Query 038923
Match_columns 140
No_of_seqs 125 out of 2457
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 04:36:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038923.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038923hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 7.1E-31 1.5E-35 157.7 7.7 137 3-140 5-159 (226)
2 KOG4412 26S proteasome regulat 100.0 1.1E-29 2.3E-34 152.6 8.2 135 3-140 40-192 (226)
3 PHA02791 ankyrin-like protein; 100.0 5.1E-28 1.1E-32 159.5 11.9 136 2-140 62-214 (284)
4 KOG0509 Ankyrin repeat and DHH 99.9 4.9E-28 1.1E-32 167.9 8.2 132 3-138 80-230 (600)
5 PHA02791 ankyrin-like protein; 99.9 1.1E-26 2.3E-31 153.2 12.1 131 2-140 31-180 (284)
6 PHA02875 ankyrin repeat protei 99.9 1.7E-26 3.8E-31 160.3 13.1 136 3-140 70-222 (413)
7 PHA02875 ankyrin repeat protei 99.9 1.9E-26 4.1E-31 160.1 12.6 133 3-139 4-187 (413)
8 PHA02741 hypothetical protein; 99.9 2.1E-25 4.6E-30 137.8 13.1 119 2-140 22-152 (169)
9 PHA02874 ankyrin repeat protei 99.9 1.4E-25 3.1E-30 156.6 12.8 134 3-139 37-209 (434)
10 PHA02743 Viral ankyrin protein 99.9 3.7E-25 8E-30 136.3 12.2 118 3-140 22-148 (166)
11 PHA02878 ankyrin repeat protei 99.9 2.3E-25 4.9E-30 157.1 12.5 55 3-59 39-93 (477)
12 PHA02946 ankyin-like protein; 99.9 2.1E-25 4.6E-30 155.7 12.1 135 2-139 73-229 (446)
13 PHA03100 ankyrin repeat protei 99.9 3.6E-25 7.9E-30 156.2 12.1 134 3-140 143-303 (480)
14 PHA02874 ankyrin repeat protei 99.9 8.4E-25 1.8E-29 152.7 13.0 137 1-140 1-177 (434)
15 PHA02859 ankyrin repeat protei 99.9 1.5E-24 3.2E-29 138.1 12.8 132 2-140 22-179 (209)
16 PHA03095 ankyrin-like protein; 99.9 6.8E-25 1.5E-29 154.5 12.4 134 3-140 85-310 (471)
17 KOG0510 Ankyrin repeat protein 99.9 2.7E-25 5.8E-30 158.1 9.6 135 2-140 122-326 (929)
18 PLN03192 Voltage-dependent pot 99.9 7.4E-25 1.6E-29 162.6 12.3 136 1-140 525-675 (823)
19 PHA02798 ankyrin-like protein; 99.9 1E-24 2.3E-29 154.2 12.0 136 2-140 110-311 (489)
20 PHA02884 ankyrin repeat protei 99.9 4.1E-24 8.8E-29 141.3 13.0 117 2-138 34-155 (300)
21 PHA02795 ankyrin-like protein; 99.9 3E-24 6.4E-29 147.3 12.1 134 2-140 117-282 (437)
22 PHA03100 ankyrin repeat protei 99.9 1.6E-24 3.5E-29 152.9 11.1 135 2-140 107-270 (480)
23 KOG0508 Ankyrin repeat protein 99.9 5.1E-25 1.1E-29 149.1 7.2 117 3-139 86-202 (615)
24 PHA02989 ankyrin repeat protei 99.9 4.1E-24 8.8E-29 151.4 12.0 137 2-140 109-309 (494)
25 KOG0510 Ankyrin repeat protein 99.9 1.6E-24 3.5E-29 154.1 9.9 137 2-140 226-397 (929)
26 PHA02878 ankyrin repeat protei 99.9 4.2E-24 9.2E-29 150.7 11.8 132 2-139 169-320 (477)
27 KOG0508 Ankyrin repeat protein 99.9 6.7E-25 1.5E-29 148.5 7.3 118 2-140 118-235 (615)
28 PHA02736 Viral ankyrin protein 99.9 3.4E-24 7.5E-29 130.7 9.8 121 2-140 18-146 (154)
29 KOG0509 Ankyrin repeat and DHH 99.9 2.9E-24 6.4E-29 149.4 10.0 132 4-138 47-196 (600)
30 PHA02859 ankyrin repeat protei 99.9 2.9E-23 6.3E-28 132.2 11.6 126 2-131 52-203 (209)
31 PHA02716 CPXV016; CPX019; EVM0 99.9 3.8E-23 8.2E-28 150.1 11.6 135 2-140 178-386 (764)
32 KOG0512 Fetal globin-inducing 99.9 2.8E-23 6.1E-28 124.4 8.6 117 4-139 66-183 (228)
33 PHA02716 CPXV016; CPX019; EVM0 99.9 1.1E-22 2.3E-27 147.8 11.6 135 2-140 213-423 (764)
34 PF12796 Ank_2: Ankyrin repeat 99.9 1.6E-22 3.5E-27 112.6 9.5 89 5-116 1-89 (89)
35 PHA02876 ankyrin repeat protei 99.9 3.4E-22 7.3E-27 146.3 12.9 133 3-139 147-327 (682)
36 PHA02946 ankyin-like protein; 99.9 3.3E-22 7.1E-27 139.8 11.7 133 3-140 39-195 (446)
37 PHA03095 ankyrin-like protein; 99.9 3.2E-22 6.9E-27 141.0 11.6 118 2-139 48-173 (471)
38 KOG0514 Ankyrin repeat protein 99.9 4.2E-23 9E-28 136.0 5.7 112 28-140 260-393 (452)
39 PHA02876 ankyrin repeat protei 99.9 5.8E-22 1.3E-26 145.0 11.9 125 3-131 343-487 (682)
40 KOG4177 Ankyrin [Cell wall/mem 99.9 2.9E-22 6.3E-27 148.8 8.9 118 3-140 509-626 (1143)
41 KOG0502 Integral membrane anky 99.9 3E-22 6.6E-27 124.2 6.9 116 2-138 161-276 (296)
42 PHA02989 ankyrin repeat protei 99.9 2.2E-21 4.9E-26 137.5 11.7 136 2-140 70-276 (494)
43 PHA02917 ankyrin-like protein; 99.9 4E-21 8.6E-26 139.3 11.1 129 3-140 105-251 (661)
44 cd00204 ANK ankyrin repeats; 99.9 4.7E-20 1E-24 108.1 12.6 119 2-140 8-126 (126)
45 KOG4177 Ankyrin [Cell wall/mem 99.9 2.4E-21 5.1E-26 144.0 8.0 135 2-140 441-593 (1143)
46 PF12796 Ank_2: Ankyrin repeat 99.8 1E-20 2.2E-25 105.3 8.4 79 40-140 1-79 (89)
47 PHA02798 ankyrin-like protein; 99.8 1.1E-20 2.3E-25 133.9 10.5 111 9-139 46-167 (489)
48 KOG0505 Myosin phosphatase, re 99.8 4E-21 8.7E-26 131.6 7.8 135 2-140 74-251 (527)
49 KOG0502 Integral membrane anky 99.8 3.3E-21 7.2E-26 119.6 5.8 115 4-140 132-246 (296)
50 KOG0195 Integrin-linked kinase 99.8 1.2E-20 2.7E-25 121.6 7.5 105 3-127 36-140 (448)
51 PHA02741 hypothetical protein; 99.8 6.6E-20 1.4E-24 113.3 10.2 98 31-140 16-118 (169)
52 PHA02792 ankyrin-like protein; 99.8 4.3E-20 9.3E-25 131.4 9.3 133 4-140 74-237 (631)
53 KOG0514 Ankyrin repeat protein 99.8 1.9E-20 4.2E-25 123.5 6.3 118 2-139 269-426 (452)
54 PHA02730 ankyrin-like protein; 99.8 1.6E-19 3.4E-24 129.6 11.1 124 13-140 358-518 (672)
55 KOG4214 Myotrophin and similar 99.8 1.5E-19 3.2E-24 97.8 7.9 104 3-127 4-107 (117)
56 PHA02743 Viral ankyrin protein 99.8 2.2E-19 4.7E-24 110.7 9.6 101 2-121 58-163 (166)
57 KOG0507 CASK-interacting adapt 99.8 6.6E-20 1.4E-24 130.1 6.9 118 3-140 51-168 (854)
58 KOG0512 Fetal globin-inducing 99.8 2.5E-19 5.5E-24 107.6 8.2 111 2-132 98-210 (228)
59 PHA02917 ankyrin-like protein; 99.8 4.4E-19 9.4E-24 128.8 10.9 116 3-140 34-158 (661)
60 KOG0195 Integrin-linked kinase 99.8 2.2E-20 4.8E-25 120.5 3.3 116 6-140 5-120 (448)
61 PLN03192 Voltage-dependent pot 99.8 5.7E-19 1.2E-23 131.5 11.0 125 2-132 559-701 (823)
62 TIGR00870 trp transient-recept 99.8 6.2E-19 1.3E-23 130.3 10.7 133 2-140 18-195 (743)
63 PHA02795 ankyrin-like protein; 99.8 8E-19 1.7E-23 120.8 10.0 130 7-140 83-241 (437)
64 PHA02730 ankyrin-like protein; 99.8 7.3E-19 1.6E-23 126.2 10.1 121 2-140 42-175 (672)
65 PHA02792 ankyrin-like protein; 99.8 4.9E-18 1.1E-22 121.0 11.1 106 4-129 342-452 (631)
66 TIGR00870 trp transient-recept 99.8 1E-18 2.2E-23 129.2 7.5 120 3-140 130-277 (743)
67 COG0666 Arp FOG: Ankyrin repea 99.8 6.5E-18 1.4E-22 108.1 10.1 118 3-139 75-199 (235)
68 PHA02736 Viral ankyrin protein 99.8 2.6E-18 5.5E-23 104.8 6.6 92 3-113 57-153 (154)
69 KOG0507 CASK-interacting adapt 99.8 9.9E-19 2.2E-23 124.3 5.4 133 3-140 84-241 (854)
70 PHA02884 ankyrin repeat protei 99.7 1.4E-17 3E-22 110.5 9.8 93 30-140 26-124 (300)
71 KOG1710 MYND Zn-finger and ank 99.7 3.2E-17 7E-22 105.7 10.9 118 3-139 14-131 (396)
72 PTZ00322 6-phosphofructo-2-kin 99.7 3.3E-17 7.3E-22 119.5 10.2 104 4-127 85-195 (664)
73 PF13637 Ank_4: Ankyrin repeat 99.7 1.2E-17 2.6E-22 84.3 5.3 54 86-140 1-54 (54)
74 cd00204 ANK ankyrin repeats; 99.7 1.8E-16 3.9E-21 92.7 9.9 91 32-140 3-93 (126)
75 PF13637 Ank_4: Ankyrin repeat 99.7 6.4E-17 1.4E-21 81.6 6.6 54 36-106 1-54 (54)
76 KOG0515 p53-interacting protei 99.7 7.6E-17 1.7E-21 111.2 8.3 115 5-139 554-671 (752)
77 KOG0505 Myosin phosphatase, re 99.7 1E-16 2.2E-21 110.3 7.4 91 4-113 43-133 (527)
78 PTZ00322 6-phosphofructo-2-kin 99.7 5.2E-16 1.1E-20 113.3 9.2 84 39-140 85-168 (664)
79 PF13857 Ank_5: Ankyrin repeat 99.7 1.7E-16 3.7E-21 80.5 4.2 47 80-127 10-56 (56)
80 KOG3676 Ca2+-permeable cation 99.6 1.1E-15 2.4E-20 109.7 9.5 120 3-140 186-328 (782)
81 KOG3676 Ca2+-permeable cation 99.6 1.1E-15 2.4E-20 109.7 9.3 137 2-139 144-292 (782)
82 KOG4214 Myotrophin and similar 99.6 8.7E-16 1.9E-20 83.3 5.9 83 39-140 5-87 (117)
83 PF13857 Ank_5: Ankyrin repeat 99.6 7.2E-16 1.6E-20 78.2 4.3 56 20-93 1-56 (56)
84 KOG0515 p53-interacting protei 99.6 2.8E-15 6E-20 103.7 6.8 83 40-140 554-636 (752)
85 KOG4369 RTK signaling protein 99.5 4E-15 8.6E-20 110.5 2.7 137 1-140 757-912 (2131)
86 COG0666 Arp FOG: Ankyrin repea 99.5 6.2E-13 1.4E-17 85.0 10.7 91 32-140 69-167 (235)
87 KOG4369 RTK signaling protein 99.4 8.5E-14 1.8E-18 103.6 3.4 135 3-140 928-1080(2131)
88 KOG0782 Predicted diacylglycer 99.4 5.6E-12 1.2E-16 88.5 8.5 119 3-139 868-986 (1004)
89 KOG0783 Uncharacterized conser 99.3 4.8E-12 1E-16 92.0 6.2 96 16-129 32-128 (1267)
90 KOG1710 MYND Zn-finger and ank 99.2 6.9E-11 1.5E-15 76.9 7.5 88 3-108 47-134 (396)
91 KOG0506 Glutaminase (contains 99.2 1.3E-11 2.9E-16 84.8 4.2 88 4-109 509-596 (622)
92 PF13606 Ank_3: Ankyrin repeat 99.2 2.8E-11 6E-16 53.2 3.5 29 85-113 1-29 (30)
93 KOG0506 Glutaminase (contains 99.2 2.2E-11 4.9E-16 83.7 4.3 88 34-139 504-592 (622)
94 KOG0818 GTPase-activating prot 99.2 1.3E-10 2.8E-15 80.4 7.5 84 39-140 136-220 (669)
95 KOG0705 GTPase-activating prot 99.2 2.3E-10 4.9E-15 80.5 7.9 93 4-113 627-721 (749)
96 PF13606 Ank_3: Ankyrin repeat 99.1 1E-10 2.2E-15 51.3 3.5 28 35-62 1-28 (30)
97 PF00023 Ank: Ankyrin repeat H 99.1 1.3E-10 2.7E-15 52.4 3.9 32 85-116 1-32 (33)
98 KOG0818 GTPase-activating prot 99.1 2.7E-10 5.8E-15 78.9 7.1 86 3-106 135-220 (669)
99 PF00023 Ank: Ankyrin repeat H 99.1 3.5E-10 7.6E-15 50.9 4.1 28 35-62 1-28 (33)
100 KOG0782 Predicted diacylglycer 99.0 1E-09 2.3E-14 77.5 7.2 89 3-108 901-989 (1004)
101 KOG0522 Ankyrin repeat protein 99.0 1.1E-09 2.5E-14 76.2 7.0 87 4-107 23-109 (560)
102 KOG0522 Ankyrin repeat protein 98.9 2.9E-09 6.2E-14 74.3 6.4 85 38-139 22-107 (560)
103 KOG0705 GTPase-activating prot 98.9 9.3E-09 2E-13 72.6 6.6 87 40-140 628-714 (749)
104 KOG0783 Uncharacterized conser 98.8 2.6E-09 5.6E-14 78.3 1.8 60 80-140 46-106 (1267)
105 KOG0511 Ankyrin repeat protein 98.7 3.5E-08 7.5E-13 66.8 5.8 67 4-73 39-105 (516)
106 KOG3609 Receptor-activated Ca2 98.7 7.3E-08 1.6E-12 70.8 7.2 112 4-140 28-151 (822)
107 KOG0511 Ankyrin repeat protein 98.7 8.2E-08 1.8E-12 65.0 6.6 68 37-121 37-104 (516)
108 KOG0521 Putative GTPase activa 98.7 3.5E-08 7.6E-13 73.4 4.8 85 34-136 654-738 (785)
109 KOG0520 Uncharacterized conser 98.5 8E-08 1.7E-12 71.9 3.2 108 31-139 569-699 (975)
110 KOG2384 Major histocompatibili 98.4 7.1E-07 1.5E-11 55.2 5.0 60 79-139 5-65 (223)
111 KOG2384 Major histocompatibili 98.3 2.1E-06 4.5E-11 53.2 5.0 65 30-111 6-71 (223)
112 KOG0520 Uncharacterized conser 98.3 1.1E-06 2.4E-11 66.1 3.9 57 81-139 603-660 (975)
113 KOG0521 Putative GTPase activa 98.1 2.7E-06 5.8E-11 63.7 3.9 84 3-105 658-741 (785)
114 KOG3609 Receptor-activated Ca2 98.0 3.8E-05 8.3E-10 57.1 7.4 97 3-115 64-160 (822)
115 KOG2505 Ankyrin repeat protein 97.9 2.5E-05 5.5E-10 54.9 4.3 45 83-128 427-471 (591)
116 smart00248 ANK ankyrin repeats 97.8 6.2E-05 1.3E-09 31.5 3.5 27 86-112 2-28 (30)
117 smart00248 ANK ankyrin repeats 97.7 7E-05 1.5E-09 31.3 3.5 27 35-61 1-27 (30)
118 KOG2505 Ankyrin repeat protein 96.9 0.00081 1.8E-08 47.7 2.9 43 35-94 429-471 (591)
119 PF06128 Shigella_OspC: Shigel 96.4 0.052 1.1E-06 35.2 8.0 112 5-140 157-274 (284)
120 PF03158 DUF249: Multigene fam 96.3 0.026 5.6E-07 35.3 6.2 122 5-140 50-190 (192)
121 PF06128 Shigella_OspC: Shigel 96.1 0.067 1.4E-06 34.8 7.3 94 4-112 182-280 (284)
122 PF11929 DUF3447: Domain of un 95.7 0.038 8.2E-07 29.5 4.5 48 3-59 8-55 (76)
123 PF11929 DUF3447: Domain of un 94.8 0.05 1.1E-06 29.0 3.1 45 88-140 8-52 (76)
124 PF03158 DUF249: Multigene fam 87.9 2.7 5.8E-05 26.6 5.3 73 37-135 47-119 (192)
125 PF08898 DUF1843: Domain of un 80.1 3.6 7.9E-05 20.2 2.8 24 4-27 6-29 (53)
126 PF12645 HTH_16: Helix-turn-he 62.0 21 0.00045 18.4 3.7 25 4-28 2-26 (65)
127 PF05476 PET122: PET122; Inte 57.9 13 0.00029 24.9 2.7 53 4-58 16-68 (267)
128 KOG4335 FERM domain-containing 47.8 15 0.00033 27.2 1.9 44 80-124 171-215 (558)
129 KOG4591 Uncharacterized conser 45.2 38 0.00082 22.1 3.2 55 30-97 216-271 (280)
130 PF04053 Coatomer_WDAD: Coatom 44.3 62 0.0013 23.8 4.5 101 4-139 324-425 (443)
131 KOG3836 HLH transcription fact 36.4 8.7 0.00019 29.0 -0.6 52 18-72 413-464 (605)
132 KOG1595 CCCH-type Zn-finger pr 29.3 8.4 0.00018 28.5 -1.6 26 36-61 58-83 (528)
133 PF04840 Vps16_C: Vps16, C-ter 28.6 84 0.0018 22.0 3.1 48 91-139 8-61 (319)
134 TIGR02957 SigX4 RNA polymerase 28.5 53 0.0012 22.2 2.1 52 4-58 172-223 (281)
135 KOG3836 HLH transcription fact 24.9 15 0.00032 27.8 -1.0 32 80-111 423-454 (605)
136 PF04405 ScdA_N: Domain of Unk 21.6 1.3E+02 0.0027 15.0 3.4 34 98-135 12-45 (56)
137 cd04445 DEP_PLEK1 DEP (Disheve 20.8 98 0.0021 17.6 1.8 10 100-109 36-45 (99)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=7.1e-31 Score=157.65 Aligned_cols=137 Identities=20% Similarity=0.195 Sum_probs=96.1
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
++.+.+++......++.+++..+..++...|.+|+||||+||..|+.+++.||++.....++.+|+.||+|
T Consensus 5 ~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~ 84 (226)
T KOG4412|consen 5 SLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGN 84 (226)
T ss_pred chHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCc
Confidence 34566666666667777777666544444445777777777777777777777765444456667777777
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++..++.|.|+||+|+.+|+.+++++|+..|+.++.+|..|+| |||.|+..|.++++++|+
T Consensus 85 ~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qt-plHRAAavGklkvie~Li 159 (226)
T KOG4412|consen 85 DEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQT-PLHRAAAVGKLKVIEYLI 159 (226)
T ss_pred HHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCc-hhHHHHhccchhhHHHHH
Confidence 124556777777778888888888888888888777777777777777 888888888777777764
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.1e-29 Score=152.60 Aligned_cols=135 Identities=20% Similarity=0.211 Sum_probs=109.2
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhh-CCcccCCCCCCCCCC--------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKL-CPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~-~~~~~~~~~~~~~~~-------- 73 (140)
+|||+||..|..+++..|+++ +....+-.|..||||||+||..|+-|+|+.|+.+ +++ ++..+..|.|+
T Consensus 40 t~LHwa~S~g~~eiv~fLlsq-~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~ad-vna~tn~G~T~LHyAagK~ 117 (226)
T KOG4412|consen 40 TPLHWACSFGHVEIVYFLLSQ-PNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGAD-VNATTNGGQTCLHYAAGKG 117 (226)
T ss_pred ceeeeeeecCchhHHHHHHhc-CCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCC-cceecCCCcceehhhhcCC
Confidence 577888888888888877763 2332344567788888888888888888888877 455 67777777777
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..++.++.+|..|.||||.|+..|..+++++|+..|+.++.+|..|+| |||.|..-|+.++...|+
T Consensus 118 r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~T-pL~~al~e~~~d~a~lLV 192 (226)
T KOG4412|consen 118 RLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFT-PLHHALAEGHPDVAVLLV 192 (226)
T ss_pred hhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCcc-HHHHHHhccCchHHHHHH
Confidence 344566899999999999999999999999999999999999999999 999998888888777664
No 3
>PHA02791 ankyrin-like protein; Provisional
Probab=99.96 E-value=5.1e-28 Score=159.46 Aligned_cols=136 Identities=15% Similarity=0.073 Sum_probs=111.3
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCC-CC-------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFE-TP------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~-~~------- 73 (140)
.||||.|+..|+.++++.|++.+.+. +..+..|+||||+|+..|+.+++++|++.+++ .+.++..|+ ||
T Consensus 62 ~TpLh~Aa~~g~~eiV~lLL~~Gadv--n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gad-in~~~~~g~~TpL~~Aa~~ 138 (284)
T PHA02791 62 EFPLHQAATLEDTKIVKILLFSGMDD--SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVML 138 (284)
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccCCCCCcHHHHHHHHc
Confidence 47899999999999999998887766 56788899999999999999999999999988 466777775 56
Q ss_pred Cch----hhhh----ccc-cCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 TDS----WVVH----MMN-RNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ~~~----~~~~----~~~-~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
... .++. ..+ ..|.||||+|+..|+.+++++|+++|++++.++..|.|+|||+|+..|+.+++++|+
T Consensus 139 g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl 214 (284)
T PHA02791 139 NDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALF 214 (284)
T ss_pred CCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHH
Confidence 000 0111 122 247899999999999999999999999999999889983499999999999999985
No 4
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.95 E-value=4.9e-28 Score=167.95 Aligned_cols=132 Identities=20% Similarity=0.214 Sum_probs=117.0
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCC-CCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVP-GSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~-~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
+.||+|+.+++++.+++|+++++++ +... .-+.||||+|+++|++.++++|+++|++ +..+|.+|.+|
T Consensus 80 tlLHWAAiNNrl~v~r~li~~gadv--n~~gG~l~stPLHWAar~G~~~vv~lLlqhGAd-pt~~D~~G~~~lHla~~~~ 156 (600)
T KOG0509|consen 80 TLLHWAAINNRLDVARYLISHGADV--NAIGGVLGSTPLHWAARNGHISVVDLLLQHGAD-PTLKDKQGLTPLHLAAQFG 156 (600)
T ss_pred cceeHHHHcCcHHHHHHHHHcCCCc--cccCCCCCCCcchHHHHcCcHHHHHHHHHcCCC-CceecCCCCcHHHHHHHhC
Confidence 5799999999999999999999887 4444 6688999999999999999999999999 79999999998
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCcccccc-CCCCChHHHHHHHcCCHHHHhh
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEM-DDGLTTSLHVAASAGHLGTFAN 138 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~-~~~~t~~l~~A~~~g~~~~~~~ 138 (140)
....+++.+|.+|+|||++|+.+|+...+..|++.|+.+...| ..|.| |||||+..|+.+++.+
T Consensus 157 ~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~T-pLHwa~~~gN~~~v~L 230 (600)
T KOG0509|consen 157 HTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNT-PLHWAVVGGNLTAVKL 230 (600)
T ss_pred chHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCc-hHHHHHhcCCcceEeh
Confidence 3456778899999999999999999888999999999999888 57888 9999999999988873
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.95 E-value=1.1e-26 Score=153.21 Aligned_cols=131 Identities=17% Similarity=0.181 Sum_probs=106.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.+.++.|++.+... +. .++.||||+|+..|+.+++++|++.|++ ++.+|..|.||
T Consensus 31 ~TpLh~Aa~~g~~eiv~~Ll~~ga~~--n~--~d~~TpLh~Aa~~g~~eiV~lLL~~Gad-vn~~d~~G~TpLh~Aa~~g 105 (284)
T PHA02791 31 HSALYYAIADNNVRLVCTLLNAGALK--NL--LENEFPLHQAATLEDTKIVKILLFSGMD-DSQFDDKGNTALYYAVDSG 105 (284)
T ss_pred CcHHHHHHHcCCHHHHHHHHHCcCCC--cC--CCCCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcC
Confidence 47999999999999999999998665 32 3578999999999999999999999998 67788888888
Q ss_pred ---------CchhhhhccccCCC-cHHHHHHHcCCHHHHHHHHcCCCcccccc-CCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKE-SALYVAYERGRHDVVKQLLNYPSVSLLEM-DDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~-t~l~~A~~~~~~~~~~~L~~~~~~~~~~~-~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++.++..|+ ||||+|+..|+.+++++|++.+.+. .+ ..|.| |||+|+..|+.+++++|+
T Consensus 106 ~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~T-pLh~Aa~~g~~eiv~lLL 180 (284)
T PHA02791 106 NMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLS-CIHITIKNGHVDMMILLL 180 (284)
T ss_pred CHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCcc-HHHHHHHcCCHHHHHHHH
Confidence 22334455666664 8999999999999999998876543 22 24677 999999999999988874
No 6
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.94 E-value=1.7e-26 Score=160.26 Aligned_cols=136 Identities=16% Similarity=0.171 Sum_probs=93.1
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
+|||.|+..|+.+.++.|++.++... ...+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||
T Consensus 70 t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad-~~~~~~~g~tpLh~A~~~~~ 147 (413)
T PHA02875 70 SELHDAVEEGDVKAVEELLDLGKFAD-DVFYKDGMTPLHLATILKKLDIMKLLIARGAD-PDIPNTDKFSPLHLAVMMGD 147 (413)
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCccc-ccccCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCC
Confidence 45666666666666666666554331 23345677788888887888888888877776 56667777777
Q ss_pred --------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 --------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 --------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++.++..|.||||+|+..|+.+++++|++.|++++..+..|.+||+|+|+..|+.+++++|+
T Consensus 148 ~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll 222 (413)
T PHA02875 148 IKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFI 222 (413)
T ss_pred HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHH
Confidence 2334455666777777777777777777777777777777777666544777777777777777763
No 7
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.94 E-value=1.9e-26 Score=160.10 Aligned_cols=133 Identities=19% Similarity=0.105 Sum_probs=77.2
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCC--------------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPND-------------- 68 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~-------------- 68 (140)
++|+.|+..|+.+.++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|++ ++..+.
T Consensus 4 ~~L~~A~~~g~~~iv~~Ll~~g~~~--n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~t~L~~A~~~g~ 80 (413)
T PHA02875 4 VALCDAILFGELDIARRLLDIGINP--NFEIYDGISPIKLAMKFRDSEAIKLLMKHGAI-PDVKYPDIESELHDAVEEGD 80 (413)
T ss_pred hHHHHHHHhCCHHHHHHHHHCCCCC--CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCcccHHHHHHHCCC
Confidence 4566666666666666666665554 44455566666666666666666666666654 333333
Q ss_pred --------------------CCCCC-----------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCc
Q 038923 69 --------------------KFETP-----------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSV 111 (140)
Q Consensus 69 --------------------~~~~~-----------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~ 111 (140)
+|.|| ..++.++.++..|.||||+|+..|+.+++++|++.|++
T Consensus 81 ~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~ 160 (413)
T PHA02875 81 VKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKAC 160 (413)
T ss_pred HHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 34444 12233344455555666666666666666666666665
Q ss_pred cccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 112 SLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 112 ~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
++.++..|.| |||+|+..|+.+++++|
T Consensus 161 ~~~~d~~g~T-pL~~A~~~g~~eiv~~L 187 (413)
T PHA02875 161 LDIEDCCGCT-PLIIAMAKGDIAICKML 187 (413)
T ss_pred CCCCCCCCCC-HHHHHHHcCCHHHHHHH
Confidence 5555555666 66666666666666555
No 8
>PHA02741 hypothetical protein; Provisional
Probab=99.94 E-value=2.1e-25 Score=137.83 Aligned_cols=119 Identities=14% Similarity=0.156 Sum_probs=105.2
Q ss_pred CHHHHHHHHcCCHHHHHHHhhh------chHHHhhcCCCCCCcHHHHHHhhCc----HHHHHHHHhhCCcccCCCCCCCC
Q 038923 2 DERLFETILKGDVPNFLNLVHE------DEAIIKQTVPGSSNTILHLASRYEH----EELALEILKLCPEMLAAPNDKFE 71 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~------~~~~~~~~~~~~g~t~l~~A~~~g~----~~~~~~Ll~~~~~~~~~~~~~~~ 71 (140)
.++||.|++.|+.+.++.|+.. +..+ +..+..|.||||+|+..|+ .+++++|++.++++
T Consensus 22 ~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~i--n~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadi--------- 90 (169)
T PHA02741 22 ENFFHEAARCGCFDIIARFTPFIRGDCHAAAL--NATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADI--------- 90 (169)
T ss_pred CCHHHHHHHcCCHHHHHHHHHHhccchhhhhh--hccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCC---------
Confidence 4799999999999999998643 2333 5678899999999999999 58999999999986
Q ss_pred CCCchhhhhcccc-CCCcHHHHHHHcCCHHHHHHHHc-CCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 72 TPTDSWVVHMMNR-NKESALYVAYERGRHDVVKQLLN-YPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 72 ~~~~~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~L~~-~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.++. .|+||||+|+..++.+++++|+. .|++++.++..|+| |||.|+..++.+++++|+
T Consensus 91 --------n~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~t-pL~~A~~~~~~~iv~~L~ 152 (169)
T PHA02741 91 --------NAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKS-PFELAIDNEDVAMMQILR 152 (169)
T ss_pred --------CCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCC-HHHHHHHCCCHHHHHHHH
Confidence 56664 89999999999999999999997 59999999999999 999999999999998873
No 9
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.94 E-value=1.4e-25 Score=156.56 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=69.2
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcc--------------------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEM-------------------- 62 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~-------------------- 62 (140)
||||.|+..|+.+++++|++.+.+. +..+..|.||||+|+..|+.+++++|++.|.+.
T Consensus 37 tpL~~A~~~g~~~iv~~Ll~~Ga~~--n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g 114 (434)
T PHA02874 37 TPLIDAIRSGDAKIVELFIKHGADI--NHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCG 114 (434)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCc
Confidence 4566666666666666666555544 334455556666666666655555555554421
Q ss_pred --cCCCCCCCCCC-----------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChH
Q 038923 63 --LAAPNDKFETP-----------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTS 123 (140)
Q Consensus 63 --~~~~~~~~~~~-----------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~ 123 (140)
++.++..|.|| ..+..++.++..|.||||+|+..|+.+++++|++.|++++..+..|.| |
T Consensus 115 ~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~t-p 193 (434)
T PHA02874 115 IDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGES-P 193 (434)
T ss_pred CCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCC-H
Confidence 12233444444 122223344445555555555555555555555555555555555555 5
Q ss_pred HHHHHHcCCHHHHhhh
Q 038923 124 LHVAASAGHLGTFANL 139 (140)
Q Consensus 124 l~~A~~~g~~~~~~~L 139 (140)
||+|+..|+.+++++|
T Consensus 194 L~~A~~~g~~~iv~~L 209 (434)
T PHA02874 194 LHNAAEYGDYACIKLL 209 (434)
T ss_pred HHHHHHcCCHHHHHHH
Confidence 5555555555555544
No 10
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.93 E-value=3.7e-25 Score=136.31 Aligned_cols=118 Identities=8% Similarity=0.088 Sum_probs=101.6
Q ss_pred HHHHHHHHcCCHHHHH----HHhhhchHHHhhcCCCCCCcHHHHHHhhCcHH---HHHHHHhhCCcccCCCCCCCCCCCc
Q 038923 3 ERLFETILKGDVPNFL----NLVHEDEAIIKQTVPGSSNTILHLASRYEHEE---LALEILKLCPEMLAAPNDKFETPTD 75 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~----~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~---~~~~Ll~~~~~~~~~~~~~~~~~~~ 75 (140)
++||.|++.|+++.++ .|++.+... +..+..|+||||+|+.+|+.+ ++++|++.|+++
T Consensus 22 ~~l~~a~~~g~~~~l~~~~~~l~~~g~~~--~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadi------------- 86 (166)
T PHA02743 22 NTFLRICRTGNIYELMEVAPFISGDGHLL--HRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADI------------- 86 (166)
T ss_pred cHHHHHHHcCCHHHHHHHHHHHhhcchhh--hccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCC-------------
Confidence 4799999999995544 455555554 567889999999999999865 489999999986
Q ss_pred hhhhhccc-cCCCcHHHHHHHcCCHHHHHHHH-cCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 76 SWVVHMMN-RNKESALYVAYERGRHDVVKQLL-NYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 76 ~~~~~~~~-~~~~t~l~~A~~~~~~~~~~~L~-~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.++ ..|.||||+|+..|+.+++++|+ +.|++++.++..|.| |||+|+..++.+++++|+
T Consensus 87 ----n~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~t-pL~~A~~~~~~~iv~~Ll 148 (166)
T PHA02743 87 ----NARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHET-AYHIAYKMRDRRMMEILR 148 (166)
T ss_pred ----CCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 6666 58999999999999999999999 489999999999999 999999999999999884
No 11
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.93 E-value=2.3e-25 Score=157.14 Aligned_cols=55 Identities=11% Similarity=0.106 Sum_probs=47.3
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhC
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLC 59 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~ 59 (140)
+|||.|++.|+.++++.|++.+.++ +..+..|.||||+||..|+.++++.|++.+
T Consensus 39 tPLh~A~~~g~~e~vk~Ll~~gadv--n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~ 93 (477)
T PHA02878 39 IPLHQAVEARNLDVVKSLLTRGHNV--NQPDHRDLTPLHIICKEPNKLGMKEMIRSI 93 (477)
T ss_pred chHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHCccHhHHHHHHHHH
Confidence 6899999999999999999998777 678899999999999988777666666543
No 12
>PHA02946 ankyin-like protein; Provisional
Probab=99.93 E-value=2.1e-25 Score=155.68 Aligned_cols=135 Identities=10% Similarity=0.064 Sum_probs=99.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCc--HHHHHHHHhhCCcccCCCCCCCCCC------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEH--EELALEILKLCPEMLAAPNDKFETP------ 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~--~~~~~~Ll~~~~~~~~~~~~~~~~~------ 73 (140)
.||||.|++.|+.++++.|++.++++ +..|..|.||||+|+..++ .+++++|++.|+++....+..|.||
T Consensus 73 ~TpLh~Aa~~g~~eiv~lLL~~GAdi--n~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~aa~~ 150 (446)
T PHA02946 73 NYPLHIASKINNNRIVAMLLTHGADP--NACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLACTD 150 (446)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCcCCC--CCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHHHHHC
Confidence 47899999999999999999998777 6788899999999887664 7889999999988655567778777
Q ss_pred ----------CchhhhhccccCCCcHHHHHHHcC--CHHHHHHHHcCCCccccccCCCCChHHHHHHHcC--CHHHHhhh
Q 038923 74 ----------TDSWVVHMMNRNKESALYVAYERG--RHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAG--HLGTFANL 139 (140)
Q Consensus 74 ----------~~~~~~~~~~~~~~t~l~~A~~~~--~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g--~~~~~~~L 139 (140)
..+..++.++..|+||||+|+..+ +.+++++|++.|++++.++..|.| |||+|+..| +.+++++|
T Consensus 151 ~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~T-pLH~Aa~~~~~~~~iv~lL 229 (446)
T PHA02946 151 PSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNT-PLHIVCSKTVKNVDIINLL 229 (446)
T ss_pred CChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCC-HHHHHHHcCCCcHHHHHHH
Confidence 122334556666777777665543 356677777777777777766777 777777654 56666654
No 13
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.93 E-value=3.6e-25 Score=156.17 Aligned_cols=134 Identities=20% Similarity=0.155 Sum_probs=95.6
Q ss_pred HHHHHHHHcC--CHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCC------CCC-
Q 038923 3 ERLFETILKG--DVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKF------ETP- 73 (140)
Q Consensus 3 ~~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~------~~~- 73 (140)
++||.|+..| +.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|++ +...+..| .+|
T Consensus 143 t~L~~A~~~~~~~~~iv~~Ll~~g~di--n~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~t~l 219 (480)
T PHA03100 143 NLLHLYLESNKIDLKILKLLIDKGVDI--NAKNRYGYTPLHIAVEKGNIDVIKFLLDNGAD-INAGDIETLLFTIFETPL 219 (480)
T ss_pred cHHHHHHHcCCChHHHHHHHHHCCCCc--ccccCCCCCHHHHHHHhCCHHHHHHHHHcCCC-ccCCCCCCCcHHHHHhHH
Confidence 5666666666 666666666666555 44555666777777777777777777776665 44455555 333
Q ss_pred ------------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHH
Q 038923 74 ------------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGT 135 (140)
Q Consensus 74 ------------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~ 135 (140)
..+..++.++..|.||||+|+..|+.+++++|++.|++++..+..|.| |++.|+..++.++
T Consensus 220 ~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~t-pl~~A~~~~~~~i 298 (480)
T PHA03100 220 HIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDT-PLHIAILNNNKEI 298 (480)
T ss_pred HHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCc-HHHHHHHhCCHHH
Confidence 122345667778888888888888888888888888888888888888 8888888888888
Q ss_pred HhhhC
Q 038923 136 FANLV 140 (140)
Q Consensus 136 ~~~Ll 140 (140)
+++|+
T Consensus 299 v~~Ll 303 (480)
T PHA03100 299 FKLLL 303 (480)
T ss_pred HHHHH
Confidence 88764
No 14
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.93 E-value=8.4e-25 Score=152.73 Aligned_cols=137 Identities=19% Similarity=0.246 Sum_probs=120.0
Q ss_pred CCHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-------
Q 038923 1 MDERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP------- 73 (140)
Q Consensus 1 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~------- 73 (140)
|+..|+.|+..|+++.++.|++.++... +..+..|.||||.|+..|+.+++++|++.|++ .+..+..|.+|
T Consensus 1 ~~~~l~~ai~~gd~~~v~~ll~~~~~~~-n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~-~n~~~~~~~t~L~~A~~~ 78 (434)
T PHA02874 1 ASQDLRMCIYSGDIEAIEKIIKNKGNCI-NISVDETTTPLIDAIRSGDAKIVELFIKHGAD-INHINTKIPHPLLTAIKI 78 (434)
T ss_pred CcHHHHHHHhcCCHHHHHHHHHcCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHc
Confidence 6788999999999999999998765542 45667899999999999999999999999998 57788888888
Q ss_pred ---------------------------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCC
Q 038923 74 ---------------------------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGL 120 (140)
Q Consensus 74 ---------------------------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~ 120 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++..+..|.
T Consensus 79 ~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~ 158 (434)
T PHA02874 79 GAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGC 158 (434)
T ss_pred CCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCC
Confidence 01123456778899999999999999999999999999999999999
Q ss_pred ChHHHHHHHcCCHHHHhhhC
Q 038923 121 TTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 121 t~~l~~A~~~g~~~~~~~Ll 140 (140)
| |||+|+..|+.+++++|+
T Consensus 159 t-pLh~A~~~~~~~iv~~Ll 177 (434)
T PHA02874 159 Y-PIHIAIKHNFFDIIKLLL 177 (434)
T ss_pred C-HHHHHHHCCcHHHHHHHH
Confidence 9 999999999999999884
No 15
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.93 E-value=1.5e-24 Score=138.10 Aligned_cols=132 Identities=13% Similarity=0.037 Sum_probs=108.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhC--cHHHHHHHHhhCCcccCCCC-CCCCCC-----
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYE--HEELALEILKLCPEMLAAPN-DKFETP----- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g--~~~~~~~Ll~~~~~~~~~~~-~~~~~~----- 73 (140)
.+||+.|++.|+++.++.|++.. +..+..|.||||+|+..+ +.+++++|++.|+++ +.++ ..|.||
T Consensus 22 ~~pL~~A~~~~~~~~vk~Li~~~-----n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadv-n~~~~~~g~TpLh~a~ 95 (209)
T PHA02859 22 CNPLFYYVEKDDIEGVKKWIKFV-----NDCNDLYETPIFSCLEKDKVNVEILKFLIENGADV-NFKTRDNNLSALHHYL 95 (209)
T ss_pred CcHHHHHHHhCcHHHHHHHHHhh-----hccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCC-CccCCCCCCCHHHHHH
Confidence 36899999999999999998652 346678999999998754 889999999999984 5554 578887
Q ss_pred ---------------CchhhhhccccCCCcHHHHHHH--cCCHHHHHHHHcCCCccccccCCCCChHHHH-HHHcCCHHH
Q 038923 74 ---------------TDSWVVHMMNRNKESALYVAYE--RGRHDVVKQLLNYPSVSLLEMDDGLTTSLHV-AASAGHLGT 135 (140)
Q Consensus 74 ---------------~~~~~~~~~~~~~~t~l~~A~~--~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~-A~~~g~~~~ 135 (140)
..+..++.++..|.||||.|+. .++.+++++|++.|++++.++..|.| |||. |+..++.++
T Consensus 96 ~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t-~Lh~~a~~~~~~~i 174 (209)
T PHA02859 96 SFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNN-ILYSYILFHSDKKI 174 (209)
T ss_pred HhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCc-HHHHHHHhcCCHHH
Confidence 2344567788899999999876 46899999999999999999999999 9995 566888999
Q ss_pred HhhhC
Q 038923 136 FANLV 140 (140)
Q Consensus 136 ~~~Ll 140 (140)
+++|+
T Consensus 175 v~~Ll 179 (209)
T PHA02859 175 FDFLT 179 (209)
T ss_pred HHHHH
Confidence 98874
No 16
>PHA03095 ankyrin-like protein; Provisional
Probab=99.93 E-value=6.8e-25 Score=154.45 Aligned_cols=134 Identities=13% Similarity=0.068 Sum_probs=95.2
Q ss_pred HHHHHHHHcC-CHHHHHHHhhhchHHHhhcCCCCCCcHHHHHH--hhCcHHHHHHHHhhCCcccCCCCCCCCCC------
Q 038923 3 ERLFETILKG-DVPNFLNLVHEDEAIIKQTVPGSSNTILHLAS--RYEHEELALEILKLCPEMLAAPNDKFETP------ 73 (140)
Q Consensus 3 ~~l~~a~~~g-~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~--~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~------ 73 (140)
||||.|+..| ..++++.|++.+.++ +..+..|.||||+|+ ..++.+++++|++.|++ ++..|..|.||
T Consensus 85 TpLh~A~~~~~~~~iv~lLl~~ga~i--n~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad-~~~~d~~g~tpL~~a~~ 161 (471)
T PHA03095 85 TPLHLYLYNATTLDVIKLLIKAGADV--NAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGAD-VNALDLYGMTPLAVLLK 161 (471)
T ss_pred CHHHHHHHcCCcHHHHHHHHHcCCCC--CCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHH
Confidence 5677777777 466667777666655 455666677777766 44456666666666665 34444445444
Q ss_pred --------------------------------------------------------------------------------
Q 038923 74 -------------------------------------------------------------------------------- 73 (140)
Q Consensus 74 -------------------------------------------------------------------------------- 73 (140)
T Consensus 162 ~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~ 241 (471)
T PHA03095 162 SRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVL 241 (471)
T ss_pred cCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHH
Confidence
Q ss_pred ---CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++.++..|+||||+|+..|+.+++++|++.|++++..+..|.| |||.|+..|+.++++.|+
T Consensus 242 ~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~t-pl~~A~~~~~~~~v~~LL 310 (471)
T PHA03095 242 PLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNT-PLSLMVRNNNGRAVRAAL 310 (471)
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCC-HHHHHHHhCCHHHHHHHH
Confidence 011234556778889999999999999999999889999888888888 999999999988888764
No 17
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.92 E-value=2.7e-25 Score=158.09 Aligned_cols=135 Identities=20% Similarity=0.205 Sum_probs=122.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.+|+|.|+..|+.++++.|++.+.++ +..|+.|.||||.||++++.|..+.|++.+++ +.+.|.+|..|
T Consensus 122 ~aplh~A~~~~~~s~L~~Ll~~~~dv--nl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~-~~K~~~~~~~~iH~aa~s~ 198 (929)
T KOG0510|consen 122 NAPLHLAADSGNYSCLKLLLDYGADV--NLEDENGFTPLHLAARKNKVEAKKELINKGAD-PCKSDIDGNFPIHEAARSG 198 (929)
T ss_pred cCchhhccccchHHHHHHHHHhcCCc--cccccCCCchhhHHHhcChHHHHHHHHhcCCC-CCcccCcCCchHHHHHHhc
Confidence 46899999999999999999998666 77888999999999999999988999999998 67888888887
Q ss_pred --------------------------------------------------------------CchhhhhccccCCCcHHH
Q 038923 74 --------------------------------------------------------------TDSWVVHMMNRNKESALY 91 (140)
Q Consensus 74 --------------------------------------------------------------~~~~~~~~~~~~~~t~l~ 91 (140)
..+.+++.+|++|.||||
T Consensus 199 s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH 278 (929)
T KOG0510|consen 199 SKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLH 278 (929)
T ss_pred chhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHH
Confidence 235668889999999999
Q ss_pred HHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 92 VAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 92 ~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+||+.|+.++++.|+.+|++++.++.++.| |||.|+.+|++.+++.||
T Consensus 279 ~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~s-pLH~AA~yg~~ntv~rLL 326 (929)
T KOG0510|consen 279 YAARQGGPESVDNLLGFGASINSKNKDEES-PLHFAAIYGRINTVERLL 326 (929)
T ss_pred HHHHcCChhHHHHHHHcCCcccccCCCCCC-chHHHHHcccHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999875
No 18
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.92 E-value=7.4e-25 Score=162.56 Aligned_cols=136 Identities=20% Similarity=0.164 Sum_probs=118.9
Q ss_pred CCHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCC------
Q 038923 1 MDERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPT------ 74 (140)
Q Consensus 1 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~------ 74 (140)
|.++|+.||..|+.+.++.|++.+.++ +..|..|.||||+|+..|+.+++++|+++|++ ++.+|.+|.||.
T Consensus 525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~--n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad-in~~d~~G~TpL~~A~~~ 601 (823)
T PLN03192 525 MASNLLTVASTGNAALLEELLKAKLDP--DIGDSKGRTPLHIAASKGYEDCVLVLLKHACN-VHIRDANGNTALWNAISA 601 (823)
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcChHHHHHHHHhcCCC-CCCcCCCCCCHHHHHHHh
Confidence 357899999999999999999998877 67889999999999999999999999999998 688999999991
Q ss_pred -chh----hh----hccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 75 -DSW----VV----HMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 75 -~~~----~~----~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.. +. ......+.++||.|+..|+.++++.|++.|++++.+|..|.| |||+|+..|+.+++++|+
T Consensus 602 g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~T-pLh~A~~~g~~~iv~~Ll 675 (823)
T PLN03192 602 KHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGAT-ALQVAMAEDHVDMVRLLI 675 (823)
T ss_pred CCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHCCcHHHHHHHH
Confidence 100 00 111245678999999999999999999999999999999999 999999999999999985
No 19
>PHA02798 ankyrin-like protein; Provisional
Probab=99.92 E-value=1e-24 Score=154.17 Aligned_cols=136 Identities=13% Similarity=0.141 Sum_probs=113.8
Q ss_pred CHHHHHHHHcC---CHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCc---HHHHHHHHhhCCcccCCCCCCCCCCC-
Q 038923 2 DERLFETILKG---DVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEH---EELALEILKLCPEMLAAPNDKFETPT- 74 (140)
Q Consensus 2 ~~~l~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~---~~~~~~Ll~~~~~~~~~~~~~~~~~~- 74 (140)
.||||.|+..| +.+.++.|++.|+++ +..+..|.||||+|+..|+ .+++++|++.|+++....+..|.+|.
T Consensus 110 ~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv--n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh 187 (489)
T PHA02798 110 ETPLYCLLSNGYINNLEILLFMIENGADT--TLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLH 187 (489)
T ss_pred CcHHHHHHHcCCcChHHHHHHHHHcCCCc--cccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHH
Confidence 47899999876 789999999998887 6788899999999999887 89999999999874333344555550
Q ss_pred -----------------------------------------------------------chhhhhccccCCCcHHHHHHH
Q 038923 75 -----------------------------------------------------------DSWVVHMMNRNKESALYVAYE 95 (140)
Q Consensus 75 -----------------------------------------------------------~~~~~~~~~~~~~t~l~~A~~ 95 (140)
....++.+|..|+||||+|+.
T Consensus 188 ~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~ 267 (489)
T PHA02798 188 CYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVS 267 (489)
T ss_pred HHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHH
Confidence 011345678889999999999
Q ss_pred cCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 96 RGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 96 ~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.|+.+++++|++.|++++..+..|.| ||++|+..++.++++.|+
T Consensus 268 ~~~~~~v~~LL~~GAdin~~d~~G~T-pL~~A~~~~~~~iv~~lL 311 (489)
T PHA02798 268 HNNRKIFEYLLQLGGDINIITELGNT-CLFTAFENESKFIFNSIL 311 (489)
T ss_pred cCcHHHHHHHHHcCCcccccCCCCCc-HHHHHHHcCcHHHHHHHH
Confidence 99999999999999999999999999 999999999999998764
No 20
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.92 E-value=4.1e-24 Score=141.33 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=104.1
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcC----CCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchh
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTV----PGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSW 77 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~----~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 77 (140)
.++|+.|++.|+.+.++.|++.|+++ +.. +..|.||||+|+..|+.+++++|+++|+++
T Consensus 34 ~~lL~~A~~~~~~eivk~LL~~GAdi--N~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADV--------------- 96 (300)
T PHA02884 34 ANILYSSIKFHYTDIIDAILKLGADP--EAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADV--------------- 96 (300)
T ss_pred CHHHHHHHHcCCHHHHHHHHHCCCCc--cccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc---------------
Confidence 46899999999999999999999887 433 468999999999999999999999999986
Q ss_pred hhhcc-ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhh
Q 038923 78 VVHMM-NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFAN 138 (140)
Q Consensus 78 ~~~~~-~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~ 138 (140)
+.. +..|.||||.|+..|+.+++++|++.|++++.++..|.| |||.|+..++.+++..
T Consensus 97 --N~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~T-pL~~A~~~~~~~~~~~ 155 (300)
T PHA02884 97 --NRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVT-PIELALMICNNFLAFM 155 (300)
T ss_pred --CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHhCChhHHHH
Confidence 554 457999999999999999999999999999999999999 9999999877665543
No 21
>PHA02795 ankyrin-like protein; Provisional
Probab=99.92 E-value=3e-24 Score=147.31 Aligned_cols=134 Identities=17% Similarity=0.057 Sum_probs=114.7
Q ss_pred CHHHHHHHH--cCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCC-----CCCCCC-
Q 038923 2 DERLFETIL--KGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPN-----DKFETP- 73 (140)
Q Consensus 2 ~~~l~~a~~--~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~-----~~~~~~- 73 (140)
.++||.++. .|+.++++.|+++|+++ +. .++.||+|.|+..|+.+++++|+++|++..+..+ ..+.++
T Consensus 117 ~~~L~~~~~n~~n~~eiV~~LI~~GADI--n~--~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l 192 (437)
T PHA02795 117 QDLLLYYLSNAYVEIDIVDFMVDHGAVI--YK--IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRG 192 (437)
T ss_pred cHHHHHHHHhcCCCHHHHHHHHHCCCCC--CC--CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchh
Confidence 478999999 99999999999999987 33 3568999999999999999999999985433332 224443
Q ss_pred ----------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCC-----
Q 038923 74 ----------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGH----- 132 (140)
Q Consensus 74 ----------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~----- 132 (140)
..++.++.++..|.||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..|+
T Consensus 193 ~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~T-pLh~Aa~~g~~~~~~ 271 (437)
T PHA02795 193 FLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYT-CLDVAVDRGSVIARR 271 (437)
T ss_pred HHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC-HHHHHHHcCCccccc
Confidence 456678899999999999999999999999999999999999999999 9999999984
Q ss_pred ---HHHHhhhC
Q 038923 133 ---LGTFANLV 140 (140)
Q Consensus 133 ---~~~~~~Ll 140 (140)
.+++++|+
T Consensus 272 ~~~~eIvelLL 282 (437)
T PHA02795 272 ETHLKILEILL 282 (437)
T ss_pred ccHHHHHHHHH
Confidence 68998874
No 22
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.92 E-value=1.6e-24 Score=152.87 Aligned_cols=135 Identities=18% Similarity=0.143 Sum_probs=112.7
Q ss_pred CHHHHHHH--HcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhC--cHHHHHHHHhhCCcccCCCCCCCCCC----
Q 038923 2 DERLFETI--LKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYE--HEELALEILKLCPEMLAAPNDKFETP---- 73 (140)
Q Consensus 2 ~~~l~~a~--~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g--~~~~~~~Ll~~~~~~~~~~~~~~~~~---- 73 (140)
.||||.|+ ..|+.++++.|++.+.+. +..+..|.||||+|+..| +.+++++|++.|++ ++..+..|.||
T Consensus 107 ~tpL~~A~~~~~~~~~iv~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~d-in~~d~~g~tpL~~A 183 (480)
T PHA03100 107 ITPLLYAISKKSNSYSIVEYLLDNGANV--NIKNSDGENLLHLYLESNKIDLKILKLLIDKGVD-INAKNRYGYTPLHIA 183 (480)
T ss_pred CchhhHHHhcccChHHHHHHHHHcCCCC--CccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCC-cccccCCCCCHHHHH
Confidence 46888888 889999999988887776 567788899999999988 88999999998887 56777788888
Q ss_pred -------------CchhhhhccccCC------CcHHHHHHHcCC--HHHHHHHHcCCCccccccCCCCChHHHHHHHcCC
Q 038923 74 -------------TDSWVVHMMNRNK------ESALYVAYERGR--HDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGH 132 (140)
Q Consensus 74 -------------~~~~~~~~~~~~~------~t~l~~A~~~~~--~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~ 132 (140)
..+..++..+..+ .||+|.|+..|+ .+++++|++.|++++.++..|.| |||+|+..|+
T Consensus 184 ~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~T-pL~~A~~~~~ 262 (480)
T PHA03100 184 VEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFT-PLHYAVYNNN 262 (480)
T ss_pred HHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCC-HHHHHHHcCC
Confidence 2333345555566 789999999998 99999999999999999988999 9999999999
Q ss_pred HHHHhhhC
Q 038923 133 LGTFANLV 140 (140)
Q Consensus 133 ~~~~~~Ll 140 (140)
.+++++|+
T Consensus 263 ~~iv~~Ll 270 (480)
T PHA03100 263 PEFVKYLL 270 (480)
T ss_pred HHHHHHHH
Confidence 99999874
No 23
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.92 E-value=5.1e-25 Score=149.10 Aligned_cols=117 Identities=20% Similarity=0.239 Sum_probs=64.7
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
+||..|+..|++++|+.|++.+... +.......|||.-||.-||++++++|+++++++ +..
T Consensus 86 ppLWaAsaAGHl~vVk~L~~~ga~V--N~tT~TNStPLraACfDG~leivKyLvE~gad~-----------------~Ia 146 (615)
T KOG0508|consen 86 PPLWAASAAGHLEVVKLLLRRGASV--NDTTRTNSTPLRAACFDGHLEIVKYLVEHGADP-----------------EIA 146 (615)
T ss_pred chhhHHhccCcHHHHHHHHHhcCcc--ccccccCCccHHHHHhcchhHHHHHHHHcCCCC-----------------ccc
Confidence 3566666666666666666666444 323344456666666666666666666666663 344
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
|+.|.|.|++||.+|+.+++++|++.|+|++.++..|.| +||.++..|+++++++|
T Consensus 147 nrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNT-ALH~caEsG~vdivq~L 202 (615)
T KOG0508|consen 147 NRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNT-ALHDCAESGSVDIVQLL 202 (615)
T ss_pred ccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCch-HHHhhhhcccHHHHHHH
Confidence 444444444444444444444444444444444444444 44444444444444444
No 24
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.92 E-value=4.1e-24 Score=151.35 Aligned_cols=137 Identities=12% Similarity=0.105 Sum_probs=105.0
Q ss_pred CHHHHHHHHc---CCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhh--CcHHHHHHHHhhCCcccCCCCCCCCCC---
Q 038923 2 DERLFETILK---GDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRY--EHEELALEILKLCPEMLAAPNDKFETP--- 73 (140)
Q Consensus 2 ~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~--g~~~~~~~Ll~~~~~~~~~~~~~~~~~--- 73 (140)
.||||.|+.. |+.++++.|++.|.++. +..+..|+||||+|+.. ++.+++++|++.|+++....+..|.||
T Consensus 109 ~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin-~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~ 187 (494)
T PHA02989 109 VSPIVCFIYNSNINNCDMLRFLLSKGINVN-DVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNI 187 (494)
T ss_pred CcHHHHHHHhcccCcHHHHHHHHHCCCCcc-cccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHH
Confidence 3677766654 56778888888776651 24566778888877643 467778888877776433355566665
Q ss_pred --------------------------------------------------------CchhhhhccccCCCcHHHHHHHcC
Q 038923 74 --------------------------------------------------------TDSWVVHMMNRNKESALYVAYERG 97 (140)
Q Consensus 74 --------------------------------------------------------~~~~~~~~~~~~~~t~l~~A~~~~ 97 (140)
.....++.+|..|+||||+|+..|
T Consensus 188 a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~ 267 (494)
T PHA02989 188 YLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVD 267 (494)
T ss_pred HHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhc
Confidence 001224667788999999999999
Q ss_pred CHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 98 RHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 98 ~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.+++++|++.|++++.++..|.| |||+|+..|+.++++.|+
T Consensus 268 ~~~~v~~LL~~Gadin~~d~~G~T-pL~~A~~~~~~~iv~~LL 309 (494)
T PHA02989 268 NYEAFNYLLKLGDDIYNVSKDGDT-VLTYAIKHGNIDMLNRIL 309 (494)
T ss_pred CHHHHHHHHHcCCCccccCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999 999999999999999875
No 25
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.92 E-value=1.6e-24 Score=154.14 Aligned_cols=137 Identities=24% Similarity=0.305 Sum_probs=118.4
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHH-------------HhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCC
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAI-------------IKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPND 68 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~-------------~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~ 68 (140)
.+|||.|+..|++++++.+++.+... ..+..|.+|.||||+||+.|+.++++.|+..|++ ++.++.
T Consensus 226 ~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~-I~~kn~ 304 (929)
T KOG0510|consen 226 ATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGAS-INSKNK 304 (929)
T ss_pred CcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCc-ccccCC
Confidence 36899999999999999998865332 2235788999999999999999999999999999 788889
Q ss_pred CCCCC-------------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccc---cccCCCCChHHHH
Q 038923 69 KFETP-------------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSL---LEMDDGLTTSLHV 126 (140)
Q Consensus 69 ~~~~~-------------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~---~~~~~~~t~~l~~ 126 (140)
++.+| .+.-+.+..|..|.||+|.|+..||..+++.|++.|+... ..|.+|.| |||.
T Consensus 305 d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~T-aLH~ 383 (929)
T KOG0510|consen 305 DEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNT-ALHL 383 (929)
T ss_pred CCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCch-hhhH
Confidence 99999 1223467788899999999999999999999999998877 44878999 9999
Q ss_pred HHHcCCHHHHhhhC
Q 038923 127 AASAGHLGTFANLV 140 (140)
Q Consensus 127 A~~~g~~~~~~~Ll 140 (140)
|+..|+..++++|+
T Consensus 384 Aa~~g~~~av~~Li 397 (929)
T KOG0510|consen 384 AAKYGNTSAVQKLI 397 (929)
T ss_pred HHHhccHHHHHHHH
Confidence 99999999999874
No 26
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.92 E-value=4.2e-24 Score=150.74 Aligned_cols=132 Identities=17% Similarity=0.031 Sum_probs=111.3
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.+.++.|++.++++ +..+..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||
T Consensus 169 ~tpLh~A~~~~~~~iv~~Ll~~gad~--n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~-in~~d~~g~TpLh~A~~~~ 245 (477)
T PHA02878 169 NTALHYATENKDQRLTELLLSYGANV--NIPDKTNNSPLHHAVKHYNKPIVHILLENGAS-TDARDKCGNTPLHISVGYC 245 (477)
T ss_pred CCHHHHHHhCCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhc
Confidence 47999999999999999999998877 67888999999999999999999999999998 67888899998
Q ss_pred ----------Cchhhhhcccc-CCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcC-CHHHHhhh
Q 038923 74 ----------TDSWVVHMMNR-NKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAG-HLGTFANL 139 (140)
Q Consensus 74 ----------~~~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g-~~~~~~~L 139 (140)
..+..++.++. .|.||||+| .++.+++++|++.|++++..+..|.| |||.|+..+ ..+++++|
T Consensus 246 ~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~T-pL~~A~~~~~~~~~~~~l 320 (477)
T PHA02878 246 KDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLT-PLSSAVKQYLCINIGRIL 320 (477)
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCC-HHHHHHHHcCccchHHHH
Confidence 22333455554 689999999 56788999999999999999999999 999998754 45555554
No 27
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.91 E-value=6.7e-25 Score=148.52 Aligned_cols=118 Identities=22% Similarity=0.251 Sum_probs=111.5
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
+|||..||..|+++.+++|++++.++ ++.++.|.|.||+||.+||.+|+++|++.|+++ +.
T Consensus 118 StPLraACfDG~leivKyLvE~gad~--~IanrhGhTcLmIa~ykGh~~I~qyLle~gADv-----------------n~ 178 (615)
T KOG0508|consen 118 STPLRAACFDGHLEIVKYLVEHGADP--EIANRHGHTCLMIACYKGHVDIAQYLLEQGADV-----------------NA 178 (615)
T ss_pred CccHHHHHhcchhHHHHHHHHcCCCC--cccccCCCeeEEeeeccCchHHHHHHHHhCCCc-----------------ch
Confidence 48999999999999999999999888 788999999999999999999999999999997 78
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
++..|.|+||.|+..|+.+++++|+++|+.++... .|-| ||..|+..|+.++|++|+
T Consensus 179 ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~-~Gmt-PL~~Aa~tG~~~iVe~L~ 235 (615)
T KOG0508|consen 179 KSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDG-HGMT-PLLLAAVTGHTDIVERLL 235 (615)
T ss_pred hcccCchHHHhhhhcccHHHHHHHHhCCceeeecC-CCCc-hHHHHhhhcchHHHHHHh
Confidence 89999999999999999999999999999887666 6999 999999999999999885
No 28
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.91 E-value=3.4e-24 Score=130.66 Aligned_cols=121 Identities=12% Similarity=0.047 Sum_probs=99.1
Q ss_pred CHHHHHHHHcCCHHHHHHHhhh---chHHHhhcCCCCCCcHHHHHHhhCcH---HHHHHHHhhCCcccCCCCCCCCCCCc
Q 038923 2 DERLFETILKGDVPNFLNLVHE---DEAIIKQTVPGSSNTILHLASRYEHE---ELALEILKLCPEMLAAPNDKFETPTD 75 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~---~~~~~~~~~~~~g~t~l~~A~~~g~~---~~~~~Ll~~~~~~~~~~~~~~~~~~~ 75 (140)
.||||+|++.|+.+.+...... .........+..|.||||+|+..|+. +++++|++.|+++
T Consensus 18 ~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi------------- 84 (154)
T PHA02736 18 ENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI------------- 84 (154)
T ss_pred CCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCc-------------
Confidence 4799999999995443222111 11122244678999999999999986 5789999999986
Q ss_pred hhhhhccc-cCCCcHHHHHHHcCCHHHHHHHHc-CCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 76 SWVVHMMN-RNKESALYVAYERGRHDVVKQLLN-YPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 76 ~~~~~~~~-~~~~t~l~~A~~~~~~~~~~~L~~-~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.++ ..|+||||+|+..|+.+++++|++ .|++++.++..|+| |||+|+..|+.+++++|+
T Consensus 85 ----n~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~t-pL~~A~~~~~~~i~~~Ll 146 (154)
T PHA02736 85 ----NGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKT-PYYVACERHDAKMMNILR 146 (154)
T ss_pred ----cccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 5666 489999999999999999999997 59999999999999 999999999999999874
No 29
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.91 E-value=2.9e-24 Score=149.36 Aligned_cols=132 Identities=19% Similarity=0.158 Sum_probs=102.5
Q ss_pred HHHHHHHcCCHHHHHHHhhh-chHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 4 RLFETILKGDVPNFLNLVHE-DEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
.++.|+..|+++.++.+++. +... +..|++|.|+||+|+.+++++++++|+++|+++....-.-+.||
T Consensus 47 ~~v~A~q~G~l~~v~~lve~~g~~v--~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~ 124 (600)
T KOG0509|consen 47 DIVKATQYGELETVKELVESEGESV--NNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH 124 (600)
T ss_pred hhhhHhhcchHHHHHHHHhhcCcCC--CCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence 57899999999999999998 4443 56788999999999999999999999999999543333556666
Q ss_pred --------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhh
Q 038923 74 --------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFAN 138 (140)
Q Consensus 74 --------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~ 138 (140)
..+++...+|.+|.+|+|+|++.|+.-++-+|+..+++++.+|.+|+| |||||+.+|+...++.
T Consensus 125 ~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grT-pLmwAaykg~~~~v~~ 196 (600)
T KOG0509|consen 125 ISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRT-PLMWAAYKGFALFVRR 196 (600)
T ss_pred HHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCC-HHHHHHHhcccHHHHH
Confidence 455556677777777777777777777777777777777777777777 7777777777553433
No 30
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.91 E-value=2.9e-23 Score=132.19 Aligned_cols=126 Identities=9% Similarity=0.085 Sum_probs=108.2
Q ss_pred CHHHHHHHHcC--CHHHHHHHhhhchHHHhhcCC-CCCCcHHHHHHhh---CcHHHHHHHHhhCCcccCCCCCCCCCC--
Q 038923 2 DERLFETILKG--DVPNFLNLVHEDEAIIKQTVP-GSSNTILHLASRY---EHEELALEILKLCPEMLAAPNDKFETP-- 73 (140)
Q Consensus 2 ~~~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~~-~~g~t~l~~A~~~---g~~~~~~~Ll~~~~~~~~~~~~~~~~~-- 73 (140)
.||||.|+..+ +.++++.|++.++++ +..+ ..|.||||+|+.. ++.+++++|+++|++ ++.+|..|.||
T Consensus 52 ~TpLh~a~~~~~~~~eiv~~Ll~~gadv--n~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gad-in~~d~~G~TpLh 128 (209)
T PHA02859 52 ETPIFSCLEKDKVNVEILKFLIENGADV--NFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSS-ITEEDEDGKNLLH 128 (209)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHCCCCC--CccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCC-CCCcCCCCCCHHH
Confidence 58999999854 899999999998887 4454 5799999998764 479999999999998 68899999999
Q ss_pred -----------------CchhhhhccccCCCcHHHH-HHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcC
Q 038923 74 -----------------TDSWVVHMMNRNKESALYV-AYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAG 131 (140)
Q Consensus 74 -----------------~~~~~~~~~~~~~~t~l~~-A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g 131 (140)
..+..++.++..|.||||. |+..++.+++++|++.|++++.++..|.| ||++|..++
T Consensus 129 ~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~t-pl~la~~~~ 203 (209)
T PHA02859 129 MYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYN-CYDLIKFRN 203 (209)
T ss_pred HHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCC-HHHHHhhhh
Confidence 2334467788899999996 56788999999999999999999999999 999998765
No 31
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.90 E-value=3.8e-23 Score=150.09 Aligned_cols=135 Identities=16% Similarity=0.046 Sum_probs=110.4
Q ss_pred CHHHHHHHH--cCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCc--HHHHHHHHhhCCcccCCCCCCCCCCCc--
Q 038923 2 DERLFETIL--KGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEH--EELALEILKLCPEMLAAPNDKFETPTD-- 75 (140)
Q Consensus 2 ~~~l~~a~~--~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~--~~~~~~Ll~~~~~~~~~~~~~~~~~~~-- 75 (140)
.||||.|+. .++.+.++.|++.+.++ +..+..|.||||+|+..|+ .+++++|++.|++ ++.++..|.||..
T Consensus 178 ~TpLH~A~~n~~~~~eIVklLLe~GADV--N~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GAD-VN~kD~~G~TPLh~A 254 (764)
T PHA02716 178 YGILHAYLGNMYVDIDILEWLCNNGVNV--NLQNNHLITPLHTYLITGNVCASVIKKIIELGGD-MDMKCVNGMSPIMTY 254 (764)
T ss_pred CcHHHHHHHhccCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHH
Confidence 378998764 46789999999998887 6788899999999999995 5899999999998 6788889999811
Q ss_pred ----------------------------------------------------hhhhhccccCCCcHHHHHHH--cCCHHH
Q 038923 76 ----------------------------------------------------SWVVHMMNRNKESALYVAYE--RGRHDV 101 (140)
Q Consensus 76 ----------------------------------------------------~~~~~~~~~~~~t~l~~A~~--~~~~~~ 101 (140)
+..++.++..|+||||+|+. .++.++
T Consensus 255 i~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eI 334 (764)
T PHA02716 255 IINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDI 334 (764)
T ss_pred HHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchH
Confidence 12235567788999998764 457899
Q ss_pred HHHHHcCCCccccccCCCCChHHHHHHH--------------cCCHHHHhhhC
Q 038923 102 VKQLLNYPSVSLLEMDDGLTTSLHVAAS--------------AGHLGTFANLV 140 (140)
Q Consensus 102 ~~~L~~~~~~~~~~~~~~~t~~l~~A~~--------------~g~~~~~~~Ll 140 (140)
+++|++.|++++.++..|+| |||+|+. .++.+++++|+
T Consensus 335 VklLLe~GADIN~kD~~G~T-PLH~A~~~lav~~~ld~~~~~~~~~eVVklLL 386 (764)
T PHA02716 335 IKLLHEYGNDLNEPDNIGNT-VLHTYLSMLSVVNILDPETDNDIRLDVIQCLI 386 (764)
T ss_pred HHHHHHcCCCCccCCCCCCC-HHHHHHHhhhhhccccccccccChHHHHHHHH
Confidence 99999999999999989999 9998865 36788888874
No 32
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.90 E-value=2.8e-23 Score=124.42 Aligned_cols=117 Identities=21% Similarity=0.162 Sum_probs=105.1
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccc
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMN 83 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (140)
-+.+|+..+.++.|+.|++..+..++ ..|.+|.||||-|+..||.+|++.|+..|++. +.+.
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vN-trD~D~YTpLHRAaYn~h~div~~ll~~gAn~-----------------~a~T 127 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVN-TRDEDEYTPLHRAAYNGHLDIVHELLLSGANK-----------------EAKT 127 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhcccccc-ccccccccHHHHHHhcCchHHHHHHHHccCCc-----------------cccc
Confidence 36789999999999999999888754 68999999999999999999999999999986 7888
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHH-HHhhh
Q 038923 84 RNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLG-TFANL 139 (140)
Q Consensus 84 ~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~-~~~~L 139 (140)
..||||||.||..++.+++..|+.+|+|++.......| |||+|+...+.. .+++|
T Consensus 128 ~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~lt-pLhlaa~~rn~r~t~~~L 183 (228)
T KOG0512|consen 128 NEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLT-PLHLAAGNRNSRDTLELL 183 (228)
T ss_pred ccCccchhhhhcccchhHHHHHHhccCcccccccccch-hhHHhhcccchHHHHHHH
Confidence 99999999999999999999999999999999977777 999999877643 45544
No 33
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.89 E-value=1.1e-22 Score=147.80 Aligned_cols=135 Identities=11% Similarity=0.001 Sum_probs=114.2
Q ss_pred CHHHHHHHHcCC--HHHHHHHhhhchHHHhhcCCCCCCcHHHHH------------------------------------
Q 038923 2 DERLFETILKGD--VPNFLNLVHEDEAIIKQTVPGSSNTILHLA------------------------------------ 43 (140)
Q Consensus 2 ~~~l~~a~~~g~--~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A------------------------------------ 43 (140)
.||||.|++.|+ .++++.|++.|+++ +..+..|+||||+|
T Consensus 213 ~TPLH~Aa~~g~~~~eIVklLLe~GADV--N~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~ 290 (764)
T PHA02716 213 ITPLHTYLITGNVCASVIKKIIELGGDM--DMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYIT 290 (764)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHH
Confidence 479999999995 48999999999887 67889999999975
Q ss_pred -HhhCcHHHHHHHHhhCCcccCCCCCCCCCC-------------------CchhhhhccccCCCcHHHHHHH--------
Q 038923 44 -SRYEHEELALEILKLCPEMLAAPNDKFETP-------------------TDSWVVHMMNRNKESALYVAYE-------- 95 (140)
Q Consensus 44 -~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~t~l~~A~~-------- 95 (140)
+..|+.+++++|++.|++ ++.+|..|.|| ..+..++.++..|+||||+|+.
T Consensus 291 AA~~g~leiVklLLe~GAd-IN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~l 369 (764)
T PHA02716 291 LARNIDISVVYSFLQPGVK-LHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNIL 369 (764)
T ss_pred HHHcCCHHHHHHHHhCCCc-eeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccc
Confidence 445788999999999998 68889999999 2344567889999999999875
Q ss_pred ------cCCHHHHHHHHcCCCccccccCCCCChHHHHH----HHcCCHHHHhhhC
Q 038923 96 ------RGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVA----ASAGHLGTFANLV 140 (140)
Q Consensus 96 ------~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A----~~~g~~~~~~~Ll 140 (140)
.++.+++++|++.|++++.++..|.| |||.+ ...++.+++++|+
T Consensus 370 d~~~~~~~~~eVVklLL~~GADIn~kn~~G~T-PLh~y~~~a~n~~~~dIvklLi 423 (764)
T PHA02716 370 DPETDNDIRLDVIQCLISLGADITAVNCLGYT-PLTSYICTAQNYMYYDIIDCLI 423 (764)
T ss_pred cccccccChHHHHHHHHHCCCCCCCcCCCCCC-hHHHHHHHHHhcChHHHHHHHH
Confidence 36899999999999999999999999 99942 2356788988874
No 34
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.89 E-value=1.6e-22 Score=112.58 Aligned_cols=89 Identities=24% Similarity=0.275 Sum_probs=78.4
Q ss_pred HHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcccc
Q 038923 5 LFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNR 84 (140)
Q Consensus 5 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (140)
||.|++.|+.++++.|++.+.+. +. |.||||+|+..|+.+++++|++.|.++ +.++.
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~--~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~-----------------~~~~~ 57 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADI--NL----GNTALHYAAENGNLEIVKLLLENGADI-----------------NSQDK 57 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTT--TS----SSBHHHHHHHTTTHHHHHHHHHTTTCT-----------------T-BST
T ss_pred CHHHHHcCCHHHHHHHHHCcCCC--CC----CCCHHHHHHHcCCHHHHHHHHHhcccc-----------------cccCC
Confidence 78999999999999999976555 22 889999999999999999999999986 67889
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHcCCCcccccc
Q 038923 85 NKESALYVAYERGRHDVVKQLLNYPSVSLLEM 116 (140)
Q Consensus 85 ~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~ 116 (140)
.|+||||+|+.+|+.+++++|+++|++++.+|
T Consensus 58 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 58 NGNTALHYAAENGNLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp TSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 99999999999999999999999999988764
No 35
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.89 E-value=3.4e-22 Score=146.27 Aligned_cols=133 Identities=15% Similarity=0.088 Sum_probs=103.3
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
+.++.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.+|
T Consensus 147 ~~l~~~i~~~~~~i~k~Ll~~Gadv--n~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad-~n~~~~~g~t~L~~A~~~~~ 223 (682)
T PHA02876 147 KLIKERIQQDELLIAEMLLEGGADV--NAKDIYCITPIHYAAERGNAKMVNLLLSYGAD-VNIIALDDLSVLECAVDSKN 223 (682)
T ss_pred HHHHHHHHCCcHHHHHHHHhCCCCC--CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-cCccCCCCCCHHHHHHHcCC
Confidence 4577888888888888888888776 66778888999999999999999999888887 56677777777
Q ss_pred -------------------------------------CchhhhhccccCCCcHHHHHHHcCCH-HHHHHHHcCCCccccc
Q 038923 74 -------------------------------------TDSWVVHMMNRNKESALYVAYERGRH-DVVKQLLNYPSVSLLE 115 (140)
Q Consensus 74 -------------------------------------~~~~~~~~~~~~~~t~l~~A~~~~~~-~~~~~L~~~~~~~~~~ 115 (140)
..+..++..+..|.||||+|+..|+. +++++|++.|++++..
T Consensus 224 ~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~ 303 (682)
T PHA02876 224 IDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAK 303 (682)
T ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCc
Confidence 00112345566788888888888875 4788888888888888
Q ss_pred cCCCCChHHHHHHHcC-CHHHHhhh
Q 038923 116 MDDGLTTSLHVAASAG-HLGTFANL 139 (140)
Q Consensus 116 ~~~~~t~~l~~A~~~g-~~~~~~~L 139 (140)
+..|.| |||+|+..| +.++++.|
T Consensus 304 d~~g~T-pLh~Aa~~g~~~~~v~~L 327 (682)
T PHA02876 304 NIKGET-PLYLMAKNGYDTENIRTL 327 (682)
T ss_pred CCCCCC-HHHHHHHhCCCHHHHHHH
Confidence 888888 888888888 47777665
No 36
>PHA02946 ankyin-like protein; Provisional
Probab=99.89 E-value=3.3e-22 Score=139.80 Aligned_cols=133 Identities=15% Similarity=0.133 Sum_probs=109.7
Q ss_pred HHHHHHH--HcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCC------
Q 038923 3 ERLFETI--LKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPT------ 74 (140)
Q Consensus 3 ~~l~~a~--~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~------ 74 (140)
+.||.++ ..++.+.++.|++.+.++ +..+..|.||||+|+..|+.+++++|+++|++ ++.+|.+|.||.
T Consensus 39 ~~Lh~~~~~~~~~~~iv~~Ll~~Gadv--n~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAd-in~~d~~g~TpLh~A~~~ 115 (446)
T PHA02946 39 HILHAYCGIKGLDERFVEELLHRGYSP--NETDDDGNYPLHIASKINNNRIVAMLLTHGAD-PNACDKQHKTPLYYLSGT 115 (446)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHCcCCC--CccCCCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHc
Confidence 4677655 455788999999998887 67889999999999999999999999999998 678899999991
Q ss_pred -------------chhhhh-ccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCC--HHHHhh
Q 038923 75 -------------DSWVVH-MMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGH--LGTFAN 138 (140)
Q Consensus 75 -------------~~~~~~-~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~--~~~~~~ 138 (140)
.++.++ ..+..|.|||+ |+..|+.+++++|++.|++++.++..|+| |||+|+..++ .+++++
T Consensus 116 ~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t-~Lh~A~~~~~~~~~~v~~ 193 (446)
T PHA02946 116 DDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKN-HIHRHLMSDNPKASTISW 193 (446)
T ss_pred CCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCC-HHHHHHHhcCCCHHHHHH
Confidence 122233 35778899997 66778999999999999999999999999 9999887554 577877
Q ss_pred hC
Q 038923 139 LV 140 (140)
Q Consensus 139 Ll 140 (140)
|+
T Consensus 194 Ll 195 (446)
T PHA02946 194 MM 195 (446)
T ss_pred HH
Confidence 63
No 37
>PHA03095 ankyrin-like protein; Provisional
Probab=99.88 E-value=3.2e-22 Score=141.00 Aligned_cols=118 Identities=14% Similarity=0.036 Sum_probs=69.6
Q ss_pred CHHHHHHHHcC---CHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhC-cHHHHHHHHhhCCcccCCCCCCCCCCCchh
Q 038923 2 DERLFETILKG---DVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYE-HEELALEILKLCPEMLAAPNDKFETPTDSW 77 (140)
Q Consensus 2 ~~~l~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g-~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 77 (140)
.||||.|+..| +.+.++.|++.+.++ +..+..|.||||+|+..| +.+++++|++.|++ +
T Consensus 48 ~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadi--n~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~-i-------------- 110 (471)
T PHA03095 48 KTPLHLYLHYSSEKVKDIVRLLLEAGADV--NAPERCGFTPLHLYLYNATTLDVIKLLIKAGAD-V-------------- 110 (471)
T ss_pred CCHHHHHHHhcCCChHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCC-C--------------
Confidence 35777777776 777777777776665 555667777777777777 47777777777776 3
Q ss_pred hhhccccCCCcHHHHHH--HcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcC--CHHHHhhh
Q 038923 78 VVHMMNRNKESALYVAY--ERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAG--HLGTFANL 139 (140)
Q Consensus 78 ~~~~~~~~~~t~l~~A~--~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g--~~~~~~~L 139 (140)
+.++..|.||||+|+ ..++.+++++|++.|++++..+..|.| |||+|+..+ +.+++++|
T Consensus 111 --n~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~t-pL~~a~~~~~~~~~iv~~L 173 (471)
T PHA03095 111 --NAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMT-PLAVLLKSRNANVELLRLL 173 (471)
T ss_pred --CCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCC-HHHHHHHcCCCCHHHHHHH
Confidence 344444555555555 233445555555555555555545555 555544433 23444443
No 38
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.88 E-value=4.2e-23 Score=135.97 Aligned_cols=112 Identities=27% Similarity=0.245 Sum_probs=98.6
Q ss_pred HhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------------------Cchhhhhccc-cC
Q 038923 28 IKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP---------------------TDSWVVHMMN-RN 85 (140)
Q Consensus 28 ~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~-~~ 85 (140)
..++-|..|+|+|||++..+++++|+.||..|.-..+.++..|+|| ..-..+|.+- ..
T Consensus 260 vVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~ 339 (452)
T KOG0514|consen 260 VVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQH 339 (452)
T ss_pred HhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhh
Confidence 5578889999999999999999999999999986689999999999 1111234433 46
Q ss_pred CCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 86 KESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 86 ~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
|.|+|++|+.+|+.++++.|+..|+|+|.+|.+|.| +|++|+.+||.|++++||
T Consensus 340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGST-ALMCA~EHGhkEivklLL 393 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGST-ALMCAAEHGHKEIVKLLL 393 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccH-HHhhhhhhChHHHHHHHh
Confidence 899999999999999999999999999999999999 999999999999999986
No 39
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.88 E-value=5.8e-22 Score=145.04 Aligned_cols=125 Identities=15% Similarity=0.117 Sum_probs=91.2
Q ss_pred HHHHHHHHc-CCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 3 ERLFETILK-GDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 3 ~~l~~a~~~-g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
||||.|+.. ++.+.++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||
T Consensus 343 TpLh~A~~~~~~~~iv~lLl~~gadi--n~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad-~~~~~~~g~T~Lh~A~~~~ 419 (682)
T PHA02876 343 TPLHQASTLDRNKDIVITLLELGANV--NARDYCDKTPIHYAAVRNNVVIINTLLDYGAD-IEALSQKIGTALHFALCGT 419 (682)
T ss_pred cHHHHHHHhCCcHHHHHHHHHcCCCC--ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-ccccCCCCCchHHHHHHcC
Confidence 466666654 3455556666665555 55677788888888888888888888888877 56666777777
Q ss_pred ----------CchhhhhccccCCCcHHHHHHHcC-CHHHHHHHHcCCCccccccCCCCChHHHHHHHcC
Q 038923 74 ----------TDSWVVHMMNRNKESALYVAYERG-RHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAG 131 (140)
Q Consensus 74 ----------~~~~~~~~~~~~~~t~l~~A~~~~-~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g 131 (140)
..+..++.++..|+||||+|+..| +.+++++|++.|++++..+..|.| |++.|+.++
T Consensus 420 ~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~t-pl~~a~~~~ 487 (682)
T PHA02876 420 NPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQY-PLLIALEYH 487 (682)
T ss_pred CHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHhC
Confidence 123345677788888888888766 578888888888888888888888 888887654
No 40
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.87 E-value=2.9e-22 Score=148.83 Aligned_cols=118 Identities=22% Similarity=0.235 Sum_probs=104.7
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
+++|.|...+....++.+++.+... +..+..|+||||+||.+|++.+|++|+++|+++ +.+
T Consensus 509 ~~lhla~~~~~v~~~~~l~~~ga~v--~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv-----------------~ak 569 (1143)
T KOG4177|consen 509 TPLHLAADEDTVKVAKILLEHGANV--DLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADV-----------------NAK 569 (1143)
T ss_pred chhhhhhhhhhHHHHHHHhhcCCce--ehhcccccchHHHHHhcCCchHHHHhhhCCccc-----------------ccc
Confidence 4567777777777777777776655 456778999999999999999999999999987 788
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
++.|+||||.||..|+.++++.|+++|++++..+.+|.| ||++|+..|+.++++.|+
T Consensus 570 ~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~T-pL~iA~~lg~~~~~k~l~ 626 (1143)
T KOG4177|consen 570 DKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFT-PLHIAVRLGYLSVVKLLK 626 (1143)
T ss_pred CCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcc-hhHHHHHhcccchhhHHH
Confidence 899999999999999999999999999999999999999 999999999999998763
No 41
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.87 E-value=3e-22 Score=124.20 Aligned_cols=116 Identities=19% Similarity=0.174 Sum_probs=100.6
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.|||.+|++.|+++.|+.|++.++++ +...+...++|.+|++.|..++|++|+.++.++ |.
T Consensus 161 fTpLiWAaa~G~i~vV~fLL~~GAdp--~~lgk~resALsLAt~ggytdiV~lLL~r~vdV-----------------Nv 221 (296)
T KOG0502|consen 161 FTPLIWAAAKGHIPVVQFLLNSGADP--DALGKYRESALSLATRGGYTDIVELLLTREVDV-----------------NV 221 (296)
T ss_pred chHhHHHHhcCchHHHHHHHHcCCCh--hhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCc-----------------ce
Confidence 36888888888888888888888777 556667778888888888888888888888876 78
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhh
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFAN 138 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~ 138 (140)
.|.+|-|||-+|++.|+.+|++.|++.|+++...++.|.+ ++..|+..|+. +|+.
T Consensus 222 yDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~-~mdlAValGyr-~Vqq 276 (296)
T KOG0502|consen 222 YDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYW-IMDLAVALGYR-IVQQ 276 (296)
T ss_pred eccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCc-HHHHHHHhhhH-HHHH
Confidence 8999999999999999999999999999999999999999 99999999987 4443
No 42
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.87 E-value=2.2e-21 Score=137.47 Aligned_cols=136 Identities=10% Similarity=-0.012 Sum_probs=92.9
Q ss_pred CHHHHHHHHcC------CHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhh---CcHHHHHHHHhhCCcccCCCCCCCCC
Q 038923 2 DERLFETILKG------DVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRY---EHEELALEILKLCPEMLAAPNDKFET 72 (140)
Q Consensus 2 ~~~l~~a~~~g------~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~---g~~~~~~~Ll~~~~~~~~~~~~~~~~ 72 (140)
+||||.|+..+ ..++++.|++.|+++ +..+..|.||||.|+.. |+.+++++|+++|+++.+.+|..|.|
T Consensus 70 ~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadi--n~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~t 147 (494)
T PHA02989 70 ETPLCAVLRNREITSNKIKKIVKLLLKFGADI--NLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYN 147 (494)
T ss_pred CCcHHHHHhccCcchhhHHHHHHHHHHCCCCC--CCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCC
Confidence 46777776654 356777788877776 56677788888876554 56788888888888743677777888
Q ss_pred C-------------------Cchhhhhc-cccCCCcHHHHHHHcC----CHHHHHHHHcCCCccccc-------------
Q 038923 73 P-------------------TDSWVVHM-MNRNKESALYVAYERG----RHDVVKQLLNYPSVSLLE------------- 115 (140)
Q Consensus 73 ~-------------------~~~~~~~~-~~~~~~t~l~~A~~~~----~~~~~~~L~~~~~~~~~~------------- 115 (140)
| ..+..++. .+..|.||||.|+..+ +.+++++|++.|++++..
T Consensus 148 pLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~ 227 (494)
T PHA02989 148 LLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLD 227 (494)
T ss_pred HHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHH
Confidence 7 11222333 4556778888776543 777788887777665433
Q ss_pred -------------------------cCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 116 -------------------------MDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 116 -------------------------~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+..|+| |||+|+..|+.+++++|+
T Consensus 228 ~~~~~~~~~~~il~~l~~~advn~~d~~G~T-pL~~Aa~~~~~~~v~~LL 276 (494)
T PHA02989 228 NNKILSKKEFKVLNFILKYIKINKKDKKGFN-PLLISAKVDNYEAFNYLL 276 (494)
T ss_pred hchhhcccchHHHHHHHhCCCCCCCCCCCCC-HHHHHHHhcCHHHHHHHH
Confidence 334777 888888888888888764
No 43
>PHA02917 ankyrin-like protein; Provisional
Probab=99.86 E-value=4e-21 Score=139.31 Aligned_cols=129 Identities=14% Similarity=-0.016 Sum_probs=99.1
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHH--HhhCcHHHHHHHHhhCCcccCCCC---CCCCCCCchh
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLA--SRYEHEELALEILKLCPEMLAAPN---DKFETPTDSW 77 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A--~~~g~~~~~~~Ll~~~~~~~~~~~---~~~~~~~~~~ 77 (140)
.+++.|+..|+.++++.|++.+.++ +..+..|.||||.| +..|+.+++++|+++|+++ +.+| ..|.+.
T Consensus 105 ~~~~~a~~~~~~e~vk~Ll~~Gadi--n~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~v-n~~d~~~~~g~~~---- 177 (661)
T PHA02917 105 IFSYMKSKNVDVDLIKVLVEHGFDL--SVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSV-LYEDEDDEYGYAY---- 177 (661)
T ss_pred hHHHHHhhcCCHHHHHHHHHcCCCC--CccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCc-ccccccccccccc----
Confidence 3456788888888888888888777 66778899999854 3578899999999998874 2222 112111
Q ss_pred hhhccccCCCcHHHHHHH-----------cCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCH--HHHhhhC
Q 038923 78 VVHMMNRNKESALYVAYE-----------RGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHL--GTFANLV 140 (140)
Q Consensus 78 ~~~~~~~~~~t~l~~A~~-----------~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~--~~~~~Ll 140 (140)
.......+.||||+|+. +++.+++++|++.|++++.++..|.| |||+|+..|+. |++++|+
T Consensus 178 -~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~T-pLh~A~~~g~~~~eivk~Li 251 (661)
T PHA02917 178 -DDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCT-ALQYYIKSSHIDIDIVKLLM 251 (661)
T ss_pred -ccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCc-HHHHHHHcCCCcHHHHHHHH
Confidence 01123345799999986 46899999999999999999999999 99999999985 7999874
No 44
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.85 E-value=4.7e-20 Score=108.06 Aligned_cols=119 Identities=26% Similarity=0.320 Sum_probs=108.5
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.++||.|++.|+.+.++.|++.+... ...+..|.+|+|+|+..+..+++++|++.+... +.
T Consensus 8 ~t~l~~a~~~~~~~~i~~li~~~~~~--~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~-----------------~~ 68 (126)
T cd00204 8 RTPLHLAASNGHLEVVKLLLENGADV--NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADV-----------------NA 68 (126)
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCC--CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc-----------------cc
Confidence 47999999999999999999987765 457789999999999999999999999999754 55
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.+..+.+|+|+|+..++.+++++|++.+.+.+..+..+.| |++.|...++.+++++|+
T Consensus 69 ~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 69 RDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRT-PLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCC-HHHHHHhcCCHHHHHHhC
Confidence 6788899999999999999999999999888889989999 999999999999999985
No 45
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.85 E-value=2.4e-21 Score=144.05 Aligned_cols=135 Identities=26% Similarity=0.163 Sum_probs=113.5
Q ss_pred CHHHHHHHHcC-CHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-------
Q 038923 2 DERLFETILKG-DVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g-~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~------- 73 (140)
.|++|.|+..| ..+....++..+..+ +....+|.||||+|++.||.++++.+++.++. .......+.++
T Consensus 441 ~T~lhvaa~~g~~~~~~~~l~~~g~~~--n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~-~~~~~~~~l~~lhla~~~ 517 (1143)
T KOG4177|consen 441 YTPLHVAAKKGRYLQIARLLLQYGADP--NAVSKQGFTPLHLAAQEGHTEVVQLLLEGGAN-DNLDAKKGLTPLHLAADE 517 (1143)
T ss_pred CChhhhhhhcccHhhhhhhHhhcCCCc--chhccccCcchhhhhccCCchHHHHhhhcCCc-cCccchhccchhhhhhhh
Confidence 36889999999 566666666666555 66778899999999999999999999988864 45555566666
Q ss_pred ----------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ----------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ----------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++.++..+.||||.||.+|+.++|++|+++|++++.++..|+| |||.|+..|+.+++++|+
T Consensus 518 ~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~T-PLH~Aa~~G~~~i~~LLl 593 (1143)
T KOG4177|consen 518 DTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYT-PLHQAAQQGHNDIAELLL 593 (1143)
T ss_pred hhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCC-hhhHHHHcChHHHHHHHH
Confidence 345556778888999999999999999999999999999999999999 999999999999999884
No 46
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.85 E-value=1e-20 Score=105.33 Aligned_cols=79 Identities=29% Similarity=0.352 Sum_probs=72.7
Q ss_pred HHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCC
Q 038923 40 LHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDG 119 (140)
Q Consensus 40 l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~ 119 (140)
||+|++.|+.+++++|++.+.+. +. |.||+|+|+..|+.+++++|++.|++++.++..|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~-----------------~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 59 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADI-----------------NL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNG 59 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTT-----------------TS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTS
T ss_pred CHHHHHcCCHHHHHHHHHCcCCC-----------------CC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCC
Confidence 79999999999999999988764 22 8899999999999999999999999999999999
Q ss_pred CChHHHHHHHcCCHHHHhhhC
Q 038923 120 LTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 120 ~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+| |||+|+.+|+.+++++|+
T Consensus 60 ~t-~L~~A~~~~~~~~~~~Ll 79 (89)
T PF12796_consen 60 NT-ALHYAAENGNLEIVKLLL 79 (89)
T ss_dssp SB-HHHHHHHTTHHHHHHHHH
T ss_pred CC-HHHHHHHcCCHHHHHHHH
Confidence 99 999999999999999984
No 47
>PHA02798 ankyrin-like protein; Provisional
Probab=99.85 E-value=1.1e-20 Score=133.87 Aligned_cols=111 Identities=14% Similarity=0.153 Sum_probs=81.7
Q ss_pred HHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhh-----CcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccc
Q 038923 9 ILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRY-----EHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMN 83 (140)
Q Consensus 9 ~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~-----g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (140)
...++.++++.|++.|.++ +..+..|.||||.|+.. ++.+++++|++.|+++ +.++
T Consensus 46 ~~~~~~~iv~~Ll~~Gadv--n~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gadi-----------------N~~d 106 (489)
T PHA02798 46 RDSPSTDIVKLFINLGANV--NGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADI-----------------NKKN 106 (489)
T ss_pred CCCCCHHHHHHHHHCCCCC--CCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCC-----------------CCCC
Confidence 3345789999999998877 66788899999998753 6789999999999985 5566
Q ss_pred cCCCcHHHHHHHcC---CHHHHHHHHcCCCccccccCCCCChHHHHHHHcCC---HHHHhhh
Q 038923 84 RNKESALYVAYERG---RHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGH---LGTFANL 139 (140)
Q Consensus 84 ~~~~t~l~~A~~~~---~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~---~~~~~~L 139 (140)
..|.||||+|+..+ +.+++++|++.|++++..+..|.| |||+|+..|+ .+++++|
T Consensus 107 ~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~t-pL~~a~~~~~~~~~~vv~~L 167 (489)
T PHA02798 107 SDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFT-MLQVYLQSNHHIDIEIIKLL 167 (489)
T ss_pred CCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCc-HHHHHHHcCCcchHHHHHHH
Confidence 66666666666654 566666666666666666666666 6666666665 6666655
No 48
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.85 E-value=4e-21 Score=131.63 Aligned_cols=135 Identities=21% Similarity=0.176 Sum_probs=115.1
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.|++|.++...+.++|+++++.++.+ +..|..||||||.|+..||..++++|++.|++ ....+.+|..|
T Consensus 74 lTalhq~~id~~~e~v~~l~e~ga~V--n~~d~e~wtPlhaaascg~~~i~~~li~~gA~-~~avNsdg~~P~dl~e~ea 150 (527)
T KOG0505|consen 74 LTALHQACIDDNLEMVKFLVENGANV--NAQDNEGWTPLHAAASCGYLNIVEYLIQHGAN-LLAVNSDGNMPYDLAEDEA 150 (527)
T ss_pred chhHHHHHhcccHHHHHHHHHhcCCc--cccccccCCcchhhcccccHHHHHHHHHhhhh-hhhccCCCCCccccccCcc
Confidence 36899999999999999999998888 66788899999999999999999999999987 56666677666
Q ss_pred -----------------------------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCC
Q 038923 74 -----------------------------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDD 118 (140)
Q Consensus 74 -----------------------------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~ 118 (140)
..+.........|.|.||.|+..|-.++.++|+..|.+++.+|.+
T Consensus 151 ~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~d 230 (527)
T KOG0505|consen 151 TLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYD 230 (527)
T ss_pred hhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccccccc
Confidence 122223344455899999999999999999999999999999999
Q ss_pred CCChHHHHHHHcCCHHHHhhhC
Q 038923 119 GLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 119 ~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
||| |||.|+.=|+.+++++|+
T Consensus 231 gWt-PlHAAA~Wg~~~~~elL~ 251 (527)
T KOG0505|consen 231 GWT-PLHAAAHWGQEDACELLV 251 (527)
T ss_pred CCC-cccHHHHhhhHhHHHHHH
Confidence 999 999999999999998763
No 49
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.84 E-value=3.3e-21 Score=119.61 Aligned_cols=115 Identities=21% Similarity=0.142 Sum_probs=99.1
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccc
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMN 83 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (140)
++..++.+.+++.+..+.+. .. +..|+.|+|||.||+.+|++++|++|++.|+++ ....
T Consensus 132 ~~slsVhql~L~~~~~~~~n--~V--N~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp-----------------~~lg 190 (296)
T KOG0502|consen 132 PLSLSVHQLHLDVVDLLVNN--KV--NACDEFGFTPLIWAAAKGHIPVVQFLLNSGADP-----------------DALG 190 (296)
T ss_pred hhhHHHHHHHHHHHHHHhhc--cc--cCccccCchHhHHHHhcCchHHHHHHHHcCCCh-----------------hhhh
Confidence 45556655555555444433 33 568899999999999999999999999999986 5677
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 84 RNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 84 ~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
....++|.+|+..|..++++.|+.++.+++..|.+|.| ||.+|++.+|..|++.|+
T Consensus 191 k~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgT-pLlyAvrgnhvkcve~Ll 246 (296)
T KOG0502|consen 191 KYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGT-PLLYAVRGNHVKCVESLL 246 (296)
T ss_pred hhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCc-eeeeeecCChHHHHHHHH
Confidence 88899999999999999999999999999999999999 999999999999999885
No 50
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.84 E-value=1.2e-20 Score=121.62 Aligned_cols=105 Identities=19% Similarity=0.251 Sum_probs=82.8
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
+|||+|++.|+...++.|+.++... +..+....||||+|+..||.++|+.|++..+++ |..
T Consensus 36 splhwaakegh~aivemll~rgarv--n~tnmgddtplhlaaahghrdivqkll~~kadv-----------------nav 96 (448)
T KOG0195|consen 36 SPLHWAAKEGHVAIVEMLLSRGARV--NSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADV-----------------NAV 96 (448)
T ss_pred chhhhhhhcccHHHHHHHHhccccc--ccccCCCCcchhhhhhcccHHHHHHHHHHhccc-----------------chh
Confidence 4788888888888888888887776 555666678888888888888888888887776 677
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHH
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVA 127 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A 127 (140)
+..|.||||+||..|.-.+.+-|+..|+.++..+..|.| |+..|
T Consensus 97 nehgntplhyacfwgydqiaedli~~ga~v~icnk~g~t-pldka 140 (448)
T KOG0195|consen 97 NEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMT-PLDKA 140 (448)
T ss_pred hccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCC-chhhh
Confidence 888888888888888888888888888888888878888 77665
No 51
>PHA02741 hypothetical protein; Provisional
Probab=99.83 E-value=6.6e-20 Score=113.33 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=81.5
Q ss_pred cCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCC----HHHHHHHH
Q 038923 31 TVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGR----HDVVKQLL 106 (140)
Q Consensus 31 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~----~~~~~~L~ 106 (140)
..+..|.||||+|++.|+.++++.|+....... .+..++.++..|.||||+|+..|+ .+++++|+
T Consensus 16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~-----------~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll 84 (169)
T PHA02741 16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDC-----------HAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLI 84 (169)
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHHhccch-----------hhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHH
Confidence 456789999999999999999999875421000 011126788899999999999998 58899999
Q ss_pred cCCCccccccC-CCCChHHHHHHHcCCHHHHhhhC
Q 038923 107 NYPSVSLLEMD-DGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 107 ~~~~~~~~~~~-~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..|++++.++. .|.| |||+|+..++.+++++|+
T Consensus 85 ~~gadin~~~~~~g~T-pLh~A~~~~~~~iv~~Ll 118 (169)
T PHA02741 85 ELGADINAQEMLEGDT-ALHLAAHRRDHDLAEWLC 118 (169)
T ss_pred HcCCCCCCCCcCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 99999999885 8999 999999999999999875
No 52
>PHA02792 ankyrin-like protein; Provisional
Probab=99.83 E-value=4.3e-20 Score=131.36 Aligned_cols=133 Identities=12% Similarity=0.005 Sum_probs=114.2
Q ss_pred HHH-HHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHh-hCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 4 RLF-ETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASR-YEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 4 ~l~-~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~-~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
++| .|...|++|.++.|+++|++. +..+..+.+|+|+|+. .++.|++++|++.|++ ....+..|.+|
T Consensus 74 ~~~~~~s~n~~lElvk~LI~~GAdv--N~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad-~~~~~~~g~~~~~~~~~~~ 150 (631)
T PHA02792 74 IFEYLCSDNIDIELLKLLISKGLEI--NSIKNGINIVEKYATTSNPNVDVFKLLLDKGIP-TCSNIQYGYKIIIEQITRA 150 (631)
T ss_pred HHHHHHHhcccHHHHHHHHHcCCCc--ccccCCCCcceeEeecCCCChHHHHHHHHCCCC-cccccccCcchhhhhcccc
Confidence 454 567789999999999999887 5667778999999966 6999999999999998 56777888887
Q ss_pred ------------CchhhhhccccCCCcHHHHHHHcC-------CHHHHHHHHcCCCccccccCCCCChHHHHHHHcC--C
Q 038923 74 ------------TDSWVVHMMNRNKESALYVAYERG-------RHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAG--H 132 (140)
Q Consensus 74 ------------~~~~~~~~~~~~~~t~l~~A~~~~-------~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g--~ 132 (140)
...-.++..+..|.||||+|+..+ ..++++.|+++|++++..+..|.| |||.|+.+. .
T Consensus 151 ~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t-~l~~~~~~~~i~ 229 (631)
T PHA02792 151 EYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHT-TLYYYVDKCDIK 229 (631)
T ss_pred cccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCCh-HHHHHHHcccch
Confidence 111234677888999999999999 899999999999999999999999 999999999 7
Q ss_pred HHHHhhhC
Q 038923 133 LGTFANLV 140 (140)
Q Consensus 133 ~~~~~~Ll 140 (140)
.|++++|+
T Consensus 230 ~ei~~~L~ 237 (631)
T PHA02792 230 REIFDALF 237 (631)
T ss_pred HHHHHHHH
Confidence 89999874
No 53
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.82 E-value=1.9e-20 Score=123.52 Aligned_cols=118 Identities=22% Similarity=0.253 Sum_probs=98.1
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhch-HHHhhcCC--------------------------------------CCCCcHHHH
Q 038923 2 DERLFETILKGDVPNFLNLVHEDE-AIIKQTVP--------------------------------------GSSNTILHL 42 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~--------------------------------------~~g~t~l~~ 42 (140)
+|+||+++..+++++|+.||+.+- +. +..+ ..|.|+|++
T Consensus 269 NTALHYsVSHaNF~VV~~LLDSgvC~V--D~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALML 346 (452)
T KOG0514|consen 269 NTALHYAVSHANFDVVSILLDSGVCDV--DQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALML 346 (452)
T ss_pred CeeeeeeecccchHHHHHHhccCcccc--cccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhh
Confidence 478999999999999999988652 22 2222 346667777
Q ss_pred HHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcC-CCccccccCCCCC
Q 038923 43 ASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNY-PSVSLLEMDDGLT 121 (140)
Q Consensus 43 A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~-~~~~~~~~~~~~t 121 (140)
|+..|+.++++.||..|+++ |.+|.+|.|+|+.||.+||.++++.|+.. +++....|.+|.|
T Consensus 347 AVSHGr~d~vk~LLacgAdV-----------------NiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgST 409 (452)
T KOG0514|consen 347 AVSHGRVDMVKALLACGADV-----------------NIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGST 409 (452)
T ss_pred hhhcCcHHHHHHHHHccCCC-----------------ccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCch
Confidence 77777777777777777776 89999999999999999999999999964 6999999999999
Q ss_pred hHHHHHHHcCCHHHHhhh
Q 038923 122 TSLHVAASAGHLGTFANL 139 (140)
Q Consensus 122 ~~l~~A~~~g~~~~~~~L 139 (140)
+|.+|-..||.||.-+|
T Consensus 410 -Al~IAleagh~eIa~ml 426 (452)
T KOG0514|consen 410 -ALSIALEAGHREIAVML 426 (452)
T ss_pred -hhhhHHhcCchHHHHHH
Confidence 99999999999987654
No 54
>PHA02730 ankyrin-like protein; Provisional
Probab=99.82 E-value=1.6e-19 Score=129.56 Aligned_cols=124 Identities=11% Similarity=0.076 Sum_probs=99.0
Q ss_pred CHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCc----HHHHHHHHhhCCc-ccCCCCCCCCCCC-------------
Q 038923 13 DVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEH----EELALEILKLCPE-MLAAPNDKFETPT------------- 74 (140)
Q Consensus 13 ~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~----~~~~~~Ll~~~~~-~~~~~~~~~~~~~------------- 74 (140)
+++.++.|+++|++. +.. ..|.||||+|+..++ .+++++|+++|++ ..+.+|..|.||.
T Consensus 358 ~ieIvelLIs~GAdI--N~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~ 434 (672)
T PHA02730 358 SIPILRCMLDNGATM--DKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGY 434 (672)
T ss_pred cHHHHHHHHHCCCCC--CcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccc
Confidence 578888888888776 333 578888888877764 7888888888763 3566677777751
Q ss_pred ----------------chhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccC-CCCChHHHHHHHc--CCHHH
Q 038923 75 ----------------DSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMD-DGLTTSLHVAASA--GHLGT 135 (140)
Q Consensus 75 ----------------~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~-~~~t~~l~~A~~~--g~~~~ 135 (140)
.++.++.+|..|.||||+|+..++.+++++|+++|++++..+. .|.| |+|.|+.. ++.++
T Consensus 435 ~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~T-aL~~Aa~~~~~~~eI 513 (672)
T PHA02730 435 HCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINT-AIQKSSYRRENKTKL 513 (672)
T ss_pred cccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcC-HHHHHHHhhcCcHHH
Confidence 1224688899999999999999999999999999999999996 4888 99999884 78999
Q ss_pred HhhhC
Q 038923 136 FANLV 140 (140)
Q Consensus 136 ~~~Ll 140 (140)
++.|+
T Consensus 514 v~~LL 518 (672)
T PHA02730 514 VDLLL 518 (672)
T ss_pred HHHHH
Confidence 98874
No 55
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.82 E-value=1.5e-19 Score=97.85 Aligned_cols=104 Identities=17% Similarity=0.210 Sum_probs=90.4
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
-.+.+++++|.++.|+..+..+-+.. .. ..|.+|||||+-+|+.++++||+..|+++ +.+
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn-~~--~ggR~plhyAAD~GQl~ilefli~iGA~i-----------------~~k 63 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVN-EI--YGGRTPLHYAADYGQLSILEFLISIGANI-----------------QDK 63 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHH-HH--hCCcccchHhhhcchHHHHHHHHHhcccc-----------------CCc
Confidence 45778999999999999998874442 22 47899999999999999999999999986 678
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHH
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVA 127 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A 127 (140)
|..|.|||..|+..||.++|++|++.|++-.....+|.+ .+..+
T Consensus 64 DKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~-~~eat 107 (117)
T KOG4214|consen 64 DKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTA-LIEAT 107 (117)
T ss_pred cccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchh-HHhhc
Confidence 999999999999999999999999999998888877777 55443
No 56
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.81 E-value=2.2e-19 Score=110.67 Aligned_cols=101 Identities=22% Similarity=0.223 Sum_probs=88.1
Q ss_pred CHHHHHHHHcCCHHH---HHHHhhhchHHHhhcCC-CCCCcHHHHHHhhCcHHHHHHHHh-hCCcccCCCCCCCCCCCch
Q 038923 2 DERLFETILKGDVPN---FLNLVHEDEAIIKQTVP-GSSNTILHLASRYEHEELALEILK-LCPEMLAAPNDKFETPTDS 76 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~---~~~ll~~~~~~~~~~~~-~~g~t~l~~A~~~g~~~~~~~Ll~-~~~~~~~~~~~~~~~~~~~ 76 (140)
.|+||+|+..|..+. ++.|++.+..+ +..+ ..|.||||+|+..|+.+++++|+. .+.++
T Consensus 58 ~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadi--n~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~-------------- 121 (166)
T PHA02743 58 RQCTHMVAWYDRANAVMKIELLVNMGADI--NARELGTGNTLLHIAASTKNYELAEWLCRQLGVNL-------------- 121 (166)
T ss_pred CcHHHHHHHhCccCHHHHHHHHHHcCCCC--CCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCc--------------
Confidence 379999999998655 78899988776 5566 589999999999999999999995 68775
Q ss_pred hhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCC
Q 038923 77 WVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLT 121 (140)
Q Consensus 77 ~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t 121 (140)
+.++..|+||||+|+..++.+++++|++.|++++..+..|..
T Consensus 122 ---~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 163 (166)
T PHA02743 122 ---GAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS 163 (166)
T ss_pred ---cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence 678899999999999999999999999999999888876653
No 57
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.81 E-value=6.6e-20 Score=130.15 Aligned_cols=118 Identities=20% Similarity=0.202 Sum_probs=109.8
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
|.||.|+.+|+.+.++.|++..+-+ .+.+..|.+|||+|++.|+.++++.++..+... +..
T Consensus 51 Talhha~Lng~~~is~llle~ea~l--dl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~-----------------na~ 111 (854)
T KOG0507|consen 51 TLLHHAVLNGQNQISKLLLDYEALL--DLCDTKGILPLHLAAWNGNLEIVKMLLLQTDIL-----------------NAV 111 (854)
T ss_pred hHHHHHHhcCchHHHHHHhcchhhh--hhhhccCcceEEehhhcCcchHHHHHHhcccCC-----------------Ccc
Confidence 6899999999999999999987766 456689999999999999999999999999654 778
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+..|.+|||.|+++|+.+++.+|+.+|+++...+..+.| ++..|++.|..++++.|+
T Consensus 112 ~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t-~ldlA~qfgr~~Vvq~ll 168 (854)
T KOG0507|consen 112 NIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKET-VLDLASRFGRAEVVQMLL 168 (854)
T ss_pred cccCcCccchhhhhcchHHHHHHHhcCCCccccCccccc-HHHHHHHhhhhHHHHHHh
Confidence 899999999999999999999999999999999999999 999999999999999874
No 58
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.81 E-value=2.5e-19 Score=107.57 Aligned_cols=111 Identities=16% Similarity=0.147 Sum_probs=97.9
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.||||.|+.+|++++++.|+..++.. ......||||||-||..++.+++.+|+++|+++ +.
T Consensus 98 YTpLHRAaYn~h~div~~ll~~gAn~--~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDV-----------------nA 158 (228)
T KOG0512|consen 98 YTPLHRAAYNGHLDIVHELLLSGANK--EAKTNEGWTPLHSACKWNNFEVAGRLLQHGADV-----------------NA 158 (228)
T ss_pred ccHHHHHHhcCchHHHHHHHHccCCc--ccccccCccchhhhhcccchhHHHHHHhccCcc-----------------cc
Confidence 47999999999999999999999887 667889999999999999999999999999997 77
Q ss_pred cccCCCcHHHHHHHcCC-HHHHHHHH-cCCCccccccCCCCChHHHHHHHcCC
Q 038923 82 MNRNKESALYVAYERGR-HDVVKQLL-NYPSVSLLEMDDGLTTSLHVAASAGH 132 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~-~~~~~~L~-~~~~~~~~~~~~~~t~~l~~A~~~g~ 132 (140)
.....+||||+||...+ ...+.+|+ ..+..+..++..+.| |+.+|-+.+-
T Consensus 159 ~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eet-a~~iARRT~~ 210 (228)
T KOG0512|consen 159 QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEET-AFDIARRTSM 210 (228)
T ss_pred cccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccch-HHHHHHHhhh
Confidence 88888999999997665 55678877 567778888888999 9999988754
No 59
>PHA02917 ankyrin-like protein; Provisional
Probab=99.80 E-value=4.4e-19 Score=128.82 Aligned_cols=116 Identities=10% Similarity=0.039 Sum_probs=80.9
Q ss_pred HHHHHHHHc---CCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHH----HHHHHHhhCCcccCCCCCCCCCCCc
Q 038923 3 ERLFETILK---GDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEE----LALEILKLCPEMLAAPNDKFETPTD 75 (140)
Q Consensus 3 ~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~----~~~~Ll~~~~~~~~~~~~~~~~~~~ 75 (140)
||||.|+.. |+.+.++.|++.+.++ +..+..|+||||+|+.+|+.+ +++.|++.+...
T Consensus 34 t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v--~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~------------- 98 (661)
T PHA02917 34 NALHAYLFNEHCNNVEVVKLLLDSGTNP--LHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYS------------- 98 (661)
T ss_pred cHHHHHHHhhhcCcHHHHHHHHHCCCCc--cccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCC-------------
Confidence 566665444 5566666666666555 345566666666666666633 345555443211
Q ss_pred hhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHH--HcCCHHHHhhhC
Q 038923 76 SWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAA--SAGHLGTFANLV 140 (140)
Q Consensus 76 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~--~~g~~~~~~~Ll 140 (140)
+..+ ..++++.|+..|+.+++++|++.|++++.++..|+| |||.|+ ..|+.+++++|+
T Consensus 99 ----n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T-~L~~~~a~~~~~~eivklLi 158 (661)
T PHA02917 99 ----NIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRS-VIENYVMTDDPVPEIIDLFI 158 (661)
T ss_pred ----CCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCcc-HHHHHHHccCCCHHHHHHHH
Confidence 1111 236678899999999999999999999999999999 999654 578999999985
No 60
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=2.2e-20 Score=120.48 Aligned_cols=116 Identities=20% Similarity=0.185 Sum_probs=98.0
Q ss_pred HHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccC
Q 038923 6 FETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRN 85 (140)
Q Consensus 6 ~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (140)
+-=|+.|+.-.|+.-++..... ++.-|..|++|||+||..||..+++.|++.|+.+ |..+..
T Consensus 5 f~wcregna~qvrlwld~tehd-ln~gddhgfsplhwaakegh~aivemll~rgarv-----------------n~tnmg 66 (448)
T KOG0195|consen 5 FGWCREGNAFQVRLWLDDTEHD-LNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARV-----------------NSTNMG 66 (448)
T ss_pred hhhhhcCCeEEEEEEecCcccc-cccccccCcchhhhhhhcccHHHHHHHHhccccc-----------------ccccCC
Confidence 3345666655555545543332 3567788999999999999999999999999987 788888
Q ss_pred CCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 86 KESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 86 ~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..||||+|+.+|+.++++.|+++.+|++..+..|.| |||+||.-|...+.+-|+
T Consensus 67 ddtplhlaaahghrdivqkll~~kadvnavnehgnt-plhyacfwgydqiaedli 120 (448)
T KOG0195|consen 67 DDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNT-PLHYACFWGYDQIAEDLI 120 (448)
T ss_pred CCcchhhhhhcccHHHHHHHHHHhcccchhhccCCC-chhhhhhhcHHHHHHHHH
Confidence 899999999999999999999999999999999999 999999999988877653
No 61
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.80 E-value=5.7e-19 Score=131.48 Aligned_cols=125 Identities=15% Similarity=0.084 Sum_probs=104.9
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.++++.|++.+.++ +..|..|+||||+|+..|+.+++++|++.++.. + ...+.++
T Consensus 559 ~TpLh~Aa~~g~~~~v~~Ll~~gadi--n~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~-~--~~~~~~~L~~Aa~~g 633 (823)
T PLN03192 559 RTPLHIAASKGYEDCVLVLLKHACNV--HIRDANGNTALWNAISAKHHKIFRILYHFASIS-D--PHAAGDLLCTAAKRN 633 (823)
T ss_pred CCHHHHHHHcChHHHHHHHHhcCCCC--CCcCCCCCCHHHHHHHhCCHHHHHHHHhcCccc-C--cccCchHHHHHHHhC
Confidence 47999999999999999999998877 678899999999999999999999998776542 1 1233344
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCC-CChHHHHHHHcCC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDG-LTTSLHVAASAGH 132 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~-~t~~l~~A~~~g~ 132 (140)
..+..++.+|..|+||||+|+..|+.+++++|++.|++++..+..| .+ |..++.....
T Consensus 634 ~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t-~~~l~~~~~~ 701 (823)
T PLN03192 634 DLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFS-PTELRELLQK 701 (823)
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCC-HHHHHHHHHH
Confidence 3445568899999999999999999999999999999999999888 77 9888765443
No 62
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.80 E-value=6.2e-19 Score=130.29 Aligned_cols=133 Identities=20% Similarity=0.130 Sum_probs=106.7
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHH-HHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILH-LASRYEHEELALEILKLCPEMLAAPNDKFETP------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~-~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~------- 73 (140)
+.+++.|++.|+.+.++.+++..+....+..|..|.|||| .|+..++.++++.|++.+. .+..|.||
T Consensus 18 ~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A~~~ 92 (743)
T TIGR00870 18 EKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAISLE 92 (743)
T ss_pred HHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHHHhc
Confidence 3578999999999999999988433333667889999999 8888999999999999886 45667777
Q ss_pred --------------Cch-----hhhh----ccccCCCcHHHHHHHcCCHHHHHHHHcCCCcccccc--------------
Q 038923 74 --------------TDS-----WVVH----MMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEM-------------- 116 (140)
Q Consensus 74 --------------~~~-----~~~~----~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~-------------- 116 (140)
... ..++ .....|.||||+|+.+|+.++++.|++.|++++.++
T Consensus 93 ~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~ 172 (743)
T TIGR00870 93 YVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSF 172 (743)
T ss_pred cHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcc
Confidence 000 0011 112468999999999999999999999999998653
Q ss_pred CCCCChHHHHHHHcCCHHHHhhhC
Q 038923 117 DDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 117 ~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..|++ |||.|+..|+.+++++|+
T Consensus 173 ~~g~t-pL~~Aa~~~~~~iv~lLl 195 (743)
T TIGR00870 173 YHGES-PLNAAACLGSPSIVALLS 195 (743)
T ss_pred ccccc-HHHHHHHhCCHHHHHHHh
Confidence 24788 999999999999999875
No 63
>PHA02795 ankyrin-like protein; Provisional
Probab=99.79 E-value=8e-19 Score=120.82 Aligned_cols=130 Identities=12% Similarity=-0.077 Sum_probs=105.5
Q ss_pred HHHHcCCHHHHHHHhhhchHHH----hhcCCCCCCcHHHHHHh--hCcHHHHHHHHhhCCcccCCCCCCCCCC-------
Q 038923 7 ETILKGDVPNFLNLVHEDEAII----KQTVPGSSNTILHLASR--YEHEELALEILKLCPEMLAAPNDKFETP------- 73 (140)
Q Consensus 7 ~a~~~g~~~~~~~ll~~~~~~~----~~~~~~~g~t~l~~A~~--~g~~~~~~~Ll~~~~~~~~~~~~~~~~~------- 73 (140)
.|+..+..|.++.|++++..+. .-..+.+++|+||+++. .|+.+++++|+++|+++ +.. ++.||
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADI-n~~--~~~t~lh~A~~~ 159 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVI-YKI--ECLNAYFRGICK 159 (437)
T ss_pred HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCC-CCC--CCCCHHHHHHHc
Confidence 6888999999999999987752 00366779999999999 89999999999999995 443 33556
Q ss_pred ----------Cchh-hhhcc-----ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHh
Q 038923 74 ----------TDSW-VVHMM-----NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFA 137 (140)
Q Consensus 74 ----------~~~~-~~~~~-----~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~ 137 (140)
..+. ..+.. +..+.+++|.|+..++.+++++|+++|++++.++..|.| |||+|+..|+.++++
T Consensus 160 ~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~T-pLh~Aa~~g~~eiVe 238 (437)
T PHA02795 160 KESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRT-LLYRAIYAGYIDLVS 238 (437)
T ss_pred CcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCC-HHHHHHHcCCHHHHH
Confidence 1121 11111 234678999999999999999999999999999999999 999999999999999
Q ss_pred hhC
Q 038923 138 NLV 140 (140)
Q Consensus 138 ~Ll 140 (140)
+|+
T Consensus 239 lLL 241 (437)
T PHA02795 239 WLL 241 (437)
T ss_pred HHH
Confidence 885
No 64
>PHA02730 ankyrin-like protein; Provisional
Probab=99.79 E-value=7.3e-19 Score=126.19 Aligned_cols=121 Identities=12% Similarity=0.055 Sum_probs=100.9
Q ss_pred CHHHHHHHHcC---CHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhC--cHHHHHHHHhhCCcccCCCCCCCCCCCch
Q 038923 2 DERLFETILKG---DVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYE--HEELALEILKLCPEMLAAPNDKFETPTDS 76 (140)
Q Consensus 2 ~~~l~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g--~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 76 (140)
.||||.|+..| +.++++.|+++|+++ +..|..|+||||+|+..+ +.|++++|++.|++..
T Consensus 42 ~TaLh~A~~~~~~~~~eivklLLs~GAdi--n~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~------------- 106 (672)
T PHA02730 42 NNALHCYVSNKCDTDIKIVRLLLSRGVER--LCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNAS------------- 106 (672)
T ss_pred CcHHHHHHHcCCcCcHHHHHHHHhCCCCC--cccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCC-------------
Confidence 47999999997 499999999999888 678899999999999976 7999999999976420
Q ss_pred hhhhccccCCCcHHHHHHH--cCCHHHHHHHHc-CCCccccccC-----CCCChHHHHHHHcCCHHHHhhhC
Q 038923 77 WVVHMMNRNKESALYVAYE--RGRHDVVKQLLN-YPSVSLLEMD-----DGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 77 ~~~~~~~~~~~t~l~~A~~--~~~~~~~~~L~~-~~~~~~~~~~-----~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.+..+..+.+|++.++. .++.+++++|+. .+++++.... .|.+ |+++|...++.|++++|+
T Consensus 107 --~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~-~~yl~~~~~~~eIvklLi 175 (672)
T PHA02730 107 --NELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLV-DIYVTTPNPRPEVLLWLL 175 (672)
T ss_pred --cccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchh-hhhHhcCCCchHHHHHHH
Confidence 03456668899998887 889999999996 6678775532 5777 999999999999999985
No 65
>PHA02792 ankyrin-like protein; Provisional
Probab=99.77 E-value=4.9e-18 Score=121.00 Aligned_cols=106 Identities=10% Similarity=0.113 Sum_probs=92.1
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCC--CCcHHHHHHhhCcH---HHHHHHHhhCCcccCCCCCCCCCCCchhh
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGS--SNTILHLASRYEHE---ELALEILKLCPEMLAAPNDKFETPTDSWV 78 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~--g~t~l~~A~~~g~~---~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 78 (140)
.++.|+..|+.+.++.|++.|++. +..+.. +.||||+|+..+.. +++++|+++|+++
T Consensus 342 ~~~~Aa~~gn~eIVelLIs~GADI--N~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADI---------------- 403 (631)
T PHA02792 342 KYFQKFDNRDPKVVEYILKNGNVV--VEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDI---------------- 403 (631)
T ss_pred HHHHHHHcCCHHHHHHHHHcCCch--hhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcc----------------
Confidence 578889999999999999999887 445544 46999987776654 4688889999886
Q ss_pred hhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHH
Q 038923 79 VHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAAS 129 (140)
Q Consensus 79 ~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~ 129 (140)
+.++..|+||||+|+..++.+++++|++.|++++.++..|.| ||+.|+.
T Consensus 404 -N~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~T-pL~~A~~ 452 (631)
T PHA02792 404 -NKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGST-CIGICVI 452 (631)
T ss_pred -ccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC-HHHHHHH
Confidence 788999999999999999999999999999999999999999 9999976
No 66
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.77 E-value=1e-18 Score=129.20 Aligned_cols=120 Identities=13% Similarity=0.080 Sum_probs=98.9
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhc------------CCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCC
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQT------------VPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKF 70 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~------------~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~ 70 (140)
||||.|+..|+.++++.|++.++++.... ....|.||||+|+..|+.+++++|+++++++
T Consensus 130 TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi-------- 201 (743)
T TIGR00870 130 TALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI-------- 201 (743)
T ss_pred cHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcch--------
Confidence 79999999999999999999987762110 1135899999999999999999999999886
Q ss_pred CCCCchhhhhccccCCCcHHHHHHHcC---------CHHHHHHHHcCCCc---c----ccccCCCCChHHHHHHHcCCHH
Q 038923 71 ETPTDSWVVHMMNRNKESALYVAYERG---------RHDVVKQLLNYPSV---S----LLEMDDGLTTSLHVAASAGHLG 134 (140)
Q Consensus 71 ~~~~~~~~~~~~~~~~~t~l~~A~~~~---------~~~~~~~L~~~~~~---~----~~~~~~~~t~~l~~A~~~g~~~ 134 (140)
+..|..|+||+|+|+..+ ...+.++++..++. . +..|..|.| |||.|+..|+.+
T Consensus 202 ---------n~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~T-PL~~A~~~g~~~ 271 (743)
T TIGR00870 202 ---------LTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLT-PLKLAAKEGRIV 271 (743)
T ss_pred ---------hhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCC-chhhhhhcCCcc
Confidence 788999999999999986 23455666655443 3 567889999 999999999999
Q ss_pred HHhhhC
Q 038923 135 TFANLV 140 (140)
Q Consensus 135 ~~~~Ll 140 (140)
++++|+
T Consensus 272 l~~lLL 277 (743)
T TIGR00870 272 LFRLKL 277 (743)
T ss_pred HHHHHH
Confidence 999874
No 67
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.77 E-value=6.5e-18 Score=108.15 Aligned_cols=118 Identities=23% Similarity=0.219 Sum_probs=108.7
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCc-----HHHHHHHHhhCC--cccCCCCCCCCCCCc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEH-----EELALEILKLCP--EMLAAPNDKFETPTD 75 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~-----~~~~~~Ll~~~~--~~~~~~~~~~~~~~~ 75 (140)
++++.++..++...++.++..+.++ +..+..|.||||+|+..++ .+++++|++.++ ...
T Consensus 75 ~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~------------ 140 (235)
T COG0666 75 LPLHSAASKGDDKIVKLLLASGADV--NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVN------------ 140 (235)
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCc--ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCc------------
Confidence 5789999999999999999998887 6788999999999999999 999999999999 332
Q ss_pred hhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 76 SWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 76 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
+..+..|.||+|+|+..|+.++++.|+..|++++..+..|.| ++++|+..++.++++.+
T Consensus 141 ----~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t-~l~~a~~~~~~~~~~~l 199 (235)
T COG0666 141 ----NLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVT-ALDPAAKNGRIELVKLL 199 (235)
T ss_pred ----cccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCc-chhhhcccchHHHHHHH
Confidence 566899999999999999999999999999999999999999 99999999999988776
No 68
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.76 E-value=2.6e-18 Score=104.78 Aligned_cols=92 Identities=20% Similarity=0.121 Sum_probs=80.6
Q ss_pred HHHHHHHHcCCHH---HHHHHhhhchHHHhhcCC-CCCCcHHHHHHhhCcHHHHHHHHhh-CCcccCCCCCCCCCCCchh
Q 038923 3 ERLFETILKGDVP---NFLNLVHEDEAIIKQTVP-GSSNTILHLASRYEHEELALEILKL-CPEMLAAPNDKFETPTDSW 77 (140)
Q Consensus 3 ~~l~~a~~~g~~~---~~~~ll~~~~~~~~~~~~-~~g~t~l~~A~~~g~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~~ 77 (140)
|+||.|+..|..+ .++.|++.+.+. +..+ ..|.||||+|+..|+.+++++|++. +.++
T Consensus 57 t~Lh~a~~~~~~~~~e~v~~Ll~~gadi--n~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~--------------- 119 (154)
T PHA02736 57 QCVHIVSNPDKADPQEKLKLLMEWGADI--NGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNM--------------- 119 (154)
T ss_pred EEEEeecccCchhHHHHHHHHHHcCCCc--cccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC---------------
Confidence 6899999999874 578899988776 5565 5899999999999999999999984 7765
Q ss_pred hhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccc
Q 038923 78 VVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSL 113 (140)
Q Consensus 78 ~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~ 113 (140)
+..+..|.||||+|+..|+.+++++|++.|++.+
T Consensus 120 --n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 120 --EILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred --ccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 6788999999999999999999999999998764
No 69
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.76 E-value=9.9e-19 Score=124.28 Aligned_cols=133 Identities=21% Similarity=0.127 Sum_probs=111.2
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
.|||+|++.|+.+.++.++.+.... +..+..|.||||.|++.||.+++.+|++++++ +...+.++.++
T Consensus 84 ~plhlaaw~g~~e~vkmll~q~d~~--na~~~e~~tplhlaaqhgh~dvv~~Ll~~~ad-p~i~nns~~t~ldlA~qfgr 160 (854)
T KOG0507|consen 84 LPLHLAAWNGNLEIVKMLLLQTDIL--NAVNIENETPLHLAAQHGHLEVVFYLLKKNAD-PFIRNNSKETVLDLASRFGR 160 (854)
T ss_pred ceEEehhhcCcchHHHHHHhcccCC--CcccccCcCccchhhhhcchHHHHHHHhcCCC-ccccCcccccHHHHHHHhhh
Confidence 4799999999999999999987333 67888999999999999999999999999998 67777778777
Q ss_pred ----------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHh
Q 038923 74 ----------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFA 137 (140)
Q Consensus 74 ----------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~ 137 (140)
........++..+.+|+|+|+.+|+.++++.|+..|.+++... ...| +||.|+..|..++|+
T Consensus 161 ~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t-~~gt-alheaalcgk~evvr 238 (854)
T KOG0507|consen 161 AEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTT-EDGT-ALHEAALCGKAEVVR 238 (854)
T ss_pred hHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCccccc-ccch-hhhhHhhcCcchhhh
Confidence 0000022344567789999999999999999999999988877 5667 999999999999998
Q ss_pred hhC
Q 038923 138 NLV 140 (140)
Q Consensus 138 ~Ll 140 (140)
.|+
T Consensus 239 ~ll 241 (854)
T KOG0507|consen 239 FLL 241 (854)
T ss_pred HHH
Confidence 874
No 70
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.75 E-value=1.4e-17 Score=110.49 Aligned_cols=93 Identities=19% Similarity=0.208 Sum_probs=79.8
Q ss_pred hcCCCCCCc-HHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc----ccCCCcHHHHHHHcCCHHHHHH
Q 038923 30 QTVPGSSNT-ILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM----NRNKESALYVAYERGRHDVVKQ 104 (140)
Q Consensus 30 ~~~~~~g~t-~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~t~l~~A~~~~~~~~~~~ 104 (140)
...|..|+| +||.|+.+|+.+++++|++.|+++ +.+ +..|.||||+|+..|+.+++++
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdi-----------------N~~~~~sd~~g~TpLh~Aa~~~~~eivkl 88 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADP-----------------EAPFPLSENSKTNPLIYAIDCDNDDAAKL 88 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCc-----------------cccCcccCCCCCCHHHHHHHcCCHHHHHH
Confidence 456666665 466677779999999999999985 443 4689999999999999999999
Q ss_pred HHcCCCcccccc-CCCCChHHHHHHHcCCHHHHhhhC
Q 038923 105 LLNYPSVSLLEM-DDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 105 L~~~~~~~~~~~-~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
|+++|++++.++ ..|.| |||.|+..|+.+++++|+
T Consensus 89 LL~~GADVN~~~~~~g~T-pLh~Aa~~~~~eivklLL 124 (300)
T PHA02884 89 LIRYGADVNRYAEEAKIT-PLYISVLHGCLKCLEILL 124 (300)
T ss_pred HHHcCCCcCcccCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 999999999864 47899 999999999999999884
No 71
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.75 E-value=3.2e-17 Score=105.71 Aligned_cols=118 Identities=24% Similarity=0.209 Sum_probs=107.0
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
.+|..++-.|+.+....|++...+. +..|.+|.++|..|+..|+.++++.|++.|+++. ..+
T Consensus 14 ~~Lle~i~Kndt~~a~~LLs~vr~v--n~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN----------------~~q 75 (396)
T KOG1710|consen 14 SPLLEAIDKNDTEAALALLSTVRQV--NQRDPSGMSVLAHAAYKGNLTLVELLLELGADVN----------------DKQ 75 (396)
T ss_pred hHHHHHHccCcHHHHHHHHHHhhhh--hccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcC----------------ccc
Confidence 5799999999999999999985555 6789999999999999999999999999999874 345
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
...+.|||++|+.+|+.++.+.|++.|+.+...+.-|+| +-..|+..|+-++|..+
T Consensus 76 hg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrT-AaqmAAFVG~H~CV~iI 131 (396)
T KOG1710|consen 76 HGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRT-AAQMAAFVGHHECVAII 131 (396)
T ss_pred ccccccHHHHHHHcCCchHHHHHHhccCccccccchhhh-HHHHHHHhcchHHHHHH
Confidence 567899999999999999999999999999999999999 99999999999988754
No 72
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.73 E-value=3.3e-17 Score=119.49 Aligned_cols=104 Identities=17% Similarity=0.162 Sum_probs=92.4
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccc
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMN 83 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (140)
.|+.|+..|+.+.++.|++.+.++ +..|..|.||||+|+..|+.+++++|++.|+++ +.++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadi--n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadv-----------------n~~d 145 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADP--NCRDYDGRTPLHIACANGHVQVVRVLLEFGADP-----------------TLLD 145 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-----------------CCCC
Confidence 588999999999999999998776 667889999999999999999999999999986 6788
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHcC-------CCccccccCCCCChHHHHH
Q 038923 84 RNKESALYVAYERGRHDVVKQLLNY-------PSVSLLEMDDGLTTSLHVA 127 (140)
Q Consensus 84 ~~~~t~l~~A~~~~~~~~~~~L~~~-------~~~~~~~~~~~~t~~l~~A 127 (140)
..|.||||+|+..|+.+++++|+++ |++.+..+..|.+ |+..+
T Consensus 146 ~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~-~~~~~ 195 (664)
T PTZ00322 146 KDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKP-PSLED 195 (664)
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCC-ccchh
Confidence 9999999999999999999999988 7887777777776 65443
No 73
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.73 E-value=1.2e-17 Score=84.34 Aligned_cols=54 Identities=30% Similarity=0.330 Sum_probs=46.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 86 KESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 86 ~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
|.||+|+|+..|+.+++++|++.|.+++.+|.+|.| |||.|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t-~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRT-PLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS---HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHccCHHHHHHHC
Confidence 679999999999999999999999999999999999 999999999999999985
No 74
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.71 E-value=1.8e-16 Score=92.73 Aligned_cols=91 Identities=27% Similarity=0.325 Sum_probs=83.3
Q ss_pred CCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCc
Q 038923 32 VPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSV 111 (140)
Q Consensus 32 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~ 111 (140)
.+..|.||||+|+..++.+++++|++.+... +..+..|.+|+|.|+..++.+++++|++.+..
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~-----------------~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~ 65 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADV-----------------NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD 65 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCC-----------------CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4567999999999999999999999999874 46778899999999999999999999999988
Q ss_pred cccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 112 SLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 112 ~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
++..+..+.| |+|+|+..++.+++++|+
T Consensus 66 ~~~~~~~~~~-~l~~a~~~~~~~~~~~L~ 93 (126)
T cd00204 66 VNARDKDGNT-PLHLAARNGNLDVVKLLL 93 (126)
T ss_pred ccccCCCCCC-HHHHHHHcCcHHHHHHHH
Confidence 8888888999 999999999999999874
No 75
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.71 E-value=6.4e-17 Score=81.64 Aligned_cols=54 Identities=28% Similarity=0.355 Sum_probs=45.3
Q ss_pred CCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHH
Q 038923 36 SNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLL 106 (140)
Q Consensus 36 g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~ 106 (140)
|.||||+|+..|+.+++++|++.+.++ +.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~di-----------------n~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADI-----------------NAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGT-----------------T-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCC-----------------CCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 689999999999999999999999886 678999999999999999999999986
No 76
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=7.6e-17 Score=111.21 Aligned_cols=115 Identities=17% Similarity=0.127 Sum_probs=96.6
Q ss_pred HHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcccc
Q 038923 5 LFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNR 84 (140)
Q Consensus 5 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (140)
|..|+.-|.++.|+..+..-.++ ...+..|-|+||-|+-.||.+||+||++.|+++ |..|.
T Consensus 554 LLDaaLeGEldlVq~~i~ev~Dp--SqpNdEGITaLHNAiCaghyeIVkFLi~~ganV-----------------Na~DS 614 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDP--SQPNDEGITALHNAICAGHYEIVKFLIEFGANV-----------------NAADS 614 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCC--CCCCccchhHHhhhhhcchhHHHHHHHhcCCcc-----------------cCccC
Confidence 56889999999999998876555 557788999999999999999999999999997 88999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHcCCCcccccc-CCCCChHHHHHH--HcCCHHHHhhh
Q 038923 85 NKESALYVAYERGRHDVVKQLLNYPSVSLLEM-DDGLTTSLHVAA--SAGHLGTFANL 139 (140)
Q Consensus 85 ~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~-~~~~t~~l~~A~--~~g~~~~~~~L 139 (140)
+||||||+|+..++..+++.|++.|+.+.... .++.| +....- .-|...|.++|
T Consensus 615 dGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeT-a~eKCee~eeGY~~CsqyL 671 (752)
T KOG0515|consen 615 DGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMET-AAEKCEEMEEGYDQCSQYL 671 (752)
T ss_pred CCCchhhhhhhcCchHHHHHHHhccceEEeeecccccc-hhhhcchhhhhHHHHHHHH
Confidence 99999999999999999999999987765444 46777 776653 35666677765
No 77
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.69 E-value=1e-16 Score=110.33 Aligned_cols=91 Identities=16% Similarity=0.165 Sum_probs=83.7
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccc
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMN 83 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (140)
.+..|++.|+.+.+..|+..+..+ +..+.+|.|+||.||.-.+.+||++|++.++++ +..+
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~~--~~~n~DglTalhq~~id~~~e~v~~l~e~ga~V-----------------n~~d 103 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGASP--NLCNVDGLTALHQACIDDNLEMVKFLVENGANV-----------------NAQD 103 (527)
T ss_pred HHHhccccccHHHHHHHhccCCCc--cccCCccchhHHHHHhcccHHHHHHHHHhcCCc-----------------cccc
Confidence 467899999999999999998777 678899999999999999999999999999997 7889
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHcCCCccc
Q 038923 84 RNKESALYVAYERGRHDVVKQLLNYPSVSL 113 (140)
Q Consensus 84 ~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~ 113 (140)
..+|||+|.|+..|+..++++|+..|+++-
T Consensus 104 ~e~wtPlhaaascg~~~i~~~li~~gA~~~ 133 (527)
T KOG0505|consen 104 NEGWTPLHAAASCGYLNIVEYLIQHGANLL 133 (527)
T ss_pred cccCCcchhhcccccHHHHHHHHHhhhhhh
Confidence 999999999999999999999999887754
No 78
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.66 E-value=5.2e-16 Score=113.31 Aligned_cols=84 Identities=21% Similarity=0.175 Sum_probs=79.7
Q ss_pred HHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCC
Q 038923 39 ILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDD 118 (140)
Q Consensus 39 ~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~ 118 (140)
.|+.|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|++.|++++.++..
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadi-----------------n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~ 147 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADP-----------------NCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKD 147 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-----------------CCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Confidence 488999999999999999999986 678899999999999999999999999999999999999
Q ss_pred CCChHHHHHHHcCCHHHHhhhC
Q 038923 119 GLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 119 ~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
|.| |||+|+..|+.+++++|+
T Consensus 148 G~T-pLh~A~~~g~~~iv~~Ll 168 (664)
T PTZ00322 148 GKT-PLELAEENGFREVVQLLS 168 (664)
T ss_pred CCC-HHHHHHHCCcHHHHHHHH
Confidence 999 999999999999999885
No 79
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.65 E-value=1.7e-16 Score=80.54 Aligned_cols=47 Identities=28% Similarity=0.306 Sum_probs=32.3
Q ss_pred hccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHH
Q 038923 80 HMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVA 127 (140)
Q Consensus 80 ~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A 127 (140)
+.+|..|.||||+|+.+|+.+++++|+..|++++.++..|+| |+|+|
T Consensus 10 n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~T-pl~~A 56 (56)
T PF13857_consen 10 NAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQT-PLHYA 56 (56)
T ss_dssp T---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS---HHHH-
T ss_pred cCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCC-HHHhC
Confidence 788999999999999999999999999999999999999999 99987
No 80
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.65 E-value=1.1e-15 Score=109.68 Aligned_cols=120 Identities=16% Similarity=0.140 Sum_probs=107.2
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhh-------cCC--------------CCCCcHHHHHHhhCcHHHHHHHHhhCCc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQ-------TVP--------------GSSNTILHLASRYEHEELALEILKLCPE 61 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~-------~~~--------------~~g~t~l~~A~~~g~~~~~~~Ll~~~~~ 61 (140)
|+||.|+.+.+.+.|+.|++.++++... ..| ..|..||.+||-.++.|++++|++++++
T Consensus 186 SaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd 265 (782)
T KOG3676|consen 186 SALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGAD 265 (782)
T ss_pred chHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCC
Confidence 6999999999999999999999887222 111 1378899999999999999999999999
Q ss_pred ccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCc--cccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 62 MLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSV--SLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~--~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
+ +.+|..|+|.||..+.+-..++...+++.|++ ....+..|-| ||-+|+.-|..++.+.+
T Consensus 266 ~-----------------~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLT-PLtLAaklGk~emf~~i 327 (782)
T KOG3676|consen 266 P-----------------NAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLT-PLTLAAKLGKKEMFQHI 327 (782)
T ss_pred C-----------------CccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCC-hHHHHHHhhhHHHHHHH
Confidence 7 78999999999999999899999999999999 8889999999 99999999999998876
Q ss_pred C
Q 038923 140 V 140 (140)
Q Consensus 140 l 140 (140)
+
T Consensus 328 l 328 (782)
T KOG3676|consen 328 L 328 (782)
T ss_pred H
Confidence 4
No 81
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.65 E-value=1.1e-15 Score=109.73 Aligned_cols=137 Identities=18% Similarity=0.110 Sum_probs=109.1
Q ss_pred CHHHHHHHH---cCCHHHHHHHhhhchHHHhhcCC---CCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCc
Q 038923 2 DERLFETIL---KGDVPNFLNLVHEDEAIIKQTVP---GSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTD 75 (140)
Q Consensus 2 ~~~l~~a~~---~g~~~~~~~ll~~~~~~~~~~~~---~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 75 (140)
+|.||.|.. .+..+.++.|++-.|..++.... ..|.||||+|+.+.+.++|++|++.|+++..+.....+.|.+
T Consensus 144 ET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~d 223 (782)
T KOG3676|consen 144 ETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDD 223 (782)
T ss_pred hhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCccc
Confidence 467888876 45668899999988887665432 459999999999999999999999999976665566666632
Q ss_pred hhhh-hcc-----ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 76 SWVV-HMM-----NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 76 ~~~~-~~~-----~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
.-.. ... -..|..||.+|+.-++.+++++|+.+|+|++.+|+.|.| .||.-+.+-..+|-.++
T Consensus 224 qk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNT-VLH~lVi~~~~~My~~~ 292 (782)
T KOG3676|consen 224 QKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNT-VLHMLVIHFVTEMYDLA 292 (782)
T ss_pred ccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCCh-HHHHHHHHHHHHHHHHH
Confidence 2110 111 246789999999999999999999999999999999999 99999888666666554
No 82
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.64 E-value=8.7e-16 Score=83.31 Aligned_cols=83 Identities=13% Similarity=0.071 Sum_probs=74.7
Q ss_pred HHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCC
Q 038923 39 ILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDD 118 (140)
Q Consensus 39 ~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~ 118 (140)
-+.|++.+|.++-|+..+..|-++ +. ...|++|||+|+..|+.+++++|++.|++++.+|.+
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nV-----------------n~-~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKy 66 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNV-----------------NE-IYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKY 66 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccH-----------------HH-HhCCcccchHhhhcchHHHHHHHHHhccccCCcccc
Confidence 467889999999999999888664 32 337899999999999999999999999999999999
Q ss_pred CCChHHHHHHHcCCHHHHhhhC
Q 038923 119 GLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 119 ~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
|-| ||.-|++.||..+|++|+
T Consensus 67 gIT-PLLsAvwEGH~~cVklLL 87 (117)
T KOG4214|consen 67 GIT-PLLSAVWEGHRDCVKLLL 87 (117)
T ss_pred CCc-HHHHHHHHhhHHHHHHHH
Confidence 999 999999999999999985
No 83
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.62 E-value=7.2e-16 Score=78.21 Aligned_cols=56 Identities=23% Similarity=0.286 Sum_probs=31.9
Q ss_pred HhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHH
Q 038923 20 LVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVA 93 (140)
Q Consensus 20 ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A 93 (140)
|++.+ ....+..|..|.||||+||.+|+.+++++|++.+.++ +.+|..|+||+|+|
T Consensus 1 LL~~~-~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~-----------------~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHG-PADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADP-----------------NAKDKDGQTPLHYA 56 (56)
T ss_dssp ------T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--T-----------------T---TTS--HHHH-
T ss_pred CCccC-cCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCC-----------------CCCcCCCCCHHHhC
Confidence 45555 2233678899999999999999999999999988886 78999999999987
No 84
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=2.8e-15 Score=103.67 Aligned_cols=83 Identities=27% Similarity=0.228 Sum_probs=77.1
Q ss_pred HHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCC
Q 038923 40 LHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDG 119 (140)
Q Consensus 40 l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~ 119 (140)
|.-|+..|-+++|+.++..-.+. ...+..|.|+||.|+..||.+||++|+.+|++++..|.+|
T Consensus 554 LLDaaLeGEldlVq~~i~ev~Dp-----------------SqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdG 616 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDP-----------------SQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDG 616 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCC-----------------CCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCC
Confidence 34589999999999999998876 5788899999999999999999999999999999999999
Q ss_pred CChHHHHHHHcCCHHHHhhhC
Q 038923 120 LTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 120 ~t~~l~~A~~~g~~~~~~~Ll 140 (140)
|| |||+|+..+++.+++.|+
T Consensus 617 WT-PLHCAASCNnv~~ckqLV 636 (752)
T KOG0515|consen 617 WT-PLHCAASCNNVPMCKQLV 636 (752)
T ss_pred Cc-hhhhhhhcCchHHHHHHH
Confidence 99 999999999999998875
No 85
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.53 E-value=4e-15 Score=110.46 Aligned_cols=137 Identities=18% Similarity=0.157 Sum_probs=103.6
Q ss_pred CCHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-------
Q 038923 1 MDERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP------- 73 (140)
Q Consensus 1 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~------- 73 (140)
++++|-.||+.|+.|.++.|+.++..+ ...|+.|++||.+|+-.||..+|+.|++..+++-...|+.+.|+
T Consensus 757 ~~t~LT~acaggh~e~vellv~rgani--ehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsg 834 (2131)
T KOG4369|consen 757 IKTNLTSACAGGHREEVELLVVRGANI--EHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSG 834 (2131)
T ss_pred ccccccccccCccHHHHHHHHHhcccc--cccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCC
Confidence 367899999999999999999998888 66889999999999999999999999999998766666667766
Q ss_pred ----------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccC--CCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ----------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMD--DGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ----------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~--~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
...+-...++....|||.+|...|..+++..|+..|..++.+.. .|-. ||+.|.++||.+..+.|+
T Consensus 835 gr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgis-PLmlatmngh~~at~~ll 912 (2131)
T KOG4369|consen 835 GRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGIS-PLMLATMNGHQAATLSLL 912 (2131)
T ss_pred CcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcc-hhhhhhhccccHHHHHHh
Confidence 11111123444556777777777777777777777766665543 3555 777777777777666553
No 86
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.49 E-value=6.2e-13 Score=85.03 Aligned_cols=91 Identities=24% Similarity=0.253 Sum_probs=82.9
Q ss_pred CCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCC-----HHHHHHHH
Q 038923 32 VPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGR-----HDVVKQLL 106 (140)
Q Consensus 32 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~-----~~~~~~L~ 106 (140)
.+..+.++++.++..+..+++.+++..+.++ +..+..|.||+|+|+..++ .++++.|+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll 131 (235)
T COG0666 69 RDLDGRLPLHSAASKGDDKIVKLLLASGADV-----------------NAKDADGDTPLHLAALNGNPPEGNIEVAKLLL 131 (235)
T ss_pred CCccccCHHHHHHHcCcHHHHHHHHHcCCCc-----------------ccccCCCCcHHHHHHhcCCcccchHHHHHHHH
Confidence 4455889999999999999999999999986 6889999999999999999 99999999
Q ss_pred cCCC---ccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 107 NYPS---VSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 107 ~~~~---~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.|+ ..+.++..|.| |||+|+..|+.++++.|+
T Consensus 132 ~~g~~~~~~~~~~~~g~t-pl~~A~~~~~~~~~~~ll 167 (235)
T COG0666 132 EAGADLDVNNLRDEDGNT-PLHWAALNGDADIVELLL 167 (235)
T ss_pred HcCCCCCCccccCCCCCc-hhHHHHHcCchHHHHHHH
Confidence 9999 66676889999 999999999999998874
No 87
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.43 E-value=8.5e-14 Score=103.62 Aligned_cols=135 Identities=13% Similarity=0.089 Sum_probs=102.0
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
|+|-.|+..|.-+.+..||...... ..+-+.|.|||+-++..|.+++-++|+..|++....+-..-+-+
T Consensus 928 Taltla~fqgr~evv~lLLa~~anv--ehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kG 1005 (2131)
T KOG4369|consen 928 TALTLALFQGRPEVVFLLLAAQANV--EHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKG 1005 (2131)
T ss_pred cceeeccccCcchHHHHHHHHhhhh--hhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCC
Confidence 4555666666666666666665444 34556778888888888888888888888876433222221111
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
...+-+..++..|+|+|.+|+..|.+..++.|++.+++++..|....+ +++-|.+.||.+||++++
T Consensus 1006 h~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S-~~maafRKgh~~iVk~mv 1080 (2131)
T KOG4369|consen 1006 HTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNS-RTMAAFRKGHFAIVKKMV 1080 (2131)
T ss_pred chhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhccccc-ccHHHHHhchhheecccc
Confidence 223346788899999999999999999999999999999999987888 999999999999999874
No 88
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.36 E-value=5.6e-12 Score=88.54 Aligned_cols=119 Identities=20% Similarity=0.210 Sum_probs=104.4
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
..|..|+..+++-.++.....+... -..+.+..+.||+|+.-|+-++|+|++.+++.- +++..
T Consensus 868 eeil~av~~~D~~klqE~h~~gg~l--l~~~~~~~sllh~a~~tg~~eivkyildh~p~e---------------lld~~ 930 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMKLQETHLNGGSL--LIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSE---------------LLDMA 930 (1004)
T ss_pred HHHHHHHHhccHHHHHHHHhcCCce--EeeCcchhhHHHHHHhcCChHHHHHHHhcCCHH---------------HHHHH
Confidence 4578899999998888887777766 356778899999999999999999999999842 22566
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
+..|.|.||-|+..++..+.++|++.|+.....|..|.| |-..|-+.|..+.+.||
T Consensus 931 de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~t-p~eraqqa~d~dlaayl 986 (1004)
T KOG0782|consen 931 DETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKT-PQERAQQAGDPDLAAYL 986 (1004)
T ss_pred hhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCC-hHHHHHhcCCchHHHHH
Confidence 789999999999999999999999999999999999999 99999999999988776
No 89
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.31 E-value=4.8e-12 Score=92.03 Aligned_cols=96 Identities=16% Similarity=0.150 Sum_probs=84.8
Q ss_pred HHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccc-cCCCcHHHHHH
Q 038923 16 NFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMN-RNKESALYVAY 94 (140)
Q Consensus 16 ~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~l~~A~ 94 (140)
.++.++...++-..++.|..|.|+||+++..|..++++||+++|.++ ..+| ..|+||||.|.
T Consensus 32 qlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv-----------------~vqD~ESG~taLHRai 94 (1267)
T KOG0783|consen 32 QLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDV-----------------FVQDEESGYTALHRAI 94 (1267)
T ss_pred HHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCcee-----------------eeccccccchHhhHhh
Confidence 46777776655556788999999999999999999999999999986 4555 57899999999
Q ss_pred HcCCHHHHHHHHcCCCccccccCCCCChHHHHHHH
Q 038923 95 ERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAAS 129 (140)
Q Consensus 95 ~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~ 129 (140)
.+|+.+++-.|+++|.....+|..|.. ||..-++
T Consensus 95 yyG~idca~lLL~~g~SL~i~Dkegls-plq~~~r 128 (1267)
T KOG0783|consen 95 YYGNIDCASLLLSKGRSLRIKDKEGLS-PLQFLSR 128 (1267)
T ss_pred hhchHHHHHHHHhcCCceEEecccCCC-HHHHHhh
Confidence 999999999999999999999999999 9988766
No 90
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.22 E-value=6.9e-11 Score=76.89 Aligned_cols=88 Identities=19% Similarity=0.173 Sum_probs=78.7
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
++|..|+..|+.+.++.|++.++++. ...+..+.||||+|+..|+.++++.|++.|+.. ...
T Consensus 47 s~LahAaykGnl~~v~lll~~gaDvN-~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~-----------------~~v 108 (396)
T KOG1710|consen 47 SVLAHAAYKGNLTLVELLLELGADVN-DKQHGTLYTPLMFAALSGNQDVCRLLLDAGARM-----------------YLV 108 (396)
T ss_pred cHHHHHHhcCcHHHHHHHHHhCCCcC-cccccccccHHHHHHHcCCchHHHHHHhccCcc-----------------ccc
Confidence 57889999999999999999998873 346688999999999999999999999999986 678
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcC
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNY 108 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~ 108 (140)
|.-|+|+-..|+.-|+.++|..+-++
T Consensus 109 NsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 109 NSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred cchhhhHHHHHHHhcchHHHHHHhcc
Confidence 88999999999999999998887544
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.21 E-value=1.3e-11 Score=84.75 Aligned_cols=88 Identities=20% Similarity=0.186 Sum_probs=78.5
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccc
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMN 83 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (140)
++.+|++.|+++.++.+.-.+.+. ...|.+..|+||+|+..|++++++||++.....+ +.+|
T Consensus 509 ~~~~aa~~GD~~alrRf~l~g~D~--~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~----------------~~kD 570 (622)
T KOG0506|consen 509 NVMYAAKNGDLSALRRFALQGMDL--ETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDP----------------DPKD 570 (622)
T ss_pred hhhhhhhcCCHHHHHHHHHhcccc--cccccccchhheeecccCceeHHHHHHHHHcCCC----------------Chhh
Confidence 578999999999999998888777 6788999999999999999999999999876433 5688
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHcCC
Q 038923 84 RNKESALYVAYERGRHDVVKQLLNYP 109 (140)
Q Consensus 84 ~~~~t~l~~A~~~~~~~~~~~L~~~~ 109 (140)
+.|+|||.-|...+|.+++++|-+..
T Consensus 571 Rw~rtPlDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 571 RWGRTPLDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred ccCCCcchHhHhcCcHHHHHHHHHHh
Confidence 99999999999999999999998653
No 92
>PF13606 Ank_3: Ankyrin repeat
Probab=99.20 E-value=2.8e-11 Score=53.17 Aligned_cols=29 Identities=28% Similarity=0.282 Sum_probs=27.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHcCCCccc
Q 038923 85 NKESALYVAYERGRHDVVKQLLNYPSVSL 113 (140)
Q Consensus 85 ~~~t~l~~A~~~~~~~~~~~L~~~~~~~~ 113 (140)
+|+||||+||..|+.+++++|++.|++++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 48999999999999999999999999886
No 93
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.19 E-value=2.2e-11 Score=83.67 Aligned_cols=88 Identities=20% Similarity=0.092 Sum_probs=80.8
Q ss_pred CCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHc-CCCcc
Q 038923 34 GSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLN-YPSVS 112 (140)
Q Consensus 34 ~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~-~~~~~ 112 (140)
.++...+.+|+..|.+..++.+.-.+.+. +.+|.+.+|.||.|+..|+.+++++|++ .+.++
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~-----------------~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~ 566 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQGMDL-----------------ETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDP 566 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhcccc-----------------cccccccchhheeecccCceeHHHHHHHHHcCCC
Confidence 44567899999999999999998888886 7889999999999999999999999995 57899
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 113 LLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 113 ~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
+.+|.+|+| ||.-|...+|.+++++|
T Consensus 567 ~~kDRw~rt-PlDdA~~F~h~~v~k~L 592 (622)
T KOG0506|consen 567 DPKDRWGRT-PLDDAKHFKHKEVVKLL 592 (622)
T ss_pred ChhhccCCC-cchHhHhcCcHHHHHHH
Confidence 999999999 99999999999999987
No 94
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.18 E-value=1.3e-10 Score=80.39 Aligned_cols=84 Identities=24% Similarity=0.271 Sum_probs=76.1
Q ss_pred HHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccc-cCCCcHHHHHHHcCCHHHHHHHHcCCCccccccC
Q 038923 39 ILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMN-RNKESALYVAYERGRHDVVKQLLNYPSVSLLEMD 117 (140)
Q Consensus 39 ~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~ 117 (140)
-||-+++.|..+.+--|+..|++. |..+ ..|.||||.|++.|+..-++.|.-+|+|+...|.
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~-----------------N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~ 198 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQA-----------------NFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDS 198 (669)
T ss_pred HHHHHhhcccHHHHHHHHHccccc-----------------CCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCC
Confidence 489999999999999999999986 4444 5689999999999999999999999999999999
Q ss_pred CCCChHHHHHHHcCCHHHHhhhC
Q 038923 118 DGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 118 ~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+|.| |+.+|-..||-++.+.|+
T Consensus 199 ~Gmt-P~~~AR~~gH~~laeRl~ 220 (669)
T KOG0818|consen 199 SGMT-PVDYARQGGHHELAERLV 220 (669)
T ss_pred CCCc-HHHHHHhcCchHHHHHHH
Confidence 9999 999999999999887663
No 95
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.15 E-value=2.3e-10 Score=80.47 Aligned_cols=93 Identities=20% Similarity=0.274 Sum_probs=80.4
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHH--HhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAI--IKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~--~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.|..|....|+..+..|+.++... .....+.+|.|+||+||+.|++.+.++|+.+|.++ ..
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv-----------------~~ 689 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDV-----------------MA 689 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccc-----------------ee
Confidence 477888888999999999887543 33455677899999999999999999999999986 67
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccc
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSL 113 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~ 113 (140)
.|..|.|+|.||-+.|..+++..|+.+|+..+
T Consensus 690 rda~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 690 RDAHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred cccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 89999999999999999999999999997644
No 96
>PF13606 Ank_3: Ankyrin repeat
Probab=99.13 E-value=1e-10 Score=51.33 Aligned_cols=28 Identities=29% Similarity=0.347 Sum_probs=26.1
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHhhCCcc
Q 038923 35 SSNTILHLASRYEHEELALEILKLCPEM 62 (140)
Q Consensus 35 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~ 62 (140)
.|+||||+||..|+.+++++|+++|+++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 4899999999999999999999999874
No 97
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.12 E-value=1.3e-10 Score=52.38 Aligned_cols=32 Identities=28% Similarity=0.258 Sum_probs=30.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHcCCCcccccc
Q 038923 85 NKESALYVAYERGRHDVVKQLLNYPSVSLLEM 116 (140)
Q Consensus 85 ~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~ 116 (140)
+|.||||+|+.+|+.+++++|++.|++++.++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 48899999999999999999999999998876
No 98
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.12 E-value=2.7e-10 Score=78.87 Aligned_cols=86 Identities=17% Similarity=0.229 Sum_probs=76.0
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
-.||..++.|+++..-.|+..|++. +-.....|.||||+|+..|+..=+++|+-.|+++ +..
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~-N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~-----------------~a~ 196 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQA-NFFHPEKGNTPLHVAAKAGQILQAELLAVYGADP-----------------GAQ 196 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHccccc-CCCCcccCCchhHHHHhccchhhhhHHhhccCCC-----------------CCC
Confidence 4699999999999999999999887 2234478999999999999999999999999997 789
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHH
Q 038923 83 NRNKESALYVAYERGRHDVVKQLL 106 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~ 106 (140)
|.+|.||+.+|-..||-++.+-|+
T Consensus 197 d~~GmtP~~~AR~~gH~~laeRl~ 220 (669)
T KOG0818|consen 197 DSSGMTPVDYARQGGHHELAERLV 220 (669)
T ss_pred CCCCCcHHHHHHhcCchHHHHHHH
Confidence 999999999999999988766554
No 99
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.07 E-value=3.5e-10 Score=50.89 Aligned_cols=28 Identities=29% Similarity=0.415 Sum_probs=26.3
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHhhCCcc
Q 038923 35 SSNTILHLASRYEHEELALEILKLCPEM 62 (140)
Q Consensus 35 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~ 62 (140)
+|.||||+|+.+|+.+++++|+++|+++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~ 28 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADI 28 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 4899999999999999999999999984
No 100
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.04 E-value=1e-09 Score=77.45 Aligned_cols=89 Identities=11% Similarity=0.095 Sum_probs=81.9
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
+-||+|++.|+-++|+++++++|..+.+..++.|.|+||-|+-.++..++++|++.|+.. ...
T Consensus 901 sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl-----------------~kt 963 (1004)
T KOG0782|consen 901 SLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASL-----------------RKT 963 (1004)
T ss_pred hHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhh-----------------eec
Confidence 358999999999999999999998888888999999999999999999999999999986 567
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcC
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNY 108 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~ 108 (140)
|..|.||-..|-+.|+.++..||-++
T Consensus 964 d~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 964 DSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred ccCCCChHHHHHhcCCchHHHHHhhh
Confidence 88999999999999999999999754
No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.03 E-value=1.1e-09 Score=76.23 Aligned_cols=87 Identities=21% Similarity=0.244 Sum_probs=73.4
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccc
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMN 83 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (140)
++|.+....+.+.+...+...........|..|.||||+|+.-||.+.++.|+..++++ ..+|
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv-----------------~~kN 85 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADV-----------------SIKN 85 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCc-----------------cccc
Confidence 58899999998888876554433333567788999999999999999999999999986 6899
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHc
Q 038923 84 RNKESALYVAYERGRHDVVKQLLN 107 (140)
Q Consensus 84 ~~~~t~l~~A~~~~~~~~~~~L~~ 107 (140)
+.||+|||-|+..|+.+++..++.
T Consensus 86 ~~gWs~L~EAv~~g~~q~i~~vlr 109 (560)
T KOG0522|consen 86 NEGWSPLHEAVSTGNEQIITEVLR 109 (560)
T ss_pred cccccHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999988766664
No 102
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.94 E-value=2.9e-09 Score=74.29 Aligned_cols=85 Identities=18% Similarity=0.176 Sum_probs=69.6
Q ss_pred cHHHHHHhhCcHHHHHHHHhhCC-cccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCcccccc
Q 038923 38 TILHLASRYEHEELALEILKLCP-EMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEM 116 (140)
Q Consensus 38 t~l~~A~~~g~~~~~~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~ 116 (140)
.|+|+++.....+-+...+.... ..+ +..|..|.||||+|+.-|+...++.|+..|+++..++
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~i----------------d~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN 85 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVI----------------DRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKN 85 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhcee----------------ccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccc
Confidence 56999998887655544333322 222 5678889999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHcCCHHHHhhh
Q 038923 117 DDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 117 ~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..|++ |||-|+..|+.+++..+
T Consensus 86 ~~gWs-~L~EAv~~g~~q~i~~v 107 (560)
T KOG0522|consen 86 NEGWS-PLHEAVSTGNEQIITEV 107 (560)
T ss_pred ccccc-HHHHHHHcCCHHHHHHH
Confidence 99999 99999999998776554
No 103
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.86 E-value=9.3e-09 Score=72.63 Aligned_cols=87 Identities=21% Similarity=0.136 Sum_probs=72.7
Q ss_pred HHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCC
Q 038923 40 LHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDG 119 (140)
Q Consensus 40 l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~ 119 (140)
|.-|+...++..+-+|+.+|..... .-...+.+|+|+||+||..|++.+.+.|+.+|.|+...|.+|
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~-------------~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g 694 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEV-------------NETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHG 694 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhh-------------hccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCC
Confidence 4456777778888899999885210 002345677999999999999999999999999999999999
Q ss_pred CChHHHHHHHcCCHHHHhhhC
Q 038923 120 LTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 120 ~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.| +|.+|-+.|.-|++.+|+
T Consensus 695 ~t-~l~yar~a~sqec~d~ll 714 (749)
T KOG0705|consen 695 RT-ALFYARQAGSQECIDVLL 714 (749)
T ss_pred ch-hhhhHhhcccHHHHHHHH
Confidence 99 999999999999999875
No 104
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.78 E-value=2.6e-09 Score=78.30 Aligned_cols=60 Identities=22% Similarity=0.318 Sum_probs=56.3
Q ss_pred hccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccC-CCCChHHHHHHHcCCHHHHhhhC
Q 038923 80 HMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMD-DGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 80 ~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~-~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.+|..|++++|.|+.-+..++++||+.+|.++..+|. .|+| |||.|+.+|+++++-.||
T Consensus 46 nikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~t-aLHRaiyyG~idca~lLL 106 (1267)
T KOG0783|consen 46 NIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYT-ALHRAIYYGNIDCASLLL 106 (1267)
T ss_pred hHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccch-HhhHhhhhchHHHHHHHH
Confidence 68899999999999999999999999999999999997 5888 999999999999988774
No 105
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.72 E-value=3.5e-08 Score=66.75 Aligned_cols=67 Identities=22% Similarity=0.151 Sum_probs=58.0
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP 73 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~ 73 (140)
.|..||+.|+++.|++|++.+-.+ |..|+...+||.+|+..||..++++|+++|+. ..+..-+|...
T Consensus 39 elceacR~GD~d~v~~LVetgvnV--N~vD~fD~spL~lAsLcGHe~vvklLLenGAi-C~rdtf~G~RC 105 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNV--NAVDRFDSSPLYLASLCGHEDVVKLLLENGAI-CSRDTFDGDRC 105 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCc--chhhcccccHHHHHHHcCcHHHHHHHHHcCCc-ccccccCcchh
Confidence 588999999999999999986665 67889999999999999999999999999996 45555566665
No 106
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.70 E-value=7.3e-08 Score=70.79 Aligned_cols=112 Identities=21% Similarity=0.180 Sum_probs=90.6
Q ss_pred HHHHHHHcCCHHHHHHHhhhchH--HHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 4 RLFETILKGDVPNFLNLVHEDEA--IIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~--~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.+..|+..|+...|+..++.... ...+..|.-|.++|+.|..+.+.|+.++|++.....
T Consensus 28 ~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~------------------- 88 (822)
T KOG3609|consen 28 GFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE------------------- 88 (822)
T ss_pred HHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------------------
Confidence 46789999999999999886544 444678888999999999999999999999876531
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccc----------cccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSL----------LEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~----------~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+|..|+..|..++++.++.+..... ..-..+-| |+.+||..++.||++.||
T Consensus 89 -----gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~dit-PliLAAh~NnyEil~~Ll 151 (822)
T KOG3609|consen 89 -----GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDIT-PLMLAAHLNNFEILQCLL 151 (822)
T ss_pred -----chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCcc-HHHHHHHhcchHHHHHHH
Confidence 238999999999999999996543321 22234556 999999999999999985
No 107
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.69 E-value=8.2e-08 Score=64.99 Aligned_cols=68 Identities=25% Similarity=0.218 Sum_probs=59.6
Q ss_pred CcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCcccccc
Q 038923 37 NTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEM 116 (140)
Q Consensus 37 ~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~ 116 (140)
+--|-.||+.|.++.+++|++.|.++ |..|+...+||.+|+.-||.+++++|+++|+..+.-.
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnV-----------------N~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdt 99 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNV-----------------NAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDT 99 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCc-----------------chhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccc
Confidence 44678999999999999999999886 8899999999999999999999999999998766555
Q ss_pred CCCCC
Q 038923 117 DDGLT 121 (140)
Q Consensus 117 ~~~~t 121 (140)
-.|..
T Consensus 100 f~G~R 104 (516)
T KOG0511|consen 100 FDGDR 104 (516)
T ss_pred cCcch
Confidence 45555
No 108
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.66 E-value=3.5e-08 Score=73.40 Aligned_cols=85 Identities=16% Similarity=0.141 Sum_probs=77.6
Q ss_pred CCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccc
Q 038923 34 GSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSL 113 (140)
Q Consensus 34 ~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~ 113 (140)
..|.|+||.|+..|...++++|++.|+++ +..+..|.+|+|.+...|+...+..|+++|++.+
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~v-----------------n~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~ 716 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADV-----------------NALDSKGRTPLHHATASGHTSIACLLLKRGADPN 716 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcc-----------------hhhhccCCCcchhhhhhcccchhhhhcccccccc
Confidence 45789999999999999999999999996 7899999999999999999999999999999999
Q ss_pred cccCCCCChHHHHHHHcCCHHHH
Q 038923 114 LEMDDGLTTSLHVAASAGHLGTF 136 (140)
Q Consensus 114 ~~~~~~~t~~l~~A~~~g~~~~~ 136 (140)
..+..|.+ |+++|....+.+++
T Consensus 717 a~~~~~~~-~l~~a~~~~~~d~~ 738 (785)
T KOG0521|consen 717 AFDPDGKL-PLDIAMEAANADIV 738 (785)
T ss_pred ccCccCcc-hhhHHhhhccccHH
Confidence 99999999 99999776555444
No 109
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.51 E-value=8e-08 Score=71.89 Aligned_cols=108 Identities=21% Similarity=0.207 Sum_probs=74.3
Q ss_pred cCCCCCCcHHHHHHhhCcHHHHHHHHhh-CC-cccCCCCCCCCCC---------------CchhhhhccccCCCcHHHHH
Q 038923 31 TVPGSSNTILHLASRYEHEELALEILKL-CP-EMLAAPNDKFETP---------------TDSWVVHMMNRNKESALYVA 93 (140)
Q Consensus 31 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~-~~-~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~t~l~~A 93 (140)
.....|++.+|+++..++.-.++.+++. +. ......+..|..+ .++.-++.+|..||||||+|
T Consensus 569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wA 648 (975)
T KOG0520|consen 569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWA 648 (975)
T ss_pred cCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchH
Confidence 3445567777777777776666666664 22 2223333344333 23344578999999999999
Q ss_pred HHcCCHHHHHHHHcCCCccc------cccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 94 YERGRHDVVKQLLNYPSVSL------LEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 94 ~~~~~~~~~~~L~~~~~~~~------~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
+.+|+..++..|+..|++.. .....|.| +-..|..+|+..+.-+|
T Consensus 649 a~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~t-a~~la~s~g~~gia~~l 699 (975)
T KOG0520|consen 649 AFRGREKLVASLIELGADPGAVTDPSPETPGGKT-AADLARANGHKGIAGYL 699 (975)
T ss_pred hhcCHHHHHHHHHHhccccccccCCCCCCCCCCc-hhhhhhcccccchHHHH
Confidence 99999999999997776543 33445778 89999999988776554
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.41 E-value=7.1e-07 Score=55.17 Aligned_cols=60 Identities=18% Similarity=0.186 Sum_probs=56.4
Q ss_pred hhccccCCCcHHHHHHHcCCHHHHHHHHcCC-CccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 79 VHMMNRNKESALYVAYERGRHDVVKQLLNYP-SVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 79 ~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~-~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
++..|..|||+++.|+.-|..+.+.||+.+| +.+...+..+.+ ++.+|-+.|..+.++.|
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssld-aaqlaek~g~~~fvh~l 65 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLD-AAQLAEKGGAQAFVHSL 65 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccch-HHHHHHhcChHHHHHHH
Confidence 4788999999999999999999999999999 999999999999 99999999999998876
No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.29 E-value=2.1e-06 Score=53.17 Aligned_cols=65 Identities=15% Similarity=0.044 Sum_probs=57.3
Q ss_pred hcCCCCCCcHHHHHHhhCcHHHHHHHHhhC-CcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcC
Q 038923 30 QTVPGSSNTILHLASRYEHEELALEILKLC-PEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNY 108 (140)
Q Consensus 30 ~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~ 108 (140)
+..|..|||+++.|+..|..+.+.||+.+| +.+ ...+.++.+...+|-..|..+++..|.+.
T Consensus 6 n~rD~fgWTalmcaa~eg~~eavsyllgrg~a~v-----------------gv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 6 NARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFV-----------------GVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred cchhhhcchHHHHHhhhcchhHHHHHhccCcccc-----------------cccccccchHHHHHHhcChHHHHHHHHHH
Confidence 567889999999999999999999999999 554 67888999999999999999999999865
Q ss_pred CCc
Q 038923 109 PSV 111 (140)
Q Consensus 109 ~~~ 111 (140)
-.+
T Consensus 69 ~~e 71 (223)
T KOG2384|consen 69 DRE 71 (223)
T ss_pred hcc
Confidence 443
No 112
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.25 E-value=1.1e-06 Score=66.07 Aligned_cols=57 Identities=18% Similarity=0.099 Sum_probs=40.3
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHH-cCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 81 MMNRNKESALYVAYERGRHDVVKQLL-NYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 81 ~~~~~~~t~l~~A~~~~~~~~~~~L~-~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..+..+...+|+ |..++.+..-+|+ -.|..++..|..|+| |||||+.+|+..++..|
T Consensus 603 eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~t-pL~wAa~~G~e~l~a~l 660 (975)
T KOG0520|consen 603 ELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWT-PLHWAAFRGREKLVASL 660 (975)
T ss_pred hhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCc-ccchHhhcCHHHHHHHH
Confidence 344555566666 4444444443333 456778899999999 99999999999988765
No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.13 E-value=2.7e-06 Score=63.71 Aligned_cols=84 Identities=21% Similarity=0.253 Sum_probs=73.7
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
++||.|+..|..-.++.|++.+.+. +..+..|.+|+|.+...|+...+..+++++++. +..
T Consensus 658 s~lh~a~~~~~~~~~e~ll~~ga~v--n~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~-----------------~a~ 718 (785)
T KOG0521|consen 658 SLLHVAVGTGDSGAVELLLQNGADV--NALDSKGRTPLHHATASGHTSIACLLLKRGADP-----------------NAF 718 (785)
T ss_pred chhhhhhccchHHHHHHHHhcCCcc--hhhhccCCCcchhhhhhcccchhhhhccccccc-----------------ccc
Confidence 5799999999999999999999886 778999999999999999999999999999985 678
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHH
Q 038923 83 NRNKESALYVAYERGRHDVVKQL 105 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L 105 (140)
+..+.+|+.+|....+.+++-.+
T Consensus 719 ~~~~~~~l~~a~~~~~~d~~~l~ 741 (785)
T KOG0521|consen 719 DPDGKLPLDIAMEAANADIVLLL 741 (785)
T ss_pred CccCcchhhHHhhhccccHHHHH
Confidence 88999999999766666554443
No 114
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.00 E-value=3.8e-05 Score=57.09 Aligned_cols=97 Identities=12% Similarity=-0.018 Sum_probs=71.3
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
++++.|+.+.+.+..+.|++..-.. ..+|.+|+..|.+++++.++.+..... .....+..+ ...
T Consensus 64 ~al~iai~nenle~~eLLl~~~~~~---------gdALL~aI~~~~v~~VE~ll~~~~~~~-~~~~~~d~~------~~~ 127 (822)
T KOG3609|consen 64 LALHIAIDNENLELQELLLDTSSEE---------GDALLLAIAVGSVPLVELLLVHFVDAP-YLERSGDAN------SPH 127 (822)
T ss_pred hceecccccccHHHHHHHhcCcccc---------chHHHHHHHHHHHHHHHHHHhcccccc-hhccccccC------ccc
Confidence 3678899999999999988873221 347889999999999999999877521 111111111 223
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccc
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLE 115 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~ 115 (140)
...+.||+.+||..++.+|++.|++.|+.+..-
T Consensus 128 ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 128 FTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP 160 (822)
T ss_pred CCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence 456779999999999999999999999876533
No 115
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.86 E-value=2.5e-05 Score=54.94 Aligned_cols=45 Identities=20% Similarity=0.139 Sum_probs=41.2
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHH
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAA 128 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~ 128 (140)
+....|+||+|+..|..+++.+|++.|+|+..+|..|.| |..++.
T Consensus 427 ~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grt-py~ls~ 471 (591)
T KOG2505|consen 427 DYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRT-PYSLSA 471 (591)
T ss_pred ccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCC-cccccc
Confidence 344679999999999999999999999999999999999 998876
No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.77 E-value=6.2e-05 Score=31.48 Aligned_cols=27 Identities=33% Similarity=0.345 Sum_probs=23.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHcCCCcc
Q 038923 86 KESALYVAYERGRHDVVKQLLNYPSVS 112 (140)
Q Consensus 86 ~~t~l~~A~~~~~~~~~~~L~~~~~~~ 112 (140)
+.+|+|+|+..++.++++.|++.+.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 678999999999999999999887765
No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.75 E-value=7e-05 Score=31.30 Aligned_cols=27 Identities=26% Similarity=0.273 Sum_probs=24.0
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHhhCCc
Q 038923 35 SSNTILHLASRYEHEELALEILKLCPE 61 (140)
Q Consensus 35 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~ 61 (140)
.|.||+|+|+..++.++++.|++.+.+
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 378999999999999999999998775
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.94 E-value=0.00081 Score=47.72 Aligned_cols=43 Identities=12% Similarity=0.049 Sum_probs=36.7
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHH
Q 038923 35 SSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAY 94 (140)
Q Consensus 35 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~ 94 (140)
...|+||+|+..|..+++.++|+.+.++ ..+|..|.||..++.
T Consensus 429 ltsT~LH~aa~qg~~k~v~~~Leeg~Dp-----------------~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 429 LTSTFLHYAAAQGARKCVKYFLEEGCDP-----------------STKDGAGRTPYSLSA 471 (591)
T ss_pred ccchHHHHHHhcchHHHHHHHHHhcCCc-----------------hhcccCCCCcccccc
Confidence 3579999999999999999999999885 567777888877776
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.41 E-value=0.052 Score=35.22 Aligned_cols=112 Identities=15% Similarity=0.108 Sum_probs=66.4
Q ss_pred HHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcccc
Q 038923 5 LFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNR 84 (140)
Q Consensus 5 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (140)
|..|+..-+.+.+..++... ..-.+++.++...+..+++.+|+.+...- ++|. ....
T Consensus 157 ledAV~AsN~~~i~~~VtdK---------kdA~~Am~~si~~~K~dva~~lls~f~ft--~~dv------------~~~~ 213 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTDK---------KDAHQAMWLSIGNAKEDVALYLLSKFNFT--KQDV------------ASME 213 (284)
T ss_pred HHHHHhhcCHHHHHHHhcch---------HHHHHHHHHHhcccHHHHHHHHHhhccee--cchh------------hhcC
Confidence 44555555555555444431 12346788888888899999999887631 1111 0111
Q ss_pred CCCcHHHHHHH--cCCHHHHHHHHcCC-Cccccc---cCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 85 NKESALYVAYE--RGRHDVVKQLLNYP-SVSLLE---MDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 85 ~~~t~l~~A~~--~~~~~~~~~L~~~~-~~~~~~---~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.+.--+.++.. .-...++++++++| .+++.. ..+|.| .|.-|..+++.|++..||
T Consensus 214 ~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdt-MLDNA~Ky~~~emi~~Ll 274 (284)
T PF06128_consen 214 KELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDT-MLDNAMKYKNSEMIAFLL 274 (284)
T ss_pred cchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcch-HHHhHHhcCcHHHHHHHH
Confidence 11112333322 23566788888777 555433 336888 888888888888887764
No 120
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=96.35 E-value=0.026 Score=35.29 Aligned_cols=122 Identities=15% Similarity=0.131 Sum_probs=77.1
Q ss_pred HHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-----------
Q 038923 5 LFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP----------- 73 (140)
Q Consensus 5 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~----------- 73 (140)
+..|++.+-+++++..-+.-.. . -...++.+-.||+..+.++|.|+-+.-.. .+ ...-...+
T Consensus 50 l~HAVk~nmL~ILqkyke~L~~---~--~~~~q~LFElAC~~qkydiV~WI~qnL~i-~~-~~~iFdIA~~~kDlsLysl 122 (192)
T PF03158_consen 50 LYHAVKYNMLSILQKYKEDLEN---E--RYLNQELFELACEEQKYDIVKWIGQNLHI-YN-PEDIFDIAFAKKDLSLYSL 122 (192)
T ss_pred HHHHHHcCcHHHHHHHHHHhhc---c--hhHHHHHHHHHHHHccccHHHHHhhccCC-CC-chhhhhhhhhccchhHHHH
Confidence 5678888888887776443111 1 12456778899999999999999554331 11 11111111
Q ss_pred CchhhhhccccC-C-------CcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 TDSWVVHMMNRN-K-------ESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ~~~~~~~~~~~~-~-------~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
......+..... + ..-|..|+..|-...+-..+++|.+++. + .|..|+.++|..++.+++
T Consensus 123 GY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~-vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 123 GYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------I-VLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------H-HHHHHHHhhHHHHHHHhh
Confidence 111111111111 1 1346789999999999888899887643 5 999999999999988764
No 121
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.11 E-value=0.067 Score=34.75 Aligned_cols=94 Identities=10% Similarity=0.005 Sum_probs=63.7
Q ss_pred HHHHHHHcCCHHHHHHHhhhchH---HHhhcCCCCCCcHHHHHHh--hCcHHHHHHHHhhCCcccCCCCCCCCCCCchhh
Q 038923 4 RLFETILKGDVPNFLNLVHEDEA---IIKQTVPGSSNTILHLASR--YEHEELALEILKLCPEMLAAPNDKFETPTDSWV 78 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~---~~~~~~~~~g~t~l~~A~~--~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 78 (140)
++..++..+..+++-+|++.-.- ..... ..+.--+-|+.. ..+..++++.+++|-..++.+
T Consensus 182 Am~~si~~~K~dva~~lls~f~ft~~dv~~~--~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~------------ 247 (284)
T PF06128_consen 182 AMWLSIGNAKEDVALYLLSKFNFTKQDVASM--EKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKK------------ 247 (284)
T ss_pred HHHHHhcccHHHHHHHHHhhcceecchhhhc--CcchhhHHHHHhhcCCcHHHHHHHHhccccccchh------------
Confidence 56777877888888888876321 11111 223334445433 345788999999886323222
Q ss_pred hhccccCCCcHHHHHHHcCCHHHHHHHHcCCCcc
Q 038923 79 VHMMNRNKESALYVAYERGRHDVVKQLLNYPSVS 112 (140)
Q Consensus 79 ~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~ 112 (140)
-.+-++|.|-|.-|..+++.+++..|+++|+..
T Consensus 248 -F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 248 -FQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred -hhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 234578999999999999999999999999853
No 122
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=95.72 E-value=0.038 Score=29.47 Aligned_cols=48 Identities=17% Similarity=0.147 Sum_probs=39.3
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhC
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLC 59 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~ 59 (140)
..+..|+.+|+.|.++.+++.. .+ + ...+..|+...+-++++||+++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~-----~---~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KP-----D---NDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-cc-----H---HHHHHHHHHHhhHHHHHHHHHhc
Confidence 4688999999999999988653 22 1 34689999999999999999975
No 123
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=94.77 E-value=0.05 Score=29.00 Aligned_cols=45 Identities=16% Similarity=0.105 Sum_probs=33.1
Q ss_pred cHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 88 SALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 88 t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..|...|+.++++..++.+. + ... ++..|+...+-+++++|+
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~-~------~~~-~l~~AI~~H~n~i~~~l~ 52 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNK-P------DND-CLEYAIKSHNNEIADWLI 52 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhc-c------HHH-HHHHHHHHhhHHHHHHHH
Confidence 45778888899999888875442 1 133 788888888888888763
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=87.94 E-value=2.7 Score=26.63 Aligned_cols=73 Identities=14% Similarity=0.077 Sum_probs=47.1
Q ss_pred CcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCcccccc
Q 038923 37 NTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEM 116 (140)
Q Consensus 37 ~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~ 116 (140)
+..+..|+.++...+++..-+..... -...++.+..||...+.++|+|.-..-...
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~~~--------------------~~~~q~LFElAC~~qkydiV~WI~qnL~i~---- 102 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLENE--------------------RYLNQELFELACEEQKYDIVKWIGQNLHIY---- 102 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhhcc--------------------hhHHHHHHHHHHHHccccHHHHHhhccCCC----
Confidence 45567788988899888876654431 123457788999999999999994322211
Q ss_pred CCCCChHHHHHHHcCCHHH
Q 038923 117 DDGLTTSLHVAASAGHLGT 135 (140)
Q Consensus 117 ~~~~t~~l~~A~~~g~~~~ 135 (140)
+-.+ -+.+|....+.++
T Consensus 103 -~~~~-iFdIA~~~kDlsL 119 (192)
T PF03158_consen 103 -NPED-IFDIAFAKKDLSL 119 (192)
T ss_pred -Cchh-hhhhhhhccchhH
Confidence 2222 5566666655544
No 125
>PF08898 DUF1843: Domain of unknown function (DUF1843); InterPro: IPR014994 This domain is found in functionally uncharacterised proteins. It can be found independently or at the C terminus of the protein.
Probab=80.12 E-value=3.6 Score=20.25 Aligned_cols=24 Identities=21% Similarity=0.339 Sum_probs=20.9
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHH
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAI 27 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~ 27 (140)
+++.|+..||+..++.|.......
T Consensus 6 aiq~AiasGDLa~MK~l~~~aeq~ 29 (53)
T PF08898_consen 6 AIQQAIASGDLAQMKALAAQAEQQ 29 (53)
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHH
Confidence 689999999999999998876554
No 126
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=62.04 E-value=21 Score=18.42 Aligned_cols=25 Identities=16% Similarity=0.295 Sum_probs=20.3
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHH
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAII 28 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~ 28 (140)
++..+|..|+.+.+..+++......
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~y~~yI 26 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKHYEPYI 26 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4667899999999999999865553
No 127
>PF05476 PET122: PET122; InterPro: IPR008732 The nuclear PET122 gene of Saccharomyces cerevisiae encodes a mitochondrial-localised protein that activates initiation of translation of the mitochondrial mRNA from the COX3 gene, which encodes subunit III of cytochrome c oxidase [].; GO: 0003743 translation initiation factor activity, 0006413 translational initiation, 0005740 mitochondrial envelope
Probab=57.88 E-value=13 Score=24.91 Aligned_cols=53 Identities=13% Similarity=0.031 Sum_probs=30.6
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhh
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKL 58 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~ 58 (140)
.+..-|.+|+++.+-..+...|.. ...-..-.+-|--+|+.||++.+.++.-+
T Consensus 16 ~l~~~CLNr~Fd~vL~~~R~~p~~--emd~~fLq~yL~~S~qwgHv~Si~yIW~k 68 (267)
T PF05476_consen 16 RLYLQCLNREFDDVLAELRQIPVD--EMDYSFLQLYLARSCQWGHVPSIDYIWYK 68 (267)
T ss_pred HHHHHHhhhhHHHHHHHHHcCcHh--HhhHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 356667777777766666654433 11111223445557888887777776654
No 128
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=47.75 E-value=15 Score=27.17 Aligned_cols=44 Identities=9% Similarity=0.055 Sum_probs=29.8
Q ss_pred hccccCCCcHHHHHHHcCCHHHHHHHHcC-CCccccccCCCCChHH
Q 038923 80 HMMNRNKESALYVAYERGRHDVVKQLLNY-PSVSLLEMDDGLTTSL 124 (140)
Q Consensus 80 ~~~~~~~~t~l~~A~~~~~~~~~~~L~~~-~~~~~~~~~~~~t~~l 124 (140)
+.....++++++++...++.+.+.....+ ..+-+.....+++ +.
T Consensus 171 ~~l~gq~sp~lll~~~s~h~~~v~~d~~~~~~~rn~~~~~~re-~~ 215 (558)
T KOG4335|consen 171 NYLLGQQSPELLLRFTSAHDDDVAMDEPFLQFRRNVFFPKGRE-LQ 215 (558)
T ss_pred chhhccCCchhhhhccCCchhhhhccccchHHhhhhhcccCcc-hh
Confidence 45677888899988888888887766533 2444455556666 54
No 129
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=45.20 E-value=38 Score=22.07 Aligned_cols=55 Identities=22% Similarity=0.308 Sum_probs=37.9
Q ss_pred hcCCCCCCcHHHHHHhhCcHHHH-HHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcC
Q 038923 30 QTVPGSSNTILHLASRYEHEELA-LEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERG 97 (140)
Q Consensus 30 ~~~~~~g~t~l~~A~~~g~~~~~-~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~ 97 (140)
...+.....|||-|+.-++.+++ -|+++..+.++ ...|..|.+|-.+|.+|..+.
T Consensus 216 klId~kTe~~LHk~iki~REDVl~LYfie~dakiP-------------~~LNd~D~nG~~ALdiAL~~~ 271 (280)
T KOG4591|consen 216 KLIDGKTENPLHKAIKIEREDVLFLYFIEMDAKIP-------------GILNDADHNGALALDIALCRE 271 (280)
T ss_pred HHHcCCCcchhHHhhhccccceeeehhhhcccccc-------------ccccccCCCchHHHHHHHHHH
Confidence 45566677899999998888774 45666555432 223567888888888886543
No 130
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=44.26 E-value=62 Score=23.81 Aligned_cols=101 Identities=18% Similarity=0.141 Sum_probs=55.8
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccc
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMN 83 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (140)
-+-.|...|+++....+........ .....--.|...|+.++++..+++..+. .
T Consensus 324 rFeLAl~lg~L~~A~~~a~~~~~~~------~W~~Lg~~AL~~g~~~lAe~c~~k~~d~-----------------~--- 377 (443)
T PF04053_consen 324 RFELALQLGNLDIALEIAKELDDPE------KWKQLGDEALRQGNIELAEECYQKAKDF-----------------S--- 377 (443)
T ss_dssp HHHHHHHCT-HHHHHHHCCCCSTHH------HHHHHHHHHHHTTBHHHHHHHHHHCT-H-----------------H---
T ss_pred HhHHHHhcCCHHHHHHHHHhcCcHH------HHHHHHHHHHHcCCHHHHHHHHHhhcCc-----------------c---
Confidence 4567788888888777665533221 1112234677788999988888887763 1
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHH-HHhhh
Q 038923 84 RNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLG-TFANL 139 (140)
Q Consensus 84 ~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~-~~~~L 139 (140)
..+.+....|+.+-++.|.+.-. ...+... +++.+...|+.+ +++.|
T Consensus 378 ----~L~lLy~~~g~~~~L~kl~~~a~----~~~~~n~-af~~~~~lgd~~~cv~lL 425 (443)
T PF04053_consen 378 ----GLLLLYSSTGDREKLSKLAKIAE----ERGDINI-AFQAALLLGDVEECVDLL 425 (443)
T ss_dssp ----HHHHHHHHCT-HHHHHHHHHHHH----HTT-HHH-HHHHHHHHT-HHHHHHHH
T ss_pred ----ccHHHHHHhCCHHHHHHHHHHHH----HccCHHH-HHHHHHHcCCHHHHHHHH
Confidence 35566777777777766653200 1111122 566666666643 55544
No 131
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=36.43 E-value=8.7 Score=28.96 Aligned_cols=52 Identities=10% Similarity=-0.003 Sum_probs=35.3
Q ss_pred HHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCC
Q 038923 18 LNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFET 72 (140)
Q Consensus 18 ~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~ 72 (140)
-.|++.+... +..+..+.+|+|+++..|..++.+.++...-. .......+..
T Consensus 413 ~~lik~~~~~--~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~-~~~~~~~~~~ 464 (605)
T KOG3836|consen 413 FTLIKKGAHP--NDDDKFGFTPLHIPQISGDPRIIQLLLNCKVA-ISLKSVNGMI 464 (605)
T ss_pred eeeecccCcc--chhcccccccccccCCCCCHHHhhhhhhhhhh-hhcccccccc
Confidence 3344444444 55778999999999999999999988876554 3333333333
No 132
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=29.31 E-value=8.4 Score=28.51 Aligned_cols=26 Identities=12% Similarity=-0.065 Sum_probs=22.3
Q ss_pred CCcHHHHHHhhCcHHHHHHHHhhCCc
Q 038923 36 SNTILHLASRYEHEELALEILKLCPE 61 (140)
Q Consensus 36 g~t~l~~A~~~g~~~~~~~Ll~~~~~ 61 (140)
-.|++.+|+.+|.++++.+++..+.+
T Consensus 58 qR~~~~v~~~~Gs~~~~~~i~~~~~~ 83 (528)
T KOG1595|consen 58 QRRRRPVARRDGSFNYSPDIYCTKYD 83 (528)
T ss_pred cccccchhhhcCccccccceeecchh
Confidence 46999999999999999998876654
No 133
>PF04840 Vps16_C: Vps16, C-terminal region; InterPro: IPR006925 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=28.61 E-value=84 Score=21.98 Aligned_cols=48 Identities=23% Similarity=0.300 Sum_probs=33.1
Q ss_pred HHHHHcCCHHHHHHHHcCCCccccc------cCCCCChHHHHHHHcCCHHHHhhh
Q 038923 91 YVAYERGRHDVVKQLLNYPSVSLLE------MDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 91 ~~A~~~~~~~~~~~L~~~~~~~~~~------~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..|...|+.+....|+++-.....+ -..... +|..|+..|+.+.+-.+
T Consensus 8 ~~A~~~GR~~LA~~LL~~Ep~~~~qVplLL~m~e~e~-AL~kAi~SgD~DLi~~v 61 (319)
T PF04840_consen 8 RKAYEEGRPKLATKLLELEPRASKQVPLLLKMGEDEL-ALNKAIESGDTDLIYLV 61 (319)
T ss_pred HHHHHcChHHHHHHHHHcCCChHHHHHHHhcCCchHH-HHHHHHHcCCccHHHHH
Confidence 4577888888888888665443322 224455 89999999998876543
No 134
>TIGR02957 SigX4 RNA polymerase sigma-70 factor, TIGR02957 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building and bidirectional best hits, to represent a conserved family. This family is found in a limited number of bacterial lineages. This family includes apparent paralogous expansion in Streptomyces coelicolor A3(2), and multiple copies in Mycobacterium smegmatis MC2, Streptomyces avermitilis MA-4680 and Nocardia farcinica IFM10152.
Probab=28.50 E-value=53 Score=22.23 Aligned_cols=52 Identities=25% Similarity=0.356 Sum_probs=33.5
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhh
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKL 58 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~ 58 (140)
.+..|+..||++.+..|+...... ..|..|..|--.....|...+..++...
T Consensus 172 ~f~~a~~~gD~~~l~~lL~~dv~~---~~dggg~~~~~~~p~~G~~~v~~~~~~~ 223 (281)
T TIGR02957 172 RFVEAAQTGDLDGLLELLAEDVVL---YGDGGGKVRAALRPIYGADRVARFFFGL 223 (281)
T ss_pred HHHHHHHhCCHHHHHHHHhhceEE---EecCCCcCCCCCcccccHHHHHHHHHHH
Confidence 567888999999999998875433 2333444332233456777777777553
No 135
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=24.92 E-value=15 Score=27.80 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=26.1
Q ss_pred hccccCCCcHHHHHHHcCCHHHHHHHHcCCCc
Q 038923 80 HMMNRNKESALYVAYERGRHDVVKQLLNYPSV 111 (140)
Q Consensus 80 ~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~ 111 (140)
+..+..+.+|+|+++..|..++++.+....-+
T Consensus 423 ~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~ 454 (605)
T KOG3836|consen 423 NDDDKFGFTPLHIPQISGDPRIIQLLLNCKVA 454 (605)
T ss_pred chhcccccccccccCCCCCHHHhhhhhhhhhh
Confidence 56788899999999999999998888754433
No 136
>PF04405 ScdA_N: Domain of Unknown function (DUF542) ; InterPro: IPR007500 This is a domain of unknown function found at the N terminus of genes involved in cell wall development and nitrous oxide protection. ScdA is required for normal cell growth and development; mutants have an increased level of peptidoglycan cross-linking and aberrant cellular morphology suggesting a role for ScdA in cell wall metabolism []. NorA1, NorA2, and YtfE are involved in the nitrous oxide response. NorA1 and NorA2, which are similar to YtfE, are co-transcribed with the membrane-bound nitrous oxide (NO) reductases. The genes appear to be involved in NO protection but their function is unknown [, ].
Probab=21.57 E-value=1.3e+02 Score=15.01 Aligned_cols=34 Identities=18% Similarity=0.080 Sum_probs=22.1
Q ss_pred CHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHH
Q 038923 98 RHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGT 135 (140)
Q Consensus 98 ~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~ 135 (140)
++...+.|-++|.|. ...|.. +|..|+....++.
T Consensus 12 ~p~~a~vf~~~gIDf---CCgG~~-~L~eA~~~~~ld~ 45 (56)
T PF04405_consen 12 DPRAARVFRKYGIDF---CCGGNR-SLEEACEEKGLDP 45 (56)
T ss_pred ChHHHHHHHHcCCcc---cCCCCc-hHHHHHHHcCCCH
Confidence 445566666777663 336777 8888887666543
No 137
>cd04445 DEP_PLEK1 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in pleckstrin 1-like proteins. Pleckstrin 1 plays a role in cell spreading and reorganization of actin cytoskeleton in platelets and leukocytes. Its activity is highly regulated by phosphorylation, mainly by protein kinase C. Pleckstrin-like proteins contain a central DEP domain, flanked by 2 PH (pleckstrin homology) domains.
Probab=20.80 E-value=98 Score=17.56 Aligned_cols=10 Identities=20% Similarity=0.208 Sum_probs=6.1
Q ss_pred HHHHHHHcCC
Q 038923 100 DVVKQLLNYP 109 (140)
Q Consensus 100 ~~~~~L~~~~ 109 (140)
++|+||++..
T Consensus 36 dVVdWLv~~~ 45 (99)
T cd04445 36 CVIDWLVSNQ 45 (99)
T ss_pred HHHHHHHHhh
Confidence 5667776543
Done!