Query 038924
Match_columns 920
No_of_seqs 344 out of 999
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 04:37:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038924.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038924hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2119 Predicted bile acid be 100.0 6E-211 1E-215 1753.5 57.7 854 16-912 19-879 (879)
2 COG4354 Predicted bile acid be 100.0 2E-114 5E-119 956.1 52.8 680 83-859 9-720 (721)
3 PF04685 DUF608: Protein of un 100.0 6.9E-83 1.5E-87 716.3 9.7 360 492-854 1-365 (365)
4 PF12215 GBA2_N: beta-Glucocer 100.0 2E-60 4.3E-65 524.4 32.7 290 88-404 1-299 (299)
5 COG3459 Cellobiose phosphoryla 100.0 4.8E-43 1.1E-47 409.9 38.2 573 100-812 275-922 (1056)
6 TIGR01577 oligosac_amyl oligos 100.0 1.7E-24 3.6E-29 261.3 51.8 566 99-838 3-593 (616)
7 PF06202 GDE_C: Amylo-alpha-1, 100.0 4.9E-26 1.1E-30 258.2 31.7 293 516-856 42-369 (370)
8 COG3408 GDB1 Glycogen debranch 99.9 3.9E-22 8.4E-27 237.8 26.9 299 508-864 287-615 (641)
9 TIGR01561 gde_arch glycogen de 99.9 1.5E-20 3.2E-25 221.7 23.4 233 517-789 306-567 (575)
10 PRK10137 alpha-glucosidase; Pr 99.8 2.7E-19 5.9E-24 214.7 28.0 303 504-835 347-759 (786)
11 TIGR01531 glyc_debranch glycog 99.8 1.5E-18 3.3E-23 214.6 26.6 294 516-857 1049-1459(1464)
12 TIGR01535 glucan_glucosid gluc 99.7 4.1E-14 8.9E-19 169.5 47.2 505 178-835 58-598 (648)
13 PF03512 Glyco_hydro_52: Glyco 99.7 7.5E-17 1.6E-21 175.9 18.0 299 193-600 98-416 (428)
14 PF05592 Bac_rhamnosid: Bacter 99.5 3.7E-13 7.9E-18 159.9 17.3 241 593-875 209-466 (509)
15 PLN03005 beta-fructofuranosida 99.4 2.4E-10 5.1E-15 129.3 26.5 248 581-857 203-516 (550)
16 PLN02973 beta-fructofuranosida 99.3 1.4E-09 3.1E-14 123.2 27.4 251 581-857 224-537 (571)
17 PRK13271 treA trehalase; Provi 99.3 7.4E-10 1.6E-14 130.8 25.9 263 516-834 170-504 (569)
18 COG3387 SGA1 Glucoamylase and 99.3 5.8E-10 1.3E-14 133.8 24.9 280 513-835 292-580 (612)
19 PLN02567 alpha,alpha-trehalase 99.2 4.6E-09 1E-13 124.6 28.5 277 508-835 156-513 (554)
20 PF01204 Trehalase: Trehalase; 99.2 7E-10 1.5E-14 131.3 20.7 262 509-816 133-462 (512)
21 PRK13272 treA trehalase; Provi 99.2 7.9E-09 1.7E-13 121.2 27.5 250 516-816 171-488 (542)
22 PLN02703 beta-fructofuranosida 99.2 6.5E-09 1.4E-13 118.6 25.5 253 579-856 254-568 (618)
23 PRK13270 treF trehalase; Provi 99.1 4.8E-08 1E-12 115.0 28.5 262 516-835 182-514 (549)
24 PF12899 Glyco_hydro_100: Alka 99.1 3.1E-08 6.6E-13 110.5 24.1 252 580-858 114-429 (436)
25 PF03200 Glyco_hydro_63: Manno 98.3 5.3E-05 1.2E-09 94.1 24.3 306 515-856 407-795 (801)
26 PF06165 Glyco_transf_36: Glyc 98.3 1.1E-06 2.5E-11 83.0 6.8 64 171-243 30-93 (110)
27 PF00723 Glyco_hydro_15: Glyco 98.1 7E-05 1.5E-09 88.0 17.8 186 587-797 125-349 (448)
28 COG1626 TreA Neutral trehalase 98.1 0.00055 1.2E-08 79.3 22.6 250 516-816 182-503 (558)
29 KOG0602 Neutral trehalase [Car 98.0 0.00016 3.4E-09 85.3 17.6 269 516-835 196-532 (600)
30 PF06205 GT36_AF: Glycosyltran 97.8 0.0001 2.2E-09 67.2 8.4 80 271-363 4-84 (90)
31 PF06824 DUF1237: Protein of u 97.5 0.0012 2.6E-08 75.4 13.7 237 588-851 128-414 (424)
32 KOG3625 Alpha amylase [Carbohy 97.2 0.031 6.8E-07 67.9 21.3 293 521-856 1099-1510(1521)
33 cd07430 GH15_N Glycoside hydro 96.7 0.19 4.1E-06 55.0 20.4 146 177-363 82-227 (260)
34 PF03632 Glyco_hydro_65m: Glyc 96.0 0.025 5.5E-07 64.7 9.2 100 589-692 106-217 (370)
35 COG3538 Uncharacterized conser 95.9 0.45 9.7E-06 52.9 17.7 251 588-862 135-428 (434)
36 PF08760 DUF1793: Domain of un 94.1 0.35 7.5E-06 49.3 9.9 92 664-769 2-98 (171)
37 cd00249 AGE AGE domain; N-acyl 94.0 2.6 5.7E-05 48.2 18.3 96 591-704 56-159 (384)
38 PRK13807 maltose phosphorylase 93.7 1 2.2E-05 56.5 15.1 86 589-678 426-517 (756)
39 KOG2161 Glucosidase I [Carbohy 92.4 7.3 0.00016 47.6 18.6 214 591-811 505-796 (849)
40 KOG4125 Acid trehalase [Carboh 92.0 0.86 1.9E-05 52.1 9.9 105 588-695 368-476 (682)
41 cd00249 AGE AGE domain; N-acyl 89.9 22 0.00048 40.5 19.5 89 593-700 120-211 (384)
42 PF07470 Glyco_hydro_88: Glyco 89.1 8.7 0.00019 43.4 15.2 159 583-755 119-286 (336)
43 COG1554 ATH1 Trehalose and mal 88.4 7.5 0.00016 48.3 14.5 83 588-674 434-522 (772)
44 COG4225 Predicted unsaturated 85.2 12 0.00027 42.0 12.8 20 593-612 41-60 (357)
45 PF07971 Glyco_hydro_92: Glyco 79.0 1.6E+02 0.0034 35.6 21.2 169 664-870 243-436 (502)
46 PF03663 Glyco_hydro_76: Glyco 78.7 10 0.00022 43.7 9.8 102 588-702 155-261 (370)
47 PF06204 CBM_X: Putative carbo 76.5 5.2 0.00011 34.5 4.9 48 100-148 5-56 (66)
48 PF07221 GlcNAc_2-epim: N-acyl 75.1 31 0.00067 39.0 12.3 91 593-702 26-120 (346)
49 COG2942 N-acyl-D-glucosamine 2 66.0 2.5E+02 0.0055 32.6 16.5 213 593-827 120-349 (388)
50 PF07221 GlcNAc_2-epim: N-acyl 61.3 34 0.00073 38.7 8.9 195 593-816 85-307 (346)
51 COG4833 Predicted glycosyl hyd 58.8 21 0.00047 38.8 6.1 102 592-707 152-257 (377)
52 KOG2119 Predicted bile acid be 56.4 18 0.00039 44.2 5.6 92 108-211 147-238 (879)
53 COG1331 Highly conserved prote 55.9 1.6E+02 0.0035 36.5 13.4 105 581-706 404-514 (667)
54 PF09137 Glucodextran_N: Gluco 44.0 4.9E+02 0.011 28.8 16.5 137 187-363 92-232 (269)
55 PF03663 Glyco_hydro_76: Glyco 43.3 67 0.0015 37.0 7.6 106 581-708 87-203 (370)
56 COG3537 Putative alpha-1,2-man 41.3 3.1E+02 0.0068 33.9 12.5 53 795-862 616-668 (768)
57 PF07721 TPR_4: Tetratricopept 39.0 52 0.0011 22.5 3.6 23 788-810 3-25 (26)
58 COG1331 Highly conserved prote 29.5 4.2E+02 0.009 33.0 11.3 97 593-705 214-318 (667)
59 cd04791 LanC_SerThrkinase Lant 28.4 5.2E+02 0.011 28.4 11.5 96 586-699 137-234 (321)
60 PF11349 DUF3151: Protein of u 27.7 82 0.0018 30.5 4.0 44 648-691 75-121 (129)
61 KOG2429 Glycosyl hydrolase, fa 26.9 2E+02 0.0043 34.8 7.7 138 666-835 203-359 (622)
62 PF13428 TPR_14: Tetratricopep 25.2 1.4E+02 0.0031 22.7 4.5 29 788-816 3-31 (44)
63 PF06045 Rhamnogal_lyase: Rham 24.1 2.7E+02 0.0059 29.4 7.5 64 121-185 18-85 (203)
64 PF13174 TPR_6: Tetratricopept 23.6 1E+02 0.0023 21.2 3.2 27 790-816 4-30 (33)
65 PF12854 PPR_1: PPR repeat 23.3 1E+02 0.0022 22.5 3.1 21 791-811 12-32 (34)
66 TIGR01535 glucan_glucosid gluc 23.3 3.1E+02 0.0067 34.3 9.0 39 782-821 293-331 (648)
67 PF14310 Fn3-like: Fibronectin 22.8 85 0.0018 27.0 3.0 20 344-363 24-43 (71)
68 TIGR03504 FimV_Cterm FimV C-te 20.2 1.6E+02 0.0035 23.3 3.7 25 790-814 3-27 (44)
No 1
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.4e-211 Score=1753.52 Aligned_cols=854 Identities=58% Similarity=1.044 Sum_probs=800.4
Q ss_pred CCCCCCCCCcccccccccCCCCCCCCCccCHHHHHhhccchhhhhhHHHHHhhcCCcCcccccccccCCCcccccccccc
Q 038924 16 PKVDPGQPPQLTWQRKLDSNVKVPTGFTLSFQEFRHLAHIGFRLYRYSKQEEAKGKVPVFNVFRKHHITSDQGIPLGGIG 95 (920)
Q Consensus 16 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~gvPLGGiG 95 (920)
.++|.+.++.+||||++|.+ +++|.++++|+++++| |+|.|+++|+.+||+.|||+|+++++++.+||||||||
T Consensus 19 ~~~~~a~~~a~~~rr~~~~~---~r~f~~~~~e~~~l~~---r~~~~~~~e~~~grk~~id~f~k~~~~~~~gVPlGGiG 92 (879)
T KOG2119|consen 19 RDLDGAGWKARGWRRPLDSN---PREFFLSIREAIKLVP---RLWLYTREEAWNGRKAFIDIFNKENHKSSHGVPLGGIG 92 (879)
T ss_pred ccccccCCcccccccccCCC---CccCchhHHHHhhhhh---hhhhhhhhhhhCCcccceeccccccccccccccccccc
Confidence 36999999999999999998 8999999999999999 99999999999999999999999999999999999999
Q ss_pred cceeeecCCCCeEEEEEeCCCCccccccCCCcEEEEEcCCCceeeEEeCCCCCCCCCcCCCCCCcccccccCCCCcceEE
Q 038924 96 AGSIGRSYRGEFQRFKLFHGICDDAPVLANQFSVFVSRPNGEKFSSVLCPRSPGVPKKNTDSGIESWDWNLKGENCTYHA 175 (920)
Q Consensus 96 ~Gsi~~~~~G~f~~w~l~~g~~~~~~v~an~F~~~v~~~~g~~~~~vL~~~~~~~~~~~~~~~l~~w~w~~~~~~~~Y~~ 175 (920)
+|+|||+++|+|++|+|+|+++++.++++|||+++|++++|.+|+.||++..|. ...++..+|++|+|++++++++|+|
T Consensus 93 ~GsIgr~frGeF~~f~l~Pgi~e~~~~~~nQF~~~vs~~~g~iy~svLs~~~~~-c~~~~~~gl~sWd~ni~~~~~~Y~~ 171 (879)
T KOG2119|consen 93 CGSIGRDFRGEFQRFQLFPGICEEEPVLANQFIVFVSRPGGKIYQSVLSPGDPQ-CGQRPATGLSSWDWNIPGEKSTYHG 171 (879)
T ss_pred cccccCccCCccceEEecCcccccchhhhceEEEEEEcCCceEEEEeecCCCcc-cccCCCCCccccccccCCcceeEee
Confidence 999999999999999999999999999999999999999999999999988876 3345678999999999999999999
Q ss_pred eccceEEEEeecCCCCeEEEEEEEcccccCCCCCCCCCEEEEEEEEEeCCCCeEEEEEEEEeccccCCCCCCCCcccccc
Q 038924 176 LFPRAWTVYDGEPDPELRIVCRQISPFIPHNYKESSFPASVFTFTLSNSGQTSADVTLLFTWANSVAGDSGLSGHHFNSK 255 (920)
Q Consensus 176 lyP~a~t~y~~~~~~~i~v~~~~~SP~IP~d~kdSSlPv~vf~~~v~N~~~~~~~vsl~~~~~n~~G~~~~~~~~~~n~~ 255 (920)
||||+||+|++.++. ++|+|+|+||||||||.|||+|+++|+|+|+|++.++++|||+|+|+|.+|+....+++++|+.
T Consensus 172 L~PRsWt~y~~~~~~-l~v~~rqvsp~ip~~y~dsslP~a~fv~~v~N~~~~e~~vsl~ft~~n~~g~~~~~~~~~~~s~ 250 (879)
T KOG2119|consen 172 LFPRSWTEYDGEPDG-LTVVCRQVSPVIPHNYRDSSLPVAVFVFTVENTGKEEAEVSLLFTFRNGTGNRSGLSGGHFNSQ 250 (879)
T ss_pred ecCceeEEeeccccc-cEEEEeecccccccccccccCcceEEEEEccccccceEEEEEEEEEecCCCccccccccccchh
Confidence 999999999976666 9999999999999999999999999999999999999999999999999999888899999976
Q ss_pred eecccCceeEEEeeccCCCCCCceEEEEEecCCCeEEEeeCccccCCCCCccchHHHHHHHHhcCCCCCCCCCCCC-CCC
Q 038924 256 TMTKDGVHGLTLHHRTANGRPPVTFAVAAEETADVHVSECPCFLLSGNSKGITAKDMWNEIKKHGSFDHLDNDKTS-PSE 334 (920)
Q Consensus 256 ~~~~~~~~Gv~l~~~~~~~~~~~~~aiaa~~~~~v~vt~~~~f~~~~~~~~~~~~~~W~~f~~~G~l~~~~~~~~~-~s~ 334 (920)
.+......++.+.|. ++.+|++|||||.++++++||.||+|++++.+ +++|+++.++|+|++... +| |+.
T Consensus 251 ~~~~~~~~~~~~~~~--~~~~P~Tyaiaa~~t~~~~VT~cp~Fdpsg~g-----~~lW~~lkq~G~~d~~~~--~s~ps~ 321 (879)
T KOG2119|consen 251 KIQLKTMVGVSLRTT--NGHMPVTYAIAARETEGVTVTVCPCFDPSGTG-----KDLWDDLKQNGSLDSLTS--PSEPSK 321 (879)
T ss_pred hhhhcccccceeecc--CCCCCeeEEeeeeccCCceEEEecccccCCcH-----HHHHHHHHhcCCCCCCCC--CCccCC
Confidence 555555667777764 55689999999999999999999999999876 999999999999998754 44 899
Q ss_pred CCCCeeEEEEEEeEecCCCEEEEEEEEeeeCCcccc--cchhhhhcccccccCCcchHHHHHHHHHHHHHHHHHHHHhhc
Q 038924 335 PGSSIGAAIAASLTIPSGSTRSVTFSLAWDCPEVKF--FEKVYHRRYTKFYGTLGDSAARIAHDAILEHAKWECEIEAWQ 412 (920)
Q Consensus 335 ~g~~~~aAva~~~~l~pge~~tv~F~LaW~~P~~~f--~g~~~~rrYt~~f~~~~~~a~~~a~~al~~~~~w~~~i~~wq 412 (920)
+|..+|+|||++++|+|+++++++|+|+||||+|+| +++.|+||||+||++.+++++++|++||.+|.+||++|++||
T Consensus 322 ~g~~ig~AVc~s~~v~P~~~~~~~FsLsWdmPkv~Fg~~~~ty~RrYTrFfg~~g~aa~ai~h~AL~~~~~WE~~IeaWQ 401 (879)
T KOG2119|consen 322 PGDSIGAAVCASVKVPPGGSHTVTFSLSWDMPKVHFGTKERTYHRRYTRFFGGAGDAAAAICHDALRNYSTWEEKIEAWQ 401 (879)
T ss_pred CCCeeeEEEEEeeEeCCCCceeEEEEEEecCcccccccccceeeeeeehhcCCCcchHHHHHHHHHhchhHHHHHHHHhh
Confidence 999999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcchhhhhhhhhhhccCceeeecC-CCCccchhhhhhhccccCCCCcccCCCCCCccccccccccCcccc
Q 038924 413 RPILEDKRFPEWYPITLFNELYYLNAGGTIWTDG-SPPMQSLATIRERKFSLDTPSKIHTPASSDTALGTRLLENGEENI 491 (920)
Q Consensus 413 ~pil~d~~lPdwy~~alfNeLyyl~~gg~iW~~~-~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~ 491 (920)
+|||+|.+||+|||+||||||||+++|||||++. .. +|.. +++|. +...++..+++
T Consensus 402 ~PiL~D~~LPeWYk~alFNELYfi~dGGTvW~e~~~~-------------sl~~-eE~~~---------~~~~~~~~~~~ 458 (879)
T KOG2119|consen 402 SPILNDEKLPEWYKSALFNELYFINDGGTVWFESYDS-------------SLGA-EELHA---------SHTTEDTEKEI 458 (879)
T ss_pred ccccccccchHHHHHhhhhheEEEecCcEEEEeeecC-------------Ccch-hhhcc---------ccccccchhhc
Confidence 9999999999999999999999999999999982 21 2221 22332 11225667889
Q ss_pred CceeeecCcccccccccccchhHHHHHHhhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCC--CC
Q 038924 492 GQFLYLEGAEYVMYNTYDVHFYSSFALVMLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIG--LD 569 (920)
Q Consensus 492 G~F~~~Eg~ey~~~nT~DV~fYas~al~~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G--~~ 569 (920)
|||+|+||+||+|||||||||||||||++|||+|+.++|++||+++..+|+++++++++|++++||+.|.||||+| ++
T Consensus 459 GrFgYLEg~EYrM~NTYDVHFYaSfALl~LwPklElSiQ~DFa~av~~~d~~~~k~l~~G~~~~rK~~~~VPHDlG~p~~ 538 (879)
T KOG2119|consen 459 GRFGYLEGWEYRMYNTYDVHFYASFALLMLWPKLELSIQRDFADAVLREDNTKRKFLSEGEWMTRKVLGAVPHDLGDPDN 538 (879)
T ss_pred cceeeeeeeEEEEEEeeeeeeehhHHHHHhchhhhhHHHHHHHHHHHhhcCccceeeecCcEEeeeecCcCCcccCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 68
Q ss_pred CCCcccccccccCcccccccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCCCccCCCCCCCccCCcC
Q 038924 570 DPWFEINSYNLFNSSRWKDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQFDKDGDGMIENEGFPDQTYDAWS 649 (920)
Q Consensus 570 ~Pw~~~~~y~~~D~~~W~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~~d~d~dGL~e~~G~~d~t~D~w~ 649 (920)
+||.++|+|++||+..|||||+|||++|||+|.+|||..||+.+||.|+.+|+++++||+|+||||||+|++|||||.|.
T Consensus 539 dPW~~~NaY~iHdT~rWKDLN~KFVLqvYRD~~~tgd~~flk~~wpsv~~ime~l~~fDKD~DGmIEN~GfpDQTYD~W~ 618 (879)
T KOG2119|consen 539 DPWIETNAYNIHDTGRWKDLNLKFVLQVYRDYVATGDEKFLKAVWPSVYAIMEYLEQFDKDNDGMIENEGFPDQTYDAWS 618 (879)
T ss_pred CchhhhceeeeccccchhhcCceeEEEEEeeeEEeccHHHHHHHHHHHHHHHHHHHhhcccCCcccccCCCCCccccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCCeeeEcCCCCCCccccccccchhhHHH
Q 038924 650 ANGVSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNGSYFNYDNSDGSSSTSIQADQLAGQWYA 728 (920)
Q Consensus 650 ~~G~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~yy~~D~~~~~~~~~i~~dql~Gq~~a 728 (920)
++|+|+||++||+|||++|++||+++|+++.+..|+.+++++|+++++ ||||.||+||...++.+++||+|||+|||++
T Consensus 619 ~tGvSAYCGgLWlAALqa~~amA~~~g~~~~~~~f~~klekak~~ye~kLWNGsYfnyD~s~s~~s~sImaDQlaGqWy~ 698 (879)
T KOG2119|consen 619 MTGVSAYCGGLWLAALQAASAMARQIGDPNTQDYFNNKLEKAKDVYEKKLWNGSYFNYDESSSGSSSSIMADQLAGQWYA 698 (879)
T ss_pred EecchhhhhHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHhhcCCceeccccCCCCcchhhHHHhHhhHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999987778889999999999999
Q ss_pred HHhCCCCCCCHHHHHHHHHHHHHhccccccCCccccccccCCCCcccCCCCccCCCcchHHHHHHHHHHHcCCHHHHHHH
Q 038924 729 RACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNGMQPDGRIDMSGLQAREIWPGVTYGLAASMIQEEMVDMAFQT 808 (920)
Q Consensus 729 ~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~g~~p~G~~~~~~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~ 808 (920)
.+|||+++++++++++||++||++||+++.+|.+|+||||.|+|+||.+++|++|||+|++|++||.||++|+.|+|+++
T Consensus 699 ~a~gl~~i~~~~~vrsAL~tIy~~NVm~~~~G~~GAVNGm~p~G~VD~ssiQS~EvW~GvtYalAAtMIqeG~~e~~FqT 778 (879)
T KOG2119|consen 699 RACGLPPIFPEEKVRSALDTIYDFNVMKFKGGRMGAVNGMLPSGKVDTSSIQSREVWAGVTYALAATMIQEGLVEKGFQT 778 (879)
T ss_pred HhcCCCccCchHHHHHHHHHHHhhceeeecCCceeccccccCCCccccccceehhhhccHHHHHHHHHHHHhhHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCCCCcCccCCCCCCccccchhhHHHHHHHHHcCCCCcccCCeeEEecCCchhhhhcchhhhhh
Q 038924 809 AAGVYEVAWSEDGLGYSFQTPESWNNNDEYRSLCYMRPLTIWAMQWALTKPKLSRQEIKHEISDRDSSYLEQHAAFSKVA 888 (920)
Q Consensus 809 ~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~w~~~~Al~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 888 (920)
+.|+|+++|++.|+|++|||||+|+..++||+..||||||||+||+||...+.-.. ......++.-+.++.+|++++
T Consensus 779 A~G~y~~~w~~~glg~~FqTPEa~~~~~~yRsl~YMRPLsIWamQwaL~~~~~~~~---~~~e~~~~i~~~~~~~f~~~s 855 (879)
T KOG2119|consen 779 ASGIYEAIWSETGLGYAFQTPEAWYMEDEYRSLGYMRPLAIWAMQWALTKPQAKPE---VVPELAPSISLQQGKGFGKVS 855 (879)
T ss_pred hhhhHHHHhhhcccceEEECchhhhcchhhhhhhhcchhHHHHHHHHHhcccccCC---CCccccccchhhcCCCcccHH
Confidence 99999999999999999999999999999999999999999999999998775332 111222334467899999999
Q ss_pred hccCCCcccCCcceehhhHHhhhc
Q 038924 889 SLLKLPKEEASKGFLKVVYDFTIG 912 (920)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~ 912 (920)
+.+++....++|+.++..|..+|+
T Consensus 856 ~~~s~~~~~~~~~~~~~~~~~~~~ 879 (879)
T KOG2119|consen 856 RDLSLLPVSDHKSRLQTPYETTLR 879 (879)
T ss_pred HhhcCCccchhhhhhccchhhccC
Confidence 999999888899999999998764
No 2
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-114 Score=956.09 Aligned_cols=680 Identities=30% Similarity=0.529 Sum_probs=580.7
Q ss_pred CCCcccccccccccceeeecCCCCeEEEEEeCCCCcc--ccccCCCcEEEEEcCCCceeeEEeCCCCCCCCCcCCCCCCc
Q 038924 83 ITSDQGIPLGGIGAGSIGRSYRGEFQRFKLFHGICDD--APVLANQFSVFVSRPNGEKFSSVLCPRSPGVPKKNTDSGIE 160 (920)
Q Consensus 83 ~~~~~gvPLGGiG~Gsi~~~~~G~f~~w~l~~g~~~~--~~v~an~F~~~v~~~~g~~~~~vL~~~~~~~~~~~~~~~l~ 160 (920)
+++.+||||||||||+++++.+++...|+|+|....| .+..++||++|..-++.+ ..+|++..+ .+.+++
T Consensus 9 d~~~~GvPLGGiGtGk~eI~~~~ri~~~ti~nngGN~i~~~~~~~~F~vf~~~~dk~--~~~lqt~~~------~dg~l~ 80 (721)
T COG4354 9 DGPDHGVPLGGIGTGKLEIGRDVRIYFITIHNNGGNPIRKNRPACGFHVFEAPEDKK--AYILQTYPY------KDGSLP 80 (721)
T ss_pred CCcccCccccccccCceeecccceeEEEEEEcCCCChhhhhccccceeEEeeccccc--eEEEeccCC------ccCCCc
Confidence 5788999999999998888888888888888765444 367799999998764434 456665543 345789
Q ss_pred ccccccCCCCcceEEeccceEEEEeecCCCCeEEEEEEEcccccCCCCCCCCCEEEEEEEEEeCCCCeEEEEE-EEEecc
Q 038924 161 SWDWNLKGENCTYHALFPRAWTVYDGEPDPELRIVCRQISPFIPHNYKESSFPASVFTFTLSNSGQTSADVTL-LFTWAN 239 (920)
Q Consensus 161 ~w~w~~~~~~~~Y~~lyP~a~t~y~~~~~~~i~v~~~~~SP~IP~d~kdSSlPv~vf~~~v~N~~~~~~~vsl-~~~~~n 239 (920)
.|.|.+.. ..+|+|+||++|.+|+ . . .++|+|+||||+||.|+|+||+||++|.|+++|.++.+..+|| +.+++|
T Consensus 81 ~~~~y~~~-~iey~g~yP~~~~~y~-n-~-~~Ev~lEaFSpi~~~dvknSSlPva~f~~~v~~~~~~~itisfp~i~~~~ 156 (721)
T COG4354 81 KWQWYPKE-EIEYEGEYPVSWYVYK-N-V-KVEVKLEAFSPIIPNDVKNSSLPVAVFSWRVKGPTEGPITISFPNIVGSN 156 (721)
T ss_pred cceeccCc-ceeEeeecceEEEEec-C-c-ceeEEeeeecccccCccccccCceEEEEEeecCCCCCceEEEeecccccc
Confidence 99888865 6899999999999997 3 3 7999999999999999999999999999999999999988888 777788
Q ss_pred ccCCCCCCCCcccccceecccCceeEEEeeccCCCCCC-----------ceEEEEEecCCCeEEEeeCccccCCCCCccc
Q 038924 240 SVAGDSGLSGHHFNSKTMTKDGVHGLTLHHRTANGRPP-----------VTFAVAAEETADVHVSECPCFLLSGNSKGIT 308 (920)
Q Consensus 240 ~~G~~~~~~~~~~n~~~~~~~~~~Gv~l~~~~~~~~~~-----------~~~aiaa~~~~~v~vt~~~~f~~~~~~~~~~ 308 (920)
.+|+. |+.. + .|+++-+..+...+| +..+|+.-..+.+.+-+...|.+.+.+
T Consensus 157 ~vG~~--------~~~~--k---n~vV~k~e~~s~ydPr~g~s~l~~~~g~~cIt~~~~~~~~v~y~n~w~~~~~~---- 219 (721)
T COG4354 157 SVGRF--------NEAI--K---NGVVHKNEKASEYDPRYGESTLIEGEGSKCITQYNLKRKPVFYHNRWNPQGEG---- 219 (721)
T ss_pred ccchh--------hhhh--c---CCeeEecCcccccCcccccccccccccceehhhhccccccceeeccccccccc----
Confidence 77753 3221 1 244444433332222 335666544443444455567777665
Q ss_pred hHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeeEEEEEEeEecCCCEEEEEEEEeeeCCcccccchhhhhcccccccCCcc
Q 038924 309 AKDMWNEIKKHGSFDHLDNDKTSPSEPGSSIGAAIAASLTIPSGSTRSVTFSLAWDCPEVKFFEKVYHRRYTKFYGTLGD 388 (920)
Q Consensus 309 ~~~~W~~f~~~G~l~~~~~~~~~~s~~g~~~~aAva~~~~l~pge~~tv~F~LaW~~P~~~f~g~~~~rrYt~~f~~~~~ 388 (920)
.+.|+.|.+++++.+.... ....+++.++++++. |+..+++|+++||+|... .+..+.++|++||+.
T Consensus 220 -~e~W~~f~~~~~~~d~~~~--~~~~~~e~lg~~i~~------~~~~ei~fv~aW~fp~~~-~~~~vghYYenFF~~--- 286 (721)
T COG4354 220 -EEVWDKFARNEEVPDEPDE--VTGHRGEQLGIAISK------GEGEEITFVLAWYFPGTE-FAYPVGHYYENFFKD--- 286 (721)
T ss_pred -ccHHHHhhcCCccCCCccc--ccCCCCCcceeEEec------cCCcceeEEEEEecCCcc-cccccchhhhhhhcc---
Confidence 8999999999998554221 123456778877777 999999999999999766 445667779999887
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCcchhhhhhhhhhhccCceeeecCCCCccchhhhhhhccccCCCCc
Q 038924 389 SAARIAHDAILEHAKWECEIEAWQRPILEDKRFPEWYPITLFNELYYLNAGGTIWTDGSPPMQSLATIRERKFSLDTPSK 468 (920)
Q Consensus 389 ~a~~~a~~al~~~~~w~~~i~~wq~pil~d~~lPdwy~~alfNeLyyl~~gg~iW~~~~~~~~~~~~~~~~~f~l~~~~~ 468 (920)
..++|.++|+|++.|+++|++||.||++.+.+|||+++|+||+||.|++ +.|.+
T Consensus 287 -s~eva~yaL~n~~~l~~ki~~~~~~i~n~~~~~~Wlkdal~n~lyiLts--~tWld----------------------- 340 (721)
T COG4354 287 -SGEVAKYALKNFNTLRKKIEQWQDPILNVPELPDWLKDALFNSLYILTS--NTWLD----------------------- 340 (721)
T ss_pred -HHHHHHHHHHhHHHHHHHhhhhcchhhcCcchHHHHHHHHHHHHHHHhh--ccccc-----------------------
Confidence 6779999999999999999999999999999999999999999999887 67733
Q ss_pred ccCCCCCCccccccccccCccccCceeeecCcccccccc--cccchhHHHHHHhhcHHHHHHHHHHHHHHhhccCCCcee
Q 038924 469 IHTPASSDTALGTRLLENGEENIGQFLYLEGAEYVMYNT--YDVHFYSSFALVMLFPKLELSIQRDFAAAVMMHDPGTMK 546 (920)
Q Consensus 469 ~~~~~~~~~~~~t~~~~~~~~~~G~F~~~Eg~ey~~~nT--~DV~fYas~al~~l~PeL~r~~l~~fa~~~~~~d~~~~~ 546 (920)
++|||+++||.+|+-+-. -||.+|+|++|++|||||++++++.|++++.++|++.+.
T Consensus 341 ---------------------~~G~FaV~E~~~~~~y~~tig~~~~~GsfgllllfPeLek~~~~~f~~~i~~eD~~~~v 399 (721)
T COG4354 341 ---------------------KDGRFAVYECPFYTWYESTIGDVRLYGSFGLLLLFPELEKSVMRAFARAIPKEDTEYRV 399 (721)
T ss_pred ---------------------CCCceEEEecccccchhcccceeEecCCchHHHHhHHHHHHHHHHHHHhccccCCceee
Confidence 259999999999997755 799999999999999999999999999999999998888
Q ss_pred eecCCcchhcccCCCCccCCCC-CCCCcccccccccCcccccccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Q 038924 547 IMSDGKWVARKCLGAVPHDIGL-DDPWFEINSYNLFNSSRWKDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYME 625 (920)
Q Consensus 547 ~~~~g~~~~rk~~G~vPhd~G~-~~Pw~~~~~y~~~D~~~W~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~ 625 (920)
+-..-..+.||.++.+|||+|. .++|..+++--.+|+.+|+|++|.||++||||++.|+|++||+++||.++++|||++
T Consensus 400 ~gy~~~~~~~k~~~~tphDLg~~ehs~e~~iy~t~~d~~~wkDlgp~fVLlvYrdf~~T~D~eFL~e~y~~iv~~iD~~~ 479 (721)
T COG4354 400 IGYAFPEAERKKDPATPHDLGPNEHSIEKPIYGTYQDPNLWKDLGPDFVLLVYRDFKFTNDREFLKEVYPVIVEAIDWLK 479 (721)
T ss_pred eeeccchhhccCCCCCCcccCccccchhcccccccCCchhhhhcCCcEEeeehhhhhhcccHHHHHHHHHHHHHHHHHHH
Confidence 7665566899999999999994 467777666666788899999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCccCCCCCCCccCCcCccchhhHHHHHHHHHHHHHHHHHHHcCCc-----------hHHHHHHHHHHHHHHH
Q 038924 626 QFDKDGDGMIENEGFPDQTYDAWSANGVSAYCGGLWVAALQAASALANDVGDH-----------ASASYFWVRYQKAKAV 694 (920)
Q Consensus 626 ~~d~d~dGL~e~~G~~d~t~D~w~~~G~say~~~l~~aAL~a~a~lA~~lGd~-----------~~a~~~~~~a~~~k~~ 694 (920)
++|.|+||||++.|.+||++|+|.+.|.++||++||++||.||.+|++.+++. -....|...++++++.
T Consensus 480 ~~d~d~DgiP~~~g~~d~~fDa~~i~G~ssy~~sl~iaal~A~l~is~~l~~~~~~~a~~e~~~~~~~~y~~~L~~~~e~ 559 (721)
T COG4354 480 RFDQDNDGIPENSGAMDNTFDATRIQGHSSYCGSLFIAALIAALEISKYLLDNAQLEALNEASKNYVDFYNTWLKEAREA 559 (721)
T ss_pred hhcccCCCCCcccCCcccccccceeechhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987 3456788899999999
Q ss_pred Hhh-hccCCeeeEcCCCCCCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCccccccccCCCCc
Q 038924 695 YDS-LWNGSYFNYDNSDGSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNGMQPDGR 773 (920)
Q Consensus 695 ~~~-lWng~yy~~D~~~~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~g~~p~G~ 773 (920)
|++ ||||+||+.++. ..+++++++||+||||+.++|||+++|.+++++||++|+++|+ ..+..|+.|+++|+|.
T Consensus 560 ~~~~LwNGkYy~lws~--~~~~s~lAsQL~Gqfy~~LLgLpdivdhd~~ksal~sIy~lnf---~~~~~~~~n~v~~dgs 634 (721)
T COG4354 560 FNKYLWNGKYYILWSN--SGNDSVLASQLCGQFYATLLGLPDIVDHDKIKSALESIYDLNF---NASEYCAANGVRPDGS 634 (721)
T ss_pred HHHhccCceeEecccc--cCchhhhHHHHHhHHHHHHcCCCcccchHHHHHHHHHHHhhcc---ccccccccCccCCCCC
Confidence 999 999999996643 2567999999999999999999999999999999999999887 4577899999999999
Q ss_pred ccC-CCCccCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCcCccCCC--CCCccccchhhHHH
Q 038924 774 IDM-SGLQAREIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNND--EYRSLCYMRPLTIW 850 (920)
Q Consensus 774 ~~~-~~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~~--~~r~~~Y~r~~a~w 850 (920)
|.. .+.|+-++|+|++|++|++|+++||.||++++.+.+++++.. .||.||+||+++..+ .+|..||.|++|+|
T Consensus 635 p~n~~svq~~s~W~gi~F~laa~m~~~Gm~de~~~~~e~~w~~l~~---ng~~fr~p~aInav~g~~~~l~~yv~~~s~W 711 (721)
T COG4354 635 PVNPLSVQPLSVWPGINFALAAHMIQMGMKDEGFELAENVWNQLKN---NGLQFRQPSAINAVGGETNRLSHYVGSPSIW 711 (721)
T ss_pred cCCcccccccccccchHHHHHHHHHHhcchhhhhHHHHHHHHHHHh---CCcccCChhheeeccceeeehhhccCCchHH
Confidence 887 678999999999999999999999999999999999999944 699999999999976 57899999999999
Q ss_pred HHHHHHcCC
Q 038924 851 AMQWALTKP 859 (920)
Q Consensus 851 ~~~~Al~g~ 859 (920)
+++-+|.|.
T Consensus 712 ~l~~l~~g~ 720 (721)
T COG4354 712 ALLFLLNGK 720 (721)
T ss_pred HHHHHhccc
Confidence 999999875
No 3
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []. It is involved in sphingomyelin generation and prevention of glycolipid accumulation and may also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo []. ; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0016021 integral to membrane; PDB: 1V7V_A 1V7W_A 1V7X_A.
Probab=100.00 E-value=6.9e-83 Score=716.33 Aligned_cols=360 Identities=53% Similarity=0.954 Sum_probs=132.4
Q ss_pred CceeeecCcccccccccccchhHHHHHHhhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCC--C
Q 038924 492 GQFLYLEGAEYVMYNTYDVHFYSSFALVMLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGL--D 569 (920)
Q Consensus 492 G~F~~~Eg~ey~~~nT~DV~fYas~al~~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~--~ 569 (920)
|||+++||++|+|+||+|||||+|+||++|||+|+++++++|++++..+|++.++++++|++++||+.|.||||+|. .
T Consensus 1 GrF~~~Eg~~~~~~~t~dv~~y~s~al~~lfP~Le~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~G~vphdlg~p~~ 80 (365)
T PF04685_consen 1 GRFAYLEGPEYPMYNTYDVHFYASFALLKLFPELERSMQRDFADAILSEDNTERKILYDGKIAPRKVRGAVPHDLGSPFD 80 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999997 4
Q ss_pred CCCcccccccccCcccccccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCCCccCCCCCCCccCCcC
Q 038924 570 DPWFEINSYNLFNSSRWKDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQFDKDGDGMIENEGFPDQTYDAWS 649 (920)
Q Consensus 570 ~Pw~~~~~y~~~D~~~W~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~~d~d~dGL~e~~G~~d~t~D~w~ 649 (920)
+||.++|+|..+|...|+|+|++||++|||||++|||.+||+++||+|++||+|+..+|.|+||||++.|.+|||||.|.
T Consensus 81 ~P~~~~n~y~~~~~~~~~D~~~~fVL~vyr~~~~TGD~~fL~~~wp~v~~a~~~~~~~D~d~dGl~e~~g~~D~TyD~~~ 160 (365)
T PF04685_consen 81 DPWDRTNAYNYHDVYAWKDLNPKFVLQVYRDYKWTGDRDFLKEMWPAVKKAMDYLLSWDRDGDGLPENPGHPDQTYDDWS 160 (365)
T ss_dssp ------------------------------------------EHHHHHHHHHHHHHHSB--TTS-BEEET---SSSTT-E
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhHHHHHHHHHHHHHhhCCCCCCCCCCCCCCccccccCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCCeee--EcCCCCCCccccccccchhhH
Q 038924 650 ANGVSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNGSYFN--YDNSDGSSSTSIQADQLAGQW 726 (920)
Q Consensus 650 ~~G~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~yy~--~D~~~~~~~~~i~~dql~Gq~ 726 (920)
+.|+|+||++||++||+++++||+.||+++.+++|++.+++++++|++ ||||+||+ +|.. ...+++|++|||+|||
T Consensus 161 ~~G~say~~~L~laAL~A~~emA~~lgd~~~a~~y~~~~~~~~~~~~~~LWnGeyy~~~~d~~-~~~~~~~~aDQl~Gqw 239 (365)
T PF04685_consen 161 MYGPSAYCGGLWLAALRAAAEMAKILGDPELAAKYRELAEKAKKAFNKKLWNGEYYRQWYDSK-YQNGDGCMADQLCGQW 239 (365)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHSEETTEE--EE----TTS-EES-TT-SS--E
T ss_pred eeCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHhhCHhheeeeeccC-CCCCCeEEeChhhHHH
Confidence 999999999999999999999999999999999999999999999999 99999999 7732 3467899999999999
Q ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCccccccccCCCCcccCCCCccCCCcchHHHHHHHHHHHcCCHHHHH
Q 038924 727 YARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNGMQPDGRIDMSGLQAREIWPGVTYGLAASMIQEEMVDMAF 806 (920)
Q Consensus 727 ~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~g~~p~G~~~~~~~~s~~vW~g~~y~lAa~mi~~G~~eeA~ 806 (920)
|+.+|||++++|+||+++||++|+++|++.+.++..|++||++|+|.++.++.|+.|||+|++|++|++||++||.+||+
T Consensus 240 ~a~~~gl~~v~~~e~v~sAL~sI~~~N~~~~~~~~~G~~n~~~p~g~~~~~~~q~~evW~G~~y~~Aa~mi~~G~~~e~~ 319 (365)
T PF04685_consen 240 WARLLGLGDVLDEEKVKSALRSIYEYNVKYFLGGEMGAVNGVWPDGKPDTSSPQSNEVWTGVEYAVAAHMIQEGMVEEGL 319 (365)
T ss_dssp EHHHHHHTT-S-HHHHHHHHHHHHHHHEE-S-BTTTBGGGGS-T------------------------------------
T ss_pred HHHHcCCcCCCCHHHHHHHHHHHHHhcCeEccCCCCcEEEeeeccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCcCccCCCCCCccccchhhHHHHHHH
Q 038924 807 QTAAGVYEVAWSEDGLGYSFQTPESWNNNDEYRSLCYMRPLTIWAMQW 854 (920)
Q Consensus 807 ~~~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~w~~~~ 854 (920)
++++++++++|.+ .|+.|++||+|++++.||++|||||||||+|+|
T Consensus 320 ~~~~~~~~~~~~~--~g~~f~~pE~~~~~~~~r~~~Y~R~ls~W~~~~ 365 (365)
T PF04685_consen 320 EIAKGIYDRYYGR--KGNPFNTPEAINADGNYRGSHYMRPLSIWSMQW 365 (365)
T ss_dssp ------------------------------------------------
T ss_pred ccccccccccccc--cccccccccccccccccccccccccccccccCC
Confidence 9999999999877 789999999999999999999999999999986
No 4
>PF12215 GBA2_N: beta-Glucocerebrosidase 2 N terminal; InterPro: IPR024462 This entry represents a domain found in beta-glucosidase 2 (also known as beta-glucocerebrosidase 2, acid beta-glucosidase, D-glucosyl-N-acylsphingosine glucohydrolase, or GCase), which is typically between 320 to 354 amino acids in length. It is found just after the extreme N terminus. This protein is located in the ER. The N-terminal is thought to be the luminal domain while the C-terminal is the cytosolic domain []. The catalytic domain of GBA-2 is unknown.
Probab=100.00 E-value=2e-60 Score=524.41 Aligned_cols=290 Identities=41% Similarity=0.830 Sum_probs=249.5
Q ss_pred cccccccccceeeecCCCCeEEEEEeCCCCccccccCCCcEEEEEcCCCceeeEEeCCCCCCCCCcCCCCCCcccccccC
Q 038924 88 GIPLGGIGAGSIGRSYRGEFQRFKLFHGICDDAPVLANQFSVFVSRPNGEKFSSVLCPRSPGVPKKNTDSGIESWDWNLK 167 (920)
Q Consensus 88 gvPLGGiG~Gsi~~~~~G~f~~w~l~~g~~~~~~v~an~F~~~v~~~~g~~~~~vL~~~~~~~~~~~~~~~l~~w~w~~~ 167 (920)
||||||||||||+|++||+|++|+|+|.+..+.. ||++++++++++..++||....++. ..|++|+| ++
T Consensus 1 G~PlGGiG~G~i~~~~~G~f~~w~i~n~p~~~~~----~F~v~~~~~~~~~~~~~l~~~~~~~------~~l~~w~~-~~ 69 (299)
T PF12215_consen 1 GVPLGGIGAGSIGRGGRGDFCRWQIFNNPGKYSY----QFAVFIRRKGGEPFARVLSGSPPPP------GGLSSWNW-LP 69 (299)
T ss_pred CCcccccccceEeEcCCccEEEEEEeccCCCcce----eeEEEEEeCCCceEEEEccCCCCCc------cccccccc-cc
Confidence 8999999999999999999999999766544222 9999999888878899998776532 27899999 76
Q ss_pred CCCcceEEeccceEEEEeecCCCCeEEEEEEEcccccCCCCCCCCCEEEEEEEEEeCCCCeEEEEEEEEeccccCCCCCC
Q 038924 168 GENCTYHALFPRAWTVYDGEPDPELRIVCRQISPFIPHNYKESSFPASVFTFTLSNSGQTSADVTLLFTWANSVAGDSGL 247 (920)
Q Consensus 168 ~~~~~Y~~lyP~a~t~y~~~~~~~i~v~~~~~SP~IP~d~kdSSlPv~vf~~~v~N~~~~~~~vsl~~~~~n~~G~~~~~ 247 (920)
+++|+|||||||++|+ + +.+|+|+|+|||||||||||||||||++|+|+|+|+++++++|||+|+|+|++|..+..
T Consensus 70 --~~~y~~lyP~a~~~y~-~-~~~v~v~~~~~SP~IP~d~k~SSlP~~vf~~~v~N~~~~~~~vsi~~s~~N~vG~~~~~ 145 (299)
T PF12215_consen 70 --DAEYHGLYPRAWTEYE-D-DFPVKVTCEQFSPFIPHDYKDSSLPVAVFEWTVENTSDEPVEVSIAFSWPNGVGWDGNG 145 (299)
T ss_pred --ceEEEEECceEEEEEe-c-CCCcEEEEEEECCccCCChhhcCCCeEEEEEEEEcCCCCcEEEEEEEEeeCCcCccccc
Confidence 8999999999999999 7 99999999999999999999999999999999999999999999999999999965333
Q ss_pred CCcc----ccc-ceecccCceeEEEeeccCCC--CCCceEEEEEecCCCeEEEeeCccccCCCCCccchHHHHHHHHhcC
Q 038924 248 SGHH----FNS-KTMTKDGVHGLTLHHRTANG--RPPVTFAVAAEETADVHVSECPCFLLSGNSKGITAKDMWNEIKKHG 320 (920)
Q Consensus 248 ~~~~----~n~-~~~~~~~~~Gv~l~~~~~~~--~~~~~~aiaa~~~~~v~vt~~~~f~~~~~~~~~~~~~~W~~f~~~G 320 (920)
..+. .+. ...+.++++||+|++..... ..++++||++.+.++++||+|++|++++. ..++|++|.++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~~g~~aia~~~~~~~~vs~~~~~~~~~~-----~~~~W~~~~~~G 220 (299)
T PF12215_consen 146 RKNESGGFQNDGNYRSSGGVNGVLLTNEKSPDIDPMNGTFAIAADEPPGVEVSVCPSFDPGGD-----GSDLWDDFKEDG 220 (299)
T ss_pred CcCcccccccCCcccccCceEEEEEecCCCCCCCCCCcEEEEEEeCCCCeEEEEcccccCCCC-----HHHHHHHHHhcC
Confidence 2221 111 12345568999999976543 35689999999999999999999998763 499999999999
Q ss_pred CCCCCCCCCCCCCCCCCCeeEEEEEEeEecCCCEEEEEEEEeeeCCcccc-cchhh-hhcccccccCCcchHHHHHHHHH
Q 038924 321 SFDHLDNDKTSPSEPGSSIGAAIAASLTIPSGSTRSVTFSLAWDCPEVKF-FEKVY-HRRYTKFYGTLGDSAARIAHDAI 398 (920)
Q Consensus 321 ~l~~~~~~~~~~s~~g~~~~aAva~~~~l~pge~~tv~F~LaW~~P~~~f-~g~~~-~rrYt~~f~~~~~~a~~~a~~al 398 (920)
+|+. ++.+++.+++|||++++|+|||+++|+|+|+||+|++.| .+..+ .||||+||++.++++.++|+|+|
T Consensus 221 ~l~~-------~~~~~~~~~~ava~~~~l~pg~~~~v~F~laW~~P~~~f~~~~~~~~r~Yt~ff~~~~~~a~~va~yal 293 (299)
T PF12215_consen 221 RLPS-------PSSAGEGLAGAVAVKFTLAPGESKTVRFALAWDFPNVYFGKGKKYYGRRYTNFFGTRGDNAWEVAEYAL 293 (299)
T ss_pred CCCC-------CCCCCCcceEEEEEEEEECCCCeEEEEEEEEEeCChheccCCCeeeCccccccCCCCcccHHHHHHHHH
Confidence 9942 466788899999999999999999999999999999988 44444 49999999999999999999999
Q ss_pred HHHHHH
Q 038924 399 LEHAKW 404 (920)
Q Consensus 399 ~~~~~w 404 (920)
+||++|
T Consensus 294 ~n~~~w 299 (299)
T PF12215_consen 294 SNYPRW 299 (299)
T ss_pred hhhhcC
Confidence 999776
No 5
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-43 Score=409.86 Aligned_cols=573 Identities=16% Similarity=0.220 Sum_probs=428.2
Q ss_pred eecCCCCeEEEEEeCCCCccc---cccCCC-cEEEEEcCCCceeeEEeCCCCC---------------CCCCcCCCCCCc
Q 038924 100 GRSYRGEFQRFKLFHGICDDA---PVLANQ-FSVFVSRPNGEKFSSVLCPRSP---------------GVPKKNTDSGIE 160 (920)
Q Consensus 100 ~~~~~G~f~~w~l~~g~~~~~---~v~an~-F~~~v~~~~g~~~~~vL~~~~~---------------~~~~~~~~~~l~ 160 (920)
+++.+|+.+...|.. ..+|. +++.|. |.+.++.+ |..|++.-+++.+ +.++.++.....
T Consensus 275 ~f~~~nr~yvi~l~g-~~tp~pWIn~l~ne~f~f~is~~-Ga~~sf~~nsr~y~~t~~~~d~v~~~~G~~iy~~d~~tg~ 352 (1056)
T COG3459 275 GFDEDNREYVIRLNG-ETTPAPWINVLSNEDFGFHISAE-GAAYSFFRNSRDYQLTPWKNDPVENRPGEAIYIRDDATGR 352 (1056)
T ss_pred CcccCCCEEEEEcCC-CcCCchHHHhccCccceeEEecc-cceeeeeccchhccccccccCCCCCCCCceEEEeecccCC
Confidence 578899999999887 44444 688776 99999886 5678887777643 122234444444
Q ss_pred ccccccCC-----CCcceEEeccceEEEEeecCCCCeEEEEEEEcccccCCCCCCCCCEEEEEEEEEeCCCCeEEEEEEE
Q 038924 161 SWDWNLKG-----ENCTYHALFPRAWTVYDGEPDPELRIVCRQISPFIPHNYKESSFPASVFTFTLSNSGQTSADVTLLF 235 (920)
Q Consensus 161 ~w~w~~~~-----~~~~Y~~lyP~a~t~y~~~~~~~i~v~~~~~SP~IP~d~kdSSlPv~vf~~~v~N~~~~~~~vsl~~ 235 (920)
. |++.. ....|+.+|+.+|+.|. ....+|.+++++ +||.. +|+.+..+.|+|++..++++++..
T Consensus 353 ~--~t~sa~~~r~~~~~~e~rhG~gyskf~-~~rn~L~~~~T~---~V~~~-----~~~el~~L~i~N~~e~~r~ls~~~ 421 (1056)
T COG3459 353 F--WTPSATPVRDGAFLYELRHGLGYSKFS-HERNGLNATKTL---FVPRE-----LPVELRILVIPNKGEVSRNLSVYA 421 (1056)
T ss_pred c--ccccchheecchhhhhhhhcccccccc-ccccceeeeeEE---EEecc-----CCcEEEEEEecccccccceeeeee
Confidence 4 46655 35669999999999998 689999999999 55556 699999999999999999999999
Q ss_pred EeccccCCCCCCCCcccccceecccCceeEEEeeccCCCCCCceEEEEEecCCCeEE-EeeCccccCCCCCccchHHHHH
Q 038924 236 TWANSVAGDSGLSGHHFNSKTMTKDGVHGLTLHHRTANGRPPVTFAVAAEETADVHV-SECPCFLLSGNSKGITAKDMWN 314 (920)
Q Consensus 236 ~~~n~~G~~~~~~~~~~n~~~~~~~~~~Gv~l~~~~~~~~~~~~~aiaa~~~~~v~v-t~~~~f~~~~~~~~~~~~~~W~ 314 (920)
+.++++|.....+..++. .+.++..+++...++.....+.+.++.+.+.+..++ +.+..|++. .++...|..
T Consensus 422 y~ew~lg~i~~~t~~~~~---s~~~~~~~~~~s~~~y~l~~s~~~~f~~~~~~~~~~~~~R~efigr-~g~~~~Pqa--- 494 (1056)
T COG3459 422 YYEWVLGNIRSRTTNFQV---SEPDGGTKILVSGNPYSLDYSEQVAFGALEEDATSFTEDRDEFIGR-YGDEHAPQA--- 494 (1056)
T ss_pred hhhhhcccchhccccccc---cccccccceeeccCccCccchhhheeeccccCccccccchhhhhcc-CCcccCchh---
Confidence 999999965554444432 344555667777666665556667777766543333 334445432 222333332
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCCeeEEEEEEeEecCCCEEEEEEEEeeeCCcccccchhhhhcccccccCCcchHHHHH
Q 038924 315 EIKKHGSFDHLDNDKTSPSEPGSSIGAAIAASLTIPSGSTRSVTFSLAWDCPEVKFFEKVYHRRYTKFYGTLGDSAARIA 394 (920)
Q Consensus 315 ~f~~~G~l~~~~~~~~~~s~~g~~~~aAva~~~~l~pge~~tv~F~LaW~~P~~~f~g~~~~rrYt~~f~~~~~~a~~~a 394 (920)
...+.|.+ ....+.++|+|+...++|+||+.+++.|+|+-- -+-. ..+....+|. . ..-.+.+
T Consensus 495 --v~~~~ls~-------sve~~~dpcaa~~~~i~l~pge~~~~~filG~~-~n~~-~ak~~~e~~~----~--~~~~e~~ 557 (1056)
T COG3459 495 --VIAAALSN-------SVESGYDPCAALAQDIELQPGEARELVFILGDV-DNPE-QAKALIEKLR----T--AEFVEAA 557 (1056)
T ss_pred --heeccccC-------ccccccCchhhhhheeEecCCceeEEEEEEccC-CCHH-HHHHHHHHhc----c--hhHHHHH
Confidence 11244444 366788999999999999999999999999962 2211 2334444443 2 1123344
Q ss_pred HHHHHHHHHHHHHHHhhcccccccCCCCCcchhhhhhh-hhhhccCceeeecCCCCccchhhhhhhccccCCCCcccCCC
Q 038924 395 HDAILEHAKWECEIEAWQRPILEDKRFPEWYPITLFNE-LYYLNAGGTIWTDGSPPMQSLATIRERKFSLDTPSKIHTPA 473 (920)
Q Consensus 395 ~~al~~~~~w~~~i~~wq~pil~d~~lPdwy~~alfNe-Lyyl~~gg~iW~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~ 473 (920)
+.+++.+ |.+.+..+| +.+||--.+.++|. +.|+...|.+|.+
T Consensus 558 l~~~ra~--w~~f~~~~q------v~Tpde~lN~mvN~W~~yQal~c~~~sR---------------------------- 601 (1056)
T COG3459 558 LAEIRAY--WDDFLGQFQ------VETPDEKLNHMVNHWLPYQALTCRIWSR---------------------------- 601 (1056)
T ss_pred HHHHHHH--HHhhheEEE------ecCccHHHHHHHHHHhhhhhheeEeccc----------------------------
Confidence 5555554 999999999 45798888999988 8899999999965
Q ss_pred CCCccccccccccCccccC-ceeeecCcccccccccccchhHHHHHHhhcHHHHHHHHHHHHHHhhccCCCceeeecCCc
Q 038924 474 SSDTALGTRLLENGEENIG-QFLYLEGAEYVMYNTYDVHFYSSFALVMLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGK 552 (920)
Q Consensus 474 ~~~~~~~t~~~~~~~~~~G-~F~~~Eg~ey~~~nT~DV~fYas~al~~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~ 552 (920)
+.|+|++ | .|++++..+ | .+++++..|+++|.++.+.++.|..+. -++||+.+.
T Consensus 602 -------~a~yQ~s----G~A~GfRD~~Q-------d-----~l~f~~~~p~~aR~qIl~~as~Qf~eG--d~~hWf~p~ 656 (1056)
T COG3459 602 -------HAFYQES----GAAFGFRDQLQ-------D-----TLEFLLARPALARKQILDAASRQFVEG--DVQHWFLPD 656 (1056)
T ss_pred -------chhhccc----cceeccccccc-------c-----chhhhhcCHHHHHHHHHHHHhhcccCC--Ccccccccc
Confidence 4577765 6 888888877 8 588888899999999997777665442 234443321
Q ss_pred chhcccCCCCccCCCCCCCCcccccccccCcccccccchHHHHHHHHHHHHhCCHHHHH-------------------HH
Q 038924 553 WVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLNSKFVLQVYRDFVATGDKNFAR-------------------AV 613 (920)
Q Consensus 553 ~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n~~fil~v~ry~~~TGD~~fL~-------------------~~ 613 (920)
.. .|. .-...+.|+.+| .+.++..|.+.|||.++|+ .+
T Consensus 657 t~-----------ag~------qir~~~sDdvvW------l~~a~~~Yl~~TGD~aILdE~iPf~~~~~l~~~s~e~~TL 713 (1056)
T COG3459 657 TY-----------AGV------QIRTSISDDVVW------LLKAIADYLKETGDAAILDEVIPFIDGPALPEFSKEQATL 713 (1056)
T ss_pred cc-----------ccc------hhhcccCCceee------eHHHHHHHHHhcCcHhhhhccccccCCCccccccccchhH
Confidence 11 110 024567899999 6999999999999999993 56
Q ss_pred HHHHHHHHHHHH-hhCCCCCCCccCCCCCCCccCCcCc-----cchhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 038924 614 WPSVYIAMAYME-QFDKDGDGMIENEGFPDQTYDAWSA-----NGVSAYCGGLWVAALQAASALANDVGDHASASYFWVR 687 (920)
Q Consensus 614 ~p~v~~al~~l~-~~d~d~dGL~e~~G~~d~t~D~w~~-----~G~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~ 687 (920)
|+||++|++... ++.+ +|||...| .| +.|+... .|+|++++++...+|+.+.++|+.+|+.+++.+|.+.
T Consensus 714 yEH~~rAld~av~r~g~--~glpli~g-GD-WND~ln~vg~~g~geSv~lgW~l~~tlq~F~~lak~r~d~~r~~~~~~~ 789 (1056)
T COG3459 714 YEHCARALDLAVARLGP--HGLPLILG-GD-WNDGLNLVGNGGKGESVWLGWFLALTLQTFKELAKARGDEARADTWAKH 789 (1056)
T ss_pred HHHHHHHHHHHHHhcCC--CCcccccC-Cc-ccccccccccCCccceeehhhHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 999999999985 6777 89998765 44 6666543 4899999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-hccCCeee---EcCCC---CCCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhcccccc--
Q 038924 688 YQKAKAVYDS-LWNGSYFN---YDNSD---GSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYDFNVLKVK-- 758 (920)
Q Consensus 688 a~~~k~~~~~-lWng~yy~---~D~~~---~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~-- 758 (920)
++.+++++++ .|||+||+ +|++. +..++.|.++.| +|.|++++| ..+++++++||++|+++++.++.
T Consensus 790 ~ea~~~~~~~~~wDg~wy~r~~~d~g~~lgs~e~~E~qI~~i-~qs~sVlSg---~gd~~ra~kaMd~v~k~L~~pdgvr 865 (1056)
T COG3459 790 VEALREALETNGWDGEWYRRGYGDDGTPLGSPEDEECQIDSI-PQSWSVLSG---EGDKERAEKAMDSVMKYLVDPDGVR 865 (1056)
T ss_pred HHHHHHHHHhcCCCcceEEeccccCCCcccCCCCcccceeee-ccchhhhhC---CCChHHHHHHHHHHHHhccCccccE
Confidence 9999999999 99999988 34332 346778999985 699999999 68999999999999999997652
Q ss_pred -------------CCccccccccCCCCcccCCCCccC-CCcchHHHHHHHHHHHcCCHHHHHHHHHHH
Q 038924 759 -------------GGMCGAMNGMQPDGRIDMSGLQAR-EIWPGVTYGLAASMIQEEMVDMAFQTAAGV 812 (920)
Q Consensus 759 -------------~g~~G~~~g~~p~G~~~~~~~~s~-~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i 812 (920)
+++.++++|+|++| .+|+| .+|. ..+|.++|+.++|+++++.+
T Consensus 866 L~tppf~~~~~~~gyiK~y~pgvREnG-----gQYtHa~~w~------i~Alak~G~a~eAw~~f~~i 922 (1056)
T COG3459 866 LFTPPFSYTKGDPGYIKRYPPGVRENG-----GQYTHAATWV------ILALAKMGRADEAWELFDKI 922 (1056)
T ss_pred ecCCcccccCCCCCeeecCCccccccc-----ceeecccHHH------HHHHHhhccHHHHHHHHHhc
Confidence 35677888888887 67788 7885 34566899999999998864
No 6
>TIGR01577 oligosac_amyl oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (PubMed: 11549021), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Probab=99.96 E-value=1.7e-24 Score=261.26 Aligned_cols=566 Identities=15% Similarity=0.144 Sum_probs=337.8
Q ss_pred eeecCCCCeEEEEEeCCCCccccccCCCcEEEEEcCCCceeeEEeCCCCCCCCCcCCCCCCcccccccCCCCcceEEecc
Q 038924 99 IGRSYRGEFQRFKLFHGICDDAPVLANQFSVFVSRPNGEKFSSVLCPRSPGVPKKNTDSGIESWDWNLKGENCTYHALFP 178 (920)
Q Consensus 99 i~~~~~G~f~~w~l~~g~~~~~~v~an~F~~~v~~~~g~~~~~vL~~~~~~~~~~~~~~~l~~w~w~~~~~~~~Y~~lyP 178 (920)
|.++.+|.+...- .|....++.+..++|.|+. +..|.+... ..| . ....|.+.+.
T Consensus 3 ~~~d~~g~i~~~y-yP~v~~~~~~~~~~~~v~~----~~~f~~~~~---------------~~~--~---~~~~y~~~~~ 57 (616)
T TIGR01577 3 AVLGRYGEIHRLF-YPQKDYAQHVNRSSAGVLI----PKGVWWFHD---------------PDW--K---HEQTYIEDTN 57 (616)
T ss_pred EEECCCceEEEEe-CCCCChhHhhccceeEEEE----CCeeEEecC---------------CCC--c---eeeeEecCcc
Confidence 5677777766642 3544433433345577662 344666332 112 1 1236899999
Q ss_pred ceEEEEeecCCCCeEEEEEEEcccccCCCCCCCCCEEEEEEEEEeCCCCeEEEEEEEEeccccCCCCCCCCcccccceec
Q 038924 179 RAWTVYDGEPDPELRIVCRQISPFIPHNYKESSFPASVFTFTLSNSGQTSADVTLLFTWANSVAGDSGLSGHHFNSKTMT 258 (920)
Q Consensus 179 ~a~t~y~~~~~~~i~v~~~~~SP~IP~d~kdSSlPv~vf~~~v~N~~~~~~~vsl~~~~~n~~G~~~~~~~~~~n~~~~~ 258 (920)
..+++++ .... ++++++-|+| .+ .+|.+..++|+|.++++++++++++.+..++..... |..+..
T Consensus 58 ~~~~~~~-~~~~-~~~~~~~fv~---~~-----~~~~~~~v~i~n~~~~~~~l~lf~~~~~~l~~~~~~-----n~a~~~ 122 (616)
T TIGR01577 58 ILRTTLT-CDEW-IEVVIEDEVV---SG-----RNVLIRRYVITNCGEEKIPLKFFSYTNFHMGEMKRY-----NTTLFV 122 (616)
T ss_pred EEEEEEE-cCCc-eEEEEeeeec---Cc-----cceEEEEEEEEcCCCCcceeEEEEEeccccCCCCCC-----ceEEEc
Confidence 9999998 4444 9999999655 35 499999999999999999999999988666632211 211111
Q ss_pred ccCceeEEEeeccCCCCCCceEEEEEecCCCe-EEEeeCccccCCCCCccchHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q 038924 259 KDGVHGLTLHHRTANGRPPVTFAVAAEETADV-HVSECPCFLLSGNSKGITAKDMWNEIKKHGSFDHLDNDKTSPSEPGS 337 (920)
Q Consensus 259 ~~~~~Gv~l~~~~~~~~~~~~~aiaa~~~~~v-~vt~~~~f~~~~~~~~~~~~~~W~~f~~~G~l~~~~~~~~~~s~~g~ 337 (920)
. ...++.+.+. ...+++ ...+.+ ..++. +. +. ..+.|.+. ++|+|+.. +...|.
T Consensus 123 ~--~~~~l~~~~~-----~~~~~~--~~~~~~~~~~~G--~~--~~-----~~~~~~~~-~~g~l~~n------~~~~g~ 177 (616)
T TIGR01577 123 G--KKEALVHYRR-----EYAVAI--GSVLPTTRFQAG--SN--KD-----KTSAYIDI-EQGLLNCN------KEDIGM 177 (616)
T ss_pred C--CCCEEEEEcC-----CEEEEE--ecCCCcceeeec--CC--cc-----ccchHhHH-hCCccCCC------cccccc
Confidence 1 1123333321 122333 222222 22211 10 00 12455665 89998543 344566
Q ss_pred CeeEEEEEEeEecCCCEEEEEEEEeeeCCcccccchhhhhcccccccCCcchHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 038924 338 SIGAAIAASLTIPSGSTRSVTFSLAWDCPEVKFFEKVYHRRYTKFYGTLGDSAARIAHDAILEHAKWECEIEAWQRPILE 417 (920)
Q Consensus 338 ~~~aAva~~~~l~pge~~tv~F~LaW~~P~~~f~g~~~~rrYt~~f~~~~~~a~~~a~~al~~~~~w~~~i~~wq~pil~ 417 (920)
..++|++..++|+||+++++.|+|+.. ...-..+...++|.+ . ..+.+.....+| |++.+..-. .
T Consensus 178 ~~~~al~~~l~l~p~~~~~~~~~lg~g--~~~~~a~~~~~~~~~----~---~~~~~~~~~~~~--W~~w~~~~~--~-- 242 (616)
T TIGR01577 178 HTDGACLWELGLCPPGSKCFTIFFAFG--KTVEKALEELEELRT----L---GFERIRSQTLAD--WEAYFGQAK--P-- 242 (616)
T ss_pred eecceEEEEEEECCCCeEEEEEEEEEC--CCHHHHHHHHHHHHh----c---CHHHHHHHHHHH--HHHHHhcCC--c--
Confidence 667899999999999999999999962 111133444444432 1 144444445554 776666321 0
Q ss_pred cCCCCCcchhhhhhhhhhhccCceeeecCCCCccchhhhhhhccccCC-CCcccCCCCCCccccccccccCccccCceee
Q 038924 418 DKRFPEWYPITLFNELYYLNAGGTIWTDGSPPMQSLATIRERKFSLDT-PSKIHTPASSDTALGTRLLENGEENIGQFLY 496 (920)
Q Consensus 418 d~~lPdwy~~alfNeLyyl~~gg~iW~~~~~~~~~~~~~~~~~f~l~~-~~~~~~~~~~~~~~~t~~~~~~~~~~G~F~~ 496 (920)
...|+.-.+.-.-++|.-+. . ..+..... +..+.++ .+. +..+.+
T Consensus 243 -~~~~~~~~~~~~~~~~~~Sl---------------l---~Lk~~~~~~~GaiiAs---~s~-~~~~~~----------- 288 (616)
T TIGR01577 243 -VQTPCLEMDNKIYSLYRRSL---------------A---VLRLLTDGEYGSMIAA---PEF-DEDFVR----------- 288 (616)
T ss_pred -CCCcccccchHHHHHHHHHH---------------H---HHHhccCCCCCcEEEc---CCC-Cccccc-----------
Confidence 12231100100002222000 0 00000000 0011111 110 000111
Q ss_pred ecCcccc-cccccccchhHHHHHHhh-cHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcc
Q 038924 497 LEGAEYV-MYNTYDVHFYSSFALVML-FPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFE 574 (920)
Q Consensus 497 ~Eg~ey~-~~nT~DV~fYas~al~~l-~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~ 574 (920)
...|+ +|. -|-. +.++||+.+ .|+.++..++.+++.|..+..-..++..+|. ..||.
T Consensus 289 --~~~Y~y~W~-RD~~-~~a~Al~~~G~~~~a~~~l~~l~~~q~~~G~~~~~~~~dG~----------------~~~~~- 347 (616)
T TIGR01577 289 --CGGYAYCWG-RDAS-YIATALDRAGYHDRVDRFFRWAMQTQSRDGSWQQRYYLNGR----------------LAPLQ- 347 (616)
T ss_pred --CCCCceecc-ccHH-HHHHHHHHCCCHHHHHHHHHHHHHhhCcCCCcceEEecCCC----------------CCCCC-
Confidence 11243 331 2322 235899988 9999999999998887533211222222221 11211
Q ss_pred cccccccCcccccccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hCCCCCCCccCCCCCCCccCCcCc-cc
Q 038924 575 INSYNLFNSSRWKDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ-FDKDGDGMIENEGFPDQTYDAWSA-NG 652 (920)
Q Consensus 575 ~~~y~~~D~~~W~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~-~d~d~dGL~e~~G~~d~t~D~w~~-~G 652 (920)
+..+ .|.....++++++|++.|||.+|++++||+++++++|+.. ++. +++. ...|.|+. .|
T Consensus 348 ---~~~Q-----~D~~g~~l~al~~y~~~t~d~~~~~~~~~~v~~a~~fl~~~~~~---~l~~------~~~~lWEer~G 410 (616)
T TIGR01577 348 ---WGLQ-----IDETGSILWAMDQHYRLTNDRAFLEEIWESVQKAAQYLILFIDP---ETPL------PCRDLWEEREG 410 (616)
T ss_pred ---CCcc-----ccchhHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhccC---CCCC------CCCccceecCC
Confidence 0122 4666667889999999999999999999999999999865 443 3543 24567875 58
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccC--Ceee--EcCCCCCCccccccccchhhHH
Q 038924 653 VSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNG--SYFN--YDNSDGSSSTSIQADQLAGQWY 727 (920)
Q Consensus 653 ~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng--~yy~--~D~~~~~~~~~i~~dql~Gq~~ 727 (920)
.++|+.+++|+||+++++||+.+|+++.+++|++.++++++.|++ +|++ ++|. ++... .++.+.++ +++ .
T Consensus 411 ~~~~t~a~~~aAL~~aa~lA~~lGd~~~a~~~~~~Ad~ik~~i~~~~w~~~~g~F~~~~~~~~--~~~~vDaS-lL~--l 485 (616)
T TIGR01577 411 VFTYTASAVYGGLDAAAAVADKLGEKRLAQNWKKAAEFIKRAVEERFWLPERQVFAKGIKLMV--LDKTIDIS-ILG--I 485 (616)
T ss_pred ccCccHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeecCCC--CCCcccHH-HHh--H
Confidence 999999999999999999999999998899999999999999999 9975 3665 44321 22233322 211 1
Q ss_pred HHHhCCCCCCCHHHHHHHHHHHHHhccccccCCccccccccCCCCcccCCCCccCCCcchHHHHHHHHHHHcCCHH----
Q 038924 728 ARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNGMQPDGRIDMSGLQAREIWPGVTYGLAASMIQEEMVD---- 803 (920)
Q Consensus 728 a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~g~~p~G~~~~~~~~s~~vW~g~~y~lAa~mi~~G~~e---- 803 (920)
+.-.|+-+ .+++++.++|+.|.+.+..+..+|...+..+ .++.+++|+..|+++|..+++.|..+
T Consensus 486 ~~~~g~l~-~~Dpr~v~Tv~~I~~~L~~~~~ggi~RY~~D----------~y~~g~~w~i~T~wla~~~~~~g~~~~~~~ 554 (616)
T TIGR01577 486 SVPFNLIA-PDDERMVKMAEAIEKHLTSPIVGGIKRYEND----------PYVGGNPWILTTLWLSQLYIKQGRILKALN 554 (616)
T ss_pred HHhcCCCC-CCChHHHHHHHHHHHHhcccCCCeeeCCCCC----------CCCCCCcHHHHHHHHHHHHHHhcccccccc
Confidence 12256432 4567888899999998865433333222221 23445899999999999999998765
Q ss_pred ---------HHHHHHHHHHHHhhhcCCCCCCCCCCcCccCC-CCC
Q 038924 804 ---------MAFQTAAGVYEVAWSEDGLGYSFQTPESWNNN-DEY 838 (920)
Q Consensus 804 ---------eA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~-~~~ 838 (920)
+|.++++++..+. +. .|+ .||+++.. +.+
T Consensus 555 ~~~~~~~~~~A~~ll~~~~~~~-~~--~Gl---l~Eqvd~~~g~~ 593 (616)
T TIGR01577 555 HNGADIYLQKSKKLLKWVMDHR-TD--LGL---LPEQVDKETGKP 593 (616)
T ss_pred cchhhhHHHHHHHHHHHHHhcC-CC--CCC---CccccCCCCCCC
Confidence 9999999999987 55 675 99999974 444
No 7
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=99.95 E-value=4.9e-26 Score=258.23 Aligned_cols=293 Identities=22% Similarity=0.363 Sum_probs=215.7
Q ss_pred HHHHhhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccccccchHHHH
Q 038924 516 FALVMLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLNSKFVL 595 (920)
Q Consensus 516 ~al~~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n~~fil 595 (920)
+.|....|+.++++|..|+..+. .|.+||.+... ..+.|+++|..+| ||+
T Consensus 42 l~l~~~~~~~a~~~L~~~~~~~~--------------------~G~ipn~~~~~----~~~~Y~s~Dat~w------fl~ 91 (370)
T PF06202_consen 42 LLLSPGRFEEARNILATFAGTQR--------------------HGLIPNELRDG----EEPRYNSVDATLW------FLI 91 (370)
T ss_pred HHhCCCcHHHHHHHHHHHHHhhh--------------------cCcccCcccCC----CCCCCCCCccHHH------HHH
Confidence 34556678999999999998762 57889887541 2368999999988 999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-----hCCC-CCCCccCCC-CCCCc-----cCCcCcc---chhhHHHHH
Q 038924 596 QVYRDFVATGDKNFARAVWPSVYIAMAYMEQ-----FDKD-GDGMIENEG-FPDQT-----YDAWSAN---GVSAYCGGL 660 (920)
Q Consensus 596 ~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~-----~d~d-~dGL~e~~G-~~d~t-----~D~w~~~---G~say~~~l 660 (920)
++++|+++|||.+||+++||.++++|+++.+ .+.| +|||+..+. ...+| ++++.++ |..+.+++|
T Consensus 92 ~l~~Y~~~t~D~~~l~~~~~~i~~il~~~~~g~~~~~~~d~~~gl~~~~~~~~~~tWmD~~~~g~~~tpr~g~~vEIqal 171 (370)
T PF06202_consen 92 ALQEYYRWTGDYSFLRELYPAIEEILEWYADGTDFGIRVDPEDGLIYSGNGLNNQTWMDARNDGRPVTPRDGAAVEIQAL 171 (370)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCeeecCCCCCCCCccccccCCccccCCCCcchHHHHH
Confidence 9999999999999999999999999999753 2245 689998431 12233 3344443 567899999
Q ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCC--eee--EcCCCCCCccccccccchhhHHHHHhCCC-
Q 038924 661 WVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNGS--YFN--YDNSDGSSSTSIQADQLAGQWYARACGLL- 734 (920)
Q Consensus 661 ~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~--yy~--~D~~~~~~~~~i~~dql~Gq~~a~~~GL~- 734 (920)
||+||+.+++||+..+++ .+.+|++.++++|++|++ ||+.+ ||. .|..+ ..+.++++||+. ++.|+
T Consensus 172 ~y~AL~~~~~la~~~~~~-~a~~~~~~A~~lk~~F~~~FW~~~~g~~~d~ld~~~-~~d~~irpN~~~------a~~L~~ 243 (370)
T PF06202_consen 172 WYNALRFAAELAEKFGDE-LAARYREWAERLKESFEKRFWDEDRGYYADALDGDK-EPDDSIRPNQLI------ALSLPP 243 (370)
T ss_pred HHHHHHHHHHHHhhcCCc-hHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEecCCC-CCCcccccCchh------HHhcCC
Confidence 999999999999988877 789999999999999999 99854 444 34332 256689999975 23343
Q ss_pred CCCCHHHHHHHHHHHHHhccccccCCcccccc---ccCC--CCc--ccCCCCccCCCcchHHHHHHHHHHHcCCH-HHHH
Q 038924 735 PIADEAKVKKALTKIYDFNVLKVKGGMCGAMN---GMQP--DGR--IDMSGLQAREIWPGVTYGLAASMIQEEMV-DMAF 806 (920)
Q Consensus 735 ~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~---g~~p--~G~--~~~~~~~s~~vW~g~~y~lAa~mi~~G~~-eeA~ 806 (920)
.++++++++++|+.+.+.+++++ |...+-+ .++| .|. .+..++|+|+|||+.+-..+.++++.|.. +++.
T Consensus 244 ~~l~~~~a~~vl~~~~~~L~tp~--GlRTLs~~~~~Y~p~y~g~~~~rd~sYHnGsvWpw~~g~~~~al~r~g~~~~~~~ 321 (370)
T PF06202_consen 244 GLLDPEQAKKVLDRVEEELLTPW--GLRTLSPSDPRYNPIYEGDQDSRDMSYHNGSVWPWDNGIYAEALLRYGFDEEEAI 321 (370)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCC--chhcccCCCCCcCCCCCCccccCcccccCCCcCcCcHHHHHHHHHHhCccchHHH
Confidence 58999999999999988888653 2222111 1222 121 12247999999999999999999999983 5555
Q ss_pred HHHHHHH----HHhhhcCCCCCCCCCCcCccCCCCCCccccc--hhhHHHHHHHHH
Q 038924 807 QTAAGVY----EVAWSEDGLGYSFQTPESWNNNDEYRSLCYM--RPLTIWAMQWAL 856 (920)
Q Consensus 807 ~~~~~i~----~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~--r~~a~w~~~~Al 856 (920)
+.++.+. ++. .+. + ..+.||.||+++. +|. .+.++||+-.-|
T Consensus 322 ~~~~~ll~~~~~~~-~~~--~-~~~lpEl~dg~~~----~~p~gc~~QAWS~a~il 369 (370)
T PF06202_consen 322 REAKSLLEGFEEHL-QEF--G-LGRLPELFDGDPP----HYPRGCSPQAWSVAEIL 369 (370)
T ss_pred HHHHHHHHHHHHHH-hhc--c-CCCcchhcCCCCC----CCCCCCHHHHHHHHHhh
Confidence 5555444 455 332 3 5689999998863 333 389999987654
No 8
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.9e-22 Score=237.85 Aligned_cols=299 Identities=22% Similarity=0.330 Sum_probs=222.8
Q ss_pred cccchhHHHHHHhh-cHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccc
Q 038924 508 YDVHFYSSFALVML-FPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRW 586 (920)
Q Consensus 508 ~DV~fYas~al~~l-~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W 586 (920)
-|.. .+..+++++ .||+||++|+.|+++. + +|.|||.+....|. .+.|++.|+..|
T Consensus 287 RD~l-IS~lgll~~g~~elArg~L~~~a~~~---~-----------------~GkIPhe~~~~~~~--~~~Y~tvD~t~~ 343 (641)
T COG3408 287 RDTL-ISALGLLLVGRFELARGTLNTLARYS---E-----------------PGKIPHEILLSIPG--EPYYNTVDATPL 343 (641)
T ss_pred hHHH-HHHHHHHhcCCHHHHHHHHHHHHhhc---c-----------------CCCCcchhhhcCCC--cceeccCCCcHH
Confidence 3543 345778888 9999999999999972 1 68899997432222 258999988888
Q ss_pred cccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-----hCCCCCCCccCCCCCCCccC----CcCcc---chh
Q 038924 587 KDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ-----FDKDGDGMIENEGFPDQTYD----AWSAN---GVS 654 (920)
Q Consensus 587 ~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~-----~d~d~dGL~e~~G~~d~t~D----~w~~~---G~s 654 (920)
||+++.+|+++|+|.+|++++||.+..+++|+.+ ++.+++|+++. |.+-.+.| .|.+. |..
T Consensus 344 ------~i~~~~~y~~~t~d~~~i~e~~~~v~~a~d~~~~~~~~~~~~~~~~l~~~-~~~~tW~Ds~~~~~~~~~~~g~p 416 (641)
T COG3408 344 ------FIYLLGAYLKYTGDTEFIRELWPSVGAALDWILKGFDFGFDTYGDGLLEG-GSNQTWMDSGDDIFAVTPRAGKP 416 (641)
T ss_pred ------HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhcCCccceecCcccccC-CCCCCCeecCCccccccCCCCCc
Confidence 9999999999999999999999999999999853 45788999983 22222334 44444 557
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccC-CeeeE-cCCCCCCccccccccchhhHHHHHh
Q 038924 655 AYCGGLWVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNG-SYFNY-DNSDGSSSTSIQADQLAGQWYARAC 731 (920)
Q Consensus 655 ay~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng-~yy~~-D~~~~~~~~~i~~dql~Gq~~a~~~ 731 (920)
+-++++|+.+|+++..+|..+++.+.++++.+.++++++.|++ ||++ .||.. +++ .+..|+++++.+ ..+..+
T Consensus 417 i~i~al~~~~~~a~~~~a~ll~~~~~~~~~~~~a~~l~~~F~~~fw~~~~f~dl~~~~---~~~~~r~~~~~a-~~l~~~ 492 (641)
T COG3408 417 VAINALQYYALKAALRLANLLGDEEDAARLEKIARRLKESFEAKFWNPTGFYDLALDD---KDVPIRPNFSNA-IHLLYT 492 (641)
T ss_pred eeHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHhhCccchHhhhccC---CCcccCccceec-cccccc
Confidence 8899999999999999999999888899999999999999999 9997 46652 221 233455554431 122244
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccccccCCccccccccC---CCCc-ccCCCCccCCCcchHHHHHHHHHHHcCCHH-HHH
Q 038924 732 GLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNGMQ---PDGR-IDMSGLQAREIWPGVTYGLAASMIQEEMVD-MAF 806 (920)
Q Consensus 732 GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~g~~---p~G~-~~~~~~~s~~vW~g~~y~lAa~mi~~G~~e-eA~ 806 (920)
| +++++++ .+++.+.+.++++ +|+| |+.. -+...+|+++|||+++..++.++.+.|..+ +++
T Consensus 493 g---i~~~~~~-~~~~l~e~~lltp---------~GlRTLS~~dp~Y~p~yYH~GtVWP~~~gifv~g~~r~G~~~~~~~ 559 (641)
T COG3408 493 G---IVDPERA-VIIRLAEEDLLTP---------WGLRTLSPDDPRYNPMYYHNGTVWPHDTGIFVLGLRRYGLKDIQAL 559 (641)
T ss_pred c---cCchHHH-HHHHHHHHhccCC---------ccccccCCCCCCcCCCcccCCCcccchHHHHHHHHHHcCcccHHHH
Confidence 4 6777777 6777666666653 3444 2221 122246999999999999999999999988 999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCcCccCCCC--CCccccchhhHHHH-------HHHHHcCCCCccc
Q 038924 807 QTAAGVYEVAWSEDGLGYSFQTPESWNNNDE--YRSLCYMRPLTIWA-------MQWALTKPKLSRQ 864 (920)
Q Consensus 807 ~~~~~i~~~~~~~~g~G~~~~~PE~~~~~~~--~r~~~Y~r~~a~w~-------~~~Al~g~~~~~~ 864 (920)
+++++++..+ . .++.||.||+... ++++ .+++|| +.+.+.|.++++.
T Consensus 560 ~~~~~~~~~a-~------~~~~pE~f~g~~~~~P~gc----~~QAWS~a~~l~~~~~~~lg~~p~~~ 615 (641)
T COG3408 560 ELFDGLFSSA-S------PGRIPELFDGDSPNRPKGC----YPQAWSSAEILRSLLQGLLGIKPDGF 615 (641)
T ss_pred HHHHHHhhhc-c------cCCCcccccccCCCCCCCc----chhhhhHHHHHHHHHHHHhCCCcCcc
Confidence 9999999776 2 3467999999753 3344 566665 6667788888776
No 9
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative. The seed for this model is composed of two uncharacterized archaeal proteins from Methanosarcina acetivorans and Sulfolobus solfataricus. Trusted cutoff is set so that essentially only archaeal members hit the model. The notable exceptions to archaeal membership are the Gram positive Clostridium perfringens which scores much better than some other archaea and the Cyanobacterium Nostoc sp. which scores just above the trusted cutoff. Noise cutoff is set to exclude the characterized eukaryotic glycogen debranching enzyme in S. cerevisiae. These cutoffs leave the prokaryotes Porphyromonas gingivalis and Deinococcus radiodurans below trusted but above noise. Multiple alignments including these last two species exhibit sequence divergence which may suggest a subtly different function for these prokaryotic proteins.
Probab=99.86 E-value=1.5e-20 Score=221.65 Aligned_cols=233 Identities=20% Similarity=0.194 Sum_probs=174.7
Q ss_pred HHHhhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccccccchHHHHH
Q 038924 517 ALVMLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLNSKFVLQ 596 (920)
Q Consensus 517 al~~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n~~fil~ 596 (920)
.|..-.++.++.+|+.|++.+. .|++|+.+.+.. ..+.|+++|.++| ||++
T Consensus 306 ~l~tgr~~~A~~iL~~fa~~~~--------------------~GliPN~~~~~g---~~p~YntvDAtLW------fi~a 356 (575)
T TIGR01561 306 LLIDKQFDEAKEAILKFANLCK--------------------RGLIPNNFIAFG---GDPIYNGVDASLW------AIHA 356 (575)
T ss_pred HhcCCcHHHHHHHHHHHHHHhH--------------------CCCCCCccCCCC---CCccCCCchHHHH------HHHH
Confidence 3345689999999999999862 577888653310 1258999999999 9999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHhh-----CCCCCCCccCCCCCCCccCC----cC---ccchhhHHHHHHHHH
Q 038924 597 VYRDFVATGDKNFARAVWPSVYIAMAYMEQF-----DKDGDGMIENEGFPDQTYDA----WS---ANGVSAYCGGLWVAA 664 (920)
Q Consensus 597 v~ry~~~TGD~~fL~~~~p~v~~al~~l~~~-----d~d~dGL~e~~G~~d~t~D~----w~---~~G~say~~~l~~aA 664 (920)
+++|++.|||.++++++||.++.+|++.... ..|.|||+.. |.+..+.|. |. ..|..+++|+|||+|
T Consensus 357 l~~Y~~~tgD~~~l~~l~p~l~~ii~~y~~G~~~~i~~d~dGLi~~-g~~lTWMDa~~g~~~~tPR~G~~VEInALwYnA 435 (575)
T TIGR01561 357 IDKTFAYSQDFLFIRDVVDKVLDIIDNYCAGNDFAIGMDNDLIFHK-GAPLTWMDAKVDERAVTPRAGAACEINALWYNA 435 (575)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCcEEEECCCccEeC-CCCCCCCCCCCCCccCCCCCCccHHHHHHHHHH
Confidence 9999999999999999999999999976431 2456798863 444445663 33 457899999999999
Q ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCC-eeeEcCCC--C----CCccccccccchhhHHHHHhCCC-C
Q 038924 665 LQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNGS-YFNYDNSD--G----SSSTSIQADQLAGQWYARACGLL-P 735 (920)
Q Consensus 665 L~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~-yy~~D~~~--~----~~~~~i~~dql~Gq~~a~~~GL~-~ 735 (920)
|+.+++|++.+|+. +..|+++|+++|++|++ ||+++ -|.||..+ . ..+.+++++||+ +++|+ +
T Consensus 436 L~~~a~la~~~g~~--a~~y~~~A~~lk~~F~~~FW~~~~g~l~D~v~~d~~~~~~~d~s~RPNql~------A~sL~~~ 507 (575)
T TIGR01561 436 LKTAEFLGNELGED--AESLEEKAAGVAKNFAEKFINPDGNCLFDLIHQDEAGNQVKDKAIRPNQIF------AISLPFP 507 (575)
T ss_pred HHHHHHHHHHhCcc--HHHHHHHHHHHHHHHHHhcCCCCCCeeEEEEecCCCCCcccccccCCCcee------HhhCCCC
Confidence 99999999999985 57899999999999999 99865 34444221 1 136789999997 55665 5
Q ss_pred CCCHH-HHHHHHHHHHHhccccccCCcccccc---ccCC--CCcc--cCCCCccCCCcchHH
Q 038924 736 IADEA-KVKKALTKIYDFNVLKVKGGMCGAMN---GMQP--DGRI--DMSGLQAREIWPGVT 789 (920)
Q Consensus 736 i~~~e-~~~saL~~v~~~nv~~~~~g~~G~~~---g~~p--~G~~--~~~~~~s~~vW~g~~ 789 (920)
+++++ +++++++.+.+.+++++ |.+-+-+ ..+| .|.. +..++|+|+||++..
T Consensus 508 ll~~~~~~~~vl~~v~~~Lltp~--GlRTLsp~d~~Y~p~Y~g~~~~Rd~aYHqGtvWpwl~ 567 (575)
T TIGR01561 508 IIDDESIAKAILDLIEKDLLRPF--GLKSLSRDDPLYKGQYKGDALSRDTAYHNGSLPPWLH 567 (575)
T ss_pred CCCHHHHHHHHHHHHHhhccCCc--ccccCCCCCCCcCCCCCCCccccCCcCcCCCcCccch
Confidence 89999 99999999999999764 2221111 1111 1211 234899999999874
No 10
>PRK10137 alpha-glucosidase; Provisional
Probab=99.84 E-value=2.7e-19 Score=214.67 Aligned_cols=303 Identities=15% Similarity=0.201 Sum_probs=206.6
Q ss_pred cccccccchhHHHHHHhhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCc
Q 038924 504 MYNTYDVHFYSSFALVMLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNS 583 (920)
Q Consensus 504 ~~nT~DV~fYas~al~~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~ 583 (920)
+|+ .|..|-| ++++++.|++++..|+.+++.|.+.++..+ + ...|+|||-+-...+ ..+.+ +.
T Consensus 347 ~W~-WDS~~~A-~~la~fdpelA~~~lr~Lf~~Q~~~~d~~r---------~-~~~G~Iph~vf~~~~---p~R~g--~~ 409 (786)
T PRK10137 347 TWP-WDTWKQA-YAMAHFNPDVAKENIRAVFSWQIQPDDSVR---------P-QDVGFVPDLIAYNLS---PERGG--DG 409 (786)
T ss_pred ccc-hHHHHHH-HHHhhcCHHHHHHHHHHHHHhhccccCCCC---------c-CCCCeeeEEeccCCC---ccccc--cc
Confidence 555 7888776 999999999999999988888855432111 1 236888987732100 00000 01
Q ss_pred cccccc---chHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hhCCCCCCCccCCCC-------------------
Q 038924 584 SRWKDL---NSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYME-QFDKDGDGMIENEGF------------------- 640 (920)
Q Consensus 584 ~~W~D~---n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~-~~d~d~dGL~e~~G~------------------- 640 (920)
..|... .|.+.++|.++|+.|+|.+||++|||++.++.+|+. ..|.|+|||+++...
T Consensus 410 ~~~ne~~tqPPL~a~av~~vy~~t~d~~fl~~lyPkL~a~h~Ww~~~RD~dg~Gl~eY~~~~~~~h~~~~g~~~~~i~~~ 489 (786)
T PRK10137 410 GNWNERNTKPSLAAWSVMEVYNVTQDKAWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKG 489 (786)
T ss_pred ccccCCCcCcCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCCCCceeEeeccccccccccccccccccccc
Confidence 123211 377999999999999999999999999999999975 599999999994211
Q ss_pred ---------CC--------------------C----ccC------------------------CcCc--------cc---
Q 038924 641 ---------PD--------------------Q----TYD------------------------AWSA--------NG--- 652 (920)
Q Consensus 641 ---------~d--------------------~----t~D------------------------~w~~--------~G--- 652 (920)
.+ + +.| .|.+ .|
T Consensus 490 ~~~~~~~G~~n~~~~~~~~~~~~~~~~~~~~~~WESGmDNap~f~~i~~~~~~~y~r~~y~r~~~~V~~~~~~~~dg~l~ 569 (786)
T PRK10137 490 DKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLL 569 (786)
T ss_pred cccccccccccccccccccccccccccccccCCCCCCCCCccccccccccccchhhhccccccceeeeehhcccCCCCcc
Confidence 00 1 123 1111 01
Q ss_pred ------hhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCC--e-eeEcCCCCC-----Ccccc
Q 038924 653 ------VSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNGS--Y-FNYDNSDGS-----SSTSI 717 (920)
Q Consensus 653 ------~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~--y-y~~D~~~~~-----~~~~i 717 (920)
+++-+++++|.+.+.+++||+.+|+.+.+++|++.|+++++.|++ +||++ + |.+|..+.. ..+.|
T Consensus 570 ~~p~~~e~VDLNsyLy~a~~~LA~LAe~LG~~e~A~~~~~~A~~Lr~aIn~~~WDee~GfY~DydL~~~~~~~~~~g~~i 649 (786)
T PRK10137 570 GYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDETTGFYYDVRIEDKPLANGCAGKPI 649 (786)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccCCcCCeEEEEecCcccccccccCcce
Confidence 255679999999999999999999999999999999999999999 99865 4 446543211 11111
Q ss_pred cc-ccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCccccccccCCCC-cccCCCCccCCCcchHHHHHHHH
Q 038924 718 QA-DQLAGQWYARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNGMQPDG-RIDMSGLQAREIWPGVTYGLAAS 795 (920)
Q Consensus 718 ~~-dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~g~~p~G-~~~~~~~~s~~vW~g~~y~lAa~ 795 (920)
.. ..-.+.+++.++| ++++++++++++.+.+... ..+..|++. +.+++ ..+...+..+.||+.++|.++.+
T Consensus 650 ~~~~~~~agf~PLwaG---ia~~eqA~~VV~~L~~p~~---F~t~~GipT-lS~s~p~ydp~~YWRGpVWpp~N~Li~~G 722 (786)
T PRK10137 650 VERGKGPEGWSPLFNG---AATQANADAVVKVMLDPKE---FNTFVPLGT-AALTNPAFGADIYWRGRVWVDQFYFGLKG 722 (786)
T ss_pred eeeccCccchhhccCC---CCCHHHHHHHHHHhcChhh---cCCCCCccC-cCCCccccCCCCCCCCCcCHhHHHHHHHH
Confidence 11 0012456778888 7899999888887654222 112222211 11222 12333577889999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHh--hhcCCCCCCCCCCcCccCC
Q 038924 796 MIQEEMVDMAFQTAAGVYEVA--WSEDGLGYSFQTPESWNNN 835 (920)
Q Consensus 796 mi~~G~~eeA~~~~~~i~~~~--~~~~g~G~~~~~PE~~~~~ 835 (920)
|.++|..++|.+++..+++++ |.+.| + .-|-|+..
T Consensus 723 L~rYG~~e~A~~La~~ll~~a~~l~~tG-~----~~E~YDp~ 759 (786)
T PRK10137 723 MERYGYRDDALKLADTFFRHAKGLTADG-P----IQENYNPL 759 (786)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHhcC-c----eEEeECCC
Confidence 999999999999999988754 34432 2 34777764
No 11
>TIGR01531 glyc_debranch glycogen debranching enzymye. glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground.
Probab=99.82 E-value=1.5e-18 Score=214.63 Aligned_cols=294 Identities=18% Similarity=0.150 Sum_probs=209.9
Q ss_pred HHHHhhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccccccchHHHH
Q 038924 516 FALVMLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLNSKFVL 595 (920)
Q Consensus 516 ~al~~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n~~fil 595 (920)
+.|..-.++.+|.+|+.|+..+. .|+||+-++.. ..+.||+.|+.+| |+.
T Consensus 1049 LlL~tGR~~eAk~ii~~fa~~lr--------------------~GLIPNll~~G----~~prYNt~DA~lW------fi~ 1098 (1464)
T TIGR01531 1049 MLLTTGRFDEARAIILAFAGTLR--------------------HGLIPNLLDEG----INPRYNCRDAAWF------WLQ 1098 (1464)
T ss_pred ceeccCCHHHHHHHHHHHHHHHH--------------------cCCCCCCCCCC----CcccccCccHHHH------HHH
Confidence 34556688999999999999762 57888877541 2358999999999 999
Q ss_pred HHHHHHHHhCC-HHH----------------------HHHHHHHHHHHHHHHHh---h----------------------
Q 038924 596 QVYRDFVATGD-KNF----------------------ARAVWPSVYIAMAYMEQ---F---------------------- 627 (920)
Q Consensus 596 ~v~ry~~~TGD-~~f----------------------L~~~~p~v~~al~~l~~---~---------------------- 627 (920)
+++.|++.++| .++ .+.+++.++.+|++..+ +
T Consensus 1099 AIqdY~~~~~dg~~iL~~~v~R~fp~Ddt~~~~~~~~~~~l~~~iqeIl~~h~~G~~fRE~NAGp~iD~~M~deGfn~~I 1178 (1464)
T TIGR01531 1099 CIQDYVEIVPNGEKILKDPVRRIYPDDDSIPVDDGRADQYLFEVIYEALQKHFQGIQFRERNAGPQIDRVMTDEGFNVTI 1178 (1464)
T ss_pred HHHHHHHHcCCHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHcCCccccccccccchhhhccccccceE
Confidence 99999999999 455 45678899999986531 1
Q ss_pred CCC-CCCCccCCCCC---CCccC-----------CcCc---cchhhHHHHHHHHHHHHHHHHHHHc-----CCchHHHHH
Q 038924 628 DKD-GDGMIENEGFP---DQTYD-----------AWSA---NGVSAYCGGLWVAALQAASALANDV-----GDHASASYF 684 (920)
Q Consensus 628 d~d-~dGL~e~~G~~---d~t~D-----------~w~~---~G~say~~~l~~aAL~a~a~lA~~l-----Gd~~~a~~~ 684 (920)
..| .|||+.. |.+ ..++| ++++ .|..+.+++|||+||+.+++|++.. |++.....|
T Consensus 1179 ~vD~~~GLI~g-Gn~~ncgTWMDkmg~SekA~~~G~p~TPRdG~aVEInaLwynAL~~~~~l~~~~~~~~~g~~~~~~~~ 1257 (1464)
T TIGR01531 1179 GVDWETGFIYG-GNRFNCGTWMDKMGESEKAGNKGIPATPRDGAAVEIVGLLKSALRFLIELKEKGVFKRSGVETQKWSY 1257 (1464)
T ss_pred EEcCCCCcEec-CCCCCCCCCcCCCCcccccccCCcccCCCCCCceeHHHHHHHHHHHHHHHHHhcCcCcCCcccchhhH
Confidence 133 5899983 332 23455 3444 4788899999999999999999987 776555679
Q ss_pred HHHHHHHHHHHhh-hccCC--eeeEcCCC---------------CC--CccccccccchhhHHHHHhCCC-CCCCHHHHH
Q 038924 685 WVRYQKAKAVYDS-LWNGS--YFNYDNSD---------------GS--SSTSIQADQLAGQWYARACGLL-PIADEAKVK 743 (920)
Q Consensus 685 ~~~a~~~k~~~~~-lWng~--yy~~D~~~---------------~~--~~~~i~~dql~Gq~~a~~~GL~-~i~~~e~~~ 743 (920)
++.++++++.|++ ||+++ -|.||..+ +. .+.++|+||+. +++|+ +++++++++
T Consensus 1258 ~~wa~~ik~~Fe~~F~~~~~~~~lyDv~~~~vnrrgIykD~~~s~~~~~D~qlRPN~~i------A~sla~~l~~~~~a~ 1331 (1464)
T TIGR01531 1258 IEWNQKIQDNFEKRFFVDESQDADYDVAKLGVNRRGIYKDSYGSTKPWTDYQLRPNFAI------AMTVAPELFVPEKAW 1331 (1464)
T ss_pred HHHHHHHHHHHhhhcCCCcccCccccccchhhccccccccccCCCCCCCCcccCCCceE------EEeCCcccCCHHHHH
Confidence 9999999999999 99843 35554332 11 36689999997 57775 589999999
Q ss_pred HHHHHHHHhccccccCCccccc---cccCC--CCcc--------cCCCCccCCCcchHH-HHHHHHHHHcCC---H----
Q 038924 744 KALTKIYDFNVLKVKGGMCGAM---NGMQP--DGRI--------DMSGLQAREIWPGVT-YGLAASMIQEEM---V---- 802 (920)
Q Consensus 744 saL~~v~~~nv~~~~~g~~G~~---~g~~p--~G~~--------~~~~~~s~~vW~g~~-y~lAa~mi~~G~---~---- 802 (920)
++|+.+ +.++.+. |..-+- +..+| +|.. +..++|.|.+|+... |.+-|.+...+. .
T Consensus 1332 ~~L~~v-~~LltP~--GlRTLdP~D~~Y~g~Y~g~~dsrD~~t~kg~aYHqG~eW~WllG~fl~A~lk~~~~~~~~~~~~ 1408 (1464)
T TIGR01531 1332 KALTIA-EVLLGPL--GMKTLDPSDWNYRGYYNNGEDSDDFATAKGRNYHQGPEWVWPIGYFLRARLHFHFKTGPRCQAA 1408 (1464)
T ss_pred HHHHHH-HHhccCC--ccccCCCCCcCCCCccCCchhhccccccccccccCCCcCccchhHHHHHHHHhccccccchhhH
Confidence 999999 8888654 211111 01111 1211 123799999999886 444444433333 1
Q ss_pred --HHHHHHHHHHHHHhhhcCCCCCCCCCCcCccCCCCCC--ccccchhhHHHHHHHHHc
Q 038924 803 --DMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNNDEYR--SLCYMRPLTIWAMQWALT 857 (920)
Q Consensus 803 --eeA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r--~~~Y~r~~a~w~~~~Al~ 857 (920)
+++.+.+.++.+++ .+.+ +..+||.+|+++.|| |+ +.++||+-..|.
T Consensus 1409 ~~~~~~~~L~~~~~~l-~~~~---~g~l~El~dgdgp~~~~gc----~aQAWSvaelLr 1459 (1464)
T TIGR01531 1409 AIKPVSYLLQQLYYHL-KESP---WRGLPELTNKDGEYCNDSC----PTQAWSVACLLE 1459 (1464)
T ss_pred HHHHHHHHHHHHHHHH-HhcC---CCCcccccCCCCCCCCCCC----HHHHHHHHHHHH
Confidence 23455677777777 5533 457999999998773 55 999999987664
No 12
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well.
Probab=99.75 E-value=4.1e-14 Score=169.45 Aligned_cols=505 Identities=15% Similarity=0.120 Sum_probs=289.1
Q ss_pred cceEEEEeecCCCCeEEEEEEEcccccCCCCCCCCCEEEEEEEEEeCCCCeEEEEEEEEeccccCCCCCCCCccccccee
Q 038924 178 PRAWTVYDGEPDPELRIVCRQISPFIPHNYKESSFPASVFTFTLSNSGQTSADVTLLFTWANSVAGDSGLSGHHFNSKTM 257 (920)
Q Consensus 178 P~a~t~y~~~~~~~i~v~~~~~SP~IP~d~kdSSlPv~vf~~~v~N~~~~~~~vsl~~~~~n~~G~~~~~~~~~~n~~~~ 257 (920)
|.-.++++ +++..++|+.+.|+. .+ .+|-+-+++++|.+++..++.+++...--+++.+. -|..+.
T Consensus 58 ~~~~~~~~-~~~~~~~i~~~~~~d---p~-----~~~l~~~v~~~~~~~~~~~~~l~~~~~p~l~~~g~-----~n~a~~ 123 (648)
T TIGR01535 58 LAYKLTNT-DKKGRYRITKQIFTD---PK-----RNALILKVTFEALKGSIGDYKLYLLLDPHLANTGG-----GNSGYV 123 (648)
T ss_pred CeEEEEEE-cCCCcEEEEEEEecC---CC-----ccEEEEEEEEEeCCCCCCCeEEEEEECCcccCCCC-----CCeEEE
Confidence 44556666 578889999998544 34 59999999999999989999988887655553211 122222
Q ss_pred cccCceeEEEeeccCCCCCCceEEEEEecCCCeEEEeeCccccCCCCCccchHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q 038924 258 TKDGVHGLTLHHRTANGRPPVTFAVAAEETADVHVSECPCFLLSGNSKGITAKDMWNEIKKHGSFDHLDNDKTSPSEPGS 337 (920)
Q Consensus 258 ~~~~~~Gv~l~~~~~~~~~~~~~aiaa~~~~~v~vt~~~~f~~~~~~~~~~~~~~W~~f~~~G~l~~~~~~~~~~s~~g~ 337 (920)
....-.+++.+.. .+..++|.+...- ...|+ | +....+.|+++.+||+|+.. ....+
T Consensus 124 ~~~~~~~~l~~~~-----~~~~~al~s~~~f-~~~s~-------G---~~g~sd~~~dl~~~g~L~~~------~~~~~- 180 (648)
T TIGR01535 124 IKYANNEMLMAKG-----DNVYLALVSSIGW-KAASA-------G---YVKVSDGMTDLDANGQLTKH------YDSAR- 180 (648)
T ss_pred ecCCCceeEEEeC-----CCeEEEEeCCCCc-cceee-------c---cccCCchHHHHHhCCCcccc------cccCC-
Confidence 2111123444432 1233444432211 11111 1 11123679999999998764 12223
Q ss_pred CeeEEEEEEeEecCCC-EEEEEEEEeeeCCcccccchhhhhcccccccCCcchHHHHHHHHHHHHHHHHHHHHhhccccc
Q 038924 338 SIGAAIAASLTIPSGS-TRSVTFSLAWDCPEVKFFEKVYHRRYTKFYGTLGDSAARIAHDAILEHAKWECEIEAWQRPIL 416 (920)
Q Consensus 338 ~~~aAva~~~~l~pge-~~tv~F~LaW~~P~~~f~g~~~~rrYt~~f~~~~~~a~~~a~~al~~~~~w~~~i~~wq~pil 416 (920)
-++|+....|++++ +.++.++|+..- ..-......+. ........+.+.-... |++-+..-.
T Consensus 181 --~gnv~~~g~l~~~~~~~~f~l~lgfg~--~~~~a~~~~~~------~l~~g~~~~~~~~~~~---W~~w~~~~~---- 243 (648)
T TIGR01535 181 --DGNIILAAEIDLTKASETFELVLGFGA--SAYEAAKTAVA------TLKEGYRRVKDAYIDE---WEKYLNSLN---- 243 (648)
T ss_pred --CCCeEEEEEecCCCCceEEEEEEEeCC--CHHHHHHHHHH------HHhcCHHHHHHHHHHH---HHHHHhccc----
Confidence 25788888999988 568888888521 11011110000 0000112222222222 433332210
Q ss_pred ccCCCCCcchhhhhhhhhhhccCceeeecCCCCccchhhhhhhccccCC-C-CcccCCCCCCccccccccccCccccCce
Q 038924 417 EDKRFPEWYPITLFNELYYLNAGGTIWTDGSPPMQSLATIRERKFSLDT-P-SKIHTPASSDTALGTRLLENGEENIGQF 494 (920)
Q Consensus 417 ~d~~lPdwy~~alfNeLyyl~~gg~iW~~~~~~~~~~~~~~~~~f~l~~-~-~~~~~~~~~~~~~~t~~~~~~~~~~G~F 494 (920)
.+|. .+.++|+-+. . .-+...+. . ..++++ .+ +.+= +..|.
T Consensus 244 ---~~~~-----~~~~~~~rS~---------------l---vLK~~~d~~~~GAiIAA---~T---ts~p----e~~g~- 286 (648)
T TIGR01535 244 ---NFNG-----KGNSLYYVSM---------------M---ILKAHEDKTNPGAYIAS---LS---IPWG----DGQAD- 286 (648)
T ss_pred ---cCCc-----hHHHHHHHHH---------------H---HHHHhcCCCCCCcEEEe---cC---CCCC----ccCCC-
Confidence 1222 2333332110 0 00000010 0 011111 11 1111 11121
Q ss_pred eeecCcccc-cccccccchhHHHHHH-hhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCC
Q 038924 495 LYLEGAEYV-MYNTYDVHFYSSFALV-MLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPW 572 (920)
Q Consensus 495 ~~~Eg~ey~-~~nT~DV~fYas~al~-~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw 572 (920)
.....|| +|- -|-.|-+ .||+ .-+.+.++..++.+.+.|..++.-..++.-+|.. .|
T Consensus 287 --~~n~dYryvW~-RD~a~~a-~AL~~~G~~~~a~~~~~~l~~~~~~~G~~lq~y~vdG~~-----------------~~ 345 (648)
T TIGR01535 287 --DNTGGYHLVWP-RDLYQVA-NAFLAAGDVDSALRSLDYLAKVQQDNGMFPQNSWVDGKP-----------------YW 345 (648)
T ss_pred --CCCCceEEEeh-hhHHHHH-HHHHHCCCHHHHHHHHHHHHHHhccCCCcCceeccCCCC-----------------CC
Confidence 1234676 443 6755444 6665 6689999999988888775322111122222211 11
Q ss_pred cccccccccCcccccccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCCCccCCCCCCCccCCcCc-c
Q 038924 573 FEINSYNLFNSSRWKDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQFDKDGDGMIENEGFPDQTYDAWSA-N 651 (920)
Q Consensus 573 ~~~~~y~~~D~~~W~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~~d~d~dGL~e~~G~~d~t~D~w~~-~ 651 (920)
..++ .|.....|+++|++++. +. ..+|+.|+++++|+.+.. +-..+|.|+. .
T Consensus 346 -----~~iQ-----lD~~g~~i~~~~~l~~~--~~---~~~~~~vk~aadfl~~~~------------p~p~~d~WEer~ 398 (648)
T TIGR01535 346 -----TGIQ-----LDETAFPILLAYRLHRY--DH---AFYDKMLKPAADFIVKNG------------PKTGQERWEEIG 398 (648)
T ss_pred -----CCcc-----ccHHHHHHHHHHHHHHc--Cc---HHHHHHHHHHHHHHHHcC------------CCCCCCcccccC
Confidence 0133 57777788999888874 22 457999999999997632 2235778986 4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCC-------eee-EcCCCC-----------
Q 038924 652 GVSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNGS-------YFN-YDNSDG----------- 711 (920)
Q Consensus 652 G~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~-------yy~-~D~~~~----------- 711 (920)
|.+.|+-+..++||.++++||+.+|+++.+++|++.|+++++.+++ +|+.+ +|. .-..+.
T Consensus 399 g~~~~T~a~v~aaL~~Aa~iA~~~g~~~~a~~w~~~Ad~i~~~i~~~~~~~~g~~~~~~~f~r~~~~~~~~~~~~~~~~n 478 (648)
T TIGR01535 399 GYSPSTLAAEIAGLTAAADIAEQNGDAGSAQKYRETADNWQKLIENWTFTTNGPLGDGQYYLRIAGLGDPNADFLINIAN 478 (648)
T ss_pred CcCchhHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhCcCCCcccCCCCeEEEeecCCCCcccccccccc
Confidence 7889998888999999999999999998899999999999999999 99854 665 311000
Q ss_pred -----CCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccc--cCCccccccccCC---CCcccCCCCcc
Q 038924 712 -----SSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYDFNVLKV--KGGMCGAMNGMQP---DGRIDMSGLQA 781 (920)
Q Consensus 712 -----~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~--~~g~~G~~~g~~p---~G~~~~~~~~s 781 (920)
..++.+.+.-| .++.+|+-+ .+++++.++|+.|.+.+.... .++...+.++-+. +|.+-. ..+.
T Consensus 479 ~~~~~~~~~~vDaSlL----~L~~~G~~~-~dDPri~~Tl~aIe~~L~~~~~~~g~~~RY~~Dgyg~~~~~~~~~-~~~~ 552 (648)
T TIGR01535 479 GGGVYPEKEVLDPGFL----ELVRLGVKS-PDDPHILATLKEIDSTIKVDTPKGPSWYRYTHDGYGEPAKTEAYD-GTGK 552 (648)
T ss_pred ccccCCCCCccCHHHH----HHHHcCCcC-CCCHHHHHHHHHHHHHhccCCCCCCeEEecCCCCCCCcCCCCCcc-CCcC
Confidence 11223332222 245677543 567799999999998776421 1233444332221 222111 2355
Q ss_pred CCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCcCccCC
Q 038924 782 REIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNN 835 (920)
Q Consensus 782 ~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~ 835 (920)
+++|+..|.+++..++..|. +|.++++++.... +. .|| +||++...
T Consensus 553 G~~Wpi~T~~~~~y~l~~~~--~a~~~l~~~~~~a-~~--~g~---lpEQV~d~ 598 (648)
T TIGR01535 553 GRLWPLLTGERGHYELAAGK--DATPYLKAMEKFA-NE--GGM---IPEQVWDQ 598 (648)
T ss_pred CceeehhhhHHHHHHHHcCC--hHHHHHHHHHHhc-Cc--CCC---cCcccCCC
Confidence 79999999999999998885 5789999999888 54 465 99999765
No 13
>PF03512 Glyco_hydro_52: Glycosyl hydrolase family 52; InterPro: IPR000852 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 52 GH52 from CAZY comprises enzymes with only one known activity; beta-xylosidase (3.2.1.37 from EC). Proteins harboring beta-xylosidase and xylanase activities []have been identified in the Gram-positive, facultative thermophilic aerobe Bacillus stearothermophilus 21 []. This microbe, which functions in xylan degradation, can utilise xylan as a sole source of carbon. The enzyme hydrolyses 1,4-beta-D-xylans, removing successive D-xylose residues from the non-reducing termini. It also hydrolyses xylobiose.; GO: 0009044 xylan 1,4-beta-xylosidase activity, 0005975 carbohydrate metabolic process
Probab=99.73 E-value=7.5e-17 Score=175.92 Aligned_cols=299 Identities=18% Similarity=0.227 Sum_probs=189.9
Q ss_pred EEEEEEEccccc---------CCCCCCCCCEEEEEEEEEeCCC-CeEEEEEEEEeccccCCCCCCCCcccccceecc-c-
Q 038924 193 RIVCRQISPFIP---------HNYKESSFPASVFTFTLSNSGQ-TSADVTLLFTWANSVAGDSGLSGHHFNSKTMTK-D- 260 (920)
Q Consensus 193 ~v~~~~~SP~IP---------~d~kdSSlPv~vf~~~v~N~~~-~~~~vsl~~~~~n~~G~~~~~~~~~~n~~~~~~-~- 260 (920)
.++.+.+|||-| .+.|....|+.+.++++.|+++ ++++.-+-+ ++..-+ +.. .++... +
T Consensus 98 ~ltf~i~Spf~~VPDP~~a~~~elr~Al~Pav~~elt~DNt~~~~~~~~fFG~--~g~dp~----s~~---R~l~d~~~g 168 (428)
T PF03512_consen 98 DLTFRIYSPFGSVPDPATADEEELRFALCPAVLAELTLDNTSGTEPRRAFFGL--QGNDPY----SAM---RRLSDTTGG 168 (428)
T ss_pred CEEEEEEcCCcCCCCcccCCHHHHHhhcCCeEEEEEEEeCCCCCceeeeEeee--cCCCcc----ccc---cccCCCCCC
Confidence 467888999976 5667889999999999999886 455544333 332110 000 001111 1
Q ss_pred CceeEEEeeccCCCCCCceEEEEEecCCCeEEEeeCccccCCCCCccchHHHHHHHHhcCCCCCCCCCCCCCCCCCCCee
Q 038924 261 GVHGLTLHHRTANGRPPVTFAVAAEETADVHVSECPCFLLSGNSKGITAKDMWNEIKKHGSFDHLDNDKTSPSEPGSSIG 340 (920)
Q Consensus 261 ~~~Gv~l~~~~~~~~~~~~~aiaa~~~~~v~vt~~~~f~~~~~~~~~~~~~~W~~f~~~G~l~~~~~~~~~~s~~g~~~~ 340 (920)
...|+. ....++||+. .+++. ....|+. .+ ...+.. . ..+...++
T Consensus 169 ~l~G~~---------~gr~~~iAt~-~~~v~--~~~~f~~---------~~----~l~~~~-~---------~~~~f~Lg 213 (428)
T PF03512_consen 169 RLCGVG---------QGRQTGIATA-DPGVE--EAMDFDM---------ED----ALFNKH-P---------ENPEFGLG 213 (428)
T ss_pred ceEEEe---------cCcEEEEEeC-CCCce--eecCcCH---------hH----hhcccc-c---------CCcccccC
Confidence 122332 1235788874 45553 2222322 11 111111 1 11112234
Q ss_pred EEEEEEeEecCCCEEEEEEEEeeeCCcccccchhhhhcccccccCCcchHHHHHHHHHHHHHHHHHHHHhhcccccccCC
Q 038924 341 AAIAASLTIPSGSTRSVTFSLAWDCPEVKFFEKVYHRRYTKFYGTLGDSAARIAHDAILEHAKWECEIEAWQRPILEDKR 420 (920)
Q Consensus 341 aAva~~~~l~pge~~tv~F~LaW~~P~~~f~g~~~~rrYt~~f~~~~~~a~~~a~~al~~~~~w~~~i~~wq~pil~d~~ 420 (920)
..-+..+.|||||++|++|+|+.|...+...|....++||++|.+ ..+++.|||.++....+...+-...
T Consensus 214 ~~gaL~~~VpaGE~~t~~~al~fY~~G~vT~g~~~syyYTr~F~~----ie~V~~yaL~~~~~~~a~a~~~d~~------ 283 (428)
T PF03512_consen 214 PTGALLFDVPAGEKRTYRFALCFYRGGIVTTGLDTSYYYTRLFKD----IEEVLEYALENFDRYLALAAERDEE------ 283 (428)
T ss_pred ccceEEEEeCCCceEEEEEEEEEeecCeEecCcccceehhhhhcC----HHHHHHHHHHhHHHHHHHHHHHhHH------
Confidence 445678899999999999999999888777888889999999887 8999999999998888777755321
Q ss_pred CCCcchhhhhhhhhhhccCceeeecCCCCccchhhhhhhccccCCCCcccCCCCCCc-cccccccccCccccCceeeecC
Q 038924 421 FPEWYPITLFNELYYLNAGGTIWTDGSPPMQSLATIRERKFSLDTPSKIHTPASSDT-ALGTRLLENGEENIGQFLYLEG 499 (920)
Q Consensus 421 lPdwy~~alfNeLyyl~~gg~iW~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~-~~~t~~~~~~~~~~G~F~~~Eg 499 (920)
+.++-+| +.++|.+++ +.+| +.+|.|+.++. ...|.+.||
T Consensus 284 ----l~~s~Ls-------------------------edqkFmlAh--------A~hSYYgSTqLL~~~G--~PlWVVNEG 324 (428)
T PF03512_consen 284 ----LESSGLS-------------------------EDQKFMLAH--------ATHSYYGSTQLLDDDG--KPLWVVNEG 324 (428)
T ss_pred ----HhhcCCC-------------------------hhHHHHHHH--------HHHhhhcchhhhhcCC--ceEEEEecc
Confidence 1122222 267788775 3445 34788876431 135888999
Q ss_pred cccccccccccchhHHHHHHhhcHHH------HHHHHHHHHHHhhccCCCceeeecCCcchhcccCC-CCccCCCCCCCC
Q 038924 500 AEYVMYNTYDVHFYSSFALVMLFPKL------ELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLG-AVPHDIGLDDPW 572 (920)
Q Consensus 500 ~ey~~~nT~DV~fYas~al~~l~PeL------~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G-~vPhd~G~~~Pw 572 (920)
||+|+||+| +.+.+||-|| .|++|..|.......|. +++..+... -+-| .+.||+|+.+.|
T Consensus 325 -EYrMmNTfD------LTvDqlFfEL~~nPWTVrN~Ld~fv~rYSY~D~--V~~p~d~~~---yPgGisFtHDMGVaN~F 392 (428)
T PF03512_consen 325 -EYRMMNTFD------LTVDQLFFELKFNPWTVRNVLDLFVERYSYRDE--VRFPGDETE---YPGGISFTHDMGVANHF 392 (428)
T ss_pred -eeEEeehhh------hhHHHhhhheecCcceehhhHHHHhhhceeccc--ccCCCCccc---cCCceeeeccccccccc
Confidence 999999999 8999999999 79999999998887774 333333111 1122 268999998888
Q ss_pred cccccccccCcccccccchHHHHHHHHH
Q 038924 573 FEINSYNLFNSSRWKDLNSKFVLQVYRD 600 (920)
Q Consensus 573 ~~~~~y~~~D~~~W~D~n~~fil~v~ry 600 (920)
.+..+ - .+.-..+.-+|-+|.++-
T Consensus 393 S~~g~-S---sYEl~gLd~CFS~MT~Eq 416 (428)
T PF03512_consen 393 SPPGY-S---SYELPGLDGCFSHMTHEQ 416 (428)
T ss_pred CCCCc-c---eeecCCccchhhccCHHH
Confidence 76432 1 112224445577776653
No 14
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [].; PDB: 2OKX_B 3CIH_A.
Probab=99.49 E-value=3.7e-13 Score=159.88 Aligned_cols=241 Identities=19% Similarity=0.282 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCCCccCCCCCCCccCCcC--------ccchhhHHHHHHHHH
Q 038924 593 FVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQFDKDGDGMIENEGFPDQTYDAWS--------ANGVSAYCGGLWVAA 664 (920)
Q Consensus 593 fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~~d~d~dGL~e~~G~~d~t~D~w~--------~~G~say~~~l~~aA 664 (920)
+|+.++.||+.|||.+||+++||.+++.|+|+..+..+ |+.. ..+..+-+|. ..+.....+++++.+
T Consensus 209 ~i~~~~~~y~~tGD~~~l~~~~~~~~~~l~~~~~~~~~--~~~~---~~~~~~~DW~~~~~~~~~~~~~~~~~~~~~~~~ 283 (509)
T PF05592_consen 209 WIIIPWDYYLYTGDREFLEEYYPAMKRYLDYLERRVDD--GLDG---LPGWGFGDWLAPGNDGDGPTPGATITNALYYYA 283 (509)
T ss_dssp HHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHTTB-T--SSB----CCSB--S-SS----TT---SCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhCCc--cccC---CCCCceeecCCccCcccccchHHHHHHHHHHHH
Confidence 79999999999999999999999999999999764433 3331 1222333454 234556689999999
Q ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCCeeeEcCCCCCCccccccccchhhHHHHHhCCCCCCCHHHH-
Q 038924 665 LQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNGSYFNYDNSDGSSSTSIQADQLAGQWYARACGLLPIADEAKV- 742 (920)
Q Consensus 665 L~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~yy~~D~~~~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~- 742 (920)
|+++++||+.+|+++.+++|+++++++|++|++ |||.+--.+... + | .+|.+|.++| ++++++.
T Consensus 284 l~~~a~lA~~lg~~~~a~~y~~~a~~lk~a~~~~~~d~~~g~~~~~------s----q-~~~alAl~~g---l~p~~~~~ 349 (509)
T PF05592_consen 284 LRAAAELAEALGKDEDAAEYRARAERLKAAINRHFWDPEKGGYADG------S----Q-HANALALLFG---LVPEEERA 349 (509)
T ss_dssp HHHHHHHHHHCT-HHHHHHHHHHHHHHHHHHHHHCEETTTTEECTT------S----H-CHHHHCHHCC---HC-HHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhccCcccCcccCC------c----h-HHHHHHHHhc---hhhhhhhH
Confidence 999999999999999999999999999999999 997542122211 1 2 2467788899 5666655
Q ss_pred HHHHHHHHHhccccccCCccccccccCCCCcccCCCCccCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhc-CC
Q 038924 743 KKALTKIYDFNVLKVKGGMCGAMNGMQPDGRIDMSGLQAREIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVAWSE-DG 821 (920)
Q Consensus 743 ~saL~~v~~~nv~~~~~g~~G~~~g~~p~G~~~~~~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~~~~-~g 821 (920)
..+++.+.+. +.. .+..+ . .+.+ .++.+-..|.+.|..+.|++++.......|.. .-
T Consensus 350 ~~~~~~l~~~-~~~---------~~~~~----~-----~g~~---g~~~~~~~L~~~g~~~~a~~~~~~~~~~~w~~ml~ 407 (509)
T PF05592_consen 350 AAALKRLAKR-IAA---------NGYHL----S-----TGFI---GSPYLLEALFRAGRADGAYDLLTQRDYPSWGYMLD 407 (509)
T ss_dssp CHCHCHCHHC-CHC---------CCHS-----------TCCC----CHHHHHHHHHCCHHCCHHHHHHHHHHHHCHHHHC
T ss_pred HHHHHHHHHH-HHh---------cCCCc----C-----cccc---cHHHHHHHHHHcCCHHHHHHHHHhccccchhHHHh
Confidence 4444433331 110 01111 1 1111 22344577888999999999887643332221 00
Q ss_pred CCCCCCCCcCccCC---CCCCc-cccchhhHHHHHHHHHcCCCCcccC-CeeEEecCC-c
Q 038924 822 LGYSFQTPESWNNN---DEYRS-LCYMRPLTIWAMQWALTKPKLSRQE-IKHEISDRD-S 875 (920)
Q Consensus 822 ~G~~~~~PE~~~~~---~~~r~-~~Y~r~~a~w~~~~Al~g~~~~~~~-~~l~~~~~~-~ 875 (920)
.| .-.++|.|++. ...+| +|.|.+.-...|...|.|+++..+. +++.|.|++ +
T Consensus 408 ~g-~tT~wE~w~~~~~~~~~~S~~H~w~~~p~~~l~~~v~GI~p~~pG~~~~~i~P~~~~ 466 (509)
T PF05592_consen 408 QG-ATTLWEYWDGDGGDPPNRSLCHAWSAGPTYWLYRYVLGIRPTEPGFKEFRIAPQPPG 466 (509)
T ss_dssp TT--SS--SS-STT-TCTT-S-SSBGGG-THHHHHHHCTS-EEESSGGGSEEEE-----T
T ss_pred CC-CCEEEEecCccCCCCCCCCCCCCcchhHHHHHHHHhhceEeCCCCCcEEEEEEecCC
Confidence 24 44679999962 22233 8888887777799999999988777 899999988 5
No 15
>PLN03005 beta-fructofuranosidase
Probab=99.35 E-value=2.4e-10 Score=129.27 Aligned_cols=248 Identities=16% Similarity=0.240 Sum_probs=161.3
Q ss_pred cCcccccccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH----HhhCCCCCCCccC-CCCCCCccC-CcCccchh
Q 038924 581 FNSSRWKDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYM----EQFDKDGDGMIEN-EGFPDQTYD-AWSANGVS 654 (920)
Q Consensus 581 ~D~~~W~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l----~~~d~d~dGL~e~-~G~~d~t~D-~w~~~G~s 654 (920)
+|..+| ||+.++.|.+.|||.+|.++ |.|+++|.++ ....-|...++.. +|. ...| -..+.|..
T Consensus 203 VDS~LW------WIIllraY~k~tgD~s~~e~--pevQrgi~lil~lcLa~~Fd~~ptLlvpDgs--~miDRrMgv~G~p 272 (550)
T PLN03005 203 VDSGFW------WIILLRAYTKSTGDLTLSET--PECQKGMKLILSLCLAEGFDTFPTLLCADGC--SMIDRRMGVYGYP 272 (550)
T ss_pred cchhhH------HHHHHHHHHhhccchhhhhC--hHHHHHHHHHHHHhcccccCCCceEeccCCc--cccccccccCCcc
Confidence 888888 99999999999999999999 9999999998 3444444566553 221 1344 33568999
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCC-chHHHHHHHHHHHHHHHHhh-hc-c----CCeeeEcC-------------------
Q 038924 655 AYCGGLWVAALQAASALANDVGD-HASASYFWVRYQKAKAVYDS-LW-N----GSYFNYDN------------------- 708 (920)
Q Consensus 655 ay~~~l~~aAL~a~a~lA~~lGd-~~~a~~~~~~a~~~k~~~~~-lW-n----g~yy~~D~------------------- 708 (920)
.|+++|||.||+++.+|-+.-.+ .+........+..++..+.+ +| | ..-|+|..
T Consensus 273 LeiQaLfy~ALR~~~~~L~~~~~~~~~i~~i~~rl~~L~~h~r~yyWld~~~ln~iyr~kteey~~~a~NkfNi~pd~ip 352 (550)
T PLN03005 273 IEIQALFFMALRSALSMLKPDGDGREFIERIVKRLHALSFHMRNYFWLDHQNLNDIYRFKTEEYSHTAVNKFNVMPDSIP 352 (550)
T ss_pred HHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHHHHHHHHHheecchhhhhhhhhccHhhhchhhhhccccCCccch
Confidence 99999999999999885443222 12222333333334455556 67 1 12233210
Q ss_pred ----------CC------CCCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHH---hccccccCCccccccccC
Q 038924 709 ----------SD------GSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYD---FNVLKVKGGMCGAMNGMQ 769 (920)
Q Consensus 709 ----------~~------~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~---~nv~~~~~g~~G~~~g~~ 769 (920)
++ +...-..+-+ .+|..+|.++| +++++++++.|+.|.+ .++ +.+-+..|.
T Consensus 353 ~wl~dwlp~~gGY~igNv~pa~~dfRff-slGNllAILs~---Lat~~Qs~aIm~lIe~~w~~Lv-----~~MPlkIcy- 422 (550)
T PLN03005 353 EWVFDFMPLRGGYFVGNVGPAHMDFRWF-ALGNCVSILSS---LATPDQSMAIMDLLEHRWEELV-----GEMPLKICY- 422 (550)
T ss_pred hhhhhhcccCCceeeeecccccCCceeh-hhhhHHHHHhc---cCCHHHHHHHHHHHHHHHHHHh-----ccCCcceee-
Confidence 00 0000011222 35788888999 6899999999998872 222 122222222
Q ss_pred C--CC---------cccCC--CCccCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCcCccCC-
Q 038924 770 P--DG---------RIDMS--GLQAREIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNN- 835 (920)
Q Consensus 770 p--~G---------~~~~~--~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~- 835 (920)
| .| .+++. ++|++-.||.+...+.+++++.|..+.|.+.++.+-++. .++ .+ ||-|++.
T Consensus 423 Pa~e~~eWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~gr~~lA~ral~~ae~rl-~~d----~W--pEyydGkt 495 (550)
T PLN03005 423 PCLEGHEWRIVTGCDPKNTRWSYHNGGSWPVLLWQLTAACIKTGRPQIARRAVDLIESRL-HRD----CW--PEYYDGKL 495 (550)
T ss_pred cccCCccceecccCCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh-hhc----Cc--hhhcCCCC
Confidence 2 11 12332 679999999999999999999999999999999888777 443 23 9989885
Q ss_pred CCCCcccc-chhhHHHHHHHHHc
Q 038924 836 DEYRSLCY-MRPLTIWAMQWALT 857 (920)
Q Consensus 836 ~~~r~~~Y-~r~~a~w~~~~Al~ 857 (920)
|++ .+. .|+-+.|++.-.|.
T Consensus 496 Gr~--iGkqar~~QTWSiAG~Ll 516 (550)
T PLN03005 496 GRY--VGKQARKYQTWSIAGYLV 516 (550)
T ss_pred Ccc--cceeccccCchHHHHHHH
Confidence 444 222 47888998876554
No 16
>PLN02973 beta-fructofuranosidase
Probab=99.28 E-value=1.4e-09 Score=123.18 Aligned_cols=251 Identities=16% Similarity=0.174 Sum_probs=161.8
Q ss_pred cCcccccccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh----hCCCCCCCccCCCCCCCcc-CCcCccchhh
Q 038924 581 FNSSRWKDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ----FDKDGDGMIENEGFPDQTY-DAWSANGVSA 655 (920)
Q Consensus 581 ~D~~~W~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~----~d~d~dGL~e~~G~~d~t~-D~w~~~G~sa 655 (920)
+|..+| ||+.++.|.+.|||.+|.+ .|.|+++|.++.. ..-|...++......+ .. |-..+.|...
T Consensus 224 VDS~LW------WIIllraY~k~TgD~s~~e--~pevQrgi~lil~lcL~~~Fd~~ptLlVpDgs~-miDrrMgv~G~pL 294 (571)
T PLN02973 224 VDSGFW------WIILLRAYTKSTGDSSLAD--MPECQKGIRLILSLCLSEGFDTFPTLLCADGCC-MIDRRMGVYGYPI 294 (571)
T ss_pred cchhhH------HHHHHHHHHHhccchhhhh--cHHHHHHHHHHHHHhcccccCCCceEeccCCcc-ccccccccCCccH
Confidence 888888 9999999999999999999 8999999999864 4444456665321111 22 3334689999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-chHHHHHHHHHHHHHHHHhh-hcc-----CCeeeEcC--------------------
Q 038924 656 YCGGLWVAALQAASALANDVGD-HASASYFWVRYQKAKAVYDS-LWN-----GSYFNYDN-------------------- 708 (920)
Q Consensus 656 y~~~l~~aAL~a~a~lA~~lGd-~~~a~~~~~~a~~~k~~~~~-lWn-----g~yy~~D~-------------------- 708 (920)
|+++|||.||+++.+|-+.-.+ .+...+.......++..+.+ +|. .+-|+|..
T Consensus 295 eiQaLfy~ALR~a~~~L~~~~~~~~~i~~i~~rl~~L~~hir~~ywld~~~ln~iyRykteey~~~a~NkfNi~p~sip~ 374 (571)
T PLN02973 295 EIQALFFMALRCALLLLKHDGEGKEMVEQIVKRLHALSYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPE 374 (571)
T ss_pred HHHHHHHHHHHHHHHhcCccchhHHHHHHHHhhHHHHHHHHHHHHhcCHHHhhhHhhcchhhcchhhhhhccCCccccch
Confidence 9999999999999885443222 12223333344445556666 773 11222210
Q ss_pred ---------CC------CCCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHH---hccccccCCccccccccCC
Q 038924 709 ---------SD------GSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYD---FNVLKVKGGMCGAMNGMQP 770 (920)
Q Consensus 709 ---------~~------~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~---~nv~~~~~g~~G~~~g~~p 770 (920)
++ +...-..+-+ .+|..+|.++| +++++++++.|+.|.. .++ +.+.+..|..|
T Consensus 375 wl~dwlp~~gGY~igNv~Pa~~DfRff-slGNllAILs~---Lat~~Qs~aIm~lIe~~w~~Lv-----g~MPlkicyPa 445 (571)
T PLN02973 375 WVFDFMPPHGGFFIGNVSPARMDFRWF-ALGNCIAILSS---LATPEQSTAIMDLIESRWEELV-----GEMPLKVCYPA 445 (571)
T ss_pred hhhhhccCCCceeeeecccccCCcchh-hhhhHHHHHhc---cCCHHHHHHHHHHHHHHHHHHH-----hcCCcceeccC
Confidence 00 0000011222 35788888999 5899999999998876 122 11222222222
Q ss_pred -C--------C-cccCC--CCccCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCcCccCC-CC
Q 038924 771 -D--------G-RIDMS--GLQAREIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNN-DE 837 (920)
Q Consensus 771 -~--------G-~~~~~--~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~-~~ 837 (920)
. | .+++. ++|++-.||.+...+.+++++.|..+.|.+.++.+-++. .++ .+ ||-|++. |+
T Consensus 446 ie~~EWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~gr~~lA~ral~~ae~rl-~~d----~W--pEyyDGktGr 518 (571)
T PLN02973 446 IESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRAIEVAEARL-HKD----HW--PEYYDGKVGR 518 (571)
T ss_pred cCCccceehhccCCCCCccceecCCCccHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh-hhc----CC--hhhcCCCCCc
Confidence 1 1 12332 679999999999999999999999999999999887777 443 23 9989885 44
Q ss_pred CCccccchhhHHHHHHHHHc
Q 038924 838 YRSLCYMRPLTIWAMQWALT 857 (920)
Q Consensus 838 ~r~~~Y~r~~a~w~~~~Al~ 857 (920)
+-|- =.|--+.|++.-.|.
T Consensus 519 ~iGk-qar~yQTWSiAG~Ll 537 (571)
T PLN02973 519 YVGK-QSRKNQTWSVAGYLV 537 (571)
T ss_pred Ccce-eccccCchHHHHHHH
Confidence 4221 124578888776444
No 17
>PRK13271 treA trehalase; Provisional
Probab=99.27 E-value=7.4e-10 Score=130.75 Aligned_cols=263 Identities=16% Similarity=0.190 Sum_probs=177.9
Q ss_pred HHHH-hhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccccccchHHH
Q 038924 516 FALV-MLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLNSKFV 594 (920)
Q Consensus 516 ~al~-~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n~~fi 594 (920)
.+|+ .-..+++|+|++.|+..+. ..|.||+.-.. +|-. ..-.|.|.
T Consensus 170 ~GLl~s~~~~~a~~mi~Nf~~~i~-------------------~yG~IPNg~R~--------YYl~------RSQPP~l~ 216 (569)
T PRK13271 170 LGLAESGHWDKVADMVANFAHEID-------------------TWGHIPNGNRS--------YYLS------RSQPPFFA 216 (569)
T ss_pred HhhHhcCCHHHHHHHHHHHHHHHH-------------------HhCcCcCCchh--------hccc------CCCChhHH
Confidence 6665 5678999999999999873 25888885442 3322 23456689
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHhh--------------CCCCCCCccCC----CC---------------
Q 038924 595 LQVYRDFVATGDKNFARAVWPSVYIAMAY-MEQF--------------DKDGDGMIENE----GF--------------- 640 (920)
Q Consensus 595 l~v~ry~~~TGD~~fL~~~~p~v~~al~~-l~~~--------------d~d~dGL~e~~----G~--------------- 640 (920)
.+|..|+..|+| +||++..|.+++=.+| +... ..++.+|-.+. +.
T Consensus 217 ~Mv~~~~~~~~~-~~l~~~lp~l~kEy~~Wm~~~~~~~~~~~~~r~v~~~~~~~L~rY~~~~~~PRpEsy~eD~~~a~~~ 295 (569)
T PRK13271 217 LMVELLAQHEGD-AALKQYLPQMQKEYAYWMEGVENLQPGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSN 295 (569)
T ss_pred HHHHHHHhcCcH-HHHHHHHHHHHHHHHHHhCCCcccCccccccceEEeCCCCcccccccCCCCCCCCcHHHHHHHHhhC
Confidence 999999999988 6999999999988775 4321 12344444421 00
Q ss_pred ---------------CCCccCC---cCccc-----------hhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038924 641 ---------------PDQTYDA---WSANG-----------VSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKA 691 (920)
Q Consensus 641 ---------------~d~t~D~---w~~~G-----------~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~ 691 (920)
...++|. |-..+ .++-+|+++|.+.+.++++|+.+|+.+.+++|++.|++.
T Consensus 296 ~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~~i~t~~IiPVDLNALLy~ae~~LA~la~~lGd~~~A~~y~~~A~~r 375 (569)
T PRK13271 296 PNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTIRTTSIVPVDLNALMFKMEKILARASKAAGDNAMANQYETLANAR 375 (569)
T ss_pred CcchHHHHHHHHHHHhhcCCcchhhhccCCccccccccccccCchHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHHHHH
Confidence 0112332 21111 335689999999999999999999999999999999999
Q ss_pred HHHHhh-hccCC---eeeEcCCCCCCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCccccccc
Q 038924 692 KAVYDS-LWNGS---YFNYDNSDGSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNG 767 (920)
Q Consensus 692 k~~~~~-lWng~---yy~~D~~~~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~g 767 (920)
+++|++ |||++ ||.||..+....+.. -+..+++..+| ++++++++++++.+.+.++.+ .|++..
T Consensus 376 r~AI~~~LWnee~G~f~DYDl~~~~~r~~~----saa~f~PLwag---~a~~~qA~~Vv~~l~~~Ll~p-----gGLpTt 443 (569)
T PRK13271 376 QKAIEKYLWNDKEGWYADYDLKSHKVRNQL----TAAALFPLYVN---AAAKDRANKVAAATKTHLLQP-----GGLNTT 443 (569)
T ss_pred HHHHHHhcccCCCCEEEEEECCCCCEeech----hHHHHHhhhcC---CCCHHHHHHHHHHHHHhcCCC-----CCccCC
Confidence 999999 99854 666876532222222 12344677778 688999999998877655531 233222
Q ss_pred cCCCC-cccCCCCccCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHh---hhcCCCCCCCCCCcCccC
Q 038924 768 MQPDG-RIDMSGLQAREIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVA---WSEDGLGYSFQTPESWNN 834 (920)
Q Consensus 768 ~~p~G-~~~~~~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~---~~~~g~G~~~~~PE~~~~ 834 (920)
....| .+|.| ++|+-.++.+..+|.++|..+.|.++...-.+.. |.+. | ..-|-||.
T Consensus 444 ~~~SgqQWD~P-----ngWaPlq~iiieGL~~yG~~~lA~~la~rwl~~~~~~~~~~--g---~m~EKYd~ 504 (569)
T PRK13271 444 SVKSGQQWDAP-----NGWAPLQWVATEGLQNYGQKEVAMDVTWRFLTNVQHTYDRE--K---KLVEKYDV 504 (569)
T ss_pred CCCCCCCCcCc-----ccCHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccc--C---ceEEeeCC
Confidence 21122 23332 6799999999999999999999999877544332 3442 2 24566665
No 18
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.26 E-value=5.8e-10 Score=133.78 Aligned_cols=280 Identities=19% Similarity=0.186 Sum_probs=193.9
Q ss_pred hHHHHHH-hhcHHHHHHHHHHHHHHhhccCCCceeeecCC-cchhcccCCCCccCCCCCCCCcccccccccCcccccccc
Q 038924 513 YSSFALV-MLFPKLELSIQRDFAAAVMMHDPGTMKIMSDG-KWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLN 590 (920)
Q Consensus 513 Yas~al~-~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g-~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n 590 (920)
|+++||. .-+.+.++..+..+.+.+...+.-..++..+| .++ ++-.+. . .++ ..-..|.|.+
T Consensus 292 ~~~~AL~~~G~~~~a~~~f~~l~~~~~~~~~~~~~y~~~g~~~~--------~~w~~~-----~-~~~--~~~pv~~~~~ 355 (612)
T COG3387 292 YAALALLAIGYKKEALRFFEFLPDVQTPNGKLYHKYSIDGSDLA--------ESWLPV-----S-GYY--NSFPVRIGNT 355 (612)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhhCCCCceeeEEecCCCccc--------cccccc-----c-CCC--CCCceEEcch
Confidence 5578887 66889999998888887754432223333344 222 111110 0 111 1234457777
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHHHhhCCCCCCCccCCCCCCCccCCcCcc-chhhHHHHHHHHHHHHH
Q 038924 591 SKFVLQVYRDFVATGDKNFARAV-WPSVYIAMAYMEQFDKDGDGMIENEGFPDQTYDAWSAN-GVSAYCGGLWVAALQAA 668 (920)
Q Consensus 591 ~~fil~v~ry~~~TGD~~fL~~~-~p~v~~al~~l~~~d~d~dGL~e~~G~~d~t~D~w~~~-G~say~~~l~~aAL~a~ 668 (920)
..-.+++..|+...+|..+.... +..++.+.+++.+.+....+++. ...|.|+.. |..+|..+..|+||.++
T Consensus 356 a~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~~~WEer~g~~~yt~~~~~agLd~A 429 (612)
T COG3387 356 ALVQGALDVYGSIMNDIYFYAKYYAIYILPAADYLRRMEKIKANLPT------PDFDLWEERGGHFTYTKATVYAGLDAA 429 (612)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhhhcCCCC------CccceecccCCcccchHHHHHHHHHHH
Confidence 77889999999999999887665 55677777887664444445554 346778865 67999999999999999
Q ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCC--eee--EcCCCCCCccccccccchhhHHHHHhCCCCCCCHHHHH
Q 038924 669 SALANDVGDHASASYFWVRYQKAKAVYDS-LWNGS--YFN--YDNSDGSSSTSIQADQLAGQWYARACGLLPIADEAKVK 743 (920)
Q Consensus 669 a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~--yy~--~D~~~~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~ 743 (920)
+.||+..|+.+.++.|++.++++++.+.+ +++.+ ||. +.. ..++.+.+.-+. +.+.|+-+ .++.++.
T Consensus 430 ~~lA~~~gd~~~a~~~~~~ad~ik~~v~~~~~~~~~~~f~r~~~~---~~~~~vDasll~----l~~fg~i~-~~D~~~~ 501 (612)
T COG3387 430 ADLAEEFGDKGSAEHWRKTADELKEAVLRRGYAEDGGYFVRSLGR---KPDDTVDASLLG----LVLFGFIP-PDDPRIL 501 (612)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHhcccccCCeeehhcCC---CccccccHHHhh----ccccCccC-CCCHHHH
Confidence 99999999999999999999999999999 88654 565 322 112233222111 22344422 5677899
Q ss_pred HHHHHHHHhccccccCCccccccccCCCCcccCCCCccCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcCCCC
Q 038924 744 KALTKIYDFNVLKVKGGMCGAMNGMQPDGRIDMSGLQAREIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVAWSEDGLG 823 (920)
Q Consensus 744 saL~~v~~~nv~~~~~g~~G~~~g~~p~G~~~~~~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~~~~~g~G 823 (920)
..+++|.+.+.++. .+..++-+ ...+| ..+.+.+|+.++++++..++..|..++|.++++++.... .. .|
T Consensus 502 ~t~~~I~~~L~~~~-~gi~RY~~-~~~d~-----~~~~~~~w~i~t~Wl~~~~~~~g~~~~a~~ll~~l~~~a-~~--~g 571 (612)
T COG3387 502 ATVEAIERELLVDG-GGIRRYNN-EYDDG-----LGGDNGPWIITTLWLSEYYLALGRLDEAKKLLEWLLAFA-SP--LG 571 (612)
T ss_pred HHHHHHHHHHhhcC-CcEEcCcc-ccccc-----cCCCCCcceeehhHHHHHHHHccchHHHHHHHHHHHHhc-CC--CC
Confidence 99999999887531 13444433 11222 223346999999999999999999999999999999888 66 56
Q ss_pred CCCCCCcCccCC
Q 038924 824 YSFQTPESWNNN 835 (920)
Q Consensus 824 ~~~~~PE~~~~~ 835 (920)
+ .||+++..
T Consensus 572 l---l~EQv~~~ 580 (612)
T COG3387 572 L---LPEQVDDG 580 (612)
T ss_pred C---cchhhcCC
Confidence 5 89999885
No 19
>PLN02567 alpha,alpha-trehalase
Probab=99.21 E-value=4.6e-09 Score=124.63 Aligned_cols=277 Identities=17% Similarity=0.282 Sum_probs=175.4
Q ss_pred cccchhHHHHHHhh-cHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccc
Q 038924 508 YDVHFYSSFALVML-FPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRW 586 (920)
Q Consensus 508 ~DV~fYas~al~~l-~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W 586 (920)
.|..|-+ .+|+.. ..+++++|++.|+..|. ..|.||+.-.. +|-.
T Consensus 156 WDSy~i~-~GLl~s~~~~~A~~mi~Nf~~~i~-------------------~~GfIPNg~R~--------Yyl~------ 201 (554)
T PLN02567 156 WDSYWVI-RGLLASKMYETAKGVVENLLYLVD-------------------TYGFVPNGARA--------YYTN------ 201 (554)
T ss_pred HHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHH-------------------HcCcCCCCCcc--------cccC------
Confidence 3554443 777744 67999999999999873 25888975432 3311
Q ss_pred cccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-h------CCCC--CCCccCCCC-----------------
Q 038924 587 KDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ-F------DKDG--DGMIENEGF----------------- 640 (920)
Q Consensus 587 ~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~-~------d~d~--dGL~e~~G~----------------- 640 (920)
.--.|.+..+|..+++.|+|.+||++++|.+++-.+|..+ . |.+| ++|+.+...
T Consensus 202 RSQPPlla~mV~~~~~~t~d~~~l~~~lp~L~~E~~~W~~~~~~v~i~~~~g~~~~L~rY~~~~~~PrpEsyreD~~~a~ 281 (554)
T PLN02567 202 RSQPPLLSAMVLAVYAATKDVELVRRALPALLKEHAFWTSGRHTVTIRDANGVVHVLSRYYAMWDKPRPESSRIDKEVAS 281 (554)
T ss_pred CCCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhcCCcceeeecCCCCcCCCcccccCCCCCCCccccccHHHHh
Confidence 2345678999999999999999999999999998886432 1 2111 244543100
Q ss_pred --C----------------CCccCC---cCccc-----------hhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Q 038924 641 --P----------------DQTYDA---WSANG-----------VSAYCGGLWVAALQAASALANDVGDHASASYFWVRY 688 (920)
Q Consensus 641 --~----------------d~t~D~---w~~~G-----------~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a 688 (920)
+ ..++|. |...+ .++=++++.+.+-+.+++||+.+|+.+.+++|++.+
T Consensus 282 ~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~ti~t~~i~pVDLNa~L~~~e~~LA~la~~lG~~~~a~~~~~~A 361 (554)
T PLN02567 282 KFSSSSEKQQLYRDIASAAESGWDFSSRWMRDGSNLTTLRTTSILPVDLNAFLLKMELDIAFFAKLLGDKATAERFLKAA 361 (554)
T ss_pred cCCCchHHHHHHHHHHHHHHcCCCchhhhccccccccccccccccCccHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 0 012331 11000 224579999999999999999999999999999999
Q ss_pred HHHHHHHhh-hccCC---eeeEcCCCCCCc---------cccccccchhhHHHHHhCCCCCCCHH--HHHHHHHHHHHhc
Q 038924 689 QKAKAVYDS-LWNGS---YFNYDNSDGSSS---------TSIQADQLAGQWYARACGLLPIADEA--KVKKALTKIYDFN 753 (920)
Q Consensus 689 ~~~k~~~~~-lWng~---yy~~D~~~~~~~---------~~i~~dql~Gq~~a~~~GL~~i~~~e--~~~saL~~v~~~n 753 (920)
++.+++|++ +||++ ||.||....... ..-+..--...+++..+| +++++ ++.++++.+.+..
T Consensus 362 ~~~~~aI~~~lWdee~G~y~Dydl~~~~~~~~~~~~~~~~~~~~~~~~s~f~PLw~g---~~~~~~~~a~~v~~~l~~~~ 438 (554)
T PLN02567 362 KARKRAINAVLWNEEMGQWLDYWLPPNGATCQESYTWDAENQNTNVYASNFVPLWCG---VVPPGDAKVEKVVESLKSSG 438 (554)
T ss_pred HHHHHHHHHHhcCcccCeEEeeccccccccccccccccccccccCccHHHHHHHHcC---CCChhhHHHHHHHHHHHhcc
Confidence 999999999 99854 666875432110 000001123467888899 45543 5677777665422
Q ss_pred cccccCCccccccccCCCC-cccCCCCccCCCcchHHHHHHHHHHHcCCHH---HHHHHHHHHHH---HhhhcCCCCCCC
Q 038924 754 VLKVKGGMCGAMNGMQPDG-RIDMSGLQAREIWPGVTYGLAASMIQEEMVD---MAFQTAAGVYE---VAWSEDGLGYSF 826 (920)
Q Consensus 754 v~~~~~g~~G~~~g~~p~G-~~~~~~~~s~~vW~g~~y~lAa~mi~~G~~e---eA~~~~~~i~~---~~~~~~g~G~~~ 826 (920)
+. . ..|++......| .++.| ++|+-+++.+..+|.++|..+ .|.+++....+ ..|.+ .|
T Consensus 439 l~---~-pgGiptsl~~sg~qWdgP-----n~W~pl~~l~i~GL~~yG~~ea~~lA~~la~rwl~~~~~~~~~--tg--- 504 (554)
T PLN02567 439 LV---L-PAGIATSLRNTGQQWDFP-----NAWAPLQHMIVEGLAASGSKEGKALAEDIARRWLRSNYVAYKK--TG--- 504 (554)
T ss_pred Cc---c-CCcccCCCCCccccCCCC-----CcCHhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHh--cC---
Confidence 21 1 123322221111 22222 699999999999999999875 67766443222 22354 23
Q ss_pred CCCcCccCC
Q 038924 827 QTPESWNNN 835 (920)
Q Consensus 827 ~~PE~~~~~ 835 (920)
..-|-|+..
T Consensus 505 ~m~EkYd~~ 513 (554)
T PLN02567 505 AMHEKYDAR 513 (554)
T ss_pred ceEEeECCC
Confidence 245767664
No 20
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 37 GH37 from CAZY comprises enzymes with only one known activity; trehalase (3.2.1.28 from EC). Trehalase is the enzyme responsible for the degradation of the disaccharide alpha,alpha-trehalose yielding two glucose subunits []. It is an enzyme found in a wide variety of organisms and whose sequence has been highly conserved throughout evolution.; GO: 0004555 alpha,alpha-trehalase activity, 0005991 trehalose metabolic process; PDB: 2JJB_B 2WYN_B 2JG0_A 2JF4_A 3C67_A 3D3I_B 3C69_A 3C68_A 2Z07_B.
Probab=99.20 E-value=7e-10 Score=131.34 Aligned_cols=262 Identities=19% Similarity=0.301 Sum_probs=165.8
Q ss_pred ccchhHHHHHH-hhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCccccc
Q 038924 509 DVHFYSSFALV-MLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWK 587 (920)
Q Consensus 509 DV~fYas~al~-~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~ 587 (920)
|.+|- ..+|+ .-..+++|+|++.|+..+.+ .|.||+.-.. +|-. .
T Consensus 133 DSYfi-~~GLl~s~~~~~a~~mi~Nf~~~i~~-------------------yGfipNg~R~--------Yyl~------R 178 (512)
T PF01204_consen 133 DSYFI-ILGLLASGMYETAKGMIENFLYLIDR-------------------YGFIPNGNRT--------YYLN------R 178 (512)
T ss_dssp HHHHH-HHHHHHTT-HHHHHHHHHHHHHHHHH-------------------HSS--SBSBG--------GGTT-------
T ss_pred hHHHH-HHHHHHcCCHHHHHHHHHHHHHHHHH-------------------hCcCCCCccH--------Hhcc------C
Confidence 54444 36765 56799999999999998731 5788885432 3322 2
Q ss_pred ccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HH-hhCCCCCCCcc----C-------CCCCC------------
Q 038924 588 DLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAY-ME-QFDKDGDGMIE----N-------EGFPD------------ 642 (920)
Q Consensus 588 D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~-l~-~~d~d~dGL~e----~-------~G~~d------------ 642 (920)
--.|.|..+|..||+.|+|.+||++++|.+++=.+| +. +.+..-.|+.. + ...++
T Consensus 179 SQPPlla~mV~~~y~~t~d~~~l~~~lp~L~ke~~fW~~~~r~~~~~~~~~~~~l~ry~~~~~~prpEsy~eD~~~a~~~ 258 (512)
T PF01204_consen 179 SQPPLLAQMVREYYEATKDKAFLREALPALEKEYEFWMDNNRDVRVTGLGKGYGLNRYGDPWNSPRPESYREDVETAENF 258 (512)
T ss_dssp --S--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHCCCEEETTEEEECTSEECCHHHHCHHCT-CCCCCHHHHHHHCH
T ss_pred CCCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHCCCCcceeecCCCccCCcccccCCCCCCcchHHHhhHHHHHhh
Confidence 345668999999999999999999999999988885 42 23322223321 0 00000
Q ss_pred ------------------CccCC---cCcc-c--------------hhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Q 038924 643 ------------------QTYDA---WSAN-G--------------VSAYCGGLWVAALQAASALANDVGDHASASYFWV 686 (920)
Q Consensus 643 ------------------~t~D~---w~~~-G--------------~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~ 686 (920)
.+||- |-.. | ..+=+|++.|...+.+++||+.||+.+.|+.|++
T Consensus 259 ~~~~~~~~~y~~i~saaESGwDfssRw~~~sg~d~~~l~~~~t~~iipVDLNa~L~~~e~~LA~~a~~lG~~~~a~~~~~ 338 (512)
T PF01204_consen 259 PSERDKEELYRDIASAAESGWDFSSRWFRDSGFDNSNLFTIRTTDIIPVDLNAILYRNEKDLAEFAELLGDQEKAEEYRQ 338 (512)
T ss_dssp CHTSTCHHHHCHHHHHHHCCHHCTGGGBSSECCEE-TCHHCECCCEE-HHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHH
T ss_pred cccchHHHHhhcccchhhhhhhccceeeecCCCchhhhhccceeeecCchHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 01111 1111 2 2234799999999999999999999999999999
Q ss_pred HHHHHHHHHhh-hccC---CeeeEcCCCCCCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcc
Q 038924 687 RYQKAKAVYDS-LWNG---SYFNYDNSDGSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMC 762 (920)
Q Consensus 687 ~a~~~k~~~~~-lWng---~yy~~D~~~~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~ 762 (920)
+|++.+++|++ |||. -||.||........... ...+++..+| +++++++.+.++.+.+..... +...
T Consensus 339 ~A~~~~~aI~~~lWdee~g~~~Dyd~~~~~~~~~~~----~a~f~PL~ag---~a~~~qa~~~~~~~l~~~~~~--~~l~ 409 (512)
T PF01204_consen 339 RAEERKEAINQYLWDEEDGFYYDYDLRTGKRSPVFS----PANFLPLWAG---IASPEQAERLVARALDYLERS--GLLT 409 (512)
T ss_dssp HHHHHHHHHHHHTEETTTTEE--EETTTTEEGG--B----GGGGHHHHTT----S-HHHHHHHHHHHHHHCTTC--CSSC
T ss_pred HHHHHHHHHHHhCccCCCCeEEeeeCCCCCCccccc----HHHHHHHHHh---hcCHhhhhhHHHHHHHHHHhc--CCcc
Confidence 99999999999 9984 37778876432222222 2355788999 789999877777777754421 1100
Q ss_pred ccccccCCCCcccCCCCccC--CCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 038924 763 GAMNGMQPDGRIDMSGLQAR--EIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVA 816 (920)
Q Consensus 763 G~~~g~~p~G~~~~~~~~s~--~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~ 816 (920)
. .+-.|....+ +..|=+ ++|+-.++.+..+|.++|..+.|.++++...+..
T Consensus 410 -~-~~g~~ts~~~-~~~qWD~Pn~WaPlq~~~i~GL~~yG~~~lA~~la~rwl~~~ 462 (512)
T PF01204_consen 410 -F-PGGIPTSLYD-TGQQWDGPNVWAPLQWMAIEGLRRYGYRELARRLAQRWLRLN 462 (512)
T ss_dssp ---CSECTTCTTT-TTSTTSTTEEEHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH
T ss_pred -c-CCCCCCcccc-ccccCCCCCccHhHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 0 1111111111 233332 5799999999999999999999999999755544
No 21
>PRK13272 treA trehalase; Provisional
Probab=99.17 E-value=7.9e-09 Score=121.18 Aligned_cols=250 Identities=19% Similarity=0.236 Sum_probs=171.5
Q ss_pred HHHH-hhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccccccchHHH
Q 038924 516 FALV-MLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLNSKFV 594 (920)
Q Consensus 516 ~al~-~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n~~fi 594 (920)
.+|+ .-..+++|+|++.|+..+. ..|.||+.-.+ +|-. ..-.|.|.
T Consensus 171 ~GLl~s~~~~~a~~mi~Nf~~~i~-------------------~yGfIPNG~R~--------YYl~------RSQPP~l~ 217 (542)
T PRK13272 171 LGLVKSGQTTLSRQMLDNFAYLID-------------------TYGHIPNGNRT--------YYLS------RSQPPFFS 217 (542)
T ss_pred HhhhhcCcHHHHHHHHHHHHHHHH-------------------HcCcCcCCchh--------cccc------CCCchhHH
Confidence 5665 5678999999999999873 25888885443 3322 23456789
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHhhC--------------CCCCCCccCC-------------------C-
Q 038924 595 LQVYRDFVATGDKNFARAVWPSVYIAMAY-MEQFD--------------KDGDGMIENE-------------------G- 639 (920)
Q Consensus 595 l~v~ry~~~TGD~~fL~~~~p~v~~al~~-l~~~d--------------~d~dGL~e~~-------------------G- 639 (920)
.+|..|+..|||..+ ++..|.+++=.+| +.... .++.+|-.+. .
T Consensus 218 ~Mv~~~~~~t~d~~~-~~~lp~l~kEy~~Wm~~~~~~~~~~~~~~~v~~~~g~~L~rY~~~~~~PRpEsy~eD~~~a~~~ 296 (542)
T PRK13272 218 YMVELQAGVEGDAAY-QRYLPQLQKEYAYWMQGSDDLQPGQAARHVVRLADGSLLNRYWDERDTPRPEAWLHDTRTAAEA 296 (542)
T ss_pred HHHHHHHHhcChHHH-HHHHHHHHHHHHHHcCCCCCCCCccccceeEecCCCcchhhhcCCCCCCCChHHHHHHHHhcCc
Confidence 999999999999987 6789999887774 43221 2233332210 0
Q ss_pred --C------------CCCccCC---cCccc-----------hhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038924 640 --F------------PDQTYDA---WSANG-----------VSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKA 691 (920)
Q Consensus 640 --~------------~d~t~D~---w~~~G-----------~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~ 691 (920)
. ...+||. |-..+ ..+=+|++.|.+-+.++++++.+|+.+.+++|++.|++.
T Consensus 297 ~~~~~~~~Y~~l~a~aESGWDfSsRw~~~~~~L~~i~t~~IvpVDLNalL~~~e~~LA~~~~~lG~~~~a~~~~~~A~~r 376 (542)
T PRK13272 297 KDRPAAEVYRDLRAGAESGWDYSSRWLADGKTLASIRTTAIVPVDLNSLLYHLERTLAQACASSGLAACSQDYAALAQQR 376 (542)
T ss_pred ccCcHHHHHHHHHHHHhcCCCchhhhccccccccccCcccccCccHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 0 0123443 22111 245579999999999999999999999999999999999
Q ss_pred HHHHhh-hccCC--eeeEcCCCCCCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcccccccc
Q 038924 692 KAVYDS-LWNGS--YFNYDNSDGSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNGM 768 (920)
Q Consensus 692 k~~~~~-lWng~--yy~~D~~~~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~g~ 768 (920)
+++|++ |||+. ||.||-......+... ...+++..+| ++++++++++++.+....+. ..|++...
T Consensus 377 ~~aI~~~lWde~G~~~DYD~~~~~~~~~~s----~a~f~PLwag---~a~~~~a~~l~~~l~~~~l~-----~gGlpTt~ 444 (542)
T PRK13272 377 KQAIDAHLWNPAGYYADYDWQTRTLSEQVT----AAALYPLFAG---LASDDRAKRTADSVRAQLLR-----PGGLATTA 444 (542)
T ss_pred HHHHHHhccCcCceEEeeccCCCCcccccc----HHHHHHHHcC---CCCHHHHHHHHHHHHHhccC-----CCCcCCCC
Confidence 999999 99854 6667765432222221 3467888899 78899888887777543332 13333332
Q ss_pred CCCC-cccCCCCccCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 038924 769 QPDG-RIDMSGLQAREIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVA 816 (920)
Q Consensus 769 ~p~G-~~~~~~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~ 816 (920)
...| .+|.| ++|+-+++.+..+|.++|..+.|.++...-.+..
T Consensus 445 ~~sgqQWD~P-----N~WaPlq~i~i~GL~~yG~~~lA~~La~rwl~~~ 488 (542)
T PRK13272 445 LKTGQQWDEP-----NGWAPLQWVAVDGLRRYGEDALARTIGERFLAQV 488 (542)
T ss_pred CCccccCCCC-----CccHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 2112 23322 6899999999999999999999999888644433
No 22
>PLN02703 beta-fructofuranosidase
Probab=99.17 E-value=6.5e-09 Score=118.58 Aligned_cols=253 Identities=14% Similarity=0.149 Sum_probs=161.3
Q ss_pred cccCcccccccchHHHHHHHHHHHHhCCHHHHHHHH--HHHHHHHHHHHhhCCCCCCCccC-CCCCCCccCC-cCccchh
Q 038924 579 NLFNSSRWKDLNSKFVLQVYRDFVATGDKNFARAVW--PSVYIAMAYMEQFDKDGDGMIEN-EGFPDQTYDA-WSANGVS 654 (920)
Q Consensus 579 ~~~D~~~W~D~n~~fil~v~ry~~~TGD~~fL~~~~--p~v~~al~~l~~~d~d~dGL~e~-~G~~d~t~D~-w~~~G~s 654 (920)
..+|..+| ||+.++.|.+.|||.+|.++.. +.++++|+++...+-|...++.. +|. ...|- ..+.|..
T Consensus 254 ~pVDS~LW------WIIllraY~k~TgD~sf~e~~~~Q~gI~liL~LcLa~~Fd~fPtLlVpDgs--~miDRrMgv~G~P 325 (618)
T PLN02703 254 APVDSGLW------WIILLRAYGKCTGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGS--CMIDRRMGIHGHP 325 (618)
T ss_pred ccccchhH------HHHHHHHHHHhhccHHHhhhhhHHHHHHHHHHHHccCcCCCCceEeccCCC--chhccccCcCCcc
Confidence 45788888 9999999999999999999987 99999999997655544666653 221 13343 3568999
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHHHHhh-hccC-----CeeeE-----------------cCC-
Q 038924 655 AYCGGLWVAALQAASALANDVGDH-ASASYFWVRYQKAKAVYDS-LWNG-----SYFNY-----------------DNS- 709 (920)
Q Consensus 655 ay~~~l~~aAL~a~a~lA~~lGd~-~~a~~~~~~a~~~k~~~~~-lWng-----~yy~~-----------------D~~- 709 (920)
.|+++|||.||+++.+|-+.-.+. +...........++..+.+ +|.. +-|+| |..
T Consensus 326 LEiQaLfy~ALR~a~~~L~~~~~~~e~i~~i~~rl~~L~~hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP 405 (618)
T PLN02703 326 LEIQALFYSALVCAREMLTPEDGSVDLIRALNNRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIP 405 (618)
T ss_pred HHHHHHHHHHHHHHHHhcCccchHHHHHHHHhhhhhhhHHHHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcc
Confidence 999999999999998854332211 1112222222233444556 6631 11211 110
Q ss_pred -----------C------CCCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHH---hccccccCCccccccccC
Q 038924 710 -----------D------GSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYD---FNVLKVKGGMCGAMNGMQ 769 (920)
Q Consensus 710 -----------~------~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~---~nv~~~~~g~~G~~~g~~ 769 (920)
+ +...-..+-+ .+|..+|.++| +++++++++.|+.|.. .++ +.+-+..|..
T Consensus 406 ~WL~dwlp~~gGYligNv~Pa~mDfRff-sLGNlLAILs~---Lat~~Qs~aIm~lIe~~w~~Lv-----g~MPlkIcyP 476 (618)
T PLN02703 406 SWLVDFMPNRGGYLIGNLQPAHMDFRFF-TLGNLWSIVSS---LATNDQSHAILDLIEAKWAELV-----ADMPLKICYP 476 (618)
T ss_pred hHhhhhccccCceeeeeecccccccchh-hhhhHHHHHhc---CCCHHHHHHHHHHHHHHHHHHh-----ccCccccccC
Confidence 0 0000011222 35788888999 6899999999988876 222 2222222222
Q ss_pred C-C--------C-cccCC--CCccCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCcCccCC-C
Q 038924 770 P-D--------G-RIDMS--GLQAREIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNN-D 836 (920)
Q Consensus 770 p-~--------G-~~~~~--~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~-~ 836 (920)
| . | .+++. ++|++-.||.+...+.+++++.|..+.|.+.++.+-++. .++ .+ ||-|++. |
T Consensus 477 aie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~~aA~iK~Gr~~lA~ral~~ae~rl-~~d----~W--pEYyDGktG 549 (618)
T PLN02703 477 AMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMGRPEIAEKAVELAERRI-SLD----KW--PEYYDTKRA 549 (618)
T ss_pred CcCCccceeeeCcCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh-hhc----cC--hhhccCCCC
Confidence 2 1 1 12332 679999999999999999999999999999998887777 443 23 9988885 4
Q ss_pred CCCccccchhhHHHHHHHHH
Q 038924 837 EYRSLCYMRPLTIWAMQWAL 856 (920)
Q Consensus 837 ~~r~~~Y~r~~a~w~~~~Al 856 (920)
++-|- =.|--+.|++.-.|
T Consensus 550 r~iGk-qar~yQTWSiAGyL 568 (618)
T PLN02703 550 RFIGK-QARLYQTWSIAGYL 568 (618)
T ss_pred cCcce-eccccCchHHHHHH
Confidence 44221 12457788876544
No 23
>PRK13270 treF trehalase; Provisional
Probab=99.08 E-value=4.8e-08 Score=115.04 Aligned_cols=262 Identities=15% Similarity=0.165 Sum_probs=175.4
Q ss_pred HHHH-hhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccccccchHHH
Q 038924 516 FALV-MLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLNSKFV 594 (920)
Q Consensus 516 ~al~-~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n~~fi 594 (920)
.+|+ .-..+++|+|++.|+..+. ..|.||+.-.. +|-. ..-.|.|.
T Consensus 182 ~GLl~sg~~~~a~~mi~Nf~~li~-------------------~yGfIPNG~R~--------YYl~------RSQPP~l~ 228 (549)
T PRK13270 182 LGLAESGREDLLKCMADNFAWMIE-------------------NYGHIPNGNRT--------YYLS------RSQPPVFA 228 (549)
T ss_pred HHhhhcCcHHHHHHHHHHHHHHHH-------------------HcCcCcCCchh--------cccc------CCCCHhHH
Confidence 6665 5678999999999999873 25888885543 3322 23446678
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHhhC--------------CCCCCCccCC---------------------
Q 038924 595 LQVYRDFVATGDKNFARAVWPSVYIAMAY-MEQFD--------------KDGDGMIENE--------------------- 638 (920)
Q Consensus 595 l~v~ry~~~TGD~~fL~~~~p~v~~al~~-l~~~d--------------~d~dGL~e~~--------------------- 638 (920)
.+|..|++ .|.+++++..|.+++=.+| +.+.. .++.+|-.+.
T Consensus 229 ~Mv~~y~~--~~~~~~~~~lp~l~~E~~fWm~~~~~~~~~~~~~~~v~~~~g~~L~rY~~~~~~PRpEsyreD~~~a~~~ 306 (549)
T PRK13270 229 LMVELFEE--DGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDGSLLNRYWDDRDTPRDESWLEDVETAKHS 306 (549)
T ss_pred HHHHHHHh--cCHHHHHHHHHHHHHHHHHHcCCCCccCcccccceeEecCCCCccccccCCCCCCCCchhHHHHHhhccc
Confidence 88877665 5789999999999988775 43221 2344444321
Q ss_pred CCC------------CCccCC---cCccc-----------hhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q 038924 639 GFP------------DQTYDA---WSANG-----------VSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKAK 692 (920)
Q Consensus 639 G~~------------d~t~D~---w~~~G-----------~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k 692 (920)
+.+ ..+||. |-..+ ..+=+|++.|.+-+.+++||+.+|+.+.+++|++.|++.+
T Consensus 307 ~rp~~~~Y~~lra~aESGWDfSsRW~~~~~~L~~i~T~~iipVDLNaiL~~~e~~LA~~a~~lG~~~~a~~~~~~A~~r~ 386 (549)
T PRK13270 307 GRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLYKLESAIANISALKGEKETEALFRQKASARR 386 (549)
T ss_pred CCchHHHHHHHHHHHHcCCCchhhcccCCcccccccccCcchhhHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 000 123342 11001 3445799999999999999999999999999999999999
Q ss_pred HHHhh-hccCC---eeeEcCCCCCCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcccccccc
Q 038924 693 AVYDS-LWNGS---YFNYDNSDGSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNGM 768 (920)
Q Consensus 693 ~~~~~-lWng~---yy~~D~~~~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~g~ 768 (920)
++|++ |||++ ||.||-.+... +.. -...+++..+| +++++++.+.++.+....+. ..|++...
T Consensus 387 ~AI~~~LWnee~G~~~DYD~~~~~~-~~~----s~a~f~PLwaG---~a~~~qa~~l~~~l~~~ll~-----pGGl~tS~ 453 (549)
T PRK13270 387 DAVNRYLWDDENGIYRDYDWRREQL-ALF----SAAAIVPLYVG---MANHEQADRLANAVRSRLLT-----PGGILASE 453 (549)
T ss_pred HHHHHhccCcccCeEEecccccCcc-ccc----cHHHHHHHHhC---CCCHHHHHHHHHHHHHhccc-----CCCcCCCC
Confidence 99999 99854 66677654322 211 23567888899 68888888777776543331 12333332
Q ss_pred CCCC-cccCCCCccCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHH---hhhcCCCCCCCCCCcCccCC
Q 038924 769 QPDG-RIDMSGLQAREIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEV---AWSEDGLGYSFQTPESWNNN 835 (920)
Q Consensus 769 ~p~G-~~~~~~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~---~~~~~g~G~~~~~PE~~~~~ 835 (920)
...| .+|.| ++|+-+++.+..+|.++|..+.|.++++.-.+. .|.+. | ...|-|+..
T Consensus 454 ~~sgqQWD~P-----N~WaPlqwmiieGL~ryG~~~lA~~LA~rwl~~~~~~~~~~--g---~m~EKYdv~ 514 (549)
T PRK13270 454 YETGEQWDKP-----NGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYQEH--H---KLIEKYHIA 514 (549)
T ss_pred CCCcccCCCC-----CCCccHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhc--C---eeEEEecCC
Confidence 2222 23322 689999999999999999999999988764443 33442 2 245666653
No 24
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases. This is a unique enzyme that hydrolyses core 1-type O-glycan from glycoproteins. The proteins are produced in the gut-flora bacteria from Actinobacteria and Firmicutes [].; GO: 0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
Probab=99.06 E-value=3.1e-08 Score=110.49 Aligned_cols=252 Identities=16% Similarity=0.209 Sum_probs=160.4
Q ss_pred ccCcccccccchHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHH--hhCCCCCCCccCCCC--CCCccCCcCccch
Q 038924 580 LFNSSRWKDLNSKFVLQVYRDFVATGDKNFARA--VWPSVYIAMAYME--QFDKDGDGMIENEGF--PDQTYDAWSANGV 653 (920)
Q Consensus 580 ~~D~~~W~D~n~~fil~v~ry~~~TGD~~fL~~--~~p~v~~al~~l~--~~d~d~dGL~e~~G~--~d~t~D~w~~~G~ 653 (920)
.+|..+| +|+.+..|.+.|||.+|.++ +-.-++.+|+-+. .||.-..=|+ .+|. -|--+ .+.|.
T Consensus 114 pVDs~~W------WiillraY~k~tgD~s~~~~~~~Q~gi~liL~lcL~~~Fd~~PtLlv-pDg~~MiDRrM---gv~G~ 183 (436)
T PF12899_consen 114 PVDSGLW------WIILLRAYVKATGDYSLAESPEVQRGIRLILDLCLADGFDMFPTLLV-PDGACMIDRRM---GVYGH 183 (436)
T ss_pred CcccccH------HHHHHHHHHHHhcchhhhhcHHHHHHHHHHHHHHcccccCCCceEEe-cCCceeecccc---cccCC
Confidence 3788999 99999999999999999976 3555555555543 3553222221 1221 12223 35799
Q ss_pred hhHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHHHHhh-hcc-----CCeeeEcCC-----------------
Q 038924 654 SAYCGGLWVAALQAASALANDV-GDHASASYFWVRYQKAKAVYDS-LWN-----GSYFNYDNS----------------- 709 (920)
Q Consensus 654 say~~~l~~aAL~a~a~lA~~l-Gd~~~a~~~~~~a~~~k~~~~~-lWn-----g~yy~~D~~----------------- 709 (920)
..++++|.|.||+++.+|-+.- +.++..++-.+....++..+.+ +|- .+-|+|...
T Consensus 184 PlEiQ~Lf~~aLr~a~~ll~~~~~~~~~~~~i~~rl~~L~~h~r~~yWld~~~ln~iyr~~teey~~~a~N~fNi~p~~i 263 (436)
T PF12899_consen 184 PLEIQALFYMALRCARELLKPDEEGKDLIERIDKRLHALSFHIREYYWLDLKRLNEIYRYKTEEYGHTAVNKFNIYPDSI 263 (436)
T ss_pred cchHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhccHhhhhhhhhhcccCCcccc
Confidence 9999999999999999986643 2234445566666777777888 993 123443110
Q ss_pred ------------C------CCCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhc--cccccCCccccccccC
Q 038924 710 ------------D------GSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYDFN--VLKVKGGMCGAMNGMQ 769 (920)
Q Consensus 710 ------------~------~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~n--v~~~~~g~~G~~~g~~ 769 (920)
+ ++..-..+-+ .+|..+|.++| +++++++++.|+.|.+.. ++ +.+-+-.|..
T Consensus 264 p~wl~dwlp~~gGY~ignv~P~~~dfRff-~lGNlLAiLsg---Lat~~qa~~I~~lIe~~~~~L~----g~mPlki~yP 335 (436)
T PF12899_consen 264 PDWLFDWLPEKGGYFIGNVSPARMDFRFF-SLGNLLAILSG---LATPEQAEAIMDLIEERWEDLV----GPMPLKICYP 335 (436)
T ss_pred hHHHHHhcccCCceeEeeccccccceeeh-hhhhHHHHHhc---CCCHHHHHHHHHHHHHHHhhhc----cccchhhccC
Confidence 0 0000011222 35778888999 689999999999887752 21 1111111111
Q ss_pred C---C------C-cccCC--CCccCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCcCccCC-C
Q 038924 770 P---D------G-RIDMS--GLQAREIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNN-D 836 (920)
Q Consensus 770 p---~------G-~~~~~--~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~-~ 836 (920)
+ . | .+++. ++|++-.||.+...+.+++++.|..+.|.+.+...-++. .++ +-||-|++. |
T Consensus 336 ale~~eWri~tg~dpKN~PwsYHNGG~WP~LlW~~~aA~ik~gr~~lA~~al~~a~~rL-~~d------ewpEyydGktG 408 (436)
T PF12899_consen 336 ALEGEEWRIYTGCDPKNTPWSYHNGGSWPVLLWFLTAALIKMGRPELAERALEAAENRL-SKD------EWPEYYDGKTG 408 (436)
T ss_pred CCCCCCCccccCcCcCccccccccCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh-ccc------CCcccccCCCC
Confidence 1 0 1 22332 678899999999999999999999999998888766665 432 358888774 4
Q ss_pred CCCcccc-chhhHHHHHHHHHcC
Q 038924 837 EYRSLCY-MRPLTIWAMQWALTK 858 (920)
Q Consensus 837 ~~r~~~Y-~r~~a~w~~~~Al~g 858 (920)
++ ... .|.-+.|++...|..
T Consensus 409 rp--~Gkqar~~QTWSaAgyLlA 429 (436)
T PF12899_consen 409 RP--MGKQARKYQTWSAAGYLLA 429 (436)
T ss_pred Cc--ccccccccCchHHHHHHHH
Confidence 33 222 256799998877654
No 25
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63 (GH63 from CAZY). They catalyse the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase 3.2.1.106 from EC is the first enzyme in the N-linked oligosaccharide processing pathway. ; GO: 0004573 mannosyl-oligosaccharide glucosidase activity, 0009311 oligosaccharide metabolic process
Probab=98.35 E-value=5.3e-05 Score=94.06 Aligned_cols=306 Identities=15% Similarity=0.204 Sum_probs=165.0
Q ss_pred HHHHHhhcHHHHHHHHHHHHHHhhccCCC--ceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccccccc-h
Q 038924 515 SFALVMLFPKLELSIQRDFAAAVMMHDPG--TMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLN-S 591 (920)
Q Consensus 515 s~al~~l~PeL~r~~l~~fa~~~~~~d~~--~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n-~ 591 (920)
.+.+..-.|+|++.++....+.+. +|+- +.+++ |.-+ +-.||-.+-+ +.. ...| |
T Consensus 407 ~L~i~~wD~dls~eil~sWl~lm~-~dGWIpREQIL--G~EA----rskVP~eF~v------------Q~p---~~ANPP 464 (801)
T PF03200_consen 407 QLLISRWDPDLSLEILASWLDLMN-EDGWIPREQIL--GEEA----RSKVPAEFQV------------QYP---SNANPP 464 (801)
T ss_pred hhhHHHhCHHHHHHHHHHHHHhcc-ccCCchhhhhc--CHhH----HhcCCHHHHc------------CCC---CCCCCc
Confidence 366778889999999998877763 2210 01111 1111 1123432221 111 1333 3
Q ss_pred HHHHHHHHHHH---Hh--------CCHHHHHHHHHHHHHHHHHHHh-hCCCCCCCccCCCCCCC------------ccCC
Q 038924 592 KFVLQVYRDFV---AT--------GDKNFARAVWPSVYIAMAYMEQ-FDKDGDGMIENEGFPDQ------------TYDA 647 (920)
Q Consensus 592 ~fil~v~ry~~---~T--------GD~~fL~~~~p~v~~al~~l~~-~d~d~dGL~e~~G~~d~------------t~D~ 647 (920)
.+++++-+... .. .+.+||+++||.+++..+|..+ ..-+-.|-..-.|.... +.|+
T Consensus 465 Tl~l~l~~ll~~~~~~~~~~~~~~~~~~~l~~~yp~L~~~~~wf~~tQ~G~~~~~yrWrGr~~~~~~~lnp~~L~SGlDD 544 (801)
T PF03200_consen 465 TLFLALEKLLDRLKAEKKSEDNSEEDLEFLRRIYPRLKRWYNWFNTTQAGDIPGSYRWRGRDPTTDRELNPHTLTSGLDD 544 (801)
T ss_pred cHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCceeEcCCCCCccccccccCcCCCCCC
Confidence 35666655532 22 3679999999999999999853 21111111111232211 3455
Q ss_pred cCcc--c----hhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCC---eeeEcCCCC------
Q 038924 648 WSAN--G----VSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNGS---YFNYDNSDG------ 711 (920)
Q Consensus 648 w~~~--G----~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~---yy~~D~~~~------ 711 (920)
.+.. + .++-..+....+-+.|++||..||.++.+.+|.+.++.+.+++++ .||++ ||.+.....
T Consensus 545 YPRa~~p~~~e~hvDl~sWMa~~a~~M~~IA~~L~~~d~~~ef~~~~~~i~~~l~~~hWdeedgfYyD~~~~~~~v~l~~ 624 (801)
T PF03200_consen 545 YPRASHPSDSERHVDLTSWMAFFALNMARIALELGKEDDAYEFFEHFEYISDALNKLHWDEEDGFYYDVGLHPDAVRLEW 624 (801)
T ss_pred CCCCCCCCccceechHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCCcccCceeeeccccccceecc
Confidence 4421 1 223356666778899999999999999888899999999999999 99864 444321110
Q ss_pred ------------------CCccccccccchhh--HHHHHhCCCCCCC--HHHHHHHHHHHHH--hccccccCCccccccc
Q 038924 712 ------------------SSSTSIQADQLAGQ--WYARACGLLPIAD--EAKVKKALTKIYD--FNVLKVKGGMCGAMNG 767 (920)
Q Consensus 712 ------------------~~~~~i~~dql~Gq--~~a~~~GL~~i~~--~e~~~saL~~v~~--~nv~~~~~g~~G~~~g 767 (920)
.........+ .|. .++.++| +++ .++.++.|+.+.+ ....++ |++-+.-.
T Consensus 625 ~~~~~~~~~~~~~~r~~~~~~~~~~v~~-~Gyvsl~Plll~---ll~~ds~~L~~~L~~l~D~~ef~s~y--GirSLSk~ 698 (801)
T PF03200_consen 625 KEVLENGQFRRELVRVVRGEPQLQLVCH-FGYVSLFPLLLG---LLPPDSERLERLLERLLDEDEFWSPY--GIRSLSKS 698 (801)
T ss_pred cccccccccchhheecccCCccccceee-ecccCCCchhhc---cCCCCHHHHHHHHHHhcChhhccCCC--CCccccCC
Confidence 0000001111 121 1234555 344 4577888888873 333332 11111000
Q ss_pred --cC-CCCcccCCCCccCCCcchHHHHHHHHHHHcCC-----HHHHHHHHHHHHHH-------hhhcCCCCCCCCCCcCc
Q 038924 768 --MQ-PDGRIDMSGLQAREIWPGVTYGLAASMIQEEM-----VDMAFQTAAGVYEV-------AWSEDGLGYSFQTPESW 832 (920)
Q Consensus 768 --~~-p~G~~~~~~~~s~~vW~g~~y~lAa~mi~~G~-----~eeA~~~~~~i~~~-------~~~~~g~G~~~~~PE~~ 832 (920)
++ +.+.-..+++=.|.||.-++|.+..+|.++|. .++|.++.+.+.++ -|.+ .|+ .=|.|
T Consensus 699 ~~~y~~~~~e~d~~YWRGpIW~~~NyL~i~aL~~y~~~~g~~~~~a~~~y~~Lr~nli~nv~~~~~~--tg~---~~E~Y 773 (801)
T PF03200_consen 699 DPFYGPGENEHDPSYWRGPIWIPINYLLIEALRRYGYYYGPYQERAKEIYKELRKNLINNVYKEYKR--TGY---FWEQY 773 (801)
T ss_pred CccccccCCccCCCcccCccchhhHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHhh--ccc---EEEeE
Confidence 00 11111123455668999999999999999983 45566554433322 2345 454 23777
Q ss_pred cCC-CCCCccccchhhHHHHHHHHH
Q 038924 833 NNN-DEYRSLCYMRPLTIWAMQWAL 856 (920)
Q Consensus 833 ~~~-~~~r~~~Y~r~~a~w~~~~Al 856 (920)
++. |+-.+. ++..-|+-+.+|
T Consensus 774 ~~~tG~g~g~---~~FtGWtslv~~ 795 (801)
T PF03200_consen 774 NPETGRGQGA---HPFTGWTSLVVL 795 (801)
T ss_pred CCCCCcccCC---CCCCchHHHHHH
Confidence 774 322111 256667665544
No 26
>PF06165 Glyco_transf_36: Glycosyltransferase family 36; InterPro: IPR010383 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyltransferase family 36 includes cellobiose phosphorylase (2.4.1.20 from EC), cellodextrin phosphorylase (2.4.1.49 from EC), and chitobiose phosphorylase. Many members of this family contain two copies of the domain represented in this entry.; PDB: 3QDE_A 3RRS_B 1V7V_A 1V7W_A 1V7X_A 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A ....
Probab=98.32 E-value=1.1e-06 Score=83.01 Aligned_cols=64 Identities=13% Similarity=0.214 Sum_probs=55.9
Q ss_pred cceEEeccceEEEEeecCCCCeEEEEEEEcccccCCCCCCCCCEEEEEEEEEeCCCCeEEEEEEEEeccccCC
Q 038924 171 CTYHALFPRAWTVYDGEPDPELRIVCRQISPFIPHNYKESSFPASVFTFTLSNSGQTSADVTLLFTWANSVAG 243 (920)
Q Consensus 171 ~~Y~~lyP~a~t~y~~~~~~~i~v~~~~~SP~IP~d~kdSSlPv~vf~~~v~N~~~~~~~vsl~~~~~n~~G~ 243 (920)
..|+++|+.++++|+ ....+|+++++. |||.+. |+.+..++|+|+|+++++++|+.++|..+|.
T Consensus 30 ~~y~~~~g~g~~~f~-~~~~gi~~~~~v---~V~~~~-----~vEi~~l~l~N~~~~~r~L~vtsy~E~vL~~ 93 (110)
T PF06165_consen 30 DEYEVRHGFGYTRFE-REDGGIETELTV---FVPPDD-----PVEIRRLRLTNTSNRPRRLSVTSYAEWVLGS 93 (110)
T ss_dssp SEEEEEEESSEEEEE-EEETTEEEEEEE---E--TTS-----SEEEEEEEEEE-SSS-EEEEEEEEEEEEEES
T ss_pred CcEEEEECCCeEEEE-EEeCCEEEEEEE---EEcCCC-----CEEEEEEEEEECcCCcEEEEEEEEEEEecCC
Confidence 479999999999999 689999999999 677784 9999999999999999999999999999884
No 27
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 15 GH15 from CAZY comprises enzymes with several known activities; glucoamylase (3.2.1.3 from EC); alpha-glucosidase (3.2.1.20 from EC); glucodextranase (3.2.1.70 from EC). Glucoamylase (GA) catalyses the release of D-glucose from the non-reducing ends of starch and other oligo- or poly-saccharides. Studies of fungal GA have indicated 3 closely-clustered acidic residues that play a role in the catalytic mechanism []. This region is also conserved in a recently sequenced bacterial GA []. The 3D structure of the pseudo-tetrasaccharide acarbose complexed with glucoamylase II(471) from Aspergillus awamori var. X100 has been determined to 2.4A resolution []. The protein belongs to the mainly-alpha class, and contains 19 helices and 9 strands. This protein is found in higher organisms, and is represented by phosphorylase kinase subunits.; GO: 0004339 glucan 1,4-alpha-glucosidase activity, 0005976 polysaccharide metabolic process; PDB: 1GAI_A 1GAH_A 1LF6_B 1LF9_A 3EQA_A 1AYX_A 2F6D_A 2FBA_A 1DOG_A 1GLM_A ....
Probab=98.12 E-value=7e-05 Score=87.99 Aligned_cols=186 Identities=19% Similarity=0.298 Sum_probs=121.9
Q ss_pred cccchHHHHHHHHHHHHhCCHHHHHHHHHH--HHHHHHHHHh-hCCCCCCCccCCCCCCCccCCcC-ccchhhH--HHHH
Q 038924 587 KDLNSKFVLQVYRDFVATGDKNFARAVWPS--VYIAMAYMEQ-FDKDGDGMIENEGFPDQTYDAWS-ANGVSAY--CGGL 660 (920)
Q Consensus 587 ~D~n~~fil~v~ry~~~TGD~~fL~~~~p~--v~~al~~l~~-~d~d~dGL~e~~G~~d~t~D~w~-~~G~say--~~~l 660 (920)
.|+...+++++++|.+ ....+...+|+. |+..++|+.+ |+. ..+|.|+ ..|.+-| ....
T Consensus 125 ~D~~gl~l~~l~~~~~--~g~~~~~~~~~~~~I~~~~~yi~~~w~~-------------pd~dlWEe~~g~~~f~~S~~~ 189 (448)
T PF00723_consen 125 NDGPGLRLLALWQYID--SGLQIIYTYWEVSFIKNDLDYIERNWRE-------------PDFDLWEERNGIHFFTASSAM 189 (448)
T ss_dssp THHHHHHHHHHHHHHH--TTHHHHHTHHHHHTHHHHHHHHHHHTTS-------------BEE-TTSS-EEEEHH--HHHH
T ss_pred CCchHHHHHHHHHHHH--cCCCcccccchhHHHHHHHHHHHHHcCC-------------cCCccccccCCCCccchhHHH
Confidence 6999999999999932 337888889999 9999999865 654 2678898 4688888 8888
Q ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH------hh-hccCC-eee-EcCC----CC---CCccccccccchh
Q 038924 661 WVAALQAASALANDVGDHASASYFWVRYQKAKAVY------DS-LWNGS-YFN-YDNS----DG---SSSTSIQADQLAG 724 (920)
Q Consensus 661 ~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~------~~-lWng~-yy~-~D~~----~~---~~~~~i~~dql~G 724 (920)
.++||..++++|+.+|+...+++|++.++++++.+ ++ +|+.. +|. .+.. .. ...+.+.+.-
T Consensus 190 ~~~AL~~a~~~a~~~g~~~~~~~~~~~a~~i~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~sl--- 266 (448)
T PF00723_consen 190 QWAALLRAANLAELFGDPGDAERWRETADEIRERLEGWYGLERGFWPEFGYFIRIYGSFSGNSEQVQGYRSGLDASL--- 266 (448)
T ss_dssp HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHEESGGGBTTSSBESEESSSEETTTCCEEEGSGS-BTHH---
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhhhhccccccccCCCCeEEEecCCccccchhhhcchhhHHHHH---
Confidence 89999999999999999999999999999999999 35 78654 343 3222 10 0112222211
Q ss_pred hHHHHHhCCCCCCCH----------HHHHHHHHHHHHhcccccc--CC-----ccccccccCCCCcccCCCCccCCCcch
Q 038924 725 QWYARACGLLPIADE----------AKVKKALTKIYDFNVLKVK--GG-----MCGAMNGMQPDGRIDMSGLQAREIWPG 787 (920)
Q Consensus 725 q~~a~~~GL~~i~~~----------e~~~saL~~v~~~nv~~~~--~g-----~~G~~~g~~p~G~~~~~~~~s~~vW~g 787 (920)
..+...|+.+ .+. +++...+..|.+.+-.... .+ ...+....+.++ ..-.+++|..
T Consensus 267 -ll~~~~~~~~-~~d~~~~~~~p~sp~~~~T~~~i~~~l~~~~~in~g~~~~~~~RY~~D~y~~~-----~~~~G~pw~l 339 (448)
T PF00723_consen 267 -LLLPLFGFVP-PDDVDDERFQPHSPRVLNTLKAIEEELRVDYPINPGDIDPGIGRYPEDVYDDG-----LGSEGNPWFL 339 (448)
T ss_dssp -HHHHHTTSST-TT-S-TTTTTTTSHHHHHHHHHHHHCTTTTEGGGTT-STTSEBSCTT--GGSS-----SBTGS-CBHH
T ss_pred -HHHHHccCCC-cccccccccccccHHHHHHHHHHHHHHHHhcCCCccccCccceecccccccCc-----cCCCCcccee
Confidence 2344566532 244 7889999999887654321 01 112222222111 1226799999
Q ss_pred HHHHHHHHHH
Q 038924 788 VTYGLAASMI 797 (920)
Q Consensus 788 ~~y~lAa~mi 797 (920)
.+++.|..++
T Consensus 340 ~T~w~ae~l~ 349 (448)
T PF00723_consen 340 CTFWAAEALY 349 (448)
T ss_dssp HHHHHHHHHH
T ss_pred eechhHHHHH
Confidence 9999665554
No 28
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.06 E-value=0.00055 Score=79.28 Aligned_cols=250 Identities=15% Similarity=0.190 Sum_probs=163.5
Q ss_pred HHHH-hhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccccccchHHH
Q 038924 516 FALV-MLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLNSKFV 594 (920)
Q Consensus 516 ~al~-~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n~~fi 594 (920)
+.|+ .-.-++++.|+..|+..+.. .|.||+.... +|-+ ..-.|-|-
T Consensus 182 lGL~esgr~d~a~~Mv~nF~~~Ie~-------------------yG~IpNgnRt--------YyLs------RSQPPff~ 228 (558)
T COG1626 182 LGLAESGRWDLAKGMVDNFAYEIET-------------------YGHIPNGNRT--------YYLS------RSQPPFFA 228 (558)
T ss_pred HHHhhcCcHHHHHHHHHHHHHHHHH-------------------hccccCCcee--------eEee------cCCCCcHH
Confidence 4444 44568889999988887732 4666775432 2222 23334478
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-H------------hhCCCCCCCc---cCC-----CCC------------
Q 038924 595 LQVYRDFVATGDKNFARAVWPSVYIAMAYM-E------------QFDKDGDGMI---ENE-----GFP------------ 641 (920)
Q Consensus 595 l~v~ry~~~TGD~~fL~~~~p~v~~al~~l-~------------~~d~d~dGL~---e~~-----G~~------------ 641 (920)
+++..+++-.| .+++++..|.+++..++. . +.-+.+||.+ +|+ ..+
T Consensus 229 ~Mv~~~~~~~g-~~~~~r~l~~~~key~~w~~~~~~l~~~~~~~~~~~~~dG~~pe~ln~y~dd~~tpr~Esy~~t~~~a 307 (558)
T COG1626 229 LMVELVAEHEG-VAALKRYLPALIKEYAYWMDGVPSLQPKQGYSRVVTLGDGSPPEVLNRYWDDRDTPRQESYHETIATA 307 (558)
T ss_pred HHHHHHHHhhc-HHHHHHHHHHHHHHHHHHhccCcccCccccceeEEecCCCCchhhhhhhhcccCCccchhhhhhHHHh
Confidence 88888998888 677888888888877653 2 1225567884 221 000
Q ss_pred -------------------CCccCC---cC-c----------cchhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Q 038924 642 -------------------DQTYDA---WS-A----------NGVSAYCGGLWVAALQAASALANDVGDHASASYFWVRY 688 (920)
Q Consensus 642 -------------------d~t~D~---w~-~----------~G~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a 688 (920)
-.++|. |. + .=..++.+++.+.-.+..+.+.++.|+.+.++.|++.+
T Consensus 308 ~~~~~r~~~eiy~~dRA~reSGwD~ssRw~g~~~~LasIrt~~~~p~dlna~~y~~e~~~~~~~~~~~~~~~~e~~~~~A 387 (558)
T COG1626 308 KHNPERPLDEIYRDDRAGRESGWDFSSRWLGVPAPLASIRTTSILPVDLNALLYKLEEIIANISAIKGDKETAERYQRKA 387 (558)
T ss_pred hcCcCCChHhhhcchhhhHhccCcccccccCCCccccceeccccchhhhhhHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 011221 10 0 01335679999999999999999999999999999999
Q ss_pred HHHHHHHhh-hccCC--ee-eEcCCCCCCccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcccc
Q 038924 689 QKAKAVYDS-LWNGS--YF-NYDNSDGSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGA 764 (920)
Q Consensus 689 ~~~k~~~~~-lWng~--yy-~~D~~~~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~ 764 (920)
+.=+++|++ +|+.+ +| .||-.......-.. +.-.|+...| +.+++|+++..+.+...+.++ .|+
T Consensus 388 ~~R~~aI~~ylW~~e~G~~~DYd~k~~~~~~y~~----a~~~~plw~G---~a~~era~~~a~~~~~~l~~p-----GGl 455 (558)
T COG1626 388 EARRCAINKYLWDDEAGQYNDYDWKLKKRRAYLS----AAALWPLWVG---LATPERAQRLADAALSMLEQP-----GGL 455 (558)
T ss_pred HHHHHHHHHHccccccceeehhhhhccccccccc----hhhhhhccCC---CCCHHHHHHHHHHHHHHhcCC-----Cce
Confidence 999999999 99753 44 36654221111111 1233455567 678999999988887755432 345
Q ss_pred ccccCCCC-cccCCCCccCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 038924 765 MNGMQPDG-RIDMSGLQAREIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVA 816 (920)
Q Consensus 765 ~~g~~p~G-~~~~~~~~s~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~ 816 (920)
+.+...+| .+|.| +.|.-.......++.++|....|.+++++...++
T Consensus 456 ~ast~~s~~QWD~P-----NgWaPlq~ia~~gL~ryG~~~la~~ia~rwL~~v 503 (558)
T COG1626 456 SASTPRSGQQWDYP-----NGWAPLQWIATQGLKRYGYDILADDIARRWLTNV 503 (558)
T ss_pred ecccccccccccCC-----CCCccHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 44444443 34444 7898888787889999999999999998744433
No 29
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.02 E-value=0.00016 Score=85.26 Aligned_cols=269 Identities=19% Similarity=0.263 Sum_probs=165.3
Q ss_pred HHHH-hhcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccccccchHHH
Q 038924 516 FALV-MLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLNSKFV 594 (920)
Q Consensus 516 ~al~-~l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n~~fi 594 (920)
-+|+ .---+.+|+|++.|..-+. ..|.||+.-.+ +|... .-.|.+-
T Consensus 196 ~GLl~S~m~~takGmieNf~~lV~-------------------~yG~ipNg~R~--------YYl~R------SQPPllt 242 (600)
T KOG0602|consen 196 KGLLASQMFDTAKGMIENFISLVD-------------------TYGFIPNGGRV--------YYLNR------SQPPLLT 242 (600)
T ss_pred HhHHhhcccHHHHHHHHHHHHHHH-------------------hcCcccCCCee--------eeecc------CCCchhh
Confidence 4554 3456788999998887652 15777875432 33322 3456688
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHH-HHH--hhCCCCCCCccC------CCCC------------------------
Q 038924 595 LQVYRDFVATGDKNFARAVWPSVYIAMA-YME--QFDKDGDGMIEN------EGFP------------------------ 641 (920)
Q Consensus 595 l~v~ry~~~TGD~~fL~~~~p~v~~al~-~l~--~~d~d~dGL~e~------~G~~------------------------ 641 (920)
.+++.||+.|+|.+|+++..|.+.+=++ |.. +-+.-.+|.+.+ .|..
T Consensus 243 ~Mv~~~y~~t~~~~~~~~~l~tl~kEy~fw~~~~~~~~~~~~~~l~~y~~~~~~prPEsy~~d~e~~e~~~t~~~~~~~~ 322 (600)
T KOG0602|consen 243 GMVYEYYEATNDEQFLKRALPTLIKEYEFWTNNRTEDVKDEGKVLSRYRVMGSGPRPESYREDFETAEHLKTEKEKQQLY 322 (600)
T ss_pred hhHHHhhhccCcHHHHHHHHHHHhhheecccCCCccccccCCceeEEEeccCCCCCCcchHHHHHHHhcccchHHHHHHH
Confidence 9999999999999999999999988777 442 233322332221 1111
Q ss_pred -------CCccCC---c-Cccc----------hhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hc
Q 038924 642 -------DQTYDA---W-SANG----------VSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LW 699 (920)
Q Consensus 642 -------d~t~D~---w-~~~G----------~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lW 699 (920)
.+++|. | .+.| +.+=+++|+...+..|+.+....|+.+.++.|++++++.+.+|++ +|
T Consensus 323 ~~l~~~aesg~DfSsrw~~~~~t~~~~~t~~~vpvDLN~~~~~~~~i~~y~~~~~Gd~~~s~~~~~k~~~r~~~i~~vlW 402 (600)
T KOG0602|consen 323 QDLAAAAESGWDFSSRWFAVNGTLSSIGTTDLVPVDLNLLYKWNADIMKYFYVVDGDPKDSAQFEKKSEQRRAAIQEVLW 402 (600)
T ss_pred HHHhhcCcccchhHHHhhccCCcccccccccccccchHHHHHhhHHHHhhhcccCCChhHHHHHHHHHHHHHHHHHHhcc
Confidence 122332 1 1122 112257888899999999999999999999999999999999999 99
Q ss_pred cC---CeeeEcCCCCCCccccccccchhhHHHHHhCCCCCCCHH-HHHHHHHHHHHhccccccCCccccccccCCCCccc
Q 038924 700 NG---SYFNYDNSDGSSSTSIQADQLAGQWYARACGLLPIADEA-KVKKALTKIYDFNVLKVKGGMCGAMNGMQPDGRID 775 (920)
Q Consensus 700 ng---~yy~~D~~~~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e-~~~saL~~v~~~nv~~~~~g~~G~~~g~~p~G~~~ 775 (920)
|. -||.||......+....+. ..++..+|.-+..+++ .+.+++..+.+.-+. ..+-|+ |... .
T Consensus 403 de~~g~w~DYd~~~~~~~~~~~~s----n~~Pl~~~~~~~~~~~~~~~~v~~~le~~g~~-------~~p~gi-P~Sl-~ 469 (600)
T KOG0602|consen 403 DEEDGAWFDYDLELKKHNTYFYAS----NFAPLWAGCYPAPDDDKSVDKVLDYLEKSGAL-------TFPGGI-PTSL-S 469 (600)
T ss_pred CCCCCcceeccccccccCCCcCch----hhhhhhccCCCcccccchHHHHHHHHHHcCCc-------CCCCCC-cccC-C
Confidence 74 4888887643323222222 2244556754333344 455565555443222 222222 2111 1
Q ss_pred CCCCccC--CCcchHHHHHHHHHHHcC---CHHHHHHHHHHHHHH---hhhcCCCCCCCCCCcCccCC
Q 038924 776 MSGLQAR--EIWPGVTYGLAASMIQEE---MVDMAFQTAAGVYEV---AWSEDGLGYSFQTPESWNNN 835 (920)
Q Consensus 776 ~~~~~s~--~vW~g~~y~lAa~mi~~G---~~eeA~~~~~~i~~~---~~~~~g~G~~~~~PE~~~~~ 835 (920)
.++.|=+ ++|+-....+-.++++.| ..+.|++++..-... .|.. .| ..+|-++..
T Consensus 470 ~s~eQWD~Pn~WaP~q~m~~~gl~~~~~~~~~~~A~kla~~wl~~~~~~~~~--~g---~~~EKY~vt 532 (600)
T KOG0602|consen 470 NSGEQWDFPNGWAPNQHMAIEGLRRAGNQELQEVALKLAQRWLETNFAVFVD--SG---GMFEKYDVT 532 (600)
T ss_pred CchhhccCCCCCCcceehhhhhhhhcCCHHHHHHHHHHHHHHHHHhhhhhcc--cC---ceeEeeccc
Confidence 2233333 789888888889999999 788888887742222 2233 22 356666654
No 30
>PF06205 GT36_AF: Glycosyltransferase 36 associated family ; InterPro: IPR010403 This domain is found in the NvdB protein (P20471 from SWISSPROT), which is involved in the production of beta-(1-->2)-glucan.; PDB: 1V7V_A 1V7W_A 1V7X_A 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A ....
Probab=97.77 E-value=0.0001 Score=67.23 Aligned_cols=80 Identities=18% Similarity=0.200 Sum_probs=47.6
Q ss_pred cCCCCCCceEEEEEecCCCeEEEe-eCccccCCCCCccchHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeeEEEEEEeEe
Q 038924 271 TANGRPPVTFAVAAEETADVHVSE-CPCFLLSGNSKGITAKDMWNEIKKHGSFDHLDNDKTSPSEPGSSIGAAIAASLTI 349 (920)
Q Consensus 271 ~~~~~~~~~~aiaa~~~~~v~vt~-~~~f~~~~~~~~~~~~~~W~~f~~~G~l~~~~~~~~~~s~~g~~~~aAva~~~~l 349 (920)
.++......+++++...+.++++. +..|++.+ ++...|..+ +.+.|++. ...+.++|+|+++.++|
T Consensus 4 ~~~~~~~~~~af~~~~~~~~s~~tdR~~FiGr~-~~~~~P~al-----~~~~Ls~~-------~g~~~Dpc~al~~~v~L 70 (90)
T PF06205_consen 4 EYNPWFAHRVAFLAASEPPISFETDRAEFIGRG-GSLSNPAAL-----ERGALSNS-------EGAGLDPCAALQVRVTL 70 (90)
T ss_dssp TTT-TTTTEEEEEEESS--SEEEEEHHHHH-TT---CCC-HHH-----HHTS---B---------BSS-EEEEEEEEEEE
T ss_pred CCccccCccEEEEecCCCCceEEcCHHHhCCCC-cCccCCcCc-----cCCCCCCC-------ccCCcCeEEEEEEEEEE
Confidence 333344566777766666667644 45677643 445566652 55677664 67788999999999999
Q ss_pred cCCCEEEEEEEEee
Q 038924 350 PSGSTRSVTFSLAW 363 (920)
Q Consensus 350 ~pge~~tv~F~LaW 363 (920)
+||++++|.|+|+-
T Consensus 71 ~PGe~~~v~f~lG~ 84 (90)
T PF06205_consen 71 EPGEEKEVVFLLGA 84 (90)
T ss_dssp -TT-EEEEEEEEEE
T ss_pred CCCCEEEEEEEEEE
Confidence 99999999999996
No 31
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2P0V_B 3QSP_B 3QPF_A 3QRY_A 3ON6_A 3QT9_A 3QT3_A 2NVP_A 3P2C_B.
Probab=97.50 E-value=0.0012 Score=75.39 Aligned_cols=237 Identities=19% Similarity=0.226 Sum_probs=130.3
Q ss_pred ccchHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHHH-----hhCCCCCCCcc-C-----------------CCCCC-
Q 038924 588 DLNSKFVLQVYRDFVATGDKNFARAV-WPSVYIAMAYME-----QFDKDGDGMIE-N-----------------EGFPD- 642 (920)
Q Consensus 588 D~n~~fil~v~ry~~~TGD~~fL~~~-~p~v~~al~~l~-----~~d~d~dGL~e-~-----------------~G~~d- 642 (920)
|.-.-||-..|.||+.|||.+|+.+- ..+++.+++=++ .++.|+++..- + .|.+-
T Consensus 128 DSL~~~l~La~~y~~~Tgd~~~f~~~~~~A~~~il~~~~~eq~~t~~~~~~~~~s~Y~F~R~~~~~tdtl~~~G~G~pv~ 207 (424)
T PF06824_consen 128 DSLCYFLQLAYQYWKATGDTSFFDEDWLRAVRLILDTWRTEQRPTYDEDHEGLPSPYRFQRPTCRPTDTLPNDGRGNPVA 207 (424)
T ss_dssp HHHHHHHHHHHHHHHHH--GTTSSHHHHHHHHHHHHHHHHTTG------SSSCS-S---BESBSSGGGS-HHHHT-S---
T ss_pred hhhhHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHhhhccccccCCCcceeeccCCCCCccccCCCcCCcCC
Confidence 66667999999999999999998664 456777776442 24554443211 0 01110
Q ss_pred ------Cc---cCCcCccchhhHHHHHHHHHHHHHHHHHHHcCCch---HHHHHHHHHHHHHHHHhh-hc-c----CCee
Q 038924 643 ------QT---YDAWSANGVSAYCGGLWVAALQAASALANDVGDHA---SASYFWVRYQKAKAVYDS-LW-N----GSYF 704 (920)
Q Consensus 643 ------~t---~D~w~~~G~say~~~l~~aAL~a~a~lA~~lGd~~---~a~~~~~~a~~~k~~~~~-lW-n----g~yy 704 (920)
.. -|+-...|-.+.-|.+...+|+.+++|++.++..+ .+++.++++++++++|++ .- + |+-|
T Consensus 208 ~tGli~S~FRPSDDa~~y~yliPsNm~a~v~L~~laei~~~~~~~~~~~la~~~~~la~eI~~gI~~~giv~h~~~g~iy 287 (424)
T PF06824_consen 208 YTGLIWSGFRPSDDACIYPYLIPSNMFAVVALEYLAEILRALGWDDSAELAERARALADEIRAGIEKHGIVEHPKFGKIY 287 (424)
T ss_dssp -SSS-B-SB-TTSSB-SSSEEHHHHHHHHHHHHHHHHHHHHTT-THHHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEE
T ss_pred CCCceecCcCCCCcchhcCcCChHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHheEEeCCCCCeEE
Confidence 00 13335567667789999999999999999887655 899999999999999999 44 3 3456
Q ss_pred eEcCC--CCC--CccccccccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhc-cccccCCccccccccCCCCcccCCCC
Q 038924 705 NYDNS--DGS--SSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYDFN-VLKVKGGMCGAMNGMQPDGRIDMSGL 779 (920)
Q Consensus 705 ~~D~~--~~~--~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~n-v~~~~~g~~G~~~g~~p~G~~~~~~~ 779 (920)
.|... ++. .++. .+..|+. +-.+|.-. .+++--+.+-+.|.... .--+..|. +..|+ | +.
T Consensus 288 AYEVDG~G~~~~mDDA-NvPSLLS---lPylGf~~-~~DpvYqnTR~~iLS~~~NPyy~~G~--~~~Gi---G-----sP 352 (424)
T PF06824_consen 288 AYEVDGFGNHLLMDDA-NVPSLLS---LPYLGFCS-KDDPVYQNTRRFILSPEGNPYYFSGK--AASGI---G-----SP 352 (424)
T ss_dssp -SEE-SSS-EE----S-SSS-STT---HHHHTSS--TT-HHHHHHHHHHTSTT-STTEEEES--SEEEE----------T
T ss_pred EEEecCCCCccccCCC-CCchHhh---hhhcCCCC-CCcHHHHHHHHHHhCCCCCCccccCC--CcCCC---C-----CC
Confidence 66433 221 1222 2233432 11345322 35555566666666543 11111111 11111 2 33
Q ss_pred ccC--CCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCcCccCCCCCCccccchhhHHHH
Q 038924 780 QAR--EIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNNDEYRSLCYMRPLTIWA 851 (920)
Q Consensus 780 ~s~--~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~w~ 851 (920)
|++ .+||. +++...+-..+.+|..++++.+.++. .|.|+ .-|.|+.+. +..|-|+-=+|+
T Consensus 353 Ht~~~~iWPm---sl~~~~lTs~d~~Ei~~~L~~L~~t~---~gtGl---mHES~d~~~---~~~~TR~WFaWa 414 (424)
T PF06824_consen 353 HTPPGYIWPM---SLAMQGLTSDDDEEIRECLRMLKRTT---AGTGL---MHESFDVDD---PSKFTRPWFAWA 414 (424)
T ss_dssp TT-TTEEEHH---HHHHHHHT-S-HHHHHHHHHHHHHTS---TTSSS-----SEEETTE---EEEEE-S-BHHH
T ss_pred CCCCCCccHH---HHHHHHhcCCCHHHHHHHHHHHHhcc---CCCCc---eeccccCCC---CcccCcHHHHHH
Confidence 444 68982 22222233356788888999888877 56775 668888874 678888877775
No 32
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]
Probab=97.21 E-value=0.031 Score=67.89 Aligned_cols=293 Identities=15% Similarity=0.105 Sum_probs=160.9
Q ss_pred hcHHHHHHHHHHHHHHhhccCCCceeeecCCcchhcccCCCCccCCCCCCCCcccccccccCcccccccchHHHHHHHHH
Q 038924 521 LFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKCLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLNSKFVLQVYRD 600 (920)
Q Consensus 521 l~PeL~r~~l~~fa~~~~~~d~~~~~~~~~g~~~~rk~~G~vPhd~G~~~Pw~~~~~y~~~D~~~W~D~n~~fil~v~ry 600 (920)
-.-.-+|.++..||.... .|.||+-++.. .-++||+.|..-| |+.++..|
T Consensus 1099 GRy~EAr~iIlaFa~tlr--------------------HGLIPNLLd~G----~~~RyNcRDA~W~------wl~~Iq~Y 1148 (1521)
T KOG3625|consen 1099 GRYVEARNIILAFAGTLR--------------------HGLIPNLLDEG----IYARYNCRDAVWW------WLQCIQDY 1148 (1521)
T ss_pred cchHHHHHHHHHHHHHhh--------------------ccccchhhhcc----ccccccchHHHHH------HHHHHHHH
Confidence 356678999999998762 47788755431 1268999988888 88888888
Q ss_pred HHHhCC-HH----------------------HHHHHHHHHHHHHHHH-H--h---------hC---C-----------CC
Q 038924 601 FVATGD-KN----------------------FARAVWPSVYIAMAYM-E--Q---------FD---K-----------DG 631 (920)
Q Consensus 601 ~~~TGD-~~----------------------fL~~~~p~v~~al~~l-~--~---------~d---~-----------d~ 631 (920)
++..-| .+ |=.-+.+.+++||+-. . + .| . ..
T Consensus 1149 ve~vPnG~~ILkd~VsRiyP~DDs~v~~pgaf~q~L~evi~Eal~kH~qGiqfRErnAGpqiD~~M~DeGFnv~~gV~~~ 1228 (1521)
T KOG3625|consen 1149 VEMVPNGLDILKDPVSRIYPTDDSAVLPPGAFDQPLFEVIQEALQKHFQGIQFRERNAGPQIDRNMKDEGFNVTAGVDEE 1228 (1521)
T ss_pred HHhCCChhhhhhCchheeCCCCCcccCCCchhhHHHHHHHHHHHHHHhccccchhccCCcccchhhhccCcceeeccccc
Confidence 765432 22 2244556666666532 1 1 11 0 11
Q ss_pred CCCccCCCCC---CCccC--------------CcCccchhhHHHHHHHHHHHHHHHHHHHc------------CCchHHH
Q 038924 632 DGMIENEGFP---DQTYD--------------AWSANGVSAYCGGLWVAALQAASALANDV------------GDHASAS 682 (920)
Q Consensus 632 dGL~e~~G~~---d~t~D--------------~w~~~G~say~~~l~~aAL~a~a~lA~~l------------Gd~~~a~ 682 (920)
.|++. +|.. ..++| +.+..|..+.+++|-++||+.+.++++.- |+.. .=
T Consensus 1229 TGfv~-GGn~~NCGTWMDKMGeSerAgnkG~PaTPRDGsAVEi~GL~~salrfl~elkek~ifpy~~Ve~k~~g~~~-k~ 1306 (1521)
T KOG3625|consen 1229 TGFVY-GGNRFNCGTWMDKMGESERAGNKGIPATPRDGSAVEIVGLSKSALRFLLELKEKNIFPYHGVEVKRHGKAI-KW 1306 (1521)
T ss_pred cceee-cCCccccchhhhhcccchhccCCCCCCCCCCCceeehhhhHHHHHHHHHHHHhcCCccccceEEecccccc-ee
Confidence 34444 1211 11223 11223677889999999999999999861 2111 12
Q ss_pred HHHHHHHHHHHHHhh-hc-cCCeee--------------E-cCCC---CCCccccccccchhhHHHHHhCCCCCCCHHHH
Q 038924 683 YFWVRYQKAKAVYDS-LW-NGSYFN--------------Y-DNSD---GSSSTSIQADQLAGQWYARACGLLPIADEAKV 742 (920)
Q Consensus 683 ~~~~~a~~~k~~~~~-lW-ng~yy~--------------~-D~~~---~~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~~ 742 (920)
.|.+.++++++.|++ |+ +++=+. | |..+ ...+-..+++--. . +.=-|+++++++|
T Consensus 1307 s~~eW~qkiqdNFeK~ffV~ed~s~~~~~~~~~vnkr~IykDsygat~~~tDyQLR~NF~I--a---mtVAPeL~~pe~A 1381 (1521)
T KOG3625|consen 1307 SYDEWNQKIQDNFEKLFFVSEDPSDLNEKHPNLVNKRGIYKDSYGATSPWTDYQLRPNFTI--A---MTVAPELFTPEKA 1381 (1521)
T ss_pred cHHHHHHHHHhhhhheecccCCcchhhhhcccccchhheecccccCCCCccceeccCCcee--E---EEechhhcChHHH
Confidence 488999999999999 76 332220 2 1111 1112223332111 0 1112568999999
Q ss_pred HHHHHHHHHhcccc----ccCCccccccccCCCC-------cccCCCCccCC--CcchHHHHHHHHHHH--cC--CHHHH
Q 038924 743 KKALTKIYDFNVLK----VKGGMCGAMNGMQPDG-------RIDMSGLQARE--IWPGVTYGLAASMIQ--EE--MVDMA 805 (920)
Q Consensus 743 ~saL~~v~~~nv~~----~~~g~~G~~~g~~p~G-------~~~~~~~~s~~--vW~g~~y~lAa~mi~--~G--~~eeA 805 (920)
-+||+...+.++-+ +.++.-=...|.+-++ .-+.-.+|.+- +|+.--|.-|.+.+. .| -.+++
T Consensus 1382 ~kAle~AekvLlGPlGMkTlDP~D~nYr~yYdN~~Ds~d~~takG~NYHQGPEWlw~~GyfLrArl~f~~k~gp~~~~y~ 1461 (1521)
T KOG3625|consen 1382 WKALEIAEKVLLGPLGMKTLDPDDWNYRGYYDNALDSDDYNTAKGFNYHQGPEWLWPIGYFLRARLYFSRKMGPETTAYT 1461 (1521)
T ss_pred HHHHHHHHHHhcCcccccccChhhcccccccCCCccccchhhhccccccCCCceeehhHHHHHHHHHHHhhcCCchHHHH
Confidence 99999888877622 1111000001222221 01122567775 454333444444433 24 12222
Q ss_pred ----HHHHHHHHHHhhhcCCCCCCCCCCcCccCCCCCCccccchhhHHHHHHHHH
Q 038924 806 ----FQTAAGVYEVAWSEDGLGYSFQTPESWNNNDEYRSLCYMRPLTIWAMQWAL 856 (920)
Q Consensus 806 ----~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~w~~~~Al 856 (920)
...+++-+.++.. .-|.-+||+-|.++.||.. ..+.++||+..-|
T Consensus 1462 i~qv~~rL~~h~k~l~~----S~WrgLpELTN~ngeyC~d--Sc~tQAWSvacil 1510 (1521)
T KOG3625|consen 1462 IVQVKNRLSRHYKHLER----SPWRGLPELTNENGEYCPD--SCETQAWSVACIL 1510 (1521)
T ss_pred HHHHHHHHHHHHHHHhh----ccccCchhhccCCcCcccc--cchHhHHHHHHHH
Confidence 2233444444422 1155599999999999642 3489999986433
No 33
>cd07430 GH15_N Glycoside hydrolase family 15, N-terminal domain. Members of this family are N-terminal domains uniquely found in bacterial and archaeal glucoamylases and glucodextranases. Glucoamylase (glucan 1,4-alpha-glucosidase; 4-alpha-D-glucan glucohydrolase; amyloglucosidase; exo-1,4-alpha-glucosidase; gamma-amylase; lysosomal alpha-glucosidase; EC 3.2.1.3) hydrolyzes beta-1,4-glucosidic linkages of starch, glycogen and malto-oligosaccharides, releasing beta-D-glucose from the non-reducing end. Glucodextranase (glucan 1,6-alpha-glucosidase; exo-1,6-alpha-glucosidase; EC 3.2.1.70) uses an inverting reaction mechanism to hydrolyze alpha-1,6-glucosidic linkages of dextran and related oligosaccharides, releasing beta-D-glucose from the non-reducing end. These N-terminal domains adopt a structure consisting of antiparallel beta-strands, divided into two beta-sheets, with one sheet wrapped by an extended polypeptide, which appears to stabilize the domain. The function of these domains
Probab=96.67 E-value=0.19 Score=54.98 Aligned_cols=146 Identities=14% Similarity=0.208 Sum_probs=88.8
Q ss_pred ccceEEEEeecCCCCeEEEEEEEcccccCCCCCCCCCEEEEEEEEEeCCCCeEEEEEEEEeccccCCCCCCCCcccccce
Q 038924 177 FPRAWTVYDGEPDPELRIVCRQISPFIPHNYKESSFPASVFTFTLSNSGQTSADVTLLFTWANSVAGDSGLSGHHFNSKT 256 (920)
Q Consensus 177 yP~a~t~y~~~~~~~i~v~~~~~SP~IP~d~kdSSlPv~vf~~~v~N~~~~~~~vsl~~~~~n~~G~~~~~~~~~~n~~~ 256 (920)
=|.-.++++ +++.+++|+.+.|+. .+ .||-+-+++|+|.++ .++.+++...--++..+. -|..+
T Consensus 82 s~~~~~~~~-~~~~r~~i~k~~~td---P~-----r~vll~~v~~~~~~~--~~~~ly~~~~p~l~n~g~-----~nta~ 145 (260)
T cd07430 82 SLAYRLVNT-DKQGRYRLEKEIFTD---PD-----RDVLLMRVRFEALDG--GGLRLYVLLAPHLGNTGS-----GNTAW 145 (260)
T ss_pred CceEEEEEe-cCCCcEEEEEEEeCC---CC-----cCEEEEEEEEEecCC--CCeEEEEEECCcccCCCC-----CCEEE
Confidence 344566677 678899999998544 34 599999999999887 667766665544542211 12222
Q ss_pred ecccCceeEEEeeccCCCCCCceEEEEEecCCCeEEEeeCccccCCCCCccchHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q 038924 257 MTKDGVHGLTLHHRTANGRPPVTFAVAAEETADVHVSECPCFLLSGNSKGITAKDMWNEIKKHGSFDHLDNDKTSPSEPG 336 (920)
Q Consensus 257 ~~~~~~~Gv~l~~~~~~~~~~~~~aiaa~~~~~v~vt~~~~f~~~~~~~~~~~~~~W~~f~~~G~l~~~~~~~~~~s~~g 336 (920)
...+.-...|++.+. +..+||.+.. +=...|+- | ....+.|++|.+||+|+.. ....+
T Consensus 146 ~~~~~~~~~Lva~~~-----~~~lal~s~~-~f~~~svG--~--------~g~SDg~~DL~~~g~L~~~------~~~ag 203 (260)
T cd07430 146 VVDHGGRTALVASRG-----SVALALKASI-PFTRASVG--Y--------VGVSDGWQDLKRNGRMTWT------YDSAG 203 (260)
T ss_pred EecCCCcceEEEecC-----CeEEEEeCCC-CcceEeee--e--------eccChhHHHHHhCCccccc------ccccC
Confidence 211111234555432 2334444322 11111111 1 1125789999999998764 22233
Q ss_pred CCeeEEEEEEeEecCCCEEEEEEEEee
Q 038924 337 SSIGAAIAASLTIPSGSTRSVTFSLAW 363 (920)
Q Consensus 337 ~~~~aAva~~~~l~pge~~tv~F~LaW 363 (920)
. ++|+....|+|++++++.++|+.
T Consensus 204 ~---gnva~~~el~~~~~~~f~l~lgf 227 (260)
T cd07430 204 D---GNVALTGELPLGASTEFTLALGF 227 (260)
T ss_pred C---CcEEEEEEeCCCCceEEEEEEEe
Confidence 3 68889999999999999999986
No 34
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The family of glycosyl hydrolases (GH65 from CAZY) which contains this domain includes vacuolar acid trehalase and maltose phosphorylase. Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. The central domain is the catalytic domain, which binds a phosphate ion that is proximal the the highly conserved Glu. The arrangement of the phosphate and the glutamate is thought to cause nucelophilic attack on the anomeric carbon atom []. The catalytic domain also forms the majority of the dimerisation interface.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1H54_A.
Probab=95.98 E-value=0.025 Score=64.71 Aligned_cols=100 Identities=20% Similarity=0.349 Sum_probs=64.1
Q ss_pred cchHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHHH---hhCCCCCCCccCCCC--CCCccCCcCccchhhHHHHHHH
Q 038924 589 LNSKFVLQVYRDFVATGDKNFARAV-WPSVYIAMAYME---QFDKDGDGMIENEGF--PDQTYDAWSANGVSAYCGGLWV 662 (920)
Q Consensus 589 ~n~~fil~v~ry~~~TGD~~fL~~~-~p~v~~al~~l~---~~d~d~dGL~e~~G~--~d~t~D~w~~~G~say~~~l~~ 662 (920)
.|.-..+++++||..|||.+||++. +|.+..+.+|.. .++.+ +|..+-.+. || -|- ...-.++|++.+.-
T Consensus 106 i~adIa~a~~~Y~~~TgD~~~l~~~g~eil~etArfw~sr~~~~~~-~g~y~i~~V~GPD-EY~--~~V~NnayTN~ma~ 181 (370)
T PF03632_consen 106 INADIAYAIWQYYQATGDEEFLREYGAEILFETARFWASRVEYNED-TGRYEIRNVTGPD-EYH--ENVDNNAYTNAMAK 181 (370)
T ss_dssp HHHHHHHHHHHHHHHH---TTTTTHHHHHHHHHHHHHHHH-EEETT-TTEEE--SB--SS-TTS---SBS--HHHHHHHH
T ss_pred chHHHHHHHHHHHHhCCcHHHHHccCHHHHHHHHHHHHHheEEcCC-CCeEEecccCchh-ccc--CCCCCcHHHHHHHH
Confidence 4455789999999999999999875 999999999753 35543 244332111 22 121 22357899999999
Q ss_pred HHHHHHHHHHHHcCCc------hHHHHHHHHHHHHH
Q 038924 663 AALQAASALANDVGDH------ASASYFWVRYQKAK 692 (920)
Q Consensus 663 aAL~a~a~lA~~lGd~------~~a~~~~~~a~~~k 692 (920)
-.|+.++++++.+++. +..++|++.++++.
T Consensus 182 ~~L~~A~~~~~~~~~~~l~~~~~e~~~W~~ia~~i~ 217 (370)
T PF03632_consen 182 WNLRLAAEAAERLGEEKLGLTEEEPEKWKEIADKIY 217 (370)
T ss_dssp HHHHHHHHHHTTS-HHHHT--HHHHHHHHHHHHTB-
T ss_pred HHHHHHHHHHHHCchhhcCCCHHHHHHHHHHHhcCC
Confidence 9999999999999977 33455666655544
No 35
>COG3538 Uncharacterized conserved protein [Function unknown]
Probab=95.90 E-value=0.45 Score=52.94 Aligned_cols=251 Identities=16% Similarity=0.133 Sum_probs=132.3
Q ss_pred ccchHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHH-HHHhhCCC--------------CCCCccCC-CCC-------CC
Q 038924 588 DLNSKFVLQVYRDFVATGDKNFARAVWP-SVYIAMA-YMEQFDKD--------------GDGMIENE-GFP-------DQ 643 (920)
Q Consensus 588 D~n~~fil~v~ry~~~TGD~~fL~~~~p-~v~~al~-~l~~~d~d--------------~dGL~e~~-G~~-------d~ 643 (920)
|.-.-.|-..|-||+.|||.+-+.+-|- +++.+++ |-...|.. .|-|..++ |.+ ..
T Consensus 135 DSLCYPiqLAYl~wk~Tg~t~~Fde~f~~a~~~il~~~~~eQ~h~~~spY~F~R~t~r~~dTL~~~G~G~~~a~tGM~wS 214 (434)
T COG3538 135 DSLCYPIQLAYLYWKATGDTSQFDEDFRQAVETILRVWKVEQDHETDSPYRFERDTDRKSDTLGRAGKGAPTAPTGMTWS 214 (434)
T ss_pred cchhhHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHhHhhccCCCCCeeeeccccccchhhhhCCCCCCcCcccceec
Confidence 4444477888999999999876655443 4566665 32222211 12233221 111 11
Q ss_pred cc---CCcCccchhhHHHHHHHHHHHHHHHHHH-HcCCchHHHHHHHHHHHHHHHHhh-h-cc----CCeeeEcCCCCCC
Q 038924 644 TY---DAWSANGVSAYCGGLWVAALQAASALAN-DVGDHASASYFWVRYQKAKAVYDS-L-WN----GSYFNYDNSDGSS 713 (920)
Q Consensus 644 t~---D~w~~~G~say~~~l~~aAL~a~a~lA~-~lGd~~~a~~~~~~a~~~k~~~~~-l-Wn----g~yy~~D~~~~~~ 713 (920)
.+ |+-+..|-.+=.|.+.+--|.-+.+|.+ ..++.+.|+..+.+++++++.+++ . -+ |+.|.|..++..
T Consensus 215 gFRPSDDAC~YgYliPsNmFaVVvl~y~~ei~~~~~~~~~~a~~a~~L~~eIq~Gi~~~g~~~~~~~~~iyAyEVDG~G- 293 (434)
T COG3538 215 GFRPSDDACEYGYLIPSNMFAVVVLSYLQEILEALPHDAEIARQAKELANEIQQGIEQFGKMDHPKGGEIYAYEVDGLG- 293 (434)
T ss_pred CcCCCccchhcccccccchhhhhhHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHhceecCCCCCeeEEEEecCCC-
Confidence 11 2223444222236667777888888888 677888999999999999999998 3 32 567888665421
Q ss_pred ccccccccchhhH-HHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCccccccccCCCCcccCCCCcc--CCCcchHHH
Q 038924 714 STSIQADQLAGQW-YARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNGMQPDGRIDMSGLQA--REIWPGVTY 790 (920)
Q Consensus 714 ~~~i~~dql~Gq~-~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~g~~p~G~~~~~~~~s--~~vW~g~~y 790 (920)
+..+|-|.-...- -+-.+|.-. .+++--..+=+.|...-.--|..|. +.-|+ | +.|+ +.||+. .
T Consensus 294 n~l~MDDaNvPSLLa~PYLG~c~-~dDpvY~~TRk~iLS~eNPYy~eG~--~a~Gi---G-----SpHTp~~yvWpi-a- 360 (434)
T COG3538 294 NQLFMDDANVPSLLAAPYLGFCE-KDDPVYQNTRKTILSSENPYYYEGK--YASGI---G-----SPHTPDHYVWPI-A- 360 (434)
T ss_pred ceeeccCCCchhhhhhhhhcccc-CCCHHHHHHHHHHHhcCCCceecce--eeccC---C-----CCCCCCcccchH-H-
Confidence 1123322221110 122344322 2333333344444442210011111 11111 2 2333 379983 1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCcCccCCCCCCccccchhhHHHH------HHHHHcCCCCc
Q 038924 791 GLAASMIQEEMVDMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNNDEYRSLCYMRPLTIWA------MQWALTKPKLS 862 (920)
Q Consensus 791 ~lAa~mi~~G~~eeA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~w~------~~~Al~g~~~~ 862 (920)
||..-+-.-+..|-.+++..+...- +|.|+ .=|.|+.+. ...|-|+-=+|+ ++.-+.|.++.
T Consensus 361 -LaiqgLTa~D~~ek~~iL~~L~~td---aGTg~---MHE~f~vd~---P~~fTR~WFsWAN~mF~Elild~~~~~~~ 428 (434)
T COG3538 361 -LAIQGLTANDDSEKKEILDMLKATD---AGTGL---MHEGFDVDD---PEQFTREWFSWANMMFCELILDLAGIRPH 428 (434)
T ss_pred -HHHhhcccCChHHHHHHHHHHHhcc---CCccc---eecccCCCC---HHHhhhHHHHHHHHHHHHHHHHHhccccc
Confidence 2211122234566677777766544 77886 458888874 467889888886 23345565543
No 36
>PF08760 DUF1793: Domain of unknown function (DUF1793); InterPro: IPR014870 This domain is found at the C terminus of a glutaminase protein from fungi []. It is also found as a single domain protein in Bacteroides thetaiotaomicron.
Probab=94.10 E-value=0.35 Score=49.33 Aligned_cols=92 Identities=16% Similarity=0.230 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hc--cCCeee--EcCCCCCCccccccccchhhHHHHHhCCCCCCC
Q 038924 664 ALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LW--NGSYFN--YDNSDGSSSTSIQADQLAGQWYARACGLLPIAD 738 (920)
Q Consensus 664 AL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lW--ng~yy~--~D~~~~~~~~~i~~dql~Gq~~a~~~GL~~i~~ 738 (920)
+|+||++||+.+|+.+.+++|...|+...+...+ .. +|.+|. ||..++. +. +..-.|-+++||. ++|
T Consensus 2 Gi~A~s~ia~~~G~~~~a~~Y~~~A~~~a~~W~~~a~~~~g~H~~L~Y~~~~sW---sl----~YNL~~DkLLgl~-lfp 73 (171)
T PF08760_consen 2 GIGAMSEIASMLGHTEDAANYSDIAKSYASQWQTLAISTDGDHYTLAYDDPGSW---SL----KYNLYWDKLLGLN-LFP 73 (171)
T ss_pred hHHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHhhccCCCCeEEeecCCCCCc---cc----ccchHHHHhcCcC-CCc
Confidence 6899999999999999999999999999777777 77 688877 6654322 22 2223466778875 778
Q ss_pred HHHHHHHHHHHHHhccccccCCccccccccC
Q 038924 739 EAKVKKALTKIYDFNVLKVKGGMCGAMNGMQ 769 (920)
Q Consensus 739 ~e~~~saL~~v~~~nv~~~~~g~~G~~~g~~ 769 (920)
++-...-.+ .|.. + ....|++.+.|
T Consensus 74 ~~Vy~~q~~-~Y~~-~----~~~yGlPLDsR 98 (171)
T PF08760_consen 74 ESVYDMQSA-FYPT-V----QNKYGLPLDSR 98 (171)
T ss_pred HHHHHHHHH-HHHH-H----HHHcCCccCCC
Confidence 765543322 2222 1 23567766655
No 37
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=93.98 E-value=2.6 Score=48.18 Aligned_cols=96 Identities=15% Similarity=0.177 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh--hCCCCCCCccCCCCCCCccC-CcC--ccchhhHHHHHHHHHH
Q 038924 591 SKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ--FDKDGDGMIENEGFPDQTYD-AWS--ANGVSAYCGGLWVAAL 665 (920)
Q Consensus 591 ~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~--~d~d~dGL~e~~G~~d~t~D-~w~--~~G~say~~~l~~aAL 665 (920)
.=.|++..+.++.+||.++++ ..+++++++.+ +|++..|+.. .+| .+. ..++..|..++.+.|
T Consensus 56 ar~i~~~a~a~~~~~~~~~l~----~A~~~~~fl~~~~~d~~~Gg~~~-------~~~~~g~~~~~~~~l~~~a~~l~a- 123 (384)
T cd00249 56 ARQVYCFAVAYLLGWRPEWLE----AAEHGLEYLDRHGRDPDHGGWYF-------ALDQDGRPVDATKDLYSHAFALLA- 123 (384)
T ss_pred cHHHHHHHHHHHhcCChhHHH----HHHHHHHHHHHhCcCCCCCCEEE-------EEcCCCCCcccccchHHHHHHHHH-
Confidence 336778888999999988664 47888899865 4443235554 121 112 135567777666554
Q ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hcc--CCee
Q 038924 666 QAASALANDVGDHASASYFWVRYQKAKAVYDS-LWN--GSYF 704 (920)
Q Consensus 666 ~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWn--g~yy 704 (920)
++++++..|++ +|.+.|+++.+.+.+ +|+ |.+|
T Consensus 124 --la~~~~at~d~----~~l~~A~~~~~~l~~~~~~~~g~~~ 159 (384)
T cd00249 124 --AAQAAKVGGDP----EARALAEETIDLLERRFWEDHPGAF 159 (384)
T ss_pred --HHHHHHhcCCH----HHHHHHHHHHHHHHHHhccCCCccc
Confidence 45556666765 478889999999988 993 4454
No 38
>PRK13807 maltose phosphorylase; Provisional
Probab=93.70 E-value=1 Score=56.46 Aligned_cols=86 Identities=15% Similarity=0.213 Sum_probs=60.3
Q ss_pred cchHHHHHHHHHHHHhCCHHHHHH-HHHHHHHHHHHH-H--hhCCCCCCCccCCCC--CCCccCCcCccchhhHHHHHHH
Q 038924 589 LNSKFVLQVYRDFVATGDKNFARA-VWPSVYIAMAYM-E--QFDKDGDGMIENEGF--PDQTYDAWSANGVSAYCGGLWV 662 (920)
Q Consensus 589 ~n~~fil~v~ry~~~TGD~~fL~~-~~p~v~~al~~l-~--~~d~d~dGL~e~~G~--~d~t~D~w~~~G~say~~~l~~ 662 (920)
.|.-..+++++||..|||.+||++ -+|.+....+|- . .++.+ +|..+-.|. || -|- +..-.++|+|.+.-
T Consensus 426 I~adIaya~~~Y~~~TgD~~fl~~~G~e~l~etArfw~s~~~~~~~-~~~y~I~~V~GPD-EY~--~~vdNNayTN~ma~ 501 (756)
T PRK13807 426 RNGAIAYAIYNYTNYTGDESYLKEEGLEVLVEIARFWADRVHFSKR-KNKYMIHGVTGPN-EYE--NNVNNNWYTNYIAA 501 (756)
T ss_pred chHHHHHHHHHHHHHhCCHHHHHhcCHHHHHHHHHHHHHheEEeCC-CCeEEECCccccc-ccC--CCCCCchhHHHHHH
Confidence 456678999999999999999987 489999888864 3 25433 333332111 22 121 12347899999999
Q ss_pred HHHHHHHHHHHHcCCc
Q 038924 663 AALQAASALANDVGDH 678 (920)
Q Consensus 663 aAL~a~a~lA~~lGd~ 678 (920)
-.|+.++++++.++..
T Consensus 502 ~~l~~A~~~~~~l~~~ 517 (756)
T PRK13807 502 WTLEYTLENLDKVKKE 517 (756)
T ss_pred HHHHHHHHHHHHhchh
Confidence 9999999999877643
No 39
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]
Probab=92.40 E-value=7.3 Score=47.57 Aligned_cols=214 Identities=16% Similarity=0.175 Sum_probs=117.6
Q ss_pred hHHHHHHHHHHHHhC------C--HHHHHHHHHHHHHHHHHHHhhCCCCCCCcc-----------CCCCCC---------
Q 038924 591 SKFVLQVYRDFVATG------D--KNFARAVWPSVYIAMAYMEQFDKDGDGMIE-----------NEGFPD--------- 642 (920)
Q Consensus 591 ~~fil~v~ry~~~TG------D--~~fL~~~~p~v~~al~~l~~~d~d~dGL~e-----------~~G~~d--------- 642 (920)
|..+++++++++.-. | .+||+++||.+.+...|... +..|... +.|...
T Consensus 505 PTLllav~~~~~~~~~~~~~~~r~~~fL~r~fprLl~~f~Wf~~---sQ~G~~~~~~~~~n~~YrWrGR~~~~~t~lnp~ 581 (849)
T KOG2161|consen 505 PTLLLAVYRLLNREREMYGREDRSLTFLKRLFPRLLKWFTWFRK---SQEGKNVFEEGFDNEGYRWRGRDLPTGTTLNPH 581 (849)
T ss_pred ceeHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHhhhhhhh---cccCCcccccccccceeEeccCCCCCCceeccc
Confidence 346889998876432 2 39999999999999999752 1122222 223211
Q ss_pred ---CccCCcCc-cchhhH-----HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCC---eeeEcCC
Q 038924 643 ---QTYDAWSA-NGVSAY-----CGGLWVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNGS---YFNYDNS 709 (920)
Q Consensus 643 ---~t~D~w~~-~G~say-----~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~---yy~~D~~ 709 (920)
.+.|+-+. ..+++- +=+....|=+.+..+|+.+|..+....+...-+++++.+.+ .|+++ ||.|...
T Consensus 582 ~L~SGlDDyPRAs~Ps~~ElhvDl~~W~~lasrsl~~iae~lg~~~~E~~~a~~e~~~~e~L~~~HW~ee~~~y~D~g~h 661 (849)
T KOG2161|consen 582 CLSSGLDDYPRASHPSVLELHVDLRCWVGLASRSLNRIAEFLGETEAEYATAITELECKENLVQNHWSEEDQAYCDFGNH 661 (849)
T ss_pred cccccccccccccCchHHHHhhhhHHHHHHHHHHHHHHHHHhcchhhhhhhhhhHHHHHHHHHHhccChhhCeeeeccCC
Confidence 12343322 123321 34455667789999999999998444455666777899999 99864 5444221
Q ss_pred CCCC------------------------ccccccccchh-hHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCcccc
Q 038924 710 DGSS------------------------STSIQADQLAG-QWYARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGA 764 (920)
Q Consensus 710 ~~~~------------------------~~~i~~dql~G-q~~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~ 764 (920)
+.+. ...+..+++.- ..++.++.|-+ .+.++-.+.|+.|.+.+-. .+ .+|+
T Consensus 662 ~~dv~~~~~p~~g~~~r~~~r~v~~~~p~~e~v~~h~GYvSl~P~mlrLlp-~~S~rL~~~Ldli~D~~~l--wS-pYGl 737 (849)
T KOG2161|consen 662 TEDVSITPEPSIGKQFRGLVRRVDWFVPNLELVDRHIGYVSLFPFMLRLLP-ATSPRLTKLLDLISDENEL--WS-PYGL 737 (849)
T ss_pred hhhccccccCCcccchhhhheeccccCCcceeeecccceeehhhhHHhhcC-CCchHHHHHHHHhcCcccc--cC-cchh
Confidence 1000 00111111110 01123344322 5667778888877664431 11 1222
Q ss_pred ccccCCC---Cc---ccCCCCccCCCcchHHHHHHHHHHH-cCC-----HHHHHHHHHH
Q 038924 765 MNGMQPD---GR---IDMSGLQAREIWPGVTYGLAASMIQ-EEM-----VDMAFQTAAG 811 (920)
Q Consensus 765 ~~g~~p~---G~---~~~~~~~s~~vW~g~~y~lAa~mi~-~G~-----~eeA~~~~~~ 811 (920)
.--.+.+ |. =..+++-.|.+|.-++|.+-.+|.+ ++. ...|.++.+.
T Consensus 738 rSLS~~s~yym~~Nte~d~pYWRGpIW~N~NYLiLsaL~~~Y~~~~gp~~~nA~~iyeE 796 (849)
T KOG2161|consen 738 RSLSRSSPYYMKRNTEHDPPYWRGPIWMNVNYLILSALRHFYLYVPGPYQSNAAKIYEE 796 (849)
T ss_pred hhhhhcCCccccccCCCCCcccccceeeehHHHHHHHHHHhcccCCCchHHHHHHHHHH
Confidence 1111110 11 1224566779999999999999988 432 3455555553
No 40
>KOG4125 consensus Acid trehalase [Carbohydrate transport and metabolism]
Probab=92.01 E-value=0.86 Score=52.13 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=72.1
Q ss_pred ccchHHHHHHHHHHHHhCCHHHHHH-HHHHHHHHHHHHH---hhCCCCCCCccCCCCCCCccCCcCccchhhHHHHHHHH
Q 038924 588 DLNSKFVLQVYRDFVATGDKNFARA-VWPSVYIAMAYME---QFDKDGDGMIENEGFPDQTYDAWSANGVSAYCGGLWVA 663 (920)
Q Consensus 588 D~n~~fil~v~ry~~~TGD~~fL~~-~~p~v~~al~~l~---~~d~d~dGL~e~~G~~d~t~D~w~~~G~say~~~l~~a 663 (920)
-.|+..+++...|+..|.|.+|++. -||.++.+.+|.- .+++ ..++..-.+..+..-|- ..--.++|++++.=.
T Consensus 368 Hin~dv~~Af~~y~h~~~D~e~~~~t~Wpi~~~VA~F~~SRv~~~~-s~~~yHL~nVM~PDE~H-~~VNn~VYTNa~~k~ 445 (682)
T KOG4125|consen 368 HINVDVAMAFSIYLHEGIDDEYLRYTTWPIIKNVAQFFTSRVKYNS-SLGLYHLYNVMDPDEFH-NHVNNGVYTNAGIKT 445 (682)
T ss_pred EecHHHHHHHHHHHHhccchhhhccCCchhHHHHHHHhhheeEecC-ccceeeeeccCCchhcc-cccccchhhhHHHHH
Confidence 3456678899999999999999865 6999999999863 3553 23332211211100000 112357999999999
Q ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Q 038924 664 ALQAASALANDVGDHASASYFWVRYQKAKAVY 695 (920)
Q Consensus 664 AL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~ 695 (920)
+|+.|+.||+.+|.. .-.+|++.+++++--+
T Consensus 446 ~L~FA~~LA~hlG~~-~~~kW~eVsD~i~ipr 476 (682)
T KOG4125|consen 446 LLKFATDLANHLGEV-VDPKWSEVSDDIYIPR 476 (682)
T ss_pred HHHHHHHHHHhhCCc-cChhHHHhccCceecc
Confidence 999999999999955 3567888777665433
No 41
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=89.91 E-value=22 Score=40.55 Aligned_cols=89 Identities=13% Similarity=0.144 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hCCCCCC-CccCCCCCCCccCCcCccchhhHHHHHHHHHHHHHHH
Q 038924 593 FVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ-FDKDGDG-MIENEGFPDQTYDAWSANGVSAYCGGLWVAALQAASA 670 (920)
Q Consensus 593 fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~-~d~d~dG-L~e~~G~~d~t~D~w~~~G~say~~~l~~aAL~a~a~ 670 (920)
.+.+..++++.|||..+++. ++++++++.+ +- +.+| +.+. -..+ +. ...+.+.+. . -+.++.+
T Consensus 120 ~l~ala~~~~at~d~~~l~~----A~~~~~~l~~~~~-~~~g~~~~~-~~~~---~~-~~~~~~~~~--h---~~~all~ 184 (384)
T cd00249 120 ALLAAAQAAKVGGDPEARAL----AEETIDLLERRFW-EDHPGAFDE-ADPG---TP-PYRGSNPHM--H---LLEAMLA 184 (384)
T ss_pred HHHHHHHHHHhcCCHHHHHH----HHHHHHHHHHHhc-cCCCcccCC-CCCC---CC-CCCCCChhH--H---HHHHHHH
Confidence 57777789999999988764 5566666643 22 2233 3221 1111 11 122222221 1 1123555
Q ss_pred HHHHcCCchHHHHHHHHHHHHHHHHhh-hcc
Q 038924 671 LANDVGDHASASYFWVRYQKAKAVYDS-LWN 700 (920)
Q Consensus 671 lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWn 700 (920)
+++..|++ +|.+.++++.+.+.+ +++
T Consensus 185 l~~~tgd~----~~~~~A~~l~~~~~~~~~~ 211 (384)
T cd00249 185 AYEATGEQ----KYLDRADEIADLILDRFID 211 (384)
T ss_pred HHHHhCCH----HHHHHHHHHHHHHHHHhcC
Confidence 56667765 477788888888777 885
No 42
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=89.12 E-value=8.7 Score=43.38 Aligned_cols=159 Identities=17% Similarity=0.203 Sum_probs=81.7
Q ss_pred cccccccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCCCccCCCCCCCccCCcCccchhhHH--HHH
Q 038924 583 SSRWKDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQFDKDGDGMIENEGFPDQTYDAWSANGVSAYC--GGL 660 (920)
Q Consensus 583 ~~~W~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~~d~d~dGL~e~~G~~d~t~D~w~~~G~say~--~~l 660 (920)
...|.|...-.+..+.++.+.|||..+++....++....++ .+|+ .+||+... ...+.+..| ..+.|. ++.
T Consensus 119 ~~~wiD~~~M~~p~l~~~~~~tgd~~~~~~a~~q~~~~~~~--~~d~-~tGl~~h~-~~~~~~~~~---s~~~WsRG~gW 191 (336)
T PF07470_consen 119 NQVWIDGMYMNLPFLAWAGKLTGDPKYLDEAVRQFRLTRKY--LYDP-ETGLYYHG-YTYQGYADW---SDSFWSRGNGW 191 (336)
T ss_dssp TEEETTHHHHHHHHHHHHHHHHTGHHHHHHHHHHHHHHHHH--HB-T-TTSSBESE-EETTSSSTT---ST--BHHHHHH
T ss_pred CceeeccccccHHHHHHHHHHHCCcHHHHHHHHHHHHHHHh--ccCC-CCCceeec-cCCCCCcCc---ccccCcchhhH
Confidence 34567755334556667799999999999888888766666 3565 48988732 111122111 112343 455
Q ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhhcc--CCeee-EcCCC--CCCccccccccchhhH--HHHHhCC
Q 038924 661 WVAALQAASALANDVGDHASASYFWVRYQKAKAVYDSLWN--GSYFN-YDNSD--GSSSTSIQADQLAGQW--YARACGL 733 (920)
Q Consensus 661 ~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~lWn--g~yy~-~D~~~--~~~~~~i~~dql~Gq~--~a~~~GL 733 (920)
.+.+|..+.++.. .+.+....+.+.++++.+.+.++.+ |-|+. +|..+ ...+.| +..++.-- .....|
T Consensus 192 ~~~Gl~~~l~~lp--~~~~~~~~~~~~~~~~~~~l~~~q~~~G~w~~~~~~~~~~~~~etS--atA~~a~~l~~gi~~g- 266 (336)
T PF07470_consen 192 AIYGLAEVLEYLP--EDHPERDELLEIAKKLADALARYQDEDGLWYQDLDDPDPGNYRETS--ATAMFAYGLLRGIRLG- 266 (336)
T ss_dssp HHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTSTTTSBEBSBTTTTTTTS-BEHH--HHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHhc--chhhhHHHHHHHHHHHHHHHHhcCCCCCCcceecCCCCCCCcccHH--HHHHHHHHHHHHHHcC-
Confidence 5555544433322 1344456677777777766666654 44543 55443 111111 11122111 223455
Q ss_pred CCCCCHHHHHHHHHHHHHhccc
Q 038924 734 LPIADEAKVKKALTKIYDFNVL 755 (920)
Q Consensus 734 ~~i~~~e~~~saL~~v~~~nv~ 755 (920)
.++++..+.+.++.++.++.
T Consensus 267 --~~d~~~y~~~a~~a~~~l~~ 286 (336)
T PF07470_consen 267 --LLDPEEYRPAAEKALEALLS 286 (336)
T ss_dssp --SSTHHHHHHHHHHHHHHHHH
T ss_pred --CCccHHHHHHHHHHHHHHHh
Confidence 46666555555555554443
No 43
>COG1554 ATH1 Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]
Probab=88.42 E-value=7.5 Score=48.28 Aligned_cols=83 Identities=18% Similarity=0.303 Sum_probs=51.4
Q ss_pred ccchHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHH-HH--hhCCCCCCCccCCCC--CCCccCCcCccchhhHHHHHH
Q 038924 588 DLNSKFVLQVYRDFVATGDKNFARAV-WPSVYIAMAY-ME--QFDKDGDGMIENEGF--PDQTYDAWSANGVSAYCGGLW 661 (920)
Q Consensus 588 D~n~~fil~v~ry~~~TGD~~fL~~~-~p~v~~al~~-l~--~~d~d~dGL~e~~G~--~d~t~D~w~~~G~say~~~l~ 661 (920)
-.|.-..+++|.|+..|||.+||+++ ++.+..+..| +. +++. .+|..+-.|. || -|. ...-.++|+|.+.
T Consensus 434 Hin~dIAyAv~~Y~q~TgD~~yl~~~G~evl~etArFW~srv~~~~-~~~~y~I~gV~GPd-EY~--~~InNN~fTN~ma 509 (772)
T COG1554 434 HINADIAYAVWNYWQVTGDDSYLADCGLEVLLETARFWASRVHFSD-RNGRYEIHGVTGPD-EYH--NHVNNNAFTNLMA 509 (772)
T ss_pred ehhhHHHHHHHHHHhhcCcHHHHHhcCHHHHHHHHHHHHHHheecc-cCCeEEEecCcCch-hhh--ccccchHHHHHHH
Confidence 34555788999999999999999987 8888888885 43 2432 2344332221 11 121 1223567776665
Q ss_pred HHHHHHHHHHHHH
Q 038924 662 VAALQAASALAND 674 (920)
Q Consensus 662 ~aAL~a~a~lA~~ 674 (920)
---|+-+.++++.
T Consensus 510 ~w~L~~ale~~~~ 522 (772)
T COG1554 510 AWNLEYALEILEW 522 (772)
T ss_pred HHHHHHHHHHHHH
Confidence 5556666666553
No 44
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]
Probab=85.22 E-value=12 Score=42.00 Aligned_cols=20 Identities=35% Similarity=0.579 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhCCHHHHHH
Q 038924 593 FVLQVYRDFVATGDKNFARA 612 (920)
Q Consensus 593 fil~v~ry~~~TGD~~fL~~ 612 (920)
|...|++.|++|||.++|+.
T Consensus 41 ~lyGv~~~~eAT~d~~yl~~ 60 (357)
T COG4225 41 FLYGVARAYEATGDAEYLDY 60 (357)
T ss_pred hHHHHHHHHHHcCcHHHHHH
Confidence 78899999999999987753
No 45
>PF07971 Glyco_hydro_92: Glycosyl hydrolase family 92; InterPro: IPR012939 This domain occurs within alpha-1,2-mannosidases, which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis. They are critical for the maturation of N-linked oligosaccharides and ER-associated degradation [].; PDB: 2WW2_C 2WVY_B 2WVZ_B 2WW0_H 2WZS_D 2WVX_B 2WW1_D 2WW3_C.
Probab=79.04 E-value=1.6e+02 Score=35.63 Aligned_cols=169 Identities=14% Similarity=0.070 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhhccCC------------ee-eEcCCCC--CCcc---------cccc
Q 038924 664 ALQAASALANDVGDHASASYFWVRYQKAKAVYDSLWNGS------------YF-NYDNSDG--SSST---------SIQA 719 (920)
Q Consensus 664 AL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~lWng~------------yy-~~D~~~~--~~~~---------~i~~ 719 (920)
.=-|.+.||+.||+++.+++|.++++.-+ .+||.+ |. .||.... .... +-++
T Consensus 243 ~D~~iA~~A~~LG~~~~~~~~~~Rs~ny~----n~fd~~tgf~~pr~~dG~w~~~fdp~~~~~~~~~f~EgnawqY~w~v 318 (502)
T PF07971_consen 243 DDWAIAQMAKALGKKEDADKFLKRSQNYR----NVFDPETGFFRPRNADGSWIEPFDPFYGCHWGDGFYEGNAWQYSWFV 318 (502)
T ss_dssp HHHHHHHHHHHTT-HHHHHHHHCCGGGGG----GGEETTTTCE--B-TTS-B-SS--TT---B-STTSSSS-HHHHTT--
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHH----HHcCCccCCccccCCCCCCCCCCCccccccCCCceEecCcceeEecC
Confidence 34467899999999987777666554433 356543 32 1443200 0000 0011
Q ss_pred ccchhhHHHHHhCCCCCCCHHHHHHHHHHHHHhccccccCCccccccccCCCCcccCCCCccCCCcchHHHHHHHHHHHc
Q 038924 720 DQLAGQWYARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNGMQPDGRIDMSGLQAREIWPGVTYGLAASMIQE 799 (920)
Q Consensus 720 dql~Gq~~a~~~GL~~i~~~e~~~saL~~v~~~nv~~~~~g~~G~~~g~~p~G~~~~~~~~s~~vW~g~~y~lAa~mi~~ 799 (920)
.|=. +-+..+.| -+++..+.|+..+................|.+. +.+|+=.++.|. +-..
T Consensus 319 phD~-~gLi~lmG-----G~~~f~~rLd~~F~~~~~~~~~~~~~g~~g~y~---------~gNEPs~h~pyl----yn~~ 379 (502)
T PF07971_consen 319 PHDV-AGLIELMG-----GKEAFVARLDAFFTEPNPFSYGPYGTGNIGQYA---------HGNEPSHHIPYL----YNYA 379 (502)
T ss_dssp TT-H-HHHHHHCT-----SHHHHHHHHHHHCHS---TCGCCCCHCCCTTS----------TTSGGGTTGGGG----GGGC
T ss_pred ccCH-HHHHHHhC-----CHHHHHHHHHHHhCCCcccCccccccccccccc---------CCCCccccchhH----HHhC
Confidence 1100 11223344 567888888888875432110000000111111 222322222222 1245
Q ss_pred CCHHHHHHHHHHHHHHhhhcCCCCCCCCCCcCccCCCCCCccccchhhHHHHHHHHHcCCCCc-ccCCeeEE
Q 038924 800 EMVDMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNNDEYRSLCYMRPLTIWAMQWALTKPKLS-RQEIKHEI 870 (920)
Q Consensus 800 G~~eeA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~w~~~~Al~g~~~~-~~~~~l~~ 870 (920)
|...++-+.++.+.+..|.. +|..+.++ --...||+|-+.-|| |+-+- +-.....|
T Consensus 380 g~P~kTq~~vr~i~~~~y~~--------~p~G~pGn------dD~G~MSaWyV~sal-G~YPv~pg~~~y~i 436 (502)
T PF07971_consen 380 GQPWKTQEWVRRILDELYSN--------TPDGLPGN------DDCGQMSAWYVFSAL-GFYPVNPGSPEYVI 436 (502)
T ss_dssp T-HHHHHHHHHHHHHHSB-S--------STT-CSST------TTTTCCHHHHHHHHH-TEE-SSTTSSEEEE
T ss_pred CChHHHHHHHHHHHHHHhCC--------ccCCCCCC------cccchHHHHHHHHHc-CCCCCCCCCceEEE
Confidence 88888999999999887552 45545554 234579999987655 55444 33333333
No 46
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=78.68 E-value=10 Score=43.65 Aligned_cols=102 Identities=18% Similarity=0.227 Sum_probs=59.6
Q ss_pred ccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh---hCCCCCCCccCCCCCCCccCCc-CccchhhHHHHHHHH
Q 038924 588 DLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ---FDKDGDGMIENEGFPDQTYDAW-SANGVSAYCGGLWVA 663 (920)
Q Consensus 588 D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~---~d~d~dGL~e~~G~~d~t~D~w-~~~G~say~~~l~~a 663 (920)
-.|..++....|.|+.|||..+| ...+++.+|+.. .|+ .+|++. +|....+ |+- .....-+|.++.++.
T Consensus 155 ~sN~~~~~laarL~~~t~~~~Yl----~~A~~~~~W~~~~~L~d~-~~g~v~-Dg~~~~~-~c~~~~~~~~TYNqG~~l~ 227 (370)
T PF03663_consen 155 ISNGPAAQLAARLYRITGDQTYL----DWAKKIYDWMRDSGLIDP-STGLVY-DGINIDG-NCTNINKTKWTYNQGVFLG 227 (370)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHH----HHHHHHHHHHHH-HHB---TTS-B---EE-TTS-SS-B-TT---HHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhcCChHHH----HHHHHHHHHhhcceeEEC-CCcEEE-eCCccCC-CCCcCCCceechHHHHHHH
Confidence 46777899999999999998654 457788899854 343 468886 3432111 111 224567889988765
Q ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCC
Q 038924 664 ALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNGS 702 (920)
Q Consensus 664 AL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~ 702 (920)
| +++|.+.-+++ +.|.+.++++.++..+ +++..
T Consensus 228 a---~~~Ly~~T~~~---~~yl~~A~~la~~~~~~~~~~~ 261 (370)
T PF03663_consen 228 A---AAYLYNATNDE---QTYLDRAEKLADAAINHFFDNG 261 (370)
T ss_dssp H---HHHHHHHH--H----HHHHHHHHHHHHHHHHHEETT
T ss_pred H---HHHHHHhcCCc---cHHHHHHHHHHHHHHHHhCCCC
Confidence 5 55556665443 2799999999888766 77543
No 47
>PF06204 CBM_X: Putative carbohydrate binding domain ; InterPro: IPR009342 This domain is conserved in enzymes that have carbohydrates as substrate, and may be a carbohydrate-binding domain.; PDB: 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A 3ACS_A 1V7V_A 1V7X_A ....
Probab=76.47 E-value=5.2 Score=34.47 Aligned_cols=48 Identities=25% Similarity=0.283 Sum_probs=33.1
Q ss_pred eecCCCCeEEEEEeCCCCccc---cccCCC-cEEEEEcCCCceeeEEeCCCCC
Q 038924 100 GRSYRGEFQRFKLFHGICDDA---PVLANQ-FSVFVSRPNGEKFSSVLCPRSP 148 (920)
Q Consensus 100 ~~~~~G~f~~w~l~~g~~~~~---~v~an~-F~~~v~~~~g~~~~~vL~~~~~ 148 (920)
+++.+|+.+...++..+.+|. ++++|. |++.|+.. |.+|+|..+.+..
T Consensus 5 ~F~~~~~eyv~r~~~~~~tp~P~~n~LsNg~y~~mvt~~-G~GySw~~~~~~~ 56 (66)
T PF06204_consen 5 GFDEDGREYVIRLITTPDTPAPWVNVLSNGSYGVMVTNS-GSGYSWAKNSRDN 56 (66)
T ss_dssp EEETTTTEEE---ES-S--SS--EEEE-SSSEEEEEETT-SBEEEEES-TTTS
T ss_pred ccCCCCceeeccccCCCCCCCCEEEEeeCCcEEEEEcCC-CceeecccccCcC
Confidence 578899999999999887775 689998 99999886 6779998877653
No 48
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=75.06 E-value=31 Score=39.03 Aligned_cols=91 Identities=12% Similarity=0.172 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh--hCCCCCCCccCCCCCCCccCCcCc-cchhhHHHHHHHHHHHHHH
Q 038924 593 FVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ--FDKDGDGMIENEGFPDQTYDAWSA-NGVSAYCGGLWVAALQAAS 669 (920)
Q Consensus 593 fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~--~d~d~dGL~e~~G~~d~t~D~w~~-~G~say~~~l~~aAL~a~a 669 (920)
.|++..+-+. .|+.++++ .++++++|+.+ +|.+..|+... .-++-++ .-.+.|-.++.+ .+++
T Consensus 26 ~~~~fa~a~~-~g~~~~l~----~A~~~~~fl~~~~~D~~~Gg~~~~------~~~~~~~~~~~~~Y~~af~l---~ala 91 (346)
T PF07221_consen 26 QLYTFARAYR-LGRPEYLE----LAEHGFDFLRKHFRDPEYGGWYRS------LDDGGPLDPQKDLYDQAFAL---LALA 91 (346)
T ss_dssp HHHHHHHHHH-TTSHHHHH----HHHHHHHHHHHTTBTTTTSSBSSE------EETTEEEE--EEHHHHHHHH---HHHH
T ss_pred HHHHHHHHHh-cCchhHHH----HHHHHHHHHHHhcccCCCCCEEEE------eCCCCCCccccchHHHHHHH---HHHH
Confidence 3444445556 78888654 48889999975 45543344321 0011011 235677776554 4445
Q ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCC
Q 038924 670 ALANDVGDHASASYFWVRYQKAKAVYDS-LWNGS 702 (920)
Q Consensus 670 ~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~ 702 (920)
+ +...|+++ +.+.|+++.+.+++ +|+++
T Consensus 92 ~-~~~tg~~~----~~~~A~~~~~~l~~~~~d~~ 120 (346)
T PF07221_consen 92 E-ARATGDPE----ALELAEQTLEFLERRFWDPE 120 (346)
T ss_dssp H-HHCTT-TT----HHHHHHHHHHHHHHHTEETT
T ss_pred H-HHHhCChh----HHHHHHHHHHHHHHHhcccc
Confidence 5 57778774 56788899999999 99864
No 49
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism]
Probab=65.99 E-value=2.5e+02 Score=32.56 Aligned_cols=213 Identities=15% Similarity=0.167 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh--hCCCCCCCccCCCCCCCccCCcCccchhhHHHHHHHHHHHHHHH
Q 038924 593 FVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ--FDKDGDGMIENEGFPDQTYDAWSANGVSAYCGGLWVAALQAASA 670 (920)
Q Consensus 593 fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~--~d~d~dGL~e~~G~~d~t~D~w~~~G~say~~~l~~aAL~a~a~ 670 (920)
|++..+..+..+|+....+ .+..+++.+.+ ++. +++|.- -..++|.-...|-|+-. -.+.+|..
T Consensus 120 FallA~A~~a~a~~~~a~~----~~~~a~~~l~~~~~~~-~~pl~~----~e~~~~~~~pl~sNp~M-----Hl~EA~LA 185 (388)
T COG2942 120 FALLAAAHAATAGPPRADE----LLDEALDVLERRFWRE-EHPLGG----FEEDNPGSAPLGSNPHM-----HLLEAMLA 185 (388)
T ss_pred HHHHHHHHHHhcCChhHHH----HHHHHHHHHHHHHhhh-cCCccc----ccccCCCCCccCCCcch-----HHHHHHHH
Confidence 8999998888888876443 23455555533 333 345542 11234432223444332 22344444
Q ss_pred HHHHcCCchHHHHHHHHHHHHHHHHhh-hccCCeee----EcCCCC----CCccccccccchhhHHHHHhCCCCCCCHHH
Q 038924 671 LANDVGDHASASYFWVRYQKAKAVYDS-LWNGSYFN----YDNSDG----SSSTSIQADQLAGQWYARACGLLPIADEAK 741 (920)
Q Consensus 671 lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~yy~----~D~~~~----~~~~~i~~dql~Gq~~a~~~GL~~i~~~e~ 741 (920)
-.+..|+ ..|...++++.+.+-. |-+++-+. ||..-. .....+.|.+-+ .|.-.+.-+......+.
T Consensus 186 ~~e~~~~----~~~~~~A~~ia~l~~~rf~d~~~g~v~E~fd~dW~p~~~frg~~~ePGH~f-EW~~Lll~~a~~~~~~~ 260 (388)
T COG2942 186 AYEATGE----KTWLDRADRIADLIISRFADAESGLVREHFDHDWNPAHGFRGRGIEPGHQF-EWAWLLLDIARRRGRAW 260 (388)
T ss_pred HHhccCc----hhHHHHHHHHHHHHHHHhhhcccCcHhhhccccCCcCCCcccCCCCCchHH-HHHHHHHHHHHHhchhH
Confidence 4555665 4678888888777776 77653222 343221 123346665544 34333333222222233
Q ss_pred HHHHHHHHHHhccccccCC-ccccccccCCCCcccCCCCccCCCcchHHHHHHHHHHHcCC--HHHHHHHHHHHHHHhhh
Q 038924 742 VKKALTKIYDFNVLKVKGG-MCGAMNGMQPDGRIDMSGLQAREIWPGVTYGLAASMIQEEM--VDMAFQTAAGVYEVAWS 818 (920)
Q Consensus 742 ~~saL~~v~~~nv~~~~~g-~~G~~~g~~p~G~~~~~~~~s~~vW~g~~y~lAa~mi~~G~--~eeA~~~~~~i~~~~~~ 818 (920)
.....++++..-+..--+. ..|++..+.++|.+.... .-.|+..++.=|+..+..+- .+.=++....+.+..|.
T Consensus 261 l~~~A~~lf~~a~~~g~d~~~gg~~~sl~~D~~~~d~~---~r~WpQ~E~l~AA~ala~~~~~~~~y~~~~~R~~~~~~~ 337 (388)
T COG2942 261 LIEAARRLFDIAVADGWDPERGGAYYSLDDDGSPHDRQ---QRLWPQTEALKAAVALAETTGARERYWQWYARAWDYLWW 337 (388)
T ss_pred HHHHHHHHHHHHHHhccCcccCeEEEEecCCCCcCCHH---HhhChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 3333333443322211111 224556677787655331 24699888766666655432 33334444444443333
Q ss_pred ---cCCCCCCCC
Q 038924 819 ---EDGLGYSFQ 827 (920)
Q Consensus 819 ---~~g~G~~~~ 827 (920)
...+|++|+
T Consensus 338 hl~d~~~G~W~~ 349 (388)
T COG2942 338 HLDDPEYGLWFD 349 (388)
T ss_pred hcCCCcCCcchh
Confidence 234666654
No 50
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=61.26 E-value=34 Score=38.75 Aligned_cols=195 Identities=18% Similarity=0.254 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh--hCCCCCCCccCCCCCCCccC-CcCc-cchhhHHHHHHHHHHHHH
Q 038924 593 FVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ--FDKDGDGMIENEGFPDQTYD-AWSA-NGVSAYCGGLWVAALQAA 668 (920)
Q Consensus 593 fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~--~d~d~dGL~e~~G~~d~t~D-~w~~-~G~say~~~l~~aAL~a~ 668 (920)
|++.....+..|||.+.+ ..++++++.+.+ +|++ .|+... .+| .|.. .+.+++. -.+.++
T Consensus 85 f~l~ala~~~~tg~~~~~----~~A~~~~~~l~~~~~d~~-~g~~~~------~~~~~~~~~r~~n~~m-----hl~eA~ 148 (346)
T PF07221_consen 85 FALLALAEARATGDPEAL----ELAEQTLEFLERRFWDPE-GGGYRE------SFDPDWSPPRGQNPHM-----HLLEAF 148 (346)
T ss_dssp HHHHHHHHHHCTT-TTHH----HHHHHHHHHHHHHTEETT-TTEE--------EETTTSSCBEEHHHHH-----HHHHHH
T ss_pred HHHHHHHHHHHhCChhHH----HHHHHHHHHHHHHhcccc-cCccee------ccCCccccCCCCChhH-----HHHHHH
Confidence 444443338899998654 446677788754 4543 344331 111 1222 3445442 334455
Q ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCC-eee---EcCCCCC----------Cccccccccchhh-HHH-HH-
Q 038924 669 SALANDVGDHASASYFWVRYQKAKAVYDS-LWNGS-YFN---YDNSDGS----------SSTSIQADQLAGQ-WYA-RA- 730 (920)
Q Consensus 669 a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~-yy~---~D~~~~~----------~~~~i~~dql~Gq-~~a-~~- 730 (920)
..+++..|+. +|.+.++++.+.+.. +++.+ .+. ||..-.. ....|.+.+.+-- |+. .+
T Consensus 149 l~l~~~~~~~----~~~~~a~~l~~~~~~~f~~~~~g~~~E~f~~dw~~~~~~~~~d~~~~~~~~pGH~~E~~wll~~~~ 224 (346)
T PF07221_consen 149 LALYEATGDP----RYLDRAEELLDLFLDRFADPESGALPEFFDRDWNPLPDGSGDDTFRGRIVEPGHDFEWAWLLLEAA 224 (346)
T ss_dssp HHHHHHHHHH----HHHHHHHHHHHHHHTTCHHCCTTEETSEEETTSEBETTTTTTHSTTTSSB-HHHHHHHHHHHHHHH
T ss_pred HHHHHhccCH----HHHHHHHHHHHHHHHHHHHhccCeeeeeeccccccccccccccccccCccCCchhHHHHHHHHHHH
Confidence 5666666643 488888888888886 88643 111 3332110 0112444444311 221 11
Q ss_pred --hCCCCCCCHH---HHHHHHHHHHHhccccccCCccccccccCCCCcccCCCCccCCCcchHHHHHHHHHHHcC-CHHH
Q 038924 731 --CGLLPIADEA---KVKKALTKIYDFNVLKVKGGMCGAMNGMQPDGRIDMSGLQAREIWPGVTYGLAASMIQEE-MVDM 804 (920)
Q Consensus 731 --~GL~~i~~~e---~~~saL~~v~~~nv~~~~~g~~G~~~g~~p~G~~~~~~~~s~~vW~g~~y~lAa~mi~~G-~~ee 804 (920)
.+. -+++ .+++.++...+.-+.+. + .|+...+..+|.+.. .+.--|+..+...|..+..+- ..++
T Consensus 225 ~~~~~---~~~~~~~~a~~l~~~~~~~G~d~~--~-gG~~~~~d~~g~~~~---~~k~wW~q~Eal~a~~~~~~~tg~~~ 295 (346)
T PF07221_consen 225 RLTGR---GDPDWLERARRLFDFALEHGWDRE--G-GGLFYSVDRDGKPPD---RSKRWWPQAEALKALLAAYELTGDEK 295 (346)
T ss_dssp HHCHC---T-HTHHHHHHHHHHHHHHHHBSTT--T-SSB-SEEETTS-BSS---T-EEHHHHHHHHHHHHHHHHHH--HH
T ss_pred Hhccc---ccHHHHHHHHHHHHHHHHheEecC--C-CeEEEEEeCCCCccc---cCccccHHHHHHHHHHHHHhccCcHH
Confidence 232 2322 22333333333333221 1 145555555665432 223469988877666554431 2344
Q ss_pred HHHHHHHHHHHh
Q 038924 805 AFQTAAGVYEVA 816 (920)
Q Consensus 805 A~~~~~~i~~~~ 816 (920)
.++.++.+.+-+
T Consensus 296 ~~~~~~~~~~~~ 307 (346)
T PF07221_consen 296 YLDWARRVWDYI 307 (346)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555444
No 51
>COG4833 Predicted glycosyl hydrolase [Carbohydrate transport and metabolism]
Probab=58.76 E-value=21 Score=38.78 Aligned_cols=102 Identities=18% Similarity=0.191 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhCCCCCCCccCCCCC---CCccCCcCccchhhHHHHHHHHHHHHH
Q 038924 592 KFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQFDKDGDGMIENEGFP---DQTYDAWSANGVSAYCGGLWVAALQAA 668 (920)
Q Consensus 592 ~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~~d~d~dGL~e~~G~~---d~t~D~w~~~G~say~~~l~~aAL~a~ 668 (920)
.|++..++++..- .+.....-+..+|+...-.|+|||++ +|.. |-|.| +.-...||++.++. |.+.
T Consensus 152 Pa~I~~ar~~~~~------~krL~~AMK~~dWi~~~Lid~DGlV~-DGi~~ledGt~l---vr~~~tYcQGV~IG-le~~ 220 (377)
T COG4833 152 PAGIFLARYPDQY------GKRLKRAMKMADWIDRTLIDPDGLVF-DGIKALEDGTSL---VRAQYTYCQGVVIG-LETE 220 (377)
T ss_pred cceEEEeechHHH------HHHHHHHHHHHHHHHhhccCCCcchh-hhhhhhccCchh---heeeccccceeEee-chhh
Confidence 3667777765322 11122223344677654456799998 3432 22221 24466789988877 6655
Q ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCCeeeEc
Q 038924 669 SALANDVGDHASASYFWVRYQKAKAVYDS-LWNGSYFNYD 707 (920)
Q Consensus 669 a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~yy~~D 707 (920)
.++-+ |+.+.| +|-..+.+..++.++ +-+-.-+..+
T Consensus 221 L~Lr~--~~a~~A-~Y~a~~h~~vaav~~~mT~~Gv~~~e 257 (377)
T COG4833 221 LALRT--GPAARA-RYCARVHRLVAAVNEHMTPLGVLRGE 257 (377)
T ss_pred hhhhc--CchHHH-HHHHHHHHHHHHHHHhcCccceeecC
Confidence 55433 666555 477777788777777 7654444443
No 52
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=56.40 E-value=18 Score=44.22 Aligned_cols=92 Identities=8% Similarity=-0.119 Sum_probs=62.8
Q ss_pred EEEEEeCCCCccccccCCCcEEEEEcCCCceeeEEeCCCCCCCCCcCCCCCCcccccccCCCCcceEEeccceEEEEeec
Q 038924 108 QRFKLFHGICDDAPVLANQFSVFVSRPNGEKFSSVLCPRSPGVPKKNTDSGIESWDWNLKGENCTYHALFPRAWTVYDGE 187 (920)
Q Consensus 108 ~~w~l~~g~~~~~~v~an~F~~~v~~~~g~~~~~vL~~~~~~~~~~~~~~~l~~w~w~~~~~~~~Y~~lyP~a~t~y~~~ 187 (920)
|.|+...++......++.+++.+...-...-....|+ |+.+ .+.+|+|+|..-+..++..+|+++.+|. .
T Consensus 147 c~~~~~~gl~sWd~ni~~~~~~Y~~L~PRsWt~y~~~---~~~l------~v~~rqvsp~ip~~y~dsslP~a~fv~~-v 216 (879)
T KOG2119|consen 147 CGQRPATGLSSWDWNIPGEKSTYHGLFPRSWTEYDGE---PDGL------TVVCRQVSPVIPHNYRDSSLPVAVFVFT-V 216 (879)
T ss_pred cccCCCCCccccccccCCcceeEeeecCceeEEeecc---cccc------EEEEeecccccccccccccCcceEEEEE-c
Confidence 7777777776666667777777654432221222222 2222 4577889998888889999999999998 4
Q ss_pred CCCCeEEEEEEEcccccCCCCCCC
Q 038924 188 PDPELRIVCRQISPFIPHNYKESS 211 (920)
Q Consensus 188 ~~~~i~v~~~~~SP~IP~d~kdSS 211 (920)
+ ++-.++..+|++.+.....++
T Consensus 217 ~--N~~~~e~~vsl~ft~~n~~g~ 238 (879)
T KOG2119|consen 217 E--NTGKEEAEVSLLFTFRNGTGN 238 (879)
T ss_pred c--ccccceEEEEEEEEEecCCCc
Confidence 4 678889999999886654433
No 53
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=55.94 E-value=1.6e+02 Score=36.49 Aligned_cols=105 Identities=14% Similarity=0.223 Sum_probs=64.6
Q ss_pred cCcccccccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hCCCCCCCccCCCCCCCccCCcCccchhhHHHH
Q 038924 581 FNSSRWKDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ-FDKDGDGMIENEGFPDQTYDAWSANGVSAYCGG 659 (920)
Q Consensus 581 ~D~~~W~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~-~d~d~dGL~e~~G~~d~t~D~w~~~G~say~~~ 659 (920)
.|+..-.|-|.+.|-++..-.+.+||..+++ ..+++.+++.. .-. |.|.. -.++ |..++.+.
T Consensus 404 ~Ddkvlt~wNglmi~aLa~a~~~~~d~~~l~----~A~~~~~fi~~~l~~--~rl~~------~~~~-----G~a~~~g~ 466 (667)
T COG1331 404 RDDKVLTDWNGLMIAALAEAGRVLGDPEYLE----AAERAADFILDNLYV--DRLLR------RYRG-----GEAAVAGL 466 (667)
T ss_pred CCcceeeccHHHHHHHHHHHHHHcCChHHHH----HHHHHHHHHHHhhcc--cchhe------eeec-----Cccccccc
Confidence 4555556788889999999999999998774 57888898753 222 23332 1222 22222211
Q ss_pred H--HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hccCC--eeeE
Q 038924 660 L--WVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS-LWNGS--YFNY 706 (920)
Q Consensus 660 l--~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWng~--yy~~ 706 (920)
+ +-.-..++.+|.+..++. +|-+.|.++.+.+.+ ||+++ ||..
T Consensus 467 leDYA~~i~gll~lye~t~d~----~yL~~A~~L~~~~i~~f~d~~gGf~~t 514 (667)
T COG1331 467 LEDYAFLILGLLALYEATGDL----AYLEKAIELADEAIADFWDDEGGFYDT 514 (667)
T ss_pred chhHHHHHHHHHHHHHhhCcH----HHHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 1 112233445566666655 477888888777777 99854 6653
No 54
>PF09137 Glucodextran_N: Glucodextranase, domain N; InterPro: IPR015220 Glucodextranase domain N, uniquely found in bacterial and archaeal glucoamylases and glucodextranases, adopts a structure consisting of 17 antiparallel beta-strands. These beta-strands are divided into two beta-sheets, and one of the beta-sheets is wrapped by an extended polypeptide, which appears to stabilise the domain. This domain, together with glycoside hydrolase domain A (IPR011613 from INTERPRO), is mainly involved with catalytic activity, hydrolysing alpha-1,6-glucosidic linkages of dextran to release beta-D-glucose from the non-reducing end via an inverting reaction mechanism []. ; PDB: 1UG9_A 1ULV_A 1LF6_B 1LF9_A.
Probab=44.02 E-value=4.9e+02 Score=28.85 Aligned_cols=137 Identities=18% Similarity=0.247 Sum_probs=65.8
Q ss_pred cCCCCeEEEEEEEcccccCCCCCCCCCEEEEEEEEEeCCC--CeEEEEEEEEeccccCCCCCCCCcccccceecccCcee
Q 038924 187 EPDPELRIVCRQISPFIPHNYKESSFPASVFTFTLSNSGQ--TSADVTLLFTWANSVAGDSGLSGHHFNSKTMTKDGVHG 264 (920)
Q Consensus 187 ~~~~~i~v~~~~~SP~IP~d~kdSSlPv~vf~~~v~N~~~--~~~~vsl~~~~~n~~G~~~~~~~~~~n~~~~~~~~~~G 264 (920)
+++..-+|+.+.|+- | + .++-+.+++++...+ ++.++-++. .--+++... =|........-..
T Consensus 92 d~~gry~i~k~i~tD--P-~-----rd~ll~~v~f~al~g~~~~~~ly~l~--~Phl~n~G~-----~n~a~~~~~~g~~ 156 (269)
T PF09137_consen 92 DKQGRYRITKEIFTD--P-D-----RDVLLMRVTFEALDGSVGDYRLYALL--APHLNNTGA-----GNSAWVVDAAGRP 156 (269)
T ss_dssp ETTSSEEEEEEEEE---T-T-----SSEEEEEEEEEESSS-GGG-EEEEEE--EE-CCCBST-----TEEEEEECECCEE
T ss_pred cCCCCEEEEEEEECC--C-C-----CCEEEEEEEEecCCCCccceEEEEEE--cccccCCCC-----CcEEEEecCCCce
Confidence 466778888887553 2 2 489999999999887 455555444 333332111 1211111111123
Q ss_pred EEEeeccCCCCCCceEEEEEecCCCeEEEeeCccccCCCCCccchHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeeEEEE
Q 038924 265 LTLHHRTANGRPPVTFAVAAEETADVHVSECPCFLLSGNSKGITAKDMWNEIKKHGSFDHLDNDKTSPSEPGSSIGAAIA 344 (920)
Q Consensus 265 v~l~~~~~~~~~~~~~aiaa~~~~~v~vt~~~~f~~~~~~~~~~~~~~W~~f~~~G~l~~~~~~~~~~s~~g~~~~aAva 344 (920)
++++++ .+..+|+.+.. +=...|+ -|. -..+-|++|.+||+|... + . ..--+-|+
T Consensus 157 ~L~A~~-----~~~~lAL~as~-~f~~~S~--Gyv--------G~SDG~~dL~~~g~l~w~-y-----~---~A~~GNVa 211 (269)
T PF09137_consen 157 ALVAWK-----GPVALALAASP-PFTRASV--GYV--------GVSDGWQDLKRDGRLDWQ-Y-----D---SAGDGNVA 211 (269)
T ss_dssp EEEECC-----TTEEEEEEETT---SCEEE--EET--------TTSSHHHHHHHHSS-----------S---EEEEESEE
T ss_pred EEEEec-----CCcEEEEecCC-CceeEEE--EEe--------ecCccHHHHhhcCccccc-c-----c---cCCCCcEE
Confidence 455542 23334444422 2111111 122 235679999999999753 1 0 11113344
Q ss_pred EEeEecC--CCEEEEEEEEee
Q 038924 345 ASLTIPS--GSTRSVTFSLAW 363 (920)
Q Consensus 345 ~~~~l~p--ge~~tv~F~LaW 363 (920)
..-.|+. +...+++++|+.
T Consensus 212 l~gel~~~~~~~~~f~laLgF 232 (269)
T PF09137_consen 212 LTGELPLGASGNTEFTLALGF 232 (269)
T ss_dssp EEEEE-T-STTECEEEEEEEE
T ss_pred EEEEecCCCCCCceEEEEEEc
Confidence 4445554 556677888875
No 55
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=43.26 E-value=67 Score=37.02 Aligned_cols=106 Identities=20% Similarity=0.308 Sum_probs=60.7
Q ss_pred cCcccccccchHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHH-HhhCCCC--CCCccCCCCCCCccCCcCccc
Q 038924 581 FNSSRWKDLNSKFVLQVYRDFVATGDK-----NFARAVWPSVYIAMAYM-EQFDKDG--DGMIENEGFPDQTYDAWSANG 652 (920)
Q Consensus 581 ~D~~~W~D~n~~fil~v~ry~~~TGD~-----~fL~~~~p~v~~al~~l-~~~d~d~--dGL~e~~G~~d~t~D~w~~~G 652 (920)
-|+..| +.+++-+-|+.|||. .+|+ ..+++.+++ ..||.+. -||.-... +.+. ....
T Consensus 87 ~DD~aw------~~la~l~aye~t~~~~~~~~~yL~----~A~~i~~~~~~~wd~~~cgGGi~W~~~----~~~~-~~~~ 151 (370)
T PF03663_consen 87 YDDNAW------WALALLRAYELTGDQPSDNPKYLD----LAKEIFDFLISGWDDTSCGGGIWWSID----DTNS-GYDY 151 (370)
T ss_dssp HHHHHH------HHHHHHHHHHHH--H-----HHHH----HHHHHHHHHHHTB-SGG-GS-BEEET--------T-EEEE
T ss_pred cChHHH------HHHHHHHHHHhhCCCcchHHHHHH----HHHHHHHHHHHhcCCccCCCCcccccc----ccCC-CCCc
Confidence 466677 899999999999999 7765 466667776 4588752 23432100 0000 1123
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh--hccCC-eeeEcC
Q 038924 653 VSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKAKAVYDS--LWNGS-YFNYDN 708 (920)
Q Consensus 653 ~say~~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~--lWng~-yy~~D~ 708 (920)
.++-.+++ ++..+++|++..|++ .|.+.|+++-+++.+ |.|++ +..+|.
T Consensus 152 Kna~sN~~---~~~laarL~~~t~~~----~Yl~~A~~~~~W~~~~~L~d~~~g~v~Dg 203 (370)
T PF03663_consen 152 KNAISNGP---AAQLAARLYRITGDQ----TYLDWAKKIYDWMRDSGLIDPSTGLVYDG 203 (370)
T ss_dssp EEHHHHHH---HHHHHHHHHHHH--H----HHHHHHHHHHHHHHH-HHB--TTS-B--E
T ss_pred ccccchHH---HHHHHHHHHHhcCCh----HHHHHHHHHHHHhhcceeEECCCcEEEeC
Confidence 55555553 346677788887665 488999999999877 88765 444554
No 56
>COG3537 Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]
Probab=41.34 E-value=3.1e+02 Score=33.86 Aligned_cols=53 Identities=11% Similarity=0.051 Sum_probs=36.3
Q ss_pred HHHHcCCHHHHHHHHHHHHHHhhhcCCCCCCCCCCcCccCCCCCCccccchhhHHHHHHHHHcCCCCc
Q 038924 795 SMIQEEMVDMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNNDEYRSLCYMRPLTIWAMQWALTKPKLS 862 (920)
Q Consensus 795 ~mi~~G~~eeA~~~~~~i~~~~~~~~g~G~~~~~PE~~~~~~~~r~~~Y~r~~a~w~~~~Al~g~~~~ 862 (920)
.+...|..++.-++++.+....|.. +|+.+-++ --..+||+|-+..|| |+-+.
T Consensus 616 Ly~yiG~pd~T~~~v~~l~~k~f~~--------s~~gyPGn------eD~GaMSsWyVwsAL-GlYP~ 668 (768)
T COG3537 616 LYNYIGQPDKTQRLVRRLRRKHFHP--------SPDGYPGN------EDAGAMSSWYVWSAL-GLYPV 668 (768)
T ss_pred HHHhcCCchhHHHHHHHHHHHhcCC--------CCCCCCCC------cccchHHHHHHHHhc-ccccC
Confidence 4567899999999999998655332 55555444 234589999987665 55554
No 57
>PF07721 TPR_4: Tetratricopeptide repeat; InterPro: IPR011717 This entry includes tetratricopeptide-like repeats not detected by the IPR001440 from INTERPRO, IPR013105 from INTERPRO and IPR011716 from INTERPRO models. The tetratricopeptide repeat (TPR) motif is a protein-protein interaction module found in multiple copies in a number of functionally different proteins that facilitates specific interactions with a partner protein(s) [].; GO: 0042802 identical protein binding
Probab=38.96 E-value=52 Score=22.48 Aligned_cols=23 Identities=17% Similarity=0.124 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHH
Q 038924 788 VTYGLAASMIQEEMVDMAFQTAA 810 (920)
Q Consensus 788 ~~y~lAa~mi~~G~~eeA~~~~~ 810 (920)
..+.+|..+...|+.++|.++++
T Consensus 3 a~~~la~~~~~~G~~~eA~~~l~ 25 (26)
T PF07721_consen 3 ARLALARALLAQGDPDEAERLLR 25 (26)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHh
Confidence 56788999999999999999875
No 58
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=29.49 E-value=4.2e+02 Score=33.02 Aligned_cols=97 Identities=20% Similarity=0.305 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh---hCCCCCCCccCCCCCCCccCCcCc--cchhhHHHHHHHHHHHH
Q 038924 593 FVLQVYRDFVATGDKNFARAVWPSVYIAMAYMEQ---FDKDGDGMIENEGFPDQTYDAWSA--NGVSAYCGGLWVAALQA 667 (920)
Q Consensus 593 fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~~---~d~d~dGL~e~~G~~d~t~D~w~~--~G~say~~~l~~aAL~a 667 (920)
.++.+.||+..|||..-++ .+.+.|+-|.. +|.=+-|+-.+ .|-+.|.+ .-.-.|-|++.+ ++
T Consensus 214 ~l~~Llr~~~~~~d~~~~~----~~~~TL~~ma~GGIyDhlgGGF~RY-----StD~~WlvPHFEKMLyDnA~l~---~~ 281 (667)
T COG1331 214 LLLFLLRYSLRTGDERALD----MVLRTLDAMARGGIYDHLGGGFFRY-----STDREWLVPHFEKMLYDNALLL---RA 281 (667)
T ss_pred HHHHHHHHHHhhCCHHHHH----HHHHHHHHHHccCCccccCCceeee-----ecCCceechhHHHHHHHHHHHH---HH
Confidence 6788889999999955443 34555555533 23222233322 13345654 347788888765 55
Q ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hcc--CCeee
Q 038924 668 ASALANDVGDHASASYFWVRYQKAKAVYDS-LWN--GSYFN 705 (920)
Q Consensus 668 ~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lWn--g~yy~ 705 (920)
++++....|++. |+..++.....+.+ +|. |.||.
T Consensus 282 y~~ay~~tgd~~----y~~~a~~i~~~l~rel~sp~ggFys 318 (667)
T COG1331 282 YAEAYRATGDDL----YRRAAEGILDYLLRELYSPEGGFYS 318 (667)
T ss_pred HHHHHHHhCCHH----HHHHHHHHHHHHHHHhcCCCCceee
Confidence 666777788874 88889999999999 886 34666
No 59
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
Probab=28.41 E-value=5.2e+02 Score=28.44 Aligned_cols=96 Identities=15% Similarity=0.069 Sum_probs=53.8
Q ss_pred ccccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hhCCCCCCCccCCCCCCCccCCcCccchhhHHHHHHHHH
Q 038924 586 WKDLNSKFVLQVYRDFVATGDKNFARAVWPSVYIAMAYME-QFDKDGDGMIENEGFPDQTYDAWSANGVSAYCGGLWVAA 664 (920)
Q Consensus 586 W~D~n~~fil~v~ry~~~TGD~~fL~~~~p~v~~al~~l~-~~d~d~dGL~e~~G~~d~t~D~w~~~G~say~~~l~~aA 664 (920)
|.++....++++.+.++.|||..+++ .++++++++. .+..+.+|.....+ .+...-.| -+|.+..
T Consensus 137 ~~hG~aGi~~~L~~l~~~t~d~~~l~----~A~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~w-chG~aGi-------- 202 (321)
T cd04791 137 LLHGWAGIALFLLRLYKATGDSRYLE----LAEEALDKELARAVVDDGGLLQVDE-GARLLPYL-CSGSAGL-------- 202 (321)
T ss_pred cccCcHHHHHHHHHHHHHHCCHHHHH----HHHHHHHHHHHhhccCCCCceEcCC-CCccCccc-CCCcHHH--------
Confidence 35677778999999999999999875 4566667654 34443344432110 00000011 1232222
Q ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhh-hc
Q 038924 665 LQAASALANDVGDHASASYFWVRYQKAKAVYDS-LW 699 (920)
Q Consensus 665 L~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~-lW 699 (920)
+.+...+.+.++++ +|.+.++++.+.+.+ .|
T Consensus 203 ~~~l~~l~~~~~d~----~~~~~a~~~~~~~~~~~~ 234 (321)
T cd04791 203 GLLMLRLEAITGDK----RWRDEADGIAHAALSSCY 234 (321)
T ss_pred HHHHHHHHHhcCCH----HHHHHHHHHHHHHhhhhc
Confidence 22334566667765 466677777766666 54
No 60
>PF11349 DUF3151: Protein of unknown function (DUF3151); InterPro: IPR014487 This group represents an uncharacterised conserved protein.
Probab=27.68 E-value=82 Score=30.51 Aligned_cols=44 Identities=16% Similarity=0.290 Sum_probs=31.3
Q ss_pred cCccchhhHH---HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038924 648 WSANGVSAYC---GGLWVAALQAASALANDVGDHASASYFWVRYQKA 691 (920)
Q Consensus 648 w~~~G~say~---~~l~~aAL~a~a~lA~~lGd~~~a~~~~~~a~~~ 691 (920)
|...|+..|. |==++-||-+.+.-|+.+|++++.++|.+.+...
T Consensus 75 WkG~GPVPw~HePNrGfLRal~aLa~AA~~IGE~dE~~Rc~~~L~Ds 121 (129)
T PF11349_consen 75 WKGHGPVPWSHEPNRGFLRALAALARAAQAIGETDEYDRCRQFLRDS 121 (129)
T ss_pred CCCCCCCCCccCCccHHHHHHHHHHHHHHHhCChhHHHHHHHHHHhC
Confidence 4445555552 1113578888889999999999999998877654
No 61
>KOG2429 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism]
Probab=26.92 E-value=2e+02 Score=34.76 Aligned_cols=138 Identities=23% Similarity=0.340 Sum_probs=72.1
Q ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhhccCCeeeEcCCCCCCccccccccchhhHHHHHhCCCC----------
Q 038924 666 QAASALANDVGDHASASYFWVRYQKAKAVYDSLWNGSYFNYDNSDGSSSTSIQADQLAGQWYARACGLLP---------- 735 (920)
Q Consensus 666 ~a~a~lA~~lGd~~~a~~~~~~a~~~k~~~~~lWng~yy~~D~~~~~~~~~i~~dql~Gq~~a~~~GL~~---------- 735 (920)
--+.-|.+..||+. |++.| +.++.++|+-+-= .|- ..+.| |-.-|+|.+..+|++-
T Consensus 203 lEFg~LSrLTGD~~----fE~vA---~~A~~~lW~~RS~-igL----lGn~i--dV~tG~W~~~~sGIGAgiDSfyEYll 268 (622)
T KOG2429|consen 203 LEFGTLSRLTGDPK----FEKVA---RRALDALWSLRSG-IGL----LGNHI--DVQTGEWTAPDSGIGAGIDSFYEYLL 268 (622)
T ss_pred eehhhhHHhhCCcH----HHHHH---HHHHHHHHhhcCC-CCc----cccee--eccccceeccccccccchHHHHHHHH
Confidence 34566788899984 44444 4455668863210 110 01111 1233555555555541
Q ss_pred ----CC-CHH---HHHHHHHHHHHhccccccCCccccccccCCCCcccCCCCccC-CCcchHHHHHHHHHHHcCCHHHHH
Q 038924 736 ----IA-DEA---KVKKALTKIYDFNVLKVKGGMCGAMNGMQPDGRIDMSGLQAR-EIWPGVTYGLAASMIQEEMVDMAF 806 (920)
Q Consensus 736 ----i~-~~e---~~~saL~~v~~~nv~~~~~g~~G~~~g~~p~G~~~~~~~~s~-~vW~g~~y~lAa~mi~~G~~eeA~ 806 (920)
++ +++ .-..+.+++.++.-. + .=++|-.--+|.+..+-.+|= +-|||+. ...|++|.|.
T Consensus 269 K~yILfgd~e~lemf~ea~~ai~~y~r~----~-~wY~~V~m~~G~v~~p~~dSLqAfwpGlq-------vLaGDvd~A~ 336 (622)
T KOG2429|consen 269 KGYILFGDPELLEMFNEAYEAIQKYTRK----G-PWYVNVNMDSGSVSLPWFDSLQAFWPGLQ-------VLAGDVDDAI 336 (622)
T ss_pred HHheecCCHHHHHHHHHHHHHHHHHhhc----C-CeEEEEecCCCceehHHHhhHHhhccchh-------hhhcchHHHH
Confidence 11 222 224444444443211 1 112333334565544322332 5677653 3479999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCcCccCC
Q 038924 807 QTAAGVYEVAWSEDGLGYSFQTPESWNNN 835 (920)
Q Consensus 807 ~~~~~i~~~~~~~~g~G~~~~~PE~~~~~ 835 (920)
++..- |-.+|.+ +| .+||.||-.
T Consensus 337 ~~h~~-y~~vwkk--yG---~lPEryN~~ 359 (622)
T KOG2429|consen 337 RTHLM-YFSVWKK--YG---FLPERYNLA 359 (622)
T ss_pred HHHHH-HHHHHHH--cC---CCccccccc
Confidence 98776 5577898 67 499999874
No 62
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=25.21 E-value=1.4e+02 Score=22.72 Aligned_cols=29 Identities=14% Similarity=-0.035 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 038924 788 VTYGLAASMIQEEMVDMAFQTAAGVYEVA 816 (920)
Q Consensus 788 ~~y~lAa~mi~~G~~eeA~~~~~~i~~~~ 816 (920)
.-+.+|..+...|+.++|.++++.+....
T Consensus 3 ~~~~la~~~~~~G~~~~A~~~~~~~l~~~ 31 (44)
T PF13428_consen 3 AWLALARAYRRLGQPDEAERLLRRALALD 31 (44)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 44678899999999999999999877543
No 63
>PF06045 Rhamnogal_lyase: Rhamnogalacturonate lyase family; InterPro: IPR010325 Rhamnogalacturonate lyase degrades the rhamnogalacturonan I (RG-I) backbone of pectin []. This family contains mainly members from plants, but also contains the plant pathogen Erwinia chrysanthemi.
Probab=24.07 E-value=2.7e+02 Score=29.44 Aligned_cols=64 Identities=22% Similarity=0.419 Sum_probs=29.8
Q ss_pred cccCCC-cEEEEEcCCCceeeEEeCCCCCCCCC-cCCCCCCcccc--cccCCCCcceEEeccceEEEEe
Q 038924 121 PVLANQ-FSVFVSRPNGEKFSSVLCPRSPGVPK-KNTDSGIESWD--WNLKGENCTYHALFPRAWTVYD 185 (920)
Q Consensus 121 ~v~an~-F~~~v~~~~g~~~~~vL~~~~~~~~~-~~~~~~l~~w~--w~~~~~~~~Y~~lyP~a~t~y~ 185 (920)
.++.|+ ..+.+++++|.. +.+.-.+..-.+. ......-+-|+ |+..|....|..+.|....+..
T Consensus 18 VvldNGiVqVtls~p~G~V-tgIkYnGi~NLle~~n~e~nrGYwD~~W~~~G~~~~~~~~~gt~f~Vi~ 85 (203)
T PF06045_consen 18 VVLDNGIVQVTLSKPGGIV-TGIKYNGIDNLLEVANKENNRGYWDLVWNEPGSKGKFDRIKGTEFSVIE 85 (203)
T ss_pred EEEECCEEEEEEcCCCceE-EEEEECCEehhhcccCcccCCceEEEecccCCccccccccCCcEEEEEE
Confidence 456666 667777765532 2322111111111 01122335676 7777765544444444444444
No 64
>PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A.
Probab=23.58 E-value=1e+02 Score=21.21 Aligned_cols=27 Identities=19% Similarity=0.078 Sum_probs=22.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 038924 790 YGLAASMIQEEMVDMAFQTAAGVYEVA 816 (920)
Q Consensus 790 y~lAa~mi~~G~~eeA~~~~~~i~~~~ 816 (920)
|.+|..+...|+.++|.++++.+.+..
T Consensus 4 ~~~a~~~~~~g~~~~A~~~~~~~~~~~ 30 (33)
T PF13174_consen 4 YRLARCYYKLGDYDEAIEYFQRLIKRY 30 (33)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 667888888999999999999987654
No 65
>PF12854 PPR_1: PPR repeat
Probab=23.30 E-value=1e+02 Score=22.50 Aligned_cols=21 Identities=24% Similarity=0.199 Sum_probs=17.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHH
Q 038924 791 GLAASMIQEEMVDMAFQTAAG 811 (920)
Q Consensus 791 ~lAa~mi~~G~~eeA~~~~~~ 811 (920)
.+..++.+.|+.++|+++++.
T Consensus 12 ~lI~~~Ck~G~~~~A~~l~~~ 32 (34)
T PF12854_consen 12 TLIDGYCKAGRVDEAFELFDE 32 (34)
T ss_pred HHHHHHHHCCCHHHHHHHHHh
Confidence 345778899999999999875
No 66
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well.
Probab=23.25 E-value=3.1e+02 Score=34.26 Aligned_cols=39 Identities=23% Similarity=0.463 Sum_probs=35.4
Q ss_pred CCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcCC
Q 038924 782 REIWPGVTYGLAASMIQEEMVDMAFQTAAGVYEVAWSEDG 821 (920)
Q Consensus 782 ~~vW~g~~y~lAa~mi~~G~~eeA~~~~~~i~~~~~~~~g 821 (920)
+-||+.+.+.+|.+|...|+.++|.+.++.+.+.. ..+|
T Consensus 293 ryvW~RD~a~~a~AL~~~G~~~~a~~~~~~l~~~~-~~~G 331 (648)
T TIGR01535 293 HLVWPRDLYQVANAFLAAGDVDSALRSLDYLAKVQ-QDNG 331 (648)
T ss_pred EEEehhhHHHHHHHHHHCCCHHHHHHHHHHHHHHh-ccCC
Confidence 47999999999999999999999999999999988 5543
No 67
>PF14310 Fn3-like: Fibronectin type III-like domain; PDB: 3ABZ_D 3AC0_D 2X40_A 2X41_A 2X42_A.
Probab=22.85 E-value=85 Score=26.99 Aligned_cols=20 Identities=20% Similarity=0.492 Sum_probs=14.9
Q ss_pred EEEeEecCCCEEEEEEEEee
Q 038924 344 AASLTIPSGSTRSVTFSLAW 363 (920)
Q Consensus 344 a~~~~l~pge~~tv~F~LaW 363 (920)
-.++.|+|||+++++|.|.-
T Consensus 24 F~rv~l~pGes~~v~~~l~~ 43 (71)
T PF14310_consen 24 FERVSLAPGESKTVSFTLPP 43 (71)
T ss_dssp EEEEEE-TT-EEEEEEEEEH
T ss_pred eEEEEECCCCEEEEEEEECH
Confidence 45667999999999999873
No 68
>TIGR03504 FimV_Cterm FimV C-terminal domain. This protein is found at the extreme C-terminus of FimV from Pseudomonas aeruginosa, and of TspA of Neisseria meningitidis. Disruption of the former blocks twitching motility from type IV pili; Semmler, et al. suggest a role in peptidoglycan layer remodelling required by type IV fimbrial systems.
Probab=20.21 E-value=1.6e+02 Score=23.28 Aligned_cols=25 Identities=24% Similarity=0.157 Sum_probs=22.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Q 038924 790 YGLAASMIQEEMVDMAFQTAAGVYE 814 (920)
Q Consensus 790 y~lAa~mi~~G~~eeA~~~~~~i~~ 814 (920)
+-+|..++..|+.+.|.++++.+..
T Consensus 3 LdLA~ayie~Gd~e~Ar~lL~evl~ 27 (44)
T TIGR03504 3 LDLARAYIEMGDLEGARELLEEVIE 27 (44)
T ss_pred hHHHHHHHHcCChHHHHHHHHHHHH
Confidence 5689999999999999999999874
Done!