BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038921
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6
PE=1 SV=1
Length = 327
Score = 200 bits (508), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 138/205 (67%), Gaps = 19/205 (9%)
Query: 1 MDEMCGFNSTGDKGSCW------ENLVFPTSHEYDYSSSPLVYPGRIP-TFGSDELLSAA 53
MD M F+S GD E+L+FP+ ++ SS R+ FGSDELLS A
Sbjct: 1 MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSS--AGENRVSDVFGSDELLSVA 58
Query: 54 ASAISEAAAPISSTPPPHPHPQEIQPPEVEDVSTVIKAKIASHPCYPRLLEAYIDCQKVG 113
SA+S AA I+ EI+ + TVIKAKIA HP YPRLL+AYIDCQKVG
Sbjct: 59 VSALSSEAASIAP---------EIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVG 109
Query: 114 APPEIAYLLDAIRSEKDLYRRDSVPT-CFGADPELDEFMETYSDMLAKYKSDLARPFDEA 172
APPEIA LL+ I+ E D+Y+++ VP+ CFGADPELDEFMETY D+L KYKSDLARPFDEA
Sbjct: 110 APPEIACLLEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEA 169
Query: 173 TTFLNKVELQLRNLCTTTASVRSLS 197
T FLNK+E+QLRNLCT S R +S
Sbjct: 170 TCFLNKIEMQLRNLCTGVESARGVS 194
>sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2
PE=1 SV=3
Length = 310
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 127/199 (63%), Gaps = 23/199 (11%)
Query: 1 MDEMCGFNSTGDKGSCWENLVFPTSHEYDYSSSPLVYPG-RIPTFGSDELLSAAASAISE 59
MD MCGF ST D L+ P+ DY S G FGSDEL A+A+S
Sbjct: 1 MDRMCGFRSTEDYSEK-ATLMMPS----DYQSLICSTTGDNQRLFGSDEL----ATALSS 51
Query: 60 AAAPISSTPPPHPHPQEIQPPEVEDVSTVIKAKIASHPCYPRLLEAYIDCQKVGAPPEIA 119
P I+ E +VIK+KIASHP YPRLL+ YIDCQKVGAP EIA
Sbjct: 52 ELLP------------RIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIA 99
Query: 120 YLLDAIRSEKDLYRRDSVP-TCFGADPELDEFMETYSDMLAKYKSDLARPFDEATTFLNK 178
+L+ I+ E +Y+RD P +CFGADPELDEFMETY D+L KYK+DLARPFDEATTF+NK
Sbjct: 100 CILEEIQRENHVYKRDVAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINK 159
Query: 179 VELQLRNLCTTTASVRSLS 197
+E+QL+NLCT AS +LS
Sbjct: 160 IEMQLQNLCTGPASATALS 178
>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica
GN=OSH6 PE=2 SV=1
Length = 301
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 74/109 (67%)
Query: 84 DVSTVIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGA 143
D++ ++KA+IA HP YP LL AYI+C+KVGAPPE+A LL I E+ G
Sbjct: 38 DLTELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQIGV 97
Query: 144 DPELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNLCTTTAS 192
DPELDEFME Y +L +YK +L+RPFDEA +FL+ ++ QL NLC+ S
Sbjct: 98 DPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGATS 146
>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica
GN=OSH1 PE=2 SV=2
Length = 361
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 89 IKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGA-DPEL 147
IKAKI SHP Y LL AY+DCQKVGAPPE+A L A+ + +L +R ++ A +PEL
Sbjct: 104 IKAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRTALGVLGAATEPEL 163
Query: 148 DEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNLCTTTASVRSL 196
D+FME Y +ML KY+ +L RP EA FL +VE QL L + S+R++
Sbjct: 164 DQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNTLSISGRSLRNI 212
>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1
Length = 364
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 90/152 (59%), Gaps = 10/152 (6%)
Query: 46 SDELLSAAASAISEAAAPISSTPPPHPHPQEIQPPEVEDVSTVIKAKIASHPCYPRLLEA 105
S+ +L A ++ EA A + P + +++ IKAKI SHP Y LL A
Sbjct: 74 SNPVLQLANGSLLEACAKAAKEPSSSSYAADVE---------AIKAKIISHPHYSSLLAA 124
Query: 106 YIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGA-DPELDEFMETYSDMLAKYKSD 164
Y+DCQKVGAPPE++ L A+ + +L +R ++ A +PELD+FME Y +ML KY+ +
Sbjct: 125 YLDCQKVGAPPEVSARLTAVAQDLELRQRTALGGLGTATEPELDQFMEAYHEMLVKYREE 184
Query: 165 LARPFDEATTFLNKVELQLRNLCTTTASVRSL 196
L RP EA FL +VE QL +L + S+R++
Sbjct: 185 LTRPLQEAMEFLRRVETQLNSLSISGRSLRNI 216
>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica
GN=OSH10 PE=2 SV=1
Length = 337
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 62/101 (61%)
Query: 83 EDVSTVIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFG 142
E + IKAKI SHP YP LL A+IDCQKVGAPPE+ L A+ E D D
Sbjct: 56 ERETDAIKAKIMSHPLYPALLRAFIDCQKVGAPPEVVGRLSALAGELDSRAEDRYLQGQS 115
Query: 143 ADPELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQL 183
+DPELDEFMETY DML Y+ +L RP EA F +E Q+
Sbjct: 116 SDPELDEFMETYIDMLVSYRQELTRPIQEADQFFRNMEAQI 156
>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1
Length = 355
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 84 DVSTVIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTC-FG 142
+V +KAKI +HP LL+AY+DCQKVGAPPE+A L A+R E + +R S+
Sbjct: 89 EVIEALKAKIIAHPQCSNLLDAYMDCQKVGAPPEVAARLSAVRQEFEARQRRSLTDRDVS 148
Query: 143 ADPELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNLCT 188
DPELD+FME Y DML KY+ +L RP EA F+ K+E QL L
Sbjct: 149 KDPELDQFMEAYYDMLVKYREELTRPLQEAMEFMQKIEAQLNMLGN 194
>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1
PE=1 SV=1
Length = 398
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 72/110 (65%), Gaps = 3/110 (2%)
Query: 82 VEDVSTVIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCF 141
V DV +KAKI +HP Y LL+AY+DCQK+GAPP++ + A R + + ++ S P+
Sbjct: 128 VSDVE-AMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVS 186
Query: 142 GA--DPELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNLCTT 189
+ DPELD+FME Y DML KY+ +L RP EA F+ ++E QL LC +
Sbjct: 187 ASSRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQS 236
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Query: 88 VIKAKIASHPCYPRLLEAYIDCQKVGAPPEI-AYLLDAIRSEKDLYRRDSVP--TCFGAD 144
+KAKI +HP Y RLL AY++CQKVGAPPE+ A L +A S + D+ +C G D
Sbjct: 123 AVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGED 182
Query: 145 PELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNLCTTTASVRS 195
P LD+FME Y +ML KY+ +L++P EA FL ++E Q +NL +++ S
Sbjct: 183 PALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDFAS 233
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
Length = 359
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 88 VIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGA-DPE 146
IKAKI SHP Y LL AY++C KVGAPPE++ L I E + +R ++ A +PE
Sbjct: 103 AIKAKIISHPHYYSLLTAYLECNKVGAPPEVSARLTEIAQEVEARQRTALGGLAAATEPE 162
Query: 147 LDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNLCTTTASVRSL 196
LD+FME Y +ML K++ +L RP EA F+ +VE QL +L + S+R++
Sbjct: 163 LDQFMEAYHEMLVKFREELTRPLQEAMEFMRRVESQLNSLSISGRSLRNI 212
>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM
PE=1 SV=2
Length = 382
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 77 IQPPEVEDVSTVIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDS 136
I P S +KAKI +HP Y RLL AY++CQKVGAPPE+ L+ S
Sbjct: 109 INPCSSSSSSASVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASM 168
Query: 137 VPT-CFGADPELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLR 184
PT C G DP LD+FME Y +ML KY+ +L++PF EA FL +VE Q +
Sbjct: 169 GPTGCLGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFK 217
>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica
GN=OSH71 PE=2 SV=1
Length = 311
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 84 DVSTVIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGA 143
D++ ++KA+IA HP YP LL AYI+C+KVGAPPE+ LL+ I E +
Sbjct: 50 DLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGATAGGEIG 109
Query: 144 -DPELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNLC 187
DPELDEFMETY +L +YK +L RPFDEA +FL + QL +LC
Sbjct: 110 LDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLC 154
>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica
GN=OSH71 PE=2 SV=2
Length = 311
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 84 DVSTVIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGA 143
D++ ++KA+IA HP YP LL AYI+C+KVGAPPE+ LL+ I E +
Sbjct: 50 DLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGATAGGEIG 109
Query: 144 -DPELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNLC 187
DPELDEFMETY +L +YK +L RPFDEA +FL + QL +LC
Sbjct: 110 LDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLC 154
>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1
Length = 397
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 88 VIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTC-FGADPE 146
IKAKI +HP Y LLEAY+DCQ+VGAP ++ L R E + +R S + DPE
Sbjct: 131 AIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLSVARQEFEARQRSSGTSRETSKDPE 190
Query: 147 LDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNLCTTT 190
LD+FME Y DML KY+ +L RP EA F+ ++E QL L
Sbjct: 191 LDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNN 234
>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1
Length = 398
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 88 VIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTC-FGADPE 146
IKAKI +HP Y L+EAY+DCQ+VGAP ++ L R E + +R S + DPE
Sbjct: 132 AIKAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLSVARQEFEARQRSSGTSRETSKDPE 191
Query: 147 LDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNLCTTT 190
LD+FME Y DML KY+ +L RP EA F+ ++E QL L
Sbjct: 192 LDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNN 235
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
PE=2 SV=1
Length = 383
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 86 STVIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPT-CFGAD 144
S ++KAKI +HP Y RLL AY++CQKVGAPPE+ L+ S PT G D
Sbjct: 120 SLLVKAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSSAAAAAASMGPTGSLGED 179
Query: 145 PELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLR 184
P LD+FME Y +ML KY+ +L++PF EA FL VE Q +
Sbjct: 180 PGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFK 219
>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica
GN=OSH15 PE=2 SV=1
Length = 355
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 9/98 (9%)
Query: 89 IKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLY---RRDSVPTCFGADP 145
IKAKI +HP Y LL AY+DCQKVGAPPE+ L A ++ D R D+ DP
Sbjct: 91 IKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDA------RDP 144
Query: 146 ELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQL 183
ELD+FME Y +MLAKY+ +L RP DEA FL +VE QL
Sbjct: 145 ELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQL 182
>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica
GN=OSH15 PE=2 SV=2
Length = 355
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 9/98 (9%)
Query: 89 IKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLY---RRDSVPTCFGADP 145
IKAKI +HP Y LL AY+DCQKVGAPPE+ L A ++ D R D+ DP
Sbjct: 91 IKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDA------RDP 144
Query: 146 ELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQL 183
ELD+FME Y +MLAKY+ +L RP DEA FL +VE QL
Sbjct: 145 ELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQL 182
>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp.
japonica GN=Os03g0673500 PE=3 SV=1
Length = 337
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 10/113 (8%)
Query: 82 VEDVSTVIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDL--YRRDSVPT 139
++ +IKAKI SHP YP LL A++DC+KVGAPPE+ L ++ D+ Y D
Sbjct: 64 LQSSEAMIKAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSSLAVVTDVPQYSGDR--- 120
Query: 140 CF-----GADPELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNLC 187
C ADPELD+FMETY ML +Y +LARP EA F +E Q+ +L
Sbjct: 121 CLPAQQPAADPELDQFMETYCYMLTRYGQELARPIQEAEEFFRGIEEQIDSLA 173
>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1
Length = 351
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 95 SHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGADPELDEFMETY 154
+HP Y LL AY+DCQKVGAPP++ L A+ ++ D + DPELD+FME Y
Sbjct: 96 AHPQYSALLAAYLDCQKVGAPPDVLERLTAMAAKLDA---SAAGRHEPRDPELDQFMEAY 152
Query: 155 SDMLAKYKSDLARPFDEATTFLNKVELQL 183
+ML KY+ +L RP DEA FL +VE QL
Sbjct: 153 CNMLVKYREELTRPIDEAMEFLKRVEAQL 181
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum
GN=LET6 PE=2 SV=1
Length = 355
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 95 SHPCYPRLLEAYIDCQKVGAPPEIAYLLDAI---RSEKDLYRRDSVPTCFGADPELDEFM 151
+HP Y RLL AY++CQK+GAPPE+ L+ I + S G DP LD+FM
Sbjct: 102 AHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQFM 161
Query: 152 ETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNL 186
E Y +ML KY+ +L++PF EA FL+++E Q + L
Sbjct: 162 EAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKAL 196
>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica
GN=OSH43 PE=2 SV=1
Length = 341
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 10/115 (8%)
Query: 88 VIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGA---- 143
+KA+I SHP Y LL AY+ C+KVGAPP++ L A+ + + L D P
Sbjct: 82 AVKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQLDEADGHPRRRHEPQRD 141
Query: 144 -DP-ELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNL----CTTTAS 192
DP +LD+FM+ Y ML +Y+ +L RP EA F ++VE QL +L C T S
Sbjct: 142 DDPDQLDQFMDAYCSMLTRYREELERPILEAAEFFSRVETQLDSLAESNCEGTGS 196
>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica
GN=OSH3 PE=2 SV=1
Length = 365
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 89 IKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGA----D 144
+KA+I SHP Y RLL A++DC KVG P E A + A ++ +R + D
Sbjct: 73 VKARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPED 132
Query: 145 PELDEFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNL 186
PELD+FME Y +L + K +L+RP EA FL VE +L ++
Sbjct: 133 PELDQFMEDYCKLLVECKEELSRPLQEAEEFLRTVESELNSI 174
>sp|Q10EC6|KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica
GN=Os03g0772100 PE=2 SV=2
Length = 347
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 88 VIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAI 125
+KA+I SHP Y LL AY+ C+KVGAPP++ L A+
Sbjct: 80 AMKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAV 117
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
PE=2 SV=1
Length = 291
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 82 VEDVSTVIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCF 141
V + + +K +IA+HP Y +LL A++ C +V P + +++A S+ R T
Sbjct: 22 VAEQNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAV 81
Query: 142 GAD---PELDEFMETYSDMLAKYKSDLARPFD----EATTFLNKVELQLRNLCTTT 190
G ELD F+ Y +L +K L + EA ++E L +L T
Sbjct: 82 GYHHDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGAT 137
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
PE=1 SV=1
Length = 431
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 90 KAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDA--IRSEKDLYRRDSVPTC----FGA 143
KA+I SHP Y +LL A++ C ++ P + +DA +S+ + + ++ G
Sbjct: 160 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQGLVGD 219
Query: 144 DPELDEFMETYSDMLAKYKSDLAR 167
D ELD+FM Y +L +K L +
Sbjct: 220 DKELDQFMTHYVLLLCSFKEQLQQ 243
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
Length = 427
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 90 KAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDA--IRSEKDLYRRDSVPTCF-GADPE 146
KA+I +HP Y LL A++ C ++ P + +DA +S+ + + ++ G D E
Sbjct: 168 KAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNGMVGDDKE 227
Query: 147 LDEFMETYSDMLAKYKSDLAR 167
LD+FM Y +L +K L +
Sbjct: 228 LDQFMRNYVLLLCSFKEQLQQ 248
>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
Length = 294
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 89 IKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGAD---- 144
+K +IA+HP Y +LL A++ C +V P + +++A S R T G
Sbjct: 31 MKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVGFSHHDR 90
Query: 145 PELDEFMETYSDMLAKYKSDLARPFD----EATTFLNKVELQLRNLCTTT 190
ELD F+ Y +L +K L + EA ++E L +L T
Sbjct: 91 QELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGAT 140
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
PE=2 SV=3
Length = 393
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 90 KAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDA--IRSEKDLYRRDSVPTCFGA---- 143
KA+I SHP Y +LL A++ C ++ P + +DA +S+ + + ++ G
Sbjct: 124 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQGLLAGD 183
Query: 144 DPELDEFMETYSDMLAKYKSDLAR 167
D ELD FM Y +L +K L +
Sbjct: 184 DKELDHFMTHYVLLLCSFKEQLQQ 207
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
PE=1 SV=2
Length = 383
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 90 KAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGA---DPE 146
KA I HP Y +LL A++ C +V P + +DA S+ L+ + + G + E
Sbjct: 119 KAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQ--LHTVAAKYSTLGVVVDNKE 176
Query: 147 LDEFMETYSDMLAKYKSDLARPF----DEATTFLNKVELQLRNLCTTTAS 192
LD FM Y +L +K L EA T ++E L++L + S
Sbjct: 177 LDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPS 226
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
GN=LET12 PE=2 SV=1
Length = 426
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 90 KAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDA-IRSEKDLYRRDSVPTCFGA----- 143
KA I +HP Y +LL A++ C ++ P + +DA + +++ + SV G
Sbjct: 164 KADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSV---LGQGQPPL 220
Query: 144 -DPELDEFMETYSDMLAKYKSDLAR 167
D +LD+FM Y +L+ +K L +
Sbjct: 221 DDKDLDQFMTHYVLLLSSFKEQLQQ 245
>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica
GN=HOS58 PE=2 SV=2
Length = 313
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 90 KAKIASHPCYPRLLEAYIDCQKVGAP----PEIAYLLDAIRSEKDLYRRDSVPTCFGADP 145
KA +A+HP Y RLLEA++ C +V P P I + A +
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGGE 102
Query: 146 ELDEFMETYSDMLAKYKSDLAR 167
ELD FM Y +L +K L +
Sbjct: 103 ELDLFMTHYVLLLCSFKEQLQQ 124
>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica
GN=HOS59 PE=2 SV=2
Length = 323
Score = 37.4 bits (85), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 90 KAKIASHPCYPRLLEAYIDCQKVGAP 115
KA IA+HP Y RLLEA++ C +V P
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATP 73
>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica
GN=OSH45 PE=2 SV=2
Length = 374
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 90 KAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDA--IRSEKDLYRRDSVPTCFGAD--P 145
KA+I +HP Y +LL A++ C ++ P + +DA +S+ + + ++ D
Sbjct: 109 KAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDDGR 168
Query: 146 ELDEFMETYSDMLAKYKSDLAR 167
ELD+FM Y +L +K L +
Sbjct: 169 ELDQFMTHYVLLLCSFKEQLQQ 190
>sp|P97368|MEIS3_MOUSE Homeobox protein Meis3 OS=Mus musculus GN=Meis3 PE=2 SV=2
Length = 378
Score = 37.0 bits (84), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 36/155 (23%)
Query: 51 SAAASAISEAAAPISSTPPPH-PH-PQEIQPPEVE-DVSTVIKAKIASHPCYPRLLEAYI 107
+ A ++ SEAA + P P+ PH P ++Q P ++ D K I HP +P L +
Sbjct: 18 TTALASFSEAAPSVPRAPGPYTPHRPPQLQAPGLDSDSLKREKDDIYGHPLFPLLALVFE 77
Query: 108 DCQ------------KVGAPP------------EIAYLLDAIRSEKDLYRRDSVPTCFGA 143
C+ +G+PP +IA IRSE+ L F +
Sbjct: 78 KCELATCSPRDGASAGLGSPPGGDVCSSDSFNEDIAAFAKQIRSERPL---------FSS 128
Query: 144 DPELDEFMETYSDMLAKYKSDLARPFDEATTFLNK 178
+PELD M +L + +L + D F ++
Sbjct: 129 NPELDNLMVQAIQVLRFHLLELEKVHDLCDNFCHR 163
>sp|Q7S130|PRM1_NEUCR Plasma membrane fusion protein prm-1 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=prm-1 PE=3 SV=1
Length = 764
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 35 LVYPGRIPTFGSDELLSAAASAISEAAAPISSTPPPHPHPQEIQP 79
+VY GR+P + EL++ S ++ P +P P PH E P
Sbjct: 714 VVYAGRVPVGNTRELITRYPSHQRTSSYPTVESPDPMPHGDEKVP 758
>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica
GN=HOS66 PE=2 SV=1
Length = 314
Score = 34.3 bits (77), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 19/117 (16%)
Query: 88 VIKAKIASHPCYPRLLEAYIDCQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGA---- 143
++K +IA HP +L+ A++ C +V P + L+DA L + + + A
Sbjct: 52 LLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDA-----QLAQSSGLLHSYAAHHRP 106
Query: 144 ------DPELDEFMETYSDMLAKYKSDLARPFD----EATTFLNKVELQLRNLCTTT 190
ELD F+ Y +L ++ L + EA ++E L++L T
Sbjct: 107 FLSPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGAT 163
>sp|P04919|B3AT_MOUSE Band 3 anion transport protein OS=Mus musculus GN=Slc4a1 PE=1 SV=1
Length = 929
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 101 RLLEAYIDCQKVGAP---PEIAYLLDAIRSEKDLYRRDSVPTCFGADPEL 147
R LE+++DC V P P LL+ + +K+L RR +P+ DP L
Sbjct: 322 RSLESFLDCSLVLPPTDAPSEKALLNLVPVQKELLRRRYLPSPAKPDPNL 371
>sp|Q0W4Z8|Y1674_UNCMA UPF0280 protein UNCMA_16740 OS=Uncultured methanogenic archaeon
RC-I GN=UNCMA_16740 PE=3 SV=1
Length = 245
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 14 GSCWENLVFPTSHEYDYSSSPLVYPGRIPTFGSDELLSAAASAISEAAAPISSTPPPHPH 73
G C + S + S + LV + L AAA+A+ ++S
Sbjct: 151 GVCTSSATVGPSISFGNSDAALVISDDV------SLADAAATALGNRIVDVASLATAFDF 204
Query: 74 PQEIQPPEVEDVSTVIKAKIASHPCYPRLLEAYIDCQKV 112
+EI PEV +I K+A++ P+++ A++D +K+
Sbjct: 205 LKEI--PEVTGAVGIIGDKMATYGRLPKIVRAHVDYEKI 241
>sp|Q91WD7|KI18A_MOUSE Kinesin-like protein KIF18A OS=Mus musculus GN=Kif18a PE=2 SV=1
Length = 886
Score = 30.4 bits (67), Expect = 7.0, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 149 EFMETYSDMLAKYKSDLARPFDEATTFLNKVELQLRNL 186
E ++T S L K K ++++ FDE T +L++VE ++R L
Sbjct: 485 EKLKTNSCFLEKKKEEVSKQFDENTNWLHRVENEMRLL 522
>sp|Q1E0Q7|MED10_COCIM Mediator of RNA polymerase II transcription subunit 10
OS=Coccidioides immitis (strain RS) GN=NUT2 PE=3 SV=3
Length = 163
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 109 CQKVGAPPEIAYLLDAIRSEKDLYRRDSVPTCFGADPELDEFMETYS---DMLAK 160
Q + PPEI +DA R+ D+Y R+ V ++ EL ME ++ D+LAK
Sbjct: 80 VQSIQLPPEIIDYVDAARN-PDIYTREFVELVQKSNQELKGKMEAFASFRDVLAK 133
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,399,231
Number of Sequences: 539616
Number of extensions: 3381305
Number of successful extensions: 15981
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 15819
Number of HSP's gapped (non-prelim): 141
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)