Your job contains 1 sequence.
>038916
MSGRNRGPPLPMKGAPPVGLPLPVHEPQFGRGLGPMPPHPALLEEMRETQFGMGPRPLPP
THPAIIEEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKD
VQMREMYDKSVQLEVDLRGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEIENV
KQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEKRARAAAAVG
NPGASFNTNYGTPEAGYPSNPYPVSYSMNPVQAGAETYPHYGPGPGSWGAYDMQRAQGHR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038916
(300 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2089616 - symbol:AT3G14750 "AT3G14750" species... 903 1.5e-90 1
TAIR|locus:2033681 - symbol:AT1G67170 "AT1G67170" species... 328 1.3e-29 1
TAIR|locus:2035751 - symbol:AT1G55170 "AT1G55170" species... 303 5.7e-27 1
TAIR|locus:2060848 - symbol:AT2G30120 species:3702 "Arabi... 286 3.6e-25 1
TAIR|locus:2156146 - symbol:AT5G61920 "AT5G61920" species... 209 5.3e-17 1
UNIPROTKB|Q9Y592 - symbol:CCDC41 "Coiled-coil domain-cont... 120 0.00029 1
RGD|1311992 - symbol:Cgn "cingulin" species:10116 "Rattus... 119 0.00048 1
UNIPROTKB|F1SNT8 - symbol:DCTN1 "Uncharacterized protein"... 119 0.00080 1
ZFIN|ZDB-GENE-070112-2032 - symbol:pbxip1b "pre-B-cell le... 117 0.00082 1
UNIPROTKB|Q71YL3 - symbol:smC "Chromosome partition prote... 118 0.00095 1
UNIPROTKB|D4A4X4 - symbol:Cgn "Protein Cgn" species:10116... 118 0.00095 1
UNIPROTKB|D4A8U7 - symbol:Dctn1 "Dynactin subunit 1" spec... 118 0.00099 1
>TAIR|locus:2089616 [details] [associations]
symbol:AT3G14750 "AT3G14750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
EMBL:CP002686 EMBL:AY035083 EMBL:AY051034 IPI:IPI00544941
RefSeq:NP_566492.1 UniGene:At.20367 ProteinModelPortal:Q93V84
SMR:Q93V84 PaxDb:Q93V84 PRIDE:Q93V84 EnsemblPlants:AT3G14750.1
GeneID:820703 KEGG:ath:AT3G14750 TAIR:At3g14750 eggNOG:NOG236769
HOGENOM:HOG000242815 InParanoid:Q93V84 OMA:YAENYEH PhylomeDB:Q93V84
ProtClustDB:CLSN2688383 ArrayExpress:Q93V84 Genevestigator:Q93V84
Uniprot:Q93V84
Length = 331
Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
Identities = 187/312 (59%), Positives = 229/312 (73%)
Query: 1 MSGRNRGPPLP-MKGAPPVGLPLPVHEPQFGRGLG----PMPPHPALLEEMRETQFGMGP 55
MSGRNRGPP P MKG GL PVH+P F RGLG P PPHP+++++ RE QF +
Sbjct: 1 MSGRNRGPPPPSMKGGSYSGLQAPVHQPPFVRGLGGGPVPPPPHPSMIDDSREPQFRVDA 60
Query: 56 RPLPPTHPAIIEEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSF 115
R LPP +I+E+ LAAQ+QD+QGLLADNQRLAATHVALKQELEVAQ+ELQR++HY DS
Sbjct: 61 RGLPPQF-SILEDRLAAQNQDVQGLLADNQRLAATHVALKQELEVAQHELQRIMHYIDSL 119
Query: 116 RMDKDVQMREMYDKSVQLEVDLRGVEAMRSELLKVQADIKELTAVRQELT---------- 165
R ++++ MREMYDKS++ E++LR V+AMR+E+ K++ADIKE T+ RQELT
Sbjct: 120 RAEEEIMMREMYDKSMRSEMELREVDAMRAEIQKIRADIKEFTSGRQELTSQVHLMTQDL 179
Query: 166 -----DLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELE 220
DLQQ+P L AEIEN KQELQRARAAI+++KKGYAENYEHG++ME KL++MARELE
Sbjct: 180 ARLTADLQQIPTLTAEIENTKQELQRARAAIDYEKKGYAENYEHGKIMEHKLVAMARELE 239
Query: 221 KLRAEIANSEKXXXXXXXVGNPGA-SFNTNYGTPEAGYPSNPYPVSYSMNPVQAGAETYP 279
KLRAEIANSE VGNPG ++ YG PEAGYP NPY +Y+MNP Q G Y
Sbjct: 240 KLRAEIANSETSAYANGPVGNPGGVAYGGGYGNPEAGYPVNPYQPNYTMNPAQTGVVGY- 298
Query: 280 HYGPGPGSWGAY 291
Y P G A+
Sbjct: 299 -YPPPYGPQAAW 309
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 116/278 (41%), Positives = 161/278 (57%)
Query: 26 EPQFGRGLGPMPPHPALLEEMRETQFGMGPRPLPPTHPAIIEEHLAAQHQDIQGLLADNQ 85
EPQF +PP ++LE+ Q + L + + H+A + Q+++ + Q
Sbjct: 53 EPQFRVDARGLPPQFSILEDRLAAQ-NQDVQGLLADNQRLAATHVALK-QELEVAQHELQ 110
Query: 86 RLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQ-LEVDLRGVEAMR 144
R+ +L+ E E+ E+ Y S R + +++ + +Q + D++ + R
Sbjct: 111 RIMHYIDSLRAEEEIMMREM-----YDKSMRSEMELREVDAMRAEIQKIRADIKEFTSGR 165
Query: 145 SELLKVQADIKELTAVRQELT-DLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYE 203
EL + + +T LT DLQQ+P L AEIEN KQELQRARAAI+++KKGYAENYE
Sbjct: 166 QELT---SQVHLMTQDLARLTADLQQIPTLTAEIENTKQELQRARAAIDYEKKGYAENYE 222
Query: 204 HGQVMEKKLISMARELEKLRAEIANSEKXXXXXXXVGNPGA-SFNTNYGTPEAGYPSNPY 262
HG++ME KL++MARELEKLRAEIANSE VGNPG ++ YG PEAGYP NPY
Sbjct: 223 HGKIMEHKLVAMARELEKLRAEIANSETSAYANGPVGNPGGVAYGGGYGNPEAGYPVNPY 282
Query: 263 PVSYSMNPVQAGAETY--PHYGPGPGSW-GAYDMQRAQ 297
+Y+MNP Q G Y P YGP +W G YD Q+ Q
Sbjct: 283 QPNYTMNPAQTGVVGYYPPPYGP-QAAWAGGYDPQQQQ 319
>TAIR|locus:2033681 [details] [associations]
symbol:AT1G67170 "AT1G67170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 EMBL:BT005883
EMBL:AK228253 IPI:IPI00547288 RefSeq:NP_176888.2 UniGene:At.35681
ProteinModelPortal:Q84TD8 SMR:Q84TD8 IntAct:Q84TD8 PRIDE:Q84TD8
EnsemblPlants:AT1G67170.1 GeneID:843037 KEGG:ath:AT1G67170
TAIR:At1g67170 HOGENOM:HOG000005883 InParanoid:Q84TD8 OMA:MESKGRI
PhylomeDB:Q84TD8 ProtClustDB:CLSN2918424 Genevestigator:Q84TD8
Uniprot:Q84TD8
Length = 359
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 85/254 (33%), Positives = 140/254 (55%)
Query: 25 HEPQFGRGLGPMPPHPALLEEMRETQFGMGPRPLPPTHPAIIEEHLAAQHQDIQGLLADN 84
H FG G +PP A + F M LPP P ++E+ AQH ++Q L +N
Sbjct: 27 HPETFGNH-GAIPPSAA---QGVYPSFNM----LPP--PEVMEQKFVAQHGELQRLAIEN 76
Query: 85 QRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQLEVDLRGVEAMR 144
QRL TH +L+QEL AQ+E+Q + S + +++ +M + +K ++E +L+ EA++
Sbjct: 77 QRLGGTHGSLRQELAAAQHEIQMLHAQIGSMKSEREQRMMGLAEKVAKMETELQKSEAVK 136
Query: 145 SELLKVQADIKELTAVRQEL---------------TDLQQVPALKAEIENVKQELQRARA 189
E+ + +A+ + L R+EL +D+QQ+PAL +E+EN++QE Q+ RA
Sbjct: 137 LEMQQARAEARSLVVAREELMSKVHQLTQELQKSRSDVQQIPALMSELENLRQEYQQCRA 196
Query: 190 AIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEKXXXXXXXVGNPGASFNTN 249
+++KK Y ++ E Q MEK ++MARE+EKL+A++ N+ G P + N N
Sbjct: 197 TYDYEKKFYNDHLESLQAMEKNYMTMAREVEKLQAQLMNNANSDRRA---GGPYGN-NIN 252
Query: 250 YGTPEAGYPS-NPY 262
+G+ S N Y
Sbjct: 253 AEIDASGHQSGNGY 266
>TAIR|locus:2035751 [details] [associations]
symbol:AT1G55170 "AT1G55170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC073944
EMBL:AY084916 EMBL:BT006117 EMBL:AK118721 IPI:IPI00529305
RefSeq:NP_564678.1 UniGene:At.37108 ProteinModelPortal:Q9C717
SMR:Q9C717 PaxDb:Q9C717 PRIDE:Q9C717 EnsemblPlants:AT1G55170.1
GeneID:841960 KEGG:ath:AT1G55170 TAIR:At1g55170 eggNOG:NOG306311
InParanoid:Q9C717 OMA:ELHRMNL PhylomeDB:Q9C717
ProtClustDB:CLSN2688822 ArrayExpress:Q9C717 Genevestigator:Q9C717
Uniprot:Q9C717
Length = 283
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 98/305 (32%), Positives = 157/305 (51%)
Query: 1 MSGRNRGPPLPMKGAPPVGLPLPVHEPQFGRGLGPM--PPHPALLEEMRETQFGMGPRPL 58
MSGRNR ++ + LP P F RG P+ PP P+LLE+++
Sbjct: 1 MSGRNR-IHRDIRDSYHDHRDLPPERP-FLRG-PPLLQPPPPSLLEDLQ----------- 46
Query: 59 PPTHPAIIEEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMD 118
I E + Q +I+ LL+DN LA + L++EL A+ EL RM R +
Sbjct: 47 ------IQEGEIRRQDAEIRRLLSDNHGLADDRMVLERELVAAKEELHRMNLMISDLRAE 100
Query: 119 KDVQMREMYDKSVQLEVDLRGVEAMRSELLKVQADIKELTAVRQELT--------DL--- 167
+D+Q+RE +K +LE D+R +E+ + E +++ ++++L +++EL+ DL
Sbjct: 101 QDLQLREFSEKRHKLEGDVRAMESYKKEASQLRGEVQKLDEIKRELSGNVQLLRKDLAKL 160
Query: 168 ----QQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLR 223
+Q+P ++AE++++++EL AR AIE++KK E E Q MEK ++SMARE+EKLR
Sbjct: 161 QSDNKQIPGMRAEVKDLQKELMHARDAIEYEKKEKFELMEQRQTMEKNMVSMAREVEKLR 220
Query: 224 AEIANSEKXXXXXXXVGNPGASFNTNYGTPEAGYPSNPYPVSYSMNPVQAGA-ETYPHYG 282
AE+A + G S+ NY + + SY N G+ E +Y
Sbjct: 221 AELATVDSRPWGF------GGSYGMNYNNMDGTFRG-----SYGENDTYLGSSERSQYYS 269
Query: 283 PGPGS 287
G GS
Sbjct: 270 HGSGS 274
>TAIR|locus:2060848 [details] [associations]
symbol:AT2G30120 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002685
IPI:IPI00938894 RefSeq:NP_001154541.1 UniGene:At.19562
EnsemblPlants:AT2G30120.2 GeneID:817564 KEGG:ath:AT2G30120
OMA:PEANGTH Uniprot:F4IMQ0
Length = 288
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 65/181 (35%), Positives = 113/181 (62%)
Query: 65 IIEEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMR 124
I+E+ +A QH++IQ LL DNQRLA H+ LK +L VA+ EL+R++ A + + + ++R
Sbjct: 38 ILEDRIAIQHREIQSLLNDNQRLAVAHIGLKDQLNVAKRELERLLETAVKVKAEGEAKVR 97
Query: 125 EMYDKSVQLEVDLRGVEAMRSELLKVQADIKELTAVRQEL-TDL-----QQVPA------ 172
E+Y ++++E + R ++ + +EL +V++D++ L + RQEL T+L + A
Sbjct: 98 EVYQNALRMEAEARVIDGLGAELGQVRSDVQRLGSDRQELATELAMFDDEMAKAKPNSDR 157
Query: 173 ---LKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANS 229
+K EIE ++ E+++ RAA+E +KK A N H + MEK + + RE+ KL E+ +
Sbjct: 158 AIEVKLEIEILRGEIRKGRAALELEKKTRASNLHHERGMEKTIDHLNREIVKLEEELVDL 217
Query: 230 E 230
E
Sbjct: 218 E 218
>TAIR|locus:2156146 [details] [associations]
symbol:AT5G61920 "AT5G61920" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB022212
UniGene:At.55672 EMBL:DQ447104 IPI:IPI00520542
RefSeq:NP_001119474.1 RefSeq:NP_200998.1 PRIDE:Q9FH51
EnsemblPlants:AT5G61920.1 EnsemblPlants:AT5G61920.2 GeneID:836313
KEGG:ath:AT5G61920 TAIR:At5g61920 eggNOG:NOG265125
HOGENOM:HOG000090683 InParanoid:Q9FH51 OMA:KAHIRSI PhylomeDB:Q9FH51
ProtClustDB:CLSN2686951 Genevestigator:Q9FH51 Uniprot:Q9FH51
Length = 238
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 57/180 (31%), Positives = 98/180 (54%)
Query: 65 IIEEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMR 124
I+E +A Q +I L DN++LA+++VALK++L VA E+Q + + D ++Q+R
Sbjct: 52 ILENKIAVQAAEIDRLSNDNRKLASSYVALKEDLTVADREVQGLRAHIRKTETDHEIQIR 111
Query: 125 EMYDKSVQLEVDLRGVEAMRSELLKVQADIKELTAVRQELT--------DLQQV----PA 172
+K ++E ++ E +R E+ + L R+EL DL++V +
Sbjct: 112 STLEKIAKMEGMVKNRENIRREVQSAHIEAHRLAREREELASKVKLGMKDLKKVCLEAES 171
Query: 173 LKA---EIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANS 229
L+A E+E +K+E QR R E +K G E + ME+K+I + +EKLR+EI+ +
Sbjct: 172 LEASSQELERLKEEHQRLRKEFEEEKSGNVEKLAQLKGMERKIIGAVKAIEKLRSEISTA 231
>UNIPROTKB|Q9Y592 [details] [associations]
symbol:CCDC41 "Coiled-coil domain-containing protein 41"
species:9606 "Homo sapiens" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AF155115
EMBL:AC073655 EMBL:BC053614 EMBL:BC125086 EMBL:BC125087
EMBL:AK056316 IPI:IPI00180681 IPI:IPI00796371 RefSeq:NP_057206.2
UniGene:Hs.279209 ProteinModelPortal:Q9Y592 MINT:MINT-1790539
STRING:Q9Y592 PhosphoSite:Q9Y592 DMDM:97045295 PaxDb:Q9Y592
PRIDE:Q9Y592 Ensembl:ENST00000397807 Ensembl:ENST00000547232
GeneID:51134 KEGG:hsa:51134 UCSC:uc001tdd.3 CTD:51134
GeneCards:GC12M094702 HGNC:HGNC:17966 HPA:HPA038161
neXtProt:NX_Q9Y592 PharmGKB:PA142672158 eggNOG:NOG125204
HOGENOM:HOG000111412 HOVERGEN:HBG053993 InParanoid:Q9Y592
OrthoDB:EOG418BMX ChiTaRS:CCDC41 GenomeRNAi:51134 NextBio:53977
ArrayExpress:Q9Y592 Bgee:Q9Y592 CleanEx:HS_CCDC41
Genevestigator:Q9Y592 GermOnline:ENSG00000173588 Uniprot:Q9Y592
Length = 693
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 41/169 (24%), Positives = 83/169 (49%)
Query: 65 IIEEHLAAQHQ--DIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQ 122
+I+E L +H + Q L A++ RL HV L+ EL+ E Q + ++ +
Sbjct: 27 LIDERLRCEHHKANYQTLKAEHTRLQNEHVKLQNELKHLFNEKQTQ---QEKLQLLLEEL 83
Query: 123 MREMYDKSVQLE-VDLRGVEAMRSELLKVQADIKELTAVRQELTDL-QQVPALKAEIENV 180
E+ +K+ LE + L+ + + ELL+ Q + T +R+ +L ++V +A +
Sbjct: 84 RGELVEKTKDLEEMKLQILTPQKLELLRAQIQQELETPMRERFRNLDEEVEKYRAVYNKL 143
Query: 181 KQELQRARAAIEFDKKGYAENYEHGQVM-EKKLISMARELEKLRAEIAN 228
+ E ++ E K+ YA + G++ E ++ + + E+LR ++ N
Sbjct: 144 RYEHTFLKSEFEHQKEEYARILDEGKIKYESEIARLEEDKEELRNQLLN 192
>RGD|1311992 [details] [associations]
symbol:Cgn "cingulin" species:10116 "Rattus norvegicus"
[GO:0005923 "tight junction" evidence=ISO] [GO:0043296 "apical
junction complex" evidence=ISO] RGD:1311992
GeneTree:ENSGT00630000089684 IPI:IPI00951558
Ensembl:ENSRNOT00000066035 UCSC:RGD:1311992 ArrayExpress:F1M434
Uniprot:F1M434
Length = 838
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 40/154 (25%), Positives = 79/154 (51%)
Query: 71 AAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKS 130
A Q D + A+ Q++++ L++ELE E H+ + F+ +K+ ++R +
Sbjct: 519 ATQAYDHAAVEAERQKMSSLVRELQKELEETSEETG---HWQNMFQKNKE-ELRAAKQEL 574
Query: 131 VQLEVDLRGVEAMRSELLKV-QADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARA 189
+QL ++ +E E +++ Q D+++ R D QQV LK E++ + EL+ +A
Sbjct: 575 LQLRMEKEEIEEELGEKMEILQRDLEQ---ARASTRDTQQVEELKKELQRTQGELKELQA 631
Query: 190 AIEFDKKGYAENYEHGQVMEKKLISMARELEKLR 223
E + A + + QV+EK+L + E ++ R
Sbjct: 632 --ERQSQEVAGRHRN-QVLEKQLSVLRAEADRSR 662
>UNIPROTKB|F1SNT8 [details] [associations]
symbol:DCTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031252 "cell leading edge" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0000922 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 OMA:HVYSRTP EMBL:CU468647 Ensembl:ENSSSCT00000009061
Uniprot:F1SNT8
Length = 1286
Score = 119 (46.9 bits), Expect = 0.00080, P = 0.00080
Identities = 57/204 (27%), Positives = 102/204 (50%)
Query: 35 PMPPHPALLEEMRETQFGMGPRPLPPTHPAIIEEHLAAQHQDIQGLLADNQRLAATHVAL 94
P+ P PAL T G P PLP P+ EE L AQ +D++ L + A A
Sbjct: 194 PIIPTPAL------TSPGAAP-PLPS--PSKEEEGLRAQVRDLEEKLETLRLKRAEDKAK 244
Query: 95 KQELEVAQYELQRMVHYADSFRMDK-DVQMR--EMYDKSVQ-LEVDLRGVEAMR--SELL 148
+ELE + +L+++ + + + D+Q R E ++ + LE R +E M ++ +
Sbjct: 245 LKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAI 304
Query: 149 KVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAIEFD-KKGYAENYEHGQV 207
++ KE+ R E Q+V ALK ++ + +L+ +A IE G A +Y+ Q
Sbjct: 305 EMATLDKEMAEERAESLQ-QEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQ- 362
Query: 208 MEKKLISMARELEKLRAEIANSEK 231
+E++ + L ++R ++++SEK
Sbjct: 363 LEEQNARLKDALVRMR-DLSSSEK 385
>ZFIN|ZDB-GENE-070112-2032 [details] [associations]
symbol:pbxip1b "pre-B-cell leukemia homeobox
interacting protein 1b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-070112-2032 GeneTree:ENSGT00530000063862
InterPro:IPR024889 PANTHER:PTHR15199 EMBL:CR854942 IPI:IPI00505095
Ensembl:ENSDART00000127570 ArrayExpress:E7F6R0 Bgee:E7F6R0
Uniprot:E7F6R0
Length = 852
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00082
Identities = 50/192 (26%), Positives = 88/192 (45%)
Query: 43 LEEMRETQFGMGPRPLPPTHPAIIEEHLA--AQHQDIQGLLADNQRLAATHVALKQELEV 100
LE+ R+T G+ P + H ++ LA AQ Q QG L Q LA T ++ E
Sbjct: 287 LEDSRDTPVGLQPPDILSKHTKDDQQILALQAQLQQYQGELKAAQLLAETGEKERERREE 346
Query: 101 AQYELQRMVHYADSF-RMDKDVQMRE--MYDKSVQLEVDLRGVEAMRSELLKVQADIKEL 157
+ E QR+ D + K+++ M ++S + + +L+ + +++SEL ++A + +L
Sbjct: 347 LEKEYQRIKEELDRLPALQKELEQENERMKEESARAQKELKALPSLQSELEHLRAQVSQL 406
Query: 158 T--AVRQELTDLQQVPAL--KAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLI 213
T A Q + P K ++ +++ R R +DKK + KK
Sbjct: 407 TVKAEHQHPIATSRTPPAGDKRDVPPIERPDIRNRKT--WDKKTEEKEQSKADKEWKKKK 464
Query: 214 SMARELEKLRAE 225
S +E +K R E
Sbjct: 465 SGKKEGDKDRKE 476
>UNIPROTKB|Q71YL3 [details] [associations]
symbol:smC "Chromosome partition protein Smc"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529
TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_014424.1
ProteinModelPortal:Q71YL3 STRING:Q71YL3 GeneID:2797604
KEGG:lmf:LMOf2365_1831 PATRIC:20324957 ProtClustDB:CLSK2518461
Uniprot:Q71YL3
Length = 1186
Score = 118 (46.6 bits), Expect = 0.00095, P = 0.00095
Identities = 38/174 (21%), Positives = 83/174 (47%)
Query: 65 IIEEHLAAQHQDIQGL--LADNQRLAATHVALKQELEVAQYE-LQRMVHYADSFRMDKDV 121
+ ++ +A + ++++ + +N RL + K + E E + + D + D
Sbjct: 702 LAKDSMAKKREELEETRGIGENLRLQEKELLGKLDRETENLERFNKQLQLYDIEKADGSE 761
Query: 122 QMREMYDKSVQL---EVDL-RGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEI 177
++ ++ ++ L +V++ + +EA E+ + + K L + R DL+ + +LKA+I
Sbjct: 762 ELNKLLERKETLLHEQVEIAKQIEATDEEIKAMTSSSKALESKRA--ADLESLSSLKAQI 819
Query: 178 ENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEK 231
+++LQ A A+E ENYE + E+KL S+ L + ++ K
Sbjct: 820 AAKREQLQSATEAVERVTTTLHENYEQKEAAEQKLASLKTNLTSVHTSEESARK 873
>UNIPROTKB|D4A4X4 [details] [associations]
symbol:Cgn "Protein Cgn" species:10116 "Rattus norvegicus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0016459 "myosin
complex" evidence=IEA] [GO:0043296 "apical junction complex"
evidence=IEA] InterPro:IPR002928 Pfam:PF01576 RGD:1311992
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00630000089684
GO:GO:0043296 OrthoDB:EOG4C87RN IPI:IPI00368670
Ensembl:ENSRNOT00000028440 ArrayExpress:D4A4X4 Uniprot:D4A4X4
Length = 1193
Score = 118 (46.6 bits), Expect = 0.00095, P = 0.00095
Identities = 39/150 (26%), Positives = 78/150 (52%)
Query: 75 QDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQLE 134
QD + A+ Q++++ L++ELE E H+ + F+ +K+ ++R + +QL
Sbjct: 528 QDHAAVEAERQKMSSLVRELQKELEETSEETG---HWQNMFQKNKE-ELRAAKQELLQLR 583
Query: 135 VDLRGVEAMRSELLKV-QADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAIEF 193
++ +E E +++ Q D+++ R D QQV LK E++ + EL+ +A E
Sbjct: 584 MEKEEIEEELGEKMEILQRDLEQ---ARASTRDTQQVEELKKELQRTQGELKELQA--ER 638
Query: 194 DKKGYAENYEHGQVMEKKLISMARELEKLR 223
+ A + + QV+EK+L + E ++ R
Sbjct: 639 QSQEVAGRHRN-QVLEKQLSVLRAEADRSR 667
>UNIPROTKB|D4A8U7 [details] [associations]
symbol:Dctn1 "Dynactin subunit 1" species:10116 "Rattus
norvegicus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] InterPro:IPR000938 Pfam:PF01302 RGD:62038
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 IPI:IPI00951875 Ensembl:ENSRNOT00000068102
ArrayExpress:D4A8U7 Uniprot:D4A8U7
Length = 1239
Score = 118 (46.6 bits), Expect = 0.00099, P = 0.00099
Identities = 58/205 (28%), Positives = 104/205 (50%)
Query: 35 PMPPHPALLEEMRETQFGMGPRPLPPTHPAIIEEHLAAQHQDIQGLLADNQRLAATHVAL 94
P+ P PAL T G P PLP P+ EE L AQ +D++ L + RL +
Sbjct: 157 PIIPTPAL------TSPGAAP-PLPS--PSKEEEGLRAQVRDLEEKL-ETLRLKRSEDKA 206
Query: 95 K-QELEVAQYELQRMVHYADSFRMDK-DVQMR--EMYDKSVQ-LEVDLRGVEAMR--SEL 147
K +ELE + +L+++ + + + D+Q R E ++ + LE R +E M ++
Sbjct: 207 KLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADA 266
Query: 148 LKVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAIEFD-KKGYAENYEHGQ 206
+++ KE+ R E Q+V ALK ++ + +L+ +A IE G A +Y+ Q
Sbjct: 267 IEMATLDKEMAEERAESLQ-QEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQ 325
Query: 207 VMEKKLISMARELEKLRAEIANSEK 231
+E++ + L ++R ++++SEK
Sbjct: 326 -LEEQNARLKDALVRMR-DLSSSEK 348
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.133 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 300 293 0.00091 115 3 11 23 0.44 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 563 (60 KB)
Total size of DFA: 185 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.53u 0.13s 36.66t Elapsed: 00:00:02
Total cpu time: 36.53u 0.13s 36.66t Elapsed: 00:00:02
Start: Tue May 21 00:46:06 2013 End: Tue May 21 00:46:08 2013