BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038916
(300 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8HYY4|UACA_BOVIN Uveal autoantigen with coiled-coil domains and ankyrin repeats
protein OS=Bos taurus GN=UACA PE=1 SV=1
Length = 1401
Score = 42.4 bits (98), Expect = 0.005, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 70 LAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDK 129
L QH ++ + + + L+ T LK+EL+ Q ++ R + +
Sbjct: 1092 LQKQHVPLEQVESLKKSLSGTIETLKEELKTKQRCYEKEQQTVTQLRQ----MLENQKNS 1147
Query: 130 SVQLEVDLRGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQR--A 187
SV L L+ EA E+ ++A ++E Q T ++V L++EI+N KQ L++
Sbjct: 1148 SVPLAEHLQVKEAFEKEVGIIKASLREKEEESQNKT--EEVSKLQSEIQNTKQALKKLET 1205
Query: 188 RAAIEFDKKGYAENYEHGQV--MEKKLISMARELEKLRAEIANSEKRARAA 236
R ++ K ++ Q+ + +KL ++ R+ E++ E+ +++K+ +A
Sbjct: 1206 REVVDLSKYKATKSDLETQISDLNEKLANLNRKYEEVCEEVLHAKKKELSA 1256
>sp|Q9WVQ0|PMFBP_MOUSE Polyamine-modulated factor 1-binding protein 1 OS=Mus musculus
GN=Pmfbp1 PE=2 SV=1
Length = 1022
Score = 41.6 bits (96), Expect = 0.007, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 96 QELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQLEVDLRGVEAMRSELLKVQADIK 155
Q+L+ E Q++ D DKD ++ E+ +Q++ LR EA EL K+Q K
Sbjct: 397 QDLQQQYTESQKLSLKKDKLLQDKDERLHELEKNLMQVQNSLREKEA---ELEKLQCTTK 453
Query: 156 ELTAVRQEL---TDLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKL 212
EL QE T AL+AEI+ +K L+ AR ++ + ++ E + L
Sbjct: 454 ELDTSLQEARQSTSKIDCEALRAEIQKLKDSLEEAREQLKVSDQNLTQSKEEAHLSASSL 513
Query: 213 ISMARELE 220
R++E
Sbjct: 514 EDAHRKIE 521
>sp|Q86XZ4|SPAS2_HUMAN Spermatogenesis-associated serine-rich protein 2 OS=Homo sapiens
GN=SPATS2 PE=1 SV=1
Length = 545
Score = 38.9 bits (89), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 20/154 (12%)
Query: 48 ETQFG-MGPRPLPPTHPAIIEEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQ 106
ETQF MG +P + ++ +D+Q LA V +K+E++ + +++
Sbjct: 215 ETQFSNMGMEDVPLATSKKLSSNIEKSVKDLQRCTVS---LARYRVVVKEEMDASIKKMK 271
Query: 107 RMVHYADSFRMDKDVQMREMYDK----------SVQLEVDLR------GVEAMRSELLKV 150
+ +S MD++V + DK S Q + +L V+ +L+++
Sbjct: 272 QAFAELESCLMDREVALLAEMDKVKAEAMEILLSRQKKAELLKKMTHVAVQMSEQQLVEL 331
Query: 151 QADIKELTAVRQELTDLQQVPALKAEIENVKQEL 184
+ADIK + R+ DL +V ++E +K+ +
Sbjct: 332 RADIKHFVSERKYDEDLGRVARFTCDVETLKKSI 365
>sp|P10716|CLC4F_RAT C-type lectin domain family 4 member F OS=Rattus norvegicus
GN=Clec4f PE=1 SV=1
Length = 550
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 29/204 (14%)
Query: 29 FGRGLGPMPPHPALLEEMRETQFGMGPRPLPPTHPAIIEEHLAAQHQDIQGLLADNQRLA 88
GRGL L ++ +G R ++ ++++A +IQ + QR
Sbjct: 217 LGRGLEEAQSEIQALRGSLQSSNDLGSRTQNFLQHSM--DNISA---EIQAMRDGMQRAG 271
Query: 89 ATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQ-LEVDLRGVEAMRSEL 147
+LK++LE ++Q + E D +Q L+ L+ ++ S++
Sbjct: 272 EEMTSLKKDLETLTAQIQNANGHL------------EQTDTQIQGLKAQLKSTSSLNSQI 319
Query: 148 LKVQADIK----ELTAVRQELTDLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYE 203
V +K EL +R++L+D V ALK+ ++ ++ LQ+A+A ++ K G E
Sbjct: 320 EVVNGKLKDSSRELQTLRRDLSD---VSALKSNVQMLQSNLQKAKAEVQSLKTG----LE 372
Query: 204 HGQVMEKKLISMARELEKLRAEIA 227
+ + K+ +LE L+ +A
Sbjct: 373 ATKTLAAKIQGQQSDLEALQKAVA 396
>sp|Q1L8T5|CING_DANRE Cingulin OS=Danio rerio GN=cgn PE=2 SV=1
Length = 1161
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 30/160 (18%)
Query: 91 HVALKQELEVAQYELQRMVHYADSFRMDKD---VQMREMYDKSVQLEVDLRGV------- 140
+ L+Q+L+ ++ ELQ RMD++ ++R+ D+ QL+ +LR
Sbjct: 426 NTQLQQQLDKSRRELQENQDQMVELRMDREGAESRLRQQEDQLAQLQEELRRTLENSPQS 485
Query: 141 EAMRSELLKVQADIKELTAVRQELTD-LQQVP--------ALKAEI-----------ENV 180
++M+ +LL VQA++ E +RQ+L D L+Q ALK E+ E
Sbjct: 486 DSMQLDLLTVQAELSESQLLRQKLEDTLRQRERELTALKGALKDEVASHDKEMEALREQF 545
Query: 181 KQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELE 220
Q++ R ++E + E E Q + +++M ELE
Sbjct: 546 SQDMDALRHSMETVSQSQLEIEEERQKVNASILAMEEELE 585
>sp|Q59037|SMC_METJA Chromosome partition protein Smc OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=smc PE=3 SV=2
Length = 1169
Score = 38.1 bits (87), Expect = 0.086, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 88 AATHVALKQELEVAQYEL-QRMVHYADSF--RMDKDVQ-----MREMYDKSVQLEVDLRG 139
A ++ L +EL+ A+Y L + V Y + + D++ E K +++V++
Sbjct: 216 AEKYIKLNEELKAAKYALILKKVSYLNVLLENIQNDIKNLEELKNEFLSKVREIDVEIEN 275
Query: 140 V------------EAMRSELLKVQADIKELTAVRQEL-----TDLQQVPALKAEIENVKQ 182
+ E E+L++ IKEL + + + ++ ++ EIEN K+
Sbjct: 276 LKLRLNNIINELNEKGNEEVLELHKSIKELEVEIENDKKVLDSSINELKKVEVEIENKKK 335
Query: 183 ELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSE 230
E++ + I ++ E + + +E+K+ ++ E E+L+ IA SE
Sbjct: 336 EIKETQKKIIENRDSIIEKEQQIKEIEEKIKNLNYEKERLKEAIAESE 383
>sp|Q58718|RAD50_METJA DNA double-strand break repair Rad50 ATPase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=rad50 PE=1 SV=1
Length = 1005
Score = 36.6 bits (83), Expect = 0.20, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 15/140 (10%)
Query: 96 QELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQLEVDLRGVEAMRSELLKVQADIK 155
QEL++ +Y+L +V ++ KD Y+K L ++R +E+ EL D
Sbjct: 260 QELKILEYDLNTVVEARETLNRHKD-----EYEKYKSLVDEIRKIESRLRELKSHYEDYL 314
Query: 156 ELTAVRQELTDLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLIS- 214
+LT +Q+ +K +IE +K+ + +++ + D N ++ + I
Sbjct: 315 KLT---------KQLEIIKGDIEKLKEFINKSKYRDDIDNLDTLLNKIKDEIERVETIKD 365
Query: 215 MARELEKLRAEIANSEKRAR 234
+ EL+ L EI EK R
Sbjct: 366 LLEELKNLNEEIEKIEKYKR 385
Score = 33.1 bits (74), Expect = 2.5, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 123 MREMYDKSVQLEVDLRGVEAMRSELLKVQADIKELTAVRQELTDLQ-QVPALKAEI-ENV 180
++E+ +K LE + + +L ++ ++IK L + EL +++ + P K I EN
Sbjct: 454 LKEIEEKKKVLENLQKEKIELNKKLGEINSEIKRLKKILDELKEVEGKCPLCKTPIDENK 513
Query: 181 KQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSE 230
K EL I K Y + + KK+ + +++EKL+ EI E
Sbjct: 514 KMEL------INQHKTQLNNKYTELEEINKKIREIEKDIEKLKKEIDKEE 557
>sp|Q5T9S5|CCD18_HUMAN Coiled-coil domain-containing protein 18 OS=Homo sapiens GN=CCDC18
PE=2 SV=1
Length = 1454
Score = 36.2 bits (82), Expect = 0.31, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 95 KQELEV---AQYELQRMVHYADSFRMDKDVQMREMYDKSVQ-----LEVDLRGVEAMRSE 146
K ELE A EL+++ H ++ + + +Q RE+ + +Q L+ LR ++ +R
Sbjct: 912 KTELEKKTNAVKELEKLQHSTET-ELTEALQKREVLETELQNAHGELKSTLRQLQELRDV 970
Query: 147 LLKVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAI-----EFDKKGYAEN 201
L K Q ++E ++LT ++ K EIE+ KQEL A+ E ++
Sbjct: 971 LQKAQLSLEEKYTTIKDLT--AELRECKMEIEDKKQELLEMDQALKERNWELKQRAAQVT 1028
Query: 202 Y------EHGQVMEKKLISMARELEKLRAEIANSEKR 232
+ EH ME+K+I + LEK E+ K+
Sbjct: 1029 HLDMTIREHRGEMEQKIIKLEGTLEKSELELKECNKQ 1065
Score = 31.6 bits (70), Expect = 6.9, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 92 VALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQLEVDLRGVEAMRSELLKVQ 151
+ L+ LE ++ EL+ +S ++ +K + + + + ++ E+ + Q
Sbjct: 1046 IKLEGTLEKSELELKECNKQIESLNDKLQNAKEQLREKEFIMLQNEQEISQLKKEIERTQ 1105
Query: 152 ADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKK 211
+KE+ +V +E Q + E ++ QEL+ R ++ AE H QV +
Sbjct: 1106 QRMKEMESVMKEQE--QYIATQYKEAIDLGQELRLTREQVQNSHTELAEA-RHQQVQAQ- 1161
Query: 212 LISMARELEKLRAEIANSEKRARAAAAVGN 241
RE+E+L +E+ + ++ ++ A GN
Sbjct: 1162 -----REIERLSSELEDMKQLSKEKDAHGN 1186
>sp|Q6RT24|CENPE_MOUSE Centromere-associated protein E OS=Mus musculus GN=Cenpe PE=1 SV=1
Length = 2474
Score = 36.2 bits (82), Expect = 0.34, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 94 LKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQLEVDLRGVEAMRSELLKVQAD 153
LKQE+ E + + DS + + + +E+ K+V+ + L +EA+R EL +
Sbjct: 843 LKQEIGALSKEAESLAFSLDSVKAELSHKTQELEQKTVEGQERLNKMEALREELESRDSS 902
Query: 154 IKELTAVRQELTD-----LQQVPALKAEIENVKQ---ELQRARAAIEFD 194
++ + + LT+ L++V AL E +N+KQ LQ R + D
Sbjct: 903 LQSVEKEKVLLTEKLQQALKEVKALTQEKKNLKQLQESLQTERDQLRSD 951
>sp|P25386|USO1_YEAST Intracellular protein transport protein USO1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=USO1 PE=1 SV=2
Length = 1790
Score = 35.4 bits (80), Expect = 0.47, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 17/102 (16%)
Query: 134 EVDLRGVEAMRSELL----KVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARA 189
E D++ ++ +S+L+ + + DI+EL + L+ +E+E VKQEL A+
Sbjct: 1543 EEDIKNLQHEKSDLISRINESEKDIEELK------SKLRIEAKSGSELETVKQELNNAQE 1596
Query: 190 AIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEK 231
I N E V++ KL + REL+ +AEI ++++
Sbjct: 1597 KIRI-------NAEENTVLKSKLEDIERELKDKQAEIKSNQE 1631
Score = 34.3 bits (77), Expect = 1.0, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 66 IEEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMRE 125
IE+++ + I L + + + + K E E L+ + A + + ++ E
Sbjct: 1020 IEKNIEQLKKTISDLEQTKEEIISKSDSSKDEYESQISLLKEKLETATTANDENVNKISE 1079
Query: 126 MYDKSVQLEVDLRGVEAMRSEL-LKVQADIKELTAVRQELTDLQQVP-ALKAEIENVKQE 183
+ +LE +L + +++EL K++ K L V++ L++ L+ E KQ+
Sbjct: 1080 LTKTREELEAELAAYKNLKNELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQ 1139
Query: 184 LQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEKR 232
L RA +E +EK+ +A +L+K +IAN E++
Sbjct: 1140 LNSLRANLE--------------SLEKEHEDLAAQLKKYEEQIANKERQ 1174
Score = 32.0 bits (71), Expect = 5.3, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 154 IKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQ----VME 209
I ELT R+EL A A +N+K EL+ E K EN EH + +E
Sbjct: 1077 ISELTKTREELE------AELAAYKNLKNELETKLETSEKALKEVKENEEHLKEEKIQLE 1130
Query: 210 KKLISMARELEKLRAEIANSEKRARAAAA 238
K+ ++L LRA + + EK AA
Sbjct: 1131 KEATETKQQLNSLRANLESLEKEHEDLAA 1159
>sp|Q8RHQ8|CLPB_FUSNN Chaperone protein ClpB OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=clpB PE=3 SV=2
Length = 857
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 16/105 (15%)
Query: 122 QMREMYDKSVQLEVDLRGVE-----AMRSELLKVQADIKELTAVRQELT--------DLQ 168
++ ++ K++QLE++++ +E A + L ++ ++ EL ++ LT D+
Sbjct: 409 ELDQLTRKALQLEIEIKALEKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDIS 468
Query: 169 QVPALKAEIENVKQELQRARAAIEFDKKGYAE-NYEHGQVMEKKL 212
++ +K EIENVK E+++A E+D +E Y +EK+L
Sbjct: 469 KIKNIKREIENVKLEMEKAER--EYDLTKLSELKYGKLATLEKEL 511
>sp|Q0WVX5|SSY4_ARATH Probable starch synthase 4, chloroplastic/amyloplastic
OS=Arabidopsis thaliana GN=SS4 PE=2 SV=1
Length = 1040
Score = 35.0 bits (79), Expect = 0.74, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 34/164 (20%)
Query: 92 VALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQLEVDLRGVEA----MRSEL 147
+AL +ELE + E + + + + + D +++ ++ V LE + G+E+ + S+L
Sbjct: 276 LALSKELETLKLENLSLRNDIEMLKSELD-SVKDTGERVVVLEKECSGLESSVKDLESKL 334
Query: 148 LKVQADIKELTAVRQELTDL-------------------------QQVPALKAEIENVKQ 182
Q D+ +L+ ++ E TDL QQ L+ +++ +++
Sbjct: 335 SVSQEDVSQLSTLKIECTDLWAKVETLQLLLDRATKQAEQAVIVLQQNQDLRNKVDKIEE 394
Query: 183 ELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEI 226
L+ A E +K ++ ++M+ K+ + LEK AEI
Sbjct: 395 SLKEANVYKESSEK----IQQYNELMQHKVTLLEERLEKSDAEI 434
>sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3
Length = 2116
Score = 34.3 bits (77), Expect = 1.1, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 61/118 (51%), Gaps = 12/118 (10%)
Query: 122 QMREMYDKSVQLEVDLRGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEIE--- 178
+ + +YD V+ E D+ EA+R+++ ++Q+ I +L ++ L +V L+ E+E
Sbjct: 1137 EKKSLYDLKVKQESDM---EALRNQISELQSTIAKLEKIKSTLEG--EVARLQGELEAEQ 1191
Query: 179 ----NVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEKR 232
NV+++ ++ +E AE Q ++K + +EL +++ +++ + +
Sbjct: 1192 LAKSNVEKQKKKVELDLEDKSAQLAEETAAKQALDKLKKKLEQELSEVQTQLSEANNK 1249
>sp|P35580|MYH10_HUMAN Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3
Length = 1976
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 64/121 (52%), Gaps = 19/121 (15%)
Query: 132 QLEVDLRGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAI 191
++E+DL+ +EA I+ R E+ ++Q+ L+A++++ ++EL+ ARA+
Sbjct: 1621 KMEIDLKDLEAQ----------IEAANKARDEV--IKQLRKLQAQMKDYQRELEEARASR 1668
Query: 192 EFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEKRARAAAAVGNPGASFNTNYG 251
+ E + + EKKL S+ E+ +L+ E+A+SE+ R A + A TN
Sbjct: 1669 D-------EIFAQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEITNSA 1721
Query: 252 T 252
+
Sbjct: 1722 S 1722
>sp|Q5SNZ0|GRDN_MOUSE Girdin OS=Mus musculus GN=Ccdc88a PE=1 SV=2
Length = 1873
Score = 33.5 bits (75), Expect = 1.7, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 77 IQGLLADNQRLAATHVALKQELE--------VAQYELQRMVHYADSFRMDKDVQ-MREMY 127
++ L +N +L ++ L++ +E +AQ +L+ ++ ++ K ++ MR +
Sbjct: 689 LESLEKENSQLDEENLELRRSVESLKCASMRMAQLQLENKELESEKEQLRKGLELMRASF 748
Query: 128 DKSVQLEVDLRGVEAMRSELLK-VQADIKELTAVRQELTDLQQVPALKAEIENVKQELQR 186
K+ +LEV +G++ L K ++ K++ + EL DL E+EN Q LQ+
Sbjct: 749 KKTERLEVSYQGLDTENQRLQKALENSNKKIQQLESELQDL--------EMEN--QTLQK 798
Query: 187 ARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEKRARAAAAV 239
+ ++ K + + + +E++ +LEK + ++ KR R A +
Sbjct: 799 SLEELKISSKRLEQLEKENKSLEQE----TSQLEKDKKQLEKENKRLRQQAEI 847
>sp|Q6GPK9|TAOK2_XENLA Serine/threonine-protein kinase TAO2 OS=Xenopus laevis GN=taok2
PE=2 SV=1
Length = 1025
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 41/203 (20%)
Query: 119 KDVQMR------EMYDKSVQLEVDLRGV------EAMRSEL-LKVQADIKELTAVRQEL- 164
KD Q R E YD S+ + + + EA EL +++Q +++ L A + ++
Sbjct: 760 KDEQTRKLAILAEQYDHSINEMLSTQALRLDETQEAEYQELRIQLQKELELLNAYQSKIK 819
Query: 165 --TDLQQVPALKAEIENVKQELQRARAAIE--FDKKGYAENYEHGQVMEKKLISMARELE 220
TD Q + E++ ++Q + RA +E +++ A E + + L ARE+E
Sbjct: 820 IHTDAQH----ERELKELEQRVSIRRALLEQRIEEEMLALQTERSERIRSLLERQAREIE 875
Query: 221 KLRAE-----IANSEKRARAAAAVGNPGASFNTNYGTPEAGYPSNPYPVS---YSMNPVQ 272
+E +N A G P +FN Y P G+PS P P S +S
Sbjct: 876 AFDSESMRLGFSN-------MALTGIPAEAFNQGYQAPPPGWPSRPVPRSGSHWSHGVQN 928
Query: 273 AGAETYPH----YGPGPGSWGAY 291
GA P SWG +
Sbjct: 929 TGAPQLWRQPTLLAPPSASWGLH 951
>sp|Q61879|MYH10_MOUSE Myosin-10 OS=Mus musculus GN=Myh10 PE=1 SV=2
Length = 1976
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 19/105 (18%)
Query: 132 QLEVDLRGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAI 191
++E+DL+ +EA I+ R E+ ++Q+ L+A++++ ++EL+ ARA+
Sbjct: 1621 KMEIDLKDLEAQ----------IEAANKARDEV--IKQLRKLQAQMKDYQRELEEARASR 1668
Query: 192 EFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEKRARAA 236
+ E + + EKKL S+ E+ +L+ E+A+SE+ R A
Sbjct: 1669 D-------EIFAQSKESEKKLKSLEAEILQLQEELASSERARRHA 1706
>sp|Q9JLT0|MYH10_RAT Myosin-10 OS=Rattus norvegicus GN=Myh10 PE=1 SV=1
Length = 1976
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 19/105 (18%)
Query: 132 QLEVDLRGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAI 191
++E+DL+ +EA I+ R E+ ++Q+ L+A++++ ++EL+ ARA+
Sbjct: 1621 KMEIDLKDLEAQ----------IEAANKARDEV--IKQLRKLQAQMKDYQRELEEARASR 1668
Query: 192 EFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEKRARAA 236
+ E + + EKKL S+ E+ +L+ E+A+SE+ R A
Sbjct: 1669 D-------EIFAQSKESEKKLKSLEAEILQLQEELASSERARRHA 1706
>sp|P16946|MX_STRP9 Virulence factor-related M protein OS=Streptococcus pyogenes
serotype M49 GN=ennX PE=3 SV=1
Length = 369
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 95/238 (39%), Gaps = 58/238 (24%)
Query: 55 PRPLPPTHPAIIEEHLAAQHQDIQG----LLADNQRLAATHVALKQELEV---AQYELQR 107
R L + A E L A+HQ ++ L NQ A+ L +LE A+ EL+
Sbjct: 137 SRDLEASRAAKKE--LEAKHQKLEAENKKLTEANQVSEASRKGLSNDLEASRAAKKELE- 193
Query: 108 MVHYADSFRMDKDVQMREMYDKSVQLEVDL------------RGVEAMRSELLKVQADIK 155
A +++ D Q E K +LE DL R +EA R KV +
Sbjct: 194 ----AKYQKLETDHQALEA--KHQKLEADLPKFQRPSRKGLSRDLEASREANKKVTS--- 244
Query: 156 ELTAVRQELTDLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISM 215
ELT + +L+ L++ L E K ELQ + D +G A ++++L
Sbjct: 245 ELTQAKAQLSALEESKKL---SEKEKAELQ-----AKLDAQGKA--------LKEQLAKQ 288
Query: 216 ARELEKLRAEIA-----------NSEKRARAAAAVGNPGASFNTNYGTPEAGYPSNPY 262
EL KLRAE A N E+ RAA P + P G +NP+
Sbjct: 289 TEELAKLRAEKAAGSKTPATKPANKERSGRAAQTATRPSQNKGMRSQLPSTGEAANPF 346
>sp|P50469|M22_STRPY M protein, serotype 2.2 OS=Streptococcus pyogenes GN=emmL2.2 PE=3
SV=1
Length = 372
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 92/235 (39%), Gaps = 53/235 (22%)
Query: 55 PRPLPPTHPAIIEEHLAAQHQDIQG----LLADNQRLAATHVALKQELEV---------A 101
R L + A E L A+HQ ++ L NQ A+ L +LE A
Sbjct: 141 SRDLEASRTAKKE--LEAKHQKLEAENKKLTEGNQVSEASRKGLSNDLEASRAAKKELEA 198
Query: 102 QYELQRMVHYA---DSFRMDKDVQMREMYDKSVQLEVDLRGVEAMRSELLKVQADIKELT 158
+Y+ H A +++ D Q+ E K + R +EA R KV + ELT
Sbjct: 199 KYQKLETDHQALEAKHQKLEADYQVSETSRKGLS-----RDLEASREANKKVTS---ELT 250
Query: 159 AVRQELTDLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARE 218
+ +L+ L++ L E K ELQ + D +G A ++++L E
Sbjct: 251 QAKAQLSALEESKKL---SEKEKAELQ-----AKLDAQGKA--------LKEQLAKQTEE 294
Query: 219 LEKLRAEIA-----------NSEKRARAAAAVGNPGASFNTNYGTPEAGYPSNPY 262
L KLRAE A N E+ RAA P + P G +NP+
Sbjct: 295 LAKLRAEKAAGSKTPATKPANKERSGRAAQTATRPSQNKGMRSQLPSTGEAANPF 349
>sp|P15924|DESP_HUMAN Desmoplakin OS=Homo sapiens GN=DSP PE=1 SV=3
Length = 2871
Score = 33.5 bits (75), Expect = 2.2, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 76 DIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQLEV 135
++QGL+ D QR L+QE+E + Q+ A + + Q ++ + L V
Sbjct: 1765 ELQGLINDLQR---ERENLRQEIE----KFQKQALEASNRIQESKNQCTQVVQERESLLV 1817
Query: 136 DLRGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAIEFDK 195
++ +E ++ L +++ ++ + + T ++Q L+ E + ++ +L + + +
Sbjct: 1818 KIKVLEQDKARLQRLEDELNRAKSTLEAETRVKQ--RLECEKQQIQNDLNQWKTQYSRKE 1875
Query: 196 KGYAENYEHGQVMEKKLISMARELEKLRAEIANSEKRAR 234
+ + + E++ S+ E+E+L+AEI E+R R
Sbjct: 1876 EAIRKIESEREKSEREKNSLRSEIERLQAEIKRIEERCR 1914
Score = 32.3 bits (72), Expect = 4.0, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 37/180 (20%)
Query: 67 EEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMR-- 124
EE + I L +N+ L+ LK L L+R+ ++D+Q +
Sbjct: 1385 EEDTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRV---------EEDIQQQKA 1435
Query: 125 ---EMYDKSVQLEVDLRGVEAMRSE------------LLKVQADIKELTAVRQ----ELT 165
E+ + QLEV+LR V MR+E +Q KE+ ++Q E
Sbjct: 1436 TGSEVSQRKQQLEVELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLKQLIDKETN 1495
Query: 166 DLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAE 225
D + + A ++ V+ +LQ+A ++ E +V E++L + + E++ E
Sbjct: 1496 DRKCLEDENARLQRVQYDLQKANSSA-------TETINKLKVQEQELTRLRIDYERVSQE 1548
>sp|P49454|CENPF_HUMAN Centromere protein F OS=Homo sapiens GN=CENPF PE=1 SV=2
Length = 3210
Score = 33.1 bits (74), Expect = 2.2, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 22/179 (12%)
Query: 67 EEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREM 126
+E+L Q Q+ QG L++ +L ++ +L +E E A+ +++ A ++ ++ E
Sbjct: 2308 KENLTKQIQEKQGQLSELDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLKELNEA 2367
Query: 127 -----------------YDKSVQLEVDLR-GVEAMRSELLKVQADIKELTAVRQELTDLQ 168
D ++ E LR +E +R+ L +AD K+ V Q+L + +
Sbjct: 2368 VAALCGDQEIMKATEQSLDPPIEEEHQLRNSIEKLRARL---EADEKKQLCVLQQLKESE 2424
Query: 169 Q-VPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEI 226
LK +EN+++EL+ AR E + + ++ K+ M + L L ++
Sbjct: 2425 HHADLLKGRVENLERELEIARTNQEHAALEAENSKGEVETLKAKIEGMTQSLRGLELDV 2483
>sp|Q27991|MYH10_BOVIN Myosin-10 OS=Bos taurus GN=MYH10 PE=2 SV=2
Length = 1976
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 19/105 (18%)
Query: 132 QLEVDLRGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAI 191
++E+DL+ +EA I+ R E+ ++Q+ L+A++++ ++EL+ ARA+
Sbjct: 1621 KMEIDLKDLEAQ----------IEAANKARDEV--IKQLRKLQAQMKDYQRELEEARASR 1668
Query: 192 EFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEKRARAA 236
+ E + + EKKL S+ E+ +L+ E+A+SE+ R A
Sbjct: 1669 D-------EIFAQSKESEKKLKSLEAEILQLQEELASSERARRHA 1706
>sp|Q03410|SYCP1_RAT Synaptonemal complex protein 1 OS=Rattus norvegicus GN=Sycp1 PE=2
SV=2
Length = 997
Score = 33.1 bits (74), Expect = 2.3, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 94 LKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQLEVDLRGVEAMRSELLKVQAD 153
L ELE + +QR + + D + + +Y + + E + + ++ V +
Sbjct: 321 LTSELEDIKMSMQRSMSTQKTLEEDLQIATKTIYQLTEEKEAQMEELNKAKTTHSLVVTE 380
Query: 154 IKELTAVRQEL--TDLQQVPALKAEIENVKQELQRARAAIE----FDKKGYAENYEHGQV 207
+K T +EL T+ Q++ + +++ + ELQ+ + +E F E E +
Sbjct: 381 LKATTCTLEELLRTEQQRLENNEDQLKLITMELQKKSSELEEMTKFKNNKEVELEELKTI 440
Query: 208 M--EKKLISMARELEKLRAEIANSEK 231
+ ++KL+ +++EKL E+ E+
Sbjct: 441 LAEDQKLLDEKKQVEKLAEELQGKEQ 466
Score = 33.1 bits (74), Expect = 2.5, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 16/158 (10%)
Query: 75 QDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQLE 134
++++ +LA++Q+L +++ E Q + Q + + + +E++D VQ+
Sbjct: 435 EELKTILAEDQKLLDEKKQVEKLAEELQGKEQELTFLLQT-------REKEIHDLEVQVT 487
Query: 135 VD-------LRGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQRA 187
V L+ VE M++EL K + ELTA L L + L E ++ EL++
Sbjct: 488 VTKTSEEHYLKQVEEMKTELEKEKLKNIELTANSDML--LLENKKLVQEASDMVLELKKH 545
Query: 188 RAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAE 225
+ I KK + + +E+K +++ ELE +R E
Sbjct: 546 QEDIINCKKQEERMLKQIETLEEKEMNLRDELESVRKE 583
>sp|C5DY19|SP110_ZYGRC Spindle pole body component 110 OS=Zygosaccharomyces rouxii (strain
ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229)
GN=SPC110 PE=3 SV=1
Length = 835
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 28/188 (14%)
Query: 73 QHQ-DIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSV 131
QHQ +IQ L +D L + V + ELE + ++QR+++ Q+ E K
Sbjct: 262 QHQLEIQMLRSDVNNLNVSLVNKESELEEDRAKIQRLMN-----------QLHEFDHKGS 310
Query: 132 QLEVDL-RGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEIEN--VKQELQRAR 188
Q +DL R +E R + ++ +++ LT R L + EIEN ++ EL+R R
Sbjct: 311 QSLLDLERQLEMKRDSISSLEKEVRALTHDRVHL----ETRIKDREIENAKIQSELERLR 366
Query: 189 AAIEFDKKGYAENYEHGQV------MEKKLISMARELEKLRAEIANSEKRARAAAAVGNP 242
+ K + N+E G++ ++ K+ ++ E L I+ K +
Sbjct: 367 DNV---KNNNSSNFEIGELKHAKASLDDKVRNLTEERHNLNQRISALRKECDEWKSKYQR 423
Query: 243 GASFNTNY 250
S ++N+
Sbjct: 424 NESLDSNH 431
>sp|Q9HK21|SMC_THEAC Chromosome partition protein Smc OS=Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=smc PE=3 SV=1
Length = 1140
Score = 33.1 bits (74), Expect = 2.4, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 22/201 (10%)
Query: 67 EEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREM 126
E +AA+ D+ G + + A + +LE L V AD Q+REM
Sbjct: 822 ENSIAAEIDDLNGKKRELEEKAKKYQYALNDLEGRYGNLSAQVREADK-------QIREM 874
Query: 127 YD--KSVQLEVDLRGVEAMRSELLKVQADIKE--LTAVRQELTDLQQVPALKAEIENVKQ 182
+ + +DL+ + M LKV+A I E L+++ +EL+ A+ +++ ++Q
Sbjct: 875 ENGINDAKASIDLKN-DLMND--LKVKAGILEGNLSSIERELSSYSGCEAVIGDLQAMRQ 931
Query: 183 ELQRARAAIEFDKKGYAENYEHG-------QVMEKKLISMARELEKLRAEIANSEKRARA 235
E++RA + + YE + +KL+ + LE+ A + N +KR
Sbjct: 932 EIERAIMDLGEINNAAPQQYEDALKDLDDYEKKHEKLMEEKKALEETTA-MLNEKKREVF 990
Query: 236 AAAVGNPGASFNTNYGTPEAG 256
+ N YG G
Sbjct: 991 VKTFTDISEKMNYVYGIINGG 1011
>sp|E9Q557|DESP_MOUSE Desmoplakin OS=Mus musculus GN=Dsp PE=3 SV=1
Length = 2883
Score = 32.7 bits (73), Expect = 2.9, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 76 DIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREMYDKSVQLEV 135
++QGL+ D QR L+QE+E + Q+ A + + Q ++ + L V
Sbjct: 1777 ELQGLINDLQR---ERENLRQEIE----KFQKQALEASNRIQESKSQCTQVVQERESLLV 1829
Query: 136 DLRGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEIENVKQELQRARAAIEFDK 195
++ +E ++ L +++ ++ A + + ++Q L+ E + ++ +L + + +
Sbjct: 1830 KIKVLEQDKARLQRLEDELNRAKATLEAESRVKQ--RLECEKQQIQNDLNQWKTQYSRKE 1887
Query: 196 KGYAENYEHGQVMEKKLISMARELEKLRAEIANSEKRAR 234
+ + + E++ S+ E+E+L+AEI E+R R
Sbjct: 1888 ETIRKIESEREKSEREKNSLRSEIERLQAEIKRIEERCR 1926
Score = 32.0 bits (71), Expect = 5.2, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 19/171 (11%)
Query: 67 EEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREM 126
EE + I L +N+ L LK L L+R+ A + EM
Sbjct: 1397 EEDTSGYRAQIDNLTRENRSLCEEVKRLKNTLAQTTENLRRVEENAQQ----QKATGSEM 1452
Query: 127 YDKSVQLEVDLRGVEAMRSE------------LLKVQADIKELTAVRQELTDLQQVPALK 174
+ QLE++LR V MR+E +Q KE+ ++Q L D +
Sbjct: 1453 SQRKQQLEIELRQVTQMRTEESMRYKQSLDDAAKTIQDKNKEIERLKQ-LVDKETNERKC 1511
Query: 175 AEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAE 225
E EN K LQR + ++ E +V E++L + + E++ E
Sbjct: 1512 LEDENSK--LQRVQYDLQKANNSATEAMSKLKVQEQELTRLRIDYERVSQE 1560
>sp|Q8TZY2|SMC_PYRFU Chromosome partition protein Smc OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=smc PE=1 SV=2
Length = 1177
Score = 32.7 bits (73), Expect = 3.0, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 75/150 (50%), Gaps = 20/150 (13%)
Query: 99 EVAQYELQRMVHYADSFRMDKDV-QMREMYDKSVQLEVDLRGVEAMRSELLKVQADIKEL 157
E+ + E +R V +DK RE +D V + +E ++ +++ +I+ L
Sbjct: 362 EIKKKEEERNVLVVKLGEIDKTFGAAREEFDSVV------KELEETTRKMYEIEGNIRRL 415
Query: 158 TAVRQELTDLQQVPALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQV---------M 208
+++L ++ L+A++ +K+++ +A +E DK+ E G++ +
Sbjct: 416 QEEKEKLH--SRILFLRAKLPGIKEKINEFKAVVE-DKRAEISEIE-GKLSTIQAKRIKV 471
Query: 209 EKKLISMARELEKLRAEIANSEKRARAAAA 238
EK++ + + ELEK+ E+ +SE+ AA A
Sbjct: 472 EKEIEAKSNELEKVSKELESSERELIAAEA 501
Score = 32.3 bits (72), Expect = 4.4, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 28/128 (21%)
Query: 133 LEVDLRGVEAMRSEL-LKVQADIKELTAVRQELTDL-QQVPALKAEIENVKQELQRARAA 190
L+++LR +E EL +K+ + KEL ++L L ++ A+K EIE ++++Q
Sbjct: 687 LKIELRSLENASFELRIKLSDEKKELELASKDLNRLLEEENAVKEEIEESERKIQEIEQK 746
Query: 191 IEFDKKGYA--------------------ENYEHGQVMEK------KLISMARELEKLRA 224
IE +K A EN E ++MEK ++ S+ EL ++ +
Sbjct: 747 IENEKSELAKLRGRIQRLERKKEKLKKALENPEARELMEKIRIIDGEISSLKEELSRIES 806
Query: 225 EIANSEKR 232
I + E R
Sbjct: 807 RIESLESR 814
>sp|Q02455|MLP1_YEAST Protein MLP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MLP1 PE=1 SV=2
Length = 1875
Score = 32.7 bits (73), Expect = 3.5, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 94 LKQELEVAQYELQRMVHYADSFRMDKD------VQMREMYDKSVQL----EVDLRGVEAM 143
L+Q++ + ELQ D+ R++K+ Q ++ +K QL E ++ +
Sbjct: 1171 LRQKISLMDVELQDARTKLDNSRVEKENHSSIIQQHDDIMEKLNQLNLLRESNITLRNEL 1230
Query: 144 RSELLKVQADIKELTAVRQELTDLQ-QVPALKAEIENVKQELQRARAAIEFDKKGYAENY 202
+ K + EL ++Q + ++ ++ ALK ++ +QEL+ A+ + KK +
Sbjct: 1231 ENNNNKKKELQSELDKLKQNVAPIESELTALKYSMQEKEQELKLAKEEVHRWKKRSQDIL 1290
Query: 203 E-HGQVMEKKLISMARELEKLRAEIANSEKRARAA 236
E H Q+ + E+E L+ E+ N E++ A
Sbjct: 1291 EKHEQLSSSDYEKLESEIENLKEELENKERQGAEA 1325
>sp|Q8TBY8|PMFBP_HUMAN Polyamine-modulated factor 1-binding protein 1 OS=Homo sapiens
GN=PMFBP1 PE=2 SV=1
Length = 1022
Score = 32.3 bits (72), Expect = 3.9, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 69 HLAAQHQDIQ-GLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMDKDVQMREMY 127
HL + +Q GLL D Q+ A T L++EL++ Q E S R + +
Sbjct: 504 HLEDTQRKLQKGLLLDKQK-ADTIQELQRELQMLQKESSMAEKEQTSNR-------KRVE 555
Query: 128 DKSVQLEVDLRGVEAMRSELLKVQADIKELTAVRQELTDL-----QQVPALKAEIENVKQ 182
+ S++L LR +E E ++Q + E ++ D ++ ++K ++E +
Sbjct: 556 ELSLELSEALRKLENSDKEKRQLQKTVAEQDMKMNDMLDRIKHQHREQGSIKCKLE---E 612
Query: 183 ELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEK 221
+LQ A +E ++ ++ EH ++ME +L ++ +E +K
Sbjct: 613 DLQEATKLLEDKREQLKKSKEHEKLMEGELEALRQEFKK 651
>sp|Q6P132|TXB1B_DANRE Tax1-binding protein 1 homolog B OS=Danio rerio GN=tax1bp1b PE=2
SV=3
Length = 823
Score = 32.0 bits (71), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 64 AIIEEHLAAQHQDIQGLLADNQRLAATHVALKQELEVAQYELQRMVHYADSFRMD----- 118
A ++ LA + + + LLA N + AL+++L + +LQ A+ + +
Sbjct: 329 ARVKSCLAEKEKQHRQLLA-NSSPSGESKALREQLRQKEEQLQATQQQANMLKAELRDSS 387
Query: 119 --KDVQMREMYDKSVQLEVDLRGVEAMRSELLKVQADIKELTAVRQE-----LTDLQQVP 171
+D M E+Y V+ E +G R+E +++ ++E+ + Q+ +D+ V
Sbjct: 388 NARDRSMAELYRIRVEAETLKKGQADARAECSRLEQQLEEMKSSTQQEAQCKESDVLAVA 447
Query: 172 ALKAEIENVKQELQRARAAIEFDKKGYAENYEHGQVMEKKLISMARELEKLRAEIANSEK 231
L+ E+E+++ LQ A + Y + Y+ Q ++K+++ + K
Sbjct: 448 ELQREVEDLRLRLQMA-------AEHYKDKYKECQKLQKQVVKFNEQ---------QGVK 491
Query: 232 RARAAAAVGNPGASFNTNYGTPEAGYPSNPYPVSYSMNPVQAG 274
R+ + A P + +PEA P +P ++ + G
Sbjct: 492 RSPGSDAAAGPLS------ASPEASAPGSPSTSDAVLDAIIHG 528
>sp|Q5JLY8|GOGA5_ORYSJ Golgin-84 OS=Oryza sativa subsp. japonica GN=Os01g0744400 PE=2 SV=1
Length = 709
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 44/189 (23%)
Query: 64 AIIEEHLAAQHQDIQGLLADNQRLAATHV--ALKQELEVAQY--ELQRMVHYADSFRMDK 119
A EE LAA +D+ GL N+ L T V AL++EL + E +R+ H A
Sbjct: 371 AASEEKLAALQEDMDGL-KRNRELTETRVIQALREELATVERRAEEERIAHNATKM---- 425
Query: 120 DVQMREMYDKSVQLEVDL--RGVEAMRSELLKVQADIKELTAVRQELTDLQQVPALKAEI 177
+V+ EV+L R VEA + L ++Q + ++ EL +V L+ E
Sbjct: 426 ---------AAVEREVELEHRAVEASNA-LARIQRAADQSSSRAMELE--HKVAVLEVEC 473
Query: 178 ENVKQELQRARAAIEFDKKGYAENYEHGQVM-------------------EKKLISMARE 218
+++QELQ A +K +E E QV+ E K+ S+ E
Sbjct: 474 ASLQQELQEMEARNRRAQKKPSE--EANQVIQMQAWQEEVERARQSQREAETKISSLEAE 531
Query: 219 LEKLRAEIA 227
L+K+R E+A
Sbjct: 532 LQKMRVEMA 540
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,789,233
Number of Sequences: 539616
Number of extensions: 5594135
Number of successful extensions: 20598
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 857
Number of HSP's that attempted gapping in prelim test: 19386
Number of HSP's gapped (non-prelim): 1948
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)