BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038918
(291 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 204 bits (519), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 165/267 (61%), Gaps = 37/267 (13%)
Query: 45 NSNGYEFHNAEEARDSLINFKSGHDHFMHANASNLLSFEQNE------TKDDEYSMWEGN 98
N+ G+ F+ + E + H+ M NAS+ +F+ + T + + +GN
Sbjct: 49 NNQGFVFYPSGETIED-------HNSLMDFNASSFFTFDNHRSLISPVTNGGAFPVVDGN 101
Query: 99 FNQINQKYSSDH------RLMEDFNCFDTASNYGFMINNSARDC----HGDWLYTEATAV 148
+ +S R+++ N F+T S++G N+ ++ +GDWLY+ +T
Sbjct: 102 MSYSYDGWSHHQVDSISPRVIKTPNSFETTSSFGLTSNSMSKPATNHGNGDWLYSGST-- 159
Query: 149 TDTILESGSQDASSSLK-----RPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQS 203
I+ GS+ S+S K RP TG++ Q KK + K K K + PKDPQS
Sbjct: 160 ---IVNIGSRHESTSPKLAGNKRPFTGENTQLSKKPSSGTNGKI---KPKATTSPKDPQS 213
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQG 263
+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKAI YVKFLQ+QVKVLA DEFWP QG
Sbjct: 214 LAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFWPAQG 273
Query: 264 GKAPDISQVREAIDAIL-SSQRDRSSS 289
GKAPDISQV+EAIDAIL SSQRD +S+
Sbjct: 274 GKAPDISQVKEAIDAILSSSQRDSNST 300
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/234 (51%), Positives = 148/234 (63%), Gaps = 9/234 (3%)
Query: 61 LINFKSGHDH---FMHANASNLLSFEQNETKDDEYSMWEGNFNQINQKYSSDHRLMEDFN 117
+ + SG DH M N S+ L+F+ +E+ G+ + + + F
Sbjct: 63 FVFYPSGEDHHNSLMDFNGSSFLNFDHHESFPPPAISCGGSSGGGGFSFLEGNNMSYGFT 122
Query: 118 CFDTASNYGFMINNSARDCHG--DWLYTEATAVTDTILESGSQDASSSLKRPNTGDSMQA 175
++ + + S G DWLY+++T VT S+ KR +TG+S Q
Sbjct: 123 NWNHQHHMDIISPRSTETPQGQKDWLYSDSTVVTTGSRNESLSPKSAGNKRSHTGESTQP 182
Query: 176 VKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTM 235
KK + T KT K TS PKDPQS+AAKNRRERISERLKILQELVPNG+KVDLVTM
Sbjct: 183 SKK-LSSGVTGKTKPKPTTS--PKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTM 239
Query: 236 LEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAIL-SSQRDRSS 288
LEKAISYVKFLQ+QVKVLATDEFWP QGGKAPDISQV++AIDAIL SSQRDR+S
Sbjct: 240 LEKAISYVKFLQVQVKVLATDEFWPAQGGKAPDISQVKDAIDAILSSSQRDRNS 293
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 246 DPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 305
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 54/60 (90%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 275 DPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 334
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%)
Query: 194 TSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
T DPQS+ A+ RRE+I+ERLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L
Sbjct: 170 TKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 229
Query: 254 ATDEFW 259
++D+ W
Sbjct: 230 SSDDLW 235
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 52/60 (86%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DPQS+ A+ RRERI++RLK LQ LVPNG+KVD+ TMLE A+ YVKFLQLQ+K+L++++ W
Sbjct: 141 DPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLW 200
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 62/105 (59%), Gaps = 17/105 (16%)
Query: 184 ATKKTNNKQKTSAPPK-------------DPQSIAAKNRRERISERLKILQELVPNGSKV 230
A+ T +APP+ DP SIA + RRERI+ER+K LQELVPNG+K
Sbjct: 118 ASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT 177
Query: 231 DLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREA 275
D +ML++ I YVKFLQLQVKVL+ GG A SQ+ EA
Sbjct: 178 DKASMLDEIIDYVKFLQLQVKVLSMSRL----GGAASVSSQISEA 218
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
Query: 174 QAVKKQCAIAATKKTNNKQKTSA---PPKDPQSIAAKNRRERISERLKILQELVPNGSKV 230
QA AT + K K A DP SIA + RRERI+ER+K LQELVPNG+K
Sbjct: 110 QATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT 169
Query: 231 DLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVRE 274
D +ML++ I YVKFLQLQVKVL+ GG A SQ+ E
Sbjct: 170 DKASMLDEIIDYVKFLQLQVKVLSMSRL----GGAASASSQISE 209
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 185 TKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVK 244
T T + TS DPQS+AA++RR RIS+R KILQ +VP G+K+D V+ML++AISYVK
Sbjct: 31 TGNTKRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVK 90
Query: 245 FLQLQV 250
FL+ Q+
Sbjct: 91 FLKAQI 96
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 167 PNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPK-----DPQSIAAKNRRERISERLKILQ 221
P G S + ++ Q ++ T +QK + DP SIA + RRERI+ER+K LQ
Sbjct: 71 PTMG-SQEGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQ 129
Query: 222 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEF 258
ELVPN +K D +ML++ I YV+FLQLQVKVL+
Sbjct: 130 ELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRL 166
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKV 252
DPQS+AA+ RR RIS+R ++L+ LVP GSK+D V+MLE+AI YVKFL+ QV +
Sbjct: 43 DPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTL 95
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 46/54 (85%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++AA+ RRERISE++++LQ LVP G+K+D +ML++A +Y+KFL+ QVK L
Sbjct: 278 DPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 45/54 (83%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
DPQ++ A+ RRERISE+++IL+ +VP G+K+D +ML++AI Y KFL+ QV++L
Sbjct: 121 DPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 174
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+E+++ LQEL+PN +KVD +ML++AI Y+K LQLQV++++
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMS 400
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 41/51 (80%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR+RI+ER+K LQEL+P +K D +ML++AI Y+K LQLQ+++++
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMS 341
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+++ K RR RI+E++K LQ L+PN +K D +ML++AI Y+K LQLQV++L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
++ K RR +I+E++K LQ+L+PN +K D +ML++AI Y+K LQLQV+ LA
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 151
>sp|Q9SND4|HEC2_ARATH Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1
Length = 231
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 10/91 (10%)
Query: 182 IAATKKTNNKQKTSAPPK--------DPQSIAAKNRRERISERLKILQELVPNGSKVDLV 233
IA + + ++ PPK DPQS+AA++RRERISER++ILQ LVP G+K+D
Sbjct: 102 IAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 161
Query: 234 TMLEKAISYVKFLQLQVKVLATDEFWPVQGG 264
+ML++AI YVKFL+ QV+ L +E V GG
Sbjct: 162 SMLDEAIHYVKFLKKQVQSL--EEHAVVNGG 190
>sp|Q9LXD8|HEC3_ARATH Transcription factor HEC3 OS=Arabidopsis thaliana GN=HEC3 PE=1 SV=1
Length = 224
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Query: 172 SMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVD 231
+MQ+V A K N + + DPQS+AA++RRERISER++ILQ LVP G+K+D
Sbjct: 104 AMQSVDIDPATVKKPKRRNVRISD----DPQSVAARHRRERISERIRILQRLVPGGTKMD 159
Query: 232 LVTMLEKAISYVKFLQLQVKVL 253
+ML++AI YVKFL+ Q+++L
Sbjct: 160 TASMLDEAIRYVKFLKRQIRLL 181
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RIS+R++ LQELVPN K + MLE+A+ YVK LQ Q++ L ++
Sbjct: 194 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQ 251
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
P+SIA + RR RIS+R++ LQELVPN K + MLE+A+ YVK LQ Q++ L
Sbjct: 191 PRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELT 245
>sp|Q9FHA7|HEC1_ARATH Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1
Length = 241
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 199 KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
KDPQS+AA++RRERISER++ILQ LVP G+K+D +ML++AI YVKFL+ QV+ L
Sbjct: 130 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
+ RR++I++R+K LQ+LVPN SK D +ML++ I Y+K LQ QV +++
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 270
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K+L
Sbjct: 289 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKIL 342
>sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113
PE=2 SV=1
Length = 270
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 161 SSSLKRPNTGDSMQAVKKQCAIAATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKIL 220
SS+ KR TG+ ++ Q K N++K+S AK R+ER+ ER+ L
Sbjct: 117 SSTKKRTGTGNGQES--DQNRKPGKKGKRNQEKSSVG-------IAKVRKERLGERIAAL 167
Query: 221 QELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
Q+LV K D ++L +A+ Y+KFLQ Q++VL +
Sbjct: 168 QQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCS 202
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 18/105 (17%)
Query: 168 NTGDSMQAVKKQCAIAATKKTNNKQK---TSAPPKD--------------PQSIAAKNRR 210
N GD + ++ K + KQ+ +S PPKD S+A + RR
Sbjct: 263 NNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRR 322
Query: 211 ERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
E+ISER+K LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 323 EKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 367
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPN-GSKVDLVTMLEKAISYVKFLQLQVKVL 253
P+SIA + RR +ISER++ LQ+LVPN ++ + ML+ A+ Y+K LQ QVK L
Sbjct: 314 PRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKAL 367
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVD-LVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+K+LQ+LVP +KV ML++ I+YV+ LQ QV+ L+
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 322
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+++LQELVP +K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 217 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 270
>sp|Q9ZW81|BH129_ARATH Transcription factor bHLH129 OS=Arabidopsis thaliana GN=BHLH129
PE=2 SV=2
Length = 297
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKV 252
P+SIA + RR RIS +LK LQELVPN K ML+ A+ ++K LQ QV+V
Sbjct: 243 PRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVEV 295
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 202 QSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
S+A + RRE+ISER+K LQ+LVP KV ML++ I+YV+ LQ Q++ L+
Sbjct: 234 HSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLS 287
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 14/79 (17%)
Query: 190 NKQKTSAPPKD-------------PQSIAAKNRRERISERLKILQELVPNGSKV-DLVTM 235
N K PPKD S+A + RRE+I ER+K+LQ+LVP +KV M
Sbjct: 287 NNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALM 346
Query: 236 LEKAISYVKFLQLQVKVLA 254
L++ I+YV+ LQ QV+ L+
Sbjct: 347 LDEIINYVQSLQRQVEFLS 365
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 250
+A + RRE+I+ER+K LQ+L+P +K V+MLE I YVK L++Q+
Sbjct: 157 LAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQI 203
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RRE+ISER+K LQ+LVP K+ ML++ I+YV+ LQ Q++ L+
Sbjct: 181 DSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLS 236
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D SIA + RR +I+ERLK LQ++VP K + + TML++ I+YV+ LQ QV+ L+
Sbjct: 156 DSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLS 211
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+KILQ+LVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 145 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 200
>sp|Q8H102|BH128_ARATH Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128
PE=1 SV=1
Length = 362
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 201 PQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDE 257
P+SIA + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ Q++ L D+
Sbjct: 293 PRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQ 350
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER+ +LQ+LVP +++ ML++ I+YV+ LQ QV+ L+
Sbjct: 200 DSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLS 255
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+ISER++ LQ LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 145 DSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLS 200
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 34/41 (82%)
Query: 213 ISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
I+ER+K LQEL+P+ SK D ++L++AI Y+K LQLQ++V+
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis thaliana GN=HFR1 PE=1 SV=1
Length = 292
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 38/49 (77%)
Query: 207 KNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 255
+ R E++S +++ LQ+LVPN K D V++L+K I Y+K LQLQ+++++T
Sbjct: 144 RRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMST 192
>sp|Q9SFZ3|BH110_ARATH Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110
PE=2 SV=2
Length = 453
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 184 ATKKTNNKQKTSAPPKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYV 243
A+KK + ++S PP K R+E++ +R+ LQ+LV K D ++L +AI Y+
Sbjct: 316 ASKKPRVESRSSCPP-------FKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYI 368
Query: 244 KFLQLQVKVLAT 255
KFLQ Q++ L+
Sbjct: 369 KFLQSQIETLSV 380
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 254
D S+A + RRE+I+ERLK LQ+LVP K + + ML+ I YV+ LQ Q++ L+
Sbjct: 113 DSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLS 168
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDEF 258
D S+A + RR +I+ERL+ LQ++VP K + + TML++ I+YV+ LQ QV EF
Sbjct: 154 DSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQV------EF 207
Query: 259 WPVQGGKAPDISQVREAIDAILSSQR 284
++ A DA+ S QR
Sbjct: 208 LSMKLTAASSFYDFNSETDAVDSMQR 233
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 43/55 (78%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
DP SIA + RRERI+ER++ LQELVP +K D M+++ + YVKFL+LQVKVL+
Sbjct: 155 DPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLS 209
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
+A + RRE+I+E++K LQ+L+P +K V+ L+ AI YVK LQ Q++ +
Sbjct: 262 LAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM 311
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 200 DPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 259
DP SIA + RRERI+ER++ LQELVP +K D M+++ + YVKFL+LQVKVL+
Sbjct: 153 DPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLG 212
Query: 260 PVQGGKAPDISQV 272
G AP ++++
Sbjct: 213 -GAGAVAPLVTEM 224
>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
Length = 444
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 34/41 (82%)
Query: 213 ISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
I+ER+K LQEL+P+ S+ D ++L++AI Y+K LQ+Q++V+
Sbjct: 272 INERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVM 312
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 205 AAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVL 253
A + RRE++++R L+ +VPN SK+D ++L AISY+K LQ +VK++
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIM 447
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 204 IAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 254
++ + RR++I+E +K LQEL+P +K D +ML+ I YVK LQ Q+++ +
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFS 334
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,831,491
Number of Sequences: 539616
Number of extensions: 4026037
Number of successful extensions: 11333
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 11111
Number of HSP's gapped (non-prelim): 269
length of query: 291
length of database: 191,569,459
effective HSP length: 116
effective length of query: 175
effective length of database: 128,974,003
effective search space: 22570450525
effective search space used: 22570450525
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)