BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038918
(291 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 227/331 (68%), Gaps = 48/331 (14%)
Query: 1 MALAR------ETCAFKENVYGDLSSPGSKKAPG---FVKSIGISNTSSPS--------- 42
MALA+ +TCA+ N+ GDLSS G V G SN + +
Sbjct: 1 MALAKDRIGSVQTCAYNGNLMGDLSSLDPYTFDGKHKLVPEEGESNIKNLAMSHSYSSSL 60
Query: 43 ----SANSNGYEFHNA----EEARDSLINFKSGHDHFMHANASNLLSFEQNETKD----- 89
SANSN + FH+A E SLINF+ G+D F+H N S LLSFEQN
Sbjct: 61 GSPSSANSNEFLFHSARHQAHEGAHSLINFRGGYDGFLHGNGS-LLSFEQNNKVSSQTSS 119
Query: 90 ---DEYSMWEGNFN------QINQKYSSDHRLMEDFNCFDTASNYGFMINNSARDCHGDW 140
++YS WE +FN Q+N K S+D RL+E+ NCF TASN+ I+NS ++ GDW
Sbjct: 120 GLKEDYSTWEVDFNCNYQWNQMNPKSSADPRLVENINCFHTASNFN-SIDNSEKEDPGDW 178
Query: 141 LYTEATAVTD-TILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK 199
LY+E T +TD +I E G+QDA+ KRP+ G+S QAVKKQC +ATKK K KTS P K
Sbjct: 179 LYSEGTIITDHSIQEPGTQDANFH-KRPHMGESTQAVKKQCN-SATKK--QKPKTS-PSK 233
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW
Sbjct: 234 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 293
Query: 260 PVQGGKAPDISQVREAIDAILSSQRDRSSSS 290
PVQGGKAPD+SQV+EAIDAILSSQ+DR+SSS
Sbjct: 294 PVQGGKAPDVSQVKEAIDAILSSQKDRNSSS 324
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 186/331 (56%), Positives = 226/331 (68%), Gaps = 45/331 (13%)
Query: 1 MALAR------ETCAFKENVYGDLSSPG-------------SKKAPGFVKSIGISNTSSP 41
MALA+ +TCA NV GDLSS G K + +K++ +S +
Sbjct: 1 MALAKDRMDSVQTCALYGNVMGDLSSLGPNYRFDEEGDRNFEKNSALMIKNLAMSPSPPS 60
Query: 42 SS----ANSNGYEFH---NAEEARDSLINFK-SGHDHFMHANASNLLSFEQN------ET 87
ANS F N E SLINFK +G D MHAN S L+SFEQ+ +
Sbjct: 61 LGSPSSANSGELVFQATDNQVEEAHSLINFKGTGFDSIMHANGS-LISFEQSNRVSQTSS 119
Query: 88 KDDEYSMWEGN------FNQINQKYSSDHRLMEDFNCFDTASNYGFMINNSARDCHGDWL 141
D+YS WEGN +NQIN K +++ RLMED NC+ +ASN+ + N++ ++ HGDWL
Sbjct: 120 HKDDYSAWEGNLSCNYQWNQINPKCNANPRLMEDLNCYQSASNFNSITNSAEKENHGDWL 179
Query: 142 YT-EATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKD 200
YT E+T VTD+I +S + DASS KRPN G+SMQA+KKQ +ATKK K K++ P KD
Sbjct: 180 YTHESTIVTDSIPDSATPDASSFHKRPNMGESMQALKKQ-RDSATKKP--KPKSAGPAKD 236
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP 260
PQSIAAKNRRERISERLK+LQ+LVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP
Sbjct: 237 PQSIAAKNRRERISERLKMLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP 296
Query: 261 VQGGKAPDISQVREAIDAILSSQ-RDRSSSS 290
VQGGKAPDISQV+ AIDA LSSQ +DR+S+S
Sbjct: 297 VQGGKAPDISQVKGAIDATLSSQTKDRNSNS 327
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/252 (64%), Positives = 197/252 (78%), Gaps = 27/252 (10%)
Query: 60 SLINFKSGHDHFMHANASNLLSFEQNE----------TKDDEYSMWEGNFN-----QINQ 104
S+I FK+ +++FMH N+ +LLSFEQNE +D+YS WE N N Q+N
Sbjct: 103 SVITFKTRYENFMH-NSGSLLSFEQNERGSQVTYTKVCHEDDYSNWEDNLNYDYQNQLNP 161
Query: 105 KYSSDHRLMEDFNCFDTASNYGFMINNSARD-CHGD----WLYTEATAVTDTILESGSQD 159
K +S+ RL+EDFNCF AS+YG M N+ ++ HG+ W+YTEATAVTD+I ES +++
Sbjct: 162 KLNSNPRLLEDFNCF-PASSYGSMSGNTPKENQHGEESFGWIYTEATAVTDSIQESATKE 220
Query: 160 ASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKI 219
S KRP+ G++MQA+K+QC AAT+K+ K S PPKDPQS+AAKNRRERISERLKI
Sbjct: 221 -SCFHKRPHMGETMQALKRQCT-AATRKSKPK---SIPPKDPQSLAAKNRRERISERLKI 275
Query: 220 LQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAI 279
LQ+LVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQV+EAIDAI
Sbjct: 276 LQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVKEAIDAI 335
Query: 280 LSSQRDRSSSSK 291
LSSQRD +SSSK
Sbjct: 336 LSSQRDTNSSSK 347
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/338 (54%), Positives = 223/338 (65%), Gaps = 55/338 (16%)
Query: 1 MALAR------ETCAFKENVYGDLSSPGS-------------------KKAPGF-VKSIG 34
MALA+ +TC + NV GD SS GS +K G +K++
Sbjct: 1 MALAKDRMGSVQTCPYNGNVMGDFSSMGSYGFDEYQKVAFYEEGNSTFEKTSGLMIKNLA 60
Query: 35 ISNTSSPSS----ANSNGYEF----HNAEEARDSLINFKS-GHDHFMHANASNLLSFEQN 85
++++ S A S F H AEEA SLI+FK G D+ MH N S LLSFEQ+
Sbjct: 61 MTSSPSSLGSPSSAISGELVFQATDHQAEEAH-SLISFKGIGFDNIMHNNGS-LLSFEQS 118
Query: 86 E------TKDDEYSMWEGN------FNQINQKYSSDHRLMEDFNCFDTASNYGFMINNSA 133
++ D+YS WEGN +N++N K ++ RLMEDFNCF A N+ I+ +
Sbjct: 119 SRVSQTSSQKDDYSAWEGNLSYNYQWNEMNPKCNTSPRLMEDFNCFQRAGNF---ISMTG 175
Query: 134 RDCHGDWLYTEATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQK 193
++ HGDWLY E+T V D+I +S + DASS KRPN G+SMQA+KKQC ATKK K
Sbjct: 176 KENHGDWLYAESTIVADSIQDSATPDASSFHKRPNMGESMQALKKQCN-NATKKPKPK-S 233
Query: 194 TSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+ P KD QSIAAKNRRERISERLK+LQ+LVPNGSKVDLVTMLEKAISYVKFLQLQVKVL
Sbjct: 234 AAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 293
Query: 254 ATDEFWPVQGGKAPDISQVREAIDAILSSQ-RDRSSSS 290
ATDE WPVQGGKAPDISQV+EAIDA+LSSQ +D +SSS
Sbjct: 294 ATDELWPVQGGKAPDISQVKEAIDALLSSQTKDGNSSS 331
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/290 (53%), Positives = 196/290 (67%), Gaps = 40/290 (13%)
Query: 34 GISNTSS-----PSSANSNGYEF----HNAEEARDSLINFKSGHDHFMHANASNLLSFEQ 84
G+SN S+ P + Y + + EEA SLI+FK G+ + + A+ S LLSF+Q
Sbjct: 58 GLSNDSAVTRSPPLCGSRKDYAYKGTNYQLEEAV-SLIDFK-GYSNILQASGS-LLSFQQ 114
Query: 85 NET-------KDD---EYSMWEGN-------FNQINQKYSSDHRLMEDFNCFDTASNYGF 127
N+ KD+ EY +WE N +NQ + + + D RL+E+ NCF T+S Y
Sbjct: 115 NKMVPLNCYLKDNGQKEYCVWENNLHQGHNHWNQTSPRSTRDMRLVENLNCFQTSSGYSP 174
Query: 128 MINNSARDCHGD----WLYTEATAVTD--TILESGSQDASSSLKRPNTGDSMQAVKKQCA 181
++NN+ HG WLY+ T D ++ +SG+Q+ S KRP+ G++M+A KKQC+
Sbjct: 175 IVNNAKEKQHGQSSSGWLYSAPTIPNDISSLHKSGAQE-SVLQKRPSMGENMKAAKKQCS 233
Query: 182 IAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 241
T+ K K+S P KDPQS+AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS
Sbjct: 234 ---TESKTPKHKSS-PSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 289
Query: 242 YVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSSQRDRSSSSK 291
YVKFLQLQVKVLATDEFWPVQGGK P+ISQV+E ID ILSSQR+RSS SK
Sbjct: 290 YVKFLQLQVKVLATDEFWPVQGGKPPEISQVKEVIDVILSSQRERSSCSK 339
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/276 (51%), Positives = 184/276 (66%), Gaps = 34/276 (12%)
Query: 34 GISNTSS-------PSSANSNGY----EFHNAEEARDSLINFKSGHDHFMHANASNLLSF 82
G+SN S+ P +NSN Y H E +SLINFK+ + + + + LS
Sbjct: 29 GLSNDSASAITHSPPLCSNSNEYVHNKSTHYQLEEAESLINFKANEYNTLIQGSESFLSV 88
Query: 83 EQNETKDDEYSMWEGNFNQINQ----KYSSDHRLMEDFNCFDTASNYGFMINNSARDCHG 138
+++ E ++ EG +NQ N K ++D RL+++F+CF+T+++Y + N + HG
Sbjct: 89 QKSWLFPKESNLHEG-YNQWNHAISPKSTTDMRLVQNFSCFETSADYSSIFNGAKEKQHG 147
Query: 139 D-----WLYTEATAVTDTILESGSQDASSSLKRPNTGDSMQAV--KKQC---AIAATKKT 188
+ WLY+E +D++LES +Q+ + KR + G++MQA KK C + AA K
Sbjct: 148 ESSSSGWLYSEPNVPSDSLLESAAQELVLT-KRSSMGENMQATNAKKPCTSASKAAKPKL 206
Query: 189 NNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQL 248
N P KDPQS+AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQL
Sbjct: 207 N-------PFKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQL 259
Query: 249 QVKVLATDEFWPVQGGKAPDISQVREAIDAILSSQR 284
QVKVLA DEFWPVQGGKAPDISQVR+AIDAILSSQR
Sbjct: 260 QVKVLAADEFWPVQGGKAPDISQVRQAIDAILSSQR 295
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/277 (51%), Positives = 171/277 (61%), Gaps = 37/277 (13%)
Query: 34 GISNTSS-----PSSANSNGYEF----HNAEEARDSLINFKSGHDHFMHANASNLLSFEQ 84
G+SN S+ P + GY + + EEA + LINFK G+ + M S LLSF+Q
Sbjct: 59 GLSNDSAITHSPPLCGSVKGYAYKGTNYQLEEA-EPLINFK-GYSNLMQGGGS-LLSFQQ 115
Query: 85 N----------ETKDDEYSMWEGN-------FNQINQKYSSDHRLMEDFNCFDTASNYGF 127
N E E +WE N +NQ + + + D RL+E+ NCF T+S Y
Sbjct: 116 NKMVPNNCYMKENGQKEVCVWENNLHQGRDHWNQTSPRNTRDMRLVENANCFQTSSGYIS 175
Query: 128 MINNSARDCHGD----WLYTEATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIA 183
++NN+ HG LY T + L S KRP G+SM+A KKQC+I
Sbjct: 176 IVNNAKEKQHGQSSSGLLYPAPTIPNASSLHKLGAQESVLQKRPFMGESMKAAKKQCSIE 235
Query: 184 ATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 243
+ +N S+P KDPQS+AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV
Sbjct: 236 SKTTKHN----SSPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 291
Query: 244 KFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAIL 280
KFLQLQVKVLATDEFWPVQGGK PDISQV+E ID IL
Sbjct: 292 KFLQLQVKVLATDEFWPVQGGKPPDISQVKEVIDTIL 328
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 144/281 (51%), Positives = 175/281 (62%), Gaps = 50/281 (17%)
Query: 24 KKAPGFVKSIGISNTSSPSSANSN-----GYEFHNAEEARDSLINFKSGHDHFMHANASN 78
K G++KS+ I + N + + ++ + SLINF GH N +
Sbjct: 16 KNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQSLINF--GHK----MNNES 69
Query: 79 LLSFEQNETKDDEYSMWEGNFNQINQKYSSD--HRLMEDFNCFDTASNYGFMINN--SAR 134
LLSFE Q++ Y+ D R+MED NCF TA+N+ NN ++
Sbjct: 70 LLSFEAQ------------GICQLDLTYNWDDQQRVMEDPNCFQTATNH----NNYSPSK 113
Query: 135 DCH-----GD------WLYTEATA-VTDTILES-GSQDASSSLKRPNT-GDSMQAV-KKQ 179
D H GD WLY+E+T +D+I E+ G+Q+ + KR +T G+S +V KKQ
Sbjct: 114 DHHHHNKNGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQ 173
Query: 180 CAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKA 239
C AA KK K SA KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKA
Sbjct: 174 CT-AAPKKQKPK---SATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKA 229
Query: 240 ISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAIL 280
ISYVKFLQLQVK+LATDEFWPVQGGKAPDISQV+EAID IL
Sbjct: 230 ISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVIL 270
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 165/267 (61%), Gaps = 37/267 (13%)
Query: 45 NSNGYEFHNAEEARDSLINFKSGHDHFMHANASNLLSFEQNE------TKDDEYSMWEGN 98
N+ G+ F+ + E + H+ M NAS+ +F+ + T + + +GN
Sbjct: 49 NNQGFVFYPSGETIED-------HNSLMDFNASSFFTFDNHRSLISPVTNGGAFPVVDGN 101
Query: 99 FNQINQKYSSDH------RLMEDFNCFDTASNYGFMINNSARDC----HGDWLYTEATAV 148
+ +S R+++ N F+T S++G N+ ++ +GDWLY+ +T
Sbjct: 102 MSYSYDGWSHHQVDSISPRVIKTPNSFETTSSFGLTSNSMSKPATNHGNGDWLYSGST-- 159
Query: 149 TDTILESGSQDASSSLK-----RPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQS 203
I+ GS+ S+S K RP TG++ Q KK + K K K + PKDPQS
Sbjct: 160 ---IVNIGSRHESTSPKLAGNKRPFTGENTQLSKKPSSGTNGKI---KPKATTSPKDPQS 213
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKAI YVKFLQ+QVKVLA DEFWP QG
Sbjct: 214 LAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFWPAQG 273
Query: 264 GKAPDISQVREAIDAIL-SSQRDRSSS 289
GKAPDISQV+EAIDAIL SSQRD +S+
Sbjct: 274 GKAPDISQVKEAIDAILSSSQRDSNST 300
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/240 (49%), Positives = 151/240 (62%), Gaps = 24/240 (10%)
Query: 68 HDHFMHANASNLLSFEQNE------TKDDEYSMWEGNFN------QINQKYSSDHRLMED 115
H+ M NAS+ SF+ + T +S+ E N + +Q S R+++
Sbjct: 65 HNSLMDFNASSFFSFDYHRSFISPVTNGGAFSVLEENMSYGYTGWSHHQMDSISPRVIKT 124
Query: 116 FNCFDTASNYGFMINNSARDC----HGDWLYTEATAVTDTILESGSQDASSSLKRPNTGD 171
N F+T S++ N+ + +GDWLY+++T V + + + KRP TGD
Sbjct: 125 SNSFETTSSFELTSNSRCKPATNHGNGDWLYSDSTIVNTGLRHESASPKLAGNKRPFTGD 184
Query: 172 SMQAVKKQCAIAATKKTNN--KQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSK 229
+ KK + TN K K + PKDPQS+AAKNRRERISERLK+LQELVPNG+K
Sbjct: 185 NTHLSKK-----PSSGTNGEAKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTK 239
Query: 230 VDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSS-QRDRSS 288
VDLVTMLEKAI YVKFLQ+QVKVLA DEFWP QGGKAPDISQV+EAIDAILSS QRD +S
Sbjct: 240 VDLVTMLEKAIGYVKFLQVQVKVLAADEFWPAQGGKAPDISQVKEAIDAILSSTQRDSNS 299
>gi|357492173|ref|XP_003616375.1| Transcription factor bHLH83 [Medicago truncatula]
gi|355517710|gb|AES99333.1| Transcription factor bHLH83 [Medicago truncatula]
Length = 325
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/331 (43%), Positives = 192/331 (58%), Gaps = 53/331 (16%)
Query: 1 MALARET---CAFKENVYGDLSSPGSKKA-----PGFVKSIGISNTSSPSSANSNG---- 48
MALA C F E S KK+ G + G+SN S+ +SA +N
Sbjct: 1 MALANNNILHCVFDETTMEINSVMSHKKSMIEEEDGSQSTNGLSNDSASASAITNSPTLC 60
Query: 49 ---YEFHN---AEEARDSLINFKSGHDHF--MHANASNLLSFEQNETKDDEYSMWEGNFN 100
+ ++N E +SLINFK +++ + + +LLSF+ + +E ++ + +N
Sbjct: 61 RKSHVYNNNTSYELEEESLINFKGNDEYYNNLMQGSESLLSFQHSWMVSNENNLQQ--WN 118
Query: 101 QINQKYSSDHRLMEDFNCFDTAS-NYGFMINNSARDCHGD----WLYTEATA------VT 149
+ K +++ +++ FN F+T+S +YG M N+ +G+ WLY+E
Sbjct: 119 NASPKSTTNLCMVQGFNSFETSSGSYGSMFNSVKEKQNGESSCGWLYSEPNVPCDDDDDD 178
Query: 150 DTILESGSQDASSSLKRPNTGDSMQAV--KKQCAIAATKKTNNKQKTSAPPKDPQSIAAK 207
D++++ S KR + G +MQ KK C AA+KK +K S P KDPQS+AAK
Sbjct: 179 DSLIKESETHESVLKKRSSMGGNMQPTNAKKPCT-AASKKEKHK---SNPSKDPQSVAAK 234
Query: 208 NRRERISERLKILQELVPNGSKVD--------------LVTMLEKAISYVKFLQLQVKVL 253
NRRERISERLKILQELVPNGSKVD LVTMLEKAISYVKFLQLQVKVL
Sbjct: 235 NRRERISERLKILQELVPNGSKVDFQISPQSYVAFFVDLVTMLEKAISYVKFLQLQVKVL 294
Query: 254 ATDEFWPVQGGKAPDISQVREAIDAILSSQR 284
A DEFWPV GGKAPDI QV++AIDAILSSQR
Sbjct: 295 AADEFWPVNGGKAPDIGQVKQAIDAILSSQR 325
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/240 (49%), Positives = 154/240 (64%), Gaps = 30/240 (12%)
Query: 72 MHANASNLLSFEQNE------TKDDEYSMWEGNFNQINQKYSSDH------RLMEDFNCF 119
M NAS+ +F+ + T + + +GN + +S R+++ N F
Sbjct: 1 MDFNASSFFTFDNHRSLISPVTNGGAFPVVDGNMSYSYDGWSHHQVDSISPRVIKTPNSF 60
Query: 120 DTASNYGFMINNSARDC----HGDWLYTEATAVTDTILESGSQDASSSLK-----RPNTG 170
+T S++G N+ ++ +GDWLY+ +T I+ GS+ S+S K RP TG
Sbjct: 61 ETTSSFGLTSNSMSKPATNHGNGDWLYSGST-----IVNIGSRHESTSPKLAGNKRPFTG 115
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
++ Q KK + K K K + PKDPQS+AAKNRRERISERLK+LQELVPNG+KV
Sbjct: 116 ENTQLSKKPSSGTNGKI---KPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKV 172
Query: 231 DLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAIL-SSQRDRSSS 289
DLVTMLEKAI YVKFLQ+QVKVLA DEFWP QGGKAPDISQV+EAIDAIL SSQRD +S+
Sbjct: 173 DLVTMLEKAIGYVKFLQVQVKVLAADEFWPAQGGKAPDISQVKEAIDAILSSSQRDSNST 232
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 153/245 (62%), Gaps = 17/245 (6%)
Query: 48 GYEFH-NAEEARDSLINFKSGHDHFMHANASNLLSFEQNETKDDEYSMWEGNFNQINQKY 106
G+ F+ + E+ ++SL++F N S+ L+F+ +E+ GN +
Sbjct: 60 GFVFYPSGEDPQNSLMDF----------NGSSFLNFDHHESFPPPAISCGGNSGAGGFSF 109
Query: 107 SSDHRLMEDFNCFDTASNYGFMINNSARDCHG--DWLYTEATAVTDTILESGSQDASSSL 164
+ + F ++ + + S G DWLY+++T VT S+
Sbjct: 110 LEGNNMSYGFTNWNHQHHMDIISPRSTETPQGQKDWLYSDSTVVTTGSRHESMSPKSAGN 169
Query: 165 KRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELV 224
KR TG+S Q KK + T K K TS PKDPQS+AAKNRRERISERLKILQELV
Sbjct: 170 KRSQTGESTQPSKKPNS-GVTGKAKPKPTTS--PKDPQSLAAKNRRERISERLKILQELV 226
Query: 225 PNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAIL-SSQ 283
PNG+KVDLVTMLEKAISYVKFLQ+QVKVLATDEFWP QGGKAPDISQV++AIDAIL SSQ
Sbjct: 227 PNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFWPAQGGKAPDISQVKDAIDAILSSSQ 286
Query: 284 RDRSS 288
RDR+S
Sbjct: 287 RDRNS 291
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/234 (51%), Positives = 148/234 (63%), Gaps = 9/234 (3%)
Query: 61 LINFKSGHDH---FMHANASNLLSFEQNETKDDEYSMWEGNFNQINQKYSSDHRLMEDFN 117
+ + SG DH M N S+ L+F+ +E+ G+ + + + F
Sbjct: 63 FVFYPSGEDHHNSLMDFNGSSFLNFDHHESFPPPAISCGGSSGGGGFSFLEGNNMSYGFT 122
Query: 118 CFDTASNYGFMINNSARDCHG--DWLYTEATAVTDTILESGSQDASSSLKRPNTGDSMQA 175
++ + + S G DWLY+++T VT S+ KR +TG+S Q
Sbjct: 123 NWNHQHHMDIISPRSTETPQGQKDWLYSDSTVVTTGSRNESLSPKSAGNKRSHTGESTQP 182
Query: 176 VKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM 235
KK + T KT K TS PKDPQS+AAKNRRERISERLKILQELVPNG+KVDLVTM
Sbjct: 183 SKK-LSSGVTGKTKPKPTTS--PKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTM 239
Query: 236 LEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAIL-SSQRDRSS 288
LEKAISYVKFLQ+QVKVLATDEFWP QGGKAPDISQV++AIDAIL SSQRDR+S
Sbjct: 240 LEKAISYVKFLQVQVKVLATDEFWPAQGGKAPDISQVKDAIDAILSSSQRDRNS 293
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/111 (77%), Positives = 94/111 (84%), Gaps = 1/111 (0%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+M KKQC A K K + P KDPQS+AAKNRRERISERL+ILQELVPNG+KVD
Sbjct: 179 AMSPSKKQCG-AGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVD 237
Query: 232 LVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSS 282
LVTMLEKAISYVKFLQLQVKVLATDEFWP QGGKAP+ISQV+EA+DAILSS
Sbjct: 238 LVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEISQVKEALDAILSS 288
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/111 (77%), Positives = 94/111 (84%), Gaps = 1/111 (0%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+M KKQC A K K + P KDPQS+AAKNRRERISERL+ILQELVPNG+KVD
Sbjct: 163 AMSPSKKQCG-AGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVD 221
Query: 232 LVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSS 282
LVTMLEKAISYVKFLQLQVKVLATDEFWP QGGKAP+ISQV+EA+DAILSS
Sbjct: 222 LVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEISQVKEALDAILSS 272
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/111 (77%), Positives = 94/111 (84%), Gaps = 1/111 (0%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+M KKQC A K K + P KDPQS+AAKNRRERISERL+ILQELVPNG+KVD
Sbjct: 181 AMSPSKKQCG-AGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVD 239
Query: 232 LVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSS 282
LVTMLEKAISYVKFLQLQVKVLATDEFWP QGGKAP+ISQV+EA+DAILSS
Sbjct: 240 LVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEISQVKEALDAILSS 290
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 98/124 (79%), Gaps = 3/124 (2%)
Query: 165 KRPNTGDSMQAV--KKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQE 222
KR QAV KK C A K + K ++ P KDPQS+AAKNRRERISERL+ LQE
Sbjct: 180 KRTYVSAEPQAVSPKKHCG-AGRKASKAKSPSTTPTKDPQSLAAKNRRERISERLRTLQE 238
Query: 223 LVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSS 282
LVPNG+KVDLVTMLEKAISYVKFLQLQVKVLATDEFWP QGGKAP+ISQVREA+DAILSS
Sbjct: 239 LVPNGTKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEISQVREALDAILSS 298
Query: 283 QRDR 286
R
Sbjct: 299 ASQR 302
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/111 (77%), Positives = 94/111 (84%), Gaps = 1/111 (0%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+M KKQC A K K + P KDPQS+AAKNRRERISERL+ILQELVPNG+KVD
Sbjct: 179 AMSPSKKQCG-AGRKAGKAKSVPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVD 237
Query: 232 LVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSS 282
LVTMLEKAISYVKFLQLQVKVLATDEFWP QGGKAP+ISQV+EA+DAILSS
Sbjct: 238 LVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEISQVKEALDAILSS 288
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/112 (78%), Positives = 96/112 (85%), Gaps = 4/112 (3%)
Query: 174 QAV---KKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
QAV KK C A K + K ++AP KDPQS+AAKNRRERISERL+ LQELVPNG+KV
Sbjct: 175 QAVSPNKKHCG-AGRKASKAKLASTAPTKDPQSLAAKNRRERISERLRALQELVPNGTKV 233
Query: 231 DLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSS 282
DLVTMLEKAISYVKFLQLQVKVLATDEFWP QGGKAP+ISQVREA+DAILSS
Sbjct: 234 DLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEISQVREALDAILSS 285
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 110
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/108 (83%), Positives = 95/108 (87%), Gaps = 4/108 (3%)
Query: 177 KKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTML 236
KK C +A+K K S P +DPQS+AAKNRRERISERLKILQELVPNGSKVDLVTML
Sbjct: 7 KKPCT-SASKAAKPK---SNPSQDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTML 62
Query: 237 EKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSSQR 284
EKAISYVKFLQLQVKVLA DEFWPVQGGKAPDISQVR+AIDAILSSQR
Sbjct: 63 EKAISYVKFLQLQVKVLAADEFWPVQGGKAPDISQVRQAIDAILSSQR 110
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 94/110 (85%), Gaps = 2/110 (1%)
Query: 175 AVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVT 234
A KKQC A K + + AP KDPQS+AAK RRE+I+E+LK+LQ+LVPNG+KVDLVT
Sbjct: 180 AAKKQCGGGARK--SKAKAAPAPTKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVT 237
Query: 235 MLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSSQR 284
MLEKAI+YVKFLQLQVKVLA DEFWP QGGKAP++SQV++A+DAILSSQ+
Sbjct: 238 MLEKAITYVKFLQLQVKVLAADEFWPAQGGKAPELSQVKDALDAILSSQQ 287
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 86/100 (86%)
Query: 183 AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
A K K AP KDPQS+AAK RRE+I+E+LK+LQ+LVPNG+KVDLVTMLEKAI+Y
Sbjct: 220 ARMKSKQAKLAAPAPTKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITY 279
Query: 243 VKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSS 282
VKFLQLQVKVLA DEFWP QGGKAPD+SQV++A+DAILSS
Sbjct: 280 VKFLQLQVKVLAADEFWPAQGGKAPDLSQVKDALDAILSS 319
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 91/114 (79%), Gaps = 5/114 (4%)
Query: 170 GDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSK 229
G++ A KKQC + K DPQS AK RRERISERLK+LQ+LVPNG+K
Sbjct: 146 GETQAAAKKQCGGSKKSKAKAAPAK-----DPQSAVAKVRRERISERLKVLQDLVPNGTK 200
Query: 230 VDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSSQ 283
VD+VTMLEKAI+YVKFLQLQVKVLATD+FWPVQGGKAP++SQV++A+DAILSSQ
Sbjct: 201 VDMVTMLEKAITYVKFLQLQVKVLATDDFWPVQGGKAPELSQVKDALDAILSSQ 254
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 97/126 (76%), Gaps = 9/126 (7%)
Query: 167 PNTGDSMQAVKKQC---------AIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERL 217
P +G++ A KKQC A A++ + S + PQS AAK RRERISERL
Sbjct: 181 PQSGEARAAGKKQCRKGSKPNKAASASSPSPSPSPSPSPNKEQPQSAAAKVRRERISERL 240
Query: 218 KILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAID 277
K+LQ+LVPNG+KVDLVTMLEKAI+YVKFLQLQVKVLATDEFWP QGGKAP++SQV++A+D
Sbjct: 241 KVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDEFWPAQGGKAPELSQVKDALD 300
Query: 278 AILSSQ 283
AILSSQ
Sbjct: 301 AILSSQ 306
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 80/83 (96%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP 260
PQS AAK RRERISERLK+LQ+LVPNG+KVDLVTMLEKAI+YVKFLQLQVKVLATDEFWP
Sbjct: 209 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDEFWP 268
Query: 261 VQGGKAPDISQVREAIDAILSSQ 283
QGGKAP++SQV++A+DAILSSQ
Sbjct: 269 AQGGKAPELSQVKDALDAILSSQ 291
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 80/83 (96%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP 260
PQS AAK RRERISERLK+LQ+LVPNG+KVDLVTMLEKAI+YVKFLQLQVKVLATDEFWP
Sbjct: 208 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDEFWP 267
Query: 261 VQGGKAPDISQVREAIDAILSSQ 283
QGGKAP++SQV++A+DAILSSQ
Sbjct: 268 AQGGKAPELSQVKDALDAILSSQ 290
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 80/83 (96%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP 260
PQS AAK RRERISERLK+LQ+LVPNG+KVDLVTMLEKAI+YVKFLQLQVKVLATDEFWP
Sbjct: 202 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDEFWP 261
Query: 261 VQGGKAPDISQVREAIDAILSSQ 283
QGGKAP++SQV++A+DAILSSQ
Sbjct: 262 AQGGKAPELSQVKDALDAILSSQ 284
>gi|125555439|gb|EAZ01045.1| hypothetical protein OsI_23077 [Oryza sativa Indica Group]
Length = 294
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 85/126 (67%), Gaps = 14/126 (11%)
Query: 155 SGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERIS 214
SGSQ + P G + K+ ++ NNK+ QS AAK+RRERIS
Sbjct: 167 SGSQKRARPPPSPLQGSELHEYSKK------QRANNKET--------QSSAAKSRRERIS 212
Query: 215 ERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVRE 274
ERL+ LQELVP+G KVD+VTML++AISYVKF+Q+Q++VL TD FWP G PDIS+V++
Sbjct: 213 ERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVLETDAFWPASDGATPDISRVKD 272
Query: 275 AIDAIL 280
A+DAI+
Sbjct: 273 ALDAII 278
>gi|52077404|dbj|BAD46515.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|125597317|gb|EAZ37097.1| hypothetical protein OsJ_21438 [Oryza sativa Japonica Group]
Length = 294
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 85/126 (67%), Gaps = 14/126 (11%)
Query: 155 SGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERIS 214
SGSQ + P G + K+ ++ NNK+ QS AAK+RRERIS
Sbjct: 167 SGSQRRARPPPSPLQGSELHEYSKK------QRANNKET--------QSSAAKSRRERIS 212
Query: 215 ERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVRE 274
ERL+ LQELVP+G KVD+VTML++AISYVKF+Q+Q++VL TD FWP G PDIS+V++
Sbjct: 213 ERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVLETDAFWPASDGATPDISRVKD 272
Query: 275 AIDAIL 280
A+DAI+
Sbjct: 273 ALDAII 278
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
Query: 177 KKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTML 236
K++ A+ K KQ + DPQSIAA+ RRERIS+RLKILQEL+PNGSKVDLVTML
Sbjct: 397 KREPALNTNLKPRAKQGCA---NDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTML 453
Query: 237 EKAISYVKFLQLQVKVLATDEFWPVQG 263
EKAI+YVKFLQLQVKVL DE+WP +G
Sbjct: 454 EKAINYVKFLQLQVKVLMNDEYWPPKG 480
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
Query: 177 KKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTML 236
K++ A+ K KQ + DPQSIAA+ RRERIS+RLKILQEL+PNGSKVDLVTML
Sbjct: 397 KREPALNTNLKPRAKQGCA---NDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTML 453
Query: 237 EKAISYVKFLQLQVKVLATDEFWPVQG 263
EKAI+YVKFLQLQVKVL DE+WP +G
Sbjct: 454 EKAINYVKFLQLQVKVLMNDEYWPPKG 480
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/61 (83%), Positives = 59/61 (96%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQSIAA++RRERIS+RLKILQELVPN +KVDLVTMLEKAI+YVKFLQLQVKVL +D++W
Sbjct: 367 DPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVKVLTSDDYW 426
Query: 260 P 260
P
Sbjct: 427 P 427
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 56/72 (77%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQSIAA+ RRERISERLK+LQ L+PNG KVD+VTMLEKAISYV+ L+ Q+K+L D W
Sbjct: 648 DPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEFQIKMLKNDSLW 707
Query: 260 PVQGGKAPDISQ 271
P G P+ Q
Sbjct: 708 PKALGPLPNTLQ 719
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 57/72 (79%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQSIAA+ RRERISERLK+LQ L+PNG KVD+VTMLEKAI+YV+ L+LQ+K+L D W
Sbjct: 763 DPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQIKMLKNDSIW 822
Query: 260 PVQGGKAPDISQ 271
P G P+ Q
Sbjct: 823 PKALGPLPNTLQ 834
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 56/72 (77%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQSIAA+ RRERISERLK+LQ L+PNG KVD+VTMLEKAISYV+ L+ Q+K+L D W
Sbjct: 831 DPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEFQIKMLKNDSLW 890
Query: 260 PVQGGKAPDISQ 271
P G P+ Q
Sbjct: 891 PKALGPLPNTLQ 902
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 57/72 (79%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQSIAA+ RRERISERLK+LQ L+PNG KVD+VTMLEKAI+YV+ L+LQ+K+L D W
Sbjct: 57 DPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQIKMLKNDSIW 116
Query: 260 PVQGGKAPDISQ 271
P G P+ Q
Sbjct: 117 PKALGPLPNTLQ 128
>gi|218187373|gb|EEC69800.1| hypothetical protein OsI_00096 [Oryza sativa Indica Group]
Length = 71
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/55 (85%), Positives = 53/55 (96%)
Query: 230 VDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSSQR 284
VDLVTMLEKAI+YVKFLQLQVKVLATDEFWP QGGKAP++SQV++A+DAILSSQ
Sbjct: 14 VDLVTMLEKAINYVKFLQLQVKVLATDEFWPAQGGKAPELSQVKDALDAILSSQH 68
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 61/77 (79%)
Query: 183 AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
+A K + + + P DPQS+ A+ RRERI+ERLKILQ LVPNG+KVD+ TMLE+A+ Y
Sbjct: 216 SAAKLSGKSRSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQY 275
Query: 243 VKFLQLQVKVLATDEFW 259
VKFLQLQ+K+L++D+ W
Sbjct: 276 VKFLQLQIKLLSSDDTW 292
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 55/60 (91%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A++RRERI+ERLK LQ LVPNG+KVD+VTMLE+AI YVKFLQLQV +L++DE+W
Sbjct: 220 DPQSVYARHRRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFLQLQVNMLSSDEYW 279
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 61/85 (71%)
Query: 175 AVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVT 234
++ Q + A K Q DPQS+ A+ RRERI+ERLKILQ LVPNG+KVD+ T
Sbjct: 205 SIGSQESPVAAKSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDIST 264
Query: 235 MLEKAISYVKFLQLQVKVLATDEFW 259
MLE+A+ YVKFLQLQ+K+L++DE W
Sbjct: 265 MLEEAMHYVKFLQLQIKLLSSDEMW 289
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 61/85 (71%)
Query: 175 AVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVT 234
++ Q + A K Q DPQS+ A+ RRERI+ERLKILQ LVPNG+KVD+ T
Sbjct: 205 SIGSQESPVAAKSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDIST 264
Query: 235 MLEKAISYVKFLQLQVKVLATDEFW 259
MLE+A+ YVKFLQLQ+K+L++DE W
Sbjct: 265 MLEEAMHYVKFLQLQIKLLSSDEMW 289
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
Query: 184 ATKKTNNKQKTSA---PPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240
A+K N KT A DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+
Sbjct: 255 ASKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAV 314
Query: 241 SYVKFLQLQVKVLATDEFW 259
YVKFLQLQ+K+L++D+ W
Sbjct: 315 HYVKFLQLQIKLLSSDDLW 333
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTS-APPKDPQSIAAKNRRERISERLKILQELVPNGSK 229
D +A + I ++ +N K + S DPQS+ A+ RRERI+ERL+ILQ LVPNG+K
Sbjct: 226 DCNEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTK 285
Query: 230 VDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
VD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 286 VDISTMLEEAVQYVKFLQLQIKLLSSDDLW 315
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 178 KQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE 237
++ +AA +Q T+ DPQS+ A+ RRERI+ERLK+LQ LVPNG+KVD+ TMLE
Sbjct: 209 QESPVAANPSGKGRQSTT----DPQSLYARKRRERINERLKVLQNLVPNGTKVDISTMLE 264
Query: 238 KAISYVKFLQLQVKVLATDEFW 259
+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 265 EAVQYVKFLQLQIKLLSSDDMW 286
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQSI A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 216 DPQSIYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 275
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 66/85 (77%), Gaps = 6/85 (7%)
Query: 181 AIAAT------KKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVT 234
+IAAT K+++N + KD QS+ AK RRERI+ERL+ILQ+LVPNG+KVD+ T
Sbjct: 151 SIAATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDIST 210
Query: 235 MLEKAISYVKFLQLQVKVLATDEFW 259
MLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 211 MLEEAVQYVKFLQLQIKLLSSDDTW 235
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 54/56 (96%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQSIAA++RRERIS+RLKILQELVPN +KVDLVTMLEKAI+YVKFLQLQVKV A+
Sbjct: 367 DPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEKAINYVKFLQLQVKVGAS 422
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 334
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%)
Query: 183 AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
AA + + + DPQS+ A+ RRERI+ERLKILQ LVPNG+KVD+ TMLE+A+ Y
Sbjct: 251 AALNSKDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEY 310
Query: 243 VKFLQLQVKVLATDEFW 259
VKFLQLQ+K+L++D+ W
Sbjct: 311 VKFLQLQIKLLSSDDLW 327
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQSI A+ RRE+I+ERLKILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 255 DPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 314
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 57/68 (83%)
Query: 192 QKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVK 251
+ T+ DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K
Sbjct: 265 RATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIK 324
Query: 252 VLATDEFW 259
+L++D+ W
Sbjct: 325 LLSSDDLW 332
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 305
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%)
Query: 183 AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
AA + + + DPQS+ A+ RRERI+ERLKILQ LVPNG+KVD+ TMLE+A+ Y
Sbjct: 247 AALNSKDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEY 306
Query: 243 VKFLQLQVKVLATDEFW 259
VKFLQLQ+K+L++D+ W
Sbjct: 307 VKFLQLQIKLLSSDDLW 323
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%)
Query: 183 AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
AA + + + DPQS+ A+ RRERI+ERLKILQ LVPNG+KVD+ TMLE+A+ Y
Sbjct: 246 AALNSKDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEY 305
Query: 243 VKFLQLQVKVLATDEFW 259
VKFLQLQ+K+L++D+ W
Sbjct: 306 VKFLQLQIKLLSSDDLW 322
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 305
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 66/85 (77%), Gaps = 6/85 (7%)
Query: 181 AIAAT------KKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVT 234
+IAAT K+++N + KD QS+ AK RRERI+ERL+ILQ+LVPNG+KVD+ T
Sbjct: 139 SIAATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDIST 198
Query: 235 MLEKAISYVKFLQLQVKVLATDEFW 259
MLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 199 MLEEAVQYVKFLQLQIKLLSSDDTW 223
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 55/60 (91%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ+LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++DE W
Sbjct: 246 DPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDEMW 305
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 181 AIAATKKTNNKQKTS-APPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKA 239
AI TN K + DPQS+ A++RRE+I+ERLK LQ LVPNG+KVD+VTML++A
Sbjct: 431 AIGPALNTNGKPRARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEA 490
Query: 240 ISYVKFLQLQVKVLATDEFW 259
I YV+FLQLQV +L +DE+W
Sbjct: 491 IHYVQFLQLQVTLLKSDEYW 510
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 334
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 272 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 331
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 194 TSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
T DPQS+ A+ RRERI+ERL+ILQ+LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L
Sbjct: 240 TRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 299
Query: 254 ATDEFW 259
++D+ W
Sbjct: 300 SSDDLW 305
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 193 DPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 252
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 194 TSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
T DPQS+ A+ RRERI+ERL+ILQ+LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L
Sbjct: 240 TRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 299
Query: 254 ATDEFW 259
++D+ W
Sbjct: 300 SSDDLW 305
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 60/73 (82%)
Query: 187 KTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFL 246
+++N P K+ QS+ AK RRERI+E+L++LQ+L+PNG+KVD+ TMLE+A+ YVKFL
Sbjct: 159 QSDNTSGCKRPSKNMQSLYAKKRRERINEKLRVLQQLIPNGTKVDISTMLEEAVQYVKFL 218
Query: 247 QLQVKVLATDEFW 259
QLQ+KVL++DE W
Sbjct: 219 QLQIKVLSSDETW 231
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 55/60 (91%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A++YVKFLQLQ+K+L++D+ W
Sbjct: 273 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLW 332
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 183 AATKKTNNKQKTS-APPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 241
+A +N K + S DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+
Sbjct: 278 SAALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVH 337
Query: 242 YVKFLQLQVKVLATDEFW 259
YVKFLQLQ+K+L++D+ W
Sbjct: 338 YVKFLQLQIKLLSSDDMW 355
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 183 AATKKTNNKQKTS-APPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 241
+A +N K + S DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+
Sbjct: 278 SAALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVH 337
Query: 242 YVKFLQLQVKVLATDEFW 259
YVKFLQLQ+K+L++D+ W
Sbjct: 338 YVKFLQLQIKLLSSDDMW 355
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 53/60 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++DE W
Sbjct: 225 DPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDEMW 284
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERLKILQ L+PNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMW 300
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 53/63 (84%)
Query: 197 PPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATD 256
P DPQS+ AK RRERI+ RL+ LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D
Sbjct: 210 PATDPQSLYAKQRRERINARLRTLQNLVPNGTKVDISTMLEEAVRYVKFLQLQIKLLSSD 269
Query: 257 EFW 259
E W
Sbjct: 270 ELW 272
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERLKILQ L+PNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMW 300
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERLKILQ L+PNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 241 DPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMW 300
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 60/76 (78%), Gaps = 3/76 (3%)
Query: 181 AIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240
A+ K ++Q T+ DPQSIAA+ RRERIS+RLKILQ+LVPNGSKVDLVTMLEKAI
Sbjct: 226 ALNTNLKPRSRQGTA---NDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAI 282
Query: 241 SYVKFLQLQVKVLATD 256
+YVKF+QLQ++ D
Sbjct: 283 NYVKFMQLQLQASVVD 298
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 196 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDMW 255
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 60/76 (78%), Gaps = 3/76 (3%)
Query: 181 AIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240
A+ K ++Q T+ DPQSIAA+ RRERIS+RLKILQ+LVPNGSKVDLVTMLEKAI
Sbjct: 226 ALNTNLKPRSRQGTA---NDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAI 282
Query: 241 SYVKFLQLQVKVLATD 256
+YVKF+QLQ++ D
Sbjct: 283 NYVKFMQLQLQASVVD 298
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 53/60 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQ + AK RRERI+ERLKILQ LVPNG+KVD+ TMLE+A+ YVKFLQ+Q+K+L++D+ W
Sbjct: 247 DPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQVQIKLLSSDDHW 306
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 53/60 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+KVL++D+ W
Sbjct: 224 DPQSLYARKRRERINERLKTLQTLVPNGTKVDMSTMLEEAVHYVKFLQLQIKVLSSDDMW 283
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 55/60 (91%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A++YVKFLQLQ+K+L++D+ W
Sbjct: 270 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLW 329
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 246 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 305
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Query: 144 EATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQS 203
E A D SG ++ N+G + A K ++ + K + ++ DPQS
Sbjct: 154 ETNASVDGHSSSGYTSEEHNMYEENSGGTTSASKSTMSLNSNGKARANRGSAT---DPQS 210
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
+ A+ RRE+I+ERL+ LQ LVPNG+KVD+ TMLE AI YVKFLQLQ+K+L++D+ W
Sbjct: 211 LYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIKLLSSDDMW 266
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++++ W
Sbjct: 273 DPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSEDLW 332
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 59/76 (77%)
Query: 184 ATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 243
A K + S+P D QSI A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YV
Sbjct: 189 APKLGRKSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYV 248
Query: 244 KFLQLQVKVLATDEFW 259
KFLQLQ+K+L++++ W
Sbjct: 249 KFLQLQIKLLSSEDMW 264
>gi|77556222|gb|ABA99018.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125579480|gb|EAZ20626.1| hypothetical protein OsJ_36241 [Oryza sativa Japonica Group]
Length = 198
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 55/67 (82%)
Query: 193 KTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
K S + QS AKNRR+RI+ERL+ILQEL+PNG+KVD+ TMLE+AI YVKFL LQ+K+
Sbjct: 110 KHSVSAESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKL 169
Query: 253 LATDEFW 259
L++DE W
Sbjct: 170 LSSDEMW 176
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 57/66 (86%)
Query: 194 TSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
T++ DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L
Sbjct: 267 TTSAAADPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 326
Query: 254 ATDEFW 259
++++ W
Sbjct: 327 SSEDLW 332
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++++ W
Sbjct: 233 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSEDLW 292
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 183 AATKKTNNKQKTS-APPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 241
+A +N K + S DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+
Sbjct: 84 SAALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVH 143
Query: 242 YVKFLQLQVKVLATDEFW 259
YVKFLQLQ+K+L++D+ W
Sbjct: 144 YVKFLQLQIKLLSSDDMW 161
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 196 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDTW 255
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
+PQSI A+ RRERI+ERLKILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+++L++D+ W
Sbjct: 235 EPQSIYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIRLLSSDDTW 294
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 182 IAATKKTNNKQK-TSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240
++ +N K + T DPQS+ A+ RRERI+ERLKILQ LVPNG+KVD+ TMLE+A+
Sbjct: 262 VSGVLNSNGKTRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAV 321
Query: 241 SYVKFLQLQVKVLATDEFW 259
YV FLQLQ+K+L++D+ W
Sbjct: 322 HYVNFLQLQIKLLSSDDLW 340
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Query: 144 EATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQS 203
E A D SG ++ N+G + A K ++ + K + ++ DPQS
Sbjct: 140 ETNASVDGHSSSGYTSEEHNMYEENSGGTTSASKSTMSLNSNGKARANRGSAT---DPQS 196
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
+ A+ RRE+I+ERL+ LQ LVPNG+KVD+ TMLE AI YVKFLQLQ+K+L++D+ W
Sbjct: 197 LYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIKLLSSDDMW 252
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 53/60 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KV + TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVHISTMLEEAVQYVKFLQLQIKLLSSDDLW 305
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
+PQSI A+ RRERI+ERLK+LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+++L++D+ W
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLLSSDDTW 281
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 10/90 (11%)
Query: 170 GDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSK 229
G++ + KK C A+ DPQS+ A+ RRERI+ERL+ILQ LVPNG+K
Sbjct: 185 GNTYSSAKKTCTRASRGGAT----------DPQSLYARKRRERINERLRILQNLVPNGTK 234
Query: 230 VDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
VD+ TMLE+A YVKFLQLQ+K+L++D+ W
Sbjct: 235 VDISTMLEEAAQYVKFLQLQIKLLSSDDMW 264
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A++RRE+I+ERLK LQ LVPNG+KVD+VTML++AI YVKFLQ QV++L +DEFW
Sbjct: 451 DPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVELLKSDEFW 510
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRE+I+ERLK+LQ LVPNG+KVD+ TMLE+A+ Y+KF+QLQ+K+L++D+ W
Sbjct: 255 DPQSLYARKRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQIKLLSSDDMW 314
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Query: 183 AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
++TKK + A DPQS+ A+ RRERI+ERL+ILQ+LVPNG+KVD+ TMLE+A Y
Sbjct: 183 SSTKKAYTRASRGAA-TDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAAQY 241
Query: 243 VKFLQLQVKVLATDEFW 259
VKFLQLQ+K+L++D+ W
Sbjct: 242 VKFLQLQIKLLSSDDTW 258
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 62/79 (78%), Gaps = 3/79 (3%)
Query: 181 AIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240
A++A +K K + + KD QS AK RR+RI+ERL+ILQ+L+PNG+KVD+ TMLE+A+
Sbjct: 88 ALSAPRKNGKKSRAA---KDSQSHYAKKRRQRINERLRILQKLIPNGTKVDISTMLEEAV 144
Query: 241 SYVKFLQLQVKVLATDEFW 259
YVKFL LQ+K+L++DE W
Sbjct: 145 QYVKFLHLQIKLLSSDEMW 163
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%)
Query: 194 TSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
T DPQS+ A+ RRE+I+ERLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L
Sbjct: 170 TKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 229
Query: 254 ATDEFW 259
++D+ W
Sbjct: 230 SSDDLW 235
>gi|125536776|gb|EAY83264.1| hypothetical protein OsI_38473 [Oryza sativa Indica Group]
Length = 198
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 193 KTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
K S + Q AKNRR+RI+ERL+ILQEL+PNG+KVD+ TMLE+AI YVKFL LQ+K+
Sbjct: 110 KHSVSAESSQPYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKL 169
Query: 253 LATDEFW 259
L++DE W
Sbjct: 170 LSSDEMW 176
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 52/60 (86%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI +RL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ K+L++D+ W
Sbjct: 249 DPQSLYARKRRERIDDRLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQNKLLSSDDLW 308
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%)
Query: 194 TSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
T DPQS+ A+ RRE+I+ERLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L
Sbjct: 170 TKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 229
Query: 254 ATDEFW 259
++D+ W
Sbjct: 230 SSDDLW 235
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 52/60 (86%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI++RLK LQ LVPNG+KVD+ TMLE A+ YVKFLQLQ+K+L++D+ W
Sbjct: 142 DPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSDDLW 201
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 52/58 (89%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
QS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++DE W
Sbjct: 221 QSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDEMW 278
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 94.4 bits (233), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A++RRE+I+ERLK LQ LVPNG+KVD+VTML++AI YV+FLQLQV +L +DE+W
Sbjct: 5 DPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVTLLKSDEYW 64
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 10/90 (11%)
Query: 170 GDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSK 229
G++ + KK CA A+ +PQS+ A+ RRERI+ERL+ILQ LVPNG+K
Sbjct: 183 GNTNSSSKKTCARASRGAAT----------EPQSLYARKRRERINERLRILQNLVPNGTK 232
Query: 230 VDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
VD+ TMLE+A YVKFLQLQ+K+L+ D+ W
Sbjct: 233 VDISTMLEEAAQYVKFLQLQIKLLSCDDTW 262
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 54/60 (90%), Gaps = 2/60 (3%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQSI A+ RRERI+ERL+ LQ LVPNG+KVD+VTMLE+AI+YVKFLQLQ +L++DE+W
Sbjct: 246 DPQSIYARQRRERINERLRALQGLVPNGAKVDIVTMLEEAINYVKFLQLQ--LLSSDEYW 303
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 52/60 (86%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI++RLK LQ LVPNG+KVD+ TMLE A+ YVKFLQLQ+K+L++++ W
Sbjct: 141 DPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLW 200
>gi|242069235|ref|XP_002449894.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
gi|241935737|gb|EES08882.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
Length = 242
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 54/61 (88%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
KD QS+ AK RRERI+ERL+ LQ+L+PNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++++
Sbjct: 159 KDLQSLYAKRRRERINERLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLLSSEDT 218
Query: 259 W 259
W
Sbjct: 219 W 219
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 51/60 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERLKILQ +VPNG+KVD+ TMLE+A+ YVKFLQLQ+KV A F+
Sbjct: 279 DPQSLYARKRRERINERLKILQHIVPNGTKVDISTMLEEAVHYVKFLQLQIKVKALVNFF 338
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/60 (70%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A++RRE+I+ERLK LQ LVPNG+KVD+VTML++AI YVKFLQ QV++L +DEFW
Sbjct: 5 DPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVELLKSDEFW 64
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 13/73 (17%)
Query: 200 DPQSIAAK-------------NRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFL 246
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFL
Sbjct: 246 DPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFL 305
Query: 247 QLQVKVLATDEFW 259
QLQ+K+L++D+ W
Sbjct: 306 QLQIKLLSSDDLW 318
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 10/87 (11%)
Query: 183 AATKKTNNKQKTS-APPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 241
T +N K + S DPQS+ A+ RRERI+ERL++LQ LVPNG+KVD+ TMLE+A++
Sbjct: 265 GTTLNSNGKTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVN 324
Query: 242 YVKFLQLQVKV---------LATDEFW 259
YVKFLQ Q+KV L++D+ W
Sbjct: 325 YVKFLQTQIKVCTIGDIIYLLSSDDMW 351
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 62/105 (59%), Gaps = 17/105 (16%)
Query: 184 ATKKTNNKQKTSAPPK-------------DPQSIAAKNRRERISERLKILQELVPNGSKV 230
A+ T +APP+ DP SIA + RRERI+ER+K LQELVPNG+K
Sbjct: 118 ASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT 177
Query: 231 DLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREA 275
D +ML++ I YVKFLQLQVKVL+ GG A SQ+ EA
Sbjct: 178 DKASMLDEIIDYVKFLQLQVKVLSMSRL----GGAASVSSQISEA 218
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 62/105 (59%), Gaps = 17/105 (16%)
Query: 184 ATKKTNNKQKTSAPPK-------------DPQSIAAKNRRERISERLKILQELVPNGSKV 230
A+ T +APP+ DP SIA + RRERI+ER+K LQELVPNG+K
Sbjct: 118 ASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT 177
Query: 231 DLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREA 275
D +ML++ I YVKFLQLQVKVL+ GG A SQ+ EA
Sbjct: 178 DKASMLDEIIDYVKFLQLQVKVLSMSRL----GGAASVSSQISEA 218
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 52/60 (86%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A++RRE+I+ERLK LQ LVPNG +VD+VTMLE+AI +VKFL+ Q+++L +D+ W
Sbjct: 479 DPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELLRSDDRW 538
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/60 (68%), Positives = 53/60 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A++RRE+I+ERLK LQ LVPNG+KVD+VTML++AI YVKFLQ QV++L +DE W
Sbjct: 5 DPQSVYARHRREKINERLKSLQNLVPNGAKVDIVTMLDEAIHYVKFLQNQVELLKSDELW 64
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 4/76 (5%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPNG+K D +ML++ I YVKFLQLQVKVL+
Sbjct: 147 DPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRL- 205
Query: 260 PVQGGKAPDISQVREA 275
GG A SQ+ EA
Sbjct: 206 ---GGAASVSSQLSEA 218
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 62/105 (59%), Gaps = 17/105 (16%)
Query: 184 ATKKTNNKQKTSAPPK-------------DPQSIAAKNRRERISERLKILQELVPNGSKV 230
A+ T +APP+ DP SIA + RRERI+ER+K LQELVPNG+K
Sbjct: 118 ASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT 177
Query: 231 DLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREA 275
D +ML++ I YV+FLQLQVKVL+ GG A SQ+ EA
Sbjct: 178 DKASMLDEIIDYVEFLQLQVKVLSMSRL----GGAASVSSQISEA 218
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
Query: 174 QAVKKQCAIAATKKTNNKQKTSA---PPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
QA AT + K K A DP SIA + RRERI+ER+K LQELVPNG+K
Sbjct: 110 QATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT 169
Query: 231 DLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVRE 274
D +ML++ I YVKFLQLQVKVL+ GG A SQ+ E
Sbjct: 170 DKASMLDEIIDYVKFLQLQVKVLSMSRL----GGAASASSQISE 209
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 52/73 (71%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YV+FLQLQVKVL+
Sbjct: 203 DPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFLQLQVKVLSMSRLG 262
Query: 260 PVQGGKAPDISQV 272
GG AP ++ +
Sbjct: 263 GAAGGMAPLVASM 275
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPNG+K D +ML++ I YVKFLQLQVKVL+
Sbjct: 196 DPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRL- 254
Query: 260 PVQGGKAPDISQVRE 274
GG A SQ+ E
Sbjct: 255 ---GGAASASSQISE 266
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
Query: 174 QAVKKQCAIAATKKTNNKQKTSA---PPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
QA AT + K K A DP SIA + RRERI+ER+K LQELVPNG+K
Sbjct: 110 QATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT 169
Query: 231 DLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVRE 274
D +ML++ I YVKFLQLQVKVL+ GG A SQ+ E
Sbjct: 170 DKASMLDEIIDYVKFLQLQVKVLSMSRL----GGAASASSQISE 209
>gi|414877869|tpg|DAA55000.1| TPA: putative clathrin heavy chain family protein [Zea mays]
Length = 898
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 49/54 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+PQSI A+ RRERI+ERLK+LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ++++
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLI 275
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 48/59 (81%)
Query: 194 TSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
T DPQS+ A+ RRE+I+ERLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+KV
Sbjct: 170 TKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKV 228
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 49/55 (89%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KD QS+ AK RRERI+E+L+ LQ+L+PNG+KVD+ TMLE+A+ YVKFLQLQ+K+L
Sbjct: 175 KDSQSLYAKRRRERINEKLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLL 229
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPNG+K D +ML++ I YVKFLQLQVKVL+
Sbjct: 137 DPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRL- 195
Query: 260 PVQGGKAPDISQVRE 274
GG A SQ+ E
Sbjct: 196 ---GGAASVSSQISE 207
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 51/60 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRE+I+ERL+ LQ L+PNG KVD+VTML++A+ YV+FL+ QV +L +DE+W
Sbjct: 5 DPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQVTLLKSDEYW 64
>gi|140084384|gb|ABO84936.1| Rhd6-like 7 [Physcomitrella patens]
Length = 67
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 52/60 (86%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A++RRE+I+ERLK LQ LVPNG +VD+VTMLE+AI +VKFL+ Q+++L +D+ W
Sbjct: 5 DPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLELLRSDDRW 64
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 67/119 (56%), Gaps = 18/119 (15%)
Query: 162 SSLKRPNTGDSMQA--------VKKQC---AIAATKKTNNKQKTSA---PPKDPQSIAAK 207
S + PN+G S+Q+ V Q A ++ KQK A DP SIA +
Sbjct: 161 SCFRPPNSGGSLQSNSFGAPGNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAER 220
Query: 208 NRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKA 266
RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+ GG A
Sbjct: 221 LRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL----GGAA 275
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 54/74 (72%)
Query: 182 IAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 241
IAA ++K DPQ++AA+ RRER+SERL++LQ+LVP GSK+D +ML++A S
Sbjct: 277 IAAAAAEKPRRKNVRISSDPQTVAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAAS 336
Query: 242 YVKFLQLQVKVLAT 255
Y+KFL+ QV+ L T
Sbjct: 337 YLKFLKSQVQALET 350
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 61/86 (70%), Gaps = 12/86 (13%)
Query: 193 KTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
K +A +PQS+AA++RR++ISER+++L++L+P G+K+D TML++AI YVKFLQLQV++
Sbjct: 382 KPAATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQI 441
Query: 253 LATDEF------------WPVQGGKA 266
L +D P+QG +A
Sbjct: 442 LESDTLDNAPLTASNGQNLPLQGSRA 467
>gi|356536103|ref|XP_003536579.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 352
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 159 DASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLK 218
D+S+S + G S +++ ++ K + + SA DPQS+ A+ RRERI+ERLK
Sbjct: 230 DSSASQELNGGGSSSLSLEDSTSLKLKGKKSTANRGSA--TDPQSVYARRRRERINERLK 287
Query: 219 ILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 288 ILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 328
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/63 (58%), Positives = 52/63 (82%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
KDPQS+AA++RRERIS+R+++LQ LVP G+K+D +ML++AI YVKFL+LQ++V T
Sbjct: 4 KDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQVCDTCNL 63
Query: 259 WPV 261
PV
Sbjct: 64 VPV 66
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 46/207 (22%)
Query: 91 EYSMWEGNFNQINQKYSSDHRLMEDFNCFDTASNYGFMINNSARDCHGDW--------LY 142
E+S GN N INQ SD + N + +I+N W L
Sbjct: 29 EFSSSNGNNNTINQFPPSDQQFYGTSNASNNTRPLADLIDNPPNQI--PWSSSSSFTHLP 86
Query: 143 TEATAVTDTILESGSQDA----------------SSSLKRPNTG-----------DSMQA 175
+++T T+TI + + SS+ PNT +SM A
Sbjct: 87 SQSTTNTNTIYFTNNNSTPLMFQQQQTTPLMFSNSSNEIAPNTNHYGTASPSEKRNSMAA 146
Query: 176 VKKQC-AIAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPN 226
+++ IAA + ++ PPK DPQSIAA++RRERISE+++ILQ +VP
Sbjct: 147 MREMIFRIAAMQPIYIDPESVKPPKRRNVKISKDPQSIAARHRRERISEKIRILQRMVPG 206
Query: 227 GSKVDLVTMLEKAISYVKFLQLQVKVL 253
G+K+D +ML++AI YVKFL+ Q+K L
Sbjct: 207 GTKMDTASMLDEAIHYVKFLKTQLKSL 233
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Query: 174 QAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
Q V IA+++ + S KDPQS+AA++RRERIS+R+++LQ LVP G+K+D
Sbjct: 418 QPVPSLEEIASSRPKRRNVRIS---KDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTA 474
Query: 234 TMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL+LQ++ L
Sbjct: 475 SMLDEAIHYVKFLKLQLQTL 494
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Query: 171 DSMQAVKKQC-AIAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQ 221
+SM A+++ IAA + + ++ PPK DPQS+AA++RRERISE+++ILQ
Sbjct: 116 NSMAAMREMIFRIAAMQPVHIDPESVKPPKRRNVKISKDPQSVAARHRRERISEKIRILQ 175
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 176 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 207
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 206 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL- 264
Query: 260 PVQGGKAPDISQVREAIDAILSSQRDRSSSS 290
GG A V E + ++R S+ S
Sbjct: 265 ---GGAAAVAPLVAEGGGDCIQAKRSNSNDS 292
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KDPQS+AA++RRERISER+KILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 138 KDPQSVAARHRRERISERIKILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 192
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%), Gaps = 8/80 (10%)
Query: 182 IAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
IAA + + ++ PPK DPQS+AA++RRERISER++ILQ LVP G+K+D
Sbjct: 140 IAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERMRILQRLVPGGTKMDTA 199
Query: 234 TMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL+ QV+ L
Sbjct: 200 SMLDEAIHYVKFLKKQVQSL 219
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 256 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL- 314
Query: 260 PVQGGKA 266
GG A
Sbjct: 315 ---GGAA 318
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 46 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 105
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 262 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL- 320
Query: 260 PVQGGKA 266
GG A
Sbjct: 321 ---GGAA 324
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 40 DPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 99
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 234 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL- 292
Query: 260 PVQGGKA 266
GG A
Sbjct: 293 ---GGAA 296
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 226 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSVSRL 284
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 41 DPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 100
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 113 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 172
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 161 SSSLKRPNTGDSMQ---AVKKQCAIAATKKTNNKQKTSAPPK-----DPQSIAAKNRRER 212
SS + PN SM ++ + + A + N KT + DP SIA + RRE+
Sbjct: 202 SSGIAEPNVNMSMNQLSSMPQTTSAAPVEGCNGTGKTRVRARRGHATDPHSIAERLRREK 261
Query: 213 ISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
I+ER+K LQELVPN +KVD +ML++ I YVKFLQLQVKVL+
Sbjct: 262 IAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVKVLSMSRL 307
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
Query: 170 GDSM--QAVKKQCAIAATKKTNNKQKTSAPPK------------DPQSIAAKNRRERISE 215
G SM Q+ A T + +APP+ DP SIA + RRERI+E
Sbjct: 148 GGSMSGQSFGGTAASGGTAAPASSGGGAAPPRQTRVRARRGQATDPHSIAERLRRERIAE 207
Query: 216 RLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
R+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+ G
Sbjct: 208 RMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAG 255
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRER+SERL++LQ+LVP GSK+D +ML++A SY+KFL+ QV+ L T
Sbjct: 294 DPQTVAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALET 349
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 204 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 262
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 46/54 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA+ RRER+SERL++LQ LVP GS++D +ML++A SY+KFL+ QVK L
Sbjct: 293 DPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAASYLKFLKTQVKAL 346
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 183 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL- 241
Query: 260 PVQGGKA 266
GG A
Sbjct: 242 ---GGAA 245
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 265 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL- 323
Query: 260 PVQGGKA 266
GG A
Sbjct: 324 ---GGAA 327
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRERISERL++LQ+LVP G+K+D +ML++A SY++FLQ QV+ L T
Sbjct: 323 DPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQSQVRELQT 378
>gi|297810265|ref|XP_002873016.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318853|gb|EFH49275.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 898
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
T T + TS DPQS+AA+ RR RISER KILQ +VP G+K+D V+MLE+AI YVK
Sbjct: 31 TGNTKRSRSTSTLSTDPQSVAARERRHRISERFKILQSMVPGGAKMDTVSMLEEAIRYVK 90
Query: 245 FLQLQV 250
FL+ Q+
Sbjct: 91 FLKAQI 96
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 197 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 255
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 39 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQLQVKVLSMSRL- 97
Query: 260 PVQGGKA 266
GG A
Sbjct: 98 ---GGAA 101
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 49/55 (89%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+DPQS+AA++RRERISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q+K+L
Sbjct: 122 EDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIKLL 176
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRE+I+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 145 DPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLG 204
Query: 260 PVQGGKAPDISQV 272
AP ++ +
Sbjct: 205 GAGATMAPLVADL 217
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 12/79 (15%)
Query: 188 TNNKQKTSAPPK------------DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM 235
T++ +APP+ DP SIA + RRERI+ER+K LQELVPN +K D +M
Sbjct: 189 TSSGGGGTAPPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASM 248
Query: 236 LEKAISYVKFLQLQVKVLA 254
L++ I YVKFLQLQVKVL+
Sbjct: 249 LDEIIDYVKFLQLQVKVLS 267
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%), Gaps = 8/80 (10%)
Query: 182 IAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
IAA + N T PK DPQS+AA++RRERISE+++ILQ LVP G+K+D
Sbjct: 81 IAAMQPVNIDPATIYKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTA 140
Query: 234 TMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL+ Q+++L
Sbjct: 141 SMLDEAIRYVKFLKKQIRLL 160
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 12/79 (15%)
Query: 188 TNNKQKTSAPPK------------DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM 235
T++ +APP+ DP SIA + RRERI+ER+K LQELVPN +K D +M
Sbjct: 189 TSSGGGGTAPPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASM 248
Query: 236 LEKAISYVKFLQLQVKVLA 254
L++ I YVKFLQLQVKVL+
Sbjct: 249 LDEIIDYVKFLQLQVKVLS 267
>gi|15240948|ref|NP_195751.1| aprataxin [Arabidopsis thaliana]
gi|75335734|sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic
helix-loop-helix protein 140; Short=AtbHLH140;
Short=bHLH 140; AltName: Full=Transcription factor EN
122; AltName: Full=bHLH transcription factor bHLH140
gi|7320709|emb|CAB81914.1| putative protein [Arabidopsis thaliana]
gi|332002943|gb|AED90326.1| aprataxin [Arabidopsis thaliana]
Length = 912
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
T T + TS DPQS+AA++RR RIS+R KILQ +VP G+K+D V+ML++AISYVK
Sbjct: 31 TGNTKRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVK 90
Query: 245 FLQLQV 250
FL+ Q+
Sbjct: 91 FLKAQI 96
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 47/56 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRER+SERL++LQ LVP GSK+D TML++A SY+KFL+ Q++ L T
Sbjct: 278 DPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 333
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 222 DPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 280
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
Query: 186 KKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKF 245
KK+N K S DPQS+AA+ RR RIS+R KILQ LVP G+K+D V+MLE+AI+YVKF
Sbjct: 29 KKSNGGVKLST---DPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKF 85
Query: 246 LQLQVKVLAT 255
L+ Q+ + T
Sbjct: 86 LKNQILLHQT 95
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 48/54 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQS+AA++RRERISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q+++L
Sbjct: 134 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKRQIRLL 187
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 46/55 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRE+I+ER+K LQELVPN SKVD +ML++ I YVKFLQLQVKVL+
Sbjct: 360 DPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQLQVKVLS 414
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 48/54 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQS+AA++RRERISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q+++L
Sbjct: 133 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 186
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 172 SMQAVKKQC-AIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
+MQ V+ AI A K+ N + KDPQS+AA++RRERIS++++ILQ LVP G+K+
Sbjct: 91 AMQPVEIDPEAIKAPKRRNVRIS-----KDPQSVAARHRRERISQKIRILQRLVPGGTKM 145
Query: 231 DLVTMLEKAISYVKFLQLQVKVL 253
D +ML++A+ YVKFL+ QV+ L
Sbjct: 146 DTASMLDEAVHYVKFLKRQVQTL 168
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ + YVKFLQLQVKVL+
Sbjct: 249 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRL 307
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ + YVKFLQLQVKVL+
Sbjct: 248 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRL 306
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 47/56 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRER+SERL++LQ LVP GSK+D TML++A SY+KFL+ Q++ L T
Sbjct: 234 DPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 289
>gi|357444409|ref|XP_003592482.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481530|gb|AES62733.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 157
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 47/58 (81%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPV 261
I RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L+ + P+
Sbjct: 82 IMILRRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSMWMYAPI 139
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 47/56 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRER+SERL++LQ LVP GSK+D TML++A SY+KFL+ Q++ L T
Sbjct: 304 DPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 359
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 48/54 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQS+AA++RRERISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q+++L
Sbjct: 138 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 191
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRER+S+RL++LQ+LVP GSK+D +ML++A SY+KFL+ QV+ L T
Sbjct: 287 DPQTVAARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLRSQVQALET 342
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 57/84 (67%), Gaps = 18/84 (21%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT---- 255
DPQS+AA++RRERISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q+++L +
Sbjct: 118 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAILYVKFLKRQIRLLQSTSSP 177
Query: 256 ----------DEFWPVQGGKAPDI 269
++WP AP+I
Sbjct: 178 LINCTGAAPNSDYWPF----APNI 197
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 47/56 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRER+SERL++LQ LVP GSK+D TML++A SY+KFL+ Q++ L T
Sbjct: 306 DPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALET 361
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+AA++RRERISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q++ L +
Sbjct: 127 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRFLQSTPPP 186
Query: 260 PVQG--GKAPD 268
P+ G AP+
Sbjct: 187 PINCNVGAAPN 197
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 48/54 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQS+AA++RRERISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q+++L
Sbjct: 146 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 199
>gi|242038015|ref|XP_002466402.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
gi|241920256|gb|EER93400.1| hypothetical protein SORBIDRAFT_01g007160 [Sorghum bicolor]
Length = 292
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERLKILQ+LVPNG+KVD+ TMLE+A+ YV+FLQ Q+K+L++DE W
Sbjct: 212 DPQSLYARRRRERINERLKILQKLVPNGTKVDISTMLEEAVHYVRFLQQQIKMLSSDEMW 271
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+DPQS+AA++RRERISER+++LQ LVP G+K+D +ML++AI Y+KFL+ QV+ L
Sbjct: 161 EDPQSVAARHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 215
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP 260
P SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 270 PHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL-- 327
Query: 261 VQGGKA 266
GG A
Sbjct: 328 --GGAA 331
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQ+QVKVL+
Sbjct: 205 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMSRL 263
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+MQ V A + N + + +DPQS+AA++RRERISER+++LQ LVP G+K+D
Sbjct: 138 AMQPVDIDPATVKKPRRRNVRIS----EDPQSVAARHRRERISERVRVLQRLVPGGTKMD 193
Query: 232 LVTMLEKAISYVKFLQLQVKVL 253
+ML++AI Y+KFL+ QV+ L
Sbjct: 194 TASMLDEAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+MQ V A + N + + +DPQS+AA++RRERISER+++LQ LVP G+K+D
Sbjct: 137 AMQPVDIDPATVKKPRRRNVRIS----EDPQSVAARHRRERISERVRVLQRLVPGGTKMD 192
Query: 232 LVTMLEKAISYVKFLQLQVKVL 253
+ML++AI Y+KFL+ QV+ L
Sbjct: 193 TASMLDEAIRYIKFLKRQVQEL 214
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQ+QVKVL+
Sbjct: 208 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMSRL 266
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 47/54 (87%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQSIAA+ RRERISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q+++L
Sbjct: 118 DPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 268 DPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 326
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 167 PNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK-----DPQSIAAKNRRERISERLKILQ 221
P G S + ++ Q ++ T +QK + DP SIA + RRERI+ER+K LQ
Sbjct: 71 PTMG-SQEGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQ 129
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
ELVPN +K D +ML++ I YV+FLQLQVKVL+
Sbjct: 130 ELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRL 166
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 167 PNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK-----DPQSIAAKNRRERISERLKILQ 221
P G S + ++ Q ++ T +QK + DP SIA + RRERI+ER+K LQ
Sbjct: 71 PTMG-SQEGLQAQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQ 129
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
ELVPN +K D +ML++ I YV+FLQLQVKVL+
Sbjct: 130 ELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRL 166
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 268 DPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 326
>gi|357131240|ref|XP_003567247.1| PREDICTED: transcription factor LAX PANICLE-like [Brachypodium
distachyon]
Length = 228
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 64 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTL 116
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 47/55 (85%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KDPQS+AA++RRERIS+R+++LQ VP G+K+D +ML++AI YVKFLQ Q++ L
Sbjct: 390 KDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQQQLQTL 444
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRER+S+RL++LQ+LVP GSK+D +ML++A SY+KFL+ QV+ L T
Sbjct: 284 DPQTVAARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALET 339
>gi|227016421|gb|ACP18672.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 56 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSL 108
>gi|224091579|ref|XP_002334947.1| predicted protein [Populus trichocarpa]
gi|222875273|gb|EEF12404.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
DPQS+AA+ RR RIS+R KILQ LVP G+K+D V+MLE+AI+YVKFL+ QV
Sbjct: 40 DPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKTQV 90
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 45/54 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA+ RRER+SERL++LQ LVP GS++D +ML++A Y+KFL+ QVK L
Sbjct: 288 DPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKAL 341
>gi|227016419|gb|ACP18671.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 211
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 56 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSL 108
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 44/54 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DP SIA + RRERI+ER+K LQELVP+ +K D +ML++ I YVKFLQLQVKVL
Sbjct: 173 DPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVL 226
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 45/54 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA+ RRER+SERL++LQ LVP GS++D +ML++A Y+KFL+ QVK L
Sbjct: 289 DPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKFLKSQVKAL 342
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 47/56 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRERISERL++LQ LVP G+K+D +ML++A SY++FL+ Q++ L T
Sbjct: 341 DPQTVAARQRRERISERLRVLQRLVPGGAKMDTASMLDEAASYLRFLKAQIRDLQT 396
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 176 VKKQCAIAATKKTNNKQKTSA---PPKDPQSIAAKNRRERISERLKILQELVPNGSKVDL 232
V+ Q A N K +T A DP SIA + RRE+ISER+K LQ+LVPN +K D
Sbjct: 297 VEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADK 356
Query: 233 VTMLEKAISYVKFLQLQVKVLATDEF 258
+ML++ I YVKFLQLQVKVL+
Sbjct: 357 ASMLDEIIDYVKFLQLQVKVLSMSRL 382
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+MQ V+ A K N + + DPQS+AA+ RRERISE+++ILQ LVP G K+D
Sbjct: 89 AMQPVEIDPATIRKPKRRNVRISD----DPQSVAARLRRERISEKIRILQRLVPGGRKMD 144
Query: 232 LVTMLEKAISYVKFLQLQVKVL 253
+MLE+AI YVKFL+ Q+++L
Sbjct: 145 TASMLEEAIRYVKFLKRQIRLL 166
>gi|227016424|gb|ACP18673.1| barren stalk1-like protein [Leymus triticoides]
Length = 158
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 55 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSL 107
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRE+ISER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 330 DPHSIAERLRREKISERMKNLQELVPNSNKADKSSMLDEIIDYVKFLQLQVKVLS 384
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 47/54 (87%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQS+AA++RRERISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q++ L
Sbjct: 34 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRQL 87
>gi|115440839|ref|NP_001044699.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|68565366|sp|Q7XAQ6.1|LAX_ORYSJ RecName: Full=Transcription factor LAX PANICLE
gi|33342172|dbj|BAC80247.1| transcription factor [Oryza sativa Japonica Group]
gi|56785174|dbj|BAD81850.1| transcription factor [Oryza sativa Japonica Group]
gi|113534230|dbj|BAF06613.1| Os01g0831000 [Oryza sativa Japonica Group]
gi|342674132|gb|AEL31274.1| LAX protein [Oryza sativa Japonica Group]
Length = 215
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 43 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTL 95
>gi|62466473|gb|AAX83562.1| LAX [Oryza barthii]
gi|62466475|gb|AAX83563.1| LAX [Oryza meridionalis]
gi|62466477|gb|AAX83564.1| LAX [Oryza longistaminata]
gi|62466479|gb|AAX83565.1| LAX [Oryza glumipatula]
gi|62466481|gb|AAX83566.1| LAX [Oryza nivara]
gi|62466483|gb|AAX83567.1| LAX [Oryza rufipogon]
gi|62466485|gb|AAX83568.1| LAX [Oryza sativa Japonica Group]
gi|62466487|gb|AAX83569.1| LAX [Oryza sativa Japonica Group]
gi|62466489|gb|AAX83570.1| LAX [Oryza sativa Japonica Group]
gi|62466493|gb|AAX83572.1| LAX [Oryza sativa Japonica Group]
gi|62466495|gb|AAX83573.1| LAX [Oryza sativa Indica Group]
gi|62466497|gb|AAX83574.1| LAX [Oryza sativa Indica Group]
gi|62466501|gb|AAX83576.1| LAX [Oryza sativa Indica Group]
gi|62466511|gb|AAX83581.1| LAX [Oryza sativa Indica Group]
gi|62466517|gb|AAX83584.1| LAX [Oryza rufipogon]
Length = 189
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 27 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTL 79
>gi|62466521|gb|AAX83586.1| LAX [Oryza rufipogon]
Length = 190
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 27 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTL 79
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+MQ V A + N + + +DPQS+ A++RRERISER+++LQ LVP G+K+D
Sbjct: 138 AMQPVDIDPATVKKPRRRNVRIS----EDPQSVVARHRRERISERVRVLQRLVPGGTKMD 193
Query: 232 LVTMLEKAISYVKFLQLQVKVL 253
+ML++AI Y+KFL+ QV+ L
Sbjct: 194 TASMLDEAIRYIKFLKRQVQEL 215
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 49/58 (84%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE 257
DPQS+AA++RRERISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q++ L ++
Sbjct: 97 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRQLQSNH 154
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVP+ +K D +ML++ I YVKFLQ+QVKVL+
Sbjct: 153 DPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQVQVKVLSMSRL 211
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRE+I+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 305 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVLSMSRL 363
>gi|62466519|gb|AAX83585.1| LAX [Oryza rufipogon]
Length = 189
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 27 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTL 79
>gi|227016415|gb|ACP18669.1| barren stalk1-like protein [Leymus cinereus]
Length = 149
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 56 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSL 108
>gi|62466491|gb|AAX83571.1| LAX [Oryza sativa Japonica Group]
gi|62466499|gb|AAX83575.1| LAX [Oryza sativa Indica Group]
gi|62466503|gb|AAX83577.1| LAX [Oryza sativa Indica Group]
gi|62466505|gb|AAX83578.1| LAX [Oryza sativa Indica Group]
gi|62466507|gb|AAX83579.1| LAX [Oryza sativa Indica Group]
gi|62466509|gb|AAX83580.1| LAX [Oryza sativa Indica Group]
gi|62466513|gb|AAX83582.1| LAX [Oryza rufipogon]
gi|62466515|gb|AAX83583.1| LAX [Oryza rufipogon]
Length = 189
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 27 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTL 79
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 48/54 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA++RRERISE++++LQ+LVP GSK+D +ML++A +Y+KFL+ QVK L
Sbjct: 341 DPQTVAARHRRERISEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 394
>gi|62466523|gb|AAX83587.1| LAX [Oryza rufipogon]
Length = 189
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 27 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTL 79
>gi|356574313|ref|XP_003555293.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 353
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 159 DASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLK 218
D+++S + G S +++ ++ K + + SA DPQS+ A+ RRERI+ERL+
Sbjct: 231 DSNASQELNGGGSSSLSLEDSTSLKLKGKKSTANRGSA--TDPQSVYARRRRERINERLR 288
Query: 219 ILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 289 ILQHLVPNGTKVDISTMLEEAVKYVKFLQLQIKLLSSDDLW 329
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRER+S+RL++LQ+LVP G+K+D +ML++A SY+KFL+ QV+ L T
Sbjct: 285 DPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLET 340
>gi|414881477|tpg|DAA58608.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 481
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRERIS+RL++LQ+LVP G+K+D +ML++A SY++FL+ QV+ L T
Sbjct: 375 DPQTVAARQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRDLQT 430
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRERIS+RL++LQ+LVP G+K+D +ML++A SY++FL+ QV+ L T
Sbjct: 321 DPQTVAARQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQVRDLQT 376
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRE+I+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 158 DPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVLSMSRL 216
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRER+S+RL++LQ+LVP G+K+D +ML++A SY+KFL+ QV+ L T
Sbjct: 284 DPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLET 339
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 47/54 (87%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DP S+AA++RRERISE+++ILQ LVP G+K+D +ML++AI YVKFL+ Q+++L
Sbjct: 102 DPASVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 155
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRERISERL++LQ+LVP G+K+D +ML++A +Y++FL+ QV+ L T
Sbjct: 356 DPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQVRELQT 411
>gi|147768917|emb|CAN66981.1| hypothetical protein VITISV_004454 [Vitis vinifera]
Length = 282
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 16/99 (16%)
Query: 171 DSMQAVKKQC-AIAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQ 221
+SM A+++ IAA + + ++ PPK DPQS+AA++RRERISE+++ILQ
Sbjct: 69 NSMAAMREMIFRIAAMQPVHIDPESVKPPKRRNVKISKDPQSVAARHRRERISEKIRILQ 128
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP 260
LVP G+K+D +ML++AI YV FL+ Q + WP
Sbjct: 129 RLVPGGTKMDTASMLDEAIHYVXFLKTQTE-------WP 160
>gi|162459126|ref|NP_001105271.1| barren stalk1 [Zea mays]
gi|56384213|gb|AAV85767.1| barren stalk1 [Zea mays]
gi|56384215|gb|AAV85768.1| barren stalk1 [Zea mays]
gi|223946525|gb|ACN27346.1| unknown [Zea mays]
gi|414879869|tpg|DAA57000.1| TPA: barren stalk1 [Zea mays]
Length = 219
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ Q+ +
Sbjct: 55 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKTQISL 107
>gi|242059137|ref|XP_002458714.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
gi|241930689|gb|EES03834.1| hypothetical protein SORBIDRAFT_03g038820 [Sorghum bicolor]
Length = 232
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ Q+ +
Sbjct: 60 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQISL 112
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 44/51 (86%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
DPQS+ A+ RRE+I+ERL+ LQ L+PNG KVD+VTML++A+ YV+FL+ QV
Sbjct: 456 DPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQV 506
>gi|147838921|emb|CAN77067.1| hypothetical protein VITISV_022410 [Vitis vinifera]
gi|297735648|emb|CBI18142.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
DPQS+AA+ RR RIS+R KILQ LVP G+K+D V+MLE+AI YVK+L+ Q+
Sbjct: 39 DPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAIHYVKYLKTQI 89
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQ+LVPN +K D +ML++ + YVKFLQLQVKVL+
Sbjct: 13 DPHSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRL 71
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 44/54 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DP SIA + RRE+ISER+K LQ+LVPN +K D +ML++ I YVKFLQLQVKVL
Sbjct: 328 DPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQLQVKVL 381
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 176 VKKQCAIAATKKTNNKQKTSA---PPKDPQSIAAKNRRERISERLKILQELVPNGSKVDL 232
V+ Q A N K +T A DP SIA + RRE+ISER+K LQ LVPN +K D
Sbjct: 298 VEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADK 357
Query: 233 VTMLEKAISYVKFLQLQVKVLATDEF 258
+ML++ I YVKFLQLQVKVL+
Sbjct: 358 ASMLDEIIDYVKFLQLQVKVLSMSRL 383
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 176 VKKQCAIAATKKTNNKQKTSA---PPKDPQSIAAKNRRERISERLKILQELVPNGSKVDL 232
V+ Q A N K +T A DP SIA + RRE+ISER+K LQ LVPN +K D
Sbjct: 298 VEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADK 357
Query: 233 VTMLEKAISYVKFLQLQVKVLATDEF 258
+ML++ I YVKFLQLQVKVL+
Sbjct: 358 ASMLDEIIDYVKFLQLQVKVLSMSRL 383
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 176 VKKQCAIAATKKTNNKQKTSA---PPKDPQSIAAKNRRERISERLKILQELVPNGSKVDL 232
V+ Q A N K +T A DP SIA + RRE+ISER+K LQ LVPN +K D
Sbjct: 298 VEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADK 357
Query: 233 VTMLEKAISYVKFLQLQVKVLATDEF 258
+ML++ I YVKFLQLQVKVL+
Sbjct: 358 ASMLDEIIDYVKFLQLQVKVLSMSRL 383
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/61 (55%), Positives = 51/61 (83%)
Query: 191 KQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
K++ KDPQS+AA++RRERIS+R+++LQ LVP G+K+D +ML++AI YVKFL+LQ+
Sbjct: 26 KRRNVRISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQL 85
Query: 251 K 251
+
Sbjct: 86 Q 86
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRE+ISER+K LQ+LVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 329 DPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQLQVKVLS 383
>gi|449461799|ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
gi|449532778|ref|XP_004173357.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 195
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
DPQS+AA+ RR RIS+R KILQ LVP G+K+D V+ML++AI YVKFL+ Q+
Sbjct: 51 DPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQI 101
>gi|326527333|dbj|BAK04608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 56 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDNVSMLEQAIHYVKFLKAQVSL 108
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 6/68 (8%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL------ 253
DP SIA + RRE+IS+R+K LQELVPN +K D +MLE+ I Y+KFLQLQ KVL
Sbjct: 291 DPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQLQTKVLSMSRLG 350
Query: 254 ATDEFWPV 261
ATD P+
Sbjct: 351 ATDALVPL 358
>gi|357506069|ref|XP_003623323.1| LAX [Medicago truncatula]
gi|355498338|gb|AES79541.1| LAX [Medicago truncatula]
Length = 153
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
DPQS+AA+ RR RIS+R KILQ ++P GSK+D V+MLE+AI YVKFL+ Q+
Sbjct: 35 DPQSVAARERRHRISDRFKILQSMIPGGSKLDTVSMLEEAIHYVKFLKKQI 85
>gi|125528258|gb|EAY76372.1| hypothetical protein OsI_04303 [Oryza sativa Indica Group]
Length = 223
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK++ V+MLE+AI YVKFL+ QV +
Sbjct: 51 DPQSVAARERRHRISDRFRVLRSLVPGGSKMETVSMLEQAIHYVKFLKAQVTL 103
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 48/54 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA++RRERI+E++++LQ+LVP GSK+D +ML++A +Y+KFL+ QVK L
Sbjct: 343 DPQTVAARHRRERINEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 396
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 176 VKKQCAIAATKKTNNKQKTSA---PPKDPQSIAAKNRRERISERLKILQELVPNGSKVDL 232
V+ Q A N K +T A DP SIA + RRE+ISER+K LQ LVPN +K D
Sbjct: 221 VEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADK 280
Query: 233 VTMLEKAISYVKFLQLQVKVLATDEF 258
+ML++ I YVKFLQLQVKVL+
Sbjct: 281 ASMLDEIIDYVKFLQLQVKVLSMSRL 306
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRERISERL++LQ+LVP G+K+D +ML++A +Y++FL+ Q++ L T
Sbjct: 385 DPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 440
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRERISERL++LQ+LVP G+K+D +ML++A +Y++FL+ Q++ L T
Sbjct: 373 DPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 428
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 53/63 (84%)
Query: 193 KTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
K A +PQS+AA++RR++ISER+++L++L+P G+K+D TML++AI YVKFLQLQV++
Sbjct: 10 KPVATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQI 69
Query: 253 LAT 255
L +
Sbjct: 70 LES 72
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRERISERL++LQ+LVP G+K+D +ML++A +Y++FL+ Q++ L T
Sbjct: 369 DPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 424
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 48/56 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRERISERL++LQ+LVP G+K+D +ML++A +Y++FL+ Q++ L T
Sbjct: 373 DPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQT 428
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVK 251
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVK
Sbjct: 168 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 219
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRE+IS+R+K LQ+LVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 329 DPHSIAERLRREKISDRMKSLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLS 383
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRE+IS+R+K LQELVPN ++ D +ML++ I YVKFLQLQVKVL+
Sbjct: 307 DPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQLQVKVLSMSRL 365
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%)
Query: 191 KQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
K+K DPQ++AA+ RRERISE++++LQ LVP G+K+D +ML++A +Y+KFL+ QV
Sbjct: 271 KRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQV 330
Query: 251 KVL 253
K L
Sbjct: 331 KAL 333
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRERI+ER++ LQELVPN +K D ML++ + YVKFL+LQVKVL+
Sbjct: 133 DPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 187
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 46/54 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA+ RRERISE++++LQ LVP G+K+D +ML++A +Y+KFL+ QVK L
Sbjct: 278 DPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRERI+ER++ LQELVPN +K D ML++ + YVKFL+LQVKVL+
Sbjct: 131 DPHSIAERLRRERIAERMRALQELVPNTNKTDRAVMLDEILDYVKFLRLQVKVLS 185
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 46/54 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA+ RRERIS+R+++LQ +VP GSK+D +ML++A +Y+KFL+ QVK L
Sbjct: 207 DPQTVAARQRRERISDRIRVLQGMVPGGSKMDTASMLDEAANYLKFLRSQVKAL 260
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
Query: 180 CAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKA 239
C + K N + +S DPQ++AA++RRERIS +++ILQ LVP G+K+D +ML++A
Sbjct: 276 CLGGSKPKRRNVRISS----DPQTVAARHRRERISTKIRILQRLVPGGTKMDTASMLDEA 331
Query: 240 ISYVKFLQLQVKVL 253
I YVK+L+ QV+ +
Sbjct: 332 IHYVKYLKSQVQAM 345
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRE+IS+R+K LQ+LVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 329 DPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLS 383
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 47/54 (87%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA+ RRERIS+R+++LQ++VP GSK+D +ML++A +Y+KFL+ QVK L
Sbjct: 394 DPQTVAARQRRERISDRIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVKAL 447
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DP SIA + RRERI+ER++ LQELVPN +K D ML++ + YVKFL+LQVKVL
Sbjct: 125 DPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 178
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRE+IS+R+K LQ+LVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 329 DPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLS 383
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRE+IS+R+K LQ+LVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 326 DPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLS 380
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 178 DPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 236
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRERI+ER++ LQELVPN +K D ML++ + YVKFL+LQVKVL+
Sbjct: 124 DPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 178
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRERI+ER++ LQELVPN +K D ML++ + YVKFL+LQVKVL+
Sbjct: 142 DPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 196
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQV
Sbjct: 248 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQV 298
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRERI+ER++ LQELVPN +K D ML++ + YVKFL+LQVKVL+
Sbjct: 142 DPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 196
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 46/54 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA+ RRERISE++++LQ LVP G+K+D +ML++A +Y+KFL+ QVK L
Sbjct: 307 DPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 360
>gi|449458249|ref|XP_004146860.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
K+PQ++AA+ RRE+ISE++++LQ LVP GSK+D+ +ML++A SY+KFL+ Q+K L
Sbjct: 190 KEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQIKAL 244
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRERI+ER++ LQELVPN +K D ML++ + YVKFL+LQVKVL+
Sbjct: 142 DPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 196
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRERI+ER++ LQELVPN +K D ML++ + YVKFL+LQVKVL+
Sbjct: 135 DPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 189
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRE+IS+R+K LQ+LVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 291 DPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKVLS 345
>gi|449476926|ref|XP_004154878.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
K+PQ++AA+ RRE+ISE++++LQ LVP GSK+D+ +ML++A SY+KFL+ Q+K L
Sbjct: 190 KEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQIKAL 244
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 160 DPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 218
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRE+IS+R+K LQELVPN +K + +ML++ I YVKFLQLQVKVL+
Sbjct: 323 DPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVLS 377
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 184 DPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 242
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER++ LQELVPN +K D ML++ + YVKFL+LQVKVL+
Sbjct: 33 DPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRL 91
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRE+IS+R+K LQELVPN +K + +ML++ I YVKFLQLQVKVL+
Sbjct: 323 DPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVLSMSRL 381
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 45/54 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA+ RRERISE++++LQ LVP G+K+D +ML++A +Y KFL+ QVK L
Sbjct: 278 DPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYFKFLRAQVKAL 331
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 169 TGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGS 228
T + + Q AI + Q T DP SIA + RRERISER+K LQELVPN +
Sbjct: 117 TSSTTVTIPHQPAIHPRVRARRGQAT-----DPHSIAERLRRERISERIKALQELVPNCN 171
Query: 229 KVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
K D ++++ + YVKFL+LQVKVL+
Sbjct: 172 KTDRAALVDEILDYVKFLRLQVKVLSMSRL 201
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQS+AA+ RRERISE+++ILQ LVP G K+D +ML++AI YVKFL+ Q++ L
Sbjct: 43 DPQSVAARLRRERISEKIRILQRLVPGGRKMDTASMLDEAIRYVKFLKRQIRSL 96
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Query: 180 CAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKA 239
C + K N + +S DPQ++AA++RRERIS +++ILQ LVP G+K+D +ML++A
Sbjct: 277 CLGGSKPKRRNVRISS----DPQTVAARHRRERISTKIRILQRLVPGGTKMDTASMLDEA 332
Query: 240 ISYVKFLQLQVKVLATDE 257
I YVK+L+ QV+ + E
Sbjct: 333 IHYVKYLKSQVQAMEMLE 350
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 108 DPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 166
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERISER+K LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 151 DPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKVLSMSRL 209
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERISER+K LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 150 DPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKVLSMSRL 208
>gi|288901043|gb|ADC68234.1| bHLH transcription factor [Brassica oleracea]
Length = 180
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
Query: 179 QCAIAATKKTNNKQKTSAPP--------KDPQSIAAKNRRERISERLKILQELVPNGSKV 230
Q AIAA + + T P +DPQ++ A+ RRERISE+++IL+ +VP G+K+
Sbjct: 74 QYAIAAMQPVDIDPATVPKPNRRNVRVSEDPQTVVARRRRERISEKIRILKRMVPGGAKM 133
Query: 231 DLVTMLEKAISYVKFLQLQVKVL 253
D +ML++AI Y KFL+ QV++L
Sbjct: 134 DTASMLDEAIRYTKFLKRQVRLL 156
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 48/54 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+PQSIAA+ RR++ISER++ L++LVP G+K+D +ML++AI +VKFLQ+QV++L
Sbjct: 387 EPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLL 440
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 48/54 (88%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+PQSIAA+ RR++ISER++ L++LVP G+K+D +ML++AI +VKFLQ+QV++L
Sbjct: 387 EPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLL 440
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQV
Sbjct: 259 DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQV 309
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 168 NTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNG 227
NTG ++ A+ + + + Q T DP SIA + RRERI+ER+K LQELVP+
Sbjct: 140 NTG-TVAAIPQPPQVRPRVRARRGQAT-----DPHSIAERLRRERIAERMKALQELVPSC 193
Query: 228 SKVDLVTMLEKAISYVKFLQLQVKVLA 254
+K D ML++ + YVKFL+LQVKVL+
Sbjct: 194 NKTDRAAMLDEIVDYVKFLRLQVKVLS 220
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 44/55 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRERI+ER++ LQ+LVPN +K D ML++ + YVKFL+LQVKVL+
Sbjct: 141 DPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 195
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 8/85 (9%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV---LATD 256
D QS+AA++RRERIS+R+++LQ LVP G+K+D +ML++AI Y+KFL+ Q++ L D
Sbjct: 372 DTQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYIKFLKQQLQTLEQLGID 431
Query: 257 EFWP----VQGGKAPDI-SQVREAI 276
P ++GG+A + S VR A
Sbjct: 432 GCDPGDVALRGGEALQLSSSVRPAF 456
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 178 DPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 236
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER++ LQ+LVPN +K D ML++ + YVKFL+LQVKVL+
Sbjct: 190 DPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRL 248
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DP SIA + RRE+IS+R+K LQELVPN ++ D +ML++ I YVKFLQLQVKV
Sbjct: 307 DPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQLQVKV 359
>gi|218193803|gb|EEC76230.1| hypothetical protein OsI_13645 [Oryza sativa Indica Group]
Length = 291
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 52/68 (76%), Gaps = 10/68 (14%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV--------- 252
QS+ A+ RRERI+ RL+ILQ+LVPNG+KVD+ TMLE+A+ YVKFLQLQ+KV
Sbjct: 202 QSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVEVQIVCHDQ 261
Query: 253 -LATDEFW 259
L++DE W
Sbjct: 262 MLSSDELW 269
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 175 DPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 233
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 67 DPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 125
>gi|17027282|gb|AAL34136.1|AC090713_23 putative transcription factor [Oryza sativa Japonica Group]
gi|108711234|gb|ABF99029.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|125588017|gb|EAZ28681.1| hypothetical protein OsJ_12693 [Oryza sativa Japonica Group]
Length = 310
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 52/68 (76%), Gaps = 10/68 (14%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV--------- 252
QS+ A+ RRERI+ RL+ILQ+LVPNG+KVD+ TMLE+A+ YVKFLQLQ+KV
Sbjct: 221 QSLYARRRRERINGRLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVEVQIVCHDQ 280
Query: 253 -LATDEFW 259
L++DE W
Sbjct: 281 MLSSDELW 288
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 188 TNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQ 247
T++ +APP+ + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQ
Sbjct: 138 TSSGGGGTAPPRQ-----QRLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQ 192
Query: 248 LQVKVLATDEF 258
LQVKVL+
Sbjct: 193 LQVKVLSMSRL 203
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 45/55 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRE+IS+R+K LQ+LVPN +K D +ML++ I +VKFLQLQVKVL+
Sbjct: 329 DPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDHVKFLQLQVKVLS 383
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER+K LQELVP +K D M+++ + YVKFL+LQVKVL+
Sbjct: 172 DPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYVKFLRLQVKVLSMSRL 230
>gi|15236714|ref|NP_191923.1| transcription factor IND [Arabidopsis thaliana]
gi|209572742|sp|O81313.3|IND_ARATH RecName: Full=Transcription factor IND; AltName: Full=Basic
helix-loop-helix protein 40; Short=AtbHLH40; Short=bHLH
40; AltName: Full=Protein INDEHISCENT; AltName:
Full=Transcription factor EN 120; AltName: Full=bHLH
transcription factor bHLH040
gi|3193315|gb|AAC19297.1| contains similarity to transcriptional activator Ra [Arabidopsis
thaliana]
gi|7267099|emb|CAB80770.1| hypothetical protein [Arabidopsis thaliana]
gi|117958473|gb|ABK59672.1| At4g00120 [Arabidopsis thaliana]
gi|332656425|gb|AEE81825.1| transcription factor IND [Arabidopsis thaliana]
Length = 198
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 45/54 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++ A+ RRERISE+++IL+ +VP G+K+D +ML++AI Y KFL+ QV++L
Sbjct: 121 DPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 174
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 44/59 (74%)
Query: 196 APPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+PP S+ RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 239 SPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 297
>gi|288901045|gb|ADC68235.1| bHLH transcription factor [Brassica rapa subsp. pekinensis]
Length = 171
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 8/84 (9%)
Query: 177 KKQCAIAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGS 228
K Q AIAA + + T P DPQ++ A+ RRERISE+++IL+ +VP G+
Sbjct: 75 KMQYAIAAMQPVDLDPATVPKPNRRNVRVSDDPQTVVARRRRERISEKIRILKRMVPGGA 134
Query: 229 KVDLVTMLEKAISYVKFLQLQVKV 252
K+D +ML++AI Y KFL+ QV++
Sbjct: 135 KMDTASMLDEAIRYTKFLKRQVRL 158
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 44/59 (74%)
Query: 196 APPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+PP S+ RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 238 SPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 296
>gi|297810171|ref|XP_002872969.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
gi|297318806|gb|EFH49228.1| EDA33 [Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 45/54 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++ A+ RRERISE+++IL+ +VP G+K+D +ML++AI Y KFL+ QV++L
Sbjct: 120 DPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 173
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 44/59 (74%)
Query: 196 APPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+PP S+ RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+
Sbjct: 239 SPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 297
>gi|237692500|gb|ACR15952.1| INDEHISCENT [Lepidium campestre]
gi|342298436|emb|CBY05408.1| INDEHISCENT-like protein [Lepidium campestre]
Length = 176
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 45/54 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++ A+ RRERISE+++IL+ +VP G+K+D +ML++AI Y KFL+ QV++L
Sbjct: 98 DPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 151
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 44/55 (80%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRERI+ER++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 189 DPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYVKFLRLQVKVLS 243
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 42/50 (84%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 249
DPQ++AA+ RRE++SERL+ LQ LVP GSK+D +ML++A SY+KFL+ Q
Sbjct: 303 DPQTVAARLRREKVSERLRALQRLVPGGSKMDTASMLDEAASYLKFLKSQ 352
>gi|51090503|dbj|BAD35705.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 211
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 44/54 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+PQS+AA+ RRER+S+R++ LQ LVP G+++D +MLE+AI YVKFL+ V+ L
Sbjct: 123 EPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSL 176
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK---VDLVTMLEKAISYVKFLQLQVK 251
DP SIA + RRERI+ER+K LQELVPN +K D +ML++ I YVKFLQLQVK
Sbjct: 247 DPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQLQVK 301
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 3/55 (5%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV---DLVTMLEKAISYVKFLQLQVK 251
DP SIA + RRERI+ER+K LQELVPN +K+ D +ML++ I YVKFLQLQVK
Sbjct: 259 DPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQVK 313
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
DPQSIAA+ RRE+ ++R++ILQ LVPNG ++D V ML + YV+FLQ +V
Sbjct: 684 DPQSIAARTRREKFTDRIRILQSLVPNGERLDTVHMLSQTFEYVRFLQHKV 734
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 169 TGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGS 228
T ++ AV + I + Q T DP SIA + RR RI+ER+K LQELVP +
Sbjct: 3 TSGAVSAVPQPPGIRPRVRARRGQAT-----DPHSIAERLRRVRITERVKALQELVPTCN 57
Query: 229 KVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
K D ML++ + YVKFL+LQVKVL+
Sbjct: 58 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRL 87
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
DP SIA + RRERI+ER+K LQELV N +K D +ML++ I YVKFLQLQV
Sbjct: 154 DPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQV 204
>gi|125554507|gb|EAZ00113.1| hypothetical protein OsI_22119 [Oryza sativa Indica Group]
Length = 201
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 44/54 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+PQS+AA+ RRER+S+R++ LQ LVP G+++D +MLE+AI YVKFL+ V+ L
Sbjct: 124 EPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSL 177
>gi|168017686|ref|XP_001761378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687384|gb|EDQ73767.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 41/47 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKF 245
KDPQS+AA++RRERIS+R+++LQ VP G+K+D +ML++AI YVKF
Sbjct: 370 KDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKF 416
>gi|168042091|ref|XP_001773523.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675225|gb|EDQ61723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 706
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 187 KTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKF 245
+T K++ DPQS+AA++RRERIS+R+++LQ VP G+K+D +ML++AI YVKF
Sbjct: 500 QTRPKRRNVRISSDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKF 558
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
DP SIA + RRERI+ER+K LQELV N +K D +ML++ I YVKFLQLQV
Sbjct: 126 DPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQV 176
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 162 SSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQ 221
++ K PN + QA+ A Q PP + RRERI+ER+K LQ
Sbjct: 105 AAFKSPNAAGADQALYNGFGAAGMHAAAVHQ----PP------FGQLRRERIAERMKALQ 154
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKA 266
ELVPN +K D +ML++ I YVKFLQLQVKVL+ GG A
Sbjct: 155 ELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL----GGAA 195
>gi|168057236|ref|XP_001780622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667988|gb|EDQ54605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 835
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
DPQSIAA+ RRE+ ++R++ILQ LVPNG ++D V ML + YV+FLQ +V
Sbjct: 683 DPQSIAARTRREKFTDRIRILQGLVPNGERLDTVHMLSQTFEYVRFLQHKV 733
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RR RI+ER+K LQELVP +K D ML++ + YVKFL+LQ+KVL+
Sbjct: 25 DPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLRLQIKVLSMSRL 83
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 6/56 (10%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV------DLVTMLEKAISYVKFLQLQ 249
DP SIA + RRERI+ER+K LQELVPN +KV D +ML++ I YVKFLQLQ
Sbjct: 294 DPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVKFLQLQ 349
>gi|342298424|emb|CBY05402.1| INDEHISCENT-like protein [Lepidium appelianum]
Length = 172
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 9/92 (9%)
Query: 171 DSMQAVKK-QCAIAATKKTNNKQKTSAPP--------KDPQSIAAKNRRERISERLKILQ 221
+ M A+K+ Q IAA + + T P DPQ+ A+ RRERISE+++IL+
Sbjct: 56 EDMDAMKEMQYMIAAMQPVDIDPATVPKPYRRNVRISDDPQTGVARRRRERISEKIRILK 115
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+VP G+K+D +ML++AI Y KFL+ QV++L
Sbjct: 116 RIVPGGAKMDSASMLDEAIRYTKFLKRQVRML 147
>gi|342298444|emb|CBY05412.1| INDEHISCENT-like protein [Aethionema carneum]
Length = 176
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 44/54 (81%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++ A RRERISE+++IL+ +VP G+K+D +ML++AI Y KFL+ QV++L
Sbjct: 98 DPQTVVAXRRRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLKRQVRML 151
>gi|227016417|gb|ACP18670.1| barren stalk1-like protein [Leymus cinereus x Leymus triticoides]
Length = 99
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 38/45 (84%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVK
Sbjct: 55 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVK 99
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 44/52 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
++ + RR+RI+E+++ LQEL+PN +K+D +MLE+AI Y+K LQLQV++++T
Sbjct: 331 MSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMST 382
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 44/52 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
++ + RR+RI+E+++ LQEL+PN +K+D +MLE+AI Y+K LQLQV++++T
Sbjct: 331 MSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMST 382
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 44/52 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
++ + RR+RI+E+++ LQEL+PN +K+D +MLE+AI Y+K LQLQV++++T
Sbjct: 335 MSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMST 386
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Query: 174 QAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
++V + A A T +K+ +A + +++ + RR+RI+E+++ LQEL+PN +KVD
Sbjct: 445 ESVGGKKAAPARGGTGSKRSRAA---EVHNLSERRRRDRINEKMRALQELIPNCNKVDKA 501
Query: 234 TMLEKAISYVKFLQLQVKVLA 254
+ML++AI Y+K LQLQV++++
Sbjct: 502 SMLDEAIEYLKTLQLQVQIMS 522
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 378 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 428
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 378
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 378
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 378
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 378
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 328 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 378
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 442 LSERKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 492
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 56/84 (66%), Gaps = 8/84 (9%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
D + V ++ A ++K++ + +++ + RR+RI+E+++ LQEL+PN +K+
Sbjct: 317 DELAGVHRRSAARSSKRSRTAEV--------HNLSERRRRDRINEKMRALQELIPNCNKI 368
Query: 231 DLVTMLEKAISYVKFLQLQVKVLA 254
D +MLE+AI Y+K LQLQV++++
Sbjct: 369 DKASMLEEAIEYLKTLQLQVQMMS 392
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 56/84 (66%), Gaps = 8/84 (9%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
D + V ++ A ++K++ + +++ + RR+RI+E+++ LQEL+PN +K+
Sbjct: 196 DELAGVHRRSAARSSKRSRTAEV--------HNLSERRRRDRINEKMRALQELIPNCNKI 247
Query: 231 DLVTMLEKAISYVKFLQLQVKVLA 254
D +MLE+AI Y+K LQLQV++++
Sbjct: 248 DKASMLEEAIEYLKTLQLQVQMMS 271
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 56/84 (66%), Gaps = 8/84 (9%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
D + V ++ A ++K++ + +++ + RR+RI+E+++ LQEL+PN +K+
Sbjct: 317 DELAGVHRRSAARSSKRSRTAEV--------HNLSERRRRDRINEKMRALQELIPNCNKI 368
Query: 231 DLVTMLEKAISYVKFLQLQVKVLA 254
D +MLE+AI Y+K LQLQV++++
Sbjct: 369 DKASMLEEAIEYLKTLQLQVQMMS 392
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 464 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 514
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 44/53 (83%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 467 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 519
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 333 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 383
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 56/84 (66%), Gaps = 8/84 (9%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
D + V ++ A ++K++ + +++ + RR+RI+E+++ LQEL+PN +K+
Sbjct: 101 DELAGVHRRSAARSSKRSRTAEV--------HNLSERRRRDRINEKMRALQELIPNCNKI 152
Query: 231 DLVTMLEKAISYVKFLQLQVKVLA 254
D +MLE+AI Y+K LQLQV++++
Sbjct: 153 DKASMLEEAIEYLKTLQLQVQMMS 176
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 454 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 504
>gi|357482887|ref|XP_003611730.1| Transcription factor HEC2 [Medicago truncatula]
gi|355513065|gb|AES94688.1| Transcription factor HEC2 [Medicago truncatula]
Length = 247
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 74/114 (64%), Gaps = 10/114 (8%)
Query: 149 TDTILESGSQDASSSLKRPNTGDSMQAVKKQC-AIAATKKTNNKQKTSAPPK-------- 199
T + SG ++ +SSL P +SM A+++ +A + N +T PPK
Sbjct: 87 VQTQIPSG-RNNNSSLSYPEKKNSMSAMREMIFRMAVMQPINIDPETIKPPKRKNVKISK 145
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 146 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 199
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 462 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMS 512
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 469 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 519
>gi|315175251|gb|ADT82844.1| barren stalk1/lax panicle1 [Miscanthus sinensis]
Length = 162
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 37/45 (82%)
Query: 208 NRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
+RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ Q+ +
Sbjct: 1 DRRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQISL 45
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMS 400
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 475 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMS 525
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMS 400
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 42/49 (85%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
+ RR+RI+E+++ LQEL+PN +K+D +MLE+AI Y+K LQLQV+++++
Sbjct: 279 RRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSS 327
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 9/84 (10%)
Query: 191 KQKTSAPPK-----DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKF 245
++ T AP + D + + + RR+RI+E+L+ LQEL+PN +K D V+ML++AI Y+K
Sbjct: 9 RRSTPAPTRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKS 68
Query: 246 LQLQVKVLATDEFWPVQGGKAPDI 269
LQLQ+++L + GG AP +
Sbjct: 69 LQLQLQMLVMGK----GGGMAPVV 88
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 348 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMS 398
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE-FWPVQ 262
++ K RR+RI+E+LK LQEL+PN +K D V+ML++AI Y+K LQLQ+++L + PV
Sbjct: 146 VSRKRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGKGMAPV- 204
Query: 263 GGKAPDISQVREAIDA 278
P++ Q I A
Sbjct: 205 --VPPELQQYMHYITA 218
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +K+D +ML++AI Y+K LQLQV+++A
Sbjct: 359 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMA 409
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +MLE+AI Y+K LQLQV++++
Sbjct: 329 LSERRRRDRINEKMRALQELIPNCNKVDKSSMLEEAIEYLKTLQLQVQMMS 379
>gi|315175249|gb|ADT82843.1| barren stalk1/lax panicle1 [Pharus latifolius]
Length = 141
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 208 NRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 1 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVSL 45
>gi|315175245|gb|ADT82841.1| barren stalk1/lax panicle1 [Joinvillea ascendens]
Length = 140
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 209 RRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
RR RIS+R ++L+ LVP GSK+D V+MLE+AI YV+FL+ Q+++ T
Sbjct: 1 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIDYVQFLKAQIRLQQT 47
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +K+D +MLE+AI Y+K LQLQV++++
Sbjct: 268 MSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMS 318
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 44/53 (83%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
S++ K RR+RI+++++ LQEL+PN KVD +++L++AI Y+K LQLQV+V++
Sbjct: 388 HSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVMS 440
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +K+D +ML++AI Y+K LQLQV++++
Sbjct: 391 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS 441
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK--VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQELVPN K V++ ML++A+ YVK LQ QV+ LA
Sbjct: 478 PRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQKQVQELA 533
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
+ + RR+RI+E+L+ LQEL+PN +K D V+ML++AI Y+K LQLQ+++L + G
Sbjct: 26 FSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGK----GG 81
Query: 264 GKAPDI 269
G AP +
Sbjct: 82 GMAPVV 87
>gi|42408644|dbj|BAD09865.1| bHLH protein family-like [Oryza sativa Japonica Group]
gi|125561863|gb|EAZ07311.1| hypothetical protein OsI_29558 [Oryza sativa Indica Group]
gi|125603724|gb|EAZ43049.1| hypothetical protein OsJ_27638 [Oryza sativa Japonica Group]
Length = 246
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%), Gaps = 8/80 (10%)
Query: 182 IAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
IAA + N +T PPK DPQS+AA+ RRERISER++ILQ LVP G+K+D
Sbjct: 134 IAALQPVNIDPETVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTA 193
Query: 234 TMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL+ QV+ L
Sbjct: 194 SMLDEAIHYVKFLKTQVQSL 213
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +K+D +ML++AI Y+K LQLQV++++
Sbjct: 319 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS 369
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +K+D +ML++AI Y+K LQLQV++++
Sbjct: 391 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS 441
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 42/51 (82%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E++K LQEL+PN +K D +ML++AI Y+K LQLQ++VL+
Sbjct: 27 LSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVLS 77
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +K+D +ML++AI Y+K LQLQV+++A
Sbjct: 169 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMA 219
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +K+D +ML++AI Y+K LQLQV++++
Sbjct: 188 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS 238
>gi|315175247|gb|ADT82842.1| barren stalk1/lax panicle1 [Streptochaeta angustifolia]
Length = 125
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 209 RRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ Q+ +
Sbjct: 2 RRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQISL 45
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +K+D +ML++AI Y+K LQLQV++++
Sbjct: 447 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS 497
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE-FWPVQ 262
+ + RR+RI+E+LK LQEL+PN +K D V+ML++AI Y+K LQLQ+++L + PV
Sbjct: 27 FSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGKGMAPV- 85
Query: 263 GGKAPDISQVREAIDA 278
P++ Q I A
Sbjct: 86 --VPPELQQYMHYITA 99
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
++ K RR RI+E++K LQ L+PN SK D +ML+ AI Y+K LQLQV+++ DE
Sbjct: 39 LSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMIYPDEMM 94
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 86/149 (57%), Gaps = 16/149 (10%)
Query: 119 FDTASNYGFMINNSARDCHGDWLYTEATAV--TDTILESGSQDASSSLKRPNTGDS---- 172
F ++ + + ++ +R CH +L TAV + +L +G+ + SSS + ++
Sbjct: 70 FSSSPSVAALPDHLSRPCHSMFLGDGITAVDSSAALLPAGNPNVSSSSFGASENETDEYD 129
Query: 173 ------MQAVKKQCA-IAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVP 225
++A+ ++ A ++++K+ +A + +++ K RR RI+E++K LQ L+P
Sbjct: 130 CESEEGLEALVEEAAGKPGCGRSSSKRSRAA---EVHNMSEKRRRSRINEKMKALQNLIP 186
Query: 226 NGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
N +K D +ML++AI Y+K LQLQV++L+
Sbjct: 187 NSNKTDKASMLDEAIEYLKQLQLQVQMLS 215
>gi|413921862|gb|AFW61794.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 74/132 (56%), Gaps = 10/132 (7%)
Query: 131 NSARDCHGDWLYTEATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQC-AIAATKKTN 189
+A C+G +E A + G S+ + G S A+++ +AA + N
Sbjct: 85 GTAAPCNGSARSSEYVAHAQGPVAGGGNSGESTAAT-SVGSSSSAMREMIFRVAALQPVN 143
Query: 190 NKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 241
+ PPK DPQS+AA+ RRERISER++ILQ LVP G+K+D +ML++AI
Sbjct: 144 IDPEMVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIH 203
Query: 242 YVKFLQLQVKVL 253
YVKFL+ QV+ L
Sbjct: 204 YVKFLKTQVQSL 215
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +K+D +ML++AI Y+K LQLQV++++
Sbjct: 459 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS 509
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 54/81 (66%), Gaps = 8/81 (9%)
Query: 174 QAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
+A K+ C +TK++ + +++ + RR+RI+E++K LQEL+P +K D
Sbjct: 293 EAKKQVCGSTSTKRSRAAEV--------HNLSERRRRDRINEKMKALQELIPRCNKSDKA 344
Query: 234 TMLEKAISYVKFLQLQVKVLA 254
+ML++AISY+K LQLQV++++
Sbjct: 345 SMLDEAISYLKSLQLQVQMMS 365
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE---FWP 260
++ K RR RI+E++K LQ L+PN SK D +ML+ AI Y+K LQLQV++L+ P
Sbjct: 61 LSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRNGLYLPP 120
Query: 261 VQGGKAPD---ISQVREAID 277
V AP+ I Q+ A+D
Sbjct: 121 VNLSGAPEHLPIPQMSAALD 140
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 42/51 (82%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E++K LQEL+PN +K D +ML++AI Y+K LQLQ++VL+
Sbjct: 27 LSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVLS 77
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 9/84 (10%)
Query: 184 ATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 243
A K T K++ +A + +++ + RR+RI+E++K LQEL+P+ +K D +ML++AI Y+
Sbjct: 259 AQKTTTAKRRRAA---EVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYL 315
Query: 244 KFLQLQVKVLATDEFWPVQGGKAP 267
K LQLQ++++ W + GG AP
Sbjct: 316 KSLQLQLQMM-----W-MGGGMAP 333
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 9/84 (10%)
Query: 184 ATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 243
A K T K++ +A + +++ + RR+RI+E++K LQEL+P+ +K D +ML++AI Y+
Sbjct: 259 AQKTTTAKRRRAA---EVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYL 315
Query: 244 KFLQLQVKVLATDEFWPVQGGKAP 267
K LQLQ++++ W + GG AP
Sbjct: 316 KSLQLQLQMM-----W-MGGGMAP 333
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE---FWP 260
++ K RR RI+E++K LQ L+PN SK D +ML+ AI Y+K LQLQV++L+ P
Sbjct: 39 LSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRNGLYLPP 98
Query: 261 VQGGKAPD---ISQVREAID 277
V AP+ I Q+ A+D
Sbjct: 99 VNLSGAPEHLPIPQMSAALD 118
>gi|414869866|tpg|DAA48423.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 14/100 (14%)
Query: 182 IAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
+AA + N + + PPK DPQS+AA+ RRERISER+++LQ LVP G+K+D
Sbjct: 142 VAALQPVNIEPEMVRPPKRRNARISTDPQSVAARVRRERISERIRVLQRLVPGGTKMDTA 201
Query: 234 TMLEKAISYVKFLQLQVKVLATDEF------WPVQGGKAP 267
+ML++AI YVKFL+ QV+ L P GG AP
Sbjct: 202 SMLDEAIHYVKFLKTQVQSLERAAAADARRPVPDNGGAAP 241
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 9/84 (10%)
Query: 184 ATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 243
A K T K++ +A + +++ + RR+RI+E++K LQEL+P+ +K D +ML++AI Y+
Sbjct: 268 AQKTTTAKRRRAA---EVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYL 324
Query: 244 KFLQLQVKVLATDEFWPVQGGKAP 267
K LQLQ++++ W + GG AP
Sbjct: 325 KSLQLQLQMM-----W-MGGGMAP 342
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA +NRR RISER+K LQ+LVPN K + ML++A+ YVK LQ QVK L+
Sbjct: 25 PRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQVKDLS 79
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +K+D +ML++AI Y+K LQLQV++++
Sbjct: 412 LSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS 462
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE-FWPVQ 262
+ + RR+RI+E+LK LQEL+PN +K D V+ML++AI Y+K LQLQ+++L + PV
Sbjct: 26 FSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGKGMAPV- 84
Query: 263 GGKAPDISQVREAIDA 278
P++ Q I A
Sbjct: 85 --VPPELQQYMHYITA 98
>gi|357141633|ref|XP_003572294.1| PREDICTED: uncharacterized protein LOC100835736 [Brachypodium
distachyon]
Length = 252
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%), Gaps = 8/80 (10%)
Query: 182 IAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
IAA + N +T PPK DPQS+AA+ RRERISER++ILQ LVP G+K+D
Sbjct: 142 IAALQPVNIDPETVRPPKRRNVRISTDPQSVAARVRRERISERIRILQRLVPGGTKMDTA 201
Query: 234 TMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL+ QV+ L
Sbjct: 202 SMLDEAIHYVKFLKTQVQSL 221
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 11/109 (10%)
Query: 154 ESGSQDASSS-----LKRPNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAA 206
E+G Q SSS L PNT M A++K Q + + K K+ + P+SIA
Sbjct: 299 ETGGQQPSSSALAHQLSLPNTSAEMAAIEKFLQLSDSVPCKIRAKRGCAT---HPRSIAE 355
Query: 207 KNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
+ RR +ISER++ LQ+LVPN K + ML+ A+ Y+K LQ QV+ L+
Sbjct: 356 RVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQVQTLS 404
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE---FWP 260
++ K RR RI+E++K LQ L+PN SK D +ML+ AI Y+K LQLQV++L+ P
Sbjct: 61 LSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRNGLYVPP 120
Query: 261 VQGGKAPD---ISQVREAID 277
V AP+ I Q+ A+D
Sbjct: 121 VNLSGAPEHLPIPQMSAALD 140
>gi|255538274|ref|XP_002510202.1| transcription factor, putative [Ricinus communis]
gi|223550903|gb|EEF52389.1| transcription factor, putative [Ricinus communis]
Length = 274
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Query: 171 DSMQAVKKQC-AIAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQ 221
+SM A+++ IAA + + ++ PPK DPQS+AA++RRERISER++ILQ
Sbjct: 128 NSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 187
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 188 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 219
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 40/48 (83%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ RR+RI+E+++ LQEL+PN +K D +ML++AI Y+K LQLQ+++++
Sbjct: 605 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQMMS 652
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 44/53 (83%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
S++ K RR+RI+++++ LQEL+PN KVD +++L++AI Y+K LQLQV+V++
Sbjct: 19 HSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVMS 71
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+ +Q
Sbjct: 203 MSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLQP 262
Query: 264 GKAPDISQ 271
P + Q
Sbjct: 263 MCLPGMLQ 270
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 57/83 (68%), Gaps = 8/83 (9%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
TK++ + +++ A + +++ + RR+RI+E+++ LQEL+P+ K D +ML++AI Y+K
Sbjct: 176 TKRSGSTRRSRA--AEVHNLSERRRRDRINEKMRALQELIPHCYKTDKASMLDEAIEYLK 233
Query: 245 FLQLQVKVLATDEFWPVQGGKAP 267
LQLQ++V+ W + GG AP
Sbjct: 234 SLQLQLQVM-----W-MGGGMAP 250
>gi|315175241|gb|ADT82839.1| barren stalk1/lax panicle1 [Chasmanthium latifolium]
Length = 151
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 208 NRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ Q+ +
Sbjct: 1 ERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKGQISL 45
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 9/72 (12%)
Query: 192 QKTSAPPK---------DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
Q +APP+ + +++ K RR RI+E++K LQ L+PN +K D +ML++AI Y
Sbjct: 147 QTKAAPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEY 206
Query: 243 VKFLQLQVKVLA 254
+K LQLQV++L+
Sbjct: 207 LKQLQLQVQMLS 218
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
Query: 154 ESGSQDASSS-----LKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKN 208
E+G Q SSS L PNT M A++K ++ + + K P+SIA +
Sbjct: 296 ETGGQQPSSSALAHQLSLPNTSAEMAAIEKFLQLSDSVPCKIRAKRGCA-THPRSIAERV 354
Query: 209 RRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
RR +ISER++ LQ+LVPN K + ML+ A+ Y+K LQ QV+ L+
Sbjct: 355 RRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQVEALS 401
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
+ ++A+ ++ ++++K+ +A + +++ K RR RI+E++K LQ L+PN +K
Sbjct: 151 EGLEALVEELPTKPNPRSSSKRSRAA---EVHNLSEKRRRSRINEKMKALQNLIPNSNKT 207
Query: 231 DLVTMLEKAISYVKFLQLQVKVLA 254
D +ML++AI Y+K LQLQV++L+
Sbjct: 208 DKASMLDEAIEYLKQLQLQVQMLS 231
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 5/64 (7%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
++ + RR+RI+E+++ LQELVP+ +K D +ML++AI Y+K LQLQ++V+ W + G
Sbjct: 244 LSERRRRDRINEKMRALQELVPHCNKTDKASMLDEAIEYLKSLQLQLQVM-----WAMGG 298
Query: 264 GKAP 267
AP
Sbjct: 299 RMAP 302
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+ER+K LQEL+P +K D +ML++AI Y+K LQLQ++V++
Sbjct: 300 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQVMS 350
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT-DEFWP 260
+++ K RRE+I+++++ L+EL+PN +KVD +ML+ AI Y+K L+LQ+++++ + WP
Sbjct: 331 HNLSEKKRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTLKLQLQIMSMGNGLWP 390
Query: 261 V 261
+
Sbjct: 391 L 391
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE-FWPVQ 262
+ + RR+RI+E+LK LQEL+PN +K D V+ML++AI Y+K LQLQ+++L + PV
Sbjct: 20 FSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGKGMAPV- 78
Query: 263 GGKAPDISQVREAIDA 278
P++ Q I A
Sbjct: 79 --VPPELQQYMHYITA 92
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
+ ++A+ ++ ++++K+ +A + +++ K RR RI+E++K LQ L+PN +K
Sbjct: 151 EGLEALVEELPTKPNPRSSSKRSRAA---EVHNLSEKRRRSRINEKMKALQNLIPNSNKT 207
Query: 231 DLVTMLEKAISYVKFLQLQVKVLA 254
D +ML++AI Y+K LQLQV++L+
Sbjct: 208 DKASMLDEAIEYLKQLQLQVQMLS 231
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ K RR +I+E+LK LQ L+PN +K D +ML++AI Y+K LQLQV++L
Sbjct: 98 LSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 147
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 18/117 (15%)
Query: 156 GSQDASSSLKRPNTGDSMQ--AVKKQCAIAATKKTNNKQ--KTSAPPKD----------- 200
GS+D++S +PN GD + VK + A ++ NK K PPKD
Sbjct: 287 GSEDSNSKRSKPNEGDGNENGQVKVEEESKAEEEKQNKSNSKPPEPPKDYIHVRARRGQA 346
Query: 201 --PQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 347 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 403
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L
Sbjct: 194 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 243
>gi|242080239|ref|XP_002444888.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
gi|241941238|gb|EES14383.1| hypothetical protein SORBIDRAFT_07g000910 [Sorghum bicolor]
Length = 331
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL----- 253
+DPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI Y+KFL+ QV+ L
Sbjct: 184 EDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQHQPS 243
Query: 254 ATDEFWPVQGGKAPDISQV 272
T + +P G P S V
Sbjct: 244 PTQQQYPASAGAGPSTSVV 262
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+ +
Sbjct: 151 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHP 210
Query: 264 GKAPD-ISQVREAIDAILSSQRDRSSSSK 291
PD + ++ + + S+R+RS+ K
Sbjct: 211 MCFPDGLQPLQLSQMGMELSERNRSTPLK 239
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR RI+E++K LQ L+PN SK D +ML+ AI Y+K LQLQV++L+
Sbjct: 52 LSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLS 102
>gi|242080237|ref|XP_002444887.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
gi|241941237|gb|EES14382.1| hypothetical protein SORBIDRAFT_07g000900 [Sorghum bicolor]
Length = 348
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL----- 253
+DPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI Y+KFL+ QV+ L
Sbjct: 201 EDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQHQPS 260
Query: 254 ATDEFWPVQGGKAPDISQV 272
T + +P G P S V
Sbjct: 261 PTQQQYPASAGAGPSTSVV 279
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR RI+E++K LQ L+PN SK D +ML+ AI Y+K LQLQV++L+
Sbjct: 52 LSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLS 102
>gi|242081721|ref|XP_002445629.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
gi|241941979|gb|EES15124.1| hypothetical protein SORBIDRAFT_07g022920 [Sorghum bicolor]
Length = 269
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 8/80 (10%)
Query: 182 IAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
+AA + N + PPK DPQS+AA+ RRERISER++ILQ LVP G+K+D
Sbjct: 155 VAALQPVNIDPEMVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTA 214
Query: 234 TMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL+ QV+ L
Sbjct: 215 SMLDEAIHYVKFLKTQVQSL 234
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR RI+E++K LQ L+PN SK D +ML+ AI Y+K LQLQV++L+
Sbjct: 54 LSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLS 104
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
Query: 171 DSMQAVKKQCAI-AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSK 229
+ ++A+ ++ A AA ++++K+ +A + +++ K RR RI+E++K LQ L+PN +K
Sbjct: 115 EGLEALVEEVATKAAPLRSSSKRSRAA---EVHNLSEKRRRSRINEKMKALQNLIPNSNK 171
Query: 230 VDLVTMLEKAISYVKFLQLQVKVLA 254
D +ML++AI Y+K LQLQV++L+
Sbjct: 172 TDKASMLDEAIEYLKQLQLQVQMLS 196
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
+ ++A+ ++ A+ + ++++K+ +A + +++ K RR RI+E++K LQ L+PN +K
Sbjct: 121 EGLEALVEEAAVKSGGRSSSKRSRAA---EVHNLSEKRRRSRINEKMKALQNLIPNSNKT 177
Query: 231 DLVTMLEKAISYVKFLQLQVKVLATD---EFWPVQGGKAPDISQVR 273
D +ML++AI Y+K LQLQV++L+ P+ A SQ+R
Sbjct: 178 DKASMLDEAIEYLKQLQLQVQMLSMRNGMSLHPMCLPGASQFSQIR 223
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+
Sbjct: 113 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLS 163
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 38/46 (82%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
+ RR+RI+E+++ LQEL+PN +K D +MLE+AI Y+K LQLQ++V
Sbjct: 33 RRRRDRINEKMRALQELIPNSNKTDKASMLEEAIEYLKMLQLQLQV 78
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLATDEF 258
D S+A + RRERISER++ LQELVP SKV ML++ I+YV+ LQ QV+V T
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEVNGTAAA 214
Query: 259 WPV 261
W +
Sbjct: 215 WDI 217
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RIS+R++ LQELVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 198 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQIQEL 251
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 167 PNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELV 224
P T M A++K Q A K K+ + P+SIA + RR RISER++ LQELV
Sbjct: 277 PKTSSEMAAIEKFLQFQDAVPCKIRAKRGCAT---HPRSIAERVRRTRISERIRKLQELV 333
Query: 225 PNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
PN K + ML+ A+ Y+K LQ QVKV+
Sbjct: 334 PNMDKQTNTADMLDLAVDYIKELQEQVKVI 363
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+
Sbjct: 147 LSEKRRRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLS 197
>gi|224137546|ref|XP_002327153.1| predicted protein [Populus trichocarpa]
gi|222835468|gb|EEE73903.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Query: 171 DSMQAVKKQC-AIAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQ 221
+SM A+++ IAA + + ++ PPK DPQS+AA++RRERISER++ILQ
Sbjct: 123 NSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 182
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 183 RLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 214
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPV 261
+++ K RR +I+E++K LQ+L+PN +K D +ML++AI Y+K LQLQV+ LA +
Sbjct: 109 HNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQALAVMNGLGL 168
Query: 262 QGGKAPDISQ 271
+ P + Q
Sbjct: 169 NPMRLPPVMQ 178
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
++ K RR +I+E++K LQ+L+PN +K D +ML++AI Y+K LQLQV+ LA
Sbjct: 99 LSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQLQLQVQTLAV 150
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 19/106 (17%)
Query: 168 NTGDSMQAVKKQCAIAATKKTNNKQ-----KTSAPPKD-------------PQSIAAKNR 209
N D ++ +Q I +T +++ KQ KT PPKD S+A + R
Sbjct: 363 NEKDDAKSKAEQSTILSTGESSPKQTKDIVKTPEPPKDYIHVRARRGQATDSHSLAERVR 422
Query: 210 RERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
RE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 423 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 468
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+
Sbjct: 169 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLS 219
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV+ L
Sbjct: 130 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQYL 181
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 54/77 (70%), Gaps = 6/77 (7%)
Query: 178 KQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE 237
KQC+ T +++K+ +A + +++ K RR RI+E++K LQ L+PN +K D +ML+
Sbjct: 143 KQCS---TGTSSSKRSRAA---EVHNLSEKRRRNRINEKMKALQNLIPNSNKTDKASMLD 196
Query: 238 KAISYVKFLQLQVKVLA 254
+AI Y+K LQLQV++L+
Sbjct: 197 EAIEYLKKLQLQVQMLS 213
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 39/49 (79%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
+ RR+RI+E+++ LQEL+PN +K D +ML++AI Y+K LQLQ++V A
Sbjct: 33 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVCAV 81
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 167 PNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELV 224
P T M A++K Q A K K+ + P+SIA + RR RISER++ LQELV
Sbjct: 284 PKTSSEMAAIEKFLQFQDAVPCKIRAKRGCAT---HPRSIAERVRRTRISERIRKLQELV 340
Query: 225 PNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
PN K + ML+ A+ Y+K LQ QVKV+
Sbjct: 341 PNMDKQTNTADMLDLAVDYIKELQEQVKVI 370
>gi|224084350|ref|XP_002307268.1| predicted protein [Populus trichocarpa]
gi|222856717|gb|EEE94264.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 58/80 (72%), Gaps = 8/80 (10%)
Query: 182 IAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
IAA + + ++ PPK DPQS+AA++RRERISER++ILQ LVP G+K+D
Sbjct: 139 IAAMQPAHIDPESVKPPKRKNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 198
Query: 234 TMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL++QV+ L
Sbjct: 199 SMLDEAIHYVKFLKMQVQSL 218
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 41/48 (85%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ RR+RI+E+++ LQEL+PN +K+D +ML++AI Y+K LQLQV++++
Sbjct: 10 QRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS 57
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+ER+K LQEL+P +K D +ML++AI Y+K LQLQ+++++
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMS 270
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+ER+K LQEL+P +K D +ML++AI Y+K LQLQ+++++
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMS 341
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+ER+K LQEL+P +K D +ML++AI Y+K LQLQ+++++
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMS 270
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L
Sbjct: 132 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 181
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+
Sbjct: 118 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLS 168
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+
Sbjct: 191 LSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLS 241
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+ER+K LQEL+P +K D +ML++AI Y+K LQLQ+++++
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMS 341
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 6/61 (9%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKA 266
+ RR+RI+E+++ LQ+L+PN +K D +MLE+AI Y+K LQ Q++V+ W + GG
Sbjct: 370 RRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVM-----W-MGGGMT 423
Query: 267 P 267
P
Sbjct: 424 P 424
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RIS+R++ LQELVPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 193 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQKQIQEL 246
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 179
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L
Sbjct: 181 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 232
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
++ K RR +I+E++K LQ+L+PN +K D +ML++AI Y+K LQLQV+ LA
Sbjct: 99 LSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 150
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPV 261
+++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+ +
Sbjct: 201 HNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSL 260
Query: 262 QGGKAPDISQ 271
Q P + Q
Sbjct: 261 QPMCLPGVLQ 270
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
++ K RR RI+E++K LQ L+PN SK D +ML+ AI Y+K LQLQV++L+ +
Sbjct: 53 LSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRNGLYLPP 112
Query: 264 GKAPDISQVREAI 276
G ++S V EA+
Sbjct: 113 G---NLSGVPEAL 122
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 38/47 (80%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+ RR+RI+E+++ LQ+L+PN +K D +MLE+AI Y+K LQ Q++V+
Sbjct: 370 RRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVM 416
>gi|224117360|ref|XP_002317553.1| predicted protein [Populus trichocarpa]
gi|222860618|gb|EEE98165.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
DS AVKK A K+ N+ + +P A K R+E++ +R+ LQ+LV K
Sbjct: 312 DSNTAVKKSGGEAGAKRPRNETPSPSP-------AFKARKEKMGDRITALQQLVSPFGKT 364
Query: 231 DLVTMLEKAISYVKFLQLQVKVLAT 255
D ++L +AI Y+KFL QV VL T
Sbjct: 365 DTASVLSEAIEYIKFLHEQVTVLCT 389
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
++ K RR +I+E++K LQ+L+PN +K D +ML++AI Y+K LQLQV+ LA
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ + RR+RI+E+LK LQEL+PN +K D V+ML++AI Y+K LQ+Q+++L
Sbjct: 24 FSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQMLV 74
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
++ K RR +I+E++K LQ+L+PN +K D +ML++AI Y+K LQLQV+ LA
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
++ K RR +I+E++K LQ+L+PN +K D +ML++AI Y+K LQLQV+ LA
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR +I+E++K LQ LVPN SK D +ML+ AI Y+K LQLQV++L+
Sbjct: 57 LSEKRRRCKINEKMKALQSLVPNSSKTDKASMLDDAIEYLKHLQLQVQMLS 107
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 40/48 (83%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ RR+RI+E+++ LQEL+PN +K D +ML++AI Y+K LQLQ+++++
Sbjct: 744 RRRRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQMMS 791
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ QVKVL
Sbjct: 329 PRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVL 382
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR RI+E++K LQ LVPN SK D +ML+ AI Y+K LQLQV++L+
Sbjct: 72 LSEKRRRCRINEKMKALQSLVPNSSKTDKASMLDDAIEYLKQLQLQVQMLS 122
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 8/68 (11%)
Query: 196 APPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQ 247
APP+ + +++ K RR RI+E++K LQ L+PN SK D +ML++AI Y+K LQ
Sbjct: 129 APPRSSKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSKTDKASMLDEAIEYLKLLQ 188
Query: 248 LQVKVLAT 255
LQV+ L+
Sbjct: 189 LQVQGLSV 196
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ QVKVL
Sbjct: 328 PRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVL 381
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E++K LQEL+P +K D +ML++AI Y+K LQLQV++++
Sbjct: 270 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 320
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ QVKVL
Sbjct: 307 PRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKVL 360
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 40/49 (81%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
++ + RR+RI+E+++ LQEL+PN +K D +ML++AI Y+K LQLQ++V
Sbjct: 24 LSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQV 72
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L
Sbjct: 151 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLT 203
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 69/116 (59%), Gaps = 8/116 (6%)
Query: 144 EATAVTDTILESGSQDASSSLKR-----PNTGDSMQAVKKQCAIAATKKTNNKQKTSAPP 198
+ TA + S D +SSL+R T S ++++ + A +K++ +
Sbjct: 326 QLTATSSICSRGASNDPTSSLERQYEDTEGTAYSSDDLEEEEQVPARGSAGSKRRRAT-- 383
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ +++ + RR+RI+++++ LQ+L+PN +KVD +ML +AI Y+K LQLQV++++
Sbjct: 384 -EIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMS 438
>gi|356565592|ref|XP_003551023.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 299
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 66/100 (66%), Gaps = 9/100 (9%)
Query: 163 SLKRPNTGDSMQAVKKQC-AIAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERI 213
S K+ +SM A+++ IA + + ++ PPK DPQS+AA++RRERI
Sbjct: 111 SEKKKKNNNSMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERI 170
Query: 214 SERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
SER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 171 SERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 210
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RIS+R++ LQELVPN K + ML++A++YVKFLQ Q++ L
Sbjct: 180 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQRQIQEL 233
>gi|357128639|ref|XP_003565978.1| PREDICTED: uncharacterized protein LOC100831424 [Brachypodium
distachyon]
Length = 299
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 14/96 (14%)
Query: 168 NTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKD-----------PQSIAAKNRRERISER 216
NT D+ + C + AT+ T + + ++ PQ++AA+ RRE++SER
Sbjct: 139 NTHDA-EVASPPCIVPATRTTTGTEAMAQAKQEAIIYRAAAAAEPQTVAARLRREKVSER 197
Query: 217 LKILQELVPNG--SKVDLVTMLEKAISYVKFLQLQV 250
L+ L+ LVP G K+D +ML +A Y+ FL+ Q+
Sbjct: 198 LRALRRLVPGGGSGKMDTASMLHQAACYLSFLKAQL 233
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 41/50 (82%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ + RR+RI+E++K LQEL+P+ +K D +ML++AI Y+K LQ+QV+++
Sbjct: 273 LSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMM 322
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ + RR++I+E+LK LQEL+PN +K D V+ML++AI Y+K LQLQ+++L
Sbjct: 25 FSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQMLV 75
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 160 ASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKI 219
+SSSL+ P D +Q +Q ++A + T P+SIA + RR RIS+RL+
Sbjct: 271 SSSSLEMPGMDDYLQL--QQDSVACRVRAKRGCAT-----HPRSIAERERRTRISKRLRK 323
Query: 220 LQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
LQ+LVPN K + ML+ A+ Y+K LQ Q++ L D+
Sbjct: 324 LQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQIEKLKQDQ 362
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ + RR++I+E+LK LQEL+PN +K D V+ML++AI Y+K LQLQ+++L
Sbjct: 25 FSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQMLV 75
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E++K LQEL+P +K D +ML++AI Y+K LQLQV++++
Sbjct: 308 LSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMS 358
>gi|297819712|ref|XP_002877739.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
gi|297323577|gb|EFH53998.1| hypothetical protein ARALYDRAFT_485384 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L +E
Sbjct: 120 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL--EEH 177
Query: 259 WPVQGG 264
V GG
Sbjct: 178 AVVNGG 183
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E++K LQEL+P +K D +ML++AI Y+K LQLQV++++
Sbjct: 323 LSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQMMS 373
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 184 ATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 243
A + T K++ +A +++ + RR+RI+E++K LQEL+P+ +K D +ML++AI Y+
Sbjct: 241 AQRTTTAKRRRAA---QVHNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYL 297
Query: 244 KFLQLQVKVL 253
K LQLQ++V+
Sbjct: 298 KSLQLQLQVV 307
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E++K LQEL+P +K D +ML++AI Y+K LQLQV++++
Sbjct: 312 LSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMS 362
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 69/116 (59%), Gaps = 8/116 (6%)
Query: 144 EATAVTDTILESGSQDASSSLKR-----PNTGDSMQAVKKQCAIAATKKTNNKQKTSAPP 198
+ TA + S D +SSL+R T S ++++ + A +K++ +
Sbjct: 320 QLTATSSICSRGASNDPTSSLERQYEDTEGTAYSSDDLEEEEQVPARGSAGSKRRRAT-- 377
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ +++ + RR+RI+++++ LQ+L+PN +KVD +ML +AI Y+K LQLQV++++
Sbjct: 378 -EIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMS 432
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 42/53 (79%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+++ + RR+RI+E++K LQEL+P +K D +ML++AI Y+K LQLQV++++
Sbjct: 281 HNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 333
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQELVPN K + ML+ A+ Y+K LQ+QVKV+
Sbjct: 337 PRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQVKVM 390
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPV 261
+++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+ +
Sbjct: 201 HNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSL 260
Query: 262 QGGKAPDISQ 271
Q P + Q
Sbjct: 261 QPMCLPGMLQ 270
>gi|356518097|ref|XP_003527719.1| PREDICTED: uncharacterized protein LOC100788158 [Glycine max]
gi|83853832|gb|ABC47864.1| bhelix-loop-helix transcription factor [Glycine max]
Length = 258
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 155 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 209
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E++K LQEL+P +K D +ML++AI Y+K LQLQV++++
Sbjct: 315 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 365
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
++ K RR +I+E++K LQ+L+PN +K D +ML++AI Y+K LQLQV+ LA
Sbjct: 96 LSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 147
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Query: 186 KKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKF 245
+ +NK++T A + +++ + RR+RI+E+++ LQELVP+ +K D ++L++AI Y+K
Sbjct: 239 RPASNKRRTRA--AEVHNMSERRRRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKS 296
Query: 246 LQLQVKVL 253
LQ+QV+++
Sbjct: 297 LQMQVQIM 304
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQELVPN K + ML+ A+ Y+K LQ+QVKV+
Sbjct: 334 PRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQVKVM 387
>gi|15229725|ref|NP_190602.1| transcription factor HEC2 [Arabidopsis thaliana]
gi|75313649|sp|Q9SND4.1|HEC2_ARATH RecName: Full=Transcription factor HEC2; AltName: Full=Basic
helix-loop-helix protein 37; Short=AtbHLH37; Short=bHLH
37; AltName: Full=Protein HECATE 2; AltName:
Full=Transcription factor EN 117; AltName: Full=bHLH
transcription factor bHLH037
gi|6523044|emb|CAB62312.1| putative protein [Arabidopsis thaliana]
gi|37202028|gb|AAQ89629.1| At3g50330 [Arabidopsis thaliana]
gi|51969500|dbj|BAD43442.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|51969966|dbj|BAD43675.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
gi|332645132|gb|AEE78653.1| transcription factor HEC2 [Arabidopsis thaliana]
Length = 231
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 10/91 (10%)
Query: 182 IAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
IA + + ++ PPK DPQS+AA++RRERISER++ILQ LVP G+K+D
Sbjct: 102 IAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 161
Query: 234 TMLEKAISYVKFLQLQVKVLATDEFWPVQGG 264
+ML++AI YVKFL+ QV+ L +E V GG
Sbjct: 162 SMLDEAIHYVKFLKKQVQSL--EEHAVVNGG 190
>gi|224063507|ref|XP_002301178.1| predicted protein [Populus trichocarpa]
gi|222842904|gb|EEE80451.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 8/80 (10%)
Query: 182 IAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
IAA + ++ PPK DPQS+AA++RRERISER++ILQ LVP G+K+D
Sbjct: 133 IAAMQPIQIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 192
Query: 234 TMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL+ QV+ L
Sbjct: 193 SMLDEAIHYVKFLKTQVQSL 212
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 41/50 (82%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ + RR+RI+E+++ LQEL+P+ +K D +ML++AI Y+K LQLQV+++
Sbjct: 340 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMM 389
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 41/50 (82%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ + RR+RI+E+++ LQEL+P+ +K D +ML++AI Y+K LQLQV+++
Sbjct: 340 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMM 389
>gi|357158743|ref|XP_003578226.1| PREDICTED: uncharacterized protein LOC100844721 [Brachypodium
distachyon]
Length = 247
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 6/86 (6%)
Query: 168 NTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNG 227
N D ++A A+ KK +TS KDPQS+AA+ RRERISER+++LQ LVP G
Sbjct: 141 NDDDDVEAAG---AVRPAKKQRRNVRTS---KDPQSVAARLRRERISERIRVLQRLVPGG 194
Query: 228 SKVDLVTMLEKAISYVKFLQLQVKVL 253
+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 195 TKMDTASMLDEAIHYVKFLKSQVQSL 220
>gi|356509739|ref|XP_003523603.1| PREDICTED: transcription factor HEC1-like [Glycine max]
gi|83853819|gb|ABC47852.1| bHelix-loop-helix transcription factor [Glycine max]
Length = 264
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 152 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 206
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 183 AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
+++++ +K++T A + +++ + RR+RI+E+++ LQEL+P+ +K D ++L++AI Y
Sbjct: 208 SSSRRYGSKRRTRA--AEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEY 265
Query: 243 VKFLQLQVKVL 253
+K LQ+QV+++
Sbjct: 266 LKSLQMQVQIM 276
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 183 AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
+++++ +K++T A + +++ + RR+RI+E+++ LQEL+P+ +K D ++L++AI Y
Sbjct: 308 SSSRRYGSKRRTRA--AEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEY 365
Query: 243 VKFLQLQVKVL 253
+K LQ+QV+++
Sbjct: 366 LKSLQMQVQIM 376
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 164 LKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQEL 223
L PNT M A++K + + + K P+SIA + RR +ISER++ LQEL
Sbjct: 333 LSLPNTSAEMNAIEKILQFSDSVPCKLRAKRGCA-THPRSIAERVRRTKISERMRKLQEL 391
Query: 224 VPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
VPN K + ML+ A+ Y+K LQ QV+ L+
Sbjct: 392 VPNMDKQTNTSDMLDLAVEYIKGLQKQVQTLS 423
>gi|51970182|dbj|BAD43783.1| putative bHLH transcription factor (bHLH037) [Arabidopsis thaliana]
Length = 231
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L +E
Sbjct: 127 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL--EEH 184
Query: 259 WPVQGG 264
V GG
Sbjct: 185 AVVNGG 190
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 51/71 (71%), Gaps = 7/71 (9%)
Query: 186 KKTNNKQKTSAPPKDPQ--SIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 243
K T+ K+K + PQ S++ + RR++I+++++ LQ L+PN KVD +ML+KAI Y+
Sbjct: 372 KSTSTKKK-----RIPQVHSLSERKRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYL 426
Query: 244 KFLQLQVKVLA 254
K LQLQ+++++
Sbjct: 427 KTLQLQLQMMS 437
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 183 AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
+++++ +K++T A + +++ + RR+RI+E+++ LQEL+P+ +K D ++L++AI Y
Sbjct: 219 SSSRRYGSKRRTRA--AEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEY 276
Query: 243 VKFLQLQVKVL 253
+K LQ+QV+++
Sbjct: 277 LKSLQMQVQIM 287
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E++K LQEL+P +K D +ML++AI Y+K LQLQV++++
Sbjct: 277 LSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 327
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 164 LKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQEL 223
L PNT M A++K + + + K P+SIA + RR +ISER++ LQEL
Sbjct: 333 LSLPNTSAEMNAIEKILQFSDSVPCKLRAKRGCA-THPRSIAERVRRTKISERMRKLQEL 391
Query: 224 VPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
VPN K + ML+ A+ Y+K LQ QV+ L+
Sbjct: 392 VPNMDKQTNTSDMLDLAVEYIKGLQKQVQTLS 423
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 183 AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
+++++ +K++T A + +++ + RR+RI+E+++ LQEL+P+ +K D ++L++AI Y
Sbjct: 324 SSSRRYGSKRRTRA--AEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEY 381
Query: 243 VKFLQLQVKVL 253
+K LQ+QV+++
Sbjct: 382 LKSLQMQVQIM 392
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 40/51 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+ER+K LQEL+PN +K D +ML++AI Y+K LQ Q++V+
Sbjct: 15 LSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQVVC 65
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 17/90 (18%)
Query: 182 IAATKKTNNKQ---KTSAPPKD-------------PQSIAAKNRRERISERLKILQELVP 225
I+A++K+N KQ + AP +D S+A + RRE+ISER+K LQ+LVP
Sbjct: 238 ISASRKSNGKQTEDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVP 297
Query: 226 NGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 298 GCSKVIGKAVMLDEIINYVQSLQRQVEFLS 327
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 41/50 (82%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ + RR+RI+E+++ LQEL+P+ +K D +ML++AI Y+K LQLQV+++
Sbjct: 335 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQMM 384
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ + RR+RI+ER+K LQEL+PN +K D +ML++AI Y+K LQ Q++V+
Sbjct: 15 LSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQVV 64
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RIS+R++ LQE+VPN K + MLE+A+ YVKFLQ Q++ L
Sbjct: 178 PRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQEL 231
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 17/90 (18%)
Query: 182 IAATKKTNNKQ---KTSAPPKD-------------PQSIAAKNRRERISERLKILQELVP 225
I+A++K+N KQ + AP +D S+A + RRE+ISER+K LQ+LVP
Sbjct: 238 ISASRKSNGKQTEDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVP 297
Query: 226 NGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 298 GCSKVIGKAVMLDEIINYVQSLQRQVEFLS 327
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPV 261
+ RR++I++R+K LQ+LVPN SK D +ML++ I Y+K LQ QV++++ PV
Sbjct: 293 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSRMNIQPV 347
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RIS+R++ LQELVPN K + ML++A++YVKFLQ Q++ L+
Sbjct: 128 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEELS 182
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 167 PNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELV 224
P T M A++K Q A K K+ + P+ SIA + RR RISER++ LQELV
Sbjct: 299 PKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPR---SIAERVRRTRISERIRKLQELV 355
Query: 225 PNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
PN K + ML+ A+ Y+K LQ QVK L
Sbjct: 356 PNMDKQTNTADMLDLAVDYIKDLQKQVKGL 385
>gi|26185713|emb|CAD58595.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 175
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 210 RERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
RERI+ER+K LQEL+P K D V+MLE I YVK LQLQ+++++
Sbjct: 1 RERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMS 45
>gi|15242494|ref|NP_196537.1| transcription factor HEC3 [Arabidopsis thaliana]
gi|75311668|sp|Q9LXD8.1|HEC3_ARATH RecName: Full=Transcription factor HEC3; AltName: Full=Basic
helix-loop-helix protein 43; Short=AtbHLH43; Short=bHLH
43; AltName: Full=Protein HECATE 3; AltName:
Full=Transcription factor EN 119; AltName: Full=bHLH
transcription factor bHLH043
gi|7671414|emb|CAB89355.1| putative protein [Arabidopsis thaliana]
gi|9759006|dbj|BAB09533.1| unnamed protein product [Arabidopsis thaliana]
gi|332004059|gb|AED91442.1| transcription factor HEC3 [Arabidopsis thaliana]
Length = 224
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+MQ+V A K N + + DPQS+AA++RRERISER++ILQ LVP G+K+D
Sbjct: 104 AMQSVDIDPATVKKPKRRNVRISD----DPQSVAARHRRERISERIRILQRLVPGGTKMD 159
Query: 232 LVTMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL+ Q+++L
Sbjct: 160 TASMLDEAIRYVKFLKRQIRLL 181
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E++K LQEL+P +K D +ML++AI Y+K LQLQV++++
Sbjct: 265 LSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQMMS 315
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ QVK L+
Sbjct: 229 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKTLS 283
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQELVPN K + ML+ A+ Y+K LQ QVKVL
Sbjct: 335 PRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVKVL 388
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 40/51 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR +I+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+
Sbjct: 112 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLS 162
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 41/50 (82%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ + RR+RI+E+++ LQEL+P+ +K D +ML++AI Y+K LQ+QV+++
Sbjct: 322 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMM 371
>gi|449447251|ref|XP_004141382.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524104|ref|XP_004169063.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 238
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%), Gaps = 5/73 (6%)
Query: 181 AIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240
A+ K+ N K T DPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI
Sbjct: 130 AVKPPKRRNVKIST-----DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI 184
Query: 241 SYVKFLQLQVKVL 253
YVKFL+ QV+ L
Sbjct: 185 HYVKFLKTQVQSL 197
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 17/90 (18%)
Query: 182 IAATKKTNNKQ---KTSAPPKD-------------PQSIAAKNRRERISERLKILQELVP 225
I ++K+N KQ K+ AP +D S+A + RRE+ISER+K LQ+LVP
Sbjct: 240 IVTSRKSNGKQTEDKSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVP 299
Query: 226 NGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 300 GCSKVIGKAVMLDEIINYVQSLQRQVEFLS 329
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
+K+ K++T A + +++ + RR+RI+E+L+ LQELVP+ +K D ++L++AI Y+K
Sbjct: 394 SKRPAAKRRTRA--AEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLK 451
Query: 245 FLQLQVKVL 253
LQ+QV+++
Sbjct: 452 SLQMQVQIM 460
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RIS+R++ LQELVPN K + MLE+A+ YVKFLQ +++ L+
Sbjct: 115 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELS 169
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP KV ML++ I+YV+FLQ QV+ L+
Sbjct: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
+K+ K++T A + +++ + RR+RI+E+L+ LQELVP+ +K D ++L++AI Y+K
Sbjct: 218 SKRPAAKRRTRA--AEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLK 275
Query: 245 FLQLQVKVL 253
LQ+QV+++
Sbjct: 276 SLQMQVQIM 284
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 47/66 (71%), Gaps = 6/66 (9%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
++ + RR+RI+E+++ LQEL+P+ +K D +ML++AI Y+K LQLQ++++ W +
Sbjct: 325 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM-----W-MGS 378
Query: 264 GKAPDI 269
G AP +
Sbjct: 379 GMAPPV 384
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RIS+R++ LQELVPN K + MLE+A+ YVKFLQ +++ L+
Sbjct: 185 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQKIQELS 239
>gi|449493201|ref|XP_004159220.1| PREDICTED: uncharacterized protein LOC101232790 [Cucumis sativus]
Length = 312
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
P+S A+ RR+++S++ + LQ+L+P K+D+ TMLE+A YVKFLQ Q+ L
Sbjct: 180 PRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLAL 232
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER+K LQEL P+ K MLE A+ Y+K LQ QVK L
Sbjct: 352 PRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQVKTL 405
>gi|293333080|ref|NP_001168866.1| uncharacterized protein LOC100382671 [Zea mays]
gi|223973413|gb|ACN30894.1| unknown [Zea mays]
Length = 335
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 6/83 (7%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL----- 253
+DPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI Y+KFL+ QV+ L
Sbjct: 186 EDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQHQPP 245
Query: 254 -ATDEFWPVQGGKAPDISQVREA 275
+ +P G P S V A
Sbjct: 246 QPQHQQYPAAAGAGPSTSVVGSA 268
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
+K+ K++T A + +++ + RR+RI+E+L+ LQELVP+ +K D ++L++AI Y+K
Sbjct: 215 SKRPAAKRRTRA--AEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLK 272
Query: 245 FLQLQVKVL 253
LQ+QV+++
Sbjct: 273 SLQMQVQIM 281
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 40/51 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR +I+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+
Sbjct: 33 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLS 83
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQELVPN K + ML+ A+ Y+K LQ QVKVL
Sbjct: 170 PRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVKVL 223
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 39/47 (82%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+ RR+RI+E++K LQELVP+ +K D ++L++AI Y+K LQLQV+++
Sbjct: 153 RRRRDRINEKMKALQELVPHCNKSDKASILDEAIEYLKSLQLQVQIM 199
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RIS+R++ LQELVPN K + MLE+A+ YVK LQ Q++ L ++
Sbjct: 194 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQ 251
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 40/51 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR +I+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+
Sbjct: 90 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLS 140
>gi|255565212|ref|XP_002523598.1| DNA binding protein, putative [Ricinus communis]
gi|223537160|gb|EEF38793.1| DNA binding protein, putative [Ricinus communis]
Length = 278
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%), Gaps = 8/80 (10%)
Query: 182 IAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
IAA + + ++ PPK DPQS+AA++RRERISER++ILQ LVP G+K+D
Sbjct: 152 IAAMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 211
Query: 234 TMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL+ QV+ L
Sbjct: 212 SMLDEAIHYVKFLKKQVQSL 231
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 47/66 (71%), Gaps = 6/66 (9%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
++ + RR+RI+E+++ LQEL+P+ +K D +ML++AI Y+K LQLQ++++ W +
Sbjct: 325 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM-----W-MGS 378
Query: 264 GKAPDI 269
G AP +
Sbjct: 379 GMAPPV 384
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 164 LKRPNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQ 221
L PNT M A++K Q + + K K+ + P+ SIA + RR +ISER++ LQ
Sbjct: 307 LSLPNTSAEMAAIEKFLQFSDSVPCKIRAKRGCATHPR---SIAERVRRTKISERMRKLQ 363
Query: 222 ELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
+LVPN K + ML+ A+ Y+K LQ QV+ L+
Sbjct: 364 DLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTLS 397
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 167 PNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELV 224
P T M A++K Q A K K+ + P+SIA + RR RISER++ LQELV
Sbjct: 295 PKTSSEMAAIEKFLQFQDAVPCKIRAKRGCAT---HPRSIAERVRRTRISERIRKLQELV 351
Query: 225 PNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
PN K + ML+ A+ Y+K LQ QVK L
Sbjct: 352 PNMDKQTNTADMLDLAVDYIKDLQKQVKGL 381
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RIS+R++ LQELVPN K + MLE+A+ YVK LQ Q++ L ++
Sbjct: 196 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQ 253
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+P +K D +ML++AI Y+K LQLQV++++
Sbjct: 374 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 424
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER+K LQELVPN + + ML+ A+ YVK LQLQV+ L
Sbjct: 389 PRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQVQEL 442
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 48/68 (70%), Gaps = 6/68 (8%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPV 261
+++ + RR+RI+E+++ LQEL+P+ +K D +ML++AI Y+K LQLQ++++ W +
Sbjct: 304 HNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM-----W-M 357
Query: 262 QGGKAPDI 269
G AP +
Sbjct: 358 GSGMAPPV 365
>gi|356511883|ref|XP_003524651.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 273
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 153 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 207
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 41/50 (82%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ + RR+RI+E+++ LQEL+P+ +K D +ML++AI Y+K LQLQ++V+
Sbjct: 41 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVM 90
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 42/51 (82%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
+++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV+V
Sbjct: 9 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQV 59
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQELVPN K + ML+ A+ Y+K LQ QVKVL
Sbjct: 295 PRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQVKVL 348
>gi|356514923|ref|XP_003526151.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 489
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
DS VKK + AA K+ N+ + P A K R+E++ +R+ LQ+LV K
Sbjct: 350 DSGGVVKKSGSEAAPKRPRNETPSPLP-------AFKVRKEKMGDRITALQQLVSPFGKT 402
Query: 231 DLVTMLEKAISYVKFLQLQVKVLAT 255
D ++L +AI Y+KFL QV VL+T
Sbjct: 403 DTASVLSEAIEYIKFLHEQVTVLST 427
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RIS+R++ LQELVPN K + ML++A++YVKFLQ Q++ L+
Sbjct: 91 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQIEELS 145
>gi|255586237|ref|XP_002533773.1| DNA binding protein, putative [Ricinus communis]
gi|223526310|gb|EEF28618.1| DNA binding protein, putative [Ricinus communis]
Length = 288
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE 257
QSIAA+ RR +I+ER + L +L+P G+K++ ML+ A +YVKFLQ QV +L E
Sbjct: 166 QSIAARERRRKITERTQELGKLIPGGNKMNTAEMLQSASNYVKFLQAQVGILELME 221
>gi|294460878|gb|ADE76012.1| unknown [Picea sitchensis]
Length = 171
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 7/60 (11%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQSIAA++RR +I +R KILQ +VP G +D V+ML++AI YVKFLQ FW
Sbjct: 40 DPQSIAARHRRHKIRKRFKILQSMVPGGKNMDTVSMLDEAIQYVKFLQFM-------HFW 92
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
+K+ K++T A + +++ + RR+RI+E+L+ LQELVP+ +K D ++L++AI Y+K
Sbjct: 219 SKRPAAKRRTRA--AEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLK 276
Query: 245 FLQLQVKVL 253
LQ+QV+++
Sbjct: 277 SLQMQVQIM 285
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQELVPN K + ML+ A+ Y+K LQ QVKVL
Sbjct: 302 PRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKVL 355
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 38/48 (79%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ RR++I++R+KILQ+LVPN SK D +ML++ I Y+K LQ QV +++
Sbjct: 225 RKRRDKINQRMKILQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 272
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 167 PNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELV 224
P T M A++K Q A K K+ + P+ SIA + RR +ISER++ LQELV
Sbjct: 294 PKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPR---SIAERVRRTKISERIRKLQELV 350
Query: 225 PNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
PN K + ML+ A+ Y+K LQ QVK L
Sbjct: 351 PNMDKQTNTSDMLDLAVDYIKDLQKQVKAL 380
>gi|225438732|ref|XP_002277850.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|296082413|emb|CBI21418.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Query: 171 DSMQAVKKQC-AIAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQ 221
+SM A+++ +IA + + ++ PPK DPQS+AA++RRERISER++ILQ
Sbjct: 115 NSMAAMREMIFSIAVMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQ 174
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 175 RLVPGGTKMDTASMLDEAIHYVKFLKNQVQSL 206
>gi|356545213|ref|XP_003541039.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 347
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
DS VKK + AA K+ N+ + P A K R+E++ +R+ LQ+LV K
Sbjct: 208 DSSGVVKKSGSEAAPKRPRNETPSPLP-------AFKVRKEKMGDRITALQQLVSPFGKT 260
Query: 231 DLVTMLEKAISYVKFLQLQVKVLAT 255
D ++L +AI Y+KFL QV VL+T
Sbjct: 261 DTASVLSEAIEYIKFLHEQVTVLST 285
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+P +K D +ML++AI Y+K LQLQV++++
Sbjct: 367 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 417
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 38/48 (79%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ RR+RI++++K LQ+LVPN SK D +ML++ I Y+K LQ QV++++
Sbjct: 233 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMS 280
>gi|297811073|ref|XP_002873420.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
gi|297319257|gb|EFH49679.1| hypothetical protein ARALYDRAFT_487795 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+MQ+V A K N + + DPQS+AA++RRERISER++ILQ LVP G+K+D
Sbjct: 97 AMQSVDIDPATVKKPKRRNVRISD----DPQSVAARHRRERISERIRILQRLVPGGTKMD 152
Query: 232 LVTMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL+ Q+++L
Sbjct: 153 TASMLDEAIRYVKFLKRQIRLL 174
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 38/48 (79%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ RR+RI++++K LQ+LVPN SK D +ML++ I Y+K LQ QV++++
Sbjct: 195 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMS 242
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
+K+ K++T A + +++ + RR+RI+E+L+ LQELVP+ +K D ++L++AI Y+K
Sbjct: 318 SKRPAAKRRTRA--AEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLK 375
Query: 245 FLQLQVKVL 253
LQ+QV+++
Sbjct: 376 SLQMQVQIM 384
>gi|449435928|ref|XP_004135746.1| PREDICTED: uncharacterized protein LOC101220022 [Cucumis sativus]
gi|449515945|ref|XP_004165008.1| PREDICTED: uncharacterized protein LOC101226994 [Cucumis sativus]
Length = 308
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
Q+IAA+ RR +I+ + + L ELVP GSK++ ML A YVKFLQ QV +L
Sbjct: 189 QTIAARERRRKITVKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAIL 240
>gi|358345067|ref|XP_003636605.1| Transcription factor bHLH123 [Medicago truncatula]
gi|355502540|gb|AES83743.1| Transcription factor bHLH123 [Medicago truncatula]
Length = 436
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 21/116 (18%)
Query: 154 ESGSQDASSSL----KRPNTG----------DSMQAVKKQCAIAATKKTNNKQKTSAPPK 199
E+ +DASSS PN G DS VKK + A K++ N+ + P
Sbjct: 266 ETTIKDASSSFLPPFTTPNFGAQTKNISEGRDSSAMVKKSGSEPAPKRSKNETPSPLP-- 323
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
A K R+E++ +R+ LQ+LV K D ++L +AI Y+KFL QV VL+T
Sbjct: 324 -----AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLST 374
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
++ + RR+RI+E++K LQEL+P +K D +ML++AI Y+K LQLQV+ + + +
Sbjct: 265 LSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQRVQLMQMMSMGC 324
Query: 264 GKAP 267
G P
Sbjct: 325 GMVP 328
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
P+SIA + RR RIS+RLK LQ+LVPN K + ML+ A++Y+K LQ QV+ L D+
Sbjct: 103 PRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQAN 162
Query: 260 PVQGGK 265
GK
Sbjct: 163 CTCSGK 168
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K+L
Sbjct: 295 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKIL 348
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 165 KRPNTGDSMQA-VKKQCAIAATKKTNNKQKTSAPPKD-------------PQSIAAKNRR 210
KRP + A V+ + ++ K NN Q AP ++ S+A + RR
Sbjct: 229 KRPKVEQNNGADVRGKQSVKQAKDNNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRR 288
Query: 211 ERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
E+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 289 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 333
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVL 253
D S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L
Sbjct: 287 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFL 341
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 41/50 (82%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ + RR+RI+E+++ LQEL+P+ +K D +ML++AI Y+K LQ+QV+++
Sbjct: 43 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMM 92
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 40/51 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR +I+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+
Sbjct: 110 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLS 160
>gi|242044912|ref|XP_002460327.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
gi|241923704|gb|EER96848.1| hypothetical protein SORBIDRAFT_02g026530 [Sorghum bicolor]
Length = 261
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 10/95 (10%)
Query: 167 PNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLK 218
P + D+M+ + IAA + + PPK DPQS+AA+ RRERISER++
Sbjct: 136 PTSADAMR--EAIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIR 193
Query: 219 ILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
LQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 194 TLQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSL 228
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 162 SSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQ 221
SSL P D +Q +Q ++A + T P+SIA + RR RIS+RL+ LQ
Sbjct: 278 SSLDMPGMDDYLQL--QQDSVACRVRAKRGCAT-----HPRSIAERERRTRISKRLRRLQ 330
Query: 222 ELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
+LVPN K + ML+ A+ Y+K LQ Q++ L D+
Sbjct: 331 DLVPNMDKQTNTSDMLDIAVDYIKVLQDQIEKLKQDQ 367
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 40/51 (78%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR +I+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L+
Sbjct: 110 LSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLS 160
>gi|226497552|ref|NP_001147658.1| LOC100281267 [Zea mays]
gi|195612888|gb|ACG28274.1| DNA binding protein [Zea mays]
gi|414885734|tpg|DAA61748.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 10/95 (10%)
Query: 167 PNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLK 218
P + D+M+ + IAA + + PPK DPQS+AA+ RRERISER++
Sbjct: 119 PTSADAMR--EAIFHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIR 176
Query: 219 ILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
LQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 177 TLQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSL 211
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RIS+R++ LQELVPN K + MLE+A+ YVK LQ Q++ L
Sbjct: 191 PRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELT 245
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVL 253
D S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFL 321
>gi|15240189|ref|NP_201507.1| transcription factor HEC1 [Arabidopsis thaliana]
gi|75309085|sp|Q9FHA7.1|HEC1_ARATH RecName: Full=Transcription factor HEC1; AltName: Full=Basic
helix-loop-helix protein 88; Short=AtbHLH88; Short=bHLH
88; AltName: Full=Protein HECATE 1; AltName:
Full=Transcription factor EN 118; AltName: Full=bHLH
transcription factor bHLH088
gi|20127097|gb|AAM10961.1|AF488618_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|10177593|dbj|BAB10940.1| unnamed protein product [Arabidopsis thaliana]
gi|110737755|dbj|BAF00816.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332010913|gb|AED98296.1| transcription factor HEC1 [Arabidopsis thaliana]
Length = 241
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 130 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184
>gi|297797671|ref|XP_002866720.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
gi|297312555|gb|EFH42979.1| hypothetical protein ARALYDRAFT_496895 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 130 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184
>gi|356541813|ref|XP_003539367.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 242
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 138 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 192
>gi|255587936|ref|XP_002534446.1| transcription factor, putative [Ricinus communis]
gi|223525277|gb|EEF27938.1| transcription factor, putative [Ricinus communis]
Length = 305
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
S VKK + ATK+ N+ ++ P A K R+E++ +R+ LQ+LV K D
Sbjct: 166 STTTVKKSGSETATKRPRNETASTVP-------AFKVRKEKMGDRITALQQLVSPFGKTD 218
Query: 232 LVTMLEKAISYVKFLQLQVKVLAT 255
++L +AI Y+KFL QV VL+T
Sbjct: 219 TASVLSEAIEYIKFLHEQVTVLST 242
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
SIA K RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 159 HSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 212
>gi|357452535|ref|XP_003596544.1| Transcription factor bHLH123 [Medicago truncatula]
gi|355485592|gb|AES66795.1| Transcription factor bHLH123 [Medicago truncatula]
Length = 437
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 173 MQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDL 232
+ VKK + A K+T N+ ++ P A K R+E++ +R+ LQ+LV K D
Sbjct: 300 VSVVKKSGSEPAPKRTRNETPSTLP-------AFKVRKEKMGDRITALQQLVSPFGKTDT 352
Query: 233 VTMLEKAISYVKFLQLQVKVLAT 255
++L +AI Y+KFL QV VL+T
Sbjct: 353 ASVLSEAIEYIKFLHEQVTVLST 375
>gi|302802899|ref|XP_002983203.1| hypothetical protein SELMODRAFT_445453 [Selaginella moellendorffii]
gi|300148888|gb|EFJ15545.1| hypothetical protein SELMODRAFT_445453 [Selaginella moellendorffii]
Length = 277
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 143 TEATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQ 202
T T +++ + S + +SS N+ +AV+++ +A +N K++ S + +
Sbjct: 157 TGHTPLSEVTRDESSDEITSSFHAENSN---RAVEQEAIVAVASYSNRKRQRSLVVRRRK 213
Query: 203 SIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
+ K R+ERI + +K LQ +VP G +D +L++AI Y+K LQ++V+ L T
Sbjct: 214 EMK-KQRKERIRQTVKALQSIVPGGDSMDPAIVLDEAILYMKVLQMRVRQLET 265
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 39/48 (81%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVK 251
++ + RR+RI+E++K LQEL+P+ +K D +ML++AI Y+K LQLQ++
Sbjct: 321 LSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 368
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RIS+RLK LQ+LVPN K + ML+ A++Y+K LQ QV+ L D+
Sbjct: 166 PRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQ 223
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K+L
Sbjct: 289 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKIL 342
>gi|356496900|ref|XP_003517303.1| PREDICTED: transcription factor HEC1-like [Glycine max]
Length = 251
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 147 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 201
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 310 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQFKTLS 364
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 167 PNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELV 224
P T M A++K Q A K K+ + P+ SIA + RR RISER++ LQELV
Sbjct: 46 PKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPR---SIAERVRRTRISERIRKLQELV 102
Query: 225 PNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
PN K + ML+ A+ Y+K LQ QVK L
Sbjct: 103 PNMDKQTNTADMLDLAVDYIKDLQKQVKGL 132
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RIS+RLK LQ+LVPN K + ML+ A++Y+K LQ QV+ L D+
Sbjct: 319 PRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQ 376
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RIS+RLK LQ+LVPN K + ML+ A++Y+K LQ QV+ L D+
Sbjct: 319 PRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQ 376
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 19/90 (21%)
Query: 184 ATKKTNNKQKTSAPPKDP------------------QSIAAKNRRERISERLKILQELVP 225
A K T K ++ P DP S+A + RRE+ISER+K LQELVP
Sbjct: 344 ANKGTGKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVP 403
Query: 226 NGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 404 GCSKVTGKAVMLDEIINYVQSLQRQVEFLS 433
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 14/99 (14%)
Query: 170 GDSMQAVKKQCAIAATKKTNNKQKTSAPPKD-------------PQSIAAKNRRERISER 216
G +A K A K+ N+ K PPKD S+A + RRE+IS+R
Sbjct: 319 GAKGKAEAKSSGDANQKQNNDSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISKR 378
Query: 217 LKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 379 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 417
>gi|125596454|gb|EAZ36234.1| hypothetical protein OsJ_20554 [Oryza sativa Japonica Group]
Length = 189
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKA 239
+PQS+AA+ RRER+S+R++ LQ LVP G+++D +MLE+A
Sbjct: 123 EPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEA 162
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 39/47 (82%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+ RR+RI+E+++ LQEL+P+ +K D ++L++AI Y+K LQ+QV+V+
Sbjct: 216 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 262
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER++ LQELVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLS 207
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 16/115 (13%)
Query: 156 GSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQ--KTSAPPKD------------- 200
GS+ ++S +PN G+ VK + A ++ +K K PPKD
Sbjct: 322 GSEYSNSKRSKPNEGNENGQVKVEEESKAEEEKQSKSNSKPPEPPKDYIHVRARRGQATD 381
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 382 SHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 436
>gi|359482873|ref|XP_003632856.1| PREDICTED: transcription factor bHLH87-like [Vitis vinifera]
Length = 471
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 47/56 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
DPQ++AA+ RRERISER+++LQ LVP G+K+D +ML++A +Y+KFL+ QVK L T
Sbjct: 371 DPQTVAARQRRERISERIRVLQRLVPGGNKMDTASMLDEAANYLKFLRSQVKALET 426
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 19/90 (21%)
Query: 184 ATKKTNNKQKTSAPPKDP------------------QSIAAKNRRERISERLKILQELVP 225
A K T K ++ P DP S+A + RRE+ISER+K LQELVP
Sbjct: 300 ANKGTGKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVP 359
Query: 226 NGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 360 GCSKVTGKAVMLDEIINYVQSLQRQVEFLS 389
>gi|166428|gb|AAA32663.1| DEL [Antirrhinum majus]
Length = 644
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 14/137 (10%)
Query: 155 SGSQDASSSLKRPNTGDSMQAVKK----------QCAIAATKKTNNKQKTSAPPKDP--- 201
S ++D SS P +G S + +KK + A K+ N + P D
Sbjct: 383 SWNKDGSSGTHVPRSGTSQRFLKKVLFEVARMHENSRLDAGKQKGNSDCLAKPTADEIDR 442
Query: 202 -QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP 260
++ + RRE+I+ER IL LVP+G KVD V++L+ I Y++ L+ +V L +++
Sbjct: 443 NHVLSERKRREKINERFMILASLVPSGGKVDKVSILDHTIDYLRGLERKVDELESNKMVK 502
Query: 261 VQGGKAPDISQVREAID 277
+G ++ +++ +AI+
Sbjct: 503 GRGRESTTKTKLHDAIE 519
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ RR+RI+E++K LQ+LVPN SK D +ML++ I Y+K LQ QV+ ++
Sbjct: 271 RRRRDRINEKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQFMS 318
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER++ LQELVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLS 207
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RIS+R++ LQELVPN K + MLE+A+ YVK LQ Q++ L
Sbjct: 94 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQIEEL 147
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ RR++I++R+K LQ+LVPN SK D +ML++ I Y+K LQ QV +++
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 270
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 39/47 (82%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+ RR+RI+E+++ LQEL+P+ +K D ++L++AI Y+K LQ+QV+V+
Sbjct: 207 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 253
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RIS+R++ LQELVPN K + MLE+A+ YVK LQ Q++ L
Sbjct: 188 PRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQIQELT 242
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K+L
Sbjct: 289 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKIL 342
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER++ LQELVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 152 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLS 207
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K+L
Sbjct: 310 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKIL 363
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV----KVLATDE 257
+++ K RRE+I+++++ L++L+PN +KVD +ML+ AI Y+K L+LQ+ ++++
Sbjct: 341 HNLSEKKRREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLKLQLQANFQIMSMGS 400
Query: 258 -FWPVQGGKAP 267
WP+ G P
Sbjct: 401 GLWPLMMGFRP 411
>gi|147797615|emb|CAN65002.1| hypothetical protein VITISV_023488 [Vitis vinifera]
Length = 447
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 54/75 (72%), Gaps = 5/75 (6%)
Query: 181 AIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAI 240
A+ K+ N + T DPQ++AA+ RRERISER+++LQ LVP G+K+D +ML++A
Sbjct: 333 AVEKPKRKNVRIST-----DPQTVAARQRRERISERIRVLQRLVPGGNKMDTASMLDEAA 387
Query: 241 SYVKFLQLQVKVLAT 255
+Y+KFL+ QVK L T
Sbjct: 388 NYLKFLRSQVKALET 402
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ RR++I++R+K LQ+LVPN SK D +ML++ I Y+K LQ QV +++
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 270
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 39/49 (79%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
+ + RR++I++R++IL+EL+PN +K D +ML+ AI Y+K L+LQ++V
Sbjct: 758 LCERKRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLKLQIQV 806
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 164 LKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQEL 223
L PNT + A++K + + + K P+SIA + RR +ISER++ LQ+L
Sbjct: 304 LSLPNTSAEIAAIEKFLQFSDSVPCKIRAKRGCATH-PRSIAERVRRTKISERMRKLQDL 362
Query: 224 VPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
VPN K + ML+ A+ Y+K LQ QV+ L+
Sbjct: 363 VPNMDKQTNTADMLDLAVDYIKDLQKQVQTLS 394
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER++ LQELVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLS 210
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER++ LQEL PN K + ML+ A+ Y+K LQ QVK L
Sbjct: 343 PRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVKTL 396
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+ RR++I++R+K LQ+LVPN SK D +ML++ I Y+K LQ QV+++
Sbjct: 280 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 326
>gi|302812000|ref|XP_002987688.1| hypothetical protein SELMODRAFT_447051 [Selaginella moellendorffii]
gi|300144580|gb|EFJ11263.1| hypothetical protein SELMODRAFT_447051 [Selaginella moellendorffii]
Length = 268
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 143 TEATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQ 202
T T +++ + S + +SS N S +AV+++ +A +N K++ S + +
Sbjct: 148 TGHTPLSEVTRDESSDEITSSFHAEN---SNRAVEQEAILAVASYSNRKRQRSLVVRRRK 204
Query: 203 SIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
+ K R+ERI + +K LQ +VP G +D +L++AI Y+K LQ++V+ L T
Sbjct: 205 EMK-KQRKERIRQTVKALQSIVPGGDSMDPAIVLDEAILYMKVLQMRVRQLET 256
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 22/106 (20%)
Query: 171 DSMQAVKK--QCAIAATKKTNNKQ-----KTSAPPKD--------------PQSIAAKNR 209
D+++A +K Q + KT+ KQ + S PPK+ S+A + R
Sbjct: 330 DNVEAQQKGDQTPTSTPNKTSGKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVR 389
Query: 210 RERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
RE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 390 REKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 435
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+K LQELVP SK+ + L++ I+YV+ LQ QV+ L+
Sbjct: 141 DSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFLS 196
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER++ LQELVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLS 210
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 7/57 (12%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKVDLVT-------MLEKAISYVKFLQLQV 250
P+SIA + RR RISER++ LQELVPN K V ML++A+ Y+KFLQ QV
Sbjct: 426 PRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYMKFLQKQV 482
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
+ RR+RI++++K LQ+LVPN SK D +ML++ I Y+K LQ QV+V
Sbjct: 285 RKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQV 330
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVL 253
D S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L
Sbjct: 248 DSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 302
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 31/172 (18%)
Query: 113 MEDFNCFDTASNYGFMINNSARDCHGDWLYTEATAVTDTILESGSQDASSSL-------- 164
M F+ +G + NN CHG AT I E S + SS +
Sbjct: 1 MAGFSHLPQQMEHGLITNNGFLFCHGSH-GGAATTTAPAIPEDASMETSSVVLDTSPQDK 59
Query: 165 -KRP--------NTGDSMQAVKKQCAIAATKKTNNKQKTSAP------------PKDPQS 203
++P N+ S +A + K + ++ + AP D S
Sbjct: 60 KRKPREEDTASLNSAHSKEAKENGRKRGGKKHSRDQMEEEAPQGFIHVRARRGQATDSHS 119
Query: 204 IAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
+A + RRERISER+++LQ LVP KV +L++ I+YV+ LQ QV+ L+
Sbjct: 120 LAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 171
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 154 ESGSQDASSSLKR----PNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAAK 207
E+G Q S+ L PNT + A++K Q + + K K+ + P+SIA +
Sbjct: 315 ETGGQTTSAPLAHQMSMPNTTAELAAIEKFLQFSDSVPCKIRAKRGCAT---HPRSIAER 371
Query: 208 NRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
RR +ISER++ LQ+LVPN K + ML+ A+ Y+K LQ QV+ L+
Sbjct: 372 VRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQVETLS 419
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER++ LQELVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 155 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLS 210
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
+++ K++T A + +++ + RR+RI+E+++ LQEL+P+ +K D ++L++ I Y+K
Sbjct: 220 SRRHGPKRRTRA--AEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLK 277
Query: 245 FLQLQVKVL 253
LQ+QV+++
Sbjct: 278 SLQMQVQIM 286
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 281 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYKTLS 335
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER++ LQELVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 162 DSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLS 217
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVK 251
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ QVK
Sbjct: 372 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVK 423
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERIS+R+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 203 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 258
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 259 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 312
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
+++ K++T A + +++ + RR+RI+E+++ LQEL+P+ +K D ++L++ I Y+K
Sbjct: 314 SRRYGTKRRTRA--AEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLK 371
Query: 245 FLQLQVKVL 253
LQ+QV+++
Sbjct: 372 SLQMQVQIM 380
>gi|224088258|ref|XP_002308393.1| predicted protein [Populus trichocarpa]
gi|222854369|gb|EEE91916.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Query: 217 LKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKA 266
+K LQELVPN +K D +ML++ I YVKFLQLQVKVL+ GG A
Sbjct: 1 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL----GGAA 46
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 252 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 305
>gi|223702404|gb|ACN21633.1| putative basic helix-loop-helix protein BHLH9 [Lotus japonicus]
Length = 165
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ K RR RI+E +K LQ L+PN +K D ML++AI Y+K LQLQV++L+
Sbjct: 82 LSGKRRRSRINENMKALQNLIPNSNKTDKAFMLDEAIDYLKQLQLQVQMLS 132
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 299 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEFLS 354
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERIS+R+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 202 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 257
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQ+LVPN K + ML+ A+ Y+K LQ QV+ L+
Sbjct: 349 PRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQVETLS 403
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 259 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 312
>gi|449448090|ref|XP_004141799.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 393
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 46/54 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA+ RRERISER+++LQ LVP GSK+D +ML++A +Y+KFL+ Q+K L
Sbjct: 289 DPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLKSQIKAL 342
>gi|343795733|gb|AEM63394.1| delila2 [Antirrhinum majus]
Length = 644
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 14/137 (10%)
Query: 155 SGSQDASSSLKRPNTGDSMQAVKK----------QCAIAATKKTNNKQKTSAPPKDP--- 201
S ++D S P +G S + +KK + A K+ N + P D
Sbjct: 383 SWNKDGLSGTHGPRSGSSQRLLKKVLFEVARMHENSRLDAGKQKGNNDCLAKPTADEIDR 442
Query: 202 -QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP 260
++ + RRE+I+ER IL LVP+G KVD V++L+ I Y++ L+ +V+ L +++
Sbjct: 443 NHVLSERKRREKINERFMILASLVPSGGKVDKVSILDHTIDYLRGLERKVEELESNKLVK 502
Query: 261 VQGGKAPDISQVREAID 277
+G ++ +++ +AI+
Sbjct: 503 GRGRESTTKTKLHDAIE 519
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
+ RR+RI++++K LQ+LVPN SK D +ML++ I Y+K LQ QV+ ++
Sbjct: 257 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAMSV 305
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 252 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 305
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 281 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQYKTLS 335
>gi|358347412|ref|XP_003637751.1| LAX [Medicago truncatula]
gi|355503686|gb|AES84889.1| LAX [Medicago truncatula]
Length = 298
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 167 PNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPN 226
PN S +A + + AAT K ++K + QSIAA+ RR +I+E+ + L +LVP
Sbjct: 136 PNPFASFEA-EVEPPFAATSKI--EKKVTERTISSQSIAARERRRKITEKTQELGKLVPG 192
Query: 227 GSKVDLVTMLEKAISYVKFLQLQVKVL 253
G K++ ML A +YVKFLQ QV +L
Sbjct: 193 GPKMNTAEMLNAAANYVKFLQAQVGML 219
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 157 SQDASSSLKRPNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERIS 214
SQ S L P T M A++K Q + K K+ + P+SIA + RR RIS
Sbjct: 288 SQILSHHLSLPKTSAEMAAMEKFLQFQDSVPCKIRAKRGCAT---HPRSIAERVRRTRIS 344
Query: 215 ERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
ER++ LQELVPN K + ML+ A+ Y+K LQ Q L
Sbjct: 345 ERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYNTL 384
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 268 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 320
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 265 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 317
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 39/47 (82%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+ RR+RI+E+++ LQEL+P+ +K D ++L++AI Y+K LQ+Q++++
Sbjct: 245 RRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQLQIM 291
>gi|225444197|ref|XP_002270265.1| PREDICTED: transcription factor bHLH52-like [Vitis vinifera]
Length = 283
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
QSIAA+ RR +I+E+ + L +L+P G+K++ M + A YVK+LQ QV +L
Sbjct: 161 QSIAARQRRRKITEKTQELGKLIPGGNKMNTAEMFQAAFKYVKYLQAQVAIL 212
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 157 SQDASSSLKRPNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERIS 214
SQ S L P T M A++K Q + K K+ + P+SIA + RR RIS
Sbjct: 277 SQILSHHLSLPKTSAEMAAMEKFLQFQDSVPCKIRAKRGCAT---HPRSIAERVRRTRIS 333
Query: 215 ERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
ER++ LQELVPN K + ML+ A+ Y+K LQ Q L
Sbjct: 334 ERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYNTL 373
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQ+LVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 354 PRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQFKALS 408
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 17/85 (20%)
Query: 187 KTNNKQKTSAPPKDPQ----------------SIAAKNRRERISERLKILQELVPNGSK- 229
K K TS PP+ P+ S+A + RRE+IS+R+K+LQ+LVP +K
Sbjct: 260 KKQGKDSTSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKV 319
Query: 230 VDLVTMLEKAISYVKFLQLQVKVLA 254
V ML++ I+YV+ LQ QV+ L+
Sbjct: 320 VGKAVMLDEIINYVQSLQRQVEFLS 344
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 175 AVKKQCAIAATKKTN--NKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV-D 231
A KK A AA +KT+ + + D S+A + RRERISER++ LQELVP KV
Sbjct: 132 ARKKPEAAAAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTG 191
Query: 232 LVTMLEKAISYVKFLQLQVKVLA 254
ML++ I+YV+ LQ QV+ L+
Sbjct: 192 KAGMLDEIINYVQSLQKQVEFLS 214
>gi|296089224|emb|CBI38996.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
QSIAA+ RR +I+E+ + L +L+P G+K++ M + A YVK+LQ QV +L
Sbjct: 142 QSIAARQRRRKITEKTQELGKLIPGGNKMNTAEMFQAAFKYVKYLQAQVAIL 193
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 14/83 (16%)
Query: 186 KKTNNKQKTSAPPKD-------------PQSIAAKNRRERISERLKILQELVPNGSK-VD 231
K N+ + + PPKD S+A + RRE+IS+R+K+LQ+LVP +K V
Sbjct: 156 KGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVG 215
Query: 232 LVTMLEKAISYVKFLQLQVKVLA 254
ML++ I+YV+ LQ QV+ L+
Sbjct: 216 KALMLDEIINYVQSLQQQVEFLS 238
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERIS+R+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 213 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 268
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 27/126 (21%)
Query: 156 GSQDASSSLKRPNT-GDSMQAVKKQCAIAA-------TKKTNNKQKTSAPPKD------- 200
S D S+ LKR + G+ ++AVK + A A+ + ++ K TS P+D
Sbjct: 3 ASTDNSAPLKRHKSDGEDVRAVKAEQASASENSGDSISPRSTLKGATSKRPQDFPKQDYI 62
Query: 201 -----------PQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQL 248
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ
Sbjct: 63 HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 122
Query: 249 QVKVLA 254
QV+ L+
Sbjct: 123 QVEFLS 128
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 131 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQVEFLS 186
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 14/83 (16%)
Query: 186 KKTNNKQKTSAPPKD-------------PQSIAAKNRRERISERLKILQELVPNGSK-VD 231
K N+ + + PPKD S+A + RRE+IS+R+K+LQ+LVP +K V
Sbjct: 156 KGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVG 215
Query: 232 LVTMLEKAISYVKFLQLQVKVLA 254
ML++ I+YV+ LQ QV+ L+
Sbjct: 216 KALMLDEIINYVQSLQQQVEFLS 238
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERIS+R+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 203 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 258
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERIS+R+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 203 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 258
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERIS+R+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 213 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 268
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 450 DSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVENLS 505
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 164 LKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK--------------DPQSIAAKNR 209
LK + D + K + ++ K +++ PPK D S+A + R
Sbjct: 110 LKTSGSRDENRDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERAR 169
Query: 210 RERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
RE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 170 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 215
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERIS+R+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 213 DSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 268
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER++ LQEL PN K + ML+ A+ Y+K LQ QVK L
Sbjct: 181 PRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVKTL 234
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 164 LKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQEL 223
L P T M V+K + + K P+SIA + RR RISER++ LQ+L
Sbjct: 324 LSLPKTAGEMATVEKFLQFQGSVPCKIRAKRGFA-THPRSIAERVRRTRISERMRKLQDL 382
Query: 224 VPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
PN K + ML+ A+ Y+K LQ QVK L
Sbjct: 383 FPNMDKQTNTADMLDLAVEYIKDLQKQVKTL 413
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 17/105 (16%)
Query: 165 KRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK--------------DPQSIAAKNRR 210
K NTG V+ A + K + K + PPK D S+A + RR
Sbjct: 55 KNGNTGSKEAEVEASSADGS--KPDKNSKPAEPPKQDYIHVRARRGQATDSHSLAERARR 112
Query: 211 ERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
ERISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 113 ERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQVEFLS 157
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRERISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 245 HSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 298
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 640 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 693
>gi|18402256|ref|NP_566639.1| transcription factor bHLH113 [Arabidopsis thaliana]
gi|75311549|sp|Q9LT67.1|BH113_ARATH RecName: Full=Transcription factor bHLH113; AltName: Full=Basic
helix-loop-helix protein 113; Short=AtbHLH113;
Short=bHLH 113; AltName: Full=Transcription factor EN
61; AltName: Full=bHLH transcription factor bHLH113
gi|11994473|dbj|BAB02475.1| unnamed protein product [Arabidopsis thaliana]
gi|332642727|gb|AEE76248.1| transcription factor bHLH113 [Arabidopsis thaliana]
Length = 270
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 161 SSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKIL 220
SS+ KR TG+ ++ Q K N++K+S AK R+ER+ ER+ L
Sbjct: 117 SSTKKRTGTGNGQES--DQNRKPGKKGKRNQEKSSVG-------IAKVRKERLGERIAAL 167
Query: 221 QELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
Q+LV K D ++L +A+ Y+KFLQ Q++VL +
Sbjct: 168 QQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCS 202
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 268 HSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 321
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 268 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 320
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 300 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 355
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 160 ASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKI 219
++SSL+ P D +Q +Q ++A + T P+SIA + RR RIS+RLK
Sbjct: 128 SNSSLELPGMDDYLQL--QQDSVACRVRARRGCATH-----PRSIAERERRTRISKRLKK 180
Query: 220 LQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
LQ+LVPN K + ML+ A+ Y+K L+ QV+ L D+
Sbjct: 181 LQDLVPNMDKQTNTSDMLDLAVEYIKELKDQVEKLKHDQ 219
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 359 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 414
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER++ LQEL PN K + ML+ A+ ++K LQ QVK L
Sbjct: 347 PRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQVKTL 400
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 18/105 (17%)
Query: 168 NTGDSMQAVKKQCAIAATKKTNNKQK---TSAPPKD--------------PQSIAAKNRR 210
N GD + ++ K + KQ+ +S PPKD S+A + RR
Sbjct: 263 NNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRR 322
Query: 211 ERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
E+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 323 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 367
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLATDEF 258
D S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+ +
Sbjct: 42 DSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQVEFLSM-KL 100
Query: 259 WPVQGGKAPDISQVREA-IDAILSS 282
V+ D QVR+ ++ ++SS
Sbjct: 101 AAVKPALYTDAYQVRKPDVEFLVSS 125
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 367 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 422
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERIS+R+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 199 DSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 254
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQELVP+ K + ML+ A+ Y+K LQ Q K L+
Sbjct: 304 PRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQFKTLS 358
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 395 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 450
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 369 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 422
>gi|356534305|ref|XP_003535697.1| PREDICTED: transcription factor bHLH113-like [Glycine max]
Length = 282
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 167 PNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIA-AKNRRERISERLKILQELVP 225
P + +S+Q K+Q +A + +Q ++P S AK R+E++ ER+ LQ+LV
Sbjct: 117 PKSNNSLQK-KRQEGVAKVGVGSQRQTKKNKAENPTSTGHAKQRKEKLGERIATLQQLVS 175
Query: 226 NGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
K D ++L +A+ Y++FL QV+VL +
Sbjct: 176 PFGKTDTASVLHEAMGYIRFLHDQVQVLCS 205
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 18/105 (17%)
Query: 168 NTGDSMQAVKKQCAIAATKKTNNKQK---TSAPPKD--------------PQSIAAKNRR 210
N GD + ++ K + KQ+ +S PPKD S+A + RR
Sbjct: 262 NNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRR 321
Query: 211 ERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
E+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 322 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 366
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 352 HSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 405
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 18/105 (17%)
Query: 168 NTGDSMQAVKKQCAIAATKKTNNKQK---TSAPPKD--------------PQSIAAKNRR 210
N GD + ++ K + KQ+ +S PPKD S+A + RR
Sbjct: 263 NNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRR 322
Query: 211 ERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
E+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 323 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 367
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 149 TDTILESGSQDAS-------SSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDP 201
T ILES D S L P++ M +++K I + + K P
Sbjct: 318 TSNILESQEADFSFQNLGLTHHLSLPSSSTKMSSIEKFLQIQGSVPCKIRAKRGFA-THP 376
Query: 202 QSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
+SIA + RR RISER+K LQ+L P K ML+ A+ Y+K LQ +VK+L+
Sbjct: 377 RSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQKVKILS 430
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 352 HSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 405
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER++ LQELVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 170 DSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLS 225
>gi|297725985|ref|NP_001175356.1| Os08g0108500 [Oryza sativa Japonica Group]
gi|255678100|dbj|BAH94084.1| Os08g0108500 [Oryza sativa Japonica Group]
Length = 306
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 47/54 (87%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI Y+KFL+ QV+ L
Sbjct: 166 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 219
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPN-GSKVDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQ+LVPN ++ + ML+ A+ Y+K LQ QVK L
Sbjct: 314 PRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKAL 367
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 269 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 322
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+K+LQ LVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 120 DSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLS 175
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+K+LQ LVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 90 DSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLS 145
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPN-GSKVDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQ+LVPN ++ + ML+ A+ Y+K LQ QVK L
Sbjct: 313 PRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKTL 366
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 258 SLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 310
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 43/53 (81%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+++ + RR++I+E+++ L+EL+PN +K+D +ML+ AI Y+K L+LQ+++++
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMS 265
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 43/53 (81%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+++ + RR++I+E+++ L+EL+PN +K+D +ML+ AI Y+K L+LQ+++++
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMS 265
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 322
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 187 HSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFLS 240
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 38/140 (27%)
Query: 130 NNSARDCHGDWLYTEATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTN 189
N A DC G L T SGS+D + DS K + ++ K
Sbjct: 30 GNVANDCDGKRLKT-----------SGSRDENR--------DS----KTEVETSSGKPVE 66
Query: 190 NKQKTSAPPK--------------DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVT 234
+++ PPK D S+A + RRE+ISER+KILQ+LVP +KV
Sbjct: 67 QNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 126
Query: 235 MLEKAISYVKFLQLQVKVLA 254
+L++ I+Y++ LQ QV+ L+
Sbjct: 127 VLDEIINYIQSLQRQVEFLS 146
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 380 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 433
>gi|125601936|gb|EAZ41261.1| hypothetical protein OsJ_25770 [Oryza sativa Japonica Group]
Length = 303
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 47/54 (87%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI Y+KFL+ QV+ L
Sbjct: 163 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 216
>gi|125559887|gb|EAZ05335.1| hypothetical protein OsI_27539 [Oryza sativa Indica Group]
Length = 303
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 47/54 (87%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI Y+KFL+ QV+ L
Sbjct: 163 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQEL 216
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVL 253
D S+A + RRE+I ER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+ L
Sbjct: 265 DSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
>gi|3193326|gb|AAC19308.1| contains similarity to transcriptional activators such as Ra-like
and myc-like regulatory R proteins [Arabidopsis
thaliana]
gi|7267092|emb|CAB80763.1| putative transcriptional regulator [Arabidopsis thaliana]
Length = 329
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 36/46 (78%)
Query: 209 RRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
RR++I++R+K LQ+LVPN SK D +ML++ I Y+K LQ QV +++
Sbjct: 155 RRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 200
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 271 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 324
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER++ LQELVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLS 228
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 271 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 324
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 394 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 449
>gi|219363295|ref|NP_001136892.1| uncharacterized protein LOC100217048 [Zea mays]
gi|194697492|gb|ACF82830.1| unknown [Zea mays]
gi|414589607|tpg|DAA40178.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 242
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KDPQS+AA+ RRERISER++ LQ LVP G+K+D +ML++AI YVKFL+ Q++ L
Sbjct: 166 KDPQSVAARLRRERISERIRALQRLVPGGTKMDTASMLDEAIQYVKFLKSQLQSL 220
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 381 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 436
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 204 IAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDEFWPV 261
++ + RR+RI+E+++ LQELVP +K VD +MLE+ I Y+K LQ+QV+ ++ P+
Sbjct: 227 LSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQAMSMGYMRPM 285
>gi|224061589|ref|XP_002300555.1| predicted protein [Populus trichocarpa]
gi|222847813|gb|EEE85360.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
QSIAA+ RR +I+E+ + L +L+P G+K++ M + A YVKFLQ Q+ +L
Sbjct: 172 QSIAARERRRKITEKTQQLGKLIPGGNKMNTAEMFQAASKYVKFLQAQIGIL 223
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 162 SSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQ 221
SSL+ P D +Q +Q ++A + T P+SIA + RR RIS+RLK LQ
Sbjct: 258 SSLELPGMDDYLQL--QQDSVACRVRARRGCAT-----HPRSIAERERRTRISKRLKKLQ 310
Query: 222 ELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
+LVPN K + ML+ A+ Y+K L+ QV+ L D+
Sbjct: 311 DLVPNMDKQTNTSDMLDLAVDYIKELKDQVEKLKHDQ 347
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 261 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 316
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKV 252
D S+A + RRE+I ER+K+LQ+LVP SKV ML++ I+YV+ LQ QV+V
Sbjct: 265 DSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEV 318
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 35/45 (77%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVK 251
+ RR++I++R+K LQ+LVPN SK D +ML++ I Y+K LQ QV+
Sbjct: 292 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 336
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 313 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 366
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 322
>gi|357453543|ref|XP_003597049.1| Transcription factor bHLH117 [Medicago truncatula]
gi|355486097|gb|AES67300.1| Transcription factor bHLH117 [Medicago truncatula]
Length = 285
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
PQS A+ RR+++SE+ + LQ+L+P ++D T+ E+A YVKFLQ Q+ VL +
Sbjct: 146 PQSNLARQRRQKLSEKTRCLQKLMPWDKRMDQATLYEEAYKYVKFLQAQLSVLQS 200
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 322
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 21/123 (17%)
Query: 147 AVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK------- 199
A T ++ G D KR T +S + + C+ K++ + S PPK
Sbjct: 76 ASTTNAVDEGCGDG----KRVKTSESGKGEGESCSGKPAKQSG--KPPSEPPKQDYIHVR 129
Query: 200 -------DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVK 251
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+
Sbjct: 130 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 189
Query: 252 VLA 254
L+
Sbjct: 190 FLS 192
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 157 SQDASSSLKRPNTGDSMQAVKK--QCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERIS 214
SQ S L P T M A++K Q + K K+ + P+SIA + RR RIS
Sbjct: 163 SQILSHHLSLPKTSAEMAAMEKFLQFQDSVPCKIRAKRGCAT---HPRSIAERVRRTRIS 219
Query: 215 ERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
ER++ LQELVPN K + ML+ A+ Y+K LQ Q L
Sbjct: 220 ERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYNTL 259
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 17/85 (20%)
Query: 187 KTNNKQKTSAPPKDPQ----------------SIAAKNRRERISERLKILQELVPNGSK- 229
K K +S PP+ P+ S+A + RRE+IS+R+K+LQ+LVP +K
Sbjct: 259 KKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKV 318
Query: 230 VDLVTMLEKAISYVKFLQLQVKVLA 254
V ML++ I+YV+ LQ QV+ L+
Sbjct: 319 VGKAVMLDEIINYVQSLQRQVEFLS 343
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER++ LQELVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLS 228
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 328 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 381
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 160 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 215
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 272 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 327
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQ+LVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 292 PRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQFKTLS 346
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RRE+ISER+KILQ+LVP +K + +L++ I+Y++ LQ QV+ L+
Sbjct: 128 DSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLS 183
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 381 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 436
>gi|346682821|gb|AEO45564.1| abscisic acid-responsive protein bHLH2 [Populus koreana]
Length = 297
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
QSIAA+ RR +I+E+ + L +L+P G+K++ M + A YVKFLQ Q+ +L
Sbjct: 171 QSIAARERRRKITEKTQQLGKLIPGGNKMNTAEMFQAASKYVKFLQAQIGIL 222
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 17/85 (20%)
Query: 187 KTNNKQKTSAPPKDPQ----------------SIAAKNRRERISERLKILQELVPNGSK- 229
K K +S PP+ P+ S+A + RRE+IS+R+K+LQ+LVP +K
Sbjct: 257 KKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKV 316
Query: 230 VDLVTMLEKAISYVKFLQLQVKVLA 254
V ML++ I+YV+ LQ QV+ L+
Sbjct: 317 VGKAVMLDEIINYVQSLQRQVEFLS 341
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 276 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 329
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER++ LQELVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 173 DSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLS 228
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 274 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 327
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 264 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 317
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 135 DSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLS 190
>gi|449511629|ref|XP_004164011.1| PREDICTED: transcription factor bHLH110-like [Cucumis sativus]
Length = 427
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 124 NYGFMINNSARDCHGDWLYTEATAVTDTILESGSQDASSSLK-RPNTG-DSMQAVKKQCA 181
N+G + + D H + T I+ S SS+ + +P G +SM++ Q +
Sbjct: 234 NFG-IFKETVSDFHDQIQESPPTGTLPCIIPSKMTTYSSAEECKPKRGCNSMESRLNQQS 292
Query: 182 IAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 241
KK+ + S PP K R+E++ +R+ LQ+LV K D ++L +AI
Sbjct: 293 -PPLKKSRLDSRASCPP-------FKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIG 344
Query: 242 YVKFLQLQVKVLATDEFWPVQGGKA 266
Y+KFLQ QV+ L+ P G KA
Sbjct: 345 YIKFLQNQVETLSVPYMKPAGGNKA 369
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+IS+R+K+LQ+LVP +K V ML++ I+YV+ LQ QV+ L+
Sbjct: 273 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 328
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE 257
+A + RRE+I+E +K LQEL+P +K V+ L+ AI YVK+LQ Q+++++T +
Sbjct: 591 LAERRRREKINENIKTLQELIPRCNKSTKVSTLDDAIEYVKWLQSQIQMMSTGQ 644
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 38/50 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+A + RRE+I+E++K LQEL+P +K V+ L+ AI YVK+LQ Q++++
Sbjct: 145 LAERRRREKINEKMKTLQELIPRCNKSTKVSTLDAAIEYVKWLQSQIQMI 194
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 38/51 (74%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+A + RRE+I+E++K LQEL+P +K V+ LE I Y+K LQ+Q+++++
Sbjct: 1149 LAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDVIEYMKSLQMQIQMMS 1199
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVK 251
+A + RRE+I+E++K LQEL+P +K V+ LE I YVK L++Q++
Sbjct: 1579 LAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDVIEYVKSLEMQIQ 1626
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 232 HSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 285
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQV 250
P+SIA + RR RISER++ LQELVPN K + ML++A+ Y+KFLQ QV
Sbjct: 35 PRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQKQV 85
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+IS+R+K+LQ+LVP +K V ML++ I+YV+ LQ QV+ L+
Sbjct: 273 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 328
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 15/77 (19%)
Query: 193 KTSAPPK--------------DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLE 237
K S PPK D S+A + RRE+ISER+KILQ+LVP +KV +L+
Sbjct: 134 KISEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 193
Query: 238 KAISYVKFLQLQVKVLA 254
+ I+Y++ LQ QV+ L+
Sbjct: 194 EIINYIQSLQRQVEFLS 210
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP+ +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 41 DSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQVEFLS 96
>gi|255644404|gb|ACU22707.1| unknown [Glycine max]
Length = 185
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Query: 163 SLKRPNTGDSMQAVKKQC-AIAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERI 213
S K+ +SM A+++ IA + + ++ PPK DPQS+AA++RRERI
Sbjct: 111 SEKKKKNNNSMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERI 170
Query: 214 SERLKILQELVPNGS 228
SER+KILQ LVP G+
Sbjct: 171 SERIKILQRLVPGGT 185
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 419 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 471
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 177 KKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTM 235
+K+ I TK + + D S+A + RRE+ISER+KILQ+LVP +KV +
Sbjct: 122 QKKLQIEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 181
Query: 236 LEKAISYVKFLQLQVKVLA 254
L++ I+Y++ LQ QV+ L+
Sbjct: 182 LDEIINYIQSLQRQVEFLS 200
>gi|21536756|gb|AAM61088.1| unknown [Arabidopsis thaliana]
Length = 270
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 161 SSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKIL 220
SS+ KR TG+ ++ Q K N+ K+S AK R+ER+ ER+ L
Sbjct: 117 SSTKKRTGTGNGQES--DQNRKPGKKGKRNQDKSSVG-------IAKVRKERLGERIAAL 167
Query: 221 QELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
Q+LV K D ++L +A+ Y+KFLQ Q++VL +
Sbjct: 168 QQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCS 202
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERIS+R+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 194 DSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 249
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+IS+R+K+LQ+LVP +K V ML++ I+YV+ LQ QV+ L+
Sbjct: 261 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 316
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 263 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLS 318
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+IS+R+K+LQ+LVP +K V ML++ I+YV+ LQ QV+ L+
Sbjct: 261 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 316
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 382 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 437
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 253 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 306
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 379 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 432
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 137 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLS 192
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 133 DSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLS 188
>gi|413926619|gb|AFW66551.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 526
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 205 AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGG 264
A + RR++++ERL L+ LVPN SK+D +L AI Y+ LQ QVK L + P G
Sbjct: 268 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGA 327
Query: 265 KAPDI 269
APD+
Sbjct: 328 GAPDV 332
>gi|195638946|gb|ACG38941.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 410
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 205 AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGG 264
A + RR++++ERL L+ LVPN SK+D +L AI Y+ LQ QVK L + P G
Sbjct: 151 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGA 210
Query: 265 KAPDI 269
APD+
Sbjct: 211 GAPDV 215
>gi|194690494|gb|ACF79331.1| unknown [Zea mays]
gi|223947463|gb|ACN27815.1| unknown [Zea mays]
gi|413926617|gb|AFW66549.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 409
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 205 AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGG 264
A + RR++++ERL L+ LVPN SK+D +L AI Y+ LQ QVK L + P G
Sbjct: 151 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGA 210
Query: 265 KAPDI 269
APD+
Sbjct: 211 GAPDV 215
>gi|449438633|ref|XP_004137092.1| PREDICTED: transcription factor bHLH123-like [Cucumis sativus]
gi|449495752|ref|XP_004159934.1| PREDICTED: transcription factor bHLH123-like [Cucumis sativus]
Length = 254
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 182 IAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 241
+AA K+ + K K P+ P S R+E++ ER+ LQ+LV K D ++L +A+
Sbjct: 124 MAAIKEASKKTK----PEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMG 179
Query: 242 YVKFLQLQVKVLAT 255
Y+KFL QV+VL +
Sbjct: 180 YIKFLHEQVQVLCS 193
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 104 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 159
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 38/140 (27%)
Query: 130 NNSARDCHGDWLYTEATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTN 189
N A DC G L T SGS+D + DS K + ++ K
Sbjct: 99 GNVANDCDGKRLKT-----------SGSRDENR--------DS----KTEVETSSGKPVE 135
Query: 190 NKQKTSAPPK--------------DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVT 234
+++ PPK D S+A + RRE+ISER+KILQ+LVP +KV
Sbjct: 136 QNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 195
Query: 235 MLEKAISYVKFLQLQVKVLA 254
+L++ I+Y++ LQ QV+ L+
Sbjct: 196 VLDEIINYIQSLQRQVEFLS 215
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 164 LKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQEL 223
L PNT M A++K + + + K P+SIA + RR +ISER++ LQ+L
Sbjct: 306 LSMPNTSSEMAAMEKFLHFSDSVPMKIRAKRGCATH-PRSIAERVRRTKISERMRKLQDL 364
Query: 224 VPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
VPN K + ML+ A+ Y+K LQ Q + L
Sbjct: 365 VPNMDKQTNTADMLDLAVDYIKDLQKQAQKL 395
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 215 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 268
>gi|224033315|gb|ACN35733.1| unknown [Zea mays]
gi|238015234|gb|ACR38652.1| unknown [Zea mays]
gi|413926622|gb|AFW66554.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413926623|gb|AFW66555.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 594
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 205 AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGG 264
A + RR++++ERL L+ LVPN SK+D +L AI Y+ LQ QVK L + P G
Sbjct: 336 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGA 395
Query: 265 KAPDI 269
APD+
Sbjct: 396 GAPDV 400
>gi|97974133|dbj|BAE94394.1| bHLH transcriptional factor [Ipomoea nil]
Length = 669
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 45/219 (20%)
Query: 74 ANASNLLSFEQNET------KDDEYSMWEGNFNQI----NQKYSSDHR---LMEDFNCFD 120
AS L+ F+ +E+ DD + + +F+ + N + S H+ ++E+F D
Sbjct: 315 VGASELMQFDMSESIRVGTPPDDASTDLDSDFHLLPQMQNPTFLSHHQGAPMLEEFPRED 374
Query: 121 TASNYGFMINNSARDCHGDWL-YTEATAVTDTILESGSQDASSSLKRPNTGDS------- 172
T +Y I++ R G W ++ A D ++ S ASS+ R T S
Sbjct: 375 T--HYSETISSILRHQCGQWSDFSTTVAAADYVVHS----ASSAFSRWTTAASSTCSSHR 428
Query: 173 ---------------MQAVKKQCAIAATKKTNNKQKTSAPPKDP---QSIAAKNRRERIS 214
+ A C A ++K +AP ++P +A + RRE+++
Sbjct: 429 SAQWVLKYTLLTVPFLHAKNSHCGGGADTIPSSKLCKAAPQEEPNVNHVLAERRRREKLN 488
Query: 215 ERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
ER IL+ LVP +K+D ++L I YVK L+ +++ L
Sbjct: 489 ERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQEL 527
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+IS+R+K+LQ+LVP +K V ML++ I+YV+ LQ QV+ L+
Sbjct: 279 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 334
>gi|195629918|gb|ACG36600.1| hypothetical protein [Zea mays]
Length = 409
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 205 AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGG 264
A + RR++++ERL L+ LVPN SK+D +L AI Y+ LQ QVK L + P G
Sbjct: 151 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGA 210
Query: 265 KAPDI 269
APD+
Sbjct: 211 GAPDV 215
>gi|357454723|ref|XP_003597642.1| Transcription factor bHLH87 [Medicago truncatula]
gi|355486690|gb|AES67893.1| Transcription factor bHLH87 [Medicago truncatula]
Length = 392
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 9/105 (8%)
Query: 158 QDASSSLKRPNTGDSMQAVKKQCAIAATKKTNN---------KQKTSAPPKDPQSIAAKN 208
Q +SS + P+ Q + AA + N K+K KDPQ++AA+
Sbjct: 248 QQPNSSFEEPDPEAIAQMKEMIYRAAAFRPVTNLGLEVMEKPKRKNVKISKDPQTVAARQ 307
Query: 209 RRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
RRERISER+++LQ++VP G+K+D +ML++A +Y+KFL+ QVK L
Sbjct: 308 RRERISERIRVLQKIVPGGTKMDTASMLDEAANYLKFLRAQVKEL 352
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 200
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+ RR++I++R+K LQ+LVPN SK D +ML++ I Y+K LQ QV+++
Sbjct: 244 RRRRDKINQRMKELQKLVPNSSKTDKASMLDEVIQYMKQLQAQVQMM 290
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 17/80 (21%)
Query: 192 QKTSAPPKDPQ----------------SIAAKNRRERISERLKILQELVPNGSKV-DLVT 234
+K+S PP+ P+ S+A + RRE+ISER+KILQ+LVP +KV
Sbjct: 154 EKSSQPPEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 213
Query: 235 MLEKAISYVKFLQLQVKVLA 254
+L++ I+Y++ LQ QV+ L+
Sbjct: 214 VLDEIINYIQSLQRQVEFLS 233
>gi|449460283|ref|XP_004147875.1| PREDICTED: transcription factor bHLH110-like [Cucumis sativus]
Length = 458
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 124 NYGFMINNSARDCHGDWLYTEATAVTDTILESGSQDASSSLK-RPNTG-DSMQAVKKQCA 181
N+G + + D H + T I+ S SS+ + +P G +SM++ Q +
Sbjct: 265 NFG-IFKETVSDFHDQIQESPPTGTLPCIIPSKMTTYSSAEECKPKRGCNSMESRLNQQS 323
Query: 182 IAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAIS 241
KK+ + S PP K R+E++ +R+ LQ+LV K D ++L +AI
Sbjct: 324 -PPLKKSRLDSRASCPP-------FKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIG 375
Query: 242 YVKFLQLQVKVLATDEFWPVQGGKA 266
Y+KFLQ QV+ L+ P G KA
Sbjct: 376 YIKFLQNQVETLSVPYMKPAGGNKA 400
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 200
>gi|223974811|gb|ACN31593.1| unknown [Zea mays]
Length = 403
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 205 AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGG 264
A + RR++++ERL L+ LVPN SK+D +L AI Y+ LQ QVK L + P G
Sbjct: 145 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGA 204
Query: 265 KAPDI 269
APD+
Sbjct: 205 GAPDV 209
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 260 HSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 313
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQELVP+ K + ML+ A+ Y+K LQ QVK L
Sbjct: 307 PRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKAL 360
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+I++R+K+LQELVP +K+ +L++ I++V+FLQ QV++L+
Sbjct: 191 DSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFLQRQVEILS 246
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 217 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 270
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQELVP+ K + ML+ A+ Y+K LQ QVK L
Sbjct: 307 PRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKAL 360
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 355 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 410
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 162 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 214
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKVDLVT-MLEKAISYVKFLQLQVKVLA 254
P+S+A + RR RISER++ LQE+VPN K + ML+ A+ Y+K LQ Q+K ++
Sbjct: 253 PRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQLKTMS 307
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 143 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 198
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 378 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 433
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RRE+ISER+K+LQ+LVP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 121 DSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 176
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 148 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 203
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 40 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYKTLS 94
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+KILQ LVP K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 183 DSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQVEFLS 238
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 162 SSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQ 221
S P T M AV++ I + P+SIA + RR RIS +LK LQ
Sbjct: 263 SQFSLPQTTLEMAAVERLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQ 322
Query: 222 ELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
ELVPN K ML+ A+ ++K LQ Q++VL
Sbjct: 323 ELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQVL 355
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 243 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 296
>gi|297834858|ref|XP_002885311.1| hypothetical protein ARALYDRAFT_342085 [Arabidopsis lyrata subsp.
lyrata]
gi|297331151|gb|EFH61570.1| hypothetical protein ARALYDRAFT_342085 [Arabidopsis lyrata subsp.
lyrata]
Length = 270
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 18/94 (19%)
Query: 180 CAIAATKKTNNKQKTSA-----------PPK------DPQSIA-AKNRRERISERLKILQ 221
C + + K++NK++T P K D S+ AK R+ER+ ER+ LQ
Sbjct: 109 CTVDKSPKSSNKKRTGTGNGQEPDQNRKPDKKCKRNQDKSSVGIAKVRKERLGERIAALQ 168
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
+LV K D ++L +A+ Y+KFLQ Q++VL +
Sbjct: 169 QLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCS 202
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+IS+R+K+LQ+LVP +K V ML++ I+YV+ LQ QV+ L+
Sbjct: 289 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 344
>gi|115483366|ref|NP_001065353.1| Os10g0556200 [Oryza sativa Japonica Group]
gi|14165335|gb|AAK55467.1|AC069300_22 putative DNA-binding protein [Oryza sativa Japonica Group]
gi|31433458|gb|AAP54971.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113639885|dbj|BAF27190.1| Os10g0556200 [Oryza sativa Japonica Group]
Length = 191
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 35/44 (79%)
Query: 209 RRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
RR+RI++++K LQ+LVPN SK D +ML++ I Y+K LQ QV+V
Sbjct: 13 RRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQV 56
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 251 HSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 304
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ Q++ L+
Sbjct: 82 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLS 137
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 315 SLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 367
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKV 252
P+SIA + RR RIS +LK LQELVPN K ML+ A+ ++K LQ QV+V
Sbjct: 243 PRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVEV 295
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 68 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 123
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVL 253
D S+A + RR+RISER+K+LQ LVP +K+ ML++ I+YV+ LQ QV+ L
Sbjct: 256 DSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 310
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 162 DSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLS 217
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+IS+R+K+LQ+LVP +K V ML++ I+YV+ LQ QV+ L+
Sbjct: 83 DSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 138
>gi|413926618|gb|AFW66550.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 440
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 205 AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGG 264
A + RR++++ERL L+ LVPN SK+D +L AI Y+ LQ QVK L + P G
Sbjct: 182 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGA 241
Query: 265 KAPDI 269
APD+
Sbjct: 242 GAPDV 246
>gi|194707424|gb|ACF87796.1| unknown [Zea mays]
gi|238014816|gb|ACR38443.1| unknown [Zea mays]
gi|413926620|gb|AFW66552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 557
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 205 AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGG 264
A + RR++++ERL L+ LVPN SK+D +L AI Y+ LQ QVK L + P G
Sbjct: 299 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGA 358
Query: 265 KAPDI 269
APD+
Sbjct: 359 GAPDV 363
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 160 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 215
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKV 252
P+SIA + RR RIS +LK LQELVPN K ML+ A+ ++K LQ QV+V
Sbjct: 241 PRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVEV 293
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 225 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLS 280
>gi|226497322|ref|NP_001142164.1| uncharacterized protein LOC100274330 [Zea mays]
gi|224031213|gb|ACN34682.1| unknown [Zea mays]
gi|413926621|gb|AFW66553.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 625
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 205 AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGG 264
A + RR++++ERL L+ LVPN SK+D +L AI Y+ LQ QVK L + P G
Sbjct: 367 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKALQDELEDPADGA 426
Query: 265 KAPDI 269
APD+
Sbjct: 427 GAPDV 431
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+ RR++I++R+K LQ+LVPN SK D +ML++ I Y+K LQ Q++++
Sbjct: 280 RKRRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQAQLQMI 326
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+M A AI + Q T DP SIA + RRERI+ER++ LQELVP+ +K D
Sbjct: 116 TMPAAPHPPAIRPRVRARRGQAT-----DPHSIAERLRRERIAERIRALQELVPSVNKTD 170
Query: 232 LVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQV 272
ML++ + YVKFL+LQVKVL+ G AP ++ +
Sbjct: 171 RAAMLDEIVDYVKFLRLQVKVLSMSRLG-GAGAVAPLVTDI 210
>gi|356546916|ref|XP_003541866.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 460
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
+S VKK A K+T N+ + P A K R+E++ +R+ LQ+LV K
Sbjct: 321 ESGTVVKKSGNEPAPKRTRNESPSPLP-------AFKVRKEKMGDRITALQQLVSPFGKT 373
Query: 231 DLVTMLEKAISYVKFLQLQVKVLAT 255
D ++L +AI Y+KFL QV L+T
Sbjct: 374 DTASVLSEAIEYIKFLHEQVTALST 398
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 23/121 (19%)
Query: 150 DTILESGSQDASSSLK-RPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK--------- 199
D ++ GS+D S + PNT KK C T + K S K
Sbjct: 142 DKRIKIGSEDGESKITGNPNT-------KKNCVAEDTSNSKENSKVSDVQKTDYIHVRAR 194
Query: 200 -----DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVL 253
D S+A + RRE+ISER+K LQ+LVP +K+ ML++ I+YV+ LQ QV+ L
Sbjct: 195 RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFL 254
Query: 254 A 254
+
Sbjct: 255 S 255
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 23/121 (19%)
Query: 150 DTILESGSQDASSSLK-RPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK--------- 199
D ++ GS+D S + PNT KK C T + K S K
Sbjct: 142 DKRIKIGSEDGESKITGNPNT-------KKNCVAEDTSNSKENSKVSDVQKTDYIHVRAR 194
Query: 200 -----DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVL 253
D S+A + RRE+ISER+K LQ+LVP +K+ ML++ I+YV+ LQ QV+ L
Sbjct: 195 RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFL 254
Query: 254 A 254
+
Sbjct: 255 S 255
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 155 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 210
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQELVP K ML+ A+ Y+K LQ Q K L+
Sbjct: 313 PRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQFKTLS 367
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RIS R+K LQ+L P K ML+ A+ Y+K LQ QVK+L
Sbjct: 370 PRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQVKIL 423
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQELVP+ K + ML+ A+ Y+K LQ QVK L
Sbjct: 204 PRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKAL 257
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLAT 255
S+A + RRE+ISER+K+LQ+LVP +KV +LE I+YV+ LQ QV++L+
Sbjct: 123 HSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQSLQSQVEILSV 177
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 165 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 218
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 185 HSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLS 238
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP SK+ MLE+ I+YV+ LQ Q++ L+
Sbjct: 15 DSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQIEFLS 70
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ Q++ L+
Sbjct: 85 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLS 140
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 153 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 208
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVK-----VLA 254
P+SIA + RR +ISER++ LQELVPN K + ML+ A+ Y+K LQ QVK L
Sbjct: 298 PRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQVKNSKASSLG 357
Query: 255 TDEFWPVQGGKAPD-----ISQVREAI 276
++ + + G+ D I Q+R AI
Sbjct: 358 IEKDFVLAKGQVTDESIEAIDQLRVAI 384
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRERISER+K LQ+LVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 257 HSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLS 310
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 35/45 (77%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVK 251
+ RR++I++R+K LQ+LVPN +K D +ML++ I Y+K LQ QV+
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 35/45 (77%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVK 251
+ RR++I++R+K LQ+LVPN +K D +ML++ I Y+K LQ QV+
Sbjct: 303 RKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|255538730|ref|XP_002510430.1| transcription factor, putative [Ricinus communis]
gi|223551131|gb|EEF52617.1| transcription factor, putative [Ricinus communis]
Length = 436
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 165 KRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELV 224
KRP G S+ K AA KK+ + + S PP K R+E++ +R+ LQ+LV
Sbjct: 288 KRP--GSSLMEPKATLQ-AAPKKSRLETRASCPP-------FKVRKEKLGDRIAALQQLV 337
Query: 225 PNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
K D ++L +AI Y+KFLQ QV+ L+
Sbjct: 338 APFGKTDTASVLMEAIGYIKFLQNQVETLS 367
>gi|224067023|ref|XP_002302331.1| predicted protein [Populus trichocarpa]
gi|222844057|gb|EEE81604.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATD 256
+S+ + R+ERI E + ILQ L+P G D V +LE+AI Y+K L+ + K L D
Sbjct: 312 ESVNKRMRKERIRETVSILQNLIPGGKGKDAVIVLEEAIQYLKSLKFEAKALGLD 366
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 147 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 202
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+M A AI + Q T DP SIA + RRERI+ER++ LQELVP+ +K D
Sbjct: 116 TMPAAPHPPAIRPRVRARRGQAT-----DPHSIAERLRRERIAERIRALQELVPSVNKTD 170
Query: 232 LVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQV 272
ML++ + YVKFL+LQVKVL+ G AP ++ +
Sbjct: 171 RAAMLDEIVDYVKFLRLQVKVLSMSRLG-GAGAVAPLVTDI 210
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP KV ML++ I+YV+ LQ Q++ L+
Sbjct: 234 HSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLS 287
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 14/79 (17%)
Query: 190 NKQKTSAPPKD-------------PQSIAAKNRRERISERLKILQELVPNGSKV-DLVTM 235
N K PPKD S+A + RRE+I ER+K+LQ+LVP +KV M
Sbjct: 287 NNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALM 346
Query: 236 LEKAISYVKFLQLQVKVLA 254
L++ I+YV+ LQ QV+ L+
Sbjct: 347 LDEIINYVQSLQRQVEFLS 365
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 146 TAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIA 205
+ V + E + DAS LK G A + A+ K + + D S+A
Sbjct: 115 SPVKPKVEEVAASDASVELKAQKKGKGKTA---KPAVEPPKDYVHVRARRGQATDSHSLA 171
Query: 206 AKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
+ RRE+IS+R+K LQ+LVP +K V ML++ I+YV+ LQ QV+ L+
Sbjct: 172 ERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLS 221
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 14/79 (17%)
Query: 190 NKQKTSAPPKD-------------PQSIAAKNRRERISERLKILQELVPNGSKV-DLVTM 235
N K PPKD S+A + RRE+I ER+K+LQ+LVP +KV M
Sbjct: 287 NNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALM 346
Query: 236 LEKAISYVKFLQLQVKVLA 254
L++ I+YV+ LQ QV+ L+
Sbjct: 347 LDEIINYVQSLQRQVEFLS 365
>gi|326530726|dbj|BAK01161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 238
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 14/126 (11%)
Query: 136 CHGDWLYTEATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTS 195
H +++ + V D +G+ SS ++ D+M+ + IAA + + +
Sbjct: 92 VHQEYVVSPGAVVFDG--PTGAPQGYSSSP--SSSDAMREMIFH--IAALQPVDIDPEAV 145
Query: 196 APP--------KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQ 247
PP KDPQS+AA+ RRERISER+++LQ LVP G+K+D +ML++AI YVKFL+
Sbjct: 146 RPPKRRNVRTSKDPQSVAARLRRERISERIRVLQRLVPGGTKMDTASMLDEAIHYVKFLK 205
Query: 248 LQVKVL 253
QV+ L
Sbjct: 206 SQVQSL 211
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 146 TAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIA 205
+ V + E + DAS LK G A + A+ K + + D S+A
Sbjct: 115 SPVKPKVEEVAASDASVELKAQKKGKGKTA---KPAVEPPKDYVHVRARRGQATDSHSLA 171
Query: 206 AKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
+ RRE+IS+R+K LQ+LVP +K V ML++ I+YV+ LQ QV+ L+
Sbjct: 172 ERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLS 221
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RRE+ISER+K LQ+LVP K+ ML++ I+YV+ LQ Q++ L+
Sbjct: 178 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLS 233
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVK 251
D S+A + RRE+ISER+K LQ+LVP KV ML++ I+YV+FLQ QV+
Sbjct: 15 DSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQVE 67
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP KV ML++ I+YV+ LQ Q++ L+
Sbjct: 183 HSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLS 236
>gi|118486843|gb|ABK95256.1| unknown [Populus trichocarpa]
Length = 467
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
DS+ VKK C A + + AP P K R+E++ +R+ LQ+LV K
Sbjct: 328 DSVSVVKKGCEPAFKRP-----RIEAPSPLP---TFKVRKEKLGDRITALQQLVSPFGKT 379
Query: 231 DLVTMLEKAISYVKFLQLQVKVLATDEFW---PVQGGKAPD 268
D ++L +AI Y+KFL Q VL+T P+Q +AP+
Sbjct: 380 DTASVLHEAIEYIKFLHDQATVLSTPYMKNGNPIQHQQAPE 420
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RRE+ISER+K LQ+LVP K+ ML++ I+YV+ LQ Q++ L+
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLS 236
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 151 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 206
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 146 TAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIA 205
+ V + E + DAS LK G A + A+ K + + D S+A
Sbjct: 115 SPVKPKVEEVAASDASVELKAQKKGKGKTA---KPAVEPPKDYVHVRARRGQATDSHSLA 171
Query: 206 AKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
+ RRE+IS+R+K LQ+LVP +K V ML++ I+YV+ LQ QV+ L+
Sbjct: 172 ERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLS 221
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP KV ML++ I+YV+ LQ Q++ L+
Sbjct: 179 HSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLS 232
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
+A + RRE+I+ER+K LQ+L+P +K V+MLE I YVK L++Q+
Sbjct: 157 LAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQI 203
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKV 252
P+SIA + RR RIS +LK LQELVPN K ML+ A+ ++K LQ QV+V
Sbjct: 243 PRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVEV 295
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RRE+ISER+K LQ+LVP K+ ML++ I+YV+ LQ Q++ L+
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLS 236
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 139 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 194
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 35/42 (83%)
Query: 213 ISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
I+ER++ LQEL+PN +K D +ML++AI Y+K LQLQ+++++
Sbjct: 445 INERMRALQELIPNCNKADKASMLDEAIEYLKSLQLQLQIMS 486
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 146 TAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIA 205
+ V + E + DAS LK G A + A+ K + + D S+A
Sbjct: 115 SPVKPKVEEVAASDASVELKAQKKGKGKTA---KPAVEPPKDYVHVRARRGQATDSHSLA 171
Query: 206 AKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
+ RRE+IS+R+K LQ+LVP +K V ML++ I+YV+ LQ QV+ L+
Sbjct: 172 ERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLS 221
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 166 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 221
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RIS +LK LQELVPN K ML+ A+ ++K LQ QV+ L
Sbjct: 241 PRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVESL 294
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 270 HSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLS 323
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 19/85 (22%)
Query: 189 NNKQK--TSAPPKDPQ----------------SIAAKNRRERISERLKILQELVPNGSKV 230
N+KQK S PP+ P+ S+A + RRE+ISER+K LQ+LVP +KV
Sbjct: 7 NHKQKKDNSNPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKV 66
Query: 231 -DLVTMLEKAISYVKFLQLQVKVLA 254
ML++ I+YV+ LQ QV+ L+
Sbjct: 67 TGKAVMLDEIINYVQSLQRQVEFLS 91
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RRE+ISER+K LQ+LVP K+ ML++ I+YV+ LQ Q++ L+
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLS 236
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 156 DSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLS 211
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 174 HSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 227
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 316 HSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLS 369
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 20/96 (20%)
Query: 179 QCAIAATKKTNNK-----QKTSAPP--------------KDPQSIAAKNRRERISERLKI 219
+ I A+ NNK K S PP D S+A + RRERI ER+KI
Sbjct: 112 RAEIEASSAANNKPAEPSSKPSEPPMQDYIHVRSRRGQATDSHSLAERARRERIGERMKI 171
Query: 220 LQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
LQ+LVP +KV L++ I+Y++ LQ QV+ L+
Sbjct: 172 LQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFLS 207
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 162 SSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQ 221
SS+K P + + +Q I + Q T DP SIA + RRERI+ER++ LQ
Sbjct: 115 SSMKPPMSQPAPPMPHQQSTIRPRVRARRGQAT-----DPHSIAERLRRERIAERIRSLQ 169
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQV 272
ELVP +K D M+++ + YVKFL+LQVKVL+ G AP ++++
Sbjct: 170 ELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLG-GAGAVAPLVTEM 219
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D +A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 160 DSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 215
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+++LQ LVP KV +L++ I+YV+ LQ QV+ L+
Sbjct: 118 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 173
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 200
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 194 DSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLS 249
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ LVP KV ML++ ISYV+ LQ QV+ L+
Sbjct: 189 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLS 244
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 8/68 (11%)
Query: 204 IAAKNRRERISERLKILQEL--VPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPV 261
++ + RR+RI+E+++ LQEL +P+ +K D +ML++AI Y+K LQLQ++V+ W +
Sbjct: 173 LSERRRRDRINEKMRALQELELIPHCNKTDKASMLDEAIEYLKSLQLQLRVM-----W-M 226
Query: 262 QGGKAPDI 269
G AP +
Sbjct: 227 GSGMAPPL 234
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 200
>gi|356542232|ref|XP_003539573.1| PREDICTED: transcription factor bHLH123-like [Glycine max]
Length = 339
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
+S VKK A K+T N+ + P A K R+E++ +R+ LQ+LV K
Sbjct: 200 ESGTVVKKSGNEPAPKRTRNETPSPLP-------AFKVRKEKMGDRITALQQLVSPFGKT 252
Query: 231 DLVTMLEKAISYVKFLQLQVKVLAT 255
D ++L +AI Y+KFL QV L+T
Sbjct: 253 DTASVLSEAIEYIKFLHEQVTALST 277
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 181 DSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLS 236
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP SK+ ML++ I+YV+ LQ Q++ L+
Sbjct: 78 DSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFLS 133
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 173 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLS 228
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 180 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 235
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 144 DSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEFLS 199
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RRE+ISER+K LQ+LVP K+ ML++ I+YV+ LQ Q++ L+
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLS 236
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 220 DSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEFLS 275
>gi|357476085|ref|XP_003608328.1| Transcription factor bHLH25 [Medicago truncatula]
gi|355509383|gb|AES90525.1| Transcription factor bHLH25 [Medicago truncatula]
Length = 327
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
TKK + K S P IA + RRE++S+R L LVP K+D VT+L AI Y+K
Sbjct: 138 TKKVATRPKLSLP--QDHIIAERKRREKLSQRFIALSALVPGLQKMDKVTVLGDAIKYLK 195
Query: 245 FLQLQVKVLATDE 257
LQ +VKVL ++
Sbjct: 196 KLQEKVKVLEEEQ 208
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 258 DSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 313
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ LVP KV ML++ ISYV+ LQ QV+ L+
Sbjct: 189 DSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLS 244
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKVDLVT-MLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RISE+L+ LQ LVPN K + ML+ A+ ++K LQ Q++ L D+
Sbjct: 295 PRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLKEDK 352
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 20/115 (17%)
Query: 155 SGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK--------------D 200
SGSQD + +LK D+ + K ++++Q PPK D
Sbjct: 55 SGSQDQNGALKAGEV-DATSVAGNKLPEQTAKPSSSEQ----PPKQDYIHVRARRGQATD 109
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+KILQ++VP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 110 SHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLS 164
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+I ER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 308 DSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 363
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 88 SLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 140
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 30/132 (22%)
Query: 138 GDWLYTEATAVTDTILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAP 197
G W +EA++ S+++ P G V + KK K++ P
Sbjct: 98 GVWAMSEASS------------GPSTVRHPWAGGVRLRVNGVLPGHSGKKVKKKEQ---P 142
Query: 198 PK--------------DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISY 242
PK D S+A + RRE+IS R+K LQ LVP S+V MLE+ I+Y
Sbjct: 143 PKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINY 202
Query: 243 VKFLQLQVKVLA 254
VK LQ Q++ L+
Sbjct: 203 VKSLQRQIEFLS 214
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 56 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 111
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 35/45 (77%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVK 251
+ RR++I++R+K LQ+LVPN SK D +ML++ I Y+K LQ QV+
Sbjct: 38 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 82
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 200
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+++LQ LVP KV +L++ I+YV+ LQ QV+ L+
Sbjct: 120 DNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 175
>gi|224117892|ref|XP_002317694.1| predicted protein [Populus trichocarpa]
gi|222860759|gb|EEE98306.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
QSIAA+ RR +I+E+ + L + +P G K++ M + A YVKFLQ Q+ +L
Sbjct: 173 QSIAARERRRKITEKTRELGKFIPGGHKMNTAEMFQAASKYVKFLQAQIGIL 224
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RR++ISER+K+LQ+LVP SK+ ML++ I+YV+ LQ QV+ L+
Sbjct: 150 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLS 202
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+++LQ LVP KV +L++ I+YV+ LQ QV+ L+
Sbjct: 120 DNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 175
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 258 DSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 313
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+M A A+ + Q T DP SIA + RRERI+ER++ LQELVP+ +K D
Sbjct: 121 TMPAAPHPPAMRPRVRARRGQAT-----DPHSIAERLRRERIAERIRALQELVPSVNKTD 175
Query: 232 LVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQV 272
ML++ + YVKFL+LQVKVL+ G AP ++ +
Sbjct: 176 RAAMLDEIVDYVKFLRLQVKVLSMSRLG-GAGAVAPLVTDI 215
>gi|222619489|gb|EEE55621.1| hypothetical protein OsJ_03959 [Oryza sativa Japonica Group]
Length = 166
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE 237
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D +++
Sbjct: 16 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTAALVQ 53
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVL 253
D S+A + RRE+ISER+KILQ+LVP +KV ++L++ I+Y++ LQ QV+ +
Sbjct: 137 DSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFM 191
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 91 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 143
>gi|255573099|ref|XP_002527479.1| transcription factor, putative [Ricinus communis]
gi|223533119|gb|EEF34877.1| transcription factor, putative [Ricinus communis]
Length = 239
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 179 QCA---IAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM 235
QC+ IA T++T+ K K P Q K R+E++ ER+ LQ+LV K D ++
Sbjct: 101 QCSTNPIAKTQRTSKKTKMENPTSTGQ---PKIRKEKLGERINALQQLVSPFGKTDTASV 157
Query: 236 LEKAISYVKFLQLQVKVLAT 255
L +A+ Y++FL QV+VL +
Sbjct: 158 LHEAMGYIRFLHDQVQVLCS 177
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RR +I+ERLK LQ++VP K + + TML++ I+YV+ LQ QV+ L+
Sbjct: 156 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLS 211
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RISE+L+ LQ LVPN K ML+ A+ ++K LQ Q++ L D+
Sbjct: 144 PRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLKEDK 201
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 138 DSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLS 193
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 83 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 138
>gi|449467128|ref|XP_004151277.1| PREDICTED: transcription factor bHLH123-like [Cucumis sativus]
Length = 433
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 183 AATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISY 242
AA K+ N+ + P A K R+E++ +R+ LQ+LV K D ++L +AI Y
Sbjct: 302 AAAKRPRNETPSPLP-------AFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEY 354
Query: 243 VKFLQLQVKVLAT 255
+KFL QV VL+T
Sbjct: 355 IKFLHEQVSVLST 367
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+I+ER+KILQ+LVP +KV ++L++ I+YV+ L+ QV+ L+
Sbjct: 123 DSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVEFLS 178
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER+K LQ+L P K ML+ A+ ++K LQ QV++L+
Sbjct: 371 PRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQVQILS 425
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RR +I+ERLK LQ++VP K + + TML++ I+YV+ LQ QV+ L+
Sbjct: 156 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLS 211
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RR++ISER+K+LQ+LVP SK+ ML++ I+YV+ LQ QV+ L+
Sbjct: 158 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLS 210
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 200
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 203 SIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RR++ISER+K+LQ+LVP SK+ ML++ I+YV+ LQ QV+ L+
Sbjct: 152 SLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLS 204
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 20/114 (17%)
Query: 155 SGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK--------------D 200
SGSQD + +LK D+ + K ++++Q PPK D
Sbjct: 55 SGSQDQNGALKAGEV-DATSVAGNKLPEQTAKPSSSEQ----PPKQDYIHVRARRGQATD 109
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVL 253
S+A + RRE+ISER+KILQ++VP +KV +L++ I+Y++ LQ QV+ L
Sbjct: 110 SHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFL 163
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+I ER+K+LQ LVP+ +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 267 DSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQRQVEFLS 322
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPN-GSKVDLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP K ML++ I+YV+ LQ QV+ L+
Sbjct: 242 HSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFLS 295
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV----LATDEFWPV 261
K RR +I+ERLK LQ+LVP SK + + L++ I Y+K LQ QV+ LA+ +PV
Sbjct: 174 KRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAMSVGLASPAVYPV 232
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 173 DSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLS 228
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDEF 258
D SIA + RR +I+ERLK LQ++VP K + + TML++ I+YV+ LQ QV EF
Sbjct: 158 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQV------EF 211
Query: 259 WPVQGGKAPDISQVREAIDAILSSQR 284
++ A DA+ S QR
Sbjct: 212 LSMKLTAASSYYDFNSETDAVESMQR 237
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 397 DSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQVESLS 452
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP+ SKV ML++ I+YV+ LQ Q++ L+
Sbjct: 34 DSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYVQSLQRQIEFLS 89
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RR +I+ERLK LQ++VP K + + TML++ I+YV+ LQ QV+ L+
Sbjct: 145 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLS 200
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+++LQ LVP KV +L++ I+YV+ LQ QV+ L+
Sbjct: 120 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLS 175
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 100 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLS 155
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 63 DSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVESLS 118
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 152 ILESGSQDASSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRE 211
IL S + S P+T M V K I + P+SIA + RR
Sbjct: 169 ILHSLNSALESQFNLPHTSLEMSTVDKLLHIPEDSVPCKIRAKRGCATHPRSIAERERRT 228
Query: 212 RISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
RIS +LK LQ+LVPN K ML+ A+ ++K LQ QV+ L
Sbjct: 229 RISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQVQKL 271
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISE+L+ LQELVPN K ML+ A+ ++K LQ Q++ L
Sbjct: 151 PRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQLQAL 204
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR +ISER+K LQ+LVP+ K + ML++ + YVK LQ QV+ L+
Sbjct: 393 PRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQRQVQELS 447
>gi|4519201|dbj|BAA75514.1| MYC-GP [Perilla frutescens]
Length = 620
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ + RRE+ISER IL LVP+G KVD V++L+ I Y++ L+ +VK L
Sbjct: 425 LSERKRREKISERFSILVSLVPSGGKVDKVSILDHTIEYLRELERKVKDL 474
>gi|4519199|dbj|BAA75513.1| MYC-RP [Perilla frutescens]
Length = 620
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
++ + RRE+ISER IL LVP+G KVD V++L+ I Y++ L+ +VK L
Sbjct: 425 LSERKRREKISERFSILVSLVPSGGKVDKVSILDHTIEYLRELERKVKDL 474
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RISER++ LQ+LVPN K + ML+ A+ Y+K LQ QV+ L+
Sbjct: 42 PRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQVQTLS 96
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 246 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 301
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+ +LQ+LVP +++ ML++ I+YV+ LQ QV+ L+
Sbjct: 203 DSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLS 258
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 25/143 (17%)
Query: 137 HGDWLYTEATAVTDTILESGSQDA---------SSSLKRPNTGDSMQAVKKQCAIAATKK 187
H D L T T T+ ++ S D+ +SS P S KK+ + +KK
Sbjct: 74 HPDILSTATVVHTVTLNQNDSHDSKKRKSMEQSTSSYISPTA--STNETKKKNNLGGSKK 131
Query: 188 TNNKQKTS-------------APPKDPQSIAAKNRRERISERLKILQELVPNGSK-VDLV 233
NK+K D SIA + RRE+I+ +L+ LQ+LVP + + +
Sbjct: 132 GENKEKEGDKAEEVIHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMA 191
Query: 234 TMLEKAISYVKFLQLQVKVLATD 256
MLE+ I+YV LQ QV+ L+ +
Sbjct: 192 VMLEEIINYVHSLQNQVEFLSME 214
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+++LQ LVP KV +L++ I+YV+ LQ QV+ L+
Sbjct: 129 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLS 184
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ Q++ L D+
Sbjct: 293 PRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQ 350
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ++VP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 146 DSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 201
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 19/143 (13%)
Query: 113 MEDFNCFDTASNYGFMINNSARDCHGDWLYTEATAVTDTILESGSQDASSSLKRPNTGDS 172
M F+ +G + NN CHG AT I E S + SS + + D
Sbjct: 1 MAGFSHLPQQMEHGLITNNGFLFCHGSH-GGAATTTAPAIPEDASMETSSVVLDTSPQD- 58
Query: 173 MQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV-D 231
KK +++ +A S +K RRERISER+++LQ LVP KV
Sbjct: 59 -------------KKRKPREEDTA---SLNSAHSKVRRERISERMRMLQALVPGCDKVTG 102
Query: 232 LVTMLEKAISYVKFLQLQVKVLA 254
+L++ I+YV+ LQ QV+ L+
Sbjct: 103 KALILDEIINYVQSLQNQVEFLS 125
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM-LEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+++LQ LVP KV M L++ I+YV+ LQ QV+ L+
Sbjct: 140 DSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQVEFLS 195
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+++LQ LVP KV +L++ I+YV+ LQ QV+ L+
Sbjct: 130 DSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLS 185
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ Q++ L D+
Sbjct: 293 PRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQ 350
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+ +LQ+LVP +++ ML++ I+YV+ LQ QV+ L+
Sbjct: 200 DSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLS 255
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RIS R+K LQ+L P K ML+ A+ Y+K LQ QVK+L
Sbjct: 366 PRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQVKML 419
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ++VP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 150 DSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVEFLS 205
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQEL P +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 217 HSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 270
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+L P +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 123 DSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 178
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 161 SSSLKRPNTGDSMQAV----KKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISER 216
+S++K G MQA AI + Q T DP SIA + RRERI+ER
Sbjct: 98 ASTVKNAFHGQPMQATVAAAPHPPAIRPRVRARRGQAT-----DPHSIAERLRRERIAER 152
Query: 217 LKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQV 272
++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+ G AP ++ +
Sbjct: 153 IRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG-GAGAVAPLVTDI 207
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 178 KQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE 237
+Q +I + Q T DP SIA + RRERI+ER++ LQELVP SK D M++
Sbjct: 142 QQSSIRPRVRARRGQAT-----DPHSIAERLRRERIAERIRALQELVPTVSKTDRAAMID 196
Query: 238 KAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQV 272
+ + YVKFL+LQVKVL+ G AP ++++
Sbjct: 197 EIVDYVKFLRLQVKVLSMSRLGGA-GAVAPLVTEM 230
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+ ILQ+LVP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 140 DSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 195
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 265 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 320
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ Q++ L D+
Sbjct: 288 PRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQ 345
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER++ LQ LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 145 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLS 200
>gi|224126245|ref|XP_002319791.1| predicted protein [Populus trichocarpa]
gi|222858167|gb|EEE95714.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 171 DSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
DS AVKK + AATK+ N+ +S P + K R+E++ +R+ LQ+L
Sbjct: 311 DSNIAVKKSGSEAATKRPRNEIPSSLP-------SFKVRKEKMGDRITALQQLT------ 357
Query: 231 DLVTMLEKAISYVKFLQLQVKVLAT 255
D ++L +AI Y+KFL QV V +T
Sbjct: 358 DTASVLSEAIEYIKFLHQQVTVFST 382
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
DP SIA + RRERI+ER++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 132 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAVMLDEIVDYVKFLRLQVKVLSMSRL 190
>gi|45735905|dbj|BAD12937.1| bHLH transcription factor (bHLH123)-like protein [Oryza sativa
Japonica Group]
Length = 418
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
P S+AAK R+E++ +R+ LQ+LV K D ++L + I Y+KFL QV L
Sbjct: 294 PASLAAKVRKEKLGDRVTALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGAL 346
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM-LEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ LVP K+ T+ L++ I+YVK LQ QV+ L
Sbjct: 117 DSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQVEFLV 172
>gi|414865353|tpg|DAA43910.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 296
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 29/32 (90%)
Query: 228 SKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
++VD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 242 ARVDISTMLEEAVQYVKFLQLQIKLLSSDDMW 273
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 163 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG 222
Query: 260 PVQGGKAPDISQV 272
G AP ++ +
Sbjct: 223 GA-GAVAPLVTDI 234
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+I ER+K+LQ+LVP +K+ M+++ I+YV+ LQ QV+ L+
Sbjct: 227 DRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQVEFLS 282
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ++VP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 59 DSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLS 114
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RR++ISER+K+LQ+LVP SK+ ML++ I+YV+ LQ QV+ L+
Sbjct: 117 HSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLS 170
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP SKV ML++ I+YV+ LQ QV+ L+
Sbjct: 25 DSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 80
>gi|242080775|ref|XP_002445156.1| hypothetical protein SORBIDRAFT_07g004980 [Sorghum bicolor]
gi|241941506|gb|EES14651.1| hypothetical protein SORBIDRAFT_07g004980 [Sorghum bicolor]
Length = 411
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 170 GDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSK 229
GDS + K+ A T K +T P P K R+E++ +R+ LQ+LV K
Sbjct: 266 GDSSNIIAKRTNTAPTPPPLKKSRTGTPSPLP---TFKVRKEKLGDRITALQQLVSPFGK 322
Query: 230 VDLVTMLEKAISYVKFLQLQVKVLA 254
D ++L + I Y+KFL QV L+
Sbjct: 323 TDTASVLHETIEYIKFLHEQVGSLS 347
>gi|242037067|ref|XP_002465928.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
gi|241919782|gb|EER92926.1| hypothetical protein SORBIDRAFT_01g048400 [Sorghum bicolor]
Length = 287
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
Q AA+ RR+RISE+ L L+P K++ MLE+A +VK LQ QV VLA
Sbjct: 155 QKSAARQRRKRISEKTAELARLIPGAHKLNTAEMLEEAARHVKLLQAQVGVLA 207
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Query: 206 AKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV----LATDEFWPV 261
A+ RR +I+ERLK LQ+LVP SK + + L++ I Y+K LQ QV+ LA+ +PV
Sbjct: 222 AQRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAMSVGLASPAVYPV 281
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATD 256
P+SIA + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 275 PRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQTQVQKLHED 331
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RIS+RLK LQ+LVPN K + ML+ A+ Y+K L+ +V+ L D+
Sbjct: 291 PRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDRVEKLKHDQ 348
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 131 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG 190
Query: 260 PVQGGKAPDISQV 272
G AP ++ +
Sbjct: 191 -GAGAVAPLVTDI 202
>gi|242063834|ref|XP_002453206.1| hypothetical protein SORBIDRAFT_04g001650 [Sorghum bicolor]
gi|241933037|gb|EES06182.1| hypothetical protein SORBIDRAFT_04g001650 [Sorghum bicolor]
Length = 448
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
+A + RR+++++RL L+ LVPN SK+D ++L AI Y+ LQ QVK L + P G
Sbjct: 188 VAERRRRKKLNDRLYKLRSLVPNISKMDRASILGDAIDYIVGLQNQVKALQDELEDPADG 247
Query: 264 GKAPDI 269
G APD+
Sbjct: 248 G-APDV 252
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 146 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG 205
Query: 260 PVQGGKAPDISQV 272
G AP ++ +
Sbjct: 206 -GAGAVAPLVTDI 217
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRERISER+++LQ LVP KV +L++ I+YV+ LQ QV+ L+
Sbjct: 134 DSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 189
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ++VP +KV ++L++ I+Y++ LQ QV+ L+
Sbjct: 132 DSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLS 187
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 132 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG 191
Query: 260 PVQGGKAPDISQV 272
G AP ++ +
Sbjct: 192 -GAGAVAPLVTDI 203
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 129 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLG 188
Query: 260 PVQGGKAPDISQV 272
G AP ++ +
Sbjct: 189 -GAGAVAPLVTDI 200
>gi|356574284|ref|XP_003555279.1| PREDICTED: transcription factor bHLH113-like [Glycine max]
Length = 277
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 161 SSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIA-AKNRRERISERLKI 219
S+SL++ G ++V K + + ++T + ++P S AK R+E++ ER+
Sbjct: 111 SNSLQKKRNGMGQESVTK-VGVGSQRQTKKNKA-----ENPTSTGHAKQRKEKLGERIAA 164
Query: 220 LQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
LQ+LV SK D ++L +A+ Y++FL QV+VL +
Sbjct: 165 LQQLVSPFSKTDTASVLHEAMGYIRFLHDQVQVLCS 200
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER++ LQELVP +K D M+++ + YVKFL+LQVKVL+
Sbjct: 155 DPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLG 214
Query: 260 PVQGGKAPDIS 270
V G AP ++
Sbjct: 215 GV-GAVAPLVT 224
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 8/59 (13%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKV--------DLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E++K LQEL+P +K+ D +ML++AI Y+K LQLQV++
Sbjct: 65 LSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAIEYLKTLQLQVQIFV 123
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 176 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 231
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+L+P +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 201 DSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFLS 256
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+LVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 154 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 209
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 30/87 (34%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV------------------------DLV-- 233
D S+A + RRE+ISER+K+LQ+LVP SKV DLV
Sbjct: 287 DSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTHAYFNFQRLLDLVKV 346
Query: 234 ----TMLEKAISYVKFLQLQVKVLATD 256
ML++ I+YV+ LQ QV+V A D
Sbjct: 347 TGKAVMLDEIINYVQSLQCQVEVRAYD 373
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 34/41 (82%)
Query: 213 ISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
I+ER+K LQEL+P+ SK D ++L++AI Y+K LQLQ++V+
Sbjct: 272 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 312
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+I++R+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 305 DSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQHQVEFLS 360
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K LQ+L+P +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 201 DSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQVEFLS 256
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.125 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,316,516,202
Number of Sequences: 23463169
Number of extensions: 167945998
Number of successful extensions: 442705
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2329
Number of HSP's successfully gapped in prelim test: 532
Number of HSP's that attempted gapping in prelim test: 439414
Number of HSP's gapped (non-prelim): 3175
length of query: 291
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 150
effective length of database: 9,050,888,538
effective search space: 1357633280700
effective search space used: 1357633280700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 76 (33.9 bits)