +V+ +KL D+M + VAANT T I G
Sbjct: 320 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 379
Query: 415 KNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVV 474
+ G I A+ +F + NI SYN ++ GL +G +E A F + + D++
Sbjct: 380 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 439
Query: 475 TYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRM 534
TY IMIHG+C + +A+ LF ++ K +EP+F + T+M+ + + L+R
Sbjct: 440 TYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAY-TIMIAELNRAGMRTEADALNRF 498
Query: 535 DMRNVMPDAST 545
++V + S
Sbjct: 499 YQKHVRQNESA 509
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 182/383 (47%), Gaps = 34/383 (8%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGS------- 125
P + + NIL C + + LS ++ G+ PD+ + L+N F + S
Sbjct: 121 PDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYV 180
Query: 126 ---------------------SLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCR 164
+LC ++ A + +++ G P+V TY++LI GLC+
Sbjct: 181 AGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCK 240
Query: 165 TGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENI 224
+G A EM + P+ +T++ +ID K+G + K ++ M +I
Sbjct: 241 SGRLADAERRLHEMDSKK------INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSI 294
Query: 225 NPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASR 284
+PN TY+SLI G C N +EA + M+ +G PNVVT++ + + K+ ++D +
Sbjct: 295 DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIK 354
Query: 285 LLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYC 344
LL+ M RGV +T + NTLI GY GKID A +F M SNG + ++ SY+I++ G
Sbjct: 355 LLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLF 414
Query: 345 KTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTY 404
+VE+ L+ + M ++TY + G+ + V+ A LF +++ V +
Sbjct: 415 ANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFK 474
Query: 405 IYTTFIDGLCKNGYIVKAVELFR 427
YT I L + G +A L R
Sbjct: 475 AYTIMIAELNRAGMRTEADALNR 497
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 178/361 (49%), Gaps = 3/361 (0%)
Query: 210 DKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMD-QGVQ--PNVVTF 266
D A LF+ M P+ V + ++ ++ +L+ + + +G++ P++ T
Sbjct: 67 DDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTC 126
Query: 267 TVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMES 326
++++ C+ + A L M+ G++PD T ++L++G+CL+ I A + ME
Sbjct: 127 NILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEK 186
Query: 327 NGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEH 386
G DVV +ILI+ CK + V L + ++M +GI P VVTY +L GL + ++
Sbjct: 187 MGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLAD 246
Query: 387 ALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLID 446
A + EM + N ++ ID K G + K +++ + + + N+ +Y+ LI
Sbjct: 247 AERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIY 306
Query: 447 GLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEP 506
GLC H R++ A ++ + G +VVTY+ + +G ++D L DM +G+
Sbjct: 307 GLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAA 366
Query: 507 NFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKNEISLNSIPQF 566
N V NTL+ G+ + + + + M ++P+ + +IV+ L N ++ +F
Sbjct: 367 NTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRF 426
Query: 567 K 567
+
Sbjct: 427 E 427
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 171/368 (46%), Gaps = 3/368 (0%)
Query: 191 PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDEN---INPNAVTYTSLICGFCYANDWNEA 247
P V + ++ + K D L+ ++++ I+P+ T L+ FC + A
Sbjct: 83 PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 142
Query: 248 KHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDG 307
+MM G++P++VT + +++ C + + A + M G+K D LID
Sbjct: 143 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 202
Query: 308 YCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPT 367
C + A E+ M+ G +VV+YS LI G CK+ + + +M SK I P
Sbjct: 203 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 262
Query: 368 VVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFR 427
V+T+ L + ++ ++ M + + N + Y++ I GLC + + +A+++
Sbjct: 263 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 322
Query: 428 TLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDG 487
+ N+V+Y+ L +G K R++ +L +P+ G+ A+ V+ N +I G G
Sbjct: 323 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 382
Query: 488 QMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLS 547
++D A G+F M + GL PN +N ++ G N E K + M D T +
Sbjct: 383 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYT 442
Query: 548 IVVDLLVK 555
I++ + K
Sbjct: 443 IMIHGMCK 450
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 437 NIVSYNCLIDGLCKHGRLEIA---WELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAH 493
+IV +N ++ + K ++ W+ + + + D+ T NI+++ C Q A
Sbjct: 84 SIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSAL 143
Query: 494 GLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
M G+EP+ V ++L+ GF +N + + +M+ + D +I++D L
Sbjct: 144 SYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTL 203
Query: 554 VKNEISLNSIPQFKRHK 570
KN + + ++ KR K
Sbjct: 204 CKNRLVVPALEVLKRMK 220
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 245 bits (626), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 254/502 (50%), Gaps = 14/502 (2%)
Query: 69 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLC 128
+ S P V ++N + CL K D L +F+ + P+L YNILI+ LC
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILID-------MLC 388
Query: 129 VESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVV 188
++ A L ++ G P+V T N +++ LC++ A +FEEM V
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK------V 442
Query: 189 CKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAK 248
C PD +T+ ++IDGL K G VD A +++ KM D + N++ YTSLI F +
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 249 HLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGY 308
++ +M++Q P++ MD + K G+ + + E + R PD +Y+ LI G
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 309 CLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTV 368
G + ELF SM+ GC+ D +Y+I+I+G+CK V + L +M +KG PTV
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 369 VTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRT 428
VTY ++ GL ++ +++ A LF+E + + N IY++ IDG K G I +A +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 429 LRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQ 488
L N+ ++N L+D L K + A F S+ + + VTY I+I+GLC +
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 489 MDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSI 548
+KA + +M+ +G++P+ + + T++ G + ++ L R +PD++ +
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 549 VVDLLVKNEISLNSIPQFKRHK 570
+++ L ++++ F+ +
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETR 824
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 248/516 (48%), Gaps = 51/516 (9%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVES 131
RP +++ L G + H D +L+LF+++ G P ++ + LI F + G
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG------- 217
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEIGVVCK 190
R+ A +L +++ + D+ YN I+ + G +A F E+ ANG K
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG-------LK 270
Query: 191 PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHL 250
PD VTYT++I LCK +D+A E+F ++ P Y ++I G+ A ++EA L
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 251 FIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCL 310
+G P+V+ + I+ L K GK+D A ++ E M + P+ STYN LID C
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCR 389
Query: 311 TGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVT 370
GK+D A EL SM+ G +V + +I+++ CK++ ++E ++ +M K P +T
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 371 YHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYT----------------------- 407
+ +L GL +V +V+ A K++++M + N+ +YT
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 408 ------------TFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLE 455
T++D + K G K +F ++ ++ + SY+ LI GL K G
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 456 IAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLM 515
+ELF S+ G + D YNI+I G C G+++KA+ L +M+ KG EP V + +++
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 516 LGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
G + + + L + + + S ++D
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 147/539 (27%), Positives = 252/539 (46%), Gaps = 37/539 (6%)
Query: 48 GDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLF 107
G + + +D + + P V F L AK D+ LSL + S+ L
Sbjct: 176 GAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD 235
Query: 108 PDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGH 167
D+ YN+ I+ F + G ++ A F ++ G +PD TY ++I LC+
Sbjct: 236 ADIVLYNVCIDSFGKVG-------KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 168 TIVALNLFEE---------------MANGNGEIGVVCK--------------PDTVTYTT 198
A+ +FE M G G G + P + Y
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 199 IIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQG 258
I+ L K G VD+A ++F +MK ++ PN TY LI C A + A L M G
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 259 VQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRAR 318
+ PNV T +++D LCK+ K+D A + E M + PD T+ +LIDG G++D A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 319 ELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGL 378
+++ M + C + + Y+ LI + E+G +Y+ M+++ P + +T +
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 527
Query: 379 FEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNI 438
F+ + E +F+E++ + Y+ I GL K G+ + ELF +++ L+
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 439 VSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLD 498
+YN +IDG CK G++ A++L + G VVTY +I GL ++D+A+ LF +
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 499 MEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKNE 557
++K +E N VI+++L+ GF + + +L + + + P+ T + ++D LVK E
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 211/478 (44%), Gaps = 73/478 (15%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
++AL VF+ M + + P ++++NIL L + DT L + GLFP++ NI
Sbjct: 360 DEALKVFEEM--KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
+++ LC ++ EA A+F ++ C PD T+ +LI+GL + G A ++
Sbjct: 418 MVD-------RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 176 EEMANGNGEIGVV-----------------------------CKPDTVTYTTIIDGLCKK 206
E+M + + + C PD T +D + K
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 207 GFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTF 266
G +K + +F ++K P+A +Y+ LI G A NE LF M +QG + +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 267 TVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMES 326
+++D CK GK++ A +LLE M +G +P TY ++IDG ++D A LF +S
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 327 NGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTV------------------ 368
+VV YS LI+G+ K ++E + +++ KG+ P +
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 369 -----------------VTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFID 411
VTY L GL +V + A + EM++ + +T YTT I
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 412 GLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGL 469
GL K G I +A LF + + YN +I+GL R A+ LF R GL
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 225/480 (46%), Gaps = 16/480 (3%)
Query: 77 SFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVES-RIME 135
S+N L +A+ +++D + + ++ G P + N I L CV++ ++ E
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSV---NTCIEMVLG-----CVKANKLRE 151
Query: 136 AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVT 195
+ +R F P Y TLI H+ + L LF++M E+G +P
Sbjct: 152 GYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ----ELGY--EPTVHL 205
Query: 196 YTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMM 255
+TT+I G K+G VD A L +MK +++ + V Y I F + A F E+
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 256 DQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKID 315
G++P+ VT+T ++ LCK ++D A + E + P T YNT+I GY GK D
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 316 RARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLF 375
A L + G + V++Y+ ++ K V+E L ++ +M K P + TY+ L
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILI 384
Query: 376 LGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYE 435
L +++ A +L D M++ + N +D LCK+ + +A +F +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 436 LNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGL 495
+ +++ LIDGL K GR++ A++++ + + + Y +I N G+ + H +
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 496 FLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVK 555
+ DM + P+ + NT M + E K + + R +PDA + SI++ L+K
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 188/408 (46%), Gaps = 15/408 (3%)
Query: 150 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC-KPDTVTYTTIIDGLCKKGF 208
P+ + L+ CR F+ + GE+ V P T ++ G K
Sbjct: 98 PESYNSLLLVMARCRN---------FDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANK 148
Query: 209 VDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTV 268
+ + ++ M+ P YT+LI F N + LF +M + G +P V FT
Sbjct: 149 LREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTT 208
Query: 269 IMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNG 328
++ K G++D A LL+ M + D YN ID + GK+D A + F +E+NG
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 329 CMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHAL 388
D V+Y+ +I CK ++E + ++ + P Y+T+ +G + + A
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 389 KLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGL 448
L + R + Y + L K G + +A+++F ++ N+ +YN LID L
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDML 387
Query: 449 CKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNF 508
C+ G+L+ A+EL S+ + GL +V T NIM+ LC ++D+A +F +M+ K P+
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 509 VIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
+ F +L+ G + ++ +M + D T SIV L+KN
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKM----LDSDCRTNSIVYTSLIKN 491
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 174/374 (46%), Gaps = 14/374 (3%)
Query: 57 DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNIL 116
D ++ M+N S P + N C+ K + ++F+ + + PD +Y+IL
Sbjct: 500 DGHKIYKDMINQNCS-PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558
Query: 117 INCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 176
I+ ++ G + E LF ++ GC D YN +I+G C+ G A L E
Sbjct: 559 IHGLIKAGFA-------NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 177 EMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLIC 236
EM E P VTY ++IDGL K +D+A LF + K + I N V Y+SLI
Sbjct: 612 EMKTKGFE------PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 237 GFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKP 296
GF +EA + E+M +G+ PN+ T+ ++D L K +++ A + M P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 297 DTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLY 356
+ TY LI+G C K ++A + M+ G +SY+ +I+G K ++ E L+
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 357 RKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKN 416
+ + G P Y+ + GL ++ A LF+E RR + + +D L KN
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Query: 417 GYIVKAVELFRTLR 430
+ +A + LR
Sbjct: 846 DCLEQAAIVGAVLR 859
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Query: 314 IDRARELFVSMESNGCM-HDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYH 372
++RA E F E + H SY+ L+ + ++ + + +M G P+V T
Sbjct: 78 VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCI 137
Query: 373 TLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRIL 432
+ LG + +++ + MR+ YTT I + + LF+ ++ L
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 433 KYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKA 492
YE + + LI G K GR++ A L + L AD+V YN+ I G++D A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 493 HGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMP 541
F ++EA GL+P+ V + +++ + N + +E+ ++ +P
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 240/486 (49%), Gaps = 18/486 (3%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESR 132
P + L L+K + L L + + G PD +N +I LC R
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI-------LGLCKFDR 302
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPD 192
I EAA + ++ + G PD TY L+NGLC+ G A +LF + KP+
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----------KPE 352
Query: 193 TVTYTTIIDGLCKKGFVDKAKELFLKM-KDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
V + T+I G G +D AK + M I P+ TY SLI G+ A +
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLT 311
+M ++G +PNV ++T+++D CK GK+D A +L M G+KP+T +N LI +C
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 312 GKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTY 371
+I A E+F M GC DV +++ LI+G C+ +++ L L R M+S+G+ VTY
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 372 HTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRI 431
+TL +++ A KL +EM + Y + I GLC+ G + KA LF +
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 432 LKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDK 491
+ + +S N LI+GLC+ G +E A E + G D+VT+N +I+GLC G+++
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 492 AHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
+F ++A+G+ P+ V FNTLM + LL +P+ T SI++
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Query: 552 LLVKNE 557
++ E
Sbjct: 713 SIIPQE 718
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/521 (28%), Positives = 251/521 (48%), Gaps = 41/521 (7%)
Query: 65 MLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNG 124
M N+ P S+N++ L + ++F + S + P L+ + +++ F
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAF---- 227
Query: 125 SSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEM------ 178
C + I A +L + GC P+ Y TLI+ L + AL L EEM
Sbjct: 228 ---CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 179 ---ANGNGEIGVVCK--------------------PDTVTYTTIIDGLCKKGFVDKAKEL 215
N I +CK PD +TY +++GLCK G VD AK+L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 216 FLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQ-GVQPNVVTFTVIMDELC 274
F ++ P V + +LI GF ++AK + +M+ G+ P+V T+ ++
Sbjct: 345 FYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 275 KNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVV 334
K G + A +L M +G KP+ +Y L+DG+C GKID A + M ++G + V
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 335 SYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEM 394
++ LI+ +CK + E + ++R+M KG +P V T+++L GL EV +++HAL L +M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 395 RRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRL 454
V ANT Y T I+ + G I +A +L + L+ ++YN LI GLC+ G +
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 455 EIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTL 514
+ A LF + R G ++ NI+I+GLC G +++A +M +G P+ V FN+L
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 515 MLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVK 555
+ G R + + ++ + PD T + ++ L K
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 220/437 (50%), Gaps = 19/437 (4%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
N+A + + ML +R P ++ L L K D LF R+ P++ +N
Sbjct: 304 NEAAKMVNRML-IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNT 358
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRV-FGCEPDVFTYNTLINGLCRTGHTIVALNL 174
LI+ F+ +G R+ +A A+ + + +G PDV TYN+LI G + G +AL +
Sbjct: 359 LIHGFVTHG-------RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 175 FEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSL 234
+M N CKP+ +YT ++DG CK G +D+A + +M + + PN V + L
Sbjct: 412 LHDMRNKG------CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 235 ICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGV 294
I FC + EA +F EM +G +P+V TF ++ LC+ ++ A LL MI GV
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 295 KPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLN 354
+T TYNTLI+ + G+I AR+L M G D ++Y+ LI G C+ +V++ +
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 355 LYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLC 414
L+ KML G P+ ++ + L GL VE A++ EM + + + I+GLC
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 415 KNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVV 474
+ G I + +FR L+ + V++N L+ LCK G + A L G + +
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Query: 475 TYNIMIHGLCNDGQMDK 491
T++I++ + +D+
Sbjct: 706 TWSILLQSIIPQETLDR 722
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 34/362 (9%)
Query: 42 FKSSGEGDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRL 101
F + G +T +DA V M+ P V ++N L K L + +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 102 NSTGLFPDLYAYNILINCFLQNG----------------------------SSLCVESRI 133
+ G P++Y+Y IL++ F + G S+ C E RI
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 134 MEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDT 193
EA +F ++ GC+PDV+T+N+LI+GLC AL L +M + GVV +T
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NT 529
Query: 194 VTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIE 253
VTY T+I+ ++G + +A++L +M + + +TY SLI G C A + ++A+ LF +
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 254 MMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGK 313
M+ G P+ ++ ++++ LC++G ++ A + M+LRG PD T+N+LI+G C G+
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 314 IDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHT 373
I+ +F +++ G D V+++ L++ CK V + L + + G P T+
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 374 LF 375
L
Sbjct: 710 LL 711
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 174/443 (39%), Gaps = 103/443 (23%)
Query: 195 TYTTIIDGLCKKGFVDKAKELFLKMKDENI------------------------------ 224
Y +I L G L ++MKDE I
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 225 ------NPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGK 278
P +Y ++ N A ++F +M+ + + P + TF V+M C +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 279 MDG-----------------------------------ASRLLELMILRGVKPDTSTYNT 303
+D A +LLE M L G PD T+N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 304 LIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKM---- 359
+I G C +I+ A ++ M G D ++Y L+NG CK V+ +L+ ++
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 360 ----------------------------LSKGIRPTVVTYHTLFLGLFEVHQVEHALKLF 391
S GI P V TY++L G ++ V AL++
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 392 DEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKH 451
+MR N Y YT +DG CK G I +A + + + N V +NCLI CK
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 452 GRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIF 511
R+ A E+F +PR G DV T+N +I GLC ++ A L DM ++G+ N V +
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 512 NTLMLGFIRNNETSKVIELLHRM 534
NTL+ F+R E + +L++ M
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEM 555
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVES 131
+P V +FN L L + L L + + S G+ + YN LIN FL+ G
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE------ 544
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEIGVVCK 190
I EA L ++ G D TYN+LI GLCR G A +LFE+M +G+
Sbjct: 545 -IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA------- 596
Query: 191 PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHL 250
P ++ +I+GLC+ G V++A E +M P+ VT+ SLI G C A + +
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 251 FIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCL 310
F ++ +G+ P+ VTF +M LCK G + A LL+ I G P+ T++ L+
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIP 716
Query: 311 TGKIDRAR 318
+DR R
Sbjct: 717 QETLDRRR 724
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 152/336 (45%), Gaps = 43/336 (12%)
Query: 258 GVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGV----------------------- 294
G + + + V++ +L NG+ RLL M G+
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165
Query: 295 -------------KPDTSTYNTLIDGYCLTGKIDR-ARELFVSMESNGCMHDVVSYSILI 340
+P +YN +++ ++G + A +F M S + ++ +++
Sbjct: 166 TRLMLEMRNVYSCEPTFKSYNVVLE-ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 224
Query: 341 NGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVA 400
+C +++ L+L R M G P V Y TL L + ++V AL+L +EM
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 401 ANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWEL 460
+ + I GLCK I +A ++ + I + + ++Y L++GLCK GR++ A +L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 461 FSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDM-EAKGLEPNFVIFNTLMLGFI 519
F +P+ ++V +N +IHG G++D A + DM + G+ P+ +N+L+ G+
Sbjct: 345 FYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 520 RNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVK 555
+ +E+LH M + P+ + +I+VD K
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 258/515 (50%), Gaps = 15/515 (2%)
Query: 57 DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYD-TVLSLFKRLNSTGLFPDLYAYNI 115
+A VF+ MLN V S N+ L+K + T + +F+ G+ ++ +YNI
Sbjct: 193 EARRVFEKMLNYGLVLS-VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
+I+ Q G RI EA L + + G PDV +Y+T++NG CR G L
Sbjct: 252 VIHFVCQLG-------RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 176 EEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLI 235
E M KP++ Y +II LC+ + +A+E F +M + I P+ V YT+LI
Sbjct: 305 EVMKRKG------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 236 CGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVK 295
GFC D A F EM + + P+V+T+T I+ C+ G M A +L M +G++
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 296 PDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNL 355
PD+ T+ LI+GYC G + A + M GC +VV+Y+ LI+G CK D++ L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 356 YRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCK 415
+M G++P + TY+++ GL + +E A+KL E + A+T YTT +D CK
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 416 NGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVT 475
+G + KA E+ + + + IV++N L++G C HG LE +L + + G+ + T
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 476 YNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMD 535
+N ++ C + A ++ DM ++G+ P+ + L+ G + + L M
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 536 MRNVMPDASTLSIVVDLLVKNEISLNSIPQFKRHK 570
+ ST S+++ +K + L + F + +
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 234/475 (49%), Gaps = 14/475 (2%)
Query: 71 SRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVE 130
S P V F++ F L +F+++ + GL + + N+ +L S C +
Sbjct: 173 SDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNV----YLTRLSKDCYK 226
Query: 131 SRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCK 190
+ A +F + G +V +YN +I+ +C+ G A +L M
Sbjct: 227 T--ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG------YT 278
Query: 191 PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHL 250
PD ++Y+T+++G C+ G +DK +L MK + + PN+ Y S+I C EA+
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 251 FIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCL 310
F EM+ QG+ P+ V +T ++D CK G + AS+ M R + PD TY +I G+C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 311 TGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVT 370
G + A +LF M G D V+++ LINGYCK +++ ++ M+ G P VVT
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 371 YHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLR 430
Y TL GL + ++ A +L EM + + N + Y + ++GLCK+G I +AV+L
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 431 ILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMD 490
+ V+Y L+D CK G ++ A E+ + GL +VT+N++++G C G ++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 491 KAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDAST 545
L M AKG+ PN FN+L+ + N + M R V PD T
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 77 SFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEA 136
++ L K+ D + K + GL P + +N+L+N F C+ + +
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF-------CLHGMLEDG 580
Query: 137 AALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEIGVVCKPDTVT 195
L + G P+ T+N+L+ C + A ++++M + G G PD T
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG-------PDGKT 633
Query: 196 YTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMM 255
Y ++ G CK + +A LF +MK + + + TY+ LI GF + EA+ +F +M
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 256 DQGVQPNVVTFTVIMDELCKNGKMD 280
+G+ + F D K + D
Sbjct: 694 REGLAADKEIFDFFSDTKYKGKRPD 718
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 241 bits (616), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 239/489 (48%), Gaps = 13/489 (2%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVES 131
RP + K L LF R+ ++P ++ YN+LI+ LC
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID-------GLCKGK 228
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKP 191
R+ +A LF ++ P + TYNTLI+G C+ G+ + + E M + E P
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE------P 282
Query: 192 DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
+T+ T++ GL K G V+ A+ + +MKD P+A T++ L G+ A ++
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLT 311
+D GV+ N T +++++ LCK GK++ A +L + +G+ P+ YNT+IDGYC
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 312 GKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTY 371
G + AR +ME G D ++Y+ LI +C+ ++E KM KG+ P+V TY
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 372 HTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRI 431
+ L G ++ + + EM N N Y T I+ LCK +++A + R +
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522
Query: 432 LKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDK 491
+ YN LIDG C G++E A+ + + G+ ++VTYN +I GL G++ +
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 492 AHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
A L L++ KGL+P+ +N+L+ G+ + I L M + P T +++
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 552 LLVKNEISL 560
L K I L
Sbjct: 643 LCTKEGIEL 651
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 161/620 (25%), Positives = 273/620 (44%), Gaps = 90/620 (14%)
Query: 8 KNEPSYPTTTAK--LKESLRLTVKDRASLETFL---RERFKSS----GEGDITTITPNDA 58
+NE YP++ + L + L T + R ++ FL F+ S G+ + +D
Sbjct: 136 RNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDV 195
Query: 59 LCVFDYMLNMRPSR--PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNIL 116
+ M+ R P V +N+L L K K + LF + + L P L YN L
Sbjct: 196 GKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
Query: 117 INCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 176
I+ + + G+ ++ + +++ EP + T+NTL+ GL + G A N+ +
Sbjct: 256 IDGYCKAGNP-------EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 177 EMANGNGEIGVVCKPDTVTYTTIIDG---------------------------------- 202
EM + +G V PD T++ + DG
Sbjct: 309 EMKD----LGFV--PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 203 -LCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQP 261
LCK+G ++KA+E+ + + + PN V Y ++I G+C D A+ M QG++P
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 262 NVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELF 321
+ + + ++ C+ G+M+ A + + M L+GV P TYN LI GY + D+ ++
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482
Query: 322 VSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEV 381
ME NG M +VVSY LIN CK + E + R M +G+ P V Y+ L G
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542
Query: 382 HQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSY 441
++E A + EM + + N Y T IDGL G + +A +L + + ++ +Y
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 442 NCLIDGLCKHGRLEIAWELFSSLPRVG-------------------------------LM 470
N LI G G ++ L+ + R G L
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLK 662
Query: 471 ADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIEL 530
D++ YN ++H G M+KA L M K + + +N+L+LG ++ + +V L
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 531 LHRMDMRNVMPDASTLSIVV 550
+ M+ R + P+A T +I+V
Sbjct: 723 IDEMNAREMEPEADTYNIIV 742
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 230/495 (46%), Gaps = 44/495 (8%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESR 132
P +F+ILF + + + L +++ +G+ + Y +IL+N +LC E +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN-------ALCKEGK 369
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE---------------- 176
I +A + + G P+ YNT+I+G CR G + A E
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 177 ---------EMANGNGEIGVV----CKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDEN 223
EM N E+ + P TY +I G +K DK ++ +M+D
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 224 INPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGAS 283
PN V+Y +LI C + EA+ + +M D+GV P V + +++D C GK++ A
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 284 RLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGY 343
R + M+ +G++ + TYNTLIDG +TGK+ A +L + + G DV +Y+ LI+GY
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 344 CKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANT 403
+V+ + LY +M GI+PT+ TYH L + L +E +LF EM + +
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTERLFGEM---SLKPDL 665
Query: 404 YIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSS 463
+Y + +G + KA L + + L+ +YN LI G K G+L L
Sbjct: 666 LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725
Query: 464 LPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGF---IR 520
+ + + TYNI++ G C A+ + +M+ KG + I N L+ G R
Sbjct: 726 MNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWR 785
Query: 521 NNETSKVI-ELLHRM 534
+ E VI E+ RM
Sbjct: 786 SKEAEIVISEMNGRM 800
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 200/428 (46%), Gaps = 7/428 (1%)
Query: 125 SSLCVESR-IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 183
S L ES+ I EAA LF LR G P + L++ L +T V +N+F + +
Sbjct: 116 SVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD- 174
Query: 184 EIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYAND 243
+P Y I K V K ELF +MK + I P+ Y LI G C
Sbjct: 175 -----FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 244 WNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNT 303
N+A+ LF EM+ + + P+++T+ ++D CK G + + ++ E M ++P T+NT
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 304 LIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKG 363
L+ G G ++ A + M+ G + D ++SIL +GY + E L +Y + G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 364 IRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAV 423
++ T L L + ++E A ++ + N IY T IDG C+ G +V A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 424 ELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGL 483
+ + + ++YNCLI C+ G +E A + + + G+ V TYNI+I G
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 484 CNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDA 543
+ DK + +ME G PN V + TL+ + ++ + + M+ R V P
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 544 STLSIVVD 551
++++D
Sbjct: 530 RIYNMLID 537
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 162/361 (44%), Gaps = 46/361 (12%)
Query: 66 LNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGS 125
+ ++ P V ++NIL G + +D + K + G P++ +Y LINC
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC------ 503
Query: 126 SLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEI 185
LC S+++EA + + G P V YN LI+G C G A +EM E+
Sbjct: 504 -LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 186 GVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWN 245
+V TY T+IDGL G + +A++L L++ + + P+ TY SLI G+ +A +
Sbjct: 563 NLV------TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 246 EAKHLFIEMMDQGVQPNVVTFTVIMDELCK------------------------------ 275
L+ EM G++P + T+ +++ LC
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCY 675
Query: 276 --NGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDV 333
+G M+ A L + MI + + D +TYN+LI G GK+ R L M + +
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Query: 334 VSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDE 393
+Y+I++ G+C+ KD YR+M KG V + L GL E + + A + E
Sbjct: 736 DTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISE 795
Query: 394 M 394
M
Sbjct: 796 M 796
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 117/242 (48%)
Query: 314 IDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHT 373
I A +LF ++ + G S ++L++ KTK +N++ +L RP+ Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 374 LFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILK 433
++ V L+LF+ M+ + + + +IY IDGLCK + A +LF + +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 434 YELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAH 493
++++YN LIDG CK G E ++++ + + ++T+N ++ GL G ++ A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 494 GLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLL 553
+ +M+ G P+ F+ L G+ N + + + V +A T SI+++ L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 554 VK 555
K
Sbjct: 365 CK 366
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 119/245 (48%), Gaps = 9/245 (3%)
Query: 318 RELF--VSMESNGCMHDVVSY---SILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYH 372
+ELF S+ S HD SY S+L+N ++K + E +L+ + ++GI P+ +
Sbjct: 93 KELFSAFSLSSPSLKHDF-SYLLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSLT 148
Query: 373 TLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRIL 432
L L + Q + +F + + + ++Y I K + K +ELF ++
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 208
Query: 433 KYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKA 492
+ ++ YN LIDGLCK R+ A +LF + L+ ++TYN +I G C G +K+
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 493 HGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDL 552
+ M+A +EP+ + FNTL+ G + +L M +PDA T SI+ D
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Query: 553 LVKNE 557
NE
Sbjct: 329 YSSNE 333
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/474 (29%), Positives = 251/474 (52%), Gaps = 19/474 (4%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQ---NGSSLC 128
+P V S++ + LAK D L LF ++ G+ PD+ YNILI+ FL+ + +++
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAME 240
Query: 129 VESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVV 188
+ R++E ++++ P+V T+N +I+GL + G L ++E M E
Sbjct: 241 LWDRLLEDSSVY---------PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE---- 287
Query: 189 CKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAK 248
D TY+++I GLC G VDKA+ +F ++ + + + VTY +++ GFC E+
Sbjct: 288 --KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345
Query: 249 HLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGY 308
L+ +M+ N+V++ +++ L +NGK+D A+ + LM +G D +TY I G
Sbjct: 346 ELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404
Query: 309 CLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTV 368
C+ G +++A + +ES+G DV +Y+ +I+ CK K +EE NL ++M G+
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464
Query: 369 VTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRT 428
+ L GL ++ A EM +N Y I GLCK G +A +
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524
Query: 429 LRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQ 488
+ ++ ++ +Y+ L+ GLC+ ++++A EL+ + GL DV+ +NI+IHGLC+ G+
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Query: 489 MDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPD 542
+D A + +ME + N V +NTLM GF + ++++ + M + PD
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 218/462 (47%), Gaps = 14/462 (3%)
Query: 58 ALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILI 117
A+ ++D +L P V + NI+ L+K D L +++R+ DLY Y+ LI
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 118 NCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEE 177
+ LC + +A ++F +L DV TYNT++ G CR G +L L+
Sbjct: 298 H-------GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 178 MANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICG 237
M + N + V+Y +I GL + G +D+A ++ M + + TY I G
Sbjct: 351 MEHKNS-------VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHG 403
Query: 238 FCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPD 297
C N+A + E+ G +V + I+D LCK +++ AS L++ M GV+ +
Sbjct: 404 LCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463
Query: 298 TSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYR 357
+ N LI G ++ A M NGC VVSY+ILI G CK E +
Sbjct: 464 SHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVK 523
Query: 358 KMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNG 417
+ML G +P + TY L GL +++ AL+L+ + ++ + + ++ I GLC G
Sbjct: 524 EMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVG 583
Query: 418 YIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYN 477
+ A+ + + N+V+YN L++G K G A ++ + ++GL D+++YN
Sbjct: 584 KLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYN 643
Query: 478 IMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFI 519
++ GLC + A F D G+ P +N L+ +
Sbjct: 644 TIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 199/386 (51%), Gaps = 6/386 (1%)
Query: 189 CKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDE-NINPNAVTYTSLICGFCYANDWNEA 247
CK D ++I K D+A ++F +M++ P +Y +L+ F A W +
Sbjct: 74 CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKV 133
Query: 248 KHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDG 307
+ LF GV PN+ T+ V++ CK + + A L+ M G KPD +Y+T+I+
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIND 193
Query: 308 YCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLS-KGIRP 366
GK+D A ELF M G DV Y+ILI+G+ K KD + + L+ ++L + P
Sbjct: 194 LAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYP 253
Query: 367 TVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELF 426
V T++ + GL + +V+ LK+++ M++N + Y Y++ I GLC G + KA +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 427 RTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCND 486
L K +++V+YN ++ G C+ G+++ + EL+ + ++V+YNI+I GL +
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLEN 372
Query: 487 GQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTL 546
G++D+A ++ M AKG + + + G N +K + ++ ++ D
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 547 SIVVDLLVKN---EISLNSIPQFKRH 569
+ ++D L K E + N + + +H
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKH 458
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 203/423 (47%), Gaps = 9/423 (2%)
Query: 135 EAAALFTKLR-VFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDT 193
+A +F ++R +FGCEP + +YNTL+N + +LF GV P+
Sbjct: 96 QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA----GVA--PNL 149
Query: 194 VTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIE 253
TY +I CKK +KA+ M E P+ +Y+++I A ++A LF E
Sbjct: 150 QTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 254 MMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLE-LMILRGVKPDTSTYNTLIDGYCLTG 312
M ++GV P+V + +++D K A L + L+ V P+ T+N +I G G
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Query: 313 KIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYH 372
++D +++ M+ N D+ +YS LI+G C +V++ +++ ++ + VVTY+
Sbjct: 270 RVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329
Query: 373 TLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRIL 432
T+ G +++ +L+L+ M + + N Y I GL +NG I +A ++R +
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAK 388
Query: 433 KYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKA 492
Y + +Y I GLC +G + A + + G DV Y +I LC ++++A
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 493 HGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDL 552
L +M G+E N + N L+ G IR++ + L M P + +I++
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 553 LVK 555
L K
Sbjct: 509 LCK 511
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 149/318 (46%), Gaps = 37/318 (11%)
Query: 258 GVQPNVVTFTVIMDELCKNGKMDGASRLLELMILR------------------------- 292
G + V + I+ L + ++ SR++EL+ +
Sbjct: 38 GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQA 97
Query: 293 -----------GVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILIN 341
G +P +YNTL++ + + + LF E+ G ++ +Y++LI
Sbjct: 98 LDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK 157
Query: 342 GYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAA 401
CK K+ E+ M +G +P V +Y T+ L + +++ AL+LFDEM VA
Sbjct: 158 MSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP 217
Query: 402 NTYIYTTFIDGLCKNGYIVKAVELF-RTLRILKYELNIVSYNCLIDGLCKHGRLEIAWEL 460
+ Y IDG K A+EL+ R L N+ ++N +I GL K GR++ ++
Sbjct: 218 DVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Query: 461 FSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIR 520
+ + + D+ TY+ +IHGLC+ G +DKA +F +++ + + V +NT++ GF R
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 521 NNETSKVIELLHRMDMRN 538
+ + +EL M+ +N
Sbjct: 338 CGKIKESLELWRIMEHKN 355
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 1/207 (0%)
Query: 363 GIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKA 422
G + V YH + L E V H ++ + +R + + + I KN +A
Sbjct: 38 GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQA 97
Query: 423 VELFRTLR-ILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIH 481
+++F+ +R I E I SYN L++ + + LF+ G+ ++ TYN++I
Sbjct: 98 LDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK 157
Query: 482 GLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMP 541
C + +KA G M +G +P+ ++T++ + + +EL M R V P
Sbjct: 158 MSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP 217
Query: 542 DASTLSIVVDLLVKNEISLNSIPQFKR 568
D + +I++D +K + ++ + R
Sbjct: 218 DVTCYNILIDGFLKEKDHKTAMELWDR 244
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 238 bits (608), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 242/461 (52%), Gaps = 15/461 (3%)
Query: 63 DYMLNM-RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFL 121
DY L + R P V + +LF C K Y L + S G+ P++Y Y I I
Sbjct: 186 DYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYI---- 241
Query: 122 QNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 181
LC ++++ EA +F ++ G P+++TY+ +I+G C+TG+ A L++E+
Sbjct: 242 ---LDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI--- 295
Query: 182 NGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYA 241
+ P+ V + T++DG CK + A+ LF+ M ++PN Y LI G C +
Sbjct: 296 ---LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKS 352
Query: 242 NDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTY 301
+ EA L EM + P+V T+T++++ LC ++ A+RL + M + P ++TY
Sbjct: 353 GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412
Query: 302 NTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLS 361
N+LI GYC +++A +L M ++G +++++S LI+GYC +D++ + LY +M
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 362 KGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVK 421
KGI P VVTY L F+ ++ AL+L+ +M + N + + +DG K G +
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSV 532
Query: 422 AVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIH 481
A++ ++ + N V + CLI+GLC++G + A FS + G+ D+ +Y M+
Sbjct: 533 AIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLK 592
Query: 482 GLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNN 522
G + ++ L DM G+ PN ++ N L+ F + N
Sbjct: 593 GHLQEKRITDTMMLQCDMIKTGILPNLLV-NQLLARFYQAN 632
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 235/475 (49%), Gaps = 14/475 (2%)
Query: 68 MRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSL 127
M+ S +IL G L + + +D+V ++ + S GL PD++ Y +L C + G
Sbjct: 158 MKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 128 CVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGV 187
E + E +L G +P+V+ Y I LCR A +FE M GV
Sbjct: 217 KKEKLLDEMTSL-------GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKH----GV 265
Query: 188 VCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEA 247
+ P+ TY+ +IDG CK G V +A L+ ++ + PN V + +L+ GFC A + A
Sbjct: 266 L--PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 248 KHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDG 307
+ LF+ M+ GV PN+ + ++ CK+G M A LL M + PD TY LI+G
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
Query: 308 YCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPT 367
C+ ++ A LF M++ +Y+ LI+GYCK ++E+ L+L +M + G+ P
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 368 VVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFR 427
++T+ TL G V ++ A+ L+ EM + + YT ID K + +A+ L+
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYS 503
Query: 428 TLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDG 487
+ N ++ CL+DG K GRL +A + + + + V + +I GLC +G
Sbjct: 504 DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Query: 488 QMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPD 542
+ +A F DM + G+ P+ + +++ G ++ + + L M ++P+
Sbjct: 564 YILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 197/383 (51%), Gaps = 4/383 (1%)
Query: 170 VALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAV 229
+ + LFEE + E+ C PD+ +I++GL ++ D + M + P+
Sbjct: 143 LEMGLFEEALWVSREMK--CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 200
Query: 230 TYTSLICGFCYAND-WNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLEL 288
Y L C+ +++ + L EM G++PNV +T+ + +LC++ KM+ A ++ EL
Sbjct: 201 IYFVLF-QCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFEL 259
Query: 289 MILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKD 348
M GV P+ TY+ +IDGYC TG + +A L+ + + +VV + L++G+CK ++
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 349 VEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTT 408
+ +L+ M+ G+ P + Y+ L G + + A+ L EM +++ + + YT
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 409 FIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVG 468
I+GLC + +A LF+ ++ + + +YN LI G CK +E A +L S + G
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 469 LMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVI 528
+ +++T++ +I G CN + A GL+ +M KG+ P+ V + L+ + + +
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 529 ELLHRMDMRNVMPDASTLSIVVD 551
L M + P+ T + +VD
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVD 522
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 198/413 (47%), Gaps = 6/413 (1%)
Query: 144 RVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGL 203
R C PD +++NGL R ++ M + G+V PD Y +
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISR----GLV--PDVHIYFVLFQCC 209
Query: 204 CKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNV 263
K+G K ++L +M I PN YT I C N EA+ +F M GV PN+
Sbjct: 210 FKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269
Query: 264 VTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVS 323
T++ ++D CK G + A L + +++ + P+ + TL+DG+C ++ AR LFV
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 324 MESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQ 383
M G ++ Y+ LI+G+CK+ ++ E + L +M S + P V TY L GL Q
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 384 VEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNC 443
V A +LF +M+ + ++ Y + I G CK + +A++L + E NI++++
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 444 LIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKG 503
LIDG C ++ A L+ + G++ DVVTY +I + M +A L+ DM G
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 504 LEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
+ PN F L+ GF + S I+ + + + + +++ L +N
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQN 562
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 189/380 (49%), Gaps = 11/380 (2%)
Query: 172 LNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTY 231
N E++ + IGV ++ +I + G ++A + +MK +P++
Sbjct: 119 FNALEDIQSPKFSIGV--------FSLLIMEFLEMGLFEEALWVSREMK---CSPDSKAC 167
Query: 232 TSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMIL 291
S++ G ++ + M+ +G+ P+V + V+ K G +LL+ M
Sbjct: 168 LSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS 227
Query: 292 RGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEE 351
G+KP+ Y I C K++ A ++F M+ +G + ++ +YS +I+GYCKT +V +
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 352 GLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFID 411
LY+++L + P VV + TL G + ++ A LF M + V N Y+Y I
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 412 GLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMA 471
G CK+G +++AV L + L ++ +Y LI+GLC ++ A LF + +
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 472 DVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELL 531
TYN +IHG C + M++A L +M A G+EPN + F+TL+ G+ + + L
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Query: 532 HRMDMRNVMPDASTLSIVVD 551
M ++ ++PD T + ++D
Sbjct: 468 FEMTIKGIVPDVVTYTALID 487
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 170/359 (47%), Gaps = 13/359 (3%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESR 132
P V F L K + T SLF + G+ P+LY YN LI+ ++G+
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN------- 354
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPD 192
++EA L +++ PDVFTY LINGLC A LF++M N P
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER------IFPS 408
Query: 193 TVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFI 252
+ TY ++I G CK+ +++A +L +M + PN +T+++LI G+C D A L+
Sbjct: 409 SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYF 468
Query: 253 EMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTG 312
EM +G+ P+VVT+T ++D K M A RL M+ G+ P+ T+ L+DG+ G
Sbjct: 469 EMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEG 528
Query: 313 KIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYH 372
++ A + + + V ++ LI G C+ + + M S GI P + +Y
Sbjct: 529 RLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYV 588
Query: 373 TLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRI 431
++ G + ++ + L +M + + N + NGY+ A L + R+
Sbjct: 589 SMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRL 647
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 235 bits (599), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 149/476 (31%), Positives = 234/476 (49%), Gaps = 14/476 (2%)
Query: 69 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLC 128
R P + ++N+ L + D + + L G PD+ YN LI LC
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI-------YGLC 297
Query: 129 VESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVV 188
S+ EA K+ G EPD +TYNTLI G C+ G +A + + A NG +
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD-AVFNGFV--- 353
Query: 189 CKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAK 248
PD TY ++IDGLC +G ++A LF + + I PN + Y +LI G EA
Sbjct: 354 --PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 249 HLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGY 308
L EM ++G+ P V TF ++++ LCK G + A L+++MI +G PD T+N LI GY
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 309 CLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTV 368
K++ A E+ M NG DV +Y+ L+NG CKT E+ + Y+ M+ KG P +
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 369 VTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRT 428
T++ L L +++ AL L +EM+ V + + T IDG CKNG + A LFR
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 429 LR-ILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDG 487
+ K + +YN +I + + +A +LF + L D TY +M+ G C G
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 488 QMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDA 543
++ + L+M G P+ ++ + + ++HRM + ++P+A
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 231 bits (590), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 237/501 (47%), Gaps = 14/501 (2%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
+A+ VF+ M + P V S+N + L + ++D ++ R+ G+ PD+Y++ I
Sbjct: 93 QEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
+ F C SR A L + GCE +V Y T++ G LF
Sbjct: 152 RMKSF-------CKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 176 EEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLI 235
+M + + T+ ++ LCKKG V + ++L K+ + PN TY I
Sbjct: 205 GKMLASGVSLCLS------TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 236 CGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVK 295
G C + + A + +++QG +P+V+T+ ++ LCKN K A L M+ G++
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 296 PDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNL 355
PD+ TYNTLI GYC G + A + NG + D +Y LI+G C + L L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 356 YRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCK 415
+ + L KGI+P V+ Y+TL GL + A +L +EM + + ++GLCK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 416 NGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVT 475
G + A L + + Y +I ++N LI G ++E A E+ + G+ DV T
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 476 YNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMD 535
YN +++GLC + + + M KG PN FN L+ R + + + LL M
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 536 MRNVMPDASTLSIVVDLLVKN 556
++V PDA T ++D KN
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKN 579
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 179/361 (49%)
Query: 195 TYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEM 254
Y + +KG V +A +F +M + P +Y +++ + +++A +++ M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 255 MDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKI 314
D+G+ P+V +FT+ M CK + A RLL M +G + + Y T++ G+
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 315 DRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTL 374
ELF M ++G + +++ L+ CK DV+E L K++ +G+ P + TY+
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 375 FLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKY 434
GL + +++ A+++ + + Y I GLCKN +A +
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 435 ELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHG 494
E + +YN LI G CK G +++A + G + D TY +I GLC++G+ ++A
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 495 LFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLV 554
LF + KG++PN +++NTL+ G + +L + M + ++P+ T +I+V+ L
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 555 K 555
K
Sbjct: 438 K 438
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 177/361 (49%), Gaps = 31/361 (8%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESR 132
P V +FNIL L K L K + S G FPD++ +NILI+ + + +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY-------STQLK 476
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPD 192
+ A + + G +PDV+TYN+L+NGLC+T + ++ M C P+
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG------CAPN 530
Query: 193 TVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFI 252
T+ +++ LC+ +D+A L +MK++++NP+AVT+ +LI GFC D + A LF
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 253 EMMDQ-GVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLT 311
+M + V + T+ +I+ + + A +L + M+ R + PD TY ++DG+C T
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKT 650
Query: 312 GKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTY 371
G ++ + + M NG + + + +IN C V E + +M+ KG+ P V
Sbjct: 651 GNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN- 709
Query: 372 HTLFLGLFEVHQVEHA---LKLFDEMRRNHVAANTYIYTTFIDGL------CKNGYIVKA 422
+ +V + E A L L D ++++ + Y Y DGL K G+ V A
Sbjct: 710 -----TICDVDKKEVAAPKLVLEDLLKKSCIT--YYAYELLFDGLRDKRLRKKKGFTVVA 762
Query: 423 V 423
+
Sbjct: 763 I 763
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 126/259 (48%), Gaps = 15/259 (5%)
Query: 48 GDITTITPNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLF 107
G T + +AL + D ML+ P V ++N L L KT ++ V+ +K + G
Sbjct: 470 GYSTQLKMENALEILDVMLD-NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 108 PDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGH 167
P+L+ +NIL+ SLC ++ EA L +++ PD T+ TLI+G C+ G
Sbjct: 529 PNLFTFNILL-------ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 168 TIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPN 227
A LF +M E T TY II +K V A++LF +M D + P+
Sbjct: 582 LDGAYTLFRKM-----EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Query: 228 AVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLE 287
TY ++ GFC + N +EMM+ G P++ T +++ LC ++ A+ ++
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 288 LMILRGVKPDTSTYNTLID 306
M+ +G+ P+ NT+ D
Sbjct: 697 RMVQKGLVPE--AVNTICD 713
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 144/316 (45%), Gaps = 14/316 (4%)
Query: 243 DWNEAKHLFIEMMDQ-GVQPNVVTFTVIMDELCKNGKMDGASRLLELM-------ILRGV 294
D +A +F M + G + + T+ ++++L GK + +L M +L GV
Sbjct: 19 DPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV 78
Query: 295 KPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLN 354
Y + Y GK+ A +F M+ C V SY+ +++ + ++
Sbjct: 79 ------YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHK 132
Query: 355 LYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLC 414
+Y +M +GI P V ++ + + AL+L + M N Y T + G
Sbjct: 133 VYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192
Query: 415 KNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVV 474
+ + + ELF + L + ++N L+ LCK G ++ +L + + G++ ++
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 475 TYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRM 534
TYN+ I GLC G++D A + + +G +P+ + +N L+ G +N++ + L +M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 535 DMRNVMPDASTLSIVV 550
+ PD+ T + ++
Sbjct: 313 VNEGLEPDSYTYNTLI 328
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 247/497 (49%), Gaps = 18/497 (3%)
Query: 75 VTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIM 134
V + NI+ L K + V + ++ G++PD+ YN LI+ + G +
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG-------LME 287
Query: 135 EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTV 194
EA L + G P V+TYNT+INGLC+ G A +F EM PD+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG------LSPDST 341
Query: 195 TYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEM 254
TY +++ CKKG V + +++F M+ ++ P+ V ++S++ F + + ++A F +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 255 MDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKI 314
+ G+ P+ V +T+++ C+ G + A L M+ +G D TYNT++ G C +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 315 DRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTL 374
A +LF M D + +ILI+G+CK +++ + L++KM K IR VVTY+TL
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 375 FLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKY 434
G +V ++ A +++ +M + Y+ ++ LC G++ +A ++ +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 435 ELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHG 494
+ ++ N +I G C+ G + G + D ++YN +I+G + M KA G
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 495 LFLDMEAK--GLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDL 552
L ME + GL P+ +N+++ GF R N+ + +L +M R V PD ST + +++
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Query: 553 LVKNEISLNSIPQFKRH 569
V + N F+ H
Sbjct: 702 FVSQD---NLTEAFRIH 715
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 245/480 (51%), Gaps = 13/480 (2%)
Query: 78 FNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAA 137
F++L + + F L S G + A N LI ++ G + A
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG-------WVELAW 220
Query: 138 ALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYT 197
++ ++ G +V+T N ++N LC+ G ++ E GV PD VTY
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ----EKGVY--PDIVTYN 274
Query: 198 TIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQ 257
T+I KG +++A EL M + +P TY ++I G C + AK +F EM+
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 258 GVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRA 317
G+ P+ T+ ++ E CK G + ++ M R V PD +++++ + +G +D+A
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 318 RELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLG 377
F S++ G + D V Y+ILI GYC+ + +NL +ML +G VVTY+T+ G
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 378 LFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELN 437
L + + A KLF+EM + ++Y T IDG CK G + A+ELF+ ++ + L+
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 438 IVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFL 497
+V+YN L+DG K G ++ A E+++ + ++ ++Y+I+++ LC+ G + +A ++
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 498 DMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKNE 557
+M +K ++P +I N+++ G+ R+ S L +M +PD + + ++ V+ E
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 167/348 (47%)
Query: 223 NINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGA 282
N N + LI + A EA F + +G ++ ++ L + G ++ A
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 283 SRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILING 342
+ + + GV + T N +++ C GK+++ ++ G D+V+Y+ LI+
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 343 YCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAAN 402
Y +EE L M KG P V TY+T+ GL + + E A ++F EM R+ ++ +
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 403 TYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFS 462
+ Y + + CK G +V+ ++F +R ++V ++ ++ + G L+ A F+
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 463 SLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNN 522
S+ GL+ D V Y I+I G C G + A L +M +G + V +NT++ G +
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 523 ETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKNEISLNSIPQFKRHK 570
+ +L + M R + PD+ TL+I++D K N++ F++ K
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 141/294 (47%), Gaps = 15/294 (5%)
Query: 75 VTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIM 134
V ++N + L K K LF + LFPD Y ILI+ C +
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID-------GHCKLGNLQ 497
Query: 135 EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTV 194
A LF K++ DV TYNTL++G + G A ++ +M + EI P +
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK--EI----LPTPI 551
Query: 195 TYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEM 254
+Y+ +++ LC KG + +A ++ +M +NI P + S+I G+C + + ++ + +M
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 255 MDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILR--GVKPDTSTYNTLIDGYCLTG 312
+ +G P+ +++ ++ + M A L++ M G+ PD TYN+++ G+C
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 313 KIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRP 366
++ A + M G D +Y+ +ING+ ++ E ++ +ML +G P
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 122/244 (50%), Gaps = 16/244 (6%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
+A+ +F M R R V ++N L K DT ++ + S + P +Y+I
Sbjct: 497 QNAMELFQKMKEKRI-RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
L+N +LC + + EA ++ ++ +P V N++I G CR+G+ +
Sbjct: 556 LVN-------ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 176 EEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDEN--INPNAVTYTS 233
E+M + G V PD ++Y T+I G ++ + KA L KM++E + P+ TY S
Sbjct: 609 EKMISE----GFV--PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 234 LICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRG 293
++ GFC N EA+ + +M+++GV P+ T+T +++ + A R+ + M+ RG
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 294 VKPD 297
PD
Sbjct: 723 FSPD 726
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 83/160 (51%)
Query: 397 NHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEI 456
++ +N ++ I + + +A E F LR + ++I + N LI L + G +E+
Sbjct: 159 SNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVEL 218
Query: 457 AWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLML 516
AW ++ + R G+ +V T NIM++ LC DG+M+K ++ KG+ P+ V +NTL+
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 517 GFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
+ + EL++ M + P T + V++ L K+
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH 318
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 250/518 (48%), Gaps = 33/518 (6%)
Query: 61 VFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCF 120
+FD M + +P +F IL K D L L + S G+ P+ YN ++
Sbjct: 169 LFDEMPE-KGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV--- 224
Query: 121 LQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 180
SS C E R ++ + K+R G PD+ T+N+ I+ LC+ G + A +F +M
Sbjct: 225 ----SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 181 GNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCY 240
E + +P+++TY ++ G CK G ++ AK LF +++ + + +Y + G
Sbjct: 281 D--EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338
Query: 241 ANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTST 300
+ EA+ + +M D+G+ P++ ++ ++MD LCK G + A ++ LM GV PD T
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 301 YNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKML 360
Y L+ GYC GK+D A+ L M N C+ + + +IL++ K + E L RKM
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 361 SKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAA-----NTYI---------- 405
KG VT + + GL +++ A+++ MR + AA N+YI
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 406 --------YTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIA 457
Y+T ++GLCK G +A LF + K + + V+YN I CK G++ A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 458 WELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLG 517
+ + + + G + TYN +I GL Q+ + HGL +M+ KG+ PN +NT +
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 518 FIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVK 555
+ LL M +N+ P+ + +++ K
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 144/549 (26%), Positives = 252/549 (45%), Gaps = 75/549 (13%)
Query: 71 SRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVE 130
++P V +N+L K + + V L+K + G+ P Y +N+LI +LC
Sbjct: 108 NKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIR-------ALCDS 160
Query: 131 SRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCK 190
S + A LF ++ GC+P+ FT+ L+ G C+ G T L L M + GV+
Sbjct: 161 SCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES----FGVL-- 214
Query: 191 PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHL 250
P+ V Y TI+ C++G D ++++ KM++E + P+ VT+ S I C +A +
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274
Query: 251 FIEM-MDQGV---QPNVVTFTVIMDELCKNGKMDGASRLLE------------------- 287
F +M +D+ + +PN +T+ +++ CK G ++ A L E
Sbjct: 275 FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQ 334
Query: 288 ----------------LMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMH 331
M +G+ P +YN L+DG C G + A+ + M+ NG
Sbjct: 335 GLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCP 394
Query: 332 DVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLF 391
D V+Y L++GYC V+ +L ++M+ P T + L L+++ ++ A +L
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 392 DEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYEL--------------- 436
+M +T +DGLC +G + KA+E+ + +R+
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 514
Query: 437 --------NIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQ 488
++++Y+ L++GLCK GR A LF+ + L D V YNI IH C G+
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 489 MDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSI 548
+ A + DME KG + +N+L+LG N+ ++ L+ M + + P+ T +
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 549 VVDLLVKNE 557
+ L + E
Sbjct: 635 AIQYLCEGE 643
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 230/507 (45%), Gaps = 37/507 (7%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVES 131
RP ++N++ K + +LF+ + L +YNI + +++G
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHG------- 340
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKP 191
+ +EA + ++ G P +++YN L++GLC+ G A + M NG VC P
Sbjct: 341 KFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR-NG----VC-P 394
Query: 192 DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
D VTY ++ G C G VD AK L +M N PNA T L+ +EA+ L
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVK---------------- 295
+M ++G + VT +I+D LC +G++D A +++ M + G
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 514
Query: 296 -------PDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKD 348
PD TY+TL++G C G+ A+ LF M D V+Y+I I+ +CK
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 349 VEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTT 408
+ + + M KG ++ TY++L LGL +Q+ L DEM+ ++ N Y T
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 409 FIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVG 468
I LC+ + A L + N+ S+ LI+ CK ++A E+F + +
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSIC 694
Query: 469 LMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVI 528
+ + Y++M + L GQ+ KA L + +G E ++ L+ + +E
Sbjct: 695 GQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753
Query: 529 ELLHRMDMRNVMPDASTLSIVVDLLVK 555
+LH+M R D + L V+D L K
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGK 780
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 226/518 (43%), Gaps = 65/518 (12%)
Query: 75 VTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIM 134
+ S+NI L + + ++ K++ G+ P +Y+YNIL++ LC +
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD-------GLCKLGMLS 378
Query: 135 EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 182
+A + ++ G PD TY L++G C G A +L +EM N
Sbjct: 379 DAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438
Query: 183 ---GEIGVVCKP--------------DTVTYTTIIDGLCKKGFVDKAKELFLKMK----- 220
++G + + DTVT I+DGLC G +DKA E+ M+
Sbjct: 439 HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498
Query: 221 ------------------DENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPN 262
+ N P+ +TY++L+ G C A + EAK+LF EMM + +QP+
Sbjct: 499 ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD 558
Query: 263 VVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFV 322
V + + + CK GK+ A R+L+ M +G TYN+LI G + +I L
Sbjct: 559 SVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMD 618
Query: 323 SMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVH 382
M+ G ++ +Y+ I C+ + VE+ NL +M+ K I P V ++ L +V
Sbjct: 619 EMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVP 678
Query: 383 QVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYN 442
+ A ++F E + +Y+ + L G ++KA EL + +EL Y
Sbjct: 679 DFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYK 737
Query: 443 CLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGL---FLDM 499
L++ LCK LE+A + + G D +I GL G +A+ ++M
Sbjct: 738 DLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEM 797
Query: 500 EAKGLEPNFVIFNTLMLGFIRNNET--SKVIELLHRMD 535
+ G N V N + ++N+ + +LHR D
Sbjct: 798 ASVGEVANKVDPNARDIHQKKHNKNGGNNWQNILHRDD 835
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 250/513 (48%), Gaps = 52/513 (10%)
Query: 74 PVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRI 133
P T ++ G + + D ++ K + ++G P++ Y LI FLQN SR
Sbjct: 417 PYTYGTVVKG-MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN-------SRF 468
Query: 134 MEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDT 193
+A + +++ G PD+F YN+LI GL + A + EM NG KP+
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE-NG-----LKPNA 522
Query: 194 VTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIE 253
TY I G + A + +M++ + PN V T LI +C EA +
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582
Query: 254 MMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGK 313
M+DQG+ + T+TV+M+ L KN K+D A + M +G+ PD +Y LI+G+ G
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 314 IDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHT 373
+ +A +F M G +V+ Y++L+ G+C++ ++E+ L +M KG+ P VTY T
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 374 LFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRT----- 428
+ G + + A +LFDEM+ + ++++YTT +DG C+ + +A+ +F T
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 429 --------------LRILKYEL-------------------NIVSYNCLIDGLCKHGRLE 455
+ K EL N V+YN +ID LCK G LE
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 456 IAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLM 515
A ELF + LM V+TY +++G G+ + +F + A G+EP+ ++++ ++
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 516 LGFIRNNETSKVIELLHRMDMRNVMPDASTLSI 548
F++ T+K + L+ +M +N + D LSI
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 231/493 (46%), Gaps = 36/493 (7%)
Query: 88 TKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFG 147
T + D L L + + GL P Y Y++LI+ LC R+ +A +L ++ G
Sbjct: 255 TLNVDGALKLKESMICKGLVPLKYTYDVLID-------GLCKIKRLEDAKSLLVEMDSLG 307
Query: 148 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG-------------------------- 181
D TY+ LI+GL + + A L EM +
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 182 ---NGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGF 238
+G I P Y ++I+G C++ V + EL ++MK NI + TY +++ G
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Query: 239 CYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDT 298
C + D + A ++ EM+ G +PNVV +T ++ +N + A R+L+ M +G+ PD
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 299 STYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRK 358
YN+LI G ++D AR V M NG + +Y I+GY + + ++
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 359 MLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGY 418
M G+ P V L + +V A + M + + YT ++GL KN
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 419 IVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNI 478
+ A E+FR +R ++ SY LI+G K G ++ A +F + GL +V+ YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 479 MIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRN 538
++ G C G+++KA L +M KGL PN V + T++ G+ ++ + ++ L M ++
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 539 VMPDASTLSIVVD 551
++PD+ + +VD
Sbjct: 728 LVPDSFVYTTLVD 740
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 227/475 (47%), Gaps = 18/475 (3%)
Query: 85 LAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLR 144
++K + +LF + ++GL P AY LI + C E + + L +++
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY-------CREKNVRQGYELLVEMK 409
Query: 145 VFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLC 204
+TY T++ G+C +G A N+ +EM I C+P+ V YTT+I
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM------IASGCRPNVVIYTTLIKTFL 463
Query: 205 KKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVV 264
+ A + +MK++ I P+ Y SLI G A +EA+ +EM++ G++PN
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523
Query: 265 TFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSM 324
T+ + + + A + ++ M GV P+ LI+ YC GK+ A + SM
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 325 ESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQV 384
G + D +Y++L+NG K V++ ++R+M KGI P V +Y L G ++ +
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643
Query: 385 EHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCL 444
+ A +FDEM + N IY + G C++G I KA EL + + N V+Y +
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 445 IDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGL 504
IDG CK G L A+ LF + GL+ D Y ++ G C +++A +F KG
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGC 762
Query: 505 EPNFVIFNTLMLGFIRNNETSKVIELLHR-MDM---RNVMPDASTLSIVVDLLVK 555
+ FN L+ + +T E+L+R MD R P+ T +I++D L K
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 145/642 (22%), Positives = 247/642 (38%), Gaps = 158/642 (24%)
Query: 55 PNDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRL------------- 101
P+ L F+++ + + + + SF+ L L ++ LS+ +R+
Sbjct: 77 PSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSS 136
Query: 102 ------NSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTY 155
G D + IL + ++ G I EA +F+ P +
Sbjct: 137 IVRCSQEFVGKSDDGVLFGILFDGYIAKG-------YIEEAVFVFSSSMGLELVPRLSRC 189
Query: 156 NTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKEL 215
L++ L R L+LF ++ G E VV D TY +I C+ G V K++
Sbjct: 190 KVLLDALLRWNR----LDLFWDVYKGMVERNVVF--DVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 216 FLKMKDE------NIN---------------PNAVTYTSLICGFCYANDWNEAKHLFIEM 254
K + E N++ P TY LI G C +AK L +EM
Sbjct: 244 LFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 255 MDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKI 314
GV + T+++++D L K D A L+ M+ G+ Y+ I G +
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363
Query: 315 DRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEG---------------------- 352
++A+ LF M ++G + +Y+ LI GYC+ K+V +G
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 353 -------------LNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHV 399
N+ ++M++ G RP VV Y TL + + A+++ EM+ +
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 400 AANTYIYTTFIDGLCK------------------------------NGYI-----VKAVE 424
A + + Y + I GL K +GYI A +
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 425 LFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLC 484
+ +R N V LI+ CK G++ A + S+ G++ D TY ++++GL
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 485 NDGQMDKAHGLFLDMEAK-----------------------------------GLEPNFV 509
+ ++D A +F +M K GL PN +
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 510 IFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
I+N L+ GF R+ E K ELL M ++ + P+A T ++D
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 80/326 (24%)
Query: 58 ALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILI 117
A +FD M+ P V +N+L G ++ + L ++ GL P+ Y +I
Sbjct: 646 ASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 118 NCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEE 177
+ + ++G + EA LF ++++ G PD F Y TL++G CR A+ +F
Sbjct: 705 DGYCKSGD-------LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 178 MANG--------------------------------NGEIGVVCKPDTVTYTTIIDGLCK 205
G +G KP+ VTY +ID LCK
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 206 KGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVT 265
+G ++ AKELF +M++ N+ P +TYTSL+ G+ E +F E + G++P+ +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 266 FTVIM-------------------------DELCK---------------NGKMDGASRL 285
++VI+ D+ CK G+M+ A ++
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 286 LELMILRGVKPDTSTYNTLIDGYCLT 311
+E M+ PD++T LI+ C++
Sbjct: 938 MENMVRLQYIPDSATVIELINESCIS 963
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 69 RPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLC 128
R +P ++NI+ L K + + LF ++ + L P + Y L+N + + G
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG---- 854
Query: 129 VESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVV 188
R E +F + G EPD Y+ +IN + G T AL L ++M N +
Sbjct: 855 ---RRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA-VDDG 910
Query: 189 CKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYAND 243
CK T ++ G K G ++ A+++ M P++ T LI C +++
Sbjct: 911 CKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 232/478 (48%), Gaps = 13/478 (2%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESR 132
P V +FN + L YD +++ G+ P L Y+IL+ L R
Sbjct: 306 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK-------GLTRAKR 358
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPD 192
I +A + ++ G P+V YN LI+ G A+ + + M + +
Sbjct: 359 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL------T 412
Query: 193 TVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFI 252
+ TY T+I G CK G D A+ L +M N N ++TS+IC C ++ A
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472
Query: 253 EMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTG 312
EM+ + + P T ++ LCK+GK A L + +G DT T N L+ G C G
Sbjct: 473 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 532
Query: 313 KIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYH 372
K+D A + + GC+ D VSY+ LI+G C K ++E +M+ +G++P TY
Sbjct: 533 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 592
Query: 373 TLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRIL 432
L GLF +++VE A++ +D+ +RN + + Y Y+ IDG CK + E F +
Sbjct: 593 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 652
Query: 433 KYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKA 492
+ N V YN LI C+ GRL +A EL + G+ + TY +I G+ ++++A
Sbjct: 653 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 712
Query: 493 HGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVV 550
LF +M +GLEPN + L+ G+ + + KV LL M +NV P+ T ++++
Sbjct: 713 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 770
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 229/494 (46%), Gaps = 36/494 (7%)
Query: 57 DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNIL 116
D +F + R P + +++IL L + K + K + G P++ YN L
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384
Query: 117 INCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 176
I+ F++ GS ++ +E L G TYNTLI G C+ G A L +
Sbjct: 385 IDSFIEAGSL----NKAIEIKDLMVSK---GLSLTSSTYNTLIKGYCKNGQADNAERLLK 437
Query: 177 EM------ANGNGEIGVVC-----------------------KPDTVTYTTIIDGLCKKG 207
EM N V+C P TT+I GLCK G
Sbjct: 438 EMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 497
Query: 208 FVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFT 267
KA EL+ + ++ + T +L+ G C A +EA + E++ +G + V++
Sbjct: 498 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 557
Query: 268 VIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESN 327
++ C K+D A L+ M+ RG+KPD TY+ LI G K++ A + + + N
Sbjct: 558 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 617
Query: 328 GCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHA 387
G + DV +YS++I+G CK + EEG + +M+SK ++P V Y+ L ++ A
Sbjct: 618 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 677
Query: 388 LKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDG 447
L+L ++M+ ++ N+ YT+ I G+ + +A LF +R+ E N+ Y LIDG
Sbjct: 678 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 737
Query: 448 LCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPN 507
K G++ L + + + +TY +MI G DG + +A L +M KG+ P+
Sbjct: 738 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 797
Query: 508 FVIFNTLMLGFIRN 521
+ + + G+++
Sbjct: 798 SITYKEFIYGYLKQ 811
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 237/525 (45%), Gaps = 42/525 (8%)
Query: 58 ALCVFDYMLN--MRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
AL VF + N M PS+ T+ NIL L + + F + G+ PD+Y +
Sbjct: 223 ALDVFPVLANKGMFPSK---TTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTT 278
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
IN F + G ++ EA LF+K+ G P+V T+NT+I+GL G A
Sbjct: 279 AINAFCKGG-------KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 331
Query: 176 EEM---------------------ANGNGEIGVVCK--------PDTVTYTTIIDGLCKK 206
E+M A G+ V K P+ + Y +ID +
Sbjct: 332 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 391
Query: 207 GFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTF 266
G ++KA E+ M + ++ + TY +LI G+C + A+ L EM+ G N +F
Sbjct: 392 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451
Query: 267 TVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMES 326
T ++ LC + D A R + M+LR + P TLI G C GK +A EL+ +
Sbjct: 452 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 511
Query: 327 NGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEH 386
G + D + + L++G C+ ++E + +++L +G V+Y+TL G +++
Sbjct: 512 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 571
Query: 387 ALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLID 446
A DEM + + + Y Y+ I GL + +A++ + + ++ +Y+ +ID
Sbjct: 572 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 631
Query: 447 GLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEP 506
G CK R E E F + + + V YN +I C G++ A L DM+ KG+ P
Sbjct: 632 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 691
Query: 507 NFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
N + +L+ G + + L M M + P+ + ++D
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 213/425 (50%), Gaps = 13/425 (3%)
Query: 136 AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCK---PD 192
A +F L G P T N L+ L R N F++ VVCK PD
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRA-------NEFQKCCEA---FDVVCKGVSPD 272
Query: 193 TVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFI 252
+TT I+ CK G V++A +LF KM++ + PN VT+ ++I G ++EA
Sbjct: 273 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 332
Query: 253 EMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTG 312
+M+++G++P ++T+++++ L + ++ A +L+ M +G P+ YN LID + G
Sbjct: 333 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 392
Query: 313 KIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYH 372
+++A E+ M S G +Y+ LI GYCK + L ++MLS G ++
Sbjct: 393 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 452
Query: 373 TLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRIL 432
++ L + AL+ EM +++ + TT I GLCK+G KA+EL+
Sbjct: 453 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 512
Query: 433 KYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKA 492
+ ++ + N L+ GLC+ G+L+ A+ + + G + D V+YN +I G C ++D+A
Sbjct: 513 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 572
Query: 493 HGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDL 552
+M +GL+P+ ++ L+ G N+ + I+ ++PD T S+++D
Sbjct: 573 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632
Query: 553 LVKNE 557
K E
Sbjct: 633 CCKAE 637
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 168/356 (47%), Gaps = 16/356 (4%)
Query: 67 NMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSS 126
NM P +T+ L L K + L L+ + + G D N L++
Sbjct: 478 NMSPGGGLLTT---LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH-------G 527
Query: 127 LCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIG 186
LC ++ EA + ++ GC D +YNTLI+G C A +EM
Sbjct: 528 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG---- 583
Query: 187 VVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNE 246
KPD TY+ +I GL V++A + + K + P+ TY+ +I G C A E
Sbjct: 584 --LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641
Query: 247 AKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLID 306
+ F EMM + VQPN V + ++ C++G++ A L E M +G+ P+++TY +LI
Sbjct: 642 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 701
Query: 307 GYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRP 366
G + +++ A+ LF M G +V Y+ LI+GY K + + L R+M SK + P
Sbjct: 702 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 761
Query: 367 TVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKA 422
+TY + G V A +L +EMR + ++ Y FI G K G +++A
Sbjct: 762 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 147/315 (46%), Gaps = 13/315 (4%)
Query: 79 NILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAA 138
N L L + D + K + G D +YN LI S C + ++ EA
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI-------SGCCGKKKLDEAFM 574
Query: 139 LFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTT 198
++ G +PD +TY+ LI GL A+ +++ NG + PD TY+
Sbjct: 575 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR-NGML-----PDVYTYSV 628
Query: 199 IIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQG 258
+IDG CK ++ +E F +M +N+ PN V Y LI +C + + A L +M +G
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688
Query: 259 VQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRAR 318
+ PN T+T ++ + +++ A L E M + G++P+ Y LIDGY G++ +
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 748
Query: 319 ELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGL 378
L M S + ++Y+++I GY + +V E L +M KGI P +TY G
Sbjct: 749 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 808
Query: 379 FEVHQVEHALKLFDE 393
+ V A K DE
Sbjct: 809 LKQGGVLEAFKGSDE 823
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 215/428 (50%), Gaps = 13/428 (3%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVES 131
+P V ++N L K D + R+ S PD YNI+I SLC
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI-------GSLCSRG 207
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKP 191
++ A + +L C+P V TY LI G AL L +EM + KP
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM------LSRGLKP 261
Query: 192 DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
D TY TII G+CK+G VD+A E+ ++ + P+ ++Y L+ W E + L
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLT 311
+M + PNVVT+++++ LC++GK++ A LL+LM +G+ PD +Y+ LI +C
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381
Query: 312 GKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTY 371
G++D A E +M S+GC+ D+V+Y+ ++ CK ++ L ++ K+ G P +Y
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 372 HTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRI 431
+T+F L+ AL + EM N + + Y + I LC+ G + +A EL +R
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 432 LKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDK 491
++ ++V+YN ++ G CK R+E A + S+ G + TY ++I G+ G +
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Query: 492 AHGLFLDM 499
A L D+
Sbjct: 562 AMELANDL 569
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 228/467 (48%), Gaps = 18/467 (3%)
Query: 87 KTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCF--LQNGSSLCVESRIMEAAALFTKLR 144
++ +Y L L + + G PD+ LI F L+N I +A + L
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN---------IPKAVRVMEILE 151
Query: 145 VFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLC 204
FG +PDVF YN LING C+ A + + M + + PDTVTY +I LC
Sbjct: 152 KFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGSLC 204
Query: 205 KKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVV 264
+G +D A ++ ++ +N P +TYT LI +EA L EM+ +G++P++
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 265 TFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSM 324
T+ I+ +CK G +D A ++ + L+G +PD +YN L+ GK + +L M
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 325 ESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQV 384
S C +VV+YSILI C+ +EE +NL + M KG+ P +Y L ++
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 385 EHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCL 444
+ A++ + M + + Y T + LCKNG +A+E+F L + N SYN +
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 445 IDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGL 504
L G A + + G+ D +TYN MI LC +G +D+A L +DM +
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 505 EPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVD 551
P+ V +N ++LGF + + I +L M P+ +T +++++
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 204/423 (48%), Gaps = 13/423 (3%)
Query: 108 PDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGH 167
PD++AYN LIN F C +RI +A + ++R PD TYN +I LC G
Sbjct: 156 PDVFAYNALINGF-------CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 168 TIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPN 227
+AL + ++ + N C+P +TYT +I+ +G VD+A +L +M + P+
Sbjct: 209 LDLALKVLNQLLSDN------CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
Query: 228 AVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLE 287
TY ++I G C + A + + +G +P+V+++ +++ L GK + +L+
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Query: 288 LMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTK 347
M P+ TY+ LI C GKI+ A L M+ G D SY LI +C+
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 348 DVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYT 407
++ + M+S G P +V Y+T+ L + + + AL++F ++ + N+ Y
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 408 TFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRV 467
T L +G ++A+ + + + + ++YN +I LC+ G ++ A+EL +
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Query: 468 GLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKV 527
VVTYNI++ G C +++ A + M G PN + L+ G ++
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Query: 528 IEL 530
+EL
Sbjct: 563 MEL 565
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 189/393 (48%), Gaps = 7/393 (1%)
Query: 163 CRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDE 222
CR+G+ I +L+L E M PD + T +I G + KA + +++ ++
Sbjct: 100 CRSGNYIESLHLLETMVRKG------YNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEK 152
Query: 223 NINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGA 282
P+ Y +LI GFC N ++A + M + P+ VT+ +++ LC GK+D A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 283 SRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILING 342
++L ++ +P TY LI+ L G +D A +L M S G D+ +Y+ +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 343 YCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAAN 402
CK V+ + R + KG P V++Y+ L L + E KL +M N
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 403 TYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFS 462
Y+ I LC++G I +A+ L + ++ + SY+ LI C+ GRL++A E
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 463 SLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNN 522
++ G + D+V YN ++ LC +G+ D+A +F + G PN +NT+ +
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 523 ETSKVIELLHRMDMRNVMPDASTLSIVVDLLVK 555
+ + + ++ M + PD T + ++ L +
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 161/318 (50%), Gaps = 1/318 (0%)
Query: 239 CYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDT 298
C + ++ E+ HL M+ +G P+V+ T ++ + A R++E++ G +PD
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 299 STYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRK 358
YN LI+G+C +ID A + M S D V+Y+I+I C ++ L + +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 359 MLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGY 418
+LS +PTV+TY L V+ ALKL DEM + + + Y T I G+CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 419 IVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNI 478
+ +A E+ R L + E +++SYN L+ L G+ E +L + + +VVTY+I
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 479 MIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRN 538
+I LC DG++++A L M+ KGL P+ ++ L+ F R IE L M
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 539 VMPDASTLSIVVDLLVKN 556
+PD + V+ L KN
Sbjct: 399 CLPDIVNYNTVLATLCKN 416
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 161/360 (44%), Gaps = 48/360 (13%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVES 131
+P V ++ IL D L L + S GL PD++ YN +I +C E
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR-------GMCKEG 277
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKP 191
+ A + L + GCEPDV +YN L+ L G L +M + C P
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK------CDP 331
Query: 192 DTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLF 251
+ VTY+ +I LC+ G +++A L MK++ + P+A +Y LI FC + A
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 252 IEMMDQGVQPNVVTFTVIMDELCKNGKMDGA----SRLLEL------------------- 288
M+ G P++V + ++ LCKNGK D A +L E+
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 289 ------------MILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSY 336
M+ G+ PD TYN++I C G +D A EL V M S VV+Y
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 337 SILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRR 396
+I++ G+CK +E+ +N+ M+ G RP TY L G+ A++L +++ R
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 150/480 (31%), Positives = 239/480 (49%), Gaps = 13/480 (2%)
Query: 77 SFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEA 136
S+N L L K++ + +++R+ G P L Y+ L+ L I
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM-------VGLGKRRDIDSV 242
Query: 137 AALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTY 196
L ++ G +P+V+T+ I L R G A + + M + C PD VTY
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------CGPDVVTY 296
Query: 197 TTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMD 256
T +ID LC +D AKE+F KMK P+ VTY +L+ F D + K + EM
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 257 QGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDR 316
G P+VVTFT+++D LCK G A L++M +G+ P+ TYNTLI G ++D
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 317 ARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFL 376
A ELF +MES G +Y + I+ Y K+ D L + KM +KGI P +V +
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 377 GLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYEL 436
L + + A ++F ++ + ++ Y + K G I +A++L + E
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 437 NIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLF 496
+++ N LI+ L K R++ AW++F + + L VVTYN ++ GL +G++ +A LF
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 497 LDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
M KG PN + FNTL +N+E + +++L +M +PD T + ++ LVKN
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 239/499 (47%), Gaps = 50/499 (10%)
Query: 57 DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNIL 116
+A+ V+ M+ + RP + +++ L L K + D+V+ L K + + GL P++Y + I
Sbjct: 206 EAMEVYRRMI-LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTIC 264
Query: 117 INCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 176
I + G +I EA + ++ GC PDV TY LI+ LC A +FE
Sbjct: 265 IRVLGRAG-------KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317
Query: 177 EMANGNGEIGVVCKPDTVTY-----------------------------------TTIID 201
+M G KPD VTY T ++D
Sbjct: 318 KMKTGRH------KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 202 GLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQP 261
LCK G +A + M+D+ I PN TY +LICG + ++A LF M GV+P
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 262 NVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELF 321
T+ V +D K+G A E M +G+ P+ N + G+ A+++F
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 322 VSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEV 381
++ G + D V+Y++++ Y K +++E + L +M+ G P V+ ++L L++
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 382 HQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSY 441
+V+ A K+F M+ + Y T + GL KNG I +A+ELF + N +++
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 442 NCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEA 501
N L D LCK+ + +A ++ + +G + DV TYN +I GL +GQ+ +A F M+
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK- 670
Query: 502 KGLEPNFVIFNTLMLGFIR 520
K + P+FV TL+ G ++
Sbjct: 671 KLVYPDFVTLCTLLPGVVK 689
Score = 218 bits (556), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 227/450 (50%), Gaps = 6/450 (1%)
Query: 118 NCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEE 177
N +L SL V+ + +A K+R FG + ++YN LI+ L ++ A+ ++
Sbjct: 154 NTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 213
Query: 178 MANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICG 237
M I +P TY++++ GL K+ +D L +M+ + PN T+T I
Sbjct: 214 M------ILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267
Query: 238 FCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPD 297
A NEA + M D+G P+VVT+TV++D LC K+D A + E M KPD
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 298 TSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYR 357
TY TL+D + +D ++ + ME +G + DVV+++IL++ CK + E +
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 358 KMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNG 417
M +GI P + TY+TL GL VH+++ AL+LF M V Y Y FID K+G
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 418 YIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYN 477
V A+E F ++ NIV+ N + L K GR A ++F L +GL+ D VTYN
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 478 IMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMR 537
+M+ G++D+A L +M G EP+ ++ N+L+ + + + ++ RM
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 538 NVMPDASTLSIVVDLLVKNEISLNSIPQFK 567
+ P T + ++ L KN +I F+
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 249/524 (47%), Gaps = 59/524 (11%)
Query: 72 RPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVES 131
P V N L L K D +F R+ L P + YN L+ +NG
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG------- 587
Query: 132 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEIGVVCK 190
+I EA LF + GC P+ T+NTL + LC+ +AL LF+ M G C
Sbjct: 588 KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG-------CV 640
Query: 191 PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYA--------- 241
PD TY TII GL K G V +A F +MK + + P+ VT +L+ G A
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 242 ------NDWNEAKHLFIE------MMDQGVQPNVVTFT--VIMDELCKNG---------- 277
N ++ +LF E + + G+ N V+F+ ++ + +C++G
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 278 -----KMDGASRLLELMILR-GVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMH 331
+ GA L E GV+P TYN LI G I+ A+++F+ ++S GC+
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 332 DVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLF 391
DV +Y+ L++ Y K+ ++E LY++M + +T++ + GL + V+ AL L+
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 392 -DEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCK 450
D M + Y IDGL K+G + +A +LF + N YN LI+G K
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 451 HGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVI 510
G + A LF + + G+ D+ TY++++ LC G++D+ F +++ GL P+ V
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 511 FNTLMLGFIRNNETSKVIELLHRMDM-RNVMPDASTL-SIVVDL 552
+N ++ G +++ + + L + M R + PD T S++++L
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 220/490 (44%), Gaps = 28/490 (5%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESR 132
P ++N++ C +K D + L + G PD+ N LIN +L R
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN-------TLYKADR 553
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPD 192
+ EA +F +++ +P V TYNTL+ GL + G A+ LFE M C P+
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG------CPPN 607
Query: 193 TVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFI 252
T+T+ T+ D LCK V A ++ KM D P+ TY ++I G EA F
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA-MCFF 666
Query: 253 EMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGV-KPDTSTYNTLIDGYCLT 311
M + V P+ VT ++ + K ++ A +++ + +P + LI
Sbjct: 667 HQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAE 726
Query: 312 GKIDRARELFVSMESNGCMHDVVSYSILINGY-CKTKDVEEGLNLYRKMLSK-GIRPTVV 369
ID A + +NG D S + I Y CK +V L+ K G++P +
Sbjct: 727 AGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLP 786
Query: 370 TYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTL 429
TY+ L GL E +E A +F +++ + Y +D K+G I + EL++ +
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 430 RILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMAD------VVTYNIMIHGL 483
+ E N +++N +I GL K G ++ A +L+ L M+D TY +I GL
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDL-----MSDRDFSPTACTYGPLIDGL 901
Query: 484 CNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDA 543
G++ +A LF M G PN I+N L+ GF + E L RM V PD
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 544 STLSIVVDLL 553
T S++VD L
Sbjct: 962 KTYSVLVDCL 971
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 188/353 (53%), Gaps = 18/353 (5%)
Query: 96 SLFKRLNST-GLFPDLYAYNILINCFLQNGSSLCVESRIMEAAA-LFTKLRVFGCEPDVF 153
+LF++ G+ P L YN+LI L E+ ++E A +F +++ GC PDV
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLL--------EADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 154 TYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAK 213
TYN L++ ++G L++EM+ C+ +T+T+ +I GL K G VD A
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHE------CEANTITHNIVISGLVKAGNVDDAL 875
Query: 214 ELFLK-MKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDE 272
+L+ M D + +P A TY LI G + EAK LF M+D G +PN + ++++
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 273 LCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHD 332
K G+ D A L + M+ GV+PD TY+ L+D C+ G++D F ++ +G D
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 333 VVSYSILINGYCKTKDVEEGLNLYRKM-LSKGIRPTVVTYHTLFLGLFEVHQVEHALKLF 391
VV Y+++ING K+ +EE L L+ +M S+GI P + TY++L L L VE A K++
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 392 DEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCL 444
+E++R + N + + I G +G A +++T+ + N +Y L
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 152/550 (27%), Positives = 251/550 (45%), Gaps = 47/550 (8%)
Query: 29 KDRASLETFLRERFKSSGEGDITTITP-NDALC-------VFDYMLNMRPSR--PPVTSF 78
+D S++ F E K D+ T T DALC FD + MR P + ++
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 79 NILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSLCVESRIMEAAA 138
N L L + D L LF + S G+ P Y Y + I+ + ++G S+ A
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV-------SALE 454
Query: 139 LFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTT 198
F K++ G P++ N + L + G A +F G +IG+V PD+VTY
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY----GLKDIGLV--PDSVTYNM 508
Query: 199 IIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQG 258
++ K G +D+A +L +M + P+ + SLI A+ +EA +F+ M +
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 259 VQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRAR 318
++P VVT+ ++ L KNGK+ A L E M+ +G P+T T+NTL D C ++ A
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 319 ELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGL 378
++ M GC+ DV +Y+ +I G K V+E + + +M K + P VT TL G+
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGV 687
Query: 379 FEVHQVEHALKLFDEMRRN--HVAANTYIYTTFIDGLCKNGYIVKAVELFRTL------- 429
+ +E A K+ N AN + + I + I AV L
Sbjct: 688 VKASLIEDAYKIITNFLYNCADQPANLF-WEDLIGSILAEAGIDNAVSFSERLVANGICR 746
Query: 430 ---RILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPR-VGLMADVVTYNIMIHGLCN 485
IL + I+ Y+C KH + A LF + +G+ + TYN++I GL
Sbjct: 747 DGDSIL---VPIIRYSC------KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797
Query: 486 DGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDAST 545
++ A +FL +++ G P+ +N L+ + ++ + ++ EL M + T
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857
Query: 546 LSIVVDLLVK 555
+IV+ LVK
Sbjct: 858 HNIVISGLVK 867
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 234/524 (44%), Gaps = 43/524 (8%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
+A+ +F+ M+ + P +FN LF CL K L + ++ G PD++ YN
Sbjct: 590 QEAIELFEGMVQ-KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRT-----GHTIV 170
+I ++NG ++ EA F +++ PD T TL+ G+ + + I+
Sbjct: 649 IIFGLVKNG-------QVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKII 700
Query: 171 A----------LNLFEEMANGN--GEIGV--------------VCKPDTVTYTTIIDGLC 204
NLF E G+ E G+ +C+ II C
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC 760
Query: 205 KKGFVDKAKELFLKM-KDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNV 263
K V A+ LF K KD + P TY LI G A+ A+ +F+++ G P+V
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 264 VTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVS 323
T+ ++D K+GK+D L + M + +T T+N +I G G +D A +L+
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 324 MESNGCMHDVV-SYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVH 382
+ S+ +Y LI+G K+ + E L+ ML G RP Y+ L G +
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 383 QVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYN 442
+ + A LF M + V + Y+ +D LC G + + + F+ L+ ++V YN
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 443 CLIDGLCKHGRLEIAWELFSSLPRV-GLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEA 501
+I+GL K RLE A LF+ + G+ D+ TYN +I L G +++A ++ +++
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Query: 502 KGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDAST 545
GLEPN FN L+ G+ + + + M P+ T
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 160/341 (46%), Gaps = 35/341 (10%)
Query: 265 TFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSM 324
T +++ L +GK++ + + +LM R +K DT+TY T+ + G + +A M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 325 ESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQV 384
G + + SY+ LI+ K++ E + +YR+M+ +G RP++ TY +L +GL + +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 385 EHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCL 444
+ + L EM + N Y +T I L + G I +A E+ + + ++V+Y L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 445 IDGLCKHGRLEIAWELF-----------------------------------SSLPRVGL 469
ID LC +L+ A E+F S + + G
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 470 MADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIE 529
+ DVVT+ I++ LC G +A M +G+ PN +NTL+ G +R + +E
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 530 LLHRMDMRNVMPDASTLSIVVDLLVKNEISLNSIPQFKRHK 570
L M+ V P A T + +D K+ S++++ F++ K
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 15/265 (5%)
Query: 79 NILFGCLAKTKHYDTVLSLFKRLNSTGLF-PDLYAYNILINCFLQNGSSLCVESRIMEAA 137
NI+ L K + D L L+ L S F P Y LI+ ++G R+ EA
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG-------RLYEAK 911
Query: 138 ALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYT 197
LF + +GC P+ YN LING + G A LF+ M + GV +PD TY+
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV----KEGV--RPDLKTYS 965
Query: 198 TIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEM-MD 256
++D LC G VD+ F ++K+ +NP+ V Y +I G ++ EA LF EM
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 257 QGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDR 316
+G+ P++ T+ ++ L G ++ A ++ + G++P+ T+N LI GY L+GK +
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085
Query: 317 ARELFVSMESNGCMHDVVSYSILIN 341
A ++ +M + G + +Y L N
Sbjct: 1086 AYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 179/394 (45%), Gaps = 5/394 (1%)
Query: 149 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGF 208
+PD+ + + GL T + + F+ +A G + +V +T Y +++ L G
Sbjct: 79 KPDLSSSEEVTRGLKSFPDTDSSFSYFKSVA---GNLNLVHTTETCNY--MLEALRVDGK 133
Query: 209 VDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTV 268
+++ +F M+ I + TY ++ +A + +M + G N ++
Sbjct: 134 LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193
Query: 269 IMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNG 328
++ L K+ A + MIL G +P TY++L+ G ID L ME+ G
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 329 CMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHAL 388
+V +++I I + + E + ++M +G P VVTY L L +++ A
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 389 KLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGL 448
++F++M+ + Y T +D N + + + + + ++V++ L+D L
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 449 CKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNF 508
CK G A++ + G++ ++ TYN +I GL ++D A LF +ME+ G++P
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 509 VIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPD 542
+ + + ++ ++ +E +M + + P+
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 14/250 (5%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
+DAL ++ +++ R P ++ L L+K+ LF+ + G P+ YNI
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
LIN F + G + A ALF ++ G PD+ TY+ L++ LC G L+ F
Sbjct: 932 LINGFGKAGEA-------DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 176 EEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMK-DENINPNAVTYTSL 234
+E+ E G+ PD V Y II+GL K +++A LF +MK I P+ TY SL
Sbjct: 985 KELK----ESGL--NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 235 ICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGV 294
I A EA ++ E+ G++PNV TF ++ +GK + A + + M+ G
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Query: 295 KPDTSTYNTL 304
P+T TY L
Sbjct: 1099 SPNTGTYEQL 1108
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 252/509 (49%), Gaps = 47/509 (9%)
Query: 69 RPSRPPVTSFN--ILFGC-LAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNG- 124
R P +SFN + F C L + K + ++ R G PD+ +YN LI+ +NG
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRF---GCEPDVISYNSLIDGHCRNGD 106
Query: 125 ---SSLCVES--------------------------RIMEAAALFTKLRVFGCEPDVFTY 155
+SL +ES ++++ ++ + + C P+V TY
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTY 166
Query: 156 NTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKEL 215
+T I+ C++G +AL F M P+ VT+T +IDG CK G ++ A L
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRD------ALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 216 FLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCK 275
+ +M+ ++ N VTYT+LI GFC + A+ ++ M++ V+PN + +T I+D +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 276 NGKMDGASRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVS 335
G D A + L M+ +G++ D + Y +I G C GK+ A E+ ME + + D+V
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 336 YSILINGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMR 395
++ ++N Y K+ ++ +N+Y K++ +G P VV T+ G+ + Q+ A+ F +
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK 400
Query: 396 RNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLE 455
AN +YT ID LCK G ++ LF + + Y I GLCK G L
Sbjct: 401 -----ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455
Query: 456 IAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLM 515
A++L + + + GL+ D++ Y +I+GL + G M +A +F +M G+ P+ +F+ L+
Sbjct: 456 DAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515
Query: 516 LGFIRNNETSKVIELLHRMDMRNVMPDAS 544
+ + + +LL M R ++ S
Sbjct: 516 RAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 174/336 (51%), Gaps = 8/336 (2%)
Query: 226 PNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRL 285
P+ ++ S++ C A+ + M G +P+V+++ ++D C+NG + AS +
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 286 LE-LMILRG--VKPDTSTYNTLIDGYCLTGKIDRARELFVSMES--NGCMHDVVSYSILI 340
LE L G KPD ++N+L +G+ K+ E+FV M C +VV+YS I
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGF---SKMKMLDEVFVYMGVMLKCCSPNVVTYSTWI 170
Query: 341 NGYCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVA 400
+ +CK+ +++ L + M + P VVT+ L G + +E A+ L+ EMRR ++
Sbjct: 171 DTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS 230
Query: 401 ANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWEL 460
N YT IDG CK G + +A E++ + + E N + Y +IDG + G + A +
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKF 290
Query: 461 FSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIR 520
+ + G+ D+ Y ++I GLC +G++ +A + DME L P+ VIF T+M + +
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 350
Query: 521 NNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN 556
+ + + H++ R PD LS ++D + KN
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKN 386
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 200/400 (50%), Gaps = 12/400 (3%)
Query: 133 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCKPD 192
+ EA ++LR PD FT N I+ L + I++L + + P
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRG------YTPH 55
Query: 193 TVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWNEAKHLFI 252
++ +++ +CK G V A+++ M P+ ++Y SLI G C D A L +
Sbjct: 56 RSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS-LVL 114
Query: 253 EMMDQG----VQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTLIDGY 308
E + +P++V+F + + K +D + +M L+ P+ TY+T ID +
Sbjct: 115 ESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTF 173
Query: 309 CLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKGIRPTV 368
C +G++ A + F SM+ + +VV+++ LI+GYCK D+E ++LY++M + V
Sbjct: 174 CKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNV 233
Query: 369 VTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRT 428
VTY L G + +++ A +++ M + V N+ +YTT IDG + G A++
Sbjct: 234 VTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAK 293
Query: 429 LRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQ 488
+ L+I +Y +I GLC +G+L+ A E+ + + L+ D+V + M++ G+
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 489 MDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVI 528
M A ++ + +G EP+ V +T++ G +N + + I
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI 393
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 131/273 (47%), Gaps = 19/273 (6%)
Query: 56 NDALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNI 115
++A+ MLN + R +T++ ++ L + + + + L PD+ +
Sbjct: 285 DNAMKFLAKMLN-QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 116 LINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 175
++N + ++G R+ A ++ KL G EPDV +T+I+G+ + G A+ F
Sbjct: 344 MMNAYFKSG-------RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Query: 176 EEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLI 235
+ K + V YT +ID LCK+G + + LF K+ + + P+ YTS I
Sbjct: 397 -----------CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445
Query: 236 CGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVK 295
G C + +A L M+ +G+ +++ +T ++ L G M A ++ + M+ G+
Sbjct: 446 AGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGIS 505
Query: 296 PDTSTYNTLIDGYCLTGKIDRARELFVSMESNG 328
PD++ ++ LI Y G + A +L + M+ G
Sbjct: 506 PDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
Query: 384 VEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNC 443
V AL+ +R++ + + I L + + +++ L Y + S+N
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 444 LIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKG 503
++ +CK G+++ A ++ S+PR G DV++YN +I G C +G + A + + A
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 504 ---LEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVKN---E 557
+P+ V FN+L GF + +V + M ++ P+ T S +D K+ +
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 558 ISLNSIPQFKR 568
++L S KR
Sbjct: 181 LALKSFHSMKR 191
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 238/491 (48%), Gaps = 35/491 (7%)
Query: 57 DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNIL 116
DAL VFD M P S++IL L + + L ++ G P Y +L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 117 INCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 176
I +LC I +A LF ++ GC+P+V TY LI+GLCR G
Sbjct: 308 IK-------ALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI-------- 352
Query: 177 EMANGNGEIGVVCK--------PDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNA 228
E ANG VC+ P +TY +I+G CK G V A EL M+ PN
Sbjct: 353 EEANG------VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406
Query: 229 VTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLEL 288
T+ L+ G C +A HL M+D G+ P++V++ V++D LC+ G M+ A +LL
Sbjct: 407 RTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSS 466
Query: 289 MILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKD 348
M ++PD T+ +I+ +C GK D A M G D V+ + LI+G CK
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526
Query: 349 VEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTT 408
+ L + ++ I T + + + L + +V+ L + ++ + + + YTT
Sbjct: 527 TRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTT 586
Query: 409 FIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVG 468
+DGL ++G I + + +++ N+ Y +I+GLC+ GR+E A +L S++ G
Sbjct: 587 LVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 469 LMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGF------IRNN 522
+ + VTY +M+ G N+G++D+A M +G E N I+++L+ GF I N+
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNS 706
Query: 523 ETSKVIELLHR 533
E S V ++ R
Sbjct: 707 EESTVSDIALR 717
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 217/431 (50%), Gaps = 13/431 (3%)
Query: 108 PDLYAYNILINCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGH 167
P+ +Y+ILI+ LC R+ EA L ++ GC+P TY LI LC G
Sbjct: 264 PNSVSYSILIH-------GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 168 TIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPN 227
A NLF+EM I CKP+ TYT +IDGLC+ G +++A + KM + I P+
Sbjct: 317 IDKAFNLFDEM------IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370
Query: 228 AVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLE 287
+TY +LI G+C A L M + +PNV TF +M+ LC+ GK A LL+
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Query: 288 LMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTK 347
M+ G+ PD +YN LIDG C G ++ A +L SM D ++++ +IN +CK
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490
Query: 348 DVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYT 407
+ ML KGI VT TL G+ +V + AL + + + + + +
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550
Query: 408 TFIDGLCKNGYIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRV 467
+D L K + + + + + L ++V+Y L+DGL + G + ++ + +
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610
Query: 468 GLMADVVTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKV 527
G + +V Y I+I+GLC G++++A L M+ G+ PN V + ++ G++ N + +
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Query: 528 IELLHRMDMRN 538
+E + M R
Sbjct: 671 LETVRAMVERG 681
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 219/473 (46%), Gaps = 51/473 (10%)
Query: 128 CVESRIMEAAAL---------FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEM 178
C S +M A L + ++ G + Y T++N LC+ G+T A ++
Sbjct: 162 CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKI 221
Query: 179 ANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDE-NINPNAVTYTSLICG 237
+IG V D+ T+++ G C+ + A ++F M E PN+V+Y+ LI G
Sbjct: 222 L----KIGFVL--DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHG 275
Query: 238 FCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPD 297
C EA L +M ++G QP+ T+TV++ LC G +D A L + MI RG KP+
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPN 335
Query: 298 TSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYR 357
TY LIDG C GKI+ A + M + V++Y+ LINGYCK V L
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLT 395
Query: 358 KMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNG 417
M + +P V T++ L GL V + A+ L M N ++ + Y IDGLC+ G
Sbjct: 396 VMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
Query: 418 YIVKAVELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYN 477
++ A +L ++ E + +++ +I+ CK G+ ++A + R G+ D VT
Sbjct: 456 HMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGT 515
Query: 478 IMIHGLCNDGQMDKA----------------HGL--FLDMEAK----------------- 502
+I G+C G+ A H L LDM +K
Sbjct: 516 TLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL 575
Query: 503 GLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDASTLSIVVDLLVK 555
GL P+ V + TL+ G IR+ + + +L M + +P+ +I+++ L +
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 149/367 (40%), Gaps = 72/367 (19%)
Query: 57 DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNIL 116
DAL + + ++ MR P S N++ L+K L++ ++N GL P + Y L
Sbjct: 529 DALFILETLVKMRILTTP-HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 117 INCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 176
++ +++G + RI+E +++ GC P+V+ Y +INGLC+ G A L
Sbjct: 588 VDGLIRSGD-ITGSFRILEL------MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLS 640
Query: 177 EMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLIC 236
M + GV P+ VTYT ++ G G +D+A E M + N Y+SL+
Sbjct: 641 AMQDS----GV--SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694
Query: 237 GF-----------------------------------------------------CYAND 243
GF C
Sbjct: 695 GFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGR 754
Query: 244 WNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNT 303
+E+ L ++++GV +IM+ C K L+ L++ G P ++
Sbjct: 755 TDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCL 813
Query: 304 LIDGYCLTGKIDRARELFVS-MESNGCMHD--VVSYSILINGYCKTKDVEEGLNLYRKML 360
+I G G +RAREL + + SNG + V++Y + +T D E ++L ++
Sbjct: 814 VIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQLH 873
Query: 361 SKGIRPT 367
+ RPT
Sbjct: 874 CRE-RPT 879
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Query: 363 GIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKA 422
G R Y +L + L ++ A + M + Y T ++ LCKNGY +A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGY-TEA 213
Query: 423 VELFRTLRILKYELNIVSY--NCLIDGLCKHGRLEIAWELFSSLPR-VGLMADVVTYNIM 479
E+F + +ILK + S+ L+ G C+ L A ++F + + V + V+Y+I+
Sbjct: 214 AEMFMS-KILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272
Query: 480 IHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNV 539
IHGLC G++++A GL M KG +P+ + L+ K L M R
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332
Query: 540 MPDASTLSIVVDLLVKN 556
P+ T ++++D L ++
Sbjct: 333 KPNVHTYTVLIDGLCRD 349
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 419 IVKAVELFRTLR-ILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYN 477
++K + F LR + + LN Y+ L+ L K +A+ + + G + ++ Y
Sbjct: 140 MLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYR 199
Query: 478 IMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMR 537
+++ LC +G + A + G + I +L+LGF R +++ M
Sbjct: 200 TIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE 259
Query: 538 -NVMPDASTLSIVV 550
P++ + SI++
Sbjct: 260 VTCAPNSVSYSILI 273
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 244/492 (49%), Gaps = 13/492 (2%)
Query: 67 NMRPSRPPVTS-FNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGS 125
N+ S PP + F+I L +F+++ L P+L N L+ ++ S
Sbjct: 122 NLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPS 181
Query: 126 SLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEI 185
S + S A +F + G +V T+N L+NG C G AL + E M + E
Sbjct: 182 SFSISS----AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS---EF 234
Query: 186 GVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICGFCYANDWN 245
V PD VTY TI+ + KKG + KEL L MK + PN VTY +L+ G+C
Sbjct: 235 KV--NPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK 292
Query: 246 EAKHLFIEMMDQ-GVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNTL 304
EA + +E+M Q V P++ T+ ++++ LC G M L++ M ++PD TYNTL
Sbjct: 293 EAFQI-VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351
Query: 305 IDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLS-KG 363
IDG G AR+L ME++G + V+++I + CK + E ++++ G
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411
Query: 364 IRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAV 423
P +VTYHTL +V + AL++ EM + + NT T +D LCK + +A
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 424 ELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGL 483
L + + ++ V+Y LI G + ++E A E++ + +V + V T+N +I GL
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 484 CNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHRMDMRNVMPDA 543
C+ G+ + A F ++ GL P+ FN+++LG+ + K E + + PD
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 544 STLSIVVDLLVK 555
T +I+++ L K
Sbjct: 592 YTCNILLNGLCK 603
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 238/480 (49%), Gaps = 19/480 (3%)
Query: 57 DALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNIL 116
DAL + + M++ P ++N + ++K + L + GL P+ YN L
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 117 INCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 176
+ + + GS + EA + ++ PD+ TYN LINGLC G L L +
Sbjct: 282 VYGYCKLGS-------LKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMD 334
Query: 177 EMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLIC 236
M + + +PD VTY T+IDG + G +A++L +M+++ + N VT+ +
Sbjct: 335 AMKS------LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Query: 237 GFCYANDWNEAKHLFIEMMD-QGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVK 295
C E++D G P++VT+ ++ K G + GA ++ M +G+K
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 296 PDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNL 355
+T T NT++D C K+D A L S G + D V+Y LI G+ + + VE+ L +
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508
Query: 356 YRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCK 415
+ +M I PTV T+++L GL + E A++ FDE+ + + + + + I G CK
Sbjct: 509 WDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK 568
Query: 416 NGYIVKAVELFRTLRILKYELNIVSYNC--LIDGLCKHGRLEIAWELFSSLPRVGLMADV 473
G + KA E + +K+ +Y C L++GLCK G E A F++L D
Sbjct: 569 EGRVEKAFEFYN--ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDT 625
Query: 474 VTYNIMIHGLCNDGQMDKAHGLFLDMEAKGLEPNFVIFNTLMLGFIRNNETSKVIELLHR 533
VTYN MI C D ++ +A+ L +ME KGLEP+ +N+ + + + + S+ ELL +
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 218/439 (49%), Gaps = 28/439 (6%)
Query: 70 PSRPPVTSFNILFG-C-LAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSL 127
P+R VT N+++G C L K ++ L K+ T + PDL YNILIN L
Sbjct: 273 PNR--VTYNNLVYGYCKLGSLKEAFQIVELMKQ---TNVLPDLCTYNILIN-------GL 320
Query: 128 CVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEIGV 187
C + E L ++ +PDV TYNTLI+G G ++ A L E+M N GV
Sbjct: 321 CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND----GV 376
Query: 188 VCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKD----ENINPNAVTYTSLICGFCYAND 243
K + VT+ + LCK+ +K + + K+K+ +P+ VTY +LI + D
Sbjct: 377 --KANQVTHNISLKWLCKE---EKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 244 WNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGASRLLELMILRGVKPDTSTYNT 303
+ A + EM +G++ N +T I+D LCK K+D A LL RG D TY T
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 304 LIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILINGYCKTKDVEEGLNLYRKMLSKG 363
LI G+ K+++A E++ M+ V +++ LI G C E + + ++ G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 364 IRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAANTYIYTTFIDGLCKNGYIVKAV 423
+ P T++++ LG + +VE A + ++E ++ + Y ++GLCK G KA+
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 424 ELFRTLRILKYELNIVSYNCLIDGLCKHGRLEIAWELFSSLPRVGLMADVVTYNIMIHGL 483
F TL I + E++ V+YN +I CK +L+ A++L S + GL D TYN I L
Sbjct: 612 NFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 484 CNDGQMDKAHGLFLDMEAK 502
DG++ + L K
Sbjct: 671 MEDGKLSETDELLKKFSGK 689
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 195/436 (44%), Gaps = 61/436 (13%)
Query: 73 PPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILINCFLQNGSSL----- 127
P + ++NIL L L L + S L PD+ YN LI+ + G SL
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 128 -----------------------CVESRIMEAAALFTK--LRVFGCEPDVFTYNTLINGL 162
C E + EA K + + G PD+ TY+TLI
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEK-REAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 163 CRTGHTIVALNLFEEMANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDE 222
+ G AL + EM G+ G+ K +T+T TI+D LCK+ +D+A L
Sbjct: 427 LKVGDLSGALEMMREM----GQKGI--KMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 223 NINPNAVTYTSLICGFCYANDWNEAKHLFIEMMDQGVQPNVVTFTVIMDELCKNGKMDGA 282
+ VTY +LI GF +A ++ EM + P V TF ++ LC +GK + A
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 283 SRLLELMILRGVKPDTSTYNTLIDGYCLTGKIDRARELFVSMESNGCMHDVVSYSILING 342
+ + G+ PD ST+N++I GYC G++++A E + + D + +IL+NG
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 343 YCKTKDVEEGLNLYRKMLSKGIRPTVVTYHTLFLGLFEVHQVEHALKLFDEMRRNHVAAN 402
CK E+ LN + ++ + TV TY+T+ + +++ A L EM + +
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 403 TYIYTTFIDGLCKNGYIVKAVELF-----------RTLRI----------LKYELNI--V 439
+ Y +FI L ++G + + EL R L++ K ELN +
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAI 719
Query: 440 SYNCLIDGLCKHGRLE 455
+Y+ +ID LC GRL+
Sbjct: 720 AYSDVIDELCSRGRLK 735
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 38/250 (15%)
Query: 58 ALCVFDYMLNMRPSRPPVTSFNILFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYAYNILI 117
AL ++D M ++ + P V++FN L G L + + F L +GL PD +N +I
Sbjct: 505 ALEMWDEMKKVKIT-PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 118 NCFLQNGSSLCVESRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEE 177
+ C E R+ +A + + +PD +T N L+NGLC+ G T ALN F
Sbjct: 564 LGY-------CKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNT 616
Query: 178 MANGNGEIGVVCKPDTVTYTTIIDGLCKKGFVDKAKELFLKMKDENINPNAVTYTSLICG 237
+ + DTVTY T+I CK + +A +L +M+++ + P+ TY S I
Sbjct: 617 LIEER-------EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Query: 238 FCYANDWNEAKHLFIEM------MDQGVQ-----------------PNVVTFTVIMDELC 274
+E L + M + +Q + ++ ++DELC
Sbjct: 670 LMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELC 729
Query: 275 KNGKMDGASR 284
G++ SR
Sbjct: 730 SRGRLKEHSR 739
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,002,609
Number of Sequences: 539616
Number of extensions: 8399304
Number of successful extensions: 33468
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 18900
Number of HSP's gapped (non-prelim): 3169
length of query: 570
length of database: 191,569,459
effective HSP length: 123
effective length of query: 447
effective length of database: 125,196,691
effective search space: 55962920877
effective search space used: 55962920877
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)