Query 038923
Match_columns 140
No_of_seqs 125 out of 2457
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 07:11:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038923.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038923hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 5.4E-34 1.8E-38 175.4 13.0 134 3-140 6-156 (169)
2 2jab_A H10-2-G3; HER2, darpin, 100.0 3.6E-31 1.2E-35 157.4 12.8 119 2-140 15-133 (136)
3 3v31_A Ankyrin repeat family A 100.0 4.3E-31 1.5E-35 161.8 12.0 135 2-140 4-155 (167)
4 3v30_A DNA-binding protein rfx 100.0 1.1E-30 3.9E-35 160.6 13.3 135 3-140 4-155 (172)
5 2y1l_E Darpin-8.4; hydrolase-i 100.0 9.6E-31 3.3E-35 160.7 12.9 134 3-140 16-166 (169)
6 1awc_B Protein (GA binding pro 100.0 2E-30 6.9E-35 156.9 13.9 133 2-139 3-152 (153)
7 1d9s_A Cyclin-dependent kinase 100.0 2.9E-31 9.8E-36 157.8 9.7 118 2-140 13-131 (136)
8 2rfm_A Putative ankyrin repeat 100.0 6.8E-31 2.3E-35 164.2 11.4 135 2-140 36-187 (192)
9 1ihb_A P18-INK4C(INK6), cyclin 100.0 8.8E-31 3E-35 159.6 9.8 134 2-140 6-157 (162)
10 1yyh_A HN1;, notch 1, ankyrin 100.0 5E-30 1.7E-34 166.5 12.6 136 2-140 58-210 (253)
11 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1.3E-29 4.3E-34 148.3 12.7 119 2-140 3-121 (126)
12 2f8y_A Notch homolog 1, transl 100.0 1.3E-29 4.3E-34 161.5 12.8 135 2-139 26-177 (223)
13 1bi7_B P16INK4A, MTS1, multipl 100.0 2.7E-30 9.1E-35 156.9 9.2 118 2-140 13-131 (156)
14 3hra_A Ankyrin repeat family p 100.0 1.6E-29 5.5E-34 158.8 12.9 136 2-140 40-198 (201)
15 1oy3_D Transcription factor in 100.0 2.4E-29 8.2E-34 164.9 13.8 137 2-140 10-212 (282)
16 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.2E-29 7.5E-34 152.6 11.4 134 2-140 3-153 (156)
17 3aji_A 26S proteasome non-ATPa 100.0 2.6E-29 8.8E-34 160.8 12.3 132 4-139 43-191 (231)
18 3aaa_C Myotrophin, protein V-1 100.0 9.6E-30 3.3E-34 148.8 9.0 115 2-136 8-122 (123)
19 2dzn_A Probable 26S proteasome 100.0 1E-28 3.5E-33 157.7 14.1 136 2-139 3-159 (228)
20 2dzn_A Probable 26S proteasome 100.0 5.2E-29 1.8E-33 159.1 12.7 137 2-140 37-194 (228)
21 2rfa_A Transient receptor pote 100.0 3.7E-29 1.3E-33 160.3 12.0 135 2-139 4-177 (232)
22 1s70_B 130 kDa myosin-binding 100.0 5.1E-29 1.7E-33 164.8 12.6 134 3-140 75-252 (299)
23 3twr_A Tankyrase-2; ankyrin re 100.0 5.5E-29 1.9E-33 152.1 11.8 134 2-139 9-159 (165)
24 2rfa_A Transient receptor pote 100.0 1.4E-28 4.8E-33 157.6 13.3 137 2-140 38-217 (232)
25 1oy3_D Transcription factor in 100.0 3.7E-29 1.3E-33 164.0 10.6 136 2-140 46-245 (282)
26 2xai_A ASB-9, ankyrin repeat a 100.0 9.1E-29 3.1E-33 161.3 12.1 133 2-139 4-153 (261)
27 3twr_A Tankyrase-2; ankyrin re 100.0 3.1E-29 1.1E-33 153.3 9.2 105 2-110 43-164 (165)
28 1yyh_A HN1;, notch 1, ankyrin 100.0 7.9E-29 2.7E-33 160.9 11.5 134 2-139 91-242 (253)
29 3c5r_A BARD-1, BRCA1-associate 100.0 1.2E-29 4.2E-34 150.8 6.9 118 2-139 11-128 (137)
30 4g8k_A 2-5A-dependent ribonucl 100.0 1.7E-28 5.8E-33 165.0 13.2 134 3-140 27-188 (337)
31 3b7b_A Euchromatic histone-lys 100.0 2.2E-28 7.4E-33 157.1 13.1 133 3-139 13-163 (237)
32 4b93_B Ankyrin repeat domain-c 100.0 7E-29 2.4E-33 162.7 10.9 117 3-139 88-204 (269)
33 3utm_A Tankyrase-1; tankyrase, 100.0 1.5E-28 5E-33 165.4 12.7 61 79-140 240-300 (351)
34 2f8y_A Notch homolog 1, transl 100.0 1.9E-28 6.5E-33 156.0 12.4 136 2-140 59-211 (223)
35 3f6q_A Integrin-linked protein 100.0 1.8E-28 6.2E-33 151.7 11.9 119 2-139 6-124 (179)
36 3aji_A 26S proteasome non-ATPa 100.0 3.2E-28 1.1E-32 155.7 13.3 136 2-140 7-159 (231)
37 1k1a_A B-cell lymphoma 3-encod 100.0 2.8E-28 9.6E-33 156.7 12.6 133 3-139 11-202 (241)
38 3b7b_A Euchromatic histone-lys 100.0 3.1E-28 1E-32 156.4 12.7 136 2-140 45-197 (237)
39 4hbd_A KN motif and ankyrin re 100.0 1.3E-28 4.4E-33 161.9 11.1 134 3-140 113-270 (276)
40 3hra_A Ankyrin repeat family p 100.0 2E-28 7E-33 153.7 11.3 135 2-140 6-165 (201)
41 1ikn_D Protein (I-kappa-B-alph 100.0 3E-29 1E-33 161.2 7.6 134 3-139 47-203 (236)
42 3d9h_A CDNA FLJ77766, highly s 100.0 2.3E-28 8E-33 161.3 11.7 132 3-139 61-209 (285)
43 2vge_A RELA-associated inhibit 100.0 7.6E-29 2.6E-33 159.1 9.0 118 3-140 23-143 (229)
44 1k1a_A B-cell lymphoma 3-encod 100.0 7.4E-28 2.5E-32 154.8 13.1 109 30-140 3-136 (241)
45 3jxi_A Vanilloid receptor-rela 100.0 1.6E-28 5.5E-33 159.7 9.9 119 2-140 94-245 (260)
46 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.5E-28 5E-33 158.6 9.6 118 3-140 39-159 (239)
47 2etb_A Transient receptor pote 100.0 1.9E-28 6.5E-33 159.1 10.1 119 2-140 91-241 (256)
48 4hbd_A KN motif and ankyrin re 100.0 2E-28 6.8E-33 161.0 9.9 137 3-140 78-236 (276)
49 3f6q_A Integrin-linked protein 100.0 1.3E-28 4.3E-33 152.4 8.3 119 2-140 40-158 (179)
50 2xai_A ASB-9, ankyrin repeat a 100.0 5.3E-28 1.8E-32 157.7 11.5 133 2-140 37-186 (261)
51 1ikn_D Protein (I-kappa-B-alph 100.0 3.1E-29 1.1E-33 161.1 5.4 137 2-140 9-171 (236)
52 3ehr_A Osteoclast-stimulating 100.0 1.1E-28 3.6E-33 157.5 7.8 119 2-140 74-193 (222)
53 3ljn_A Hypothetical protein; a 100.0 6.5E-28 2.2E-32 163.6 11.8 124 2-140 139-264 (364)
54 3deo_A Signal recognition part 100.0 8.4E-28 2.9E-32 149.3 11.2 109 2-131 45-154 (183)
55 3eu9_A Huntingtin-interacting 100.0 1.2E-27 3.9E-32 153.5 11.5 134 3-140 78-230 (240)
56 2pnn_A Transient receptor pote 100.0 5.3E-28 1.8E-32 158.4 9.7 119 2-140 102-253 (273)
57 1dcq_A PYK2-associated protein 100.0 2.4E-27 8.2E-32 156.0 12.8 120 3-140 132-258 (278)
58 3ui2_A Signal recognition part 100.0 8.7E-28 3E-32 155.4 10.3 117 2-139 46-179 (244)
59 3d9h_A CDNA FLJ77766, highly s 99.9 2.4E-27 8.3E-32 156.4 12.3 133 2-140 93-242 (285)
60 1n11_A Ankyrin; clathrin, BAND 99.9 1.7E-27 5.9E-32 164.9 11.9 132 4-139 215-363 (437)
61 4b93_B Ankyrin repeat domain-c 99.9 2.6E-28 8.9E-33 159.9 6.9 118 2-139 120-238 (269)
62 3kea_A K1L; tropism, ANK repea 99.9 1.8E-27 6E-32 157.1 10.7 132 2-140 32-181 (285)
63 1wdy_A 2-5A-dependent ribonucl 99.9 6.3E-27 2.1E-31 153.3 13.1 135 2-140 6-168 (285)
64 3t8k_A Uncharacterized protein 99.9 6.5E-28 2.2E-32 150.3 7.9 132 3-139 8-173 (186)
65 3ljn_A Hypothetical protein; a 99.9 2.4E-27 8.3E-32 160.8 11.1 132 3-140 22-193 (364)
66 3kea_A K1L; tropism, ANK repea 99.9 2.8E-28 9.7E-33 160.9 6.3 133 2-140 63-215 (285)
67 1n11_A Ankyrin; clathrin, BAND 99.9 7E-27 2.4E-31 161.8 13.5 134 2-139 246-396 (437)
68 2b0o_E UPLC1; arfgap, structur 99.9 4.8E-27 1.6E-31 156.1 12.0 118 3-140 153-279 (301)
69 2etb_A Transient receptor pote 99.9 4.3E-27 1.5E-31 152.8 11.4 134 2-140 44-201 (256)
70 3lvq_E ARF-GAP with SH3 domain 99.9 4.5E-27 1.5E-31 165.5 12.1 118 3-140 134-260 (497)
71 1wdy_A 2-5A-dependent ribonucl 99.9 1.1E-26 3.6E-31 152.2 12.6 135 2-140 106-273 (285)
72 2fo1_E LIN-12 protein; beta-ba 99.9 1.1E-26 3.7E-31 158.4 13.0 137 3-140 201-366 (373)
73 3jue_A Arfgap with coiled-coil 99.9 8.9E-27 3E-31 158.4 11.9 118 3-140 201-321 (368)
74 2pnn_A Transient receptor pote 99.9 1.6E-26 5.4E-31 151.4 12.7 135 2-140 55-213 (273)
75 4g8k_A 2-5A-dependent ribonucl 99.9 1.8E-26 6.2E-31 155.1 12.5 137 2-140 126-293 (337)
76 3utm_A Tankyrase-1; tankyrase, 99.9 2E-26 6.7E-31 155.0 12.5 119 3-140 26-144 (351)
77 3jxi_A Vanilloid receptor-rela 99.9 6.1E-27 2.1E-31 152.3 9.5 135 2-140 47-205 (260)
78 1s70_B 130 kDa myosin-binding 99.9 5.2E-27 1.8E-31 155.2 9.1 117 3-139 42-158 (299)
79 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.8E-26 6.3E-31 128.7 9.8 88 35-140 1-88 (93)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.4E-27 1.1E-31 152.2 7.6 118 2-140 6-123 (239)
81 2fo1_E LIN-12 protein; beta-ba 99.9 8.1E-27 2.8E-31 159.0 9.8 135 2-140 167-333 (373)
82 3eu9_A Huntingtin-interacting 99.9 5.7E-26 1.9E-30 145.6 10.6 123 3-128 11-150 (240)
83 1sw6_A Regulatory protein SWI6 99.9 3.8E-26 1.3E-30 153.3 7.3 131 6-140 102-303 (327)
84 4gpm_A Engineered protein OR26 99.9 2.4E-25 8.3E-30 136.7 10.1 111 2-115 38-165 (169)
85 1n0q_A 3ANK, 3 ankyrin repeats 99.9 6.7E-25 2.3E-29 122.3 10.2 91 2-111 3-93 (93)
86 2aja_A Ankyrin repeat family p 99.9 2.6E-26 8.9E-31 156.5 3.1 122 3-140 94-219 (376)
87 2l6b_A NR1C; ankyrin, consensu 99.9 7E-25 2.4E-29 126.6 7.6 102 2-123 10-111 (115)
88 2rfm_A Putative ankyrin repeat 99.9 1.8E-24 6E-29 135.1 9.1 111 28-140 27-154 (192)
89 3t8k_A Uncharacterized protein 99.9 8.4E-26 2.9E-30 140.8 2.8 103 35-139 5-139 (186)
90 1sw6_A Regulatory protein SWI6 99.9 3.2E-25 1.1E-29 148.8 5.1 127 2-131 132-327 (327)
91 3c5r_A BARD-1, BRCA1-associate 99.9 5.7E-24 2E-28 126.2 9.9 92 31-140 5-96 (137)
92 2zgd_A 3 repeat synthetic anky 99.9 5.7E-24 2E-28 122.0 9.1 91 31-139 19-109 (110)
93 2l6b_A NR1C; ankyrin, consensu 99.9 4.7E-24 1.6E-28 123.1 7.6 92 31-140 4-95 (115)
94 3aaa_C Myotrophin, protein V-1 99.9 1.5E-23 5E-28 122.4 9.3 90 33-140 4-93 (123)
95 3v30_A DNA-binding protein rfx 99.9 8.5E-24 2.9E-28 129.8 7.6 118 2-123 37-171 (172)
96 1d9s_A Cyclin-dependent kinase 99.9 8.1E-24 2.8E-28 125.5 6.7 92 30-140 6-98 (136)
97 2vge_A RELA-associated inhibit 99.9 1.4E-23 4.9E-28 134.5 8.0 106 17-140 1-107 (229)
98 2b0o_E UPLC1; arfgap, structur 99.9 7E-24 2.4E-28 140.9 6.4 105 3-133 192-299 (301)
99 3v31_A Ankyrin repeat family A 99.9 3.4E-23 1.2E-27 126.6 8.6 104 35-140 2-122 (167)
100 1bi7_B P16INK4A, MTS1, multipl 99.9 1.4E-23 4.8E-28 127.1 6.0 104 2-126 46-150 (156)
101 2jab_A H10-2-G3; HER2, darpin, 99.9 4.4E-23 1.5E-27 122.3 7.8 91 32-140 10-100 (136)
102 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.1E-22 3.8E-27 124.6 8.5 107 32-140 10-133 (169)
103 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.1E-22 1.1E-26 116.7 10.0 88 35-140 1-88 (126)
104 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.1E-22 3.9E-27 123.6 8.3 104 35-140 4-123 (162)
105 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.3E-22 4.4E-27 122.6 8.5 104 36-140 2-121 (156)
106 2aja_A Ankyrin repeat family p 99.9 1.7E-24 5.9E-29 147.5 -0.1 112 3-140 130-245 (376)
107 1awc_B Protein (GA binding pro 99.9 3.2E-22 1.1E-26 120.7 9.2 102 36-140 2-120 (153)
108 3ehr_A Osteoclast-stimulating 99.9 3.2E-22 1.1E-26 127.4 8.2 91 32-140 69-160 (222)
109 3deo_A Signal recognition part 99.9 7.7E-22 2.6E-26 122.4 7.7 88 34-140 42-130 (183)
110 2zgd_A 3 repeat synthetic anky 99.9 7E-21 2.4E-25 109.0 9.9 85 2-105 25-109 (110)
111 3ui2_A Signal recognition part 99.9 1.4E-21 4.8E-26 126.3 7.3 88 34-140 43-131 (244)
112 3lvq_E ARF-GAP with SH3 domain 99.8 5.8E-21 2E-25 134.5 9.5 95 2-115 172-269 (497)
113 1dcq_A PYK2-associated protein 99.8 6.4E-21 2.2E-25 125.4 8.8 91 2-111 170-263 (278)
114 3jue_A Arfgap with coiled-coil 99.8 1E-19 3.6E-24 123.7 8.7 110 2-131 236-348 (368)
115 1gp8_A Protein (scaffolding pr 78.7 0.88 3E-05 20.0 1.1 17 4-20 16-32 (40)
116 3zrh_A Ubiquitin thioesterase 70.5 14 0.00049 25.8 5.7 52 8-59 29-92 (454)
117 3zrh_A Ubiquitin thioesterase 38.1 86 0.0029 22.1 5.2 45 94-139 30-88 (454)
118 3mkq_B Coatomer subunit alpha; 37.1 70 0.0024 19.4 5.2 53 3-62 10-63 (177)
119 3t5x_A PCI domain-containing p 20.8 1.1E+02 0.0038 18.8 3.3 25 3-27 84-108 (203)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.4e-34 Score=175.37 Aligned_cols=134 Identities=22% Similarity=0.273 Sum_probs=124.4
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
++|+.|++.|+.++|+.|++.+.++ +..+..|+||||+|+..++.+++++|++.|++ ++.+|.+|.||
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv--n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV--NASDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHHHHHHHcCC
Confidence 5799999999999999999998887 77889999999999999999999999999998 68899999999
Q ss_pred --------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 --------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 --------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++.++..|+||||+|+..|+.+++++|++.|++++.++..|+| |||+|+..|+.+++++|+
T Consensus 83 ~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~T-pL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRT-PLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 344557888999999999999999999999999999999999999999 999999999999999884
No 2
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.97 E-value=3.6e-31 Score=157.40 Aligned_cols=119 Identities=18% Similarity=0.135 Sum_probs=112.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.++||.|++.|+.+.++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.++++ +.
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------~~ 75 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADV--NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-----------------NA 75 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-----------------TC
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------Cc
Confidence 37899999999999999999998776 667889999999999999999999999999986 67
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 76 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-pl~~A~~~~~~~~~~~Ll 133 (136)
T 2jab_A 76 VDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKT-AFDISIGNGNEDLAEILQ 133 (136)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCC-HHHHHHHCCCHHHHHHHH
Confidence 8889999999999999999999999999999999999999 999999999999999884
No 3
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=4.3e-31 Score=161.82 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=121.7
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
+||||.|+..|+.+.++.|++.+... +..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENVI--NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRESALSLACSKG 80 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHT
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCCc--CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcC
Confidence 57899999999999999999997665 66888999999999999999999999999987 67888899998
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++..+..|.| |+++|+..|+.+++++|+
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-~l~~A~~~~~~~~~~~L~ 155 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYN-SMDLAVALGYRSVQQVIE 155 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-HHHHHHHcCcHHHHHHHH
Confidence 233446778889999999999999999999999999999999999999 999999999999999874
No 4
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.1e-30 Score=160.60 Aligned_cols=135 Identities=15% Similarity=0.145 Sum_probs=121.9
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
+|||.|+..|+.+.++.|++.++... +..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLV-NKPDERGFTPLIWASAFGEIETVRFLLEWGAD-PHILAKERESALSLASTGGY 81 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGG-GCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTC
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccc-cCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCCHHHHHHHCCC
Confidence 68999999999999999999987643 56788999999999999999999999999998 67888899998
Q ss_pred --------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 --------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 --------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYT-PMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC-HHHHHHHhCcHHHHHHHH
Confidence 344556778889999999999999999999999999999999999999 999999999999999874
No 5
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=9.6e-31 Score=160.68 Aligned_cols=134 Identities=21% Similarity=0.177 Sum_probs=120.8
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
++|+.|++.|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||
T Consensus 16 ~~l~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 92 (169)
T 2y1l_E 16 KKLLEAARAGRDDEVRILMANGADV--NAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPLRLAALFGH 92 (169)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCC
Confidence 6899999999999999999998776 66788999999999999999999999999988 67888899998
Q ss_pred --------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 --------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 --------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++.++..|.| |+++|+..|+.+++++|+
T Consensus 93 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-~l~~A~~~~~~~~~~~L~ 166 (169)
T 2y1l_E 93 LEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKT-AFDISIDNGNEDLAEILQ 166 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-HHHHHHHhCCHHHHHHHH
Confidence 233445777889999999999999999999999999999999999999 999999999999999874
No 6
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2e-30 Score=156.87 Aligned_cols=133 Identities=20% Similarity=0.177 Sum_probs=119.2
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.++|+.|++.|+.+.++.|++.+... + .+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~--~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPF--T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCC--C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHT
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCC--C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcC
Confidence 47899999999999999999987654 2 577899999999999999999999999988 67888889998
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..+..++.++..|.||||+|+..|+.+++++|++.|++++.++..|.| |+|+|+..|+.+++++|
T Consensus 79 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 79 HANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT-AFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC-HHHHHHHcCCHHHHHHh
Confidence 344556788899999999999999999999999999999999999999 99999999999999987
No 7
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=2.9e-31 Score=157.81 Aligned_cols=118 Identities=14% Similarity=0.058 Sum_probs=111.1
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.+|||.|++.|+.++++.|++.+.++ +..+..|.||||+|+. |+.+++++|++.+.++ +.
T Consensus 13 ~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-----------------~~ 72 (136)
T 1d9s_A 13 DAGLATAAARGQVETVRQLLEAGADP--NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-----------------NC 72 (136)
T ss_dssp SCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-----------------SC
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCc--CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-----------------CC
Confidence 47999999999999999999998776 6788999999999999 9999999999999986 67
Q ss_pred cccC-CCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 82 MNRN-KESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 82 ~~~~-~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
++.. |+||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..|+.+++++|+
T Consensus 73 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t-pl~~A~~~~~~~~~~~Ll 131 (136)
T 1d9s_A 73 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRL-PVDLAEEQGHRDIARYLH 131 (136)
T ss_dssp CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSC-HHHHHHHHTCHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 8888 999999999999999999999999999999999999 999999999999999884
No 8
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=6.8e-31 Score=164.25 Aligned_cols=135 Identities=21% Similarity=0.155 Sum_probs=121.5
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 112 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDKL--EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFSGKTPLMWSIIFG 112 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcccc--ccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcC
Confidence 47899999999999999999987765 66788899999999999999999999999988 67888899999
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++.++..|.||||+|+..|+.+++++|++.|++++.++..|.| |+++|+..|+.+++++|+
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 113 YSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLT-AEASARIFGRQEVIKIFT 187 (192)
T ss_dssp CHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCB-HHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC-HHHHHHHhCcHHHHHHHH
Confidence 234446778889999999999999999999999999999999999999 999999999999999874
No 9
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=8.8e-31 Score=159.57 Aligned_cols=134 Identities=16% Similarity=0.128 Sum_probs=119.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.++|+.|++.|+.+.++.|++.+.++ +..+..|.||||+|+. |+.+++++|++.+.+ ++.++..|.||
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNV--NAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCT--TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHT
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCc--cccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcC
Confidence 57999999999999999999988776 6678899999999999 999999999999988 67888899998
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCc-cccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSV-SLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~-~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++.++..|.||||+|+..|+.+++++|++.|++ ++..+..|.| |||+|+..|+.+++++|+
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t-~l~~A~~~~~~~~~~~Ll 157 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT-ACDLARLYGRNEVVSLMQ 157 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCc-HHHHHHHcCCHHHHHHHH
Confidence 23445677888999999999999999999999999887 5888888999 999999999999999874
No 10
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=5e-30 Score=166.52 Aligned_cols=136 Identities=18% Similarity=0.089 Sum_probs=105.8
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+....+..+..|.||
T Consensus 58 ~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 135 (253)
T 1yyh_A 58 ETALHLAARYSRSDAAKRLLEASADA--NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 135 (253)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC
Confidence 36899999999999999999887776 66778889999999999999999999988875577888888888
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++..+..|+||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..|+.+++++|+
T Consensus 136 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-pL~~A~~~~~~~~v~~Ll 210 (253)
T 1yyh_A 136 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREET-PLFLAAREGSYETAKVLL 210 (253)
T ss_dssp CSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHH
T ss_pred hHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-HHHHHHHCCCHHHHHHHH
Confidence 223334566667777777777777777777777777777777777777 777777777777777663
No 11
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.97 E-value=1.3e-29 Score=148.28 Aligned_cols=119 Identities=26% Similarity=0.314 Sum_probs=111.7
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.|+||.|++.|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.++ +.
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-----------------~~ 63 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGADV--NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-----------------NA 63 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-----------------TC
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCCC--CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-----------------cc
Confidence 57999999999999999999997776 667889999999999999999999999999885 67
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
++..|.||||+|+..|+.+++++|++.|++++.++..|.| ||++|+..|+.+++++|+
T Consensus 64 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t-~l~~A~~~~~~~~~~~Ll 121 (126)
T 1n0r_A 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT-PLHLAARNGHLEVVKLLL 121 (126)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred cCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCC-HHHHHHHcCcHHHHHHHH
Confidence 8889999999999999999999999999999999999999 999999999999999884
No 12
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=1.3e-29 Score=161.51 Aligned_cols=135 Identities=19% Similarity=0.085 Sum_probs=97.8
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.++...+..+..|.+|
T Consensus 26 ~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 103 (223)
T 2f8y_A 26 ETALHLAARYSRSDAAKRLLEASADA--NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 103 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHT
T ss_pred CchHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhC
Confidence 36788888888888888888877665 55677788888888888888888888888775567777777777
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|
T Consensus 104 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~L 177 (223)
T 2f8y_A 104 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREET-PLFLAAREGSYETAKVL 177 (223)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC-HHHHHHHHTCHHHHHHH
T ss_pred cHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcC-HHHHHHHcCCHHHHHHH
Confidence 122334555666777777777777777777777777777766666777 77777777777777665
No 13
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=2.7e-30 Score=156.88 Aligned_cols=118 Identities=14% Similarity=0.054 Sum_probs=110.5
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.++||.|++.|+.+.+++|++.+.++ +..+..|.||||+|+ .|+.+++++|++.|.++ +.
T Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-----------------~~ 72 (156)
T 1bi7_B 13 ADWLATAAARGRVEEVRALLEAGANP--NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-----------------NC 72 (156)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTTTCCT--TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-----------------CC
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-----------------CC
Confidence 47999999999999999999998776 678889999999985 99999999999999886 67
Q ss_pred cccCCCc-HHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 82 MNRNKES-ALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 82 ~~~~~~t-~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
++..|+| |||+|+..|+.+++++|++.|++++.++..|.| |||+|+..|+.+++++|+
T Consensus 73 ~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t-pl~~A~~~~~~~~v~~Ll 131 (156)
T 1bi7_B 73 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRL-PVDLAEELGHRDVARYLR 131 (156)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCC-HHHHHHHHTCHHHHHHHS
T ss_pred cCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCC-HHHHHHHhCHHHHHHHHH
Confidence 8889998 999999999999999999999999999999999 999999999999999985
No 14
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.6e-29 Score=158.76 Aligned_cols=136 Identities=18% Similarity=0.119 Sum_probs=109.1
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|++.|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+....+..+..|.||
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 117 (201)
T 3hra_A 40 NTPLNIAVHNNDIEIAKALIDRGADI--NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKG 117 (201)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcC
Confidence 36788888888888888888777665 55667778888888888888888888866554467777778887
Q ss_pred ---------Cch-hhhhccccCCCcHHHHHHHcCC-----HHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhh
Q 038923 74 ---------TDS-WVVHMMNRNKESALYVAYERGR-----HDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFAN 138 (140)
Q Consensus 74 ---------~~~-~~~~~~~~~~~t~l~~A~~~~~-----~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~ 138 (140)
..+ ..++..+..|.||||+|+..++ .+++++|++.|++++.++..|.| |||+|+..|+.+++++
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~~A~~~~~~~~~~~ 196 (201)
T 3hra_A 118 HIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRT-AMDYANQKGYTEISKI 196 (201)
T ss_dssp CHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCC-HHHHHHHcCCHhHHHH
Confidence 122 4567778889999999998887 89999999999999999989999 9999999999999988
Q ss_pred hC
Q 038923 139 LV 140 (140)
Q Consensus 139 Ll 140 (140)
|+
T Consensus 197 Ll 198 (201)
T 3hra_A 197 LA 198 (201)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=2.4e-29 Score=164.93 Aligned_cols=137 Identities=17% Similarity=0.095 Sum_probs=110.8
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHH-hhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAII-KQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~-~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~------- 73 (140)
.||||.|++.|+.+++++|++.+.... .+..+..|.||||+|+..|+.+++++|+++|++ ++..+..|.||
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~ 88 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAERGGHTALHLACRV 88 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTSCCHHHHHTTT
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHc
Confidence 479999999999999999998876521 256788899999999999999999999999988 67788888888
Q ss_pred ----------Cc-----------------------------------------------hhhhhccccCCCcHHHHHHHc
Q 038923 74 ----------TD-----------------------------------------------SWVVHMMNRNKESALYVAYER 96 (140)
Q Consensus 74 ----------~~-----------------------------------------------~~~~~~~~~~~~t~l~~A~~~ 96 (140)
.. ...++..+..|.||||+|+..
T Consensus 89 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 168 (282)
T 1oy3_D 89 RAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIH 168 (282)
T ss_dssp TCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHT
T ss_pred CCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHc
Confidence 00 122456677788888888888
Q ss_pred CCHHHHHHHHcCCCccccccCC-CCChHHHHHHHcCCHHHHhhhC
Q 038923 97 GRHDVVKQLLNYPSVSLLEMDD-GLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 97 ~~~~~~~~L~~~~~~~~~~~~~-~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
|+.+++++|++.|++++..+.. |.| |||+|+..|+.+++++|+
T Consensus 169 g~~~~v~~Ll~~g~~~~~~~~~~g~t-pL~~A~~~~~~~~v~~Ll 212 (282)
T 1oy3_D 169 KDAEMVRLLRDAGADLNKPEPTCGRT-PLHLAVEAQAASVLELLL 212 (282)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTTCCC-HHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcC-HHHHHHHcCCHHHHHHHH
Confidence 8888888888888888877754 778 888888888888888774
No 16
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=2.2e-29 Score=152.57 Aligned_cols=134 Identities=22% Similarity=0.242 Sum_probs=113.6
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.++|+.|+..|+.+.++.|++. .....+..+..|.||||+ +..|+.+++++|++.|.+ ++.+|..|.||
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred chHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcC
Confidence 4789999999999999999988 322225678889999999 999999999999999988 67788888888
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++.++..|+||||+|+..|+.+++++|++. ++++.++..|.| |||+|+..|+.+++++|+
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t-~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLT-PLELALQRGAQDLVDILQ 153 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCC-HHHHHHHSCCHHHHHHHH
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCC-HHHHHHHcCcHHHHHHHH
Confidence 23344567788899999999999999999999988 888888888999 999999999999998874
No 17
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=2.6e-29 Score=160.84 Aligned_cols=132 Identities=19% Similarity=0.175 Sum_probs=69.3
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC----------
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP---------- 73 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~---------- 73 (140)
|||.|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||
T Consensus 43 ~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~ 119 (231)
T 3aji_A 43 ALHWACSAGHTEIVEFLLQLGVPV--NDKDDAGWSPLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRH 119 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHcCcHHHHHHHHHhCCCC--CCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCH
Confidence 444444444444444444443332 23334444444444444444444444444444 33444444444
Q ss_pred -------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 -------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 -------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..|+.+++++|
T Consensus 120 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~L 191 (231)
T 3aji_A 120 EIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNT-PLHLACDEERVEEAKFL 191 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCC-HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCC-HHHHHHHCCCHHHHHHH
Confidence 112223445555666666666666666666666666666666666666 66666666666666665
No 18
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.96 E-value=9.6e-30 Score=148.78 Aligned_cols=115 Identities=18% Similarity=0.233 Sum_probs=104.8
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
+++||.|+..|+.+.++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.++ +.
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------~~ 68 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGEDV--NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-----------------NA 68 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCT--TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-----------------TC
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCc--CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-----------------Cc
Confidence 47999999999999999999998776 678889999999999999999999999999986 67
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHH
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTF 136 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~ 136 (140)
++..|+||||+|+..|+.+++++|++.|++++.++..|.| |+|+|...+..+++
T Consensus 69 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~~A~~~~~~~ll 122 (123)
T 3aaa_C 69 PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLT-AFEATDNQAIKALL 122 (123)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHCCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-HHHHhCCHHHHHHh
Confidence 8899999999999999999999999999999999999999 99999655555444
No 19
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=1e-28 Score=157.72 Aligned_cols=136 Identities=17% Similarity=0.191 Sum_probs=79.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhC--CcccCCCCCCCCCC------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLC--PEMLAAPNDKFETP------ 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~--~~~~~~~~~~~~~~------ 73 (140)
+||||.|++.|+.+.++.|++.++... ...+..|.||||+|+..|+.+++++|++.+ .+.....+..|.||
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLL-LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCcccc-ccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 356777777777777777776665542 235566667777777777777777777666 33222255666666
Q ss_pred -----------Cch--hhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 -----------TDS--WVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 -----------~~~--~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..+ ..++..+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQI-PLHRAASVGSLKLIELL 159 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC-HHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCC-HHHHHHHcCCHHHHHHH
Confidence 111 333444455555555555555555555555555555555555555 55555555555555554
No 20
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=5.2e-29 Score=159.07 Aligned_cols=137 Identities=18% Similarity=0.097 Sum_probs=121.3
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhc-CCCCCCcHHHHHHhhCcHHHHHHHHhhC--CcccCCCCCCCCCC-----
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQT-VPGSSNTILHLASRYEHEELALEILKLC--PEMLAAPNDKFETP----- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~~~g~t~l~~A~~~g~~~~~~~Ll~~~--~~~~~~~~~~~~~~----- 73 (140)
.||||.|+..|+.++++.|++.++...... .+..|.||||+|+..|+.+++++|++.+ .+ .+..+..|.||
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~ 115 (228)
T 2dzn_A 37 RIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAV 115 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHH
Confidence 479999999999999999999984442244 7789999999999999999999999998 55 67888899999
Q ss_pred ------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCC-CccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYP-SVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~-~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++.++..|.||||+|+..|+.+++++|++.| ++++.++..|+| |||+|+..|+.+++++|+
T Consensus 116 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t-~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 116 GKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT-PLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp HTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred HcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 234456778889999999999999999999999999 999999999999 999999999999999884
No 21
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=3.7e-29 Score=160.26 Aligned_cols=135 Identities=19% Similarity=0.171 Sum_probs=112.5
Q ss_pred CHHHHHHHHcCCHHHHHHHhhh-chHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCccc----CCCCCCCCCC---
Q 038923 2 DERLFETILKGDVPNFLNLVHE-DEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEML----AAPNDKFETP--- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~----~~~~~~~~~~--- 73 (140)
+||||.|++.|+.+.++.|++. +.++ +..+..|+||||+|+..|+.+++++|++.+++.. ...|..|.||
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEV--HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCc--ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 5789999999999999999987 5555 5678889999999999999999999999988642 4566788888
Q ss_pred --------------Cchhhhhcc-------------ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHH
Q 038923 74 --------------TDSWVVHMM-------------NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHV 126 (140)
Q Consensus 74 --------------~~~~~~~~~-------------~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~ 126 (140)
..+..++.. +..|.||||+|+..|+.+++++|++.|++++.++..|.| |||+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t-~L~~ 160 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNT-VLHI 160 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC-HHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC-HHHH
Confidence 112222333 337999999999999999999999999999999999999 9999
Q ss_pred HHHcCCHHHH----hhh
Q 038923 127 AASAGHLGTF----ANL 139 (140)
Q Consensus 127 A~~~g~~~~~----~~L 139 (140)
|+..|+.+++ ++|
T Consensus 161 A~~~~~~~~~~~i~~~L 177 (232)
T 2rfa_A 161 LILQPNKTFACQMYNLL 177 (232)
T ss_dssp HHTCSCHHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHH
Confidence 9999999988 665
No 22
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=5.1e-29 Score=164.85 Aligned_cols=134 Identities=24% Similarity=0.203 Sum_probs=102.6
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCc-------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTD------- 75 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~------- 75 (140)
||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|++ +...+..|.||..
T Consensus 75 t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~ 151 (299)
T 1s70_B 75 TALHQACIDDNVDMVKFLVENGANI--NQPDNEGWIPLHAAASCGYLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAM 151 (299)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcch
Confidence 5677777777777777777766555 45666677777777777777777777777766 5566667777600
Q ss_pred -----------hhh--------------------------hhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCC
Q 038923 76 -----------SWV--------------------------VHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDD 118 (140)
Q Consensus 76 -----------~~~--------------------------~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~ 118 (140)
+.. ....+..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 152 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~ 231 (299)
T 1s70_B 152 EELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD 231 (299)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT
T ss_pred HHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCC
Confidence 000 0113467899999999999999999999999999999999
Q ss_pred CCChHHHHHHHcCCHHHHhhhC
Q 038923 119 GLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 119 ~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
|.| |||+|+..|+.+++++|+
T Consensus 232 g~t-pL~~A~~~~~~~~v~~Ll 252 (299)
T 1s70_B 232 GWT-PLHAAAHWGKEEACRILV 252 (299)
T ss_dssp CCC-HHHHHHHTTCHHHHHHHH
T ss_pred CCc-HHHHHHhcCCHHHHHHHH
Confidence 999 999999999999999884
No 23
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=5.5e-29 Score=152.14 Aligned_cols=134 Identities=23% Similarity=0.267 Sum_probs=83.9
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
+++|+.|++.|+.+.++.|++..+.. .+..+..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 86 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQSVN-CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTT-CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCC-ccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHcC
Confidence 36899999999999999999865432 244667788999999999999999999999887 44444444444
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..+..++.++..|+||||+|+..|+.+++++|++.|++++.++..|.| |+|+|+. |+.+++++|
T Consensus 87 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~~a~~-~~~~i~~~L 159 (165)
T 3twr_A 87 HYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNT-PLDLVKD-GDTDIQDLL 159 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-TGGGSCT-TCHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCC-hhHhHhc-CChHHHHHH
Confidence 112223344444455555555555555555555555555555544555 5555433 444544444
No 24
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=1.4e-28 Score=157.56 Aligned_cols=137 Identities=18% Similarity=0.225 Sum_probs=118.2
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHh---hcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCC----------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIK---QTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPND---------- 68 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~---~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~---------- 68 (140)
.||||.|+..|+.++++.|++.++.... +..+..|.||||+|+..|+.+++++|++.++++ +..+.
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~ 116 (232)
T 2rfa_A 38 ETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHN 116 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccc
Confidence 4799999999999999999999877532 335568999999999999999999999999874 44433
Q ss_pred ---CCCCC-----------------CchhhhhccccCCCcHHHHHHHcCCHHHH----HHHHcCCCcc------ccccCC
Q 038923 69 ---KFETP-----------------TDSWVVHMMNRNKESALYVAYERGRHDVV----KQLLNYPSVS------LLEMDD 118 (140)
Q Consensus 69 ---~~~~~-----------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~----~~L~~~~~~~------~~~~~~ 118 (140)
.|.|| ..+..++.+|..|+||||+|+..|+.+++ ++|++.|+++ +.++..
T Consensus 117 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~ 196 (232)
T 2rfa_A 117 LIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQ 196 (232)
T ss_dssp SCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTT
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCC
Confidence 78888 34455678899999999999999999988 9999999987 578889
Q ss_pred CCChHHHHHHHcCCHHHHhhhC
Q 038923 119 GLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 119 ~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
|.| |||+|+..|+.+++++|+
T Consensus 197 g~t-pl~~A~~~g~~~~v~~Ll 217 (232)
T 2rfa_A 197 GLT-PFKLAGVEGNIVMFQHLM 217 (232)
T ss_dssp SCC-HHHHHHHHTCHHHHHHHH
T ss_pred CCC-HHHHHHHcCCHHHHHHHH
Confidence 999 999999999999999985
No 25
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=3.7e-29 Score=164.03 Aligned_cols=136 Identities=21% Similarity=0.145 Sum_probs=118.8
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcc-------------------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEM------------------- 62 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~------------------- 62 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+++.
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 1oy3_D 46 QTALHLAAILGEASTVEKLYAAGAGV--LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (282)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcch
Confidence 47999999999999999999998877 677889999999999999999999999987641
Q ss_pred ---------------------------cCCCCCCCCCC-----------------Cchhhhhcccc-CCCcHHHHHHHcC
Q 038923 63 ---------------------------LAAPNDKFETP-----------------TDSWVVHMMNR-NKESALYVAYERG 97 (140)
Q Consensus 63 ---------------------------~~~~~~~~~~~-----------------~~~~~~~~~~~-~~~t~l~~A~~~~ 97 (140)
++..+..|.|| ..+..++..+. .|+||||+|+..|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 203 (282)
T 1oy3_D 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ 203 (282)
T ss_dssp --------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred hcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcC
Confidence 35567788888 22334455554 4999999999999
Q ss_pred CHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 98 RHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 98 ~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.+++++|++.|++++.++..|.| |||+|+..|+.+++++|+
T Consensus 204 ~~~~v~~Ll~~gad~~~~d~~g~t-pL~~A~~~~~~~~v~~Ll 245 (282)
T 1oy3_D 204 AASVLELLLKAGADPTARMYGGRT-PLGSALLRPNPILARLLR 245 (282)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHTSSCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCcccccCCCC-HHHHHHHcCCcHHHHHHH
Confidence 999999999999999999999999 999999999999999984
No 26
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=9.1e-29 Score=161.28 Aligned_cols=133 Identities=19% Similarity=0.187 Sum_probs=97.1
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|++ ++..|..|.||
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAV--NIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcC
Confidence 47888888888888888888887665 56777888888888888888888888888877 67778888888
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..+..++ .+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|
T Consensus 81 ~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~L 153 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQ-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGT-PLYLACENQQRACVKKL 153 (261)
T ss_dssp CHHHHHHHHHTTCCSS-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBC-HHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCC-HHHHHHHhCCHHHHHHH
Confidence 1111111 2334667777777777777777777777777766666666 77777777777776665
No 27
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=3.1e-29 Score=153.26 Aligned_cols=105 Identities=18% Similarity=0.114 Sum_probs=92.2
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 119 (165)
T 3twr_A 43 STPLHFAAGYNRVSVVEYLLQHGADV--HAKDKGGLVPLHNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKG 119 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTT
T ss_pred CCHHHHHHHcChHHHHHHHHhcCCCC--CccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcC
Confidence 37999999999999999999998776 67888999999999999999999999999998 68889999999
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPS 110 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~ 110 (140)
..+..++.++..|.||+++|+. |+.+++++|++.|+
T Consensus 120 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 120 KYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 2344567889999999999877 99999999998875
No 28
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=7.9e-29 Score=160.88 Aligned_cols=134 Identities=17% Similarity=0.158 Sum_probs=119.7
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhch-HHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDE-AIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~------- 73 (140)
.||||.|+..|+.++++.|++.++ .. +..+..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||
T Consensus 91 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~ 167 (253)
T 1yyh_A 91 RTPLHAAVSADAQGVFQILIRNRATDL--DARMHDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAV 167 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTSCT--TCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC-TTCBCTTSCBHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCc--cccCCCCCcHHHHHHHcChHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHc
Confidence 378999999999999999998876 33 56778899999999999999999999999887 67888889998
Q ss_pred ----------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 ----------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 ----------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..+..++.++..|.||||+|+..|+.+++++|+++|++++.++..|.| |+++|+..|+.+++++|
T Consensus 168 ~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t-pl~~A~~~g~~~i~~~l 242 (253)
T 1yyh_A 168 NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRL-PRDIAQERMHHDIVRLL 242 (253)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCC-HHHHHHHcCCHHHHHHH
Confidence 234456788899999999999999999999999999999999999999 99999999999999987
No 29
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.96 E-value=1.2e-29 Score=150.84 Aligned_cols=118 Identities=20% Similarity=0.178 Sum_probs=110.6
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.|+||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.++ +.
T Consensus 11 ~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-----------------~~ 71 (137)
T 3c5r_A 11 ETLLHIASIKGDIPSVEYLLQNGSDP--NVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-----------------NT 71 (137)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC--CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-----------------cC
Confidence 47999999999999999999998776 678889999999999999999999999999986 67
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
++..|.||||+|+..|+.+++++|++.|++++.++..|.| |+++|+..+..+++++|
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-pl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLR-PVDYTDDESMKSLLLLP 128 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-GGGGCCCHHHHHHHSCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-HHHHHhhccHHHHHhhc
Confidence 8889999999999999999999999999999999999999 99999999999988876
No 30
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=1.7e-28 Score=165.00 Aligned_cols=134 Identities=20% Similarity=0.173 Sum_probs=117.9
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCC-CCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVP-GSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~-~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
|+|+.|++.|++++|+.|++.+.++ +..+ ..|+||||+|+..|+.+++++|+++|++ +..++..+.++
T Consensus 27 t~L~~Av~~g~~~~V~~LL~~Gadv--n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 27 HLLIKAVQNEDVDLVQQLLEGGANV--NFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTCCT--TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHT
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCCC--CccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhhccCCCchhHHHHhcc
Confidence 6899999999999999999998877 4454 5699999999999999999999999998 67788888887
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCcccccc----------CCCCChHHHHHHHcCCHH
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEM----------DDGLTTSLHVAASAGHLG 134 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~----------~~~~t~~l~~A~~~g~~~ 134 (140)
.....++..+..|.||+|+|+..|+.+++++|++.|++++... ..|.| |||+|+..|+.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T-~L~~A~~~g~~~ 182 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT-ALMDAAEKGHVE 182 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCC-HHHHHHHHTCHH
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCc-HHHHHHHCCCHH
Confidence 3444567888999999999999999999999999998876543 35788 999999999999
Q ss_pred HHhhhC
Q 038923 135 TFANLV 140 (140)
Q Consensus 135 ~~~~Ll 140 (140)
++++||
T Consensus 183 ~v~~LL 188 (337)
T 4g8k_A 183 VLKILL 188 (337)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999884
No 31
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=2.2e-28 Score=157.08 Aligned_cols=133 Identities=22% Similarity=0.134 Sum_probs=70.5
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
||||.|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.+|
T Consensus 13 t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 89 (237)
T 3b7b_A 13 SPLHAAAEAGHVDICHMLVQAGANI--DTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-VDPKDAEGSTCLHLAAKKGH 89 (237)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CCCCCTTSCCHHHHHHHTTC
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCc--CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCC
Confidence 5666666666666666666665544 44555666666666666666666666666655 44555556655
Q ss_pred --------Cc-hhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 --------TD-SWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 --------~~-~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
.. +..++..+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|
T Consensus 90 ~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~~~~L 163 (237)
T 3b7b_A 90 YEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENI-CLHWAAFSGCVDIAEIL 163 (237)
T ss_dssp HHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCC-HHHHHHHCCCHHHHHHH
Confidence 11 1222333344444444444444444444444444444444444444 44444444444444443
No 32
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=7e-29 Score=162.66 Aligned_cols=117 Identities=21% Similarity=0.183 Sum_probs=60.9
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
||||.|+..|+.++++.|++.++++ +..+..|.||+|+|+..++.+++++|++.|++ ++ .+
T Consensus 88 TpLh~A~~~g~~~~v~~Ll~~~a~~--~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~n----------------~~ 148 (269)
T 4b93_B 88 SPLHVAALHGRADLIPLLLKHGANA--GARNADQAVPLHLACQQGHFQVVKCLLDSNAK-PN----------------KK 148 (269)
T ss_dssp CHHHHHHHTTCTTHHHHHHHTTCCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SC----------------CC
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCCc--CccCCCCCCccccccccChHHHHHHHHHCCCC-CC----------------CC
Confidence 4555555555555555555554444 33445555555555555555555555555554 34 44
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
+..|+||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|
T Consensus 149 d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t-~Lh~A~~~g~~~~v~~L 204 (269)
T 4b93_B 149 DLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNT-ALHEAVIEKHVFVVELL 204 (269)
T ss_dssp CTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCB-HHHHHHHTTCHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCc-HHHHHHHcCCHHHHHHH
Confidence 444555555555555555555555555555555544555 55555555555555444
No 33
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=1.5e-28 Score=165.35 Aligned_cols=61 Identities=36% Similarity=0.311 Sum_probs=54.5
Q ss_pred hhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 79 VHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 79 ~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
++.++..|.||||+|+..|+.+++++|++.|++++..+..|+| |||+|+..|+.+++++|+
T Consensus 240 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t-~L~~A~~~~~~~~v~~Ll 300 (351)
T 3utm_A 240 VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQT-ALHRAALAGHLQTCRLLL 300 (351)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHH
T ss_pred cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC-HHHHHHHcCcHHHHHHHH
Confidence 4556778899999999999999999999999999999989999 999999999999999874
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=1.9e-28 Score=156.04 Aligned_cols=136 Identities=17% Similarity=0.142 Sum_probs=121.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.+|||.|+..|+.++++.|++.++... +..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 136 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNRATDL-DARMHDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVN 136 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBTTSCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcC
Confidence 378999999999999999999876322 56778899999999999999999999999988 67888899998
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++.++..|.||||+|+..|+.+++++|++.|++++.++..|.| |+++|+..|+.+++++|+
T Consensus 137 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~~A~~~~~~~i~~~L~ 211 (223)
T 2f8y_A 137 NVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRL-PRDIAQERMHHDIVRLLD 211 (223)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCC-HHHHHHHhcchHHHHHHH
Confidence 234456778899999999999999999999999999999999999999 999999999999999984
No 35
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.8e-28 Score=151.72 Aligned_cols=119 Identities=20% Similarity=0.257 Sum_probs=90.8
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.++|+.|+..|+.+.++.|++.++... +..+..|.||||+|+..|+.+++++|++.+.++ +.
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------~~ 67 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDL-NQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-----------------NV 67 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TC
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccc-cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-----------------CC
Confidence 367999999999999999999855432 567889999999999999999999999999885 45
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
.+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t-~L~~A~~~~~~~~v~~L 124 (179)
T 3f6q_A 68 MNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNV-PLHYACFWGQDQVAEDL 124 (179)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCC-HHHHHHHcCCHHHHHHH
Confidence 5566666666666666666666666666666666666666 66666666666666665
No 36
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=3.2e-28 Score=155.73 Aligned_cols=136 Identities=21% Similarity=0.233 Sum_probs=121.4
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
+++|+.|++.|+.+.++.++..++... +..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLA-TRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSPLHIAASAG 84 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGG-GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHT
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhh-hcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCHHHHHHHcC
Confidence 578999999999999999999877653 45788999999999999999999999999988 67888899999
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 85 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 159 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDAT-AMHRAAAKGNLKMVHILL 159 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCc-HHHHHHHcCCHHHHHHHH
Confidence 233445677888999999999999999999999999999999989999 999999999999999874
No 37
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=2.8e-28 Score=156.73 Aligned_cols=133 Identities=20% Similarity=0.211 Sum_probs=70.5
Q ss_pred HHHHHHHHcCCHHHHHHHhhh----chHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-----
Q 038923 3 ERLFETILKGDVPNFLNLVHE----DEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP----- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~----~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~----- 73 (140)
|+||.|+..|+.+++++|++. +..+ +..+..|.||||+|+..|+.+++++|++.|.+ ++..+..|.+|
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~ 87 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQQGGREL--DIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDRHGQTAAHLAC 87 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHhcCCCC--CcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHH
Confidence 456666666666666655542 2222 33445555566665555555555555555554 34445555555
Q ss_pred -------------------------------------------------Cchhhhhccc-cCCCcHHHHHHHcCCHHHHH
Q 038923 74 -------------------------------------------------TDSWVVHMMN-RNKESALYVAYERGRHDVVK 103 (140)
Q Consensus 74 -------------------------------------------------~~~~~~~~~~-~~~~t~l~~A~~~~~~~~~~ 103 (140)
..+..++..+ ..|.||||+|+..|+.++++
T Consensus 88 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 167 (241)
T 1k1a_A 88 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ 167 (241)
T ss_dssp HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHH
Confidence 1111223333 34555555555555555555
Q ss_pred HHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 104 QLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 104 ~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
+|++.|++++..+..|.| |||+|+..|+.+++++|
T Consensus 168 ~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~L 202 (241)
T 1k1a_A 168 LLLQHGANVNAQMYSGSS-ALHSASGRGLLPLVRTL 202 (241)
T ss_dssp HHHHTTCCTTCBCTTSCB-HHHHHHHHTCHHHHHHH
T ss_pred HHHHcCCCCCCcCCCCCC-HHHHHHHcCCHHHHHHH
Confidence 555555555555555555 55555555555555554
No 38
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=3.1e-28 Score=156.37 Aligned_cols=136 Identities=18% Similarity=0.164 Sum_probs=112.2
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.+|||.|+..|+.+++++|++.+..+ +..+..|.||||+|+..|+.+++++|++.+....+..+..|.+|
T Consensus 45 ~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 122 (237)
T 3b7b_A 45 RTPLMEAAENNHLEAVKYLIKAGALV--DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK 122 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCC--CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC
Confidence 36889999999999999998887665 56777888999999999999999999988854477788888888
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 123 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 197 (237)
T 3b7b_A 123 HVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDS-PLHIAARENRYDCVVLFL 197 (237)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCC-HHHHHHHhCCHhHHHHHH
Confidence 223345667778888999999999999999999888888888888888 999999999888888774
No 39
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=161.90 Aligned_cols=134 Identities=20% Similarity=0.212 Sum_probs=92.7
Q ss_pred HHHHHHHHcCCHHHHHHHhhhch-HHHhhcCCCCCCcHHHHHH-----hhCcHHHHHHHHhhCCcccCCCCCCCCCC---
Q 038923 3 ERLFETILKGDVPNFLNLVHEDE-AIIKQTVPGSSNTILHLAS-----RYEHEELALEILKLCPEMLAAPNDKFETP--- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~~~g~t~l~~A~-----~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--- 73 (140)
||||.|+..|+.++++.|++.+. .. +..+..|.||||+|+ ..++.+++++|++.+.. ....+..|.||
T Consensus 113 T~Lh~A~~~g~~~~v~~Ll~~g~~~~--~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~ 189 (276)
T 4hbd_A 113 TALHYSVSHANFPVVQQLLDSGVCKV--DKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALML 189 (276)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTSCCCT--TCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCcC--CCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHH
Confidence 67777777777777777777765 33 345555666666665 44556666666666544 44555556665
Q ss_pred --------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHc-CCCccccccCCCCChHHHHHHHcCCHHHHhh
Q 038923 74 --------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLN-YPSVSLLEMDDGLTTSLHVAASAGHLGTFAN 138 (140)
Q Consensus 74 --------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~-~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~ 138 (140)
..+..++.++..|+||||+|+..|+.+++++|++ .|++++.++..|.| |||+|+..|+.+++++
T Consensus 190 A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~T-pL~~A~~~g~~~iv~~ 268 (276)
T 4hbd_A 190 AVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGST-ALMVALDAGQSEIASM 268 (276)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCC-HHHHHHHHTCHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCC-HHHHHHHcCCHHHHHH
Confidence 2233346677788888888888888888888887 78888888877888 8888888888888877
Q ss_pred hC
Q 038923 139 LV 140 (140)
Q Consensus 139 Ll 140 (140)
|+
T Consensus 269 Ll 270 (276)
T 4hbd_A 269 LY 270 (276)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 40
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=2e-28 Score=153.71 Aligned_cols=135 Identities=22% Similarity=0.216 Sum_probs=119.1
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhch-HHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDE-AIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~------- 73 (140)
.++|+.|+..|+.+.++.|+..++ .+ +..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQV--DEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHT
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHc
Confidence 478999999999999999999876 44 56788999999999999999999999999998 67888899999
Q ss_pred -----------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCC-CccccccCCCCChHHHHHHHcCC-----HHHH
Q 038923 74 -----------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYP-SVSLLEMDDGLTTSLHVAASAGH-----LGTF 136 (140)
Q Consensus 74 -----------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~-~~~~~~~~~~~t~~l~~A~~~g~-----~~~~ 136 (140)
.....++..+..|.||||+|+..|+.+++++|++.| ++++..+..|.| |||+|+..++ .+++
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t-~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYT-ALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCC-HHHHHHHSSCCSHHHHHHH
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCC-HHHHHHHhccchhhHHHHH
Confidence 122245677788999999999999999999999888 899999999999 9999999988 8999
Q ss_pred hhhC
Q 038923 137 ANLV 140 (140)
Q Consensus 137 ~~Ll 140 (140)
++|+
T Consensus 162 ~~Ll 165 (201)
T 3hra_A 162 KLLM 165 (201)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=3e-29 Score=161.18 Aligned_cols=134 Identities=18% Similarity=0.052 Sum_probs=85.1
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcc-----cCCCCCCCCCC----
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEM-----LAAPNDKFETP---- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~-----~~~~~~~~~~~---- 73 (140)
||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.+. ....+..|.||
T Consensus 47 t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A 124 (236)
T 1ikn_D 47 TPLHLAVITNQPEIAEALLGAGCDP--ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124 (236)
T ss_dssp CHHHHHHHTTCHHHHHCCCSCCCCS--CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHH
Confidence 5677777777777777777666555 455666777777777777777777777766431 34455555665
Q ss_pred -------------Cchhhhhcccc-CCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 -------------TDSWVVHMMNR-NKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 -------------~~~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..+..++..+. .|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|
T Consensus 125 ~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-pl~~A~~~~~~~~~~~L 203 (236)
T 1ikn_D 125 SIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS-PYQLTWGRPSTRIQQQL 203 (236)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCC-GGGGCTTSSCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCC-HHHHHHccCchHHHHHH
Confidence 12222344454 6666666666666666666666666666666666666 66666666666666665
No 42
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=2.3e-28 Score=161.27 Aligned_cols=132 Identities=19% Similarity=0.201 Sum_probs=90.0
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+++ ++..|..|.||
T Consensus 61 t~L~~Aa~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~~~ 137 (285)
T 3d9h_A 61 SPMHEAAIHGHQLSLRNLISQGWAV--NIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGS 137 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCS--CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTC
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCH
Confidence 6788888888888888888877665 56677888888888888888888888888877 57777788887
Q ss_pred --------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 --------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 --------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
.....++ .+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|
T Consensus 138 ~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t-~L~~A~~~~~~~~v~~L 209 (285)
T 3d9h_A 138 WDCVNLLLQHGASVQ-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGT-PLYLACENQQRACVKKL 209 (285)
T ss_dssp HHHHHHHHHTTCCSS-CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBC-HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC-HHHHHHHcCcHHHHHHH
Confidence 0111111 1233556666666666666666666666666666656666 66666666666666555
No 43
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=7.6e-29 Score=159.10 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=110.6
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
++||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|+++ +..
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-----------------n~~ 83 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKEMNDP--SQPNEEGITALHNAICGANYSIVDFLITAGANV-----------------NSP 83 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHSSCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TCC
T ss_pred HHHHHHHHcCCHHHHHHHHhcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-----------------CCC
Confidence 6899999999999999999998876 678899999999999999999999999999986 678
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCcccccc-CCCCChHHHHH--HHcCCHHHHhhhC
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEM-DDGLTTSLHVA--ASAGHLGTFANLV 140 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~-~~~~t~~l~~A--~~~g~~~~~~~Ll 140 (140)
+..|+||||+|+..|+.+++++|++.|++++..+ ..|+| |||+| +..|+.+++++|+
T Consensus 84 d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t-pL~~A~a~~~~~~~~v~~Ll 143 (229)
T 2vge_A 84 DSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGAT-AFEKCDPYREGYADCATYLA 143 (229)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCC-TGGGCCTTSTTHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCC-HHHHHHHHhcChHHHHHHHH
Confidence 8999999999999999999999999999999987 48999 99999 9999999999884
No 44
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=7.4e-28 Score=154.77 Aligned_cols=109 Identities=24% Similarity=0.215 Sum_probs=84.9
Q ss_pred hcCCCCCCcHHHHHHhhCcHHHHHHHHh----hCCcccCCCCCCCCCC-----------------CchhhhhccccCCCc
Q 038923 30 QTVPGSSNTILHLASRYEHEELALEILK----LCPEMLAAPNDKFETP-----------------TDSWVVHMMNRNKES 88 (140)
Q Consensus 30 ~~~~~~g~t~l~~A~~~g~~~~~~~Ll~----~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~t 88 (140)
+..|..|.||||+|+..|+.+++++|++ .+.+ ++..+..|.|| ..+..++..+..|.|
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 81 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT 81 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC-CCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 3567899999999999999999999997 4555 78889999999 233345566778888
Q ss_pred HHHHHHHcCCHHHHHHHHcCCC----ccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 89 ALYVAYERGRHDVVKQLLNYPS----VSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 89 ~l~~A~~~~~~~~~~~L~~~~~----~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
|||+|+..|+.+++++|++.+. +++..+..|.| |||+|+..|+.+++++|+
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll 136 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLT-ALHVAVNTECQETVQLLL 136 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCc-HHHHHHHcCCHHHHHHHH
Confidence 8888888888888888887776 67777777777 888888888888877763
No 45
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=1.6e-28 Score=159.73 Aligned_cols=119 Identities=17% Similarity=0.168 Sum_probs=108.9
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCC--------------CCCCcHHHHHHhhCcHHHHHHHHh---hCCcccC
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVP--------------GSSNTILHLASRYEHEELALEILK---LCPEMLA 64 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~--------------~~g~t~l~~A~~~g~~~~~~~Ll~---~~~~~~~ 64 (140)
.||||.|+..|+.++++.|++.+.++ +..+ ..|.||||+|+..|+.+++++|++ .|+++
T Consensus 94 ~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~-- 169 (260)
T 3jxi_A 94 QTALHIAIERRCKHYVELLVEKGADV--HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL-- 169 (260)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT--
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCc--CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC--
Confidence 37999999999999999999998777 5555 579999999999999999999999 78876
Q ss_pred CCCCCCCCCCchhhhhccccCCCcHHHHHHHcCC---------HHHHHHHHcCCCcc-------ccccCCCCChHHHHHH
Q 038923 65 APNDKFETPTDSWVVHMMNRNKESALYVAYERGR---------HDVVKQLLNYPSVS-------LLEMDDGLTTSLHVAA 128 (140)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~---------~~~~~~L~~~~~~~-------~~~~~~~~t~~l~~A~ 128 (140)
+.++..|+||||+|+..++ .+++++|++.|+++ +..+..|.| |||+|+
T Consensus 170 ---------------~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~t-pL~~A~ 233 (260)
T 3jxi_A 170 ---------------RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLS-PLMMAA 233 (260)
T ss_dssp ---------------TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCC-HHHHHH
T ss_pred ---------------cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCC-HHHHHH
Confidence 7889999999999999887 79999999999998 678989999 999999
Q ss_pred HcCCHHHHhhhC
Q 038923 129 SAGHLGTFANLV 140 (140)
Q Consensus 129 ~~g~~~~~~~Ll 140 (140)
..|+.+++++|+
T Consensus 234 ~~g~~~~v~~Ll 245 (260)
T 3jxi_A 234 KTGKIGIFQHII 245 (260)
T ss_dssp HTTCHHHHHHHH
T ss_pred HcCCHHHHHHHH
Confidence 999999999985
No 46
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.5e-28 Score=158.56 Aligned_cols=118 Identities=15% Similarity=0.110 Sum_probs=105.6
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
++||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|+++ +.+
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-----------------~~~ 99 (239)
T 1ycs_B 39 ALLLDSSLEGEFDLVQRIIYEVDDP--SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV-----------------NAA 99 (239)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSC--CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-----------------TCC
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------Ccc
Confidence 6899999999999999999888765 667888999999999999999999999998886 678
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCC-ChHHHHH--HHcCCHHHHhhhC
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGL-TTSLHVA--ASAGHLGTFANLV 140 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~-t~~l~~A--~~~g~~~~~~~Ll 140 (140)
+..|+||||+|+..|+.+++++|++.|++++..+..|. | |+|+| +..|+.+++++|+
T Consensus 100 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t-~l~~a~~~~~g~~~~~~~Ll 159 (239)
T 1ycs_B 100 DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQT-AADKCEEMEEGYTQCSQFLY 159 (239)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCC-HHHHCCSSSTTCCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcc-hHHHHHHhhhccHHHHHHHH
Confidence 88999999999999999999999999999999998777 7 99999 7889999999874
No 47
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=1.9e-28 Score=159.15 Aligned_cols=119 Identities=17% Similarity=0.187 Sum_probs=109.4
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCC-------------CCcHHHHHHhhCcHHHHHHHHh---hCCcccCC
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGS-------------SNTILHLASRYEHEELALEILK---LCPEMLAA 65 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~-------------g~t~l~~A~~~g~~~~~~~Ll~---~~~~~~~~ 65 (140)
.||||.|+..|+.++++.|++.+.++ +..+.. |.||||+|+..|+.+++++|++ .|+++
T Consensus 91 ~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~--- 165 (256)
T 2etb_A 91 HSALHIAIEKRSLQCVKLLVENGADV--HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL--- 165 (256)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT---
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC--CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc---
Confidence 37999999999999999999998776 555554 9999999999999999999999 88886
Q ss_pred CCCCCCCCCchhhhhccccCCCcHHHHHHH--cCCHH-------HHHHHHcCCCcc-------ccccCCCCChHHHHHHH
Q 038923 66 PNDKFETPTDSWVVHMMNRNKESALYVAYE--RGRHD-------VVKQLLNYPSVS-------LLEMDDGLTTSLHVAAS 129 (140)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~--~~~~~-------~~~~L~~~~~~~-------~~~~~~~~t~~l~~A~~ 129 (140)
+.++..|+||||+|+. .++.+ ++++|++.|+++ +.++..|.| |||+|+.
T Consensus 166 --------------n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~t-pL~~A~~ 230 (256)
T 2etb_A 166 --------------EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLT-PLKLAAK 230 (256)
T ss_dssp --------------TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCC-HHHHHHH
T ss_pred --------------CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCC-HHHHHHH
Confidence 7889999999999999 78888 999999999999 899999999 9999999
Q ss_pred cCCHHHHhhhC
Q 038923 130 AGHLGTFANLV 140 (140)
Q Consensus 130 ~g~~~~~~~Ll 140 (140)
.|+.+++++|+
T Consensus 231 ~g~~~~v~~Ll 241 (256)
T 2etb_A 231 EGKIEIFRHIL 241 (256)
T ss_dssp TTCHHHHHHHH
T ss_pred hCCHHHHHHHH
Confidence 99999999985
No 48
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=2e-28 Score=160.99 Aligned_cols=137 Identities=20% Similarity=0.202 Sum_probs=122.3
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCC--------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPT-------- 74 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~-------- 74 (140)
+++|.|+..|+++.++.++....+...+..|..|+||||+|+..|+.+++++|++.|+...+..+..|.||.
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~ 157 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATL 157 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHh
Confidence 457889999999999999998877666889999999999999999999999999999855889999999991
Q ss_pred --------------chhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 75 --------------DSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 75 --------------~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.+...+..+..|+||||+|+..|+.+++++|++.|++++.++..|+| |||+|+..|+.+++++|+
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~T-pLh~A~~~g~~~iv~~Ll 236 (276)
T 4hbd_A 158 KTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGST-ALMCACEHGHKEIAGLLL 236 (276)
T ss_dssp CSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHHTCHHHHHHHH
T ss_pred hhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCC-HHHHHHHCCCHHHHHHHH
Confidence 12234456678999999999999999999999999999999999999 999999999999999884
No 49
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.3e-28 Score=152.44 Aligned_cols=119 Identities=16% Similarity=0.134 Sum_probs=112.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.++ +.
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------~~ 100 (179)
T 3f6q_A 40 FSPLHWACREGRSAVVEMLIMRGARI--NVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI-----------------NA 100 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TC
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------Cc
Confidence 37999999999999999999998777 678889999999999999999999999999986 67
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.+..|.||||+|+..|+.+++++|++.|++++.++..|.| |+++|+..++.+++++|+
T Consensus 101 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-pl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 101 VNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEM-PVDKAKAPLRELLRERAE 158 (179)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCC-GGGGSCHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCC-cHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999 999999999999998873
No 50
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=5.3e-28 Score=157.67 Aligned_cols=133 Identities=18% Similarity=0.140 Sum_probs=117.5
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.++++. .+.+|.||
T Consensus 37 ~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~ 112 (261)
T 2xai_A 37 VSPLHEACLGGHLSCVKILLKHGAQV--NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRG 112 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcC
Confidence 47999999999999999999998776 6788899999999999999999999999998743 34558888
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++. +..|.| |||+|+..|+.+++++|+
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t-~Lh~A~~~~~~~~v~~Ll 186 (261)
T 2xai_A 113 HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDS-PLHAVARTASEELACLLM 186 (261)
T ss_dssp CHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBC-HHHHHHHHTCHHHHHHHH
T ss_pred cHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCC-hHHHHHHcCCHHHHHHHH
Confidence 23445677888999999999999999999999999999985 668999 999999999999999884
No 51
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=3.1e-29 Score=161.12 Aligned_cols=137 Identities=20% Similarity=0.176 Sum_probs=118.3
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHH--HhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAI--IKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP------ 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~--~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~------ 73 (140)
.||||.|+..|+.++++.|++.+... ..+..+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||
T Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 87 (236)
T 1ikn_D 9 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELRDFRGNTPLHLACE 87 (236)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCCCTTCCCHHHHHHH
T ss_pred CchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHH
Confidence 47999999999999999999986542 2356788899999999999999999999999998 68889999999
Q ss_pred --------------Cc---hhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccC-CCCChHHHHHHHcCCHHH
Q 038923 74 --------------TD---SWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMD-DGLTTSLHVAASAGHLGT 135 (140)
Q Consensus 74 --------------~~---~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~-~~~t~~l~~A~~~g~~~~ 135 (140)
.. ...++..+..|.||||+|+..|+.+++++|++.|++++..+. .|.| |||+|+..|+.++
T Consensus 88 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t-pL~~A~~~~~~~~ 166 (236)
T 1ikn_D 88 QGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRT-ALHLAVDLQNPDL 166 (236)
T ss_dssp HTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCC-HHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-HHHHHHHcCCHHH
Confidence 00 122567778899999999999999999999999999999997 8999 9999999999999
Q ss_pred HhhhC
Q 038923 136 FANLV 140 (140)
Q Consensus 136 ~~~Ll 140 (140)
+++|+
T Consensus 167 v~~Ll 171 (236)
T 1ikn_D 167 VSLLL 171 (236)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99984
No 52
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.95 E-value=1.1e-28 Score=157.46 Aligned_cols=119 Identities=18% Similarity=0.194 Sum_probs=109.2
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhh-CCcccCCCCCCCCCCCchhhhh
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKL-CPEMLAAPNDKFETPTDSWVVH 80 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~ 80 (140)
.|+||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++. +.++ +
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-----------------~ 134 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVGV--NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-----------------N 134 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-----------------C
T ss_pred ccccccccccCcHHHHHHHHhCCCCc--cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-----------------c
Confidence 47999999999999999999988776 67888999999999999999999999998 7775 6
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 81 MMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 81 ~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..|+||||+|+..|+.+++++|++.|++++.++..|.| ||++|+..|+.++++.|+
T Consensus 135 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~~A~~~~~~~~l~~l~ 193 (222)
T 3ehr_A 135 QQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKL-AFDMATNAACASLLKKKQ 193 (222)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCC-HHHHCCSHHHHHHHC---
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCC-HHHHhcchhHHHHHHHHh
Confidence 78899999999999999999999999999999999999999 999999999999998764
No 53
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=6.5e-28 Score=163.62 Aligned_cols=124 Identities=16% Similarity=0.090 Sum_probs=113.0
Q ss_pred CHHHHHHHHcC--CHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhh
Q 038923 2 DERLFETILKG--DVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVV 79 (140)
Q Consensus 2 ~~~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 79 (140)
.||||.|+..| +.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+++. ....+
T Consensus 139 ~t~L~~A~~~g~~~~~~v~~Ll~~ga~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------------~~~~~ 204 (364)
T 3ljn_A 139 QTALHWCVGLGPEYLEMIKILVQLGASP--TAKDKADETPLMRAMEFRNREALDLMMDTVPSK------------SSLRL 204 (364)
T ss_dssp CCHHHHHHHSCGGGHHHHHHHHHHTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCS------------SSCCT
T ss_pred CCHHHHHHHcCCchHHHHHHHHHcCCCC--cccCCCCCCHHHHHHHcCCHHHHHHHHhccccc------------ccccc
Confidence 47999999999 999999999998777 678899999999999999999999999999872 11112
Q ss_pred hccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 80 HMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 80 ~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+..+..|+||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 205 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t-pL~~A~~~g~~~~v~~Ll 264 (364)
T 3ljn_A 205 DYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTV-PLYLSVRAAMVLLTKELL 264 (364)
T ss_dssp TCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCC-HHHHHHHTCCHHHHHHHH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-HHHHHHHhChHHHHHHHH
Confidence 678899999999999999999999999999999999999999 999999999999999985
No 54
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.95 E-value=8.4e-28 Score=149.33 Aligned_cols=109 Identities=19% Similarity=0.225 Sum_probs=100.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.||||.|++.|+.+.++.|++ +.++ +..+..|.||||+|+..|+.+++++|++.|+++ +.
T Consensus 45 ~t~L~~A~~~g~~~~v~~Ll~-~~~~--~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-----------------~~ 104 (183)
T 3deo_A 45 ETPWWTAARKADEQALSQLLE-DRDV--DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-----------------DH 104 (183)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT-TSCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-----------------TC
T ss_pred CCHHHHHHHcCCHHHHHHHHh-cCCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------Cc
Confidence 378999999999999999999 6555 678899999999999999999999999999986 56
Q ss_pred cc-cCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcC
Q 038923 82 MN-RNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAG 131 (140)
Q Consensus 82 ~~-~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g 131 (140)
.+ ..|+||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..+
T Consensus 105 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t-pl~~A~~~~ 154 (183)
T 3deo_A 105 RDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLT-ALELAREIL 154 (183)
T ss_dssp CCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC-HHHHHHHHH
T ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCC-HHHHHHHhc
Confidence 66 88999999999999999999999999999999999999 999998764
No 55
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=1.2e-27 Score=153.50 Aligned_cols=134 Identities=18% Similarity=0.209 Sum_probs=105.7
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
+|||.|+..|+.++++.|++.+..+ +..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.+|
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 78 TPLHWATRQGHLSMVVQLMKYGADP--SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD-VDMMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCC
T ss_pred ChhHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC-ccccCCCCCcHHHHHHHhCC
Confidence 5677777777777777777766555 45666777777777777777777777777776 56667777777
Q ss_pred ---------Cchhhhhcccc-CCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNR-NKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++..+. .|.||||+|+..|+.+++++|++.|++++..+..|.| |+++|+..|+.+++++|+
T Consensus 155 ~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-~l~~A~~~~~~~~v~~L~ 230 (240)
T 3eu9_A 155 SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGES-ALDLAKQRKNVWMINHLQ 230 (240)
T ss_dssp SSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCB-HHHHHHHTTCHHHHHHHH
T ss_pred hHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-HHHHHHHcCcHHHHHHHH
Confidence 12223444554 7889999999999999999999999999999999999 999999999999999874
No 56
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=5.3e-28 Score=158.41 Aligned_cols=119 Identities=18% Similarity=0.217 Sum_probs=108.5
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCC--------------CCCcHHHHHHhhCcHHHHHHHHh---hCCcccC
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPG--------------SSNTILHLASRYEHEELALEILK---LCPEMLA 64 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~--------------~g~t~l~~A~~~g~~~~~~~Ll~---~~~~~~~ 64 (140)
.||||.|+..|+.++++.|++.+.++ +..+. .|.||||+|+..|+.+++++|++ .|.++
T Consensus 102 ~tpL~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~-- 177 (273)
T 2pnn_A 102 QTALHIAIERRNMTLVTLLVENGADV--QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI-- 177 (273)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT--TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT--
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCc--CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc--
Confidence 47999999999999999999998776 44554 79999999999999999999999 88876
Q ss_pred CCCCCCCCCCchhhhhccccCCCcHHHHHHHcCC---------HHHHHHHHcCCCccc-------cccCCCCChHHHHHH
Q 038923 65 APNDKFETPTDSWVVHMMNRNKESALYVAYERGR---------HDVVKQLLNYPSVSL-------LEMDDGLTTSLHVAA 128 (140)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~---------~~~~~~L~~~~~~~~-------~~~~~~~t~~l~~A~ 128 (140)
+.++..|+||||+|+..|+ .+++++|++.|++++ .++..|.| |||+|+
T Consensus 178 ---------------~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~T-pL~~A~ 241 (273)
T 2pnn_A 178 ---------------SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLT-PLALAA 241 (273)
T ss_dssp ---------------TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCC-HHHHHH
T ss_pred ---------------eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCC-HHHHHH
Confidence 7889999999999999998 899999999999986 48889999 999999
Q ss_pred HcCCHHHHhhhC
Q 038923 129 SAGHLGTFANLV 140 (140)
Q Consensus 129 ~~g~~~~~~~Ll 140 (140)
..|+.+++++|+
T Consensus 242 ~~g~~~iv~~Ll 253 (273)
T 2pnn_A 242 SSGKIGVLAYIL 253 (273)
T ss_dssp HTTCHHHHHHHH
T ss_pred HhChHHHHHHHH
Confidence 999999999985
No 57
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.95 E-value=2.4e-27 Score=156.03 Aligned_cols=120 Identities=18% Similarity=0.143 Sum_probs=110.1
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHH----hhcCCCCCCcHHHHHHhh---CcHHHHHHHHhhCCcccCCCCCCCCCCCc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAII----KQTVPGSSNTILHLASRY---EHEELALEILKLCPEMLAAPNDKFETPTD 75 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~----~~~~~~~g~t~l~~A~~~---g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 75 (140)
++|+.|+..|+++.++.++..+.+.. .+..+..|.||||+|+.. |+.+++++|++.|+++
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i------------- 198 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL------------- 198 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-------------
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-------------
Confidence 47999999999999999999887652 233467899999999999 8999999999999986
Q ss_pred hhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 76 SWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 76 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.++..|+||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..|+.+++++|+
T Consensus 199 ----n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t-pL~~A~~~~~~~~v~~Ll 258 (278)
T 1dcq_A 199 ----DKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGET-PLDIAKRLKHEHCEELLT 258 (278)
T ss_dssp ----TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred ----cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 788999999999999999999999999999999999999999 999999999999999884
No 58
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.95 E-value=8.7e-28 Score=155.43 Aligned_cols=117 Identities=20% Similarity=0.230 Sum_probs=105.4
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.||||.|++.|+.++++.|++ +.++ +..+..|.||||+|+..|+.+++++|++.|+++ +.
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~-~~~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-----------------~~ 105 (244)
T 3ui2_A 46 ETPWWTAARKADEQALSQLLE-DRDV--DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-----------------DH 105 (244)
T ss_dssp HHHHHHHHTTTCHHHHHHTTT-TCCT--TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-----------------TC
T ss_pred CCHHHHHHHcCCHHHHHHHHc-CCCC--CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-----------------Cc
Confidence 379999999999999999999 6555 668889999999999999999999999999986 56
Q ss_pred cc-cCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHH----------------HcCCHHHHhhh
Q 038923 82 MN-RNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAA----------------SAGHLGTFANL 139 (140)
Q Consensus 82 ~~-~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~----------------~~g~~~~~~~L 139 (140)
.+ ..|+||||+|+..|+.+++++|++.|++++.++..|.| |||+|+ ..|+.+++++|
T Consensus 106 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L 179 (244)
T 3ui2_A 106 RDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLT-ALELAREILKTTPKGNPMQFGRRIGLEKVINVL 179 (244)
T ss_dssp CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC-HHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc-HHHHHHHHHhccCCCCHHHHHHHcChHHHHHHH
Confidence 66 78999999999999999999999999999999999999 988887 55777777766
No 59
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=2.4e-27 Score=156.39 Aligned_cols=133 Identities=17% Similarity=0.120 Sum_probs=116.9
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.++ +. +..|.||
T Consensus 93 ~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~-~~~g~t~L~~A~~~g 168 (285)
T 3d9h_A 93 VSPLHEACLGGHLSCVKILLKHGAQV--NGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-QP-ESDLASPIHEAARRG 168 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCS--SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-SC-SCTTSCHHHHHHHHT
T ss_pred CCHHHHHHHCCcHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-CC-CCCCCCHHHHHHHcC
Confidence 47999999999999999999998776 678889999999999999999999999999874 32 3458888
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++. +..|.| |||+|+..|+.+++++|+
T Consensus 169 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t-~L~~A~~~~~~~~v~~Ll 242 (285)
T 3d9h_A 169 HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDS-PLHAVVRTASEELACLLM 242 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBC-HHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 23344677888999999999999999999999999999985 668999 999999999999999884
No 60
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=1.7e-27 Score=164.86 Aligned_cols=132 Identities=24% Similarity=0.185 Sum_probs=61.3
Q ss_pred HHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC----------
Q 038923 4 RLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP---------- 73 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~---------- 73 (140)
|||.|+..|+.++++.|++.+... +..+..|.||||+|+..|+.+++++|++.+++ .+..+..|.||
T Consensus 215 ~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~ 291 (437)
T 1n11_A 215 PLHIAAKQNQVEVARSLLQYGGSA--NAESVQGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHV 291 (437)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCH
Confidence 444444444444444444443332 23334444444444444444444444444444 33444444444
Q ss_pred -------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 -------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 -------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..|+.+++++|
T Consensus 292 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t-~L~~A~~~g~~~iv~~L 363 (437)
T 1n11_A 292 PVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYS-PLHQAAQQGHTDIVTLL 363 (437)
T ss_dssp HHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCC-HHHHHHHCChHHHHHHH
Confidence 111223344444555555555555555555555555555555544555 55555555555555444
No 61
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=159.95 Aligned_cols=118 Identities=19% Similarity=0.089 Sum_probs=107.8
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.+|++.|+..++.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|+++ +.
T Consensus 120 ~t~l~~a~~~~~~~~~~~Ll~~g~~~--n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-----------------n~ 180 (269)
T 4b93_B 120 AVPLHLACQQGHFQVVKCLLDSNAKP--NKKDLSGNTPLIYACSGGHHELVALLLQHGASI-----------------NA 180 (269)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCT-----------------TC
T ss_pred CCccccccccChHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-----------------Cc
Confidence 47899999999999999999998877 678899999999999999999999999999986 78
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCC-HHHHhhh
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGH-LGTFANL 139 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~-~~~~~~L 139 (140)
.+..|+||||+|+..|+.+++++|++.|++++.++..|+| |||+|+.+++ .+++++|
T Consensus 181 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~T-pL~~A~~~~~i~~lL~~l 238 (269)
T 4b93_B 181 SNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRT-AVDCAEQNSKIMELLQVV 238 (269)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC-SGGGSCTTCHHHHHTTC-
T ss_pred cccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC-HHHHHHhCCcHHHHHHHH
Confidence 8999999999999999999999999999999999999999 9999998876 3455443
No 62
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=1.8e-27 Score=157.10 Aligned_cols=132 Identities=16% Similarity=0.198 Sum_probs=102.8
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.++++.|++.+.++ +.. +|.||||+|+..|+.+++++|++.|++ ++.++..|.||
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g 106 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALK--NLL--ENEFPLHQAATLEDTKIVKILLFSGLD-DSQFDDKGNTALYYAVDSG 106 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGG--SCC--TTCCHHHHHTTSSSCHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCC--CCC--CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHcC
Confidence 47999999999999999999998776 333 589999999999999999999999998 56677777777
Q ss_pred ---------CchhhhhccccCC-CcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 ---------TDSWVVHMMNRNK-ESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~-~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+..++..+..| .||||+|+..|+.+++++|++.|++..... .|.| |||+|+..|+.+++++|+
T Consensus 107 ~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t-~L~~A~~~g~~~~v~~Ll 181 (285)
T 3kea_A 107 NMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLA-ILLS-CIHITIKNGHVDMMILLL 181 (285)
T ss_dssp CHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCS-THHH-HHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccccc-CCcc-HHHHHHHcChHHHHHHHH
Confidence 2334456666667 578888887778788888777776652221 5666 888888888877777763
No 63
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=6.3e-27 Score=153.34 Aligned_cols=135 Identities=20% Similarity=0.177 Sum_probs=113.7
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcC-CCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTV-PGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~------- 73 (140)
.++|+.|++.|+.+.++.|++.++++ +.. +..|.||||+|+..|+.+++++|++.|.+ +...+..|.||
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANV--NFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCc--ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHc
Confidence 37899999999999999999998766 333 67899999999999999999999999988 67778888888
Q ss_pred ----------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccc----------cCCCCChHHHHHHHcCCH
Q 038923 74 ----------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLE----------MDDGLTTSLHVAASAGHL 133 (140)
Q Consensus 74 ----------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~----------~~~~~t~~l~~A~~~g~~ 133 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++.. +..|.| |||+|+..|+.
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t-~L~~A~~~~~~ 161 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT-ALMDAAEKGHV 161 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCC-HHHHHHHHTCH
T ss_pred CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCc-HHHHHHHcCCH
Confidence 223345667788889999999999999999999888888776 566888 99999999999
Q ss_pred HHHhhhC
Q 038923 134 GTFANLV 140 (140)
Q Consensus 134 ~~~~~Ll 140 (140)
+++++|+
T Consensus 162 ~~v~~Ll 168 (285)
T 1wdy_A 162 EVLKILL 168 (285)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888774
No 64
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=6.5e-28 Score=150.34 Aligned_cols=132 Identities=11% Similarity=0.084 Sum_probs=100.6
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcH----HHHHHHHhhCCcccCCCCCCCCCC-----
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHE----ELALEILKLCPEMLAAPNDKFETP----- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~----~~~~~Ll~~~~~~~~~~~~~~~~~----- 73 (140)
++|+.|++.|+.+.++.++..+... ..+..|+||||+|+..|+. +++++|++.|++ ++.+|..|.||
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~---~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYED---KESVLKSNILYDVLRNNNDEARYKISMFLINKGAD-IKSRTKEGTTLFFPLF 83 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSC---HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCCTTCCCTHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCccc---ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCCCCCCcHHHHHH
Confidence 4577777777777777777654322 1124577777777777753 477777777776 56677777777
Q ss_pred ------------------CchhhhhccccCCC-cHHHHHHHcC-----CHHHHHHHHc-CCCccccccCCCCChHHHHHH
Q 038923 74 ------------------TDSWVVHMMNRNKE-SALYVAYERG-----RHDVVKQLLN-YPSVSLLEMDDGLTTSLHVAA 128 (140)
Q Consensus 74 ------------------~~~~~~~~~~~~~~-t~l~~A~~~~-----~~~~~~~L~~-~~~~~~~~~~~~~t~~l~~A~ 128 (140)
..+..++.+|..|. ||||+|+..+ ..+++++|++ .|++++.++..|.| |||+|+
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~T-pL~~A~ 162 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLT-ALEFVK 162 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCC-HHHHHH
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCC-HHHHHH
Confidence 12334578899999 9999999944 4569999999 99999999999999 999999
Q ss_pred HcCCHHHHhhh
Q 038923 129 SAGHLGTFANL 139 (140)
Q Consensus 129 ~~g~~~~~~~L 139 (140)
..|+.+++++|
T Consensus 163 ~~~~~~~v~~L 173 (186)
T 3t8k_A 163 RCQKPIALKMM 173 (186)
T ss_dssp TTTCHHHHHHH
T ss_pred HcCCHHHHHHH
Confidence 99999999987
No 65
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=2.4e-27 Score=160.83 Aligned_cols=132 Identities=14% Similarity=0.098 Sum_probs=110.1
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
|+||.|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+++. .+.+|.||
T Consensus 22 t~L~~Aa~~g~~~~v~~Ll~~g~~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~A~~~g~ 96 (364)
T 3ljn_A 22 EKIHVAARKGQTDEVRRLIETGVSP--TIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHLAVMANK 96 (364)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHHHHHcCC
Confidence 6899999999999999999998776 678889999999999999999999999999853 23467777
Q ss_pred --------Cc----hhhhh-----------------ccccCCCcHHHHHHHcC--CHHHHHHHHcCCCccccccCCCCCh
Q 038923 74 --------TD----SWVVH-----------------MMNRNKESALYVAYERG--RHDVVKQLLNYPSVSLLEMDDGLTT 122 (140)
Q Consensus 74 --------~~----~~~~~-----------------~~~~~~~t~l~~A~~~~--~~~~~~~L~~~~~~~~~~~~~~~t~ 122 (140)
.. ....+ ..+..|.||||+|+..| +.+++++|++.|++++..+..|.|
T Consensus 97 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t- 175 (364)
T 3ljn_A 97 TDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADET- 175 (364)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCC-
T ss_pred HHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCC-
Confidence 00 11112 26778889999999998 889999999889888888888888
Q ss_pred HHHHHHHcCCHHHHhhhC
Q 038923 123 SLHVAASAGHLGTFANLV 140 (140)
Q Consensus 123 ~l~~A~~~g~~~~~~~Ll 140 (140)
|||+|+..|+.+++++|+
T Consensus 176 ~L~~A~~~g~~~~v~~Ll 193 (364)
T 3ljn_A 176 PLMRAMEFRNREALDLMM 193 (364)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHH
Confidence 999999999998888874
No 66
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=2.8e-28 Score=160.88 Aligned_cols=133 Identities=14% Similarity=0.046 Sum_probs=116.7
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCC-CCC-------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKF-ETP------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~-~~~------- 73 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|++ ++..+..| .||
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGLDD--SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHc
Confidence 47999999999999999999998876 66788999999999999999999999999988 67888888 688
Q ss_pred ----------Cchhhhhcccc-CCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChH-HHHHHHcCCHHHHhhhC
Q 038923 74 ----------TDSWVVHMMNR-NKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTS-LHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ----------~~~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~-l~~A~~~g~~~~~~~Ll 140 (140)
..+. ...+. .|.||||+|+..|+.+++++|++.|++++.++..|+| | ||+|+..|+.+++++|+
T Consensus 140 ~~~~~v~~Ll~~g~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t-~~L~~A~~~~~~~~v~~Ll 215 (285)
T 3kea_A 140 NDVSIVSYFLSEIP--STFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFI-PDIKLAIDNKDIEMLQALF 215 (285)
T ss_dssp TCHHHHHHHHTTSC--TTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCC-TTHHHHHHHTCHHHHHHHT
T ss_pred CCHHHHHHHHhCCC--ccccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCC-hHHHHHHHcCCHHHHHHHH
Confidence 1111 11222 7889999999999999999999999999999999999 7 99999999999999986
No 67
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=7e-27 Score=161.79 Aligned_cols=134 Identities=22% Similarity=0.138 Sum_probs=122.3
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.++++.|++.+.+. +..+..|.||||+|+..|+.+++++|++++.+ ++..+..|.||
T Consensus 246 ~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g 322 (437)
T 1n11_A 246 VTPLHLAAQEGHAEMVALLLSKQANG--NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYG 322 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSS
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc-CCCCCCCCCCHHHHHHHcC
Confidence 37899999999999999999988776 67788999999999999999999999999988 67888999999
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
..+..++.++..|+||||+|+..|+.+++++|++.|++++.++..|.| |+++|+..|+.+++++|
T Consensus 323 ~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t-~l~~A~~~g~~~~~~~l 396 (437)
T 1n11_A 323 NIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTT-PLAIAKRLGYISVTDVL 396 (437)
T ss_dssp CSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCC-HHHHHHHTTCHHHHHHH
T ss_pred cHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCC-HHHHHHHcCcHHHHHHH
Confidence 234556788899999999999999999999999999999999999999 99999999999998876
No 68
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.95 E-value=4.8e-27 Score=156.14 Aligned_cols=118 Identities=20% Similarity=0.187 Sum_probs=109.5
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhc------CCCCCCcHHHHHHhh---CcHHHHHHHHhhCCcccCCCCCCCCCC
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQT------VPGSSNTILHLASRY---EHEELALEILKLCPEMLAAPNDKFETP 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~------~~~~g~t~l~~A~~~---g~~~~~~~Ll~~~~~~~~~~~~~~~~~ 73 (140)
++|+.|+..|+++.++.|+..+.++ +. .+..|.||||+|+.. |+.+++++|++.|+++
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~--~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv----------- 219 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDF--GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL----------- 219 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT--TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-----------
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcc--cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-----------
Confidence 5699999999999999999988776 33 478899999999997 8999999999999986
Q ss_pred CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.++..|+||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..|+.+++++|+
T Consensus 220 ------n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~T-pL~~A~~~~~~~iv~~Ll 279 (301)
T 2b0o_E 220 ------DAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGET-ALDIARKKHHKECEELLE 279 (301)
T ss_dssp ------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCC-HHHHHHHHTCHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 678899999999999999999999999999999999999999 999999999999999884
No 69
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=4.3e-27 Score=152.78 Aligned_cols=134 Identities=16% Similarity=0.071 Sum_probs=107.1
Q ss_pred CHHHHHHHHc---CCHHHHHHHhhhchHHHhh---------cCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCC
Q 038923 2 DERLFETILK---GDVPNFLNLVHEDEAIIKQ---------TVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDK 69 (140)
Q Consensus 2 ~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~---------~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 69 (140)
.||||.|+.. |+.++++.|++.+...... ..+..|.||||+|+..|+.+++++|++.|+++ +..+..
T Consensus 44 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~ 122 (256)
T 2etb_A 44 KTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACG 122 (256)
T ss_dssp BCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCS
T ss_pred CCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-Cccccc
Confidence 3799999999 9999999999998765210 12367999999999999999999999999984 333222
Q ss_pred CCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHc---CCCccccccCCCCChHHHHHHH--cCCHH-------HHh
Q 038923 70 FETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLN---YPSVSLLEMDDGLTTSLHVAAS--AGHLG-------TFA 137 (140)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~---~~~~~~~~~~~~~t~~l~~A~~--~g~~~-------~~~ 137 (140)
+..+.. ....+..|.||||+|+..|+.+++++|++ .|++++.++..|+| |||+|+. .++.+ +++
T Consensus 123 ~~~~~~---~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~T-pLh~A~~~~~~~~~~~~~~~~iv~ 198 (256)
T 2etb_A 123 RFFQKH---QGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNT-VLHALVMIADNSPENSALVIHMYD 198 (256)
T ss_dssp GGGSCC---SSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCC-HHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred cccccc---ccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCC-HHHHHHHcccCCchhhHHHHHHHH
Confidence 111100 01122349999999999999999999999 99999999999999 9999999 88888 888
Q ss_pred hhC
Q 038923 138 NLV 140 (140)
Q Consensus 138 ~Ll 140 (140)
+|+
T Consensus 199 ~Ll 201 (256)
T 2etb_A 199 GLL 201 (256)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 70
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.95 E-value=4.5e-27 Score=165.48 Aligned_cols=118 Identities=20% Similarity=0.180 Sum_probs=109.7
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcC------CCCCCcHHHHHHh---hCcHHHHHHHHhhCCcccCCCCCCCCCC
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTV------PGSSNTILHLASR---YEHEELALEILKLCPEMLAAPNDKFETP 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~------~~~g~t~l~~A~~---~g~~~~~~~Ll~~~~~~~~~~~~~~~~~ 73 (140)
+.||.|+..|+.+.++.|++.+.++ +.. +..|.||||+||. .|+.+++++|++.|+++
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~--n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v----------- 200 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDF--GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL----------- 200 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCS--SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-----------
T ss_pred HHHHHHHhccCHHHHHHHHhhcccc--cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-----------
Confidence 4699999999999999999998776 333 7789999999966 99999999999999986
Q ss_pred CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 74 TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 74 ~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.+|..|+||||+|+..|+.+++++|+++|++++.++..|.| |||+|+..|+.+++++|+
T Consensus 201 ------n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-pl~~A~~~~~~~~~~~Ll 260 (497)
T 3lvq_E 201 ------DAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGET-ALDIARKKHHKECEELLE 260 (497)
T ss_dssp ------TCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCC-HHHHHHHTTCHHHHHHHH
T ss_pred ------CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 788999999999999999999999999999999999999999 999999999999999884
No 71
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=1.1e-26 Score=152.24 Aligned_cols=135 Identities=18% Similarity=0.104 Sum_probs=116.9
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcC----------CCCCCcHHHHHHhhCcHHHHHHHHhh-CCcccCCCCCCC
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTV----------PGSSNTILHLASRYEHEELALEILKL-CPEMLAAPNDKF 70 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~----------~~~g~t~l~~A~~~g~~~~~~~Ll~~-~~~~~~~~~~~~ 70 (140)
.+|||.|+..|+.+++++|++.+.++ +.. +..|.||||+|+..|+.+++++|++. +.+ ++..+..|
T Consensus 106 ~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~g 182 (285)
T 1wdy_A 106 FTAFMEAAVYGKVKALKFLYKRGANV--NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMG 182 (285)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCT--TCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC-TTCCCTTS
T ss_pred CCHHHHHHHhCCHHHHHHHHHhCCCc--ccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCC
Confidence 36889999999999999988887665 223 67799999999999999999999998 666 78888999
Q ss_pred CCC---------------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHc-CCCccccccCCCCChHHHHHH
Q 038923 71 ETP---------------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLN-YPSVSLLEMDDGLTTSLHVAA 128 (140)
Q Consensus 71 ~~~---------------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~-~~~~~~~~~~~~~t~~l~~A~ 128 (140)
.+| ..+..++.++..|.||||+|+..|+.+++++|++ .|++++.++..|.| |||+|+
T Consensus 183 ~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t-~l~~A~ 261 (285)
T 1wdy_A 183 RNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKT-ALLLAV 261 (285)
T ss_dssp CCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCC-HHHHHH
T ss_pred CCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCc-HHHHHH
Confidence 998 1223356678889999999999999999999998 89999999999999 999999
Q ss_pred HcCCHHHHhhhC
Q 038923 129 SAGHLGTFANLV 140 (140)
Q Consensus 129 ~~g~~~~~~~Ll 140 (140)
..|+.+++++|+
T Consensus 262 ~~~~~~i~~~Ll 273 (285)
T 1wdy_A 262 ELKLKKIAELLC 273 (285)
T ss_dssp HTTCHHHHHHHH
T ss_pred HcCcHHHHHHHH
Confidence 999999999984
No 72
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.94 E-value=1.1e-26 Score=158.40 Aligned_cols=137 Identities=12% Similarity=0.073 Sum_probs=109.2
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchH-HHhhcCCCCCCcHHHHHHhhC---cHHHHHHHHhhCCcccC-------CCCCCCC
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEA-IIKQTVPGSSNTILHLASRYE---HEELALEILKLCPEMLA-------APNDKFE 71 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~-~~~~~~~~~g~t~l~~A~~~g---~~~~~~~Ll~~~~~~~~-------~~~~~~~ 71 (140)
||||.|+..|+.++++.|++.+.. ...+..+..|.||||+|+..+ +.+++++|++.+.++.. ..+..|.
T Consensus 201 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~ 280 (373)
T 2fo1_E 201 SALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGR 280 (373)
T ss_dssp CHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCC
T ss_pred CHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCC
Confidence 577777777777777777776521 122556778888888888887 78888888888887432 3566888
Q ss_pred CC-----------------Cc-hhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCH
Q 038923 72 TP-----------------TD-SWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHL 133 (140)
Q Consensus 72 ~~-----------------~~-~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~ 133 (140)
|| .. +..++.++..|.||||+|+..|+.+++++|++.|++++.++..|.| |||+|+..|+.
T Consensus 281 t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t-~l~~A~~~g~~ 359 (373)
T 2fo1_E 281 TALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHT-ARQLAQANNHH 359 (373)
T ss_dssp CTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCC-HHHHHHHTTCH
T ss_pred CHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCC-HHHHHHHcCCH
Confidence 88 12 2556778889999999999999999999999999999999999999 99999999999
Q ss_pred HHHhhhC
Q 038923 134 GTFANLV 140 (140)
Q Consensus 134 ~~~~~Ll 140 (140)
+++++|+
T Consensus 360 ~iv~~Ll 366 (373)
T 2fo1_E 360 NIVDIFD 366 (373)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 73
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.94 E-value=8.9e-27 Score=158.37 Aligned_cols=118 Identities=14% Similarity=0.067 Sum_probs=110.7
Q ss_pred HHHHHHHHc-CCHHHHHHHhhhchHHHhhcCC--CCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhh
Q 038923 3 ERLFETILK-GDVPNFLNLVHEDEAIIKQTVP--GSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVV 79 (140)
Q Consensus 3 ~~l~~a~~~-g~~~~~~~ll~~~~~~~~~~~~--~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 79 (140)
++||.|+.. |+++.++.|++.+.++ +..+ ..|.||||+|+..|+.+++++|+++|+++
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~~Gadv--n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv----------------- 261 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALAHGADV--NWVNGGQDNATPLIQATAANSLLACEFLLQNGANV----------------- 261 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHTTCCT--TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------
T ss_pred cHHHHHHHccCCHHHHHHHHHcCCCC--CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-----------------
Confidence 589999999 9999999999998877 4555 78999999999999999999999999986
Q ss_pred hccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 80 HMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 80 ~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+..+..|+||||+|+..|+.+++++|+++|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 262 n~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~T-pL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 262 NQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRD-PLTIAMETANADIVTLLR 321 (368)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCC-HHHHHHHCCCHHHHHHHH
Confidence 788999999999999999999999999999999999999999 999999999999999874
No 74
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=1.6e-26 Score=151.41 Aligned_cols=135 Identities=16% Similarity=0.081 Sum_probs=107.0
Q ss_pred CHHHHHHHHc---CCHHHHHHHhhhchHHH-----hhc----CCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCC
Q 038923 2 DERLFETILK---GDVPNFLNLVHEDEAII-----KQT----VPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDK 69 (140)
Q Consensus 2 ~~~l~~a~~~---g~~~~~~~ll~~~~~~~-----~~~----~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 69 (140)
.||||.|+.. |+.++++.|++.+++.. .+. .+..|.||||+|+..|+.+++++|++.|+++ +..+..
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~ 133 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANG 133 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCS
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-Cccccc
Confidence 4799999987 99999999999976521 122 4568999999999999999999999999984 222211
Q ss_pred CCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHc---CCCccccccCCCCChHHHHHHHcCC---------HHHHh
Q 038923 70 FETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLN---YPSVSLLEMDDGLTTSLHVAASAGH---------LGTFA 137 (140)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~---~~~~~~~~~~~~~t~~l~~A~~~g~---------~~~~~ 137 (140)
+.... ......+..|.||||+|+..|+.+++++|++ .|++++.++..|+| |||+|+..|+ .++++
T Consensus 134 ~~~~~--~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~t-pLh~A~~~~~~~~~~~~~~~~~v~ 210 (273)
T 2pnn_A 134 DFFKK--TKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNT-VLHALVEVADNTVDNTKFVTSMYN 210 (273)
T ss_dssp GGGSS--CSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCC-HHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred ccccc--ccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCc-HHHHHHHccCcchhHHHHHHHHHH
Confidence 10000 0011223479999999999999999999999 99999999999999 9999999998 78888
Q ss_pred hhC
Q 038923 138 NLV 140 (140)
Q Consensus 138 ~Ll 140 (140)
+|+
T Consensus 211 ~Ll 213 (273)
T 2pnn_A 211 EIL 213 (273)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
No 75
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=1.8e-26 Score=155.10 Aligned_cols=137 Identities=18% Similarity=0.105 Sum_probs=114.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHh--------hcCCCCCCcHHHHHHhhCcHHHHHHHHhh-CCcccCCCCCCCCC
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIK--------QTVPGSSNTILHLASRYEHEELALEILKL-CPEMLAAPNDKFET 72 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~--------~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~-~~~~~~~~~~~~~~ 72 (140)
.||++.|+..|+.++++.+++.+..+.. ...+..|.||||+|+..|+.+++++|+++ |++ ++..+..|.+
T Consensus 126 ~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad-~n~~d~~g~t 204 (337)
T 4g8k_A 126 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRN 204 (337)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC-TTCCCTTSCC
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC-cCccCCCCCc
Confidence 3689999999999999999998765411 22445689999999999999999999975 666 7888888888
Q ss_pred C---------------------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHc-CCCccccccCCCCChHHHHHHHc
Q 038923 73 P---------------------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLN-YPSVSLLEMDDGLTTSLHVAASA 130 (140)
Q Consensus 73 ~---------------------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~-~~~~~~~~~~~~~t~~l~~A~~~ 130 (140)
+ ..+..++.++..|+||||+|+..|+.++++.|+. .|++++.++..|+| |||+|+..
T Consensus 205 ~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~T-pL~~A~~~ 283 (337)
T 4g8k_A 205 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKT-ALLLAVEL 283 (337)
T ss_dssp HHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCB-HHHHHHHT
T ss_pred HHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCC-HHHHHHHc
Confidence 7 1233456778889999999999999999999986 47899999999999 99999999
Q ss_pred CCHHHHhhhC
Q 038923 131 GHLGTFANLV 140 (140)
Q Consensus 131 g~~~~~~~Ll 140 (140)
|+.+++++|+
T Consensus 284 g~~~iv~~Ll 293 (337)
T 4g8k_A 284 KLKKIAELLC 293 (337)
T ss_dssp TCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 9999999885
No 76
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=2e-26 Score=154.96 Aligned_cols=119 Identities=22% Similarity=0.235 Sum_probs=109.1
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
++|+.|++.|+.+.++.++...+.. .+..+..|.||||+|+..|+.+++++|++.|.++ +..
T Consensus 26 ~~L~~A~~~g~~~~v~~ll~~~~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-----------------~~~ 87 (351)
T 3utm_A 26 DELLEAARSGNEEKLMALLTPLNVN-CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-----------------HAK 87 (351)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTT-CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TCC
T ss_pred hhHHHHHHcCCHHHHHHHHHhcCCC-cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------Ccc
Confidence 6899999999999999999874332 2567889999999999999999999999999986 678
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 88 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 144 (351)
T 3utm_A 88 DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFT-PLHEAASKNRVEVCSLLL 144 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHH
T ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 889999999999999999999999999999999999999 999999999999999884
No 77
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=6.1e-27 Score=152.29 Aligned_cols=135 Identities=15% Similarity=0.006 Sum_probs=105.6
Q ss_pred CHHHHHHH---HcCCHHHHHHHhhhchHHH---------hhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCC
Q 038923 2 DERLFETI---LKGDVPNFLNLVHEDEAII---------KQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDK 69 (140)
Q Consensus 2 ~~~l~~a~---~~g~~~~~~~ll~~~~~~~---------~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 69 (140)
.||||.|+ +.|+.++++.|++.+.... .+..+..|.||||+|+..|+.+++++|++.|+++ +..+..
T Consensus 47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~ 125 (260)
T 3jxi_A 47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARG 125 (260)
T ss_dssp CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEE
T ss_pred CcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-Cccccc
Confidence 37999999 6799999999999876521 1223348999999999999999999999999985 222211
Q ss_pred CCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHc---CCCccccccCCCCChHHHHHHHcCC---------HHHHh
Q 038923 70 FETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLN---YPSVSLLEMDDGLTTSLHVAASAGH---------LGTFA 137 (140)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~---~~~~~~~~~~~~~t~~l~~A~~~g~---------~~~~~ 137 (140)
+... +......+..|+||||+|+..|+.+++++|++ .|++++.++..|+| |||+|+..|+ .++++
T Consensus 126 ~~~~--~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~T-pLh~A~~~~~~~~~~~~~~~~~v~ 202 (260)
T 3jxi_A 126 RFFQ--PKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNT-VLHALVAIADNTRENTKFVTKMYD 202 (260)
T ss_dssp CCCS--SSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCC-HHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred cccC--cccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCc-HHHHHHHhccCchhHHHHHHHHHH
Confidence 0000 00001122679999999999999999999999 99999999999999 9999999888 68888
Q ss_pred hhC
Q 038923 138 NLV 140 (140)
Q Consensus 138 ~Ll 140 (140)
+|+
T Consensus 203 ~Ll 205 (260)
T 3jxi_A 203 LLL 205 (260)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
No 78
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=5.2e-27 Score=155.21 Aligned_cols=117 Identities=16% Similarity=0.132 Sum_probs=109.9
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMM 82 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
++|+.|+..|+.+.++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|+++ +..
T Consensus 42 t~l~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-----------------~~~ 102 (299)
T 1s70_B 42 AVFLAACSSGDTEEVLRLLERGADI--NYANVDGLTALHQACIDDNVDMVKFLVENGANI-----------------NQP 102 (299)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHCCCT--TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-----------------TCC
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-----------------CCC
Confidence 6899999999999999999998776 667889999999999999999999999999986 678
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 83 NRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 83 ~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
+..|+||||+|+..|+.+++++|++.|++++..+..|.| |||+|+..++.++++.+
T Consensus 103 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-~l~~A~~~~~~~~~~~l 158 (299)
T 1s70_B 103 DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDT-PLDIAEEEAMEELLQNE 158 (299)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHCCSHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCC-HHHHHHhcchHHHHHHH
Confidence 889999999999999999999999999999999999999 99999999999988765
No 79
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.8e-26 Score=128.66 Aligned_cols=88 Identities=32% Similarity=0.400 Sum_probs=82.7
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCcccc
Q 038923 35 SSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLL 114 (140)
Q Consensus 35 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~ 114 (140)
+|+||||+|+..|+.+++++|++.+.++ +.++..|+||||+|+..|+.+++++|++.|++++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 63 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-----------------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-----------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-----------------cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 4899999999999999999999999986 67889999999999999999999999999999999
Q ss_pred ccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 115 EMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 115 ~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
++..|.| |||+|+..|+.+++++|+
T Consensus 64 ~d~~g~t-~l~~A~~~~~~~~~~~Ll 88 (93)
T 1n0q_A 64 KDKNGRT-PLHLAARNGHLEVVKLLL 88 (93)
T ss_dssp CCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred cCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 9999999 999999999999999884
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=3.4e-27 Score=152.18 Aligned_cols=118 Identities=19% Similarity=0.097 Sum_probs=83.4
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.||||.|++.|+.+.++.|++.+.+. + .+..|.||||+|+..|+.+++++|++.++++ +.
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~--~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-----------------~~ 65 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRV--K-FNPLPLALLLDSSLEGEFDLVQRIIYEVDDP-----------------SL 65 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-----------------CC
T ss_pred cccCchhhhhhhHHHHHHHhccCCCc--c-cCchhhHHHHHHHHcCCHHHHHHHHHcCCCC-----------------CC
Confidence 47999999999999999999998877 3 2367899999999999999999999999975 67
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.+..|.||||+|+..|+.+++++|++.|++++.++..|+| |||+|+..|+.+++++|+
T Consensus 66 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t-pL~~A~~~~~~~~v~~Ll 123 (239)
T 1ycs_B 66 PNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWT-PLHCAASCNNVQVCKFLV 123 (239)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 8899999999999999999999999999999999999999 999999999999999884
No 81
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.94 E-value=8.1e-27 Score=159.00 Aligned_cols=135 Identities=18% Similarity=0.141 Sum_probs=117.9
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhC---CcccCCCCCCCCCC-----
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLC---PEMLAAPNDKFETP----- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~---~~~~~~~~~~~~~~----- 73 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+ .+ ++..+..|.||
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGADP--TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD-IEELDRNGMTALMIVA 243 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT-TSCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCCC--cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC-hhhcCCCCCCHHHHHH
Confidence 47999999999999999999998877 678889999999999999999999999987 34 67888999998
Q ss_pred --C---c----------hhhh--------hccccCCCcHHHHHHHcCCHHHHHHHHcCC-CccccccCCCCChHHHHHHH
Q 038923 74 --T---D----------SWVV--------HMMNRNKESALYVAYERGRHDVVKQLLNYP-SVSLLEMDDGLTTSLHVAAS 129 (140)
Q Consensus 74 --~---~----------~~~~--------~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~-~~~~~~~~~~~t~~l~~A~~ 129 (140)
. . +..+ +..+..|.||||+|+..|+.+++++|++.+ ++++..+..|.| |||+|+.
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~T-pL~~A~~ 322 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKT-PIMLAAQ 322 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCC-HHHHHHH
T ss_pred HhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCC-HHHHHHH
Confidence 1 0 1111 124568999999999999999999999765 999999999999 9999999
Q ss_pred cCCHHHHhhhC
Q 038923 130 AGHLGTFANLV 140 (140)
Q Consensus 130 ~g~~~~~~~Ll 140 (140)
.|+.+++++|+
T Consensus 323 ~g~~~iv~~Ll 333 (373)
T 2fo1_E 323 EGRIEVVMYLI 333 (373)
T ss_dssp HTCHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 99999999984
No 82
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=5.7e-26 Score=145.60 Aligned_cols=123 Identities=17% Similarity=0.102 Sum_probs=69.8
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP--------- 73 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~--------- 73 (140)
++|+.|+..|+.+.+++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.+.....+..|.+|
T Consensus 11 ~~l~~A~~~g~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 11 WDIVKATQYGIYERCRELVEAGYDV--RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88 (240)
T ss_dssp CCHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC
T ss_pred hHHHHHHHcCChHHHHHHHHcCCCc--CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC
Confidence 4567777777777777777766554 44556677777777777777777777777666444444445555
Q ss_pred --------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHH
Q 038923 74 --------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAA 128 (140)
Q Consensus 74 --------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~ 128 (140)
..+..++..+..|.||||+|+..|+.+++++|++.|++++..+..|.| |||+|+
T Consensus 89 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t-~l~~a~ 150 (240)
T 3eu9_A 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMT-PLMWAA 150 (240)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHH
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCc-HHHHHH
Confidence 111222334445555555555555555555555555554444444444 444444
No 83
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=3.8e-26 Score=153.30 Aligned_cols=131 Identities=15% Similarity=0.065 Sum_probs=89.0
Q ss_pred HHHHHcCCHHHHHHHhhhchHHHhhc-CCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-------Cc--
Q 038923 6 FETILKGDVPNFLNLVHEDEAIIKQT-VPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------TD-- 75 (140)
Q Consensus 6 ~~a~~~g~~~~~~~ll~~~~~~~~~~-~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------~~-- 75 (140)
|.|+..+..+.++.|++.+.++ +. .+..|.||||+|+..|+.+++++|+++|++ ++.+|..|.|| ..
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~dv--n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~ 178 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLNL--NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNY 178 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCCS--CSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHH
T ss_pred HHHHHhhHHHHHHHHHhcCCCc--ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccc
Confidence 4444445555555555554444 33 455556666666666666666666665555 34555555555 00
Q ss_pred ------------hhhhhccccCCCcHHHHHHH----cCCHHHHHHHHcCCC-----------------------------
Q 038923 76 ------------SWVVHMMNRNKESALYVAYE----RGRHDVVKQLLNYPS----------------------------- 110 (140)
Q Consensus 76 ------------~~~~~~~~~~~~t~l~~A~~----~~~~~~~~~L~~~~~----------------------------- 110 (140)
...++.++..|+||||+|+. .|+.+++++|++.+.
T Consensus 179 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g 258 (327)
T 1sw6_A 179 DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGER 258 (327)
T ss_dssp HTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred cHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccC
Confidence 02247788999999999999 899999999986632
Q ss_pred ----------------ccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 111 ----------------VSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 111 ----------------~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+++.++..|+| |||+|+..|+.+++++|+
T Consensus 259 ~t~L~~a~~~~~Ll~~~~n~~d~~G~T-pLh~A~~~g~~~~v~~Ll 303 (327)
T 1sw6_A 259 KDSILENLDLKWIIANMLNAQDSNGDT-CLNIAARLGNISIVDALL 303 (327)
T ss_dssp -CHHHHHCSHHHHHHHTTTCCCTTSCC-HHHHHHHHCCHHHHHHHH
T ss_pred CChhHHHHHHHHHHHhCCCCCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 47778888999 999999999999999985
No 84
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.93 E-value=2.4e-25 Score=136.74 Aligned_cols=111 Identities=19% Similarity=0.194 Sum_probs=88.1
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|+||||+|+..|+.+++++|++.|++ ++.+|.+|.||
T Consensus 38 ~t~l~~a~~~~~~~~~~~ll~~gad~--~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g 114 (169)
T 4gpm_A 38 RTPLHHAAENGHKEVVKLLISKGADV--NAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENG 114 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccch--hhhccCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcC
Confidence 36888888888888888888887776 66778888888888888888888888888887 67788888888
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccc
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLE 115 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~ 115 (140)
..+..++.++..|+|||++|+..|+.+++++|++.|++++.-
T Consensus 115 ~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 115 HKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEHH 165 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-------
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCCC
Confidence 234456788999999999999999999999999999998643
No 85
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.92 E-value=6.7e-25 Score=122.28 Aligned_cols=91 Identities=23% Similarity=0.279 Sum_probs=85.2
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|+||||+|+..|+.+++++|++.|+++ +.
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~--n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-----------------~~ 63 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADV--NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-----------------NA 63 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TC
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------Cc
Confidence 47999999999999999999998776 678899999999999999999999999999986 67
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCc
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSV 111 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~ 111 (140)
++..|+||||+|+..|+.+++++|++.|++
T Consensus 64 ~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 889999999999999999999999999874
No 86
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=2.6e-26 Score=156.52 Aligned_cols=122 Identities=17% Similarity=0.177 Sum_probs=99.4
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHH-HhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAI-IKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~-~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
||||.|++.|+.+++++|++.+... .....+..|.||||+|+..|+.+++++|+++|++.. .. +.
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~------------~~--~i 159 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI------------MA--MI 159 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTH------------HH--HH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcc------------cc--cc
Confidence 7999999999999999999987521 001234567899999999999999999999997420 00 12
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCcccc--ccCCCCChHHHHHH-HcCCHHHHhhhC
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLL--EMDDGLTTSLHVAA-SAGHLGTFANLV 140 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~--~~~~~~t~~l~~A~-~~g~~~~~~~Ll 140 (140)
.+.+ +||||+|+..|+.+++++|++.|++++. .+..|.| |||+|+ ..|+.+++++|+
T Consensus 160 ~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~T-pL~~Aa~~~G~~eiv~~Ll 219 (376)
T 2aja_A 160 QAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYY-AFRWAAVGRGHHNVINFLL 219 (376)
T ss_dssp SHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHH-HHHHHHSTTCCHHHHHHHT
T ss_pred CCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCC-HHHHHHHHCCCHHHHHHHH
Confidence 2223 8999999999999999999999999887 7878899 999999 999999999986
No 87
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.92 E-value=7e-25 Score=126.58 Aligned_cols=102 Identities=18% Similarity=0.217 Sum_probs=87.3
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.++||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.++++ +.
T Consensus 10 ~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-----------------~~ 70 (115)
T 2l6b_A 10 NTPLHNAAKNGHAEEVKKLLSKGADV--NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-----------------NA 70 (115)
T ss_dssp CCHHHHHHHHTCHHHHHHHTTTTCCS--SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-----------------TC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-----------------cc
Confidence 46899999999999999999887765 567788999999999999999999999988875 67
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChH
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTS 123 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~ 123 (140)
++..|.||||+|+..|+.+++++|++.|++++..+..+.+ |
T Consensus 71 ~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~-~ 111 (115)
T 2l6b_A 71 RSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSH-H 111 (115)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccc-c
Confidence 7888899999999999999999999999999988888877 5
No 88
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.91 E-value=1.8e-24 Score=135.07 Aligned_cols=111 Identities=16% Similarity=0.073 Sum_probs=100.2
Q ss_pred HhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-----------------CchhhhhccccCCCcHH
Q 038923 28 IKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-----------------TDSWVVHMMNRNKESAL 90 (140)
Q Consensus 28 ~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~t~l 90 (140)
..+..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.|| ..+..++..+..|.|||
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 105 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPL 105 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 3466889999999999999999999999999987 67888899999 23344677888999999
Q ss_pred HHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 91 YVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 91 ~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
|+|+..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 154 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLEHGANVNDRNLEGET-PLIVASKYGRSEIVKKLL 154 (192)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCCCTTCCC-HHHHHHHHTCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999999884
No 89
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=8.4e-26 Score=140.77 Aligned_cols=103 Identities=9% Similarity=-0.024 Sum_probs=69.4
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC---------------------CchhhhhccccCCCcHHHHH
Q 038923 35 SSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP---------------------TDSWVVHMMNRNKESALYVA 93 (140)
Q Consensus 35 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~t~l~~A 93 (140)
+++++|+.|++.|+.+.++.++..+... ..+..|.|| ..++.++.++..|+||||+|
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred ccccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 3568999999999999999999877542 112456666 12334566667777777777
Q ss_pred HHcCC------HHHHHHHHcCCCccccccCCCCChHHHHHHHcCC-----HHHHhhh
Q 038923 94 YERGR------HDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGH-----LGTFANL 139 (140)
Q Consensus 94 ~~~~~------~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~-----~~~~~~L 139 (140)
+..|+ .+++++|++.|++++.++..|.|||||+|+..+. .+++++|
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~L 139 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLI 139 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHH
Confidence 77665 4567777777777777777777227777776433 3455554
No 90
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=3.2e-25 Score=148.80 Aligned_cols=127 Identities=15% Similarity=0.129 Sum_probs=107.7
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCc---HHHHHHHHhhCCcccCCCCCCCCCCCchh-
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEH---EELALEILKLCPEMLAAPNDKFETPTDSW- 77 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~---~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~- 77 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|+||||+|+..|+ .++++.|++.+...++.+|..|.||...+
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~Gad~--n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 209 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKHGSNR--LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHII 209 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT--TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHH
Confidence 47999999999999999999998877 6788889999999999888 67777777776434677888888881100
Q ss_pred -----------------------------------------------------------------hhhccccCCCcHHHH
Q 038923 78 -----------------------------------------------------------------VVHMMNRNKESALYV 92 (140)
Q Consensus 78 -----------------------------------------------------------------~~~~~~~~~~t~l~~ 92 (140)
.++.++..|+||||+
T Consensus 210 ~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~ 289 (327)
T 1sw6_A 210 ITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNI 289 (327)
T ss_dssp HHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHH
T ss_pred HHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 367788999999999
Q ss_pred HHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcC
Q 038923 93 AYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAG 131 (140)
Q Consensus 93 A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g 131 (140)
|+..|+.+++++|+++|++++.++..|+| |||+|++.|
T Consensus 290 A~~~g~~~~v~~Ll~~Gad~~~~d~~G~T-pL~~A~~~g 327 (327)
T 1sw6_A 290 AARLGNISIVDALLDYGADPFIANKSGLR-PVDFGAGLE 327 (327)
T ss_dssp HHHHCCHHHHHHHHHTTCCTTCCCTTSCC-GGGGTCC--
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCC-HHHHHHhcC
Confidence 99999999999999999999999999999 999998765
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=5.7e-24 Score=126.23 Aligned_cols=92 Identities=22% Similarity=0.176 Sum_probs=86.8
Q ss_pred cCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCC
Q 038923 31 TVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPS 110 (140)
Q Consensus 31 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~ 110 (140)
..+..|.||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..|+.+++++|++.|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-----------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 67 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-----------------NVKDHAGWTPLHEACNHGHLKVVELLLQHKA 67 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-----------------CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 46789999999999999999999999999886 6788899999999999999999999999999
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 111 VSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 111 ~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+++.++..|.| |||+|+..|+.+++++|+
T Consensus 68 ~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 96 (137)
T 3c5r_A 68 LVNTTGYQNDS-PLHDAAKNGHVDIVKLLL 96 (137)
T ss_dssp CTTCCCGGGCC-HHHHHHHTTCHHHHHHHH
T ss_pred cccCcCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 99999999999 999999999999999884
No 92
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.91 E-value=5.7e-24 Score=121.99 Aligned_cols=91 Identities=18% Similarity=0.167 Sum_probs=84.4
Q ss_pred cCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCC
Q 038923 31 TVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPS 110 (140)
Q Consensus 31 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~ 110 (140)
..+.+|.|+||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.|+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-----------------~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga 81 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADV-----------------AAKDKNGSTPLHLAARNGHLEVVKLLLEAGA 81 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-----------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-----------------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 35678999999999999999999999999886 6788999999999999999999999999999
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHhhh
Q 038923 111 VSLLEMDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 111 ~~~~~~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
+++.++..|.| |||+|+..|+.+++++|
T Consensus 82 ~~~~~d~~g~t-pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 82 DVXAQDKFGKT-AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CTTCCCTTSCC-HHHHHHHHTCHHHHHHH
T ss_pred CccccccCCCc-HHHHHHHcCCHHHHHHh
Confidence 99999999999 99999999999999987
No 93
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.90 E-value=4.7e-24 Score=123.07 Aligned_cols=92 Identities=25% Similarity=0.262 Sum_probs=86.9
Q ss_pred cCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCC
Q 038923 31 TVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPS 110 (140)
Q Consensus 31 ~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~ 110 (140)
..|..|.||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..|+.+++++|++.|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-----------------~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 66 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-----------------NARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-----------------SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 46789999999999999999999999999885 6788899999999999999999999999999
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 111 VSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 111 ~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+++.++..|.| |||+|+..|+.+++++|+
T Consensus 67 ~~~~~d~~g~t-pl~~A~~~~~~~~~~~Ll 95 (115)
T 2l6b_A 67 DVNARSKDGNT-PEHLAKKNGHHEIVKLLD 95 (115)
T ss_dssp CTTCCCTTCCC-TTHHHHTTTCHHHHHHHH
T ss_pred CCcccCCCCCC-HHHHHHHCCCHHHHHHHH
Confidence 99999999999 999999999999999884
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=1.5e-23 Score=122.38 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=83.1
Q ss_pred CCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCcc
Q 038923 33 PGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVS 112 (140)
Q Consensus 33 ~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~ 112 (140)
+..|.||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..|+.+++++|++.|+++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-----------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 66 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-----------------NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 66 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-----------------TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-----------------CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 457889999999999999999999999875 678889999999999999999999999999999
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 113 LLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 113 ~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.++..|+| |||+|+..|+.+++++|+
T Consensus 67 ~~~d~~g~t-pL~~A~~~~~~~~v~~Ll 93 (123)
T 3aaa_C 67 NAPDKHHIT-PLLSAVYEGHVSCVKLLL 93 (123)
T ss_dssp TCCCTTSCC-HHHHHHHHTCHHHHHHHH
T ss_pred CcCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 999999999 999999999999999884
No 95
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.90 E-value=8.5e-24 Score=129.81 Aligned_cols=118 Identities=12% Similarity=-0.029 Sum_probs=100.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC--------
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-------- 73 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-------- 73 (140)
.||||.|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 113 (172)
T 3v30_A 37 FTPLIWASAFGEIETVRFLLEWGADP--HILAKERESALSLASTGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGN 113 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCc--hhhcccCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcC
Confidence 47999999999999999999998776 66788999999999999999999999999998 68889999999
Q ss_pred ---------CchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChH
Q 038923 74 ---------TDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTS 123 (140)
Q Consensus 74 ---------~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~ 123 (140)
..+..++.++..|.||+++|+..|+.+++++|++++++....+..+.| |
T Consensus 114 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~-p 171 (172)
T 3v30_A 114 HVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPAD-P 171 (172)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC--------
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCC-C
Confidence 234456778899999999999999999999999999988888877777 5
No 96
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=8.1e-24 Score=125.52 Aligned_cols=92 Identities=23% Similarity=0.181 Sum_probs=86.5
Q ss_pred hcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCC
Q 038923 30 QTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYP 109 (140)
Q Consensus 30 ~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~ 109 (140)
+..+..|.||||+|+..|+.+++++|++.+.++ +.++..|+||||+|+. |+.+++++|++.|
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g 67 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGADP-----------------NALNRFGRRPIQVMMM-GSAQVAELLLLHG 67 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TCCCTTCCTTTTTSTT-SCHHHHHHHHHHT
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-----------------CCcCCCCCCHHHHHHc-CCHHHHHHHHHCC
Confidence 567789999999999999999999999999886 6788899999999999 9999999999999
Q ss_pred CccccccCC-CCChHHHHHHHcCCHHHHhhhC
Q 038923 110 SVSLLEMDD-GLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 110 ~~~~~~~~~-~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
++++.++.. |.| |||+|+..|+.+++++|+
T Consensus 68 ~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 98 (136)
T 1d9s_A 68 AEPNCADPATLTR-PVHDAAREGFLDTLVVLH 98 (136)
T ss_dssp CCSSCCBTTTTBC-HHHHHHHHTCHHHHHHHH
T ss_pred CCCCCcCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 999999998 899 999999999999999884
No 97
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.4e-23 Score=134.53 Aligned_cols=106 Identities=18% Similarity=0.068 Sum_probs=87.4
Q ss_pred HHHHhhhchHHH-hhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHH
Q 038923 17 FLNLVHEDEAII-KQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYE 95 (140)
Q Consensus 17 ~~~ll~~~~~~~-~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~ 95 (140)
++.|++.+..+. .+..+..+.||||+|+..|+.+++++|++.|.++ +..+..|+||||+|+.
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-----------------~~~d~~g~tpLh~A~~ 63 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-----------------SQPNEEGITALHNAIC 63 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-----------------TCCCTTSCCHHHHHHH
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-----------------CCCCCCCCCHHHHHHH
Confidence 356677665542 1234466789999999999999999999999986 6788999999999999
Q ss_pred cCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 96 RGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 96 ~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.|+.+++++|++.|++++..+..|+| |||+|+..|+.+++++|+
T Consensus 64 ~g~~~~v~~Ll~~ga~~n~~d~~g~t-pLh~A~~~g~~~~v~~Ll 107 (229)
T 2vge_A 64 GANYSIVDFLITAGANVNSPDSHGWT-PLHCAASCNDTVICMALV 107 (229)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999999 999999999999999884
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.89 E-value=7e-24 Score=140.92 Aligned_cols=105 Identities=19% Similarity=0.133 Sum_probs=90.1
Q ss_pred HHHHHHHHc---CCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhh
Q 038923 3 ERLFETILK---GDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVV 79 (140)
Q Consensus 3 ~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 79 (140)
||||.|+.. |+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.|+++
T Consensus 192 t~Lh~A~~~~~~~~~~iv~~Ll~~gadv--n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~----------------- 252 (301)
T 2b0o_E 192 LVLHLAVKVANQASLPLVDFIIQNGGHL--DAKAADGNTALHYAALYNQPDCLKLLLKGRALV----------------- 252 (301)
T ss_dssp CHHHHHHHTCCTTTHHHHHHHHHHSSCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC-----------------
T ss_pred cHHHHHHHhcccCcHHHHHHHHhcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------
Confidence 689999997 8999999999998877 678899999999999999999999999999986
Q ss_pred hccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCH
Q 038923 80 HMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHL 133 (140)
Q Consensus 80 ~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~ 133 (140)
+.+|..|.|||++|+..|+.+++++|++.|++ .|.| |||+|+..|+.
T Consensus 253 ~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~t-pLh~A~~~g~~ 299 (301)
T 2b0o_E 253 GTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAF-PLHVDYSWVIS 299 (301)
T ss_dssp SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSS-CCC--------
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCC-hhHHHHhcCCc
Confidence 68899999999999999999999999988765 5788 99999998874
No 99
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.89 E-value=3.4e-23 Score=126.56 Aligned_cols=104 Identities=19% Similarity=0.158 Sum_probs=93.8
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-----------------CchhhhhccccCCCcHHHHHHHcC
Q 038923 35 SSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-----------------TDSWVVHMMNRNKESALYVAYERG 97 (140)
Q Consensus 35 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~t~l~~A~~~~ 97 (140)
.|.||||+|+..|+.+++++|++.+.+ .+..|..|.|| ..+..++..+..|.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 578999999999999999999999987 78889999999 233445677888999999999999
Q ss_pred CHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 98 RHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 98 ~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 122 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGT-PLLYAVHGNHVKCVKMLL 122 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999 999999999999999874
No 100
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=1.4e-23 Score=127.15 Aligned_cols=104 Identities=12% Similarity=0.022 Sum_probs=81.5
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCc-HHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhh
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNT-ILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVH 80 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t-~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 80 (140)
.||||.|+ .|+.++++.|++.+.++ +..+..|.| |||+|+..|+.+++++|++.|+++ +
T Consensus 46 ~t~L~~A~-~~~~~~v~~Ll~~g~~~--~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~-----------------~ 105 (156)
T 1bi7_B 46 RRPIQVMM-MGSARVAELLLLHGAEP--NCADPATLTRPVHDAAREGFLDTLVVLHRAGARL-----------------D 105 (156)
T ss_dssp CCTTTSSC-TTCHHHHHHHHTTTCCC--CCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS-----------------S
T ss_pred CCHHHHHH-cCCHHHHHHHHHcCCCC--CCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC-----------------c
Confidence 36889885 99999999999998776 678889999 999999999999999999999986 6
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccccCCCCChHHHH
Q 038923 81 MMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHV 126 (140)
Q Consensus 81 ~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~ 126 (140)
.++..|+||||+|+..|+.+++++|+++|++++.++..|.| |.+-
T Consensus 106 ~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-~~~~ 150 (156)
T 1bi7_B 106 VRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARID-AAEG 150 (156)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred ccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCc-cccc
Confidence 78899999999999999999999999999999999999998 8653
No 101
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.89 E-value=4.4e-23 Score=122.31 Aligned_cols=91 Identities=22% Similarity=0.221 Sum_probs=84.3
Q ss_pred CCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCc
Q 038923 32 VPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSV 111 (140)
Q Consensus 32 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~ 111 (140)
....+.||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..|+.+++++|++.|++
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-----------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 72 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADV-----------------NAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-----------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCC-----------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3456889999999999999999999999886 67888999999999999999999999999999
Q ss_pred cccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 112 SLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 112 ~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
++..+..|.| |||+|+..|+.+++++|+
T Consensus 73 ~~~~d~~g~t-~L~~A~~~~~~~~v~~Ll 100 (136)
T 2jab_A 73 VNAVDAIGFT-PLHLAAFIGHLEIAEVLL 100 (136)
T ss_dssp TTCCCTTCCC-HHHHHHHHTCHHHHHHHH
T ss_pred CCcCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 9999999999 999999999999999884
No 102
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.88 E-value=1.1e-22 Score=124.64 Aligned_cols=107 Identities=21% Similarity=0.179 Sum_probs=94.2
Q ss_pred CCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-----------------CchhhhhccccCCCcHHHHHH
Q 038923 32 VPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-----------------TDSWVVHMMNRNKESALYVAY 94 (140)
Q Consensus 32 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~t~l~~A~ 94 (140)
....+.++|+.|+..|+.+++++|++.+.+ ++..+..|.|| ..+..++..+..|.||||+|+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 345678999999999999999999999988 67888999999 233446777888999999999
Q ss_pred HcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 95 ERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 95 ~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..|+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 133 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHT-PLHLAAMFGHLEIVEVLL 133 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999999 999999999999999874
No 103
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=3.1e-22 Score=116.68 Aligned_cols=88 Identities=32% Similarity=0.400 Sum_probs=83.2
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCcccc
Q 038923 35 SSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLL 114 (140)
Q Consensus 35 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~ 114 (140)
+|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-----------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 63 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-----------------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-----------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-----------------CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc
Confidence 4899999999999999999999999875 67788999999999999999999999999999999
Q ss_pred ccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 115 EMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 115 ~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.+..|.| |||+|+..|+.+++++|+
T Consensus 64 ~~~~g~t-~l~~A~~~~~~~~~~~Ll 88 (126)
T 1n0r_A 64 KDKNGRT-PLHLAARNGHLEVVKLLL 88 (126)
T ss_dssp CCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred cCCCCCc-HHHHHHHcChHHHHHHHH
Confidence 9999999 999999999999999874
No 104
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.88 E-value=1.1e-22 Score=123.55 Aligned_cols=104 Identities=23% Similarity=0.189 Sum_probs=93.8
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC----------------CchhhhhccccCCCcHHHHHHHcCC
Q 038923 35 SSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP----------------TDSWVVHMMNRNKESALYVAYERGR 98 (140)
Q Consensus 35 ~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~t~l~~A~~~~~ 98 (140)
...||||+|+..|+.+++++|++.+.+ ++..+..|.|| ..+..++.++..|+||||+|+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCCSSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC-ccccCccCccHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 467999999999999999999999987 68888999998 2234456778899999999999999
Q ss_pred HHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 99 HDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 99 ~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.+++++|++.|++++.++..|.| |||+|+..|+.+++++|+
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 123 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNL-PLHLAAKEGHLRVVEFLV 123 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999 999999999999999884
No 105
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=1.3e-22 Score=122.65 Aligned_cols=104 Identities=17% Similarity=0.075 Sum_probs=93.3
Q ss_pred CCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC----------------CchhhhhccccCCCcHHHHHHHcCCH
Q 038923 36 SNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP----------------TDSWVVHMMNRNKESALYVAYERGRH 99 (140)
Q Consensus 36 g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~t~l~~A~~~~~~ 99 (140)
+.||||+|+..|+.+++++|++.....++..+..|.|| ..+..++.++..|.||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 81 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL 81 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 46899999999999999999999443478889999999 23445677888999999999999999
Q ss_pred HHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 100 DVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 100 ~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+++++|++.|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 82 ~~v~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 121 (156)
T 1bd8_A 82 DTLKVLVEHGADVNVPDGTGAL-PIHLAVQEGHTAVVSFLA 121 (156)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCC-HHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCc-HHHHHHHhChHHHHHHHH
Confidence 9999999999999999999999 999999999999999884
No 106
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.88 E-value=1.7e-24 Score=147.55 Aligned_cols=112 Identities=16% Similarity=0.107 Sum_probs=95.8
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHH-hhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAII-KQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~-~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
+|||.|++.|+.+++++|++.+++.. .+..+.+ .||||+|+..|+.+++++|+++|+++ +.
T Consensus 130 tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~-----------------~~ 191 (376)
T 2aja_A 130 QAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTE-----------------AT 191 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGG-----------------HH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCcc-----------------ch
Confidence 59999999999999999999986310 1122223 89999999999999999999999975 44
Q ss_pred --cccCCCcHHHHHH-HcCCHHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 82 --MNRNKESALYVAY-ERGRHDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 82 --~~~~~~t~l~~A~-~~~~~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.+..|.||||+|+ ..|+.+++++|++.|+ .+.| ||++|+..|+.+++++|+
T Consensus 192 ~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~t-aL~~Aa~~g~~evv~lL~ 245 (376)
T 2aja_A 192 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAY-AEIHEFEYGEKYVNPFIA 245 (376)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHH-HHHCTTTTTTTTHHHHHH
T ss_pred hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccch-HHHHHHHCCCHHHHHHHH
Confidence 6778999999999 9999999999998764 2677 999999999999999874
No 107
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.88 E-value=3.2e-22 Score=120.68 Aligned_cols=102 Identities=16% Similarity=0.095 Sum_probs=91.5
Q ss_pred CCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCC-----------------CchhhhhccccCCCcHHHHHHHcCC
Q 038923 36 SNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETP-----------------TDSWVVHMMNRNKESALYVAYERGR 98 (140)
Q Consensus 36 g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~t~l~~A~~~~~ 98 (140)
..++||.|+..|+.+++++|++.+.+. . .+..|.|| ..+..++..+..|+||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 358999999999999999999999874 2 57889998 3444567788899999999999999
Q ss_pred HHHHHHHHcCCCccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 99 HDVVKQLLNYPSVSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 99 ~~~~~~L~~~~~~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 120 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMT-ALHWATEHNHQEVVELLI 120 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999 999999999999999884
No 108
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=3.2e-22 Score=127.40 Aligned_cols=91 Identities=24% Similarity=0.202 Sum_probs=85.1
Q ss_pred CCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcC-CC
Q 038923 32 VPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNY-PS 110 (140)
Q Consensus 32 ~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~-~~ 110 (140)
.+..|.||||+|+..|+.+++++|++.+.++ +..+..|+||||+|+..|+.+++++|++. |+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-----------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~ 131 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGV-----------------NGLDKAGSTALYWACHGGHKDIVEMLFTQPNI 131 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-----------------TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCc-----------------cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCC
Confidence 3457899999999999999999999999886 67888999999999999999999999998 99
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHhhhC
Q 038923 111 VSLLEMDDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 111 ~~~~~~~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
+++.++..|+| |||+|+..|+.+++++|+
T Consensus 132 ~~~~~d~~g~t-pL~~A~~~~~~~~v~~Ll 160 (222)
T 3ehr_A 132 ELNQQNKLGDT-ALHAAAWKGYADIVQLLL 160 (222)
T ss_dssp CCCCCCTTSCC-HHHHHHHHTCHHHHHHHH
T ss_pred CccccCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 99999999999 999999999999999884
No 109
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=7.7e-22 Score=122.38 Aligned_cols=88 Identities=23% Similarity=0.203 Sum_probs=82.1
Q ss_pred CCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccc
Q 038923 34 GSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSL 113 (140)
Q Consensus 34 ~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~ 113 (140)
..|.||||+|+..|+.+++++|++ +.++ +..+..|+||||+|+..|+.+++++|++.|++++
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-----------------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 103 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDV-----------------DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 103 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCT-----------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCC-----------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 468999999999999999999999 7765 6788999999999999999999999999999999
Q ss_pred ccc-CCCCChHHHHHHHcCCHHHHhhhC
Q 038923 114 LEM-DDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 114 ~~~-~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+ ..|+| |||+|+..|+.+++++|+
T Consensus 104 ~~~~~~g~t-pL~~A~~~~~~~~v~~Ll 130 (183)
T 3deo_A 104 HRDMRGGLT-ALHMAAGYVRPEVVEALV 130 (183)
T ss_dssp CCCSSSSCC-HHHHHHHTTCHHHHHHHH
T ss_pred cCCCCCCCC-HHHHHHhcCcHHHHHHHH
Confidence 888 78999 999999999999999884
No 110
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.85 E-value=7e-21 Score=109.04 Aligned_cols=85 Identities=20% Similarity=0.306 Sum_probs=78.9
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.++||.|+..|+.+.++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|+++ +.
T Consensus 25 ~t~L~~A~~~g~~~~v~~Ll~~g~~i--~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-----------------~~ 85 (110)
T 2zgd_A 25 GKKLLEAARAGQDDEVRILMANGADV--AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-----------------XA 85 (110)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------TC
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-----------------cc
Confidence 36899999999999999999998776 667889999999999999999999999999986 67
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHH
Q 038923 82 MNRNKESALYVAYERGRHDVVKQL 105 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L 105 (140)
++..|+||||+|+..|+.+++++|
T Consensus 86 ~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 86 QDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cccCCCcHHHHHHHcCCHHHHHHh
Confidence 889999999999999999999987
No 111
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=1.4e-21 Score=126.31 Aligned_cols=88 Identities=23% Similarity=0.203 Sum_probs=82.1
Q ss_pred CCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccc
Q 038923 34 GSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSL 113 (140)
Q Consensus 34 ~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~ 113 (140)
..|.||||+|+..|+.+++++|++ +.++ +..+..|+||||+|+..|+.+++++|++.|++++
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-----------------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 104 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDV-----------------DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 104 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCT-----------------TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCC-----------------CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 468999999999999999999999 7765 6788999999999999999999999999999999
Q ss_pred ccc-CCCCChHHHHHHHcCCHHHHhhhC
Q 038923 114 LEM-DDGLTTSLHVAASAGHLGTFANLV 140 (140)
Q Consensus 114 ~~~-~~~~t~~l~~A~~~g~~~~~~~Ll 140 (140)
..+ ..|.| |||+|+..|+.+++++|+
T Consensus 105 ~~~~~~g~t-~L~~A~~~g~~~~v~~Ll 131 (244)
T 3ui2_A 105 HRDMRGGLT-ALHMAAGYVRPEVVEALV 131 (244)
T ss_dssp CCCSSSCCC-HHHHHHHTTCHHHHHHHH
T ss_pred cCCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 888 67999 999999999999999884
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=5.8e-21 Score=134.49 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=85.0
Q ss_pred CHHHHHHHH---cCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhh
Q 038923 2 DERLFETIL---KGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWV 78 (140)
Q Consensus 2 ~~~l~~a~~---~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 78 (140)
.||||.|++ .|+.++++.|++.+.++ +..|..|+||||+|+..|+.+++++|+++|+++
T Consensus 172 ~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v--n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~---------------- 233 (497)
T 3lvq_E 172 ELVLHLAVKVANQASLPLVDFIIQNGGHL--DAKAADGNTALHYAALYNQPDCLKLLLKGRALV---------------- 233 (497)
T ss_dssp BCHHHHHHHTCCTTTHHHHHHHHHHSCCT--TCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCC----------------
T ss_pred chHHHHHHHhcccccHHHHHHHHHcCCCC--CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC----------------
Confidence 378999977 99999999999999887 778899999999999999999999999999986
Q ss_pred hhccccCCCcHHHHHHHcCCHHHHHHHHcCCCccccc
Q 038923 79 VHMMNRNKESALYVAYERGRHDVVKQLLNYPSVSLLE 115 (140)
Q Consensus 79 ~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~~~~~ 115 (140)
+.+|..|.||||+|+..|+.+++++|++.|++++..
T Consensus 234 -~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 234 -GTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp -SCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred -CCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 788999999999999999999999999999987663
No 113
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=6.4e-21 Score=125.43 Aligned_cols=91 Identities=16% Similarity=0.141 Sum_probs=85.2
Q ss_pred CHHHHHHHHc---CCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhh
Q 038923 2 DERLFETILK---GDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWV 78 (140)
Q Consensus 2 ~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 78 (140)
.||||.|+.. |+.++++.|++.+.++ +..|..|.||||+|+..|+.+++++|++.|+++
T Consensus 170 ~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i--n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~---------------- 231 (278)
T 1dcq_A 170 ETALHLAVRSVDRTSLHIVDFLVQNSGNL--DKQTGKGSTALHYCCLTDNAECLKLLLRGKASI---------------- 231 (278)
T ss_dssp CBHHHHHHHHCCTTTHHHHHHHHHHCSCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----------------
T ss_pred CCcchHHHHhcccchHHHHHHHHHCCCCc--cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----------------
Confidence 4799999999 8999999999998887 678899999999999999999999999999986
Q ss_pred hhccccCCCcHHHHHHHcCCHHHHHHHHcCCCc
Q 038923 79 VHMMNRNKESALYVAYERGRHDVVKQLLNYPSV 111 (140)
Q Consensus 79 ~~~~~~~~~t~l~~A~~~~~~~~~~~L~~~~~~ 111 (140)
+.+|..|.||||+|+..|+.+++++|++.|++
T Consensus 232 -~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 232 -EIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp -TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred -CCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 78899999999999999999999999988775
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=1e-19 Score=123.72 Aligned_cols=110 Identities=16% Similarity=0.138 Sum_probs=83.0
Q ss_pred CHHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCCcHHHHHHhhCcHHHHHHHHhhCCcccCCCCCCCCCCCchhhhhc
Q 038923 2 DERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSNTILHLASRYEHEELALEILKLCPEMLAAPNDKFETPTDSWVVHM 81 (140)
Q Consensus 2 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
.||||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.|+++ +.
T Consensus 236 ~TpLh~Aa~~g~~~iv~~LL~~Gadv--n~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~-----------------~~ 296 (368)
T 3jue_A 236 ATPLIQATAANSLLACEFLLQNGANV--NQADSAGRGPLHHATILGHTGLACLFLKRGADL-----------------GA 296 (368)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-----------------TC
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCC-----------------CC
Confidence 47999999999999999999998877 678899999999999999999999999999986 78
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHcCC---CccccccCCCCChHHHHHHHcC
Q 038923 82 MNRNKESALYVAYERGRHDVVKQLLNYP---SVSLLEMDDGLTTSLHVAASAG 131 (140)
Q Consensus 82 ~~~~~~t~l~~A~~~~~~~~~~~L~~~~---~~~~~~~~~~~t~~l~~A~~~g 131 (140)
.|..|.||||+|+..|+.+++++|+..+ .+....+..+.| +++++....
T Consensus 297 ~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t-~l~i~~~~~ 348 (368)
T 3jue_A 297 RDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDET-YLDIFRDFS 348 (368)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------------
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCC-HHHHHHHHH
Confidence 8999999999999999999999999654 333344545666 887765543
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=78.67 E-value=0.88 Score=20.05 Aligned_cols=17 Identities=29% Similarity=0.454 Sum_probs=10.2
Q ss_pred HHHHHHHcCCHHHHHHH
Q 038923 4 RLFETILKGDVPNFLNL 20 (140)
Q Consensus 4 ~l~~a~~~g~~~~~~~l 20 (140)
.+..||..|+.+.++.|
T Consensus 16 qiyvA~seGd~etv~~L 32 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHHTTSCHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHH
Confidence 35566666666666554
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=70.48 E-value=14 Score=25.79 Aligned_cols=52 Identities=17% Similarity=0.330 Sum_probs=39.1
Q ss_pred HHHcCCHHHHHHHhhhchHH----------HhhcCC--CCCCcHHHHHHhhCcHHHHHHHHhhC
Q 038923 8 TILKGDVPNFLNLVHEDEAI----------IKQTVP--GSSNTILHLASRYEHEELALEILKLC 59 (140)
Q Consensus 8 a~~~g~~~~~~~ll~~~~~~----------~~~~~~--~~g~t~l~~A~~~g~~~~~~~Ll~~~ 59 (140)
.+.-|+...|+..+..+.++ +.+-.+ .-|.|.+|+|.++.+-+++..|+..+
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhcc
Confidence 45569999999988877554 111122 34899999999999999999999744
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=38.12 E-value=86 Score=22.10 Aligned_cols=45 Identities=18% Similarity=0.129 Sum_probs=32.6
Q ss_pred HHcCCHHHHHHHHcCCCccccc--------------cCCCCChHHHHHHHcCCHHHHhhh
Q 038923 94 YERGRHDVVKQLLNYPSVSLLE--------------MDDGLTTSLHVAASAGHLGTFANL 139 (140)
Q Consensus 94 ~~~~~~~~~~~L~~~~~~~~~~--------------~~~~~t~~l~~A~~~g~~~~~~~L 139 (140)
+..|+...|+.-+..|.++..+ ..-|.| -+|+|++..+-+++..|
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~t-lvhlair~~r~~~l~~l 88 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYT-LVHLAIRFQRQDMLAIL 88 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCC-HHHHHHHTTCHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCch-hhhhhhhhhhhhHHHHh
Confidence 3467777777767666665422 236888 99999999999888766
No 118
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=37.06 E-value=70 Score=19.40 Aligned_cols=53 Identities=13% Similarity=0.049 Sum_probs=34.0
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHHHhhcCCCCCC-cHHHHHHhhCcHHHHHHHHhhCCcc
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAIIKQTVPGSSN-TILHLASRYEHEELALEILKLCPEM 62 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~g~-t~l~~A~~~g~~~~~~~Ll~~~~~~ 62 (140)
+.+-.|...|+++....+.+.... ..-| ..=..|...|++++++..+++..+.
T Consensus 10 ~rF~LAL~lg~l~~A~e~a~~l~~-------~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~ 63 (177)
T 3mkq_B 10 IRFDLALEYGNLDAALDEAKKLND-------SITWERLIQEALAQGNASLAEMIYQTQHSF 63 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHCC-------HHHHHHHHHHHHHTTCHHHHHHHHHHTTCH
T ss_pred HHHHHHHhcCCHHHHHHHHHHhCC-------HHHHHHHHHHHHHcCChHHHHHHHHHhCCH
Confidence 457789999999998877554211 1112 2224567778888888777776653
No 119
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=20.75 E-value=1.1e+02 Score=18.76 Aligned_cols=25 Identities=12% Similarity=0.240 Sum_probs=21.6
Q ss_pred HHHHHHHHcCCHHHHHHHhhhchHH
Q 038923 3 ERLFETILKGDVPNFLNLVHEDEAI 27 (140)
Q Consensus 3 ~~l~~a~~~g~~~~~~~ll~~~~~~ 27 (140)
.+|..|++.||+..+...++.+...
T Consensus 84 ~~L~~Avr~Gdl~~f~~~l~~~~~~ 108 (203)
T 3t5x_A 84 AEVTRAVSEGNLLLLHEALAKHEAF 108 (203)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHhHHH
Confidence 5788999999999999999987654
Done!