BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038933
(347 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W034|RNP1_ARATH Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana
GN=RNP1 PE=1 SV=1
Length = 411
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 128/186 (68%), Gaps = 7/186 (3%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
KLFVGG+S ET+E+ LRE+F+ YG V + +++R +LTG RGFGFVIF+ S+ + LQ
Sbjct: 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNC----VGDDDTEINTKKIFVGGLPLDIKE 123
KH + +EV+VK+A+ + + ++ +G +GN D TKKIFVGGLP + +
Sbjct: 67 KHSIDT-REVDVKRAMSR--EEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTD 123
Query: 124 EEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVK 183
EEF+ YFE +G VTD ++ D+ T RPRGFGF++FDSEDA ++VL FH L K VEVK
Sbjct: 124 EEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVK 183
Query: 184 RSHPKD 189
R+ PKD
Sbjct: 184 RALPKD 189
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+ +E R+YF YG V + I+ + T RGFGFV F + L
Sbjct: 110 KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH 169
Query: 67 HKHHVILGKEVEVKKAIPK 85
H + GK+VEVK+A+PK
Sbjct: 170 KTFHDLSGKQVEVKRALPK 188
>sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1
Length = 407
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 105/182 (57%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
KLFVGG+ T +ETLR YFSQYG V + +I++ + T RGFGFV F + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
+ H + G+ ++ K P+G + E + G G + KIFVGG+P + E E +
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 130
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YF+ FG VT+ +I D E RPRGFGFITF+ E + + + FH + K VEVKR+ P
Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
Query: 188 KD 189
+D
Sbjct: 191 RD 192
>sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2
Length = 406
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 105/182 (57%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
KLFVGG+ T +ETLR YFSQYG V + +I++ + T RGFGFV F + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
+ H + G+ ++ K P+G + E + G G + KIFVGG+P + E E +
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELR 130
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YF+ FG VT+ +I D E RPRGFGFITF+ E + + + FH + K VEVKR+ P
Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
Query: 188 KD 189
+D
Sbjct: 191 RD 192
>sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1
Length = 360
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 1/183 (0%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
KLFVGG+ T +ETLR YFSQYG V + +I++ + T RGFGFV F + L
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTE-INTKKIFVGGLPLDIKEEEF 126
+ H + G+ ++ K P+G + E S G + TE + KIFVGG+P + E E
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETEL 130
Query: 127 KSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSH 186
K YF FG VT+ +I D E RPRGFGFITF+ E + + + FH + K VEVKR+
Sbjct: 131 KEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 190
Query: 187 PKD 189
P+D
Sbjct: 191 PRD 193
>sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=HRP1 PE=1
SV=1
Length = 534
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 114/181 (62%), Gaps = 19/181 (10%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG++ +T E+ LREYF +YGTV + I++ TG RGFGF+ F K S ++ ++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK- 218
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
H++ GK ++ K+AIP+ D + T KIFVGG+ D++ +EF+
Sbjct: 219 TQHILDGKVIDPKRAIPR------------------DEQDKTGKIFVGGIGPDVRPKEFE 260
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
+F +GT+ DA ++ DK+TG+ RGFGF+T+DS DA + V Q +F K + +E+KR+ P
Sbjct: 261 EFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEP 320
Query: 188 K 188
+
Sbjct: 321 R 321
>sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1
SV=1
Length = 362
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 106/182 (58%), Gaps = 14/182 (7%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T +E LREYF Q+G V+E L++R LT RGFGFV F + + L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
H + K ++ K A P+ + + TKKIFVGGL ++ E+ K
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVT--------------RTKKIFVGGLSVNTTVEDVK 126
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YFE FG V DA ++ DK T R RGFGF+TF+SED V + FH++ KMVE K++ P
Sbjct: 127 QYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQP 186
Query: 188 KD 189
K+
Sbjct: 187 KE 188
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S T E +++YF Q+G V++ +++ + T RGFGFV F + E +
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 67 HKHHVILGKEVEVKKAIPK 85
H I K VE KKA PK
Sbjct: 169 IHFHEINNKMVECKKAQPK 187
>sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1
SV=1
Length = 362
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 106/182 (58%), Gaps = 14/182 (7%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T +E LREYF Q+G V+E L++R LT RGFGFV F + + L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
H + K ++ K A P+ + + TKKIFVGGL ++ E+ K
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVT--------------RTKKIFVGGLSVNTTVEDVK 126
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YFE FG V DA ++ DK T R RGFGF+TF+SED V + FH++ KMVE K++ P
Sbjct: 127 HYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQP 186
Query: 188 KD 189
K+
Sbjct: 187 KE 188
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S T E ++ YF Q+G V++ +++ + T RGFGFV F + E +
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 67 HKHHVILGKEVEVKKAIPK 85
H I K VE KKA PK
Sbjct: 169 IHFHEINNKMVECKKAQPK 187
>sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1
PE=2 SV=1
Length = 362
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 106/182 (58%), Gaps = 14/182 (7%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T +E LREYF Q+G V+E L++R LT RGFGFV F + + L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
H + K ++ K A P+ + + TKKIFVGGL ++ E+ K
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVT--------------RTKKIFVGGLSVNTTVEDVK 126
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YFE FG V DA ++ DK T R RGFGF+TF+SED V + FH++ KMVE K++ P
Sbjct: 127 HYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQP 186
Query: 188 KD 189
K+
Sbjct: 187 KE 188
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S T E ++ YF Q+G V++ +++ + T RGFGFV F + E +
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 67 HKHHVILGKEVEVKKAIPK 85
H I K VE KKA PK
Sbjct: 169 IHFHEINNKMVECKKAQPK 187
>sp|Q9VVE5|MSIR6_DROME RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster
GN=Rbp6 PE=2 SV=3
Length = 369
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 107/182 (58%), Gaps = 14/182 (7%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T+ E+LR+YF +YG + E ++++ T RGFGFV F+ + + L
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
H + GK+V+ K A P+ H TKKIFVGGL E+ K
Sbjct: 90 GTHELDGKKVDPKVAFPR-------RAHPKMVT-------RTKKIFVGGLSAPTTLEDVK 135
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
SYFE FG + DA ++ DK+T R RGFGF+TF SED + V + FH++ KMVE K++ P
Sbjct: 136 SYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQP 195
Query: 188 KD 189
K+
Sbjct: 196 KE 197
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S T E ++ YF Q+G +E+ +++ + T RGFGFV F + + +
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 67 HKHHVILGKEVEVKKAIPK 85
H I K VE KKA PK
Sbjct: 178 IHFHEINNKMVECKKAQPK 196
>sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC660.15 PE=4 SV=1
Length = 474
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 23/198 (11%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG++ ET +++LR+YF Q+G V + ++R TG RGFGF+ F + +
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK 223
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
+HH + GK ++ K+AIP+ + + T K+FVGG+P D EEEF+
Sbjct: 224 EHH-LDGKIIDPKRAIPR------------------EEQEKTAKMFVGGVPGDCTEEEFR 264
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
++F FG V DA ++ DK+TGRPRGFGF+T+++E A + + + K VEVKR+ P
Sbjct: 265 NFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATP 324
Query: 188 K----DRIDKFMNCYDCN 201
K D D+ + Y N
Sbjct: 325 KASLRDSHDRHQHGYHGN 342
>sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1
SV=1
Length = 346
Score = 141 bits (356), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 14/182 (7%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T+ ++LR+YFS++G + E +++R T RGFGFV F + + L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
HH + K ++ K A P+ + + TKKIFVGGL + E+ K
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPK--------------MVTRTKKIFVGGLSANTVVEDVK 127
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YFE FG V DA ++ DK T R RGFGF+TF++ED V + FH++ KMVE K++ P
Sbjct: 128 QYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 187
Query: 188 KD 189
K+
Sbjct: 188 KE 189
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 91 ESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFKSYFESFGTVTDAPVICDKETGRP 150
E+NG G +D++ + K+F+GGL + + YF FG + + V+ D T R
Sbjct: 2 EANGSPGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRS 61
Query: 151 RGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHPKDRIDKFM 195
RGFGF+TF + + VL H+L K ++ K + P+ K +
Sbjct: 62 RGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMV 106
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S T E +++YF Q+G VE+ +++ + T RGFGFV F + E +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 67 HKHHVILGKEVEVKKAIPK 85
H I K VE KKA PK
Sbjct: 170 IHFHEINNKMVECKKAQPK 188
>sp|P51989|RO21_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus
laevis PE=2 SV=1
Length = 346
Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 12/207 (5%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
E RKLF+GG+S ET EE+LR Y+ Q+GT+ + +++R + RGFGFV F+ ++
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H I G+ VE K+A+ + EES + KK+FVGG+ D
Sbjct: 64 DAAMATRPHTIDGRVVEPKRAVAR----EES--------AKPGAHVTVKKLFVGGIKEDT 111
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + +I DK++G+ RGF F+TFD D + ++ ++H + E
Sbjct: 112 EEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Query: 182 VKRSHPKDRIDKFMNCYDCNNSNFGFG 208
V+++ K + N + NFGFG
Sbjct: 172 VRKALSKQEMQDVQNTRNNRGGNFGFG 198
>sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1
SV=1
Length = 328
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 14/182 (7%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T+ ++LR+YFS++G + E +++R T RGFGFV F + + L
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
HH + K ++ K A P+ + + TKKIFVGGL + E+ K
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPK--------------MVTRTKKIFVGGLSANTVVEDVK 127
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YFE FG V DA ++ DK T R RGFGF+TF++ED V + FH++ KMVE K++ P
Sbjct: 128 QYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 187
Query: 188 KD 189
K+
Sbjct: 188 KE 189
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 91 ESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFKSYFESFGTVTDAPVICDKETGRP 150
E+NG G +D++ + K+F+GGL + + YF FG + + V+ D T R
Sbjct: 2 EANGSQGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRS 61
Query: 151 RGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHPK 188
RGFGF+TF + + VL H+L K ++ K + P+
Sbjct: 62 RGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR 99
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S T E +++YF Q+G VE+ +++ + T RGFGFV F + E +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 67 HKHHVILGKEVEVKKAIPK 85
H I K VE KKA PK
Sbjct: 170 IHFHEINNKMVECKKAQPK 188
>sp|Q02926|RB97D_DROME Ribonucleoprotein RB97D OS=Drosophila melanogaster GN=Rb97D PE=2
SV=1
Length = 471
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 108/180 (60%), Gaps = 12/180 (6%)
Query: 6 LRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDAL 65
LRKLF+GG++ T EE L+ ++ Q+G V + +++R T RGFGF+ +TK M + A
Sbjct: 31 LRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
Query: 66 QHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEE 125
+++ H+I GK VE K+A+P+ + ES +T I+ KK+FVGGL + EE
Sbjct: 91 ENRPHIIDGKTVEAKRALPRPER--ESR----------ETNISVKKLFVGGLKDNHDEEC 138
Query: 126 FKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRS 185
+ YF FG V ++ DK TG+ RGF F+ FD DA + + + H +KY V+VK+S
Sbjct: 139 LREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKS 198
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 4 VSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAED 63
+S++KLFVGG+ +EE LREYF Q+G V ++ + TG RGF FV F +
Sbjct: 120 ISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDK 179
Query: 64 ALQHKHHVILGKEVEVKKAI 83
A+ K H I V+VKK+I
Sbjct: 180 AILKKQHAIKYVHVDVKKSI 199
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 102 DDDTEI-NTKKIFVGGLPLDIKEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDS 160
DD E+ + +K+F+GGL EE K ++ +G V D V+ D T R RGFGFIT+
Sbjct: 23 DDICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTK 82
Query: 161 EDAANNVLQTRFHKLKYKMVEVKRSHPK 188
+ + R H + K VE KR+ P+
Sbjct: 83 SLMVDRAQENRPHIIDGKTVEAKRALPR 110
>sp|P51990|RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xenopus
laevis PE=2 SV=1
Length = 358
Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 115/207 (55%), Gaps = 12/207 (5%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
E RKLF+GG+S ET EE+LR ++ Q+G + + +++R + RGFGFV F+ ++
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H I G+ VE K+A+ + EES + KK+FVGG+ D
Sbjct: 64 DAAMSARPHTIDGRVVEPKRAVAR----EES--------AKPGAHVTVKKLFVGGIKEDT 111
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + +I DK++G+ RGFGF+TF+ D + ++ ++H + E
Sbjct: 112 EEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAE 171
Query: 182 VKRSHPKDRIDKFMNCYDCNNSNFGFG 208
V+++ K + N + NFGFG
Sbjct: 172 VRKALSKQEMQDVQNTRNNRGGNFGFG 198
>sp|P21522|ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
OS=Schistocerca americana GN=HNRNP PE=2 SV=1
Length = 342
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 113/187 (60%), Gaps = 12/187 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP +RKLF+GG+ T +E+L+++F Q+G + + ++++ T RGFGF+ +++ M
Sbjct: 12 EPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMV 71
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+DA + H + G+ VE K+A+P+ +G + KK+FVGG+ ++
Sbjct: 72 DDAQNARPHKVDGRVVEPKRAVPRTE------------IGRPEAGATVKKLFVGGIKEEM 119
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + + YF+ +GTV A ++ DKET + RGF F+ FD D + + +R H+++ K ++
Sbjct: 120 EENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQIRGKHID 179
Query: 182 VKRSHPK 188
VK++ PK
Sbjct: 180 VKKALPK 186
>sp|Q22037|ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 OS=Caenorhabditis
elegans GN=hrp-1 PE=1 SV=1
Length = 346
Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 116/194 (59%), Gaps = 14/194 (7%)
Query: 1 MEPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISM 60
+EP +LRK+FVGG++ T ++ +RE++SQ+G + + +++R T RGFGFV F+ +
Sbjct: 17 LEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTE 76
Query: 61 AEDALQHKHHVILGKEVEVKKAIPKGHK-LEESNGHSGNCVGDDDTEINTKKIFVGGLPL 119
+ A++ + H+I GK V+ K+A+P+ K ESN ++TK+++V G+
Sbjct: 77 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESN-------------VSTKRLYVSGVRE 123
Query: 120 DIKEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKM 179
D E+ YF +GTVT + +I DK T +PRGFGF+TFD D+ + + + H +
Sbjct: 124 DHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHR 183
Query: 180 VEVKRSHPKDRIDK 193
+V++ KD + K
Sbjct: 184 CDVRKGLSKDEMSK 197
>sp|P07909|ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila
melanogaster GN=Hrb98DE PE=2 SV=1
Length = 365
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 112/187 (59%), Gaps = 12/187 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP +RKLF+GG+ T +E L+ +F ++G + + ++++ T RGFGF+ ++ SM
Sbjct: 26 EPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMI 85
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
++A + + H I G+ VE K+A+P+ ++ N +G V KK+FVG L D
Sbjct: 86 DEAQKSRPHKIDGRVVEPKRAVPR-QDIDSPN--AGATV---------KKLFVGALKDDH 133
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
E+ + YF+ FG + D ++ DKETG+ RGF F+ FD D + V+ + H+L KMV+
Sbjct: 134 DEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 193
Query: 182 VKRSHPK 188
VK++ PK
Sbjct: 194 VKKALPK 200
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 110 KKIFVGGLPLDIKEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQ 169
+K+F+GGL +E K++FE +G + D V+ D T R RGFGFIT+ + +
Sbjct: 31 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 90
Query: 170 TRFHKLKYKMVEVKRSHPKDRID 192
+R HK+ ++VE KR+ P+ ID
Sbjct: 91 SRPHKIDGRVVEPKRAVPRQDID 113
>sp|Q2HJ60|ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Bos taurus
GN=HNRNPA2B1 PE=2 SV=1
Length = 341
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 113/204 (55%), Gaps = 12/204 (5%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
E RKLF+GG+S ET EE+LR Y+ Q+G + + +++R + RGFGFV F+ ++
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H I G+ VE K+A+ + EES G + KK+FVGG+ D
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAR----EES--------GKPGAHVTVKKLFVGGIKEDT 111
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + +I D+++G+ RGFGF+TFD D + ++ ++H + E
Sbjct: 112 EEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Query: 182 VKRSHPKDRIDKFMNCYDCNNSNF 205
V+++ + + + + NF
Sbjct: 172 VRKALSRQEMQEVQSSRSGRGGNF 195
>sp|O88569|ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus
GN=Hnrnpa2b1 PE=1 SV=2
Length = 353
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 113/204 (55%), Gaps = 12/204 (5%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
E RKLF+GG+S ET EE+LR Y+ Q+G + + +++R + RGFGFV F+ ++
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H I G+ VE K+A+ + EES G + KK+FVGG+ D
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAR----EES--------GKPGAHVTVKKLFVGGIKEDT 123
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + +I D+++G+ RGFGF+TFD D + ++ ++H + E
Sbjct: 124 EEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 183
Query: 182 VKRSHPKDRIDKFMNCYDCNNSNF 205
V+++ + + + + NF
Sbjct: 184 VRKALSRQEMQEVQSSRSGRGGNF 207
>sp|P22626|ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens
GN=HNRNPA2B1 PE=1 SV=2
Length = 353
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 113/204 (55%), Gaps = 12/204 (5%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
E RKLF+GG+S ET EE+LR Y+ Q+G + + +++R + RGFGFV F+ ++
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H I G+ VE K+A+ + EES G + KK+FVGG+ D
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAR----EES--------GKPGAHVTVKKLFVGGIKEDT 123
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + +I D+++G+ RGFGF+TFD D + ++ ++H + E
Sbjct: 124 EEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 183
Query: 182 VKRSHPKDRIDKFMNCYDCNNSNF 205
V+++ + + + + NF
Sbjct: 184 VRKALSRQEMQEVQSSRSGRGGNF 207
>sp|A7VJC2|ROA2_RAT Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus
GN=Hnrnpa2b1 PE=1 SV=1
Length = 353
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 112/204 (54%), Gaps = 12/204 (5%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
E RKLF+GG+S ET EE+LR Y+ Q+G + + +++R + RGFGFV F+ ++
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H I G+ VE K+A+ + EES G + KK+FVGG+ D
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAR----EES--------GKPGAHVTVKKLFVGGIKEDT 123
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + +I D+++G+ RGFGF+TFD D + + ++H + E
Sbjct: 124 EEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAE 183
Query: 182 VKRSHPKDRIDKFMNCYDCNNSNF 205
V+++ + + + + NF
Sbjct: 184 VRKALSRQEMQEVQSSRSGRGGNF 207
>sp|Q5RBU8|ROA2_PONAB Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Pongo abelii
GN=HNRNPA2B1 PE=2 SV=1
Length = 353
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 112/204 (54%), Gaps = 12/204 (5%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
E RKLF+GG+S ET EE+LR Y+ Q+G + + +++R + RGFGFV F+ ++
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H I G+ VE K+A+ + EES G + KK+FVGG+ D
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAR----EES--------GKPGAHVTVKKLFVGGIKEDT 123
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + +I D+++G+ RGFGF+TFD D + ++ + H + E
Sbjct: 124 EEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKHHTINGHNAE 183
Query: 182 VKRSHPKDRIDKFMNCYDCNNSNF 205
V+++ + + + + NF
Sbjct: 184 VRKALSRQEMQEVQSSRSGRGGNF 207
>sp|Q32P51|RA1L2_HUMAN Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sapiens
GN=HNRNPA1L2 PE=2 SV=2
Length = 320
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +E+LR +F Q+GT+ + +++R T RGFGFV + +
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ H + G+ VE K+A+ + E + G + KKIFVGG+ D
Sbjct: 69 DAAMNTTPHKVDGRVVEPKRAVSR-----EDSQRPG-------AHLTVKKIFVGGIKEDT 116
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + ++ D+ +G+ RGF F+TFD D+ + ++ ++H +K E
Sbjct: 117 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCE 176
Query: 182 VKRSHPKDRI 191
V+++ PK +
Sbjct: 177 VRKALPKQEM 186
>sp|Q9TTV2|ROA2_SAGOE Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Saguinus oedipus
GN=HNRNPA2B1 PE=1 SV=1
Length = 341
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 112/204 (54%), Gaps = 12/204 (5%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
E RKLF+GG+S +T EE+LR Y+ Q+G + + +++R + RGFGFV F+ ++
Sbjct: 4 EKEQFRKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H I G+ VE K+A+ + EES G + KK+FVGG+ D
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAR----EES--------GKPGAHVTVKKLFVGGIKEDT 111
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YF +G + +I D+++G+ RGFGF+TFD D + ++ ++H + E
Sbjct: 112 EEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Query: 182 VKRSHPKDRIDKFMNCYDCNNSNF 205
V+++ + + + + NF
Sbjct: 172 VRKALSRQEMQEVQSSRSGRGGNF 195
>sp|P48810|RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F OS=Drosophila
melanogaster GN=Hrb87F PE=2 SV=2
Length = 385
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 111/191 (58%), Gaps = 12/191 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+ T ++ L+ +F ++G + + ++++ T RGFGF+ +++ M
Sbjct: 19 EPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMI 78
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
++A + H I G+ VE K+A+P+ E + ++G V KK+FVGGL D
Sbjct: 79 DNAQNARPHKIDGRTVEPKRAVPR---QEIDSPNAGATV---------KKLFVGGLRDDH 126
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
EE + YF+ FG + ++ DK+TG+ RGF FI FD D + ++ + H +K K ++
Sbjct: 127 DEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLD 186
Query: 182 VKRSHPKDRID 192
VK++ K +D
Sbjct: 187 VKKAIAKQDMD 197
>sp|P51992|RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus
laevis PE=2 SV=1
Length = 385
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +++LRE+F Q+G + + +++R T RGFGFV ++ +
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ ++ + H + G+ VE K+A+ + E + G + KKIFVGG+ D
Sbjct: 82 DASMSARPHKVDGRVVEPKRAVSR-----EDSARPG-------AHLTVKKIFVGGIKEDT 129
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + V+ D+++G+ RGF F+TFD D + ++ ++H + E
Sbjct: 130 EEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNCE 189
Query: 182 VKRSHPKDRI 191
VK++ K +
Sbjct: 190 VKKALSKQEM 199
>sp|Q13151|ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens
GN=HNRNPA0 PE=1 SV=1
Length = 305
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 109/191 (57%), Gaps = 12/191 (6%)
Query: 1 MEPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISM 60
ME L KLF+GG++ +T+E LR +F +GT+ + +++ + T R FGFV ++ +
Sbjct: 1 MENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEE 60
Query: 61 AEDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLD 120
A+ A+ H + G VE+K+A+ + E + G KK+FVGGL D
Sbjct: 61 ADAAMAASPHAVDGNTVELKRAVSR-----EDSARPG-------AHAKVKKLFVGGLKGD 108
Query: 121 IKEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMV 180
+ E + +F FGTV A +I DK++G+ RGFGF+ F + DAA+ +FH ++ V
Sbjct: 109 VAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRV 168
Query: 181 EVKRSHPKDRI 191
EVK++ PK+ I
Sbjct: 169 EVKKAVPKEDI 179
>sp|A5A6H4|ROA1_PANTR Heterogeneous nuclear ribonucleoprotein A1 OS=Pan troglodytes
GN=HNRNPA1 PE=2 SV=1
Length = 320
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 108/190 (56%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +E+LR +F Q+GT+ + +++R T RGFGFV + +
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H + G+ VE K+A+ + E + G + KKIFVGG+ D
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSR-----EDSQRPG-------AHLTVKKIFVGGIKEDT 116
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + ++ D+ +G+ RGF F+TFD D+ + ++ ++H + E
Sbjct: 117 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Query: 182 VKRSHPKDRI 191
V+++ K +
Sbjct: 177 VRKALSKQEM 186
>sp|P49312|ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus
GN=Hnrnpa1 PE=1 SV=2
Length = 320
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 108/190 (56%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +E+LR +F Q+GT+ + +++R T RGFGFV + +
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H + G+ VE K+A+ + E + G + KKIFVGG+ D
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSR-----EDSQRPG-------AHLTVKKIFVGGIKEDT 116
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + ++ D+ +G+ RGF F+TFD D+ + ++ ++H + E
Sbjct: 117 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Query: 182 VKRSHPKDRI 191
V+++ K +
Sbjct: 177 VRKALSKQEM 186
>sp|P09867|ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 OS=Bos taurus GN=HNRNPA1
PE=1 SV=2
Length = 320
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 108/190 (56%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +E+LR +F Q+GT+ + +++R T RGFGFV + +
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H + G+ VE K+A+ + E + G + KKIFVGG+ D
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSR-----EDSQRPG-------AHLTVKKIFVGGIKEDT 116
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + ++ D+ +G+ RGF F+TFD D+ + ++ ++H + E
Sbjct: 117 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Query: 182 VKRSHPKDRI 191
V+++ K +
Sbjct: 177 VRKALSKQEM 186
>sp|Q9CX86|ROA0_MOUSE Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus
GN=Hnrnpa0 PE=1 SV=1
Length = 305
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 108/191 (56%), Gaps = 12/191 (6%)
Query: 1 MEPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISM 60
ME L KLF+GG++ +T+E LR +F +GT+ + +++ + T R FGFV ++ +
Sbjct: 1 MENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEE 60
Query: 61 AEDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLD 120
A+ A+ H + G VE+K+A+ + E + G KK+FVGGL D
Sbjct: 61 ADAAMAASPHAVDGNTVELKRAVSR-----EDSARPG-------AHAKVKKLFVGGLKGD 108
Query: 121 IKEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMV 180
+ E + +F FG V A +I DK++G+ RGFGF+ F S DAA+ +FH ++ V
Sbjct: 109 VAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRV 168
Query: 181 EVKRSHPKDRI 191
EVK++ PK+ I
Sbjct: 169 EVKKAVPKEDI 179
>sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens
GN=HNRNPA1 PE=1 SV=5
Length = 372
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 108/190 (56%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +E+LR +F Q+GT+ + +++R T RGFGFV + +
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H + G+ VE K+A+ + E + G + KKIFVGG+ D
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSR-----EDSQRPG-------AHLTVKKIFVGGIKEDT 116
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + ++ D+ +G+ RGF F+TFD D+ + ++ ++H + E
Sbjct: 117 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Query: 182 VKRSHPKDRI 191
V+++ K +
Sbjct: 177 VRKALSKQEM 186
>sp|P04256|ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus
GN=Hnrnpa1 PE=1 SV=3
Length = 320
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 106/184 (57%), Gaps = 12/184 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +E+LR +F Q+GT+ + +++R T RGFGFV + +
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H + G+ VE K+A+ + E + G + KKIFVGG+ D
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSR-----EDSQRPG-------AHLTVKKIFVGGIKEDT 116
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + ++ D+ +G+ RGF F+TFD D+ + ++ ++H + E
Sbjct: 117 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Query: 182 VKRS 185
V+++
Sbjct: 177 VRKA 180
>sp|P51968|RO31_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus
laevis PE=2 SV=1
Length = 373
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +++LRE+F Q+G + + +++R T RGFGFV ++ +
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ ++ + H + G+ VE K+A+ + E + G + KKIFVGG+ D
Sbjct: 82 DASMSARPHKVDGRVVEPKRAVSR-----EDSARPG-------AHLTVKKIFVGGIKEDT 129
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + Y ES+G + V+ D+++G+ RGF F+TFD D + ++ ++H + E
Sbjct: 130 EEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 189
Query: 182 VKRSHPKDRI 191
VK++ K +
Sbjct: 190 VKKALSKQEM 199
>sp|Q6URK4|ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus
GN=Hnrnpa3 PE=1 SV=1
Length = 379
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +++LRE+F ++GT+ + +++R T RGFGFV ++ +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H + G+ VE K+A+ + ++ + KKIFVGG+ D
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPG------------AHLTVKKIFVGGIKEDT 137
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + V+ D+++G+ RGF F+TFD D + ++ ++H + E
Sbjct: 138 EEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Query: 182 VKRSHPKDRI 191
VK++ K +
Sbjct: 198 VKKALSKQEM 207
>sp|Q8BG05|ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus
GN=Hnrnpa3 PE=1 SV=1
Length = 379
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +++LRE+F ++GT+ + +++R T RGFGFV ++ +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H + G+ VE K+A+ + ++ + KKIFVGG+ D
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPG------------AHLTVKKIFVGGIKEDT 137
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + V+ D+++G+ RGF F+TFD D + ++ ++H + E
Sbjct: 138 EEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Query: 182 VKRSHPKDRI 191
VK++ K +
Sbjct: 198 VKKALSKQEM 207
>sp|P51991|ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens
GN=HNRNPA3 PE=1 SV=2
Length = 378
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +++LRE+F ++GT+ + +++R T RGFGFV ++ +
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H + G+ VE K+A+ + ++ + KKIFVGG+ D
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPG------------AHLTVKKIFVGGIKEDT 137
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + V+ D+++G+ RGF F+TFD D + ++ ++H + E
Sbjct: 138 EEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Query: 182 VKRSHPKDRI 191
VK++ K +
Sbjct: 198 VKKALSKQEM 207
>sp|Q28521|ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 OS=Macaca mulatta
GN=HNRNPA1 PE=2 SV=3
Length = 320
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 108/190 (56%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +E+LR +F Q+GT+ + +++R T RGFGFV + +
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKV 68
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H + G+ VE K+A+ + E + G + KKIFVGG+ D
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSR-----EDSQRPG-------AHLTVKKIFVGGIKEDT 116
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E + YFE +G + ++ D+ +G+ RGF F+TFD ++ + ++ ++H + E
Sbjct: 117 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNCE 176
Query: 182 VKRSHPKDRI 191
V+++ K +
Sbjct: 177 VRKALSKQEM 186
>sp|P17130|ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog OS=Xenopus
laevis GN=hnrnpa1 PE=2 SV=1
Length = 365
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 2 EPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMA 61
EP LRKLF+GG+S ET +E+LRE+F Q+GT+ + +++R + RGFGFV +
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEV 68
Query: 62 EDALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDI 121
+ A+ + H + G+ VE K+A+ + E + G + KKIFVGG+ D
Sbjct: 69 DAAMTARPHKVDGRVVEPKRAVSR-----EDSSRPG-------AHLTVKKIFVGGIKEDT 116
Query: 122 KEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVE 181
+E+ + YFE +G + ++ D+ +G+ RGF F+TF+ D+ + ++ ++H + +
Sbjct: 117 EEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQ 176
Query: 182 VKRSHPKDRI 191
V+++ K +
Sbjct: 177 VRKALSKQEM 186
>sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila
melanogaster GN=Hrb27C PE=1 SV=2
Length = 421
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 114/211 (54%), Gaps = 20/211 (9%)
Query: 1 MEPVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISM 60
ME KLFVGG+S ET +E L YF ++G + + +++++ +G RGFGFV F +
Sbjct: 1 MEEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTN 60
Query: 61 AEDALQHKHHVILGKEVEVKKAIPKG-HKLEESNGHSGNCVGDDDTEINTKKIFVGGLPL 119
LQ+ H + G+ ++ K P+ K ++ G+ K+F+GGLP
Sbjct: 61 VNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGY---------------KVFLGGLPS 105
Query: 120 DIKEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKM 179
++ E + +++F +G VT+ ++ D+E + RGFGF++F+ E + +V R+ L K
Sbjct: 106 NVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQ 165
Query: 180 VEVKRSHPKDRIDKFMNCYDCNNSNFGFGFG 210
VE+K++ P+D + NNS G +G
Sbjct: 166 VEIKKAEPRDG----SGGQNSNNSTVGGAYG 192
>sp|Q08473|SQD_DROME RNA-binding protein squid OS=Drosophila melanogaster GN=sqd PE=1
SV=3
Length = 344
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 98/182 (53%), Gaps = 23/182 (12%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
RKLFVGG+S ET E+ LR++F +YG +E + TG RGF F++FT +
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 67 HKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEF 126
H+I K+V+ KKA + H KIFVGGL +I +EE
Sbjct: 116 ADEHIINSKKVDPKKAKAR---------HG--------------KIFVGGLTTEISDEEI 152
Query: 127 KSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSH 186
K+YF FG + + + DK+ + +GF FITFDSE ++L+T K+ K V+VKR+
Sbjct: 153 KTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRAT 212
Query: 187 PK 188
PK
Sbjct: 213 PK 214
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 92 SNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFKSYFESFGTVTDAPVICDKETGRPR 151
+NG S N + +K+FVGGL + E+E + +F +G + V D +TGR R
Sbjct: 38 TNGSSDNQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSR 97
Query: 152 GFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHPK 188
GF FI F + +A + V H + K V+ K++ +
Sbjct: 98 GFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKAR 134
>sp|Q3SWU3|HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus
GN=Hnrpdl PE=2 SV=1
Length = 322
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 18/187 (9%)
Query: 3 PVSLRKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAE 62
P S K+F+GG+S +T+++ L EY S++G V + I +TG RGFGFV+F + +
Sbjct: 47 PTSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 106
Query: 63 DALQHKHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIK 122
L+ K H + GK ++ K+A K K +E KK+FVGGL D
Sbjct: 107 KVLELKEHKLDGKLIDPKRA--KALKGKEP----------------PKKVFVGGLSPDTS 148
Query: 123 EEEFKSYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEV 182
EE+ K YF +FG + + + D +T RGF FIT+ E+ +L++R+H++ E+
Sbjct: 149 EEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEI 208
Query: 183 KRSHPKD 189
K + PK+
Sbjct: 209 KVAQPKE 215
>sp|Q5ZI72|HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-like OS=Gallus gallus
GN=HNRPDL PE=2 SV=1
Length = 301
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T+++ L EY S++G V + I +TG RGFGFV+F + E L+
Sbjct: 31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 90
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
K H + GK ++ K+A K K +E KK+FVGGL D EE+ K
Sbjct: 91 KEHKLDGKLIDPKRA--KALKGKEP----------------PKKVFVGGLSPDTSEEQIK 132
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YF +FG + + + D +T RGF FIT+ E+ +L++R+H++ E+K + P
Sbjct: 133 EYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQP 192
Query: 188 KD 189
K+
Sbjct: 193 KE 194
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S +T+EE ++EYF +G +E + T RGF F+ +T + L+
Sbjct: 115 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 174
Query: 67 HKHHVILGKEVEVKKAIPK 85
++H I + E+K A PK
Sbjct: 175 SRYHQIGSGKCEIKVAQPK 193
>sp|O14979|HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like OS=Homo sapiens
GN=HNRPDL PE=1 SV=3
Length = 420
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T+++ L EY S++G V + I +TG RGFGFV+F + + L+
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
K H + GK ++ K+A K K +E KK+FVGGL D EE+ K
Sbjct: 209 KEHKLDGKLIDPKRA--KALKGKEP----------------PKKVFVGGLSPDTSEEQIK 250
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YF +FG + + + D +T RGF FIT+ E+ +L++R+H++ E+K + P
Sbjct: 251 EYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQP 310
Query: 188 KD 189
K+
Sbjct: 311 KE 312
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 97 GNCVGDDDTEINTKKIFVGGLPLDIKEEEFKSYFESFGTVTDAPVICDKETGRPRGFGFI 156
G+ + + + K+F+GGL D +++ Y FG V D + D TGR RGFGF+
Sbjct: 135 GSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
Query: 157 TFDSEDAANNVLQTRFHKLKYKMVEVKRS 185
F + + VL+ + HKL K+++ KR+
Sbjct: 195 LFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S +T+EE ++EYF +G +E + T RGF F+ +T + L+
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
Query: 67 HKHHVILGKEVEVKKAIPK 85
++H I + E+K A PK
Sbjct: 293 SRYHQIGSGKCEIKVAQPK 311
>sp|Q9Z130|HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like OS=Mus musculus
GN=Hnrpdl PE=1 SV=1
Length = 301
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T+++ L EY S++G V + I +TG RGFGFV+F + + L+
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
K H + GK ++ K+A K K +E KK+FVGGL D EE+ K
Sbjct: 90 KEHKLDGKLIDPKRA--KALKGKEP----------------PKKVFVGGLSPDTSEEQIK 131
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YF +FG + + + D +T RGF FIT+ E+ +L++R+H++ E+K + P
Sbjct: 132 EYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQP 191
Query: 188 KD 189
K+
Sbjct: 192 KE 193
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S +T+EE ++EYF +G +E + T RGF F+ +T + L+
Sbjct: 114 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 173
Query: 67 HKHHVILGKEVEVKKAIPK 85
++H I + E+K A PK
Sbjct: 174 SRYHQIGSGKCEIKVAQPK 192
>sp|Q640A2|HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like OS=Xenopus
tropicalis GN=hnrpdl PE=2 SV=1
Length = 297
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 99/182 (54%), Gaps = 18/182 (9%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T+++ L EY S++G V + I +TG RGFGFV+F + L+
Sbjct: 27 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET 86
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
K H + GK ++ K+A K K +E KK+FVGGL + EE+ K
Sbjct: 87 KEHKLDGKLIDPKRA--KALKGKEP----------------PKKVFVGGLSPETTEEQIK 128
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YF FG + + + D +T RGF F+T+ E+ +L++RFH++ E+K + P
Sbjct: 129 QYFGGFGEIENIELPMDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKVAQP 188
Query: 188 KD 189
K+
Sbjct: 189 KE 190
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%)
Query: 95 HSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFKSYFESFGTVTDAPVICDKETGRPRGFG 154
+ G+ + + + K+F+GGL D +++ Y FG V D + D TGR RGFG
Sbjct: 11 NEGSKINASKNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFG 70
Query: 155 FITFDSEDAANNVLQTRFHKLKYKMVEVKRS 185
F+ F + + VL+T+ HKL K+++ KR+
Sbjct: 71 FVLFKDAVSVDKVLETKEHKLDGKLIDPKRA 101
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S ET EE +++YF +G +E + T RGF FV +T + L+
Sbjct: 111 KKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTGEEPVKKLLE 170
Query: 67 HKHHVILGKEVEVKKAIPK 85
+ H I + E+K A PK
Sbjct: 171 SRFHQIGTGKCEIKVAQPK 189
>sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus
GN=Hnrnpab PE=1 SV=1
Length = 285
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 19/182 (10%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+FVGG+S +T+++ L++YF+++G V + I TG RGFGF++F S E L
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
K H + G+ ++ KKA+ + D KKIFVGGL + EE+ +
Sbjct: 136 KEHRLDGRVIDPKKAM---------------AMKKDPV----KKIFVGGLNPEATEEKIR 176
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YF FG + + D + + RGF FITF ED VL+ +FH + E+K + P
Sbjct: 177 EYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQP 236
Query: 188 KD 189
K+
Sbjct: 237 KE 238
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%)
Query: 92 SNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFKSYFESFGTVTDAPVICDKETGRPR 151
NG G+ + E + K+FVGGL D +++ K YF FG V D + D TGR R
Sbjct: 57 QNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSR 116
Query: 152 GFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRS 185
GFGFI F + VL + H+L ++++ K++
Sbjct: 117 GFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKA 150
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 1 MEPVSLRKLFVGGVSRETNEETLREYFSQYGTVEET-LIIRSRLTGHGRGFGFVIFTKIS 59
M+ ++K+FVGG++ E EE +REYF Q+G +E L I +L RGF F+ F +
Sbjct: 153 MKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKR-RGFVFITFKEED 211
Query: 60 MAEDALQHKHHVILGKEVEVKKAIPK 85
+ L+ K H + G + E+K A PK
Sbjct: 212 PVKKVLEKKFHTVSGSKCEIKVAQPK 237
>sp|Q7ZX83|HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A OS=Xenopus laevis
GN=hnrpdl-a PE=2 SV=1
Length = 293
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 18/182 (9%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T+++ L EY S++G V + I +TG RGFGFV+F + L+
Sbjct: 27 KMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET 86
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
H + GK ++ K+A K K +E KK+FVGGL + EE+ K
Sbjct: 87 NEHKLDGKLIDPKRA--KALKGKEP----------------PKKVFVGGLSPETTEEQIK 128
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YF FG + + + D +T RGF F+T+ E+ +L++RFH++ E+K + P
Sbjct: 129 QYFGGFGEIENIELPIDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKAAQP 188
Query: 188 KD 189
K+
Sbjct: 189 KE 190
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 95 HSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFKSYFESFGTVTDAPVICDKETGRPRGFG 154
+ G+ + + + K+F+GGL D +++ Y FG V D + D TGR RGFG
Sbjct: 11 NEGSKINASKNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFG 70
Query: 155 FITFDSEDAANNVLQTRFHKLKYKMVEVKRS 185
F+ F + + VL+T HKL K+++ KR+
Sbjct: 71 FVLFKDAVSVDKVLETNEHKLDGKLIDPKRA 101
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S ET EE +++YF +G +E + T RGF FV +T + L+
Sbjct: 111 KKVFVGGLSPETTEEQIKQYFGGFGEIENIELPIDTKTNERRGFCFVTYTGEEPVKKLLE 170
Query: 67 HKHHVILGKEVEVKKAIPK 85
+ H I + E+K A PK
Sbjct: 171 SRFHQIGTGKCEIKAAQPK 189
>sp|Q6NU14|HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-like-B OS=Xenopus laevis
GN=hnrpdl-b PE=2 SV=1
Length = 291
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 18/182 (9%)
Query: 8 KLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQH 67
K+F+GG+S +T+++ L EY S++G V + I +TG RGFGFV+F + L+
Sbjct: 35 KMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET 94
Query: 68 KHHVILGKEVEVKKAIPKGHKLEESNGHSGNCVGDDDTEINTKKIFVGGLPLDIKEEEFK 127
K H + GK ++ K+A K + +E KK+FVGGL + EE+ K
Sbjct: 95 KEHKLDGKLIDPKRA--KALQGKEP----------------PKKVFVGGLSPETTEEQIK 136
Query: 128 SYFESFGTVTDAPVICDKETGRPRGFGFITFDSEDAANNVLQTRFHKLKYKMVEVKRSHP 187
YF FG + + + D +T RGF F+T+ E+ +L++RFH++ E+K + P
Sbjct: 137 QYFGGFGEIENIELPMDTKTNERRGFCFVTYTDEEPVQKLLESRFHQIGTGKCEIKAAQP 196
Query: 188 KD 189
K+
Sbjct: 197 KE 198
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 7 RKLFVGGVSRETNEETLREYFSQYGTVEETLIIRSRLTGHGRGFGFVIFTKISMAEDALQ 66
+K+FVGG+S ET EE +++YF +G +E + T RGF FV +T + L+
Sbjct: 119 KKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTDEEPVQKLLE 178
Query: 67 HKHHVILGKEVEVKKAIPK 85
+ H I + E+K A PK
Sbjct: 179 SRFHQIGTGKCEIKAAQPK 197
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,985,717
Number of Sequences: 539616
Number of extensions: 6437815
Number of successful extensions: 17425
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 254
Number of HSP's that attempted gapping in prelim test: 14628
Number of HSP's gapped (non-prelim): 2189
length of query: 347
length of database: 191,569,459
effective HSP length: 118
effective length of query: 229
effective length of database: 127,894,771
effective search space: 29287902559
effective search space used: 29287902559
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)