BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038936
(476 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/476 (65%), Positives = 395/476 (82%)
Query: 1 AIDILCNQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPG 60
AID+LC Q+ L+EA+Q+L + P S Y +LIQ C Q RALEEGKKVH H+++SGF PG
Sbjct: 60 AIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPG 119
Query: 61 VFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQ 120
+ I N LL MYAKCG++ DA+ +FDEM RD+CS+N M++G+ + G LE+AR LFDEM +
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 121 RDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKE 180
+D++SWTAM++GYV+ +QP EAL LY +MQ NS N FT+S ++A +A++C+R GKE
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 181 IHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGR 240
IHG+I+R G DSDEV+WS+L DMYGKCG I+EAR IFDK+V++DVVSWT+MI RYF+ R
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 241 REEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASA 300
EGF+LFSEL+ S RPN +TFAGVLNACAD EELGKQVHGYMTR+G+DPYSFA+S+
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 301 LVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPD 360
LV MY+KCGN+E++K V +G P+PDLVSWTSLI G AQNG PD+AL+YF+LLLKSGT+PD
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 361 HIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVI 420
H+ FV VL+ACTHAGLV+KGL++F+SI EKH L++T+DHY C+VDLLARSGRF + + VI
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 421 SKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
S+MPMKP KFLWAS+LGGC +GN+DLA+ AA+ LF+IEPENP TYVTMANIYA+A
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAA 535
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/487 (39%), Positives = 287/487 (58%), Gaps = 36/487 (7%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P+ ++++ R +E GKKVHS + G + V +SN LL+MYAKCG+ A+ +
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
FD M RD+ S+N MI+ + G ++ A F++M +RD +W +MISG+ + + AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
D++ M ++FTL+SVLSA + ++ L +GK+IH +I+ TGFD +V +AL M
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 204 YGKCGSI---------------------------------NEARQIFDKMVDRDVVSWTA 230
Y +CG + N+A+ IF + DRDVV+WTA
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 231 MIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIG 290
MI Y Q G E LF ++ G RPN++T A +L+ + A+ GKQ+HG + G
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 291 YDPYSFAAS-ALVHMYSKCGNVENSKKVFNGMP-RPDLVSWTSLIAGYAQNGMPDKALEY 348
+ YS + S AL+ MY+K GN+ ++ + F+ + D VSWTS+I AQ+G ++ALE
Sbjct: 444 -EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 349 FELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLA 408
FE +L G +PDHI +VGV +ACTHAGLV++G QYF +K+ + T HYAC+VDL
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 409 RSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVT 468
R+G EA++ I KMP++PD W SLL CR+H N+DL K AAE L +EPEN Y
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 469 MANIYAS 475
+AN+Y++
Sbjct: 623 LANLYSA 629
Score = 219 bits (558), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/527 (26%), Positives = 251/527 (47%), Gaps = 81/527 (15%)
Query: 24 PSPSIYSSLIQFC--------RQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCG 75
P P S+L++ C ++ + VH + SG V++ N L+++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 76 NISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVR 135
A+ LFDEM R S+NT++S ++K G ++ FD++PQRD+ SWT MI GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 136 YNQPIEALDLYRMMQNF--ENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSD 193
Q +A+ R+M + E +FTL++VL++V+A +C+ GK++H +I++ G +
Sbjct: 124 IGQYHKAI---RVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 194 EVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFA------- 246
V ++L +MY KCG A+ +FD+MV RD+ SW AMI + Q G+ + A
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 247 ------------------------LFSELIK-SGIRPNAFTFAGVLNACADHAAEELGKQ 281
+FS++++ S + P+ FT A VL+ACA+ +GKQ
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 282 VHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKK------------------------- 316
+H ++ G+D +AL+ MYS+CG VE +++
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 317 --------VFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVL 368
+F + D+V+WT++I GY Q+G +A+ F ++ G +P+ +L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 369 TACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPD 428
+ + + G Q H K G Y+ ++ + A++G A + + D
Sbjct: 421 SVASSLASLSHGKQ-IHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD 479
Query: 429 KFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
W S++ HG+ + A E + +E P ++T ++++
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETML-MEGLRP-DHITYVGVFSA 524
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 156/373 (41%), Gaps = 81/373 (21%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P +S++ C L GK++HSH+ ++GF + N L+ MY++CG + A+ L
Sbjct: 277 PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 84 FDEMQERD--VCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIE 141
++ +D + + ++ G+ K G + QA+N+F + RD +WTAMI GY ++ E
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGE 396
Query: 142 ALDLYRMM---------------------------------------QNFENSVSNKF-- 160
A++L+R M + + SVSN
Sbjct: 397 AINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALIT 456
Query: 161 ------TLSSVLSAVSAIQCLR---------LGKEIHGY----------IMRTGFDSDEV 195
++S A I+C R + HG+ ++ G D +
Sbjct: 457 MYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Query: 196 VWSALSDMYGKCGSINEARQIFDKMVDRDVV-----SWTAMIGRYFQEGRREEGFALFSE 250
+ + G +N+ RQ FD M D D + + M+ + + G +E E
Sbjct: 517 TYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA----QE 572
Query: 251 LI-KSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPY-SFAASALVHMYSKC 308
I K I P+ T+ +L+AC H +LGK + + +P S A SAL ++YS C
Sbjct: 573 FIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLL--EPENSGAYSALANLYSAC 630
Query: 309 GNVENSKKVFNGM 321
G E + K+ M
Sbjct: 631 GKWEEAAKIRKSM 643
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 56/241 (23%)
Query: 45 GKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQ-ERDVCSYNTMISGFT 103
GK++H SG V +SN L+ MYAK GNI+ A FD ++ ERD S+ +MI
Sbjct: 432 GKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALA 491
Query: 104 KGGSLEQARNLFDEMPQR----DNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNK 159
+ G E+A LF+ M D+ ++ + S + + MM++ + +
Sbjct: 492 QHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIP-- 549
Query: 160 FTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVW---------------------- 197
TLS V L +E +I + + D V W
Sbjct: 550 -TLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAER 608
Query: 198 ------------SALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGF 245
SAL+++Y CG EA +I M D GR ++E+GF
Sbjct: 609 LLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD----------GRV----KKEQGF 654
Query: 246 A 246
+
Sbjct: 655 S 655
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 357 bits (915), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/480 (37%), Positives = 284/480 (59%), Gaps = 34/480 (7%)
Query: 28 IYSSLIQFCRQNRALEEGKKVHSHLKSSGFK-PGVFISNCLLDMYAKCGNISDAQTLFDE 86
+ +SL+Q C ++L++GK +H HLK +GFK P +SN L+ MY KCG DA +FD+
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQ 107
Query: 87 MQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLY 146
M R++ S+N M+SG+ K G L +AR +FD MP+RD SW M+ GY + EAL Y
Sbjct: 108 MHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 147 RMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGK 206
+ + N+F+ + +L+A + L+L ++ HG ++ GF S+ V+ ++ D Y K
Sbjct: 168 KEFRR-SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 207 CGSINEARQIFDKMVDRDV-------------------------------VSWTAMIGRY 235
CG + A++ FD+M +D+ VSWTA+I Y
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 236 FQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYS 295
++G LF ++I G++P FTF+ L A A A+ GK++HGYM R P +
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNA 346
Query: 296 FAASALVHMYSKCGNVENSKKVFNGMP-RPDLVSWTSLIAGYAQNGMPDKALEYFELLLK 354
S+L+ MYSK G++E S++VF + D V W ++I+ AQ+G+ KAL + ++K
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 355 SGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFH 414
QP+ V +L AC+H+GLV++GL++F S+ +HG+ +HYAC++DLL R+G F
Sbjct: 407 FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK 466
Query: 415 EAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYA 474
E I +MP +PDK +W ++LG CRIHGN +L K+AA+ L +++PE+ A Y+ +++IYA
Sbjct: 467 ELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYA 526
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 223 RDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQV 282
R + + + ++ + + + L + GIR A +L C D + + GK +
Sbjct: 9 RPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWI 68
Query: 283 HGYMTRIGYD-PYSFAASALVHMYSKCGN------------------------------- 310
H ++ G+ P + ++ L+ MY KCG
Sbjct: 69 HRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGM 128
Query: 311 VENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTA 370
+ ++ VF+ MP D+VSW +++ GYAQ+G +AL +++ +SG + + F G+LTA
Sbjct: 129 LVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTA 188
Query: 371 CTHAGLVDKGLQYFHSIKEKHGLTYTADHYA------CIVDLLARSGRFHEAEDVISKMP 424
C + + LQ ++ HG A + I+D A+ G+ A+ +M
Sbjct: 189 CVKS----RQLQLN---RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT 241
Query: 425 MKPDKFLWASLLGGCRIHGNLDLAKRAAEALF-EIEPENPATYVTMANIYA 474
+K D +W +L+ G G+++ AAE LF E+ +NP ++ + Y
Sbjct: 242 VK-DIHIWTTLISGYAKLGDME----AAEKLFCEMPEKNPVSWTALIAGYV 287
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 40/270 (14%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P +SS + +L GK++H ++ + +P + + L+DMY+K G++ ++ +
Sbjct: 309 PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERV 368
Query: 84 FDEMQERDVCSY-NTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYN-QPIE 141
F ++ C + NTMIS + G +A + D+M +++ QP
Sbjct: 369 FRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM---------------IKFRVQP-- 411
Query: 142 ALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLG-KEIHGYIMRTGFDSDEVVWSAL 200
N+ TL +L+A S + G + ++ G D+ ++ L
Sbjct: 412 ----------------NRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACL 455
Query: 201 SDMYGKCGSINE-ARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPN 259
D+ G+ G E R+I + + D W A++G G E G ELIK + P
Sbjct: 456 IDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIK--LDPE 513
Query: 260 AFTFAGVLNAC-ADHAAEELGKQVHGYMTR 288
+ +L++ ADH EL +++ G M +
Sbjct: 514 SSAPYILLSSIYADHGKWELVEKLRGVMKK 543
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/470 (37%), Positives = 279/470 (59%), Gaps = 21/470 (4%)
Query: 11 LKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDM 70
+ +A + ++ + +++L+ QN +EE L S + NCLL
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLLGG 228
Query: 71 YAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMI 130
+ K I +A+ FD M RDV S+NT+I+G+ + G +++AR LFDE P +D F+WTAM+
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 131 SGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGF 190
SGY++ EA +L+ M N+ + +++L+ + + + KE+ F
Sbjct: 289 SGYIQNRMVEEARELFDKMPE-----RNEVSWNAMLAGYVQGERMEMAKEL--------F 335
Query: 191 D----SDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFA 246
D + W+ + Y +CG I+EA+ +FDKM RD VSW AMI Y Q G E
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 247 LFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYS 306
LF ++ + G R N +F+ L+ CAD A ELGKQ+HG + + GY+ F +AL+ MY
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 307 KCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVG 366
KCG++E + +F M D+VSW ++IAGY+++G + AL +FE + + G +PD V
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVA 515
Query: 367 VLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMK 426
VL+AC+H GLVDKG QYF+++ + +G+ + HYAC+VDLL R+G +A +++ MP +
Sbjct: 516 VLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE 575
Query: 427 PDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
PD +W +LLG R+HGN +LA+ AA+ +F +EPEN YV ++N+YAS+
Sbjct: 576 PDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASS 625
Score = 184 bits (468), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 222/452 (49%), Gaps = 35/452 (7%)
Query: 10 RLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLD 69
R EAL++ ++ S Y+ +I +N E +K+ + + + N ++
Sbjct: 79 RCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP----ERDLVSWNVMIK 134
Query: 70 MYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAM 129
Y + N+ A+ LF+ M ERDVCS+NTM+SG+ + G ++ AR++FD MP++++ SW A+
Sbjct: 135 GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 130 ISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLG--KEIHGYIMR 187
+S YV+ ++ EA L++ +N+ A+ + CL G K+ R
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENW---------------ALVSWNCLLGGFVKKKKIVEAR 239
Query: 188 TGFDS----DEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREE 243
FDS D V W+ + Y + G I+EARQ+FD+ +DV +WTAM+ Y Q EE
Sbjct: 240 QFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEE 299
Query: 244 GFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVH 303
LF ++ + N ++ +L E+ K++ M + + ++
Sbjct: 300 ARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW----NTMIT 351
Query: 304 MYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIV 363
Y++CG + +K +F+ MP+ D VSW ++IAGY+Q+G +AL F + + G + +
Sbjct: 352 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 364 FVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKM 423
F L+ C ++ G Q H K G ++ + + G EA D+ +M
Sbjct: 412 FSSALSTCADVVALELGKQ-LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Query: 424 PMKPDKFLWASLLGGCRIHGNLDLAKRAAEAL 455
K D W +++ G HG ++A R E++
Sbjct: 471 AGK-DIVSWNTMIAGYSRHGFGEVALRFFESM 501
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 163/348 (46%), Gaps = 27/348 (7%)
Query: 91 DVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQ 150
D+ +N IS + + G +A +F MP+ + S+ MISGY+R + + + +
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGE-------FELAR 115
Query: 151 NFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSI 210
+ + + +S + ++ LGK + + + D W+ + Y + G +
Sbjct: 116 KLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNGCV 173
Query: 211 NEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNAC 270
++AR +FD+M +++ VSW A++ Y Q + EE LF KS ++ +L
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF----KSRENWALVSWNCLLGGF 229
Query: 271 ADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWT 330
+Q M D S+ + ++ Y++ G ++ ++++F+ P D+ +WT
Sbjct: 230 VKKKKIVEARQFFDSMNV--RDVVSW--NTIITGYAQSGKIDEARQLFDESPVQDVFTWT 285
Query: 331 SLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEK 390
++++GY QN M ++A E F+ + + + + + +L ++ + F + +
Sbjct: 286 AMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR 341
Query: 391 HGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGG 438
+ T+ ++ A+ G+ EA+++ KMP K D WA+++ G
Sbjct: 342 NVSTWNT-----MITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 46/312 (14%)
Query: 191 DSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSE 250
DSD W+ Y + G NEA ++F +M VS+ MI Y + G E LF E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 251 LIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGN 310
+ + + G + LGK + D S+ + ++ Y++ G
Sbjct: 121 MPERDLVSWNVMIKGYVR------NRNLGKARELFEIMPERDVCSW--NTMLSGYAQNGC 172
Query: 311 VENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFE-----------LLLKSGTQP 359
V++++ VF+ MP + VSW +L++ Y QN ++A F+ LL +
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 360 DHIV----------------FVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACI 403
IV + ++T +G +D+ Q F + T+TA +
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA-----M 287
Query: 404 VDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEP-EN 462
V ++ EA ++ KMP + ++ W ++L G +++AK LF++ P N
Sbjct: 288 VSGYIQNRMVEEARELFDKMPER-NEVSWNAMLAGYVQGERMEMAKE----LFDVMPCRN 342
Query: 463 PATYVTMANIYA 474
+T+ TM YA
Sbjct: 343 VSTWNTMITGYA 354
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 345 bits (885), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 280/455 (61%), Gaps = 3/455 (0%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P+ + +++ C +++A +EG+++H H+ G +++ L+ MY + G + DA +
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
FD+ RDV SY +I G+ G +E A+ LFDE+P +D SW AMISGY EAL
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
+L++ M N ++ T+ +V+SA + + LG+++H +I GF S+ + +AL D+
Sbjct: 252 ELFKDMMK-TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL 310
Query: 204 YGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTF 263
Y KCG + A +F+++ +DV+SW +IG Y +E LF E+++SG PN T
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 264 AGVLNACADHAAEELGKQVHGYMTR--IGYDPYSFAASALVHMYSKCGNVENSKKVFNGM 321
+L ACA A ++G+ +H Y+ + G S ++L+ MY+KCG++E + +VFN +
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 322 PRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGL 381
L SW ++I G+A +G D + + F + K G QPD I FVG+L+AC+H+G++D G
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 382 QYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRI 441
F ++ + + +T +HY C++DLL SG F EAE++I+ M M+PD +W SLL C++
Sbjct: 491 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 550
Query: 442 HGNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
HGN++L + AE L +IEPENP +YV ++NIYASA
Sbjct: 551 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASA 585
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 165/354 (46%), Gaps = 47/354 (13%)
Query: 154 NSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSD---MYGKCGSI 210
+S+ N +LS +L +Q LR+ IH +++ G + S L + + +
Sbjct: 29 DSIRNHPSLS-LLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGL 84
Query: 211 NEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNAC 270
A +F + + +++ W M + L+ +I G+ PN++TF VL +C
Sbjct: 85 PYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 144
Query: 271 ADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWT 330
A A + G+Q+HG++ ++G D + ++L+ MY + G +E++ KVF+ P D+VS+T
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204
Query: 331 SLIAGYAQNG-----------MPDK--------------------ALEYFELLLKSGTQP 359
+LI GYA G +P K ALE F+ ++K+ +P
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 360 DHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDV 419
D V V++AC +G ++ G Q H + HG ++DL ++ G A +
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQ-VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 420 ISKMPMKPDKFLWASLLGGCRIHGNLDLAKRA----AEALFEIEPENPATYVTM 469
++P K D W +L+GG + +++L K A E L E N T +++
Sbjct: 324 FERLPYK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 282 VHGYMTRIGYDPYSFAASALVHMYSKCGNVEN---SKKVFNGMPRPDLVSWTSLIAGYAQ 338
+H M +IG ++A S L+ + E + VF + P+L+ W ++ G+A
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 339 NGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTAD 398
+ P AL+ + ++ G P+ F VL +C + +G Q H K G
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG-QQIHGHVLKLGCDLDLY 170
Query: 399 HYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEI 458
+ ++ + ++GR +A V K P + D + +L+ G G ++ A++ + EI
Sbjct: 171 VHTSLISMYVQNGRLEDAHKVFDKSPHR-DVVSYTALIKGYASRGYIENAQKLFD---EI 226
Query: 459 EPENPATYVTMANIYA 474
++ ++ M + YA
Sbjct: 227 PVKDVVSWNAMISGYA 242
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/457 (38%), Positives = 272/457 (59%), Gaps = 6/457 (1%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKC---GNISDA 80
P +++ S+++ C L G+ VH + G ++ N L++MYAK G+
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 81 QTLFDEMQERDVCSYNTMISGFT--KGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQ 138
+FDEM +R S + + T ++ R +F+ MP++D S+ +I+GY +
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 139 PIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWS 198
+AL + R M + + FTLSSVL S + GKEIHGY++R G DSD + S
Sbjct: 223 YEDALRMVREMGTTDLK-PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS 281
Query: 199 ALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRP 258
+L DMY K I ++ ++F ++ RD +SW +++ Y Q GR E LF +++ + ++P
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 259 NAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVF 318
A F+ V+ ACA A LGKQ+HGY+ R G+ F ASALV MYSKCGN++ ++K+F
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 319 NGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVD 378
+ M D VSWT++I G+A +G +A+ FE + + G +P+ + FV VLTAC+H GLVD
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Query: 379 KGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGG 438
+ YF+S+ + +GL +HYA + DLL R+G+ EA + ISKM ++P +W++LL
Sbjct: 462 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 521
Query: 439 CRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
C +H NL+LA++ AE +F ++ EN YV M N+YAS
Sbjct: 522 CSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYAS 558
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 148/330 (44%), Gaps = 39/330 (11%)
Query: 157 SNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQI 216
S+K + +++ + I+ K++H +RT S S + +Y ++EA +
Sbjct: 3 SSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLL 61
Query: 217 FDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAE 276
F + V++W ++I + + + A F E+ SG P+ F VL +C
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 277 ELGKQVHGYMTRIGYDPYSFAASALVHMYSK---------CGNV---------------- 311
G+ VHG++ R+G D + +AL++MY+K GNV
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 312 -----------ENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPD 360
++ ++VF MPR D+VS+ ++IAGYAQ+GM + AL + + +PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 361 HIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVI 420
VL + V KG + H + G+ + +VD+ A+S R ++E V
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKE-IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 421 SKMPMKPDKFLWASLLGGCRIHGNLDLAKR 450
S++ + D W SL+ G +G + A R
Sbjct: 301 SRLYCR-DGISWNSLVAGYVQNGRYNEALR 329
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 139/332 (41%), Gaps = 64/332 (19%)
Query: 2 IDILCNQRRLK-------------------------------EALQILHQI----SHPSP 26
+D+ R++ EAL++ Q+ P
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343
Query: 27 SIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDE 86
+SS+I C L GK++H ++ GF +FI++ L+DMY+KCGNI A+ +FD
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 87 MQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQR----DNFSWTAMISGYVRYNQPIEA 142
M D S+ +I G G +A +LF+EM ++ + ++ A+++ EA
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Query: 143 LDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCL--RLGK--EIHGYIMRTGFDSDEVVWS 198
+ NS++ + L+ L +A+ L R GK E + +I + + VWS
Sbjct: 464 WGYF-------NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWS 516
Query: 199 ALSDMYGKCGSINEARQIFDKMVDRD---VVSWTAMIGRYFQEGRREEGFALFSELIKSG 255
L ++ A ++ +K+ D + ++ M Y GR +E L + K G
Sbjct: 517 TLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKG 576
Query: 256 IRPNAFTFAGVLNACADHAAEELGKQVHGYMT 287
+R AC + E+ + HG+++
Sbjct: 577 LRKKP--------AC---SWIEMKNKTHGFVS 597
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 338 bits (867), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 270/445 (60%), Gaps = 2/445 (0%)
Query: 31 SLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQER 90
++++ N + GK++H + GF+ + + + LL MYA G ISDA+ +F + +R
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 91 DVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQ 150
+ YN+++ G G +E A LF M ++D+ SW AMI G + EA++ +R M+
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 151 NFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSI 210
+ +++ SVL A + + GK+IH I+RT F V SAL DMY KC +
Sbjct: 263 -VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 211 NEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNAC 270
+ A+ +FD+M ++VVSWTAM+ Y Q GR EE +F ++ +SGI P+ +T ++AC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 271 ADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWT 330
A+ ++ E G Q HG G Y +++LV +Y KCG++++S ++FN M D VSWT
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 331 SLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEK 390
++++ YAQ G + ++ F+ +++ G +PD + GV++AC+ AGLV+KG +YF + +
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 391 HGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKR 450
+G+ + HY+C++DL +RSGR EA I+ MP PD W +LL CR GNL++ K
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKW 561
Query: 451 AAEALFEIEPENPATYVTMANIYAS 475
AAE+L E++P +PA Y +++IYAS
Sbjct: 562 AAESLIELDPHHPAGYTLLSSIYAS 586
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 212/422 (50%), Gaps = 34/422 (8%)
Query: 46 KKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKG 105
K +H ++ + P F+ N ++ YA + + A+ +FD + + ++ S+N ++ ++K
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 106 GSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYR-MMQNFENSVSNKFTLSS 164
G + + + F+++P RD +W +I GY A+ Y MM++F +++ + TL +
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT-RVTLMT 144
Query: 165 VLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDR- 223
+L S+ + LGK+IHG +++ GF+S +V S L MY G I++A+++F + DR
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 224 -----------------------------DVVSWTAMIGRYFQEGRREEGFALFSELIKS 254
D VSW AMI Q G +E F E+
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 255 GIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENS 314
G++ + + F VL AC A GKQ+H + R + + + SAL+ MY KC + +
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324
Query: 315 KKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHA 374
K VF+ M + ++VSWT+++ GY Q G ++A++ F + +SG PDH ++AC +
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 375 GLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWAS 434
+++G Q FH GL + +V L + G ++ + ++M ++ D W +
Sbjct: 385 SSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTA 442
Query: 435 LL 436
++
Sbjct: 443 MV 444
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 163/314 (51%), Gaps = 34/314 (10%)
Query: 29 YSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQ 88
+ S++ C A+ EGK++H+ + + F+ +++ + L+DMY KC + A+T+FD M+
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 89 ERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRM 148
+++V S+ M+ G+ + G E+A +F +M QR
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDM-QRSGID----------------------- 368
Query: 149 MQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCG 208
+ +TL +SA + + L G + HG + +G V ++L +YGKCG
Sbjct: 369 --------PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 209 SINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLN 268
I+++ ++F++M RD VSWTAM+ Y Q GR E LF ++++ G++P+ T GV++
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Query: 269 ACADHAAEELGKQVHGYMT-RIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMP-RPDL 326
AC+ E G++ MT G P S ++ ++S+ G +E + + NGMP PD
Sbjct: 481 ACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDA 540
Query: 327 VSWTSLIAGYAQNG 340
+ WT+L++ G
Sbjct: 541 IGWTTLLSACRNKG 554
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 162/390 (41%), Gaps = 83/390 (21%)
Query: 162 LSSVLSAVSAIQCLRLG--------KEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEA 213
++S +V QC+ LG K IHG I+R + +++ + Y S A
Sbjct: 1 MASNYYSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYA 60
Query: 214 RQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELI-KSGIRPN----AFTFAGVLN 268
R++FD++ ++ SW ++ Y + G E + F +L + G+ N ++ +G++
Sbjct: 61 RRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVG 120
Query: 269 ACA--------DHAAE-------------------ELGKQVHGYMTRIGYDPYSFAASAL 301
A D +A LGKQ+HG + ++G++ Y S L
Sbjct: 121 AAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 180
Query: 302 VHMYSKCGNVENSKKVFNGMP------------------------------RPDLVSWTS 331
++MY+ G + ++KKVF G+ D VSW +
Sbjct: 181 LYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAA 240
Query: 332 LIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKH 391
+I G AQNG+ +A+E F + G + D F VL AC G +++G Q I
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR-- 298
Query: 392 GLTYTADHY---ACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLA 448
T DH + ++D+ + H A+ V +M K + W +++ G +G A
Sbjct: 299 --TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVG---YGQTGRA 352
Query: 449 KRAAEALFEIEPE--NPATYVTMANIYASA 476
+ A + +++ +P Y I A A
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 335 bits (860), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/485 (36%), Positives = 268/485 (55%), Gaps = 72/485 (14%)
Query: 29 YSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQ 88
++S++ C + +G +VHS + S F V+I + L+DMY+KCGN++DA
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDA-------- 206
Query: 89 ERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRM 148
+ +FDEM R+ SW ++I+ + + +EALD+++M
Sbjct: 207 -----------------------QRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQM 243
Query: 149 MQNFENSVS-NKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTG-FDSDEVVWSALSDMYGK 206
M E+ V ++ TL+SV+SA +++ +++G+E+HG +++ +D ++ +A DMY K
Sbjct: 244 M--LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK 301
Query: 207 CGSINEARQIFD-------------------------------KMVDRDVVSWTAMIGRY 235
C I EAR IFD KM +R+VVSW A+I Y
Sbjct: 302 CSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGY 361
Query: 236 FQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYS 295
Q G EE +LF L + + P ++FA +L ACAD A LG Q H ++ + G+ S
Sbjct: 362 TQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS 421
Query: 296 ------FAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYF 349
F ++L+ MY KCG VE VF M D VSW ++I G+AQNG ++ALE F
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELF 481
Query: 350 ELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLAR 409
+L+SG +PDHI +GVL+AC HAG V++G YF S+ G+ DHY C+VDLL R
Sbjct: 482 REMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541
Query: 410 SGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTM 469
+G EA+ +I +MPM+PD +W SLL C++H N+ L K AE L E+EP N YV +
Sbjct: 542 AGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLL 601
Query: 470 ANIYA 474
+N+YA
Sbjct: 602 SNMYA 606
Score = 255 bits (651), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 242/432 (56%), Gaps = 43/432 (9%)
Query: 46 KKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKG 105
+ VH+ + SGF +FI N L+D Y+KCG++ D + +FD+M +R++ ++N++++G TK
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 106 GSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSV 165
G L++A +LF MP+RD +W +M+SG+ ++++ EAL + MM E V N+++ +SV
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK-EGFVLNEYSFASV 158
Query: 166 LSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDV 225
LSA S + + G ++H I ++ F SD + SAL DMY KCG++N+A+++FD+M DR+V
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 226 VSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGY 285
VSW ++I + Q G E +F +++S + P+ T A V++ACA +A ++G++VHG
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 286 MTRIGYDPYSFAAS-ALVHMYSKCGNVENSKKVFNGMP---------------------- 322
+ + S A V MY+KC ++ ++ +F+ MP
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 323 ---------RPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTH 373
++VSW +LIAGY QNG ++AL F LL + P H F +L AC
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 398
Query: 374 AGLVDKGLQ-YFHSIKEKHGLTYTA----DHYA--CIVDLLARSGRFHEAEDVISKMPMK 426
+ G+Q + H + KHG + + D + ++D+ + G E V KM M+
Sbjct: 399 LAELHLGMQAHVHVL--KHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-ME 455
Query: 427 PDKFLWASLLGG 438
D W +++ G
Sbjct: 456 RDCVSWNAMIIG 467
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 119/249 (47%), Gaps = 44/249 (17%)
Query: 263 FAGVLNACADHAAEEL-GKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGM 321
FA +L++C + + VH + + G+ F + L+ YSKCG++E+ ++VF+ M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 322 PR-------------------------------PDLVSWTSLIAGYAQNGMPDKALEYFE 350
P+ D +W S+++G+AQ+ ++AL YF
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 351 LLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHY--ACIVDLLA 408
++ K G + F VL+AC+ ++KG+Q HS+ K + +D Y + +VD+ +
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ-VHSLIAKS--PFLSDVYIGSALVDMYS 198
Query: 409 RSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFE--IEPENPATY 466
+ G ++A+ V +M + + W SL+ +G A + + E +EP+
Sbjct: 199 KCGNVNDAQRVFDEMGDR-NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE---- 253
Query: 467 VTMANIYAS 475
VT+A++ ++
Sbjct: 254 VTLASVISA 262
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFK------PGVFISNCLLDMYAKCGNI 77
P+ ++++++ C L G + H H+ GFK +F+ N L+DMY KCG +
Sbjct: 384 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 443
Query: 78 SDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYN 137
+ +F +M ERD S+N MI GF + G +A LF EM + SG
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE----------SG----E 489
Query: 138 QPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRT-GFDSDEVV 196
+P + T+ VLSA + G+ + R G
Sbjct: 490 KP------------------DHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 197 WSALSDMYGKCGSINEARQIFDKM-VDRDVVSWTAMIG 233
++ + D+ G+ G + EA+ + ++M + D V W +++
Sbjct: 532 YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 569
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 334 bits (856), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 171/477 (35%), Positives = 276/477 (57%), Gaps = 2/477 (0%)
Query: 1 AIDILCNQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPG 60
AI LC++ L+EA Q + S+++ IQ C ++L GK++H L SGF
Sbjct: 19 AIATLCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSD 78
Query: 61 VFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQ 120
FI N L+ MY+K G+ A ++ M++++ S N +I+G+ + G L AR +FDEMP
Sbjct: 79 KFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPD 138
Query: 121 RDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKE 180
R +W AMI+G +++ E L L+R M S +++TL SV S + ++ + +G++
Sbjct: 139 RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS-PDEYTLGSVFSGSAGLRSVSIGQQ 197
Query: 181 IHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGR 240
IHGY ++ G + D VV S+L+ MY + G + + + M R++V+W +I Q G
Sbjct: 198 IHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGC 257
Query: 241 REEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASA 300
E L+ + SG RPN TF VL++C+D A G+Q+H +IG S+
Sbjct: 258 PETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSS 317
Query: 301 LVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLL-KSGTQP 359
L+ MYSKCG + ++ K F+ D V W+S+I+ Y +G D+A+E F + ++ +
Sbjct: 318 LISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEI 377
Query: 360 DHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDV 419
+ + F+ +L AC+H+GL DKGL+ F + EK+G HY C+VDLL R+G +AE +
Sbjct: 378 NEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAI 437
Query: 420 ISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
I MP+K D +W +LL C IH N ++A+R + + +I+P + A YV +AN++ASA
Sbjct: 438 IRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASA 494
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 333 bits (854), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 272/448 (60%), Gaps = 33/448 (7%)
Query: 29 YSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQ 88
Y++L++ C + L +G+ VH+H+ S F+ + + N LL+MYAKC
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-------------- 108
Query: 89 ERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRM 148
GSLE+AR +F++MPQRD +WT +ISGY ++++P +AL +
Sbjct: 109 -----------------GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 149 MQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCG 208
M F S N+FTLSSV+ A +A + G ++HG+ ++ GFDS+ V SAL D+Y + G
Sbjct: 152 MLRFGYS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210
Query: 209 SINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLN 268
+++A+ +FD + R+ VSW A+I + + E+ LF +++ G RP+ F++A +
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 269 ACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVS 328
AC+ E GK VH YM + G +FA + L+ MY+K G++ +++K+F+ + + D+VS
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS 330
Query: 329 WTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIK 388
W SL+ YAQ+G +A+ +FE + + G +P+ I F+ VLTAC+H+GL+D+G Y+ +K
Sbjct: 331 WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 390
Query: 389 EKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLA 448
K G+ A HY +VDLL R+G + A I +MP++P +W +LL CR+H N +L
Sbjct: 391 -KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELG 449
Query: 449 KRAAEALFEIEPENPATYVTMANIYASA 476
AAE +FE++P++P +V + NIYAS
Sbjct: 450 AYAAEHVFELDPDDPGPHVILYNIYASG 477
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 146/311 (46%), Gaps = 33/311 (10%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P+ SS+I+ R G ++H GF V + + LLD+Y + G + DAQ +
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
FD ++ R+ S+N +I+G + E+A LF M RD F
Sbjct: 219 FDALESRNDVSWNALIAGHARRSGTEKALELFQGM-LRDGFR------------------ 259
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
+ F+ +S+ A S+ L GK +H Y++++G + L DM
Sbjct: 260 -------------PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 204 YGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTF 263
Y K GSI++AR+IFD++ RDVVSW +++ Y Q G +E F E+ + GIRPN +F
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 264 AGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMP- 322
VL AC+ + G + M + G P ++ +V + + G++ + + MP
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Query: 323 RPDLVSWTSLI 333
P W +L+
Sbjct: 427 EPTAAIWKALL 437
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 66/256 (25%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
PS Y+SL C LE+GK VH+++ SG K F N LLDMYAK G+I DA+ +
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
FD + +RDV S+N++++ + + G ++A F+EM + +R
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-----------IR-------- 360
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
N+ + SVL+A S L G + + + G + + + D+
Sbjct: 361 -------------PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Query: 204 YGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTF 263
G+ G +N A + ++M I P A +
Sbjct: 408 LGRAGDLNRALRFIEEM----------------------------------PIEPTAAIW 433
Query: 264 AGVLNACADHAAEELG 279
+LNAC H ELG
Sbjct: 434 KALLNACRMHKNTELG 449
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 331 bits (848), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 270/448 (60%), Gaps = 17/448 (3%)
Query: 45 GKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTK 104
GK++H +S +F+ NCL+DMYAKCG + +A T+F M +DV S+N M++G+++
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 105 GGSLEQARNLFDEMPQR----DNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKF 160
G E A LF++M + D +W+A ISGY + EAL + R M + N+
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS-SGIKPNEV 366
Query: 161 TLSSVLSAVSAIQCLRLGKEIHGY-------IMRTGFDSDEVVWSALSDMYGKCGSINEA 213
TL SVLS +++ L GKEIH Y + + G + +V + L DMY KC ++ A
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 214 RQIFDKMV--DRDVVSWTAMIGRYFQEGRREEGFALFSELIKSG--IRPNAFTFAGVLNA 269
R +FD + +RDVV+WT MIG Y Q G + L SE+ + RPNAFT + L A
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 270 CADHAAEELGKQVHGYMTRIGYDPYS-FAASALVHMYSKCGNVENSKKVFNGMPRPDLVS 328
CA AA +GKQ+H Y R + F ++ L+ MY+KCG++ +++ VF+ M + V+
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT 546
Query: 329 WTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIK 388
WTSL+ GY +G ++AL F+ + + G + D + + VL AC+H+G++D+G++YF+ +K
Sbjct: 547 WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Query: 389 EKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLA 448
G++ +HYAC+VDLL R+GR + A +I +MPM+P +W + L CRIHG ++L
Sbjct: 607 TVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666
Query: 449 KRAAEALFEIEPENPATYVTMANIYASA 476
+ AAE + E+ + +Y ++N+YA+A
Sbjct: 667 EYAAEKITELASNHDGSYTLLSNLYANA 694
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 222/477 (46%), Gaps = 85/477 (17%)
Query: 17 ILHQIS-HPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCG 75
++H +S P + + + C + ++ G+ H+ +GF VF+ N L+ MY++C
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 76 NISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVR 135
++SDA+ +FDEM DV S+N++I + K G
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLG----------------------------- 207
Query: 136 YNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEV 195
+P AL+++ M N + TL +VL +++ LGK++H + + + +
Sbjct: 208 --KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 196 VWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFS------ 249
V + L DMY KCG ++EA +F M +DVVSW AM+ Y Q GR E+ LF
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 250 -----------------------------ELIKSGIRPNAFTFAGVLNACADHAAEELGK 280
+++ SGI+PN T VL+ CA A GK
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 281 QVHGY-------MTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGM-PRP-DLVSWTS 331
++H Y + + G+ + + L+ MY+KC V+ ++ +F+ + P+ D+V+WT
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 332 LIAGYAQNGMPDKALEYFELLLKSG--TQPDHIVFVGVLTACTHAGLVDKGLQ-YFHSIK 388
+I GY+Q+G +KALE + + T+P+ L AC + G Q + ++++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 389 EKHGLT--YTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHG 443
+ + ++ C++D+ A+ G +A V M M ++ W SL+ G +HG
Sbjct: 506 NQQNAVPLFVSN---CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 196/442 (44%), Gaps = 54/442 (12%)
Query: 73 KCGNISDAQTLFDEMQERDVCSYNT---MISGFTKGGSLEQARNLFDEMPQRDN--FSWT 127
KC IS + + ++ + + N +IS + G L A +L P D + W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 128 AMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMR 187
++I Y + L L+ +M + + N +T V A I +R G+ H +
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDN-YTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 188 TGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFAL 247
TGF S+ V +AL MY +C S+++AR++FD+M DVVSW ++I Y + G+ + +
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 248 FSELIKS-GIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYS 306
FS + G RP+ T VL CA LGKQ+H + F + LV MY+
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 307 KCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFE---------------- 350
KCG ++ + VF+ M D+VSW +++AGY+Q G + A+ FE
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 351 -------------------LLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKH 391
+L SG +P+ + + VL+ C G + G + H K+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE-IHCYAIKY 394
Query: 392 GLTYTADHYA-------CIVDLLARSGRFHEAEDVISKM-PMKPDKFLWASLLGGCRIHG 443
+ + + ++D+ A+ + A + + P + D W ++GG HG
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 444 NLDLAKRAAEALFEIEPENPAT 465
+ A +A E L E+ E+ T
Sbjct: 455 D---ANKALELLSEMFEEDCQT 473
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 324 bits (831), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 271/491 (55%), Gaps = 40/491 (8%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P + +L + C + A + GK++H SG F+ + MY +CG + DA+ +
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMP----QRDNFSWTAMISGYVRYNQP 139
FD M ++DV + + ++ + + G LE+ + EM + + SW ++SG+ R
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 140 IEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSA 199
EA+ +++ + + ++ T+SSVL +V + L +G+ IHGY+++ G D+ V SA
Sbjct: 234 KEAVVMFQKIHHL-GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISA 292
Query: 200 LSDMYGKCGSINEARQIFDK--------------------MVDR---------------D 224
+ DMYGK G + +F++ +VD+ +
Sbjct: 293 MIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELN 352
Query: 225 VVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHG 284
VVSWT++I Q G+ E LF E+ +G++PN T +L AC + AA G+ HG
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHG 412
Query: 285 YMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDK 344
+ R+ SAL+ MY+KCG + S+ VFN MP +LV W SL+ G++ +G +
Sbjct: 413 FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKE 472
Query: 345 ALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIV 404
+ FE L+++ +PD I F +L+AC GL D+G +YF + E++G+ +HY+C+V
Sbjct: 473 VMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMV 532
Query: 405 DLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPA 464
+LL R+G+ EA D+I +MP +PD +W +LL CR+ N+DLA+ AAE LF +EPENP
Sbjct: 533 NLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPG 592
Query: 465 TYVTMANIYAS 475
TYV ++NIYA+
Sbjct: 593 TYVLLSNIYAA 603
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 198/467 (42%), Gaps = 104/467 (22%)
Query: 47 KVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGG 106
+ H+ + SG + +IS L+ Y+ +DA + + + + S++++I TK
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 107 SLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVL 166
Q+ +F M FS + +V + N F + + L
Sbjct: 96 LFTQSIGVFSRM-----FSHGLIPDSHV---------------------LPNLFKVCAEL 129
Query: 167 SAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVV 226
SA ++GK+IH +G D D V ++ MY +CG + +AR++FD+M D+DVV
Sbjct: 130 SA------FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVV 183
Query: 227 SWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNA----------------- 269
+ +A++ Y ++G EE + SE+ SGI N ++ G+L+
Sbjct: 184 TCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Query: 270 -----CADHAAE-------------ELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNV 311
C D +G+ +HGY+ + G SA++ MY K G+V
Sbjct: 244 HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHV 303
Query: 312 ENSKKVFN---------------GMPRPDL--------------------VSWTSLIAGY 336
+FN G+ R L VSWTS+IAG
Sbjct: 304 YGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGC 363
Query: 337 AQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYT 396
AQNG +ALE F + +G +P+H+ +L AC + + G + H + L
Sbjct: 364 AQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG-RSTHGFAVRVHLLDN 422
Query: 397 ADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHG 443
+ ++D+ A+ GR + ++ V + MP K + W SL+ G +HG
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHG 468
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 322 bits (824), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 250/452 (55%), Gaps = 44/452 (9%)
Query: 29 YSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGN--ISDAQTLFDE 86
Y L++ C L K +H+H++ G +++ N L+D Y++CG + DA LF++
Sbjct: 120 YPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEK 179
Query: 87 MQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLY 146
M ERD S+N+M+ G K G L AR LFDEMPQRD SW M+ GY R + +A +L+
Sbjct: 180 MSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELF 239
Query: 147 RMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGK 206
M N+VS WS + Y K
Sbjct: 240 EKMPE-RNTVS---------------------------------------WSTMVMGYSK 259
Query: 207 CGSINEARQIFDKMV--DRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFA 264
G + AR +FDKM ++VV+WT +I Y ++G +E L +++ SG++ +A
Sbjct: 260 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI 319
Query: 265 GVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRP 324
+L AC + LG ++H + R ++ +AL+ MY+KCGN++ + VFN +P+
Sbjct: 320 SILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK 379
Query: 325 DLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYF 384
DLVSW +++ G +G +A+E F + + G +PD + F+ VL +C HAGL+D+G+ YF
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYF 439
Query: 385 HSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGN 444
+S+++ + L +HY C+VDLL R GR EA V+ MPM+P+ +W +LLG CR+H
Sbjct: 440 YSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNE 499
Query: 445 LDLAKRAAEALFEIEPENPATYVTMANIYASA 476
+D+AK + L +++P +P Y ++NIYA+A
Sbjct: 500 VDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAA 531
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 204/424 (48%), Gaps = 46/424 (10%)
Query: 25 SPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLF 84
S I+ +Q + L + K++H+ + + I+ L+ + C + A +F
Sbjct: 15 SRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVF 74
Query: 85 DEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALD 144
+++QE +V N++I + + +QP +A
Sbjct: 75 NQVQEPNVHLCNSLI-------------------------------RAHAQNSQPYQAFF 103
Query: 145 LYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMY 204
++ MQ F ++ FT +L A S L + K +H +I + G SD V +AL D Y
Sbjct: 104 VFSEMQRF-GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCY 162
Query: 205 GKCG--SINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFT 262
+CG + +A ++F+KM +RD VSW +M+G + G + LF E+ + + +
Sbjct: 163 SRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----IS 218
Query: 263 FAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMP 322
+ +L+ A E+ K + + S+ S +V YSK G++E ++ +F+ MP
Sbjct: 219 WNTMLDGYA--RCREMSKAFELFEKMPERNTVSW--STMVMGYSKAGDMEMARVMFDKMP 274
Query: 323 RP--DLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKG 380
P ++V+WT +IAGYA+ G+ +A + ++ SG + D + +L ACT +GL+ G
Sbjct: 275 LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLG 334
Query: 381 LQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCR 440
++ HSI ++ L A ++D+ A+ G +A DV + +P K D W ++L G
Sbjct: 335 MR-IHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLG 392
Query: 441 IHGN 444
+HG+
Sbjct: 393 VHGH 396
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 129/280 (46%), Gaps = 12/280 (4%)
Query: 179 KEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQE 238
K++H I+R D + L C N A ++F+++ + +V ++I + Q
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 239 GRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAA 298
+ + F +FSE+ + G+ + FT+ +L AC+ + + K +H ++ ++G +
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP 155
Query: 299 SALVHMYSKCG--NVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSG 356
+AL+ YS+CG V ++ K+F M D VSW S++ G + G A F+ +
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM---- 211
Query: 357 TQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEA 416
Q D I + +L + K + F + E++ ++++ +V +++G A
Sbjct: 212 PQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWST-----MVMGYSKAGDMEMA 266
Query: 417 EDVISKMPMKPDKFL-WASLLGGCRIHGNLDLAKRAAEAL 455
+ KMP+ + W ++ G G L A R + +
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 321 bits (822), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 179/481 (37%), Positives = 259/481 (53%), Gaps = 38/481 (7%)
Query: 2 IDILCNQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGV 61
I LC + +LK+A+++L Q S PS Y LI C +L + +VH H+ +G
Sbjct: 53 IQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDP 112
Query: 62 FISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQR 121
F++ L+ MY+ G S++ AR +FD+ +R
Sbjct: 113 FLATKLIGMYSDLG-------------------------------SVDYARKVFDKTRKR 141
Query: 122 DNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQC----LRL 177
+ W A+ E L LY M N S++FT + VL A A +C L
Sbjct: 142 TIYVWNALFRALTLAGHGEEVLGLYWKM-NRIGVESDRFTYTYVLKACVASECTVNHLMK 200
Query: 178 GKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQ 237
GKEIH ++ R G+ S + + L DMY + G ++ A +F M R+VVSW+AMI Y +
Sbjct: 201 GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAK 260
Query: 238 EGRREEGFALFSELIK--SGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYS 295
G+ E F E+++ PN+ T VL ACA AA E GK +HGY+ R G D
Sbjct: 261 NGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSIL 320
Query: 296 FAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKS 355
SALV MY +CG +E ++VF+ M D+VSW SLI+ Y +G KA++ FE +L +
Sbjct: 321 PVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN 380
Query: 356 GTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHE 415
G P + FV VL AC+H GLV++G + F ++ HG+ +HYAC+VDLL R+ R E
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
Query: 416 AEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
A ++ M +P +W SLLG CRIHGN++LA+RA+ LF +EP+N YV +A+IYA
Sbjct: 441 AAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAE 500
Query: 476 A 476
A
Sbjct: 501 A 501
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 318 bits (815), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 271/476 (56%), Gaps = 41/476 (8%)
Query: 5 LCNQRRLKEALQILHQI-SH---PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPG 60
LC QR L A++ + + SH + YS LI+ C NRA+ EG + HL +G +P
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 61 VFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQ 120
+F+ N L++MY K ++DA LFD+MPQ
Sbjct: 96 MFLVNVLINMYVKFNLLNDAH-------------------------------QLFDQMPQ 124
Query: 121 RDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKE 180
R+ SWT MIS Y + +AL+L +M +N N +T SSVL + + + +R+
Sbjct: 125 RNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYTYSSVLRSCNGMSDVRM--- 180
Query: 181 IHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGR 240
+H I++ G +SD V SAL D++ K G +A +FD+MV D + W ++IG + Q R
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240
Query: 241 REEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASA 300
+ LF + ++G T VL AC A ELG Q H ++ + YD +A
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNA 298
Query: 301 LVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPD 360
LV MY KCG++E++ +VFN M D+++W+++I+G AQNG +AL+ FE + SGT+P+
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 361 HIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVI 420
+I VGVL AC+HAGL++ G YF S+K+ +G+ +HY C++DLL ++G+ +A ++
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Query: 421 SKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
++M +PD W +LLG CR+ N+ LA+ AA+ + ++PE+ TY ++NIYA++
Sbjct: 419 NEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANS 474
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 2 IDILCNQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGV 61
+D+ C L++AL++ +Q+ +S++I QN +E K+ +KSSG KP
Sbjct: 300 VDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Query: 62 FISNCLLDMYAKCGNISDAQTLFDEMQE-------RDVCSYNTMISGFTKGGSLEQARNL 114
+L + G + D F M++ R+ Y MI K G L+ A L
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVKL 417
Query: 115 FDEMP-QRDNFSWTAMI 130
+EM + D +W ++
Sbjct: 418 LNEMECEPDAVTWRTLL 434
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 270/476 (56%), Gaps = 6/476 (1%)
Query: 6 CNQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISN 65
C RRL A + +I +++LI ++ E + ++ SG +P F +
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254
Query: 66 CLLDMYAKCGNISDAQTL----FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQR 121
+L + + Q L RD N ++ ++K + + R LFDEMP+
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314
Query: 122 DNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEI 181
D S+ +IS Y + +Q +L +R MQ N F +++LS + + L++G+++
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRN-FPFATMLSIAANLSSLQMGRQL 373
Query: 182 HGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRR 241
H + DS V ++L DMY KC EA IF + R VSWTA+I Y Q+G
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433
Query: 242 EEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASAL 301
G LF+++ S +R + TFA VL A A A+ LGKQ+H ++ R G F+ S L
Sbjct: 434 GAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGL 493
Query: 302 VHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDH 361
V MY+KCG+++++ +VF MP + VSW +LI+ +A NG + A+ F +++SG QPD
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
Query: 362 IVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVIS 421
+ +GVLTAC+H G V++G +YF ++ +G+T HYAC++DLL R+GRF EAE ++
Sbjct: 554 VSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 613
Query: 422 KMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEP-ENPATYVTMANIYASA 476
+MP +PD+ +W+S+L CRIH N LA+RAAE LF +E + A YV+M+NIYA+A
Sbjct: 614 EMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAA 669
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 214/445 (48%), Gaps = 27/445 (6%)
Query: 2 IDILCNQRRLK-EALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPG 60
+ + CN ++ L L Q+ PSP+ + + ++V + + +GF
Sbjct: 1 MKLYCNSNEVRSRTLATLRQLRQPSPATFL-------------DTRRVDARIIKTGFDTD 47
Query: 61 VFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQ 120
SN +++ + G +S A+ ++DEM ++ S NTMISG K G + AR+LFD MP
Sbjct: 48 TCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPD 107
Query: 121 RDNFSWTAMISGYVRYNQPIEALDLYRMM-QNFENSVSNKFTLSSVLSAVSAIQCLRLGK 179
R +WT ++ Y R + EA L+R M ++ ++ + T +++L +
Sbjct: 108 RTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG 167
Query: 180 EIHGYIMRTGFDSDE--VVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQ 237
++H + ++ GFD++ V + L Y + ++ A +F+++ ++D V++ +I Y +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 238 EGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFA 297
+G E LF ++ +SG +P+ FTF+GVL A LG+Q+H G+ +
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 298 ASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGT 357
+ ++ YSK V ++ +F+ MP D VS+ +I+ Y+Q + +L +F + G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 358 QPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYA----CIVDLLARSGRF 413
+ F +L+ + + G Q H L TAD +VD+ A+ F
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQ-LHC----QALLATADSILHVGNSLVDMYAKCEMF 402
Query: 414 HEAEDVISKMPMKPDKFLWASLLGG 438
EAE + +P + W +L+ G
Sbjct: 403 EEAELIFKSLPQRT-TVSWTALISG 426
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 316 bits (809), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 265/481 (55%), Gaps = 41/481 (8%)
Query: 2 IDILCNQRRLKEALQILHQISHPSPSI----YSSLIQFCRQNRALEEGKKVHSHLKSSGF 57
I LC+ RL+EAL +++ P + Y +L+ C RAL +G++VH+H+ + +
Sbjct: 27 ISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 58 KPGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDE 117
P ++ LL Y KC LE AR + DE
Sbjct: 84 LPATYLRTRLLIFYGKCD-------------------------------CLEDARKVLDE 112
Query: 118 MPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRL 177
MP+++ SWTAMIS Y + EAL ++ M + N+FT ++VL++ L L
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK-PNEFTFATVLTSCIRASGLGL 171
Query: 178 GKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQ 237
GK+IHG I++ +DS V S+L DMY K G I EAR+IF+ + +RDVVS TA+I Y Q
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 238 EGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFA 297
G EE +F L G+ PN T+A +L A + A + GKQ H ++ R Y+
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 298 ASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLL-KSG 356
++L+ MYSKCGN+ ++++F+ MP +SW +++ GY+++G+ + LE F L+ +
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 357 TQPDHIVFVGVLTACTHAGLVDKGLQYFHS-IKEKHGLTYTADHYACIVDLLARSGRFHE 415
+PD + + VL+ C+H + D GL F + ++G +HY CIVD+L R+GR E
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 416 AEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
A + I +MP KP + SLLG CR+H ++D+ + L EIEPEN YV ++N+YAS
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYAS 471
Query: 476 A 476
A
Sbjct: 472 A 472
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 316 bits (809), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 269/473 (56%), Gaps = 34/473 (7%)
Query: 2 IDILCNQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGV 61
+D L N R+ +QI + P+ Y S+++ C + LE G+++HS + + F+
Sbjct: 468 LDDLRNSFRIFRQMQIEEIV--PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 62 FISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQR 121
++ + L+DMYAK G L+ A ++ +
Sbjct: 526 YVCSVLIDMYAKLGK-------------------------------LDTAWDILIRFAGK 554
Query: 122 DNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEI 181
D SWT MI+GY +YN +AL +R M + S++ L++ +SA + +Q L+ G++I
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLD-RGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 182 HGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRR 241
H +GF SD +AL +Y +CG I E+ F++ D ++W A++ + Q G
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 242 EEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASAL 301
EE +F + + GI N FTF + A ++ A + GKQVH +T+ GYD + +AL
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Query: 302 VHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDH 361
+ MY+KCG++ +++K F + + VSW ++I Y+++G +AL+ F+ ++ S +P+H
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 793
Query: 362 IVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVIS 421
+ VGVL+AC+H GLVDKG+ YF S+ ++GL+ +HY C+VD+L R+G A++ I
Sbjct: 794 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853
Query: 422 KMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYA 474
+MP+KPD +W +LL C +H N+++ + AA L E+EPE+ ATYV ++N+YA
Sbjct: 854 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 906
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 195/428 (45%), Gaps = 34/428 (7%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P+P +SS++ C++ +LE G+++H + GF ++ N L+ +Y GN+ A+
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE-- 343
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
++F M QRD ++ +I+G + +A+
Sbjct: 344 -----------------------------HIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
+L++ M + + + TL+S++ A SA L G+++H Y + GF S+ + AL ++
Sbjct: 375 ELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 204 YGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTF 263
Y KC I A F + +VV W M+ Y F +F ++ I PN +T+
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 264 AGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPR 323
+L C ELG+Q+H + + + ++ S L+ MY+K G ++ + +
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 324 PDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQY 383
D+VSWT++IAGY Q DKAL F +L G + D + ++AC + +G Q
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQ 612
Query: 384 FHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHG 443
H+ G + +V L +R G+ E+ + D W +L+ G + G
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSG 671
Query: 444 NLDLAKRA 451
N + A R
Sbjct: 672 NNEEALRV 679
Score = 168 bits (426), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 194/415 (46%), Gaps = 36/415 (8%)
Query: 24 PSPSIYSSLIQFC-RQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQT 82
P+ L++ C + N +L+EG+K+HS + G +S L D Y
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFY----------- 130
Query: 83 LFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEA 142
LF G L A +FDEMP+R F+W MI N E
Sbjct: 131 LFK--------------------GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEV 170
Query: 143 LDLYRMMQNFENSVSNKFTLSSVLSAVSAIQC-LRLGKEIHGYIMRTGFDSDEVVWSALS 201
L+ M + EN N+ T S VL A + ++IH I+ G VV + L
Sbjct: 171 FGLFVRMVS-ENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLI 229
Query: 202 DMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAF 261
D+Y + G ++ AR++FD + +D SW AMI + E LF ++ GI P +
Sbjct: 230 DLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPY 289
Query: 262 TFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGM 321
F+ VL+AC + E+G+Q+HG + ++G+ ++ +ALV +Y GN+ +++ +F+ M
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 322 PRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGL 381
+ D V++ +LI G +Q G +KA+E F+ + G +PD ++ AC+ G + +G
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG- 408
Query: 382 QYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLL 436
Q H+ K G +++L A+ A D + ++ + LW +L
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVML 462
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 315 bits (806), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 253/433 (58%), Gaps = 32/433 (7%)
Query: 42 LEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISG 101
L GK+VH + SG + + + L +Y+KCG
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCG-------------------------- 499
Query: 102 FTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFT 161
SLE++ LF +P +DN W +MISG+ Y EA+ L+ M + + + ++ T
Sbjct: 500 -----SLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD-DGTSPDEST 553
Query: 162 LSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMV 221
L++VL+ S+ L GKEIHGY +R G D + SAL +MY KCGS+ ARQ++D++
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 222 DRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQ 281
+ D VS +++I Y Q G ++GF LF +++ SG ++F + +L A A LG Q
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQ 673
Query: 282 VHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGM 341
VH Y+T+IG S+L+ MYSK G++++ K F+ + PDL++WT+LIA YAQ+G
Sbjct: 674 VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK 733
Query: 342 PDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYA 401
++AL+ + L+ + G +PD + FVGVL+AC+H GLV++ + +S+ + +G+ HY
Sbjct: 734 ANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYV 793
Query: 402 CIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPE 461
C+VD L RSGR EAE I+ M +KPD +W +LL C+IHG ++L K AA+ E+EP
Sbjct: 794 CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPS 853
Query: 462 NPATYVTMANIYA 474
+ Y++++NI A
Sbjct: 854 DAGAYISLSNILA 866
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 221/447 (49%), Gaps = 48/447 (10%)
Query: 14 ALQILHQISHPSPSI----YSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLD 69
AL+I ++ H I +S+I C + + E +VH+ + SGF ++ L+
Sbjct: 335 ALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALIS 394
Query: 70 MYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAM 129
MY+K G+I ++ +F+++ + QR N M
Sbjct: 395 MYSKSGDIDLSEQVFEDLDD-----------------------------IQRQNIV-NVM 424
Query: 130 ISGYVRYNQPIEALDLY-RMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRT 188
I+ + + +P +A+ L+ RM+Q E +++F++ S+LS + CL LGK++HGY +++
Sbjct: 425 ITSFSQSKKPGKAIRLFTRMLQ--EGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKS 479
Query: 189 GFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALF 248
G D V S+L +Y KCGS+ E+ ++F + +D W +MI + + G E LF
Sbjct: 480 GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLF 539
Query: 249 SELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKC 308
SE++ G P+ T A VL C+ H + GK++HGY R G D SALV+MYSKC
Sbjct: 540 SEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKC 599
Query: 309 GNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVL 368
G+++ +++V++ +P D VS +SLI+GY+Q+G+ F ++ SG D +L
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Query: 369 TACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPD 428
A + G Q H+ K GL + ++ + ++ G + S++ PD
Sbjct: 660 KAAALSDESSLGAQ-VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPD 717
Query: 429 KFLWASLLGGCRIHGNLDLAKRAAEAL 455
W +L+ HG +A EAL
Sbjct: 718 LIAWTALIASYAQHG------KANEAL 738
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 215/467 (46%), Gaps = 40/467 (8%)
Query: 7 NQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKP-----GV 61
N + +A ++ I P + +I +Q+R EE + S + GF+ G
Sbjct: 96 NSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGS 155
Query: 62 FISNC------LLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLF 115
IS C L C I ++ ++ + +I F+K E A +F
Sbjct: 156 VISACSALQAPLFSELVCCHTIKMGYFFYEVVE-------SALIDVFSKNLRFEDAYKVF 208
Query: 116 DEMPQRDNFSWTAMISGYVRYNQPIEALDLY-RMMQNFENSVSNKFTLSSVLSAVSAIQC 174
+ + + W +I+G +R DL+ M F+ + +T SSVL+A ++++
Sbjct: 209 RDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP--DSYTYSSVLAACASLEK 266
Query: 175 LRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGR 234
LR GK + +++ G + D V +A+ D+Y KCG + EA ++F ++ + VVSWT M+
Sbjct: 267 LRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325
Query: 235 YFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPY 294
Y + +F E+ SG+ N T V++AC + QVH ++ + G+
Sbjct: 326 YTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLD 385
Query: 295 SFAASALVHMYSKCGNVENSKKVF---NGMPRPDLVSWTSLIAGYAQNGMPDKALEYFEL 351
S A+AL+ MYSK G+++ S++VF + + R ++V+ +I ++Q+ P KA+ F
Sbjct: 386 SSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTR 443
Query: 352 LLKSGTQPDHIVFVGVLTA--CTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLAR 409
+L+ G + D +L+ C + G + H K GL + + L ++
Sbjct: 444 MLQEGLRTDEFSVCSLLSVLDCLNLG------KQVHGYTLKSGLVLDLTVGSSLFTLYSK 497
Query: 410 SGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALF 456
G E+ + +P K D WAS++ G +G L R A LF
Sbjct: 498 CGSLEESYKLFQGIPFK-DNACWASMISGFNEYGYL----REAIGLF 539
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 8/267 (2%)
Query: 175 LRLGKEIHGYIMRTGF-DSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIG 233
LR K + +++R D + +L Y GS+ +A ++FD + DVVS MI
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 234 RYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDP 293
Y Q EE FS++ G N ++ V++AC+ A + V + ++GY
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183
Query: 294 YSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLL 353
Y SAL+ ++SK E++ KVF ++ W ++IAG +N + F +
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 354 KSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYAC--IVDLLARSG 411
+PD + VL AC + L++ ++ + D + C IVDL A+ G
Sbjct: 244 VGFQKPDSYTYSSVLAACASL----EKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCG 299
Query: 412 RFHEAEDVISKMPMKPDKFLWASLLGG 438
EA +V S++P P W +L G
Sbjct: 300 HMAEAMEVFSRIP-NPSVVSWTVMLSG 325
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 110/292 (37%), Gaps = 71/292 (24%)
Query: 45 GKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTK 104
G +VH+++ G + + LL MY+K G+I D F ++ D+ ++ +I
Sbjct: 671 GAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALI----- 725
Query: 105 GGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSS 164
+ Y ++ + EAL +Y +M+ + +K T
Sbjct: 726 --------------------------ASYAQHGKANEALQVYNLMKE-KGFKPDKVTFVG 758
Query: 165 VLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRD 224
VLSA S HG ++ E + L+ M G E R
Sbjct: 759 VLSACS-----------HGGLV-------EESYFHLNSMVKDYGIEPENRH--------- 791
Query: 225 VVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHG 284
+ M+ + GR E + + + I+P+A + +L AC H ELGK
Sbjct: 792 ---YVCMVDALGRSGRLREAESFINNM---HIKPDALVWGTLLAACKIHGEVELGKVAAK 845
Query: 285 YMTRIGYDPYSFAAS-ALVHMYSKCG---NVENSKKVFNGMPRPDLVSWTSL 332
I +P A +L ++ ++ G VE ++K+ G W+S+
Sbjct: 846 --KAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/510 (32%), Positives = 283/510 (55%), Gaps = 44/510 (8%)
Query: 4 ILCNQ---RRLKEALQILHQISHPSPSIYSSLIQ-FCRQNRALEEGKKVHSHLKSSGFKP 59
++CN RR+ EA ++ +Q+ P S+Y+ +I + R NR ++
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 60 GVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMP 119
IS C+ +CG+++ A LFDEM ER V S+ M++G + G ++QA LF +MP
Sbjct: 101 NSMISGCV-----ECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMP 155
Query: 120 QRDNFSWTAMISGYVRYNQPIEALDLYRMM----------------QN---------FEN 154
+D +W +M+ GY+++ + +AL L++ M QN F+N
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 155 -------SVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKC 207
S S FT V++A + +G ++HG I++ GF +E V ++L Y C
Sbjct: 216 MLRCCIKSTSRPFT--CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANC 273
Query: 208 GSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVL 267
I ++R++FD+ V V WTA++ Y + E+ ++FS ++++ I PN TFA L
Sbjct: 274 KRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGL 333
Query: 268 NACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLV 327
N+C+ + GK++HG ++G + +F ++LV MYS GNV ++ VF + + +V
Sbjct: 334 NSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIV 393
Query: 328 SWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSI 387
SW S+I G AQ+G A F +++ +PD I F G+L+AC+H G ++KG + F+ +
Sbjct: 394 SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Query: 388 KEK-HGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLD 446
+ + HY C+VD+L R G+ EAE++I +M +KP++ +W +LL CR+H ++D
Sbjct: 454 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVD 513
Query: 447 LAKRAAEALFEIEPENPATYVTMANIYASA 476
++AA A+F ++ ++ A YV ++NIYASA
Sbjct: 514 RGEKAAAAIFNLDSKSSAAYVLLSNIYASA 543
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 288/497 (57%), Gaps = 34/497 (6%)
Query: 12 KEALQILHQISHPSPSI-YSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDM 70
+EAL++ +++ + +I +++++ C + AL+ GK++H+ + G + +++ L+++
Sbjct: 172 EEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNV 231
Query: 71 YAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMI 130
YAKCG++ A + ++++E D S + +ISG+ G + ++R LFD R W +MI
Sbjct: 232 YAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMI 291
Query: 131 SGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGF 190
SGY+ N +EAL L+ M+N + + TL++V++A + L GK++H + + G
Sbjct: 292 SGYIANNMKMEALVLFNEMRN--ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGL 349
Query: 191 DSDEVVWSALSDMYGKCGS-------------------------------INEARQIFDK 219
D VV S L DMY KCGS I++A+++F++
Sbjct: 350 IDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFER 409
Query: 220 MVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELG 279
+ ++ ++SW +M + Q G E F ++ K + + + + V++ACA ++ ELG
Sbjct: 410 IENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELG 469
Query: 280 KQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQN 339
+QV T +G D +S+L+ +Y KCG VE+ ++VF+ M + D V W S+I+GYA N
Sbjct: 470 EQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATN 529
Query: 340 GMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADH 399
G +A++ F+ + +G +P I F+ VLTAC + GLV++G + F S+K HG +H
Sbjct: 530 GQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEH 589
Query: 400 YACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIE 459
++C+VDLLAR+G EA +++ +MP D +W+S+L GC +G + K+AAE + E+E
Sbjct: 590 FSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELE 649
Query: 460 PENPATYVTMANIYASA 476
PEN YV ++ I+A++
Sbjct: 650 PENSVAYVQLSAIFATS 666
Score = 194 bits (494), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 227/520 (43%), Gaps = 97/520 (18%)
Query: 29 YSSLIQFCRQNRALEEGKKVHSHLKSSGFKPG-VFISNCLLDMYAKCGNISDAQTLFDEM 87
Y L+Q C ++ + L GF V ++N LL MY++ G + A+ LFDEM
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 88 QERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYR 147
+R+ S+NTMI G+ G + FD MP+RD +SW ++SG+ + + A L+
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 148 MMQNFE---------------------------NSVSNKFTLSSVLSAVSAIQCLRLGKE 180
M + N ++ TL++VL A + ++ L+ GK+
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQ 208
Query: 181 IHGYIMRTGFDSDEVVWSALSDMYGKCGS------------------------------- 209
IH I+ G + D + S+L ++Y KCG
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGR 268
Query: 210 INEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNA 269
+NE+R +FD+ +R V+ W +MI Y + E LF+E+ ++ R ++ T A V+NA
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINA 327
Query: 270 CADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGN------------------- 310
C E GKQ+H + + G AS L+ MYSKCG+
Sbjct: 328 CIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILL 387
Query: 311 ------------VENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQ 358
++++K+VF + L+SW S+ G++QNG + LEYF + K
Sbjct: 388 NSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLP 447
Query: 359 PDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAED 418
D + V++AC ++ G Q F + GL + ++DL + G
Sbjct: 448 TDEVSLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRR 506
Query: 419 VISKMPMKPDKFLWASLLGGCRIHGN----LDLAKRAAEA 454
V M +K D+ W S++ G +G +DL K+ + A
Sbjct: 507 VFDTM-VKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVA 545
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 59/139 (42%), Gaps = 6/139 (4%)
Query: 2 IDILCNQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGV 61
ID+ C ++ ++ + ++S+I N E + + +G +P
Sbjct: 492 IDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQ 551
Query: 62 FISNCLLDMYAKCGNISDAQTLFDEMQER-----DVCSYNTMISGFTKGGSLEQARNLFD 116
+L CG + + + LF+ M+ D ++ M+ + G +E+A NL +
Sbjct: 552 ITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVE 611
Query: 117 EMP-QRDNFSWTAMISGYV 134
EMP D W++++ G V
Sbjct: 612 EMPFDVDGSMWSSILRGCV 630
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 309 bits (791), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/454 (38%), Positives = 265/454 (58%), Gaps = 48/454 (10%)
Query: 63 ISNCLLDMYAKCGN----ISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEM 118
+SN L+ +Y+KC + + A+ +FDE+ E+D S+ TM++G+ K G + L + M
Sbjct: 186 VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 119 PQRDNF---SWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCL 175
DN ++ AMISGYV EAL++ R M + + ++FT SV+ A + L
Sbjct: 246 D--DNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL-DEFTYPSVIRACATAGLL 302
Query: 176 RLGKEIHGYIMRT---GFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMI 232
+LGK++H Y++R F D ++L +Y KCG +EAR IF+KM +D+VSW A++
Sbjct: 303 QLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALL 358
Query: 233 GRY------------FQE-------------------GRREEGFALFSELIKSGIRPNAF 261
Y F+E G EEG LFS + + G P +
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 262 TFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGM 321
F+G + +CA A G+Q H + +IG+D A +AL+ MY+KCG VE +++VF M
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 322 PRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGL 381
P D VSW +LIA Q+G +A++ +E +LK G +PD I + VLTAC+HAGLVD+G
Sbjct: 479 PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR 538
Query: 382 QYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRI 441
+YF S++ + + ADHYA ++DLL RSG+F +AE VI +P KP +W +LL GCR+
Sbjct: 539 KYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRV 598
Query: 442 HGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
HGN++L AA+ LF + PE+ TY+ ++N++A+
Sbjct: 599 HGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAA 632
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 234/506 (46%), Gaps = 93/506 (18%)
Query: 23 HPSPSI-------YSSLIQFCRQNR--ALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAK 73
P+P + Y++ ++ C R +L+ + VH ++ + GF+P I N L+D+Y K
Sbjct: 2 QPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCK 61
Query: 74 CGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMP--QRDNFSWTAMIS 131
++ A+ LFDE+ E D + TM+SG+ G + AR +F++ P RD + AMI+
Sbjct: 62 SSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMIT 121
Query: 132 GYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAI-----QCLRLGKEIHGYIM 186
G+ N A++L+ M++ E + FT +SVL+ ++ + QC+ + H +
Sbjct: 122 GFSHNNDGYSAINLFCKMKH-EGFKPDNFTFASVLAGLALVADDEKQCV----QFHAAAL 176
Query: 187 RTGFDSDEVVWSALSDMYGKCGS----INEARQIFDKMVDRDVVSWT------------- 229
++G V +AL +Y KC S ++ AR++FD+++++D SWT
Sbjct: 177 KSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFD 236
Query: 230 -------------------AMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNAC 270
AMI Y G +E + ++ SGI + FT+ V+ AC
Sbjct: 237 LGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRAC 296
Query: 271 ADHAAEELGKQVHGYMTRIGYDPYSFA-ASALVHMYSKCGNVENSKKVFNGMPRPDLVSW 329
A +LGKQVH Y+ R + +SF ++LV +Y KCG + ++ +F MP DLVSW
Sbjct: 297 ATAGLLQLGKQVHAYVLR--REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSW 354
Query: 330 TSLIAGY-------------------------------AQNGMPDKALEYFELLLKSGTQ 358
+L++GY A+NG ++ L+ F + + G +
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Query: 359 PDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAED 418
P F G + +C G G QY H+ K G + ++ + A+ G EA
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQY-HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQ 473
Query: 419 VISKMPMKPDKFLWASLLGGCRIHGN 444
V MP D W +L+ HG+
Sbjct: 474 VFRTMPCL-DSVSWNALIAALGQHGH 498
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 173/345 (50%), Gaps = 18/345 (5%)
Query: 7 NQRRLKEALQILHQISHPSPSI----YSSLIQFCRQNRALEEGKKVHSH-LKSSGFKPGV 61
N+ +EAL+++ ++ + Y S+I+ C L+ GK+VH++ L+ F
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS--F 320
Query: 62 FISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQR 121
N L+ +Y KCG +A+ +F++M +D+ S+N ++SG+ G + +A+ +F EM ++
Sbjct: 321 HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 122 DNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEI 181
+ SW MISG E L L+ M+ E + S + + + + G++
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKR-EGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 182 HGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRR 241
H +++ GFDS +AL MY KCG + EARQ+F M D VSW A+I Q G
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHG 499
Query: 242 EEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRI-----GYDPYSF 296
E ++ E++K GIRP+ T VL AC+ + G++ M + G D Y
Sbjct: 500 AEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY-- 557
Query: 297 AASALVHMYSKCGNVENSKKVFNGMP-RPDLVSWTSLIAGYAQNG 340
+ L+ + + G +++ V +P +P W +L++G +G
Sbjct: 558 --ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 304 bits (778), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 255/470 (54%), Gaps = 38/470 (8%)
Query: 43 EEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGF 102
E GK++H GF + ++N LL++YAK +++ A+ +F EM E +V S+N MI GF
Sbjct: 266 ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGF 325
Query: 103 T-----------------------------------KGGSLEQARNLFDEMPQRDNFSWT 127
+ G +E R +F +PQ +W
Sbjct: 326 GQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWN 385
Query: 128 AMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMR 187
AM+SGY Y EA+ +R MQ F+N +K TLS +LS+ + ++ L GK+IHG ++R
Sbjct: 386 AMLSGYSNYEHYEEAISNFRQMQ-FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Query: 188 TGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDR-DVVSWTAMIGRYFQEGRREEGFA 246
T + + S L +Y +C + + IFD ++ D+ W +MI + +
Sbjct: 445 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 504
Query: 247 LFSELIKSGIR-PNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMY 305
LF + ++ + PN +FA VL++C+ + G+Q HG + + GY SF +AL MY
Sbjct: 505 LFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMY 564
Query: 306 SKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFV 365
KCG ++++++ F+ + R + V W +I GY NG D+A+ + ++ SG +PD I FV
Sbjct: 565 CKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFV 624
Query: 366 GVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPM 425
VLTAC+H+GLV+ GL+ S++ HG+ DHY CIVD L R+GR +AE + P
Sbjct: 625 SVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPY 684
Query: 426 KPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
K LW LL CR+HG++ LA+R AE L ++P++ A YV ++N Y+S
Sbjct: 685 KSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSS 734
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 222/426 (52%), Gaps = 25/426 (5%)
Query: 30 SSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQE 89
+SL++ R R GK +H + G K ++ N LLD+Y +CG+ A+ +FDEM
Sbjct: 10 ASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSV 69
Query: 90 RDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMM 149
RDV S+N ++ K G L +A +FD MP+RD SW MIS VR +AL +Y+ M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 150 QNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGS 209
+ + ++FTL+SVLSA S + G HG ++TG D + V +AL MY KCG
Sbjct: 130 V-CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 210 I-NEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLN 268
I + ++F+ + + VS+TA+IG +E + E +F + + G++ ++ + +L+
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 269 ACA-----DHAAE----ELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFN 319
A D +E ELGKQ+H R+G+ ++L+ +Y+K ++ ++ +F
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 320 GMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDK 379
MP ++VSW +I G+ Q DK++E+ + SG QP+ + + VL AC +G V+
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 368
Query: 380 GLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKM------PMKPDKFLWA 433
G + F SI + + A +L+ + E+ IS +KPDK +
Sbjct: 369 GRRIFSSIPQPSVSAWNA--------MLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLS 420
Query: 434 SLLGGC 439
+L C
Sbjct: 421 VILSSC 426
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 167/346 (48%), Gaps = 34/346 (9%)
Query: 16 QILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCG 75
Q+ Q P + S ++ C + R LE GK++H + + I + L+ +Y++C
Sbjct: 406 QMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECE 465
Query: 76 NISDAQTLFDE-MQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYV 134
+ ++ +FD+ + E D+ +N+MISGF N+ D
Sbjct: 466 KMEISECIFDDCINELDIACWNSMISGFR--------HNMLD------------------ 499
Query: 135 RYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDE 194
+AL L+R M N+ + ++VLS+ S + L G++ HG ++++G+ SD
Sbjct: 500 -----TKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDS 554
Query: 195 VVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKS 254
V +AL+DMY KCG I+ ARQ FD ++ ++ V W MI Y GR +E L+ ++I S
Sbjct: 555 FVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISS 614
Query: 255 GIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRI-GYDPYSFAASALVHMYSKCGNVEN 313
G +P+ TF VL AC+ E G ++ M RI G +P +V + G +E+
Sbjct: 615 GEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLED 674
Query: 314 SKKVFNGMP-RPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQ 358
++K+ P + V W L++ +G A E L++ Q
Sbjct: 675 AEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQ 720
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 121/244 (49%), Gaps = 33/244 (13%)
Query: 158 NKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKC---------- 207
NK+ L+S+L +C GK IHG+I+R G SD + + L D+Y +C
Sbjct: 6 NKY-LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVF 64
Query: 208 ---------------------GSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFA 246
G + EA ++FD M +RDVVSW MI ++G E+
Sbjct: 65 DEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALV 124
Query: 247 LFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYS 306
++ ++ G P+ FT A VL+AC+ G + HG + G D F +AL+ MY+
Sbjct: 125 VYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYA 184
Query: 307 KCG-NVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFV 365
KCG V+ +VF + +P+ VS+T++I G A+ +A++ F L+ + G Q D +
Sbjct: 185 KCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLS 244
Query: 366 GVLT 369
+L+
Sbjct: 245 NILS 248
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 15/224 (6%)
Query: 18 LHQ--ISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCG 75
+HQ + P+ + +++++ C + +L G++ H + SG+ F+ L DMY KCG
Sbjct: 509 MHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCG 568
Query: 76 NISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEM----PQRDNFSWTAMIS 131
I A+ FD + ++ +N MI G+ G ++A L+ +M + D ++ ++++
Sbjct: 569 EIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLT 628
Query: 132 GYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCL-RLGK--EIHGYIMRT 188
L++ MQ + + + CL R G+ + T
Sbjct: 629 ACSHSGLVETGLEILSSMQRIHG------IEPELDHYICIVDCLGRAGRLEDAEKLAEAT 682
Query: 189 GFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMI 232
+ S V+W L G ++ AR++ +K++ D S A +
Sbjct: 683 PYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYV 726
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 303 bits (777), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/454 (33%), Positives = 255/454 (56%), Gaps = 33/454 (7%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P +SSL+ + LE K++H ++ +F+++ L+D Y KC +S AQ
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ-- 395
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
N+F + D +TAMISGY+ I++L
Sbjct: 396 -----------------------------NIFSQCNSVDVVVFTAMISGYLHNGLYIDSL 426
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
+++R + + S N+ TL S+L + + L+LG+E+HG+I++ GFD+ + A+ DM
Sbjct: 427 EMFRWLVKVKIS-PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 204 YGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTF 263
Y KCG +N A +IF+++ RD+VSW +MI R Q +F ++ SGI + +
Sbjct: 486 YAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSI 545
Query: 264 AGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPR 323
+ L+ACA+ +E GK +HG+M + ++ S L+ MY+KCGN++ + VF M
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 324 PDLVSWTSLIAGYAQNG-MPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQ 382
++VSW S+IA +G + D + E++ KSG +PD I F+ ++++C H G VD+G++
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 383 YFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIH 442
+F S+ E +G+ +HYAC+VDL R+GR EA + + MP PD +W +LLG CR+H
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Query: 443 GNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
N++LA+ A+ L +++P N YV ++N +A+A
Sbjct: 726 KNVELAEVASSKLMDLDPSNSGYYVLISNAHANA 759
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 198/428 (46%), Gaps = 35/428 (8%)
Query: 18 LHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNI 77
+ QIS P+ + ++ C ++ G ++H + SG I N LL MY+KCG
Sbjct: 232 MDQIS-PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRF 290
Query: 78 SDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYN 137
DA LF M D ++N MISG+ + G +E++ F E MIS V
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE-----------MISSGV--- 336
Query: 138 QPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVW 197
+ + T SS+L +VS + L K+IH YIMR D +
Sbjct: 337 ------------------LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 198 SALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIR 257
SAL D Y KC ++ A+ IF + DVV +TAMI Y G + +F L+K I
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 258 PNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKV 317
PN T +L A +LG+++HG++ + G+D A++ MY+KCG + + ++
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 318 FNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLV 377
F + + D+VSW S+I AQ+ P A++ F + SG D + L+AC +
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE 558
Query: 378 DKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLG 437
G + H KH L + ++D+ A+ G A +V M K + W S++
Sbjct: 559 SFG-KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIA 616
Query: 438 GCRIHGNL 445
C HG L
Sbjct: 617 ACGNHGKL 624
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 198/424 (46%), Gaps = 17/424 (4%)
Query: 23 HPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQT 82
P SI SS ++ N L + + + G P V CL+ N
Sbjct: 104 RPWNSIISSFVR----NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 83 LFDEMQERDV-CS---YNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVR--- 135
L D + + C+ +++I + + G ++ LFD + Q+D W M++GY +
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 136 YNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEV 195
+ I+ + RM Q N+V T VLS ++ + LG ++HG ++ +G D +
Sbjct: 220 LDSVIKGFSVMRMDQISPNAV----TFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 196 VWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSG 255
+ ++L MY KCG ++A ++F M D V+W MI Y Q G EE F E+I SG
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 256 IRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSK 315
+ P+A TF+ +L + + E KQ+H Y+ R F SAL+ Y KC V ++
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 316 KVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAG 375
+F+ D+V +T++I+GY NG+ +LE F L+K P+ I V +L
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 376 LVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASL 435
+ G + H K G + ++D+ A+ GR + A ++ ++ K D W S+
Sbjct: 456 ALKLGRE-LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSM 513
Query: 436 LGGC 439
+ C
Sbjct: 514 ITRC 517
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 166/349 (47%), Gaps = 34/349 (9%)
Query: 26 PSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFD 85
P S L+Q C L +GK+VH+ L + + +L MYA CG+ SD +F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 86 EMQER--DVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
+ R + +N++IS F + G L QA + +M F + +S + + AL
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKML---CFGVSPDVSTFPCLVKACVAL 151
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
++ + ++VS+ G D +E V S+L
Sbjct: 152 KNFKGIDFLSDTVSS-----------------------------LGMDCNEFVASSLIKA 182
Query: 204 YGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTF 263
Y + G I+ ++FD+++ +D V W M+ Y + G + FS + I PNA TF
Sbjct: 183 YLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF 242
Query: 264 AGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPR 323
VL+ CA +LG Q+HG + G D ++L+ MYSKCG +++ K+F M R
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 324 PDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACT 372
D V+W +I+GY Q+G+ +++L +F ++ SG PD I F +L + +
Sbjct: 303 ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 13/217 (5%)
Query: 266 VLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFN--GMPR 323
+L AC++ GKQVH ++ S+ ++ MY+ CG+ + K+F + R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 324 PDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQY 383
+ W S+I+ + +NG+ ++AL ++ +L G PD F ++ AC A KG+ +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV-ALKNFKGIDF 159
Query: 384 FHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKM---PMKPDKFLWASLLGGCR 440
G+ + ++ G+ DV SK+ ++ D +W +L G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKI----DVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 441 IHGNLDLAKRAAEALF--EIEPENPATYVTMANIYAS 475
G LD + + +I P N T+ + ++ AS
Sbjct: 216 KCGALDSVIKGFSVMRMDQISP-NAVTFDCVLSVCAS 251
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/447 (37%), Positives = 251/447 (56%), Gaps = 33/447 (7%)
Query: 31 SLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQER 90
S+ C +R + G+ VHS + F N LLDMY+KC
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC---------------- 344
Query: 91 DVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQ 150
G L+ A+ +F EM R S+T+MI+GY R EA+ L+ M+
Sbjct: 345 ---------------GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 151 NFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSI 210
E + +T+++VL+ + + L GK +H +I D V +AL DMY KCGS+
Sbjct: 390 E-EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 211 NEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSG-IRPNAFTFAGVLNA 269
EA +F +M +D++SW +IG Y + E +LF+ L++ P+ T A VL A
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 270 CADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSW 329
CA +A + G+++HGY+ R GY A++LV MY+KCG + + +F+ + DLVSW
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 330 TSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKE 389
T +IAGY +G +A+ F + ++G + D I FV +L AC+H+GLVD+G ++F+ ++
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 390 KHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAK 449
+ + T +HYACIVD+LAR+G +A I MP+ PD +W +LL GCRIH ++ LA+
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 450 RAAEALFEIEPENPATYVTMANIYASA 476
+ AE +FE+EPEN YV MANIYA A
Sbjct: 689 KVAEKVFELEPENTGYYVLMANIYAEA 715
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 215/413 (52%), Gaps = 34/413 (8%)
Query: 26 PSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFD 85
P S++Q C +++L++GK+V + ++ +GF + + L MY CG++ +A +FD
Sbjct: 94 PRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD 153
Query: 86 EMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDL 145
E++ +N +++ K G + LF +M M SG +E
Sbjct: 154 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKM----------MSSG-------VEM--- 193
Query: 146 YRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYG 205
+ +T S V + S+++ + G+++HG+I+++GF V ++L Y
Sbjct: 194 ------------DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 206 KCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAG 265
K ++ AR++FD+M +RDV+SW ++I Y G E+G ++F +++ SGI + T
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 266 VLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPD 325
V CAD LG+ VH + + + L+ MYSKCG+++++K VF M
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 326 LVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFH 385
+VS+TS+IAGYA+ G+ +A++ FE + + G PD VL C L+D+G +
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 386 SIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGG 438
IKE + L + ++D+ A+ G EAE V S+M +K D W +++GG
Sbjct: 422 WIKE-NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGG 472
Score = 199 bits (505), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 214/409 (52%), Gaps = 43/409 (10%)
Query: 40 RALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMI 99
R++ G+++H + SGF + N L+ Y K + A+ +FDEM ERDV S+N++I
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 100 SGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNK 159
+G+ G E+ ++F +M ++SG IE +DL
Sbjct: 269 NGYVSNGLAEKGLSVFVQM----------LVSG-------IE-IDLA------------- 297
Query: 160 FTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDK 219
T+ SV + + + + LG+ +H ++ F ++ + L DMY KCG ++ A+ +F +
Sbjct: 298 -TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE 356
Query: 220 MVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELG 279
M DR VVS+T+MI Y +EG E LF E+ + GI P+ +T VLN CA + + G
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Query: 280 KQVHGYMTR--IGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYA 337
K+VH ++ +G+D F ++AL+ MY+KCG+++ ++ VF+ M D++SW ++I GY+
Sbjct: 417 KRVHEWIKENDLGFDI--FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 338 QNGMPDKALEYFELLLKSGT-QPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYT 396
+N ++AL F LLL+ PD VL AC DKG + H ++G Y
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE-IHGYIMRNG--YF 531
Query: 397 ADHYAC--IVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHG 443
+D + +VD+ A+ G A + + K D W ++ G +HG
Sbjct: 532 SDRHVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHG 579
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 162/332 (48%), Gaps = 17/332 (5%)
Query: 151 NFENSV-----SNKF-----TLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSAL 200
N EN+V S K+ TL SVL + + L+ GKE+ +I GF D + S L
Sbjct: 76 NLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKL 135
Query: 201 SDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNA 260
S MY CG + EA ++FD++ + W ++ + G LF +++ SG+ ++
Sbjct: 136 SLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDS 195
Query: 261 FTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNG 320
+TF+ V + + + G+Q+HG++ + G+ + ++LV Y K V++++KVF+
Sbjct: 196 YTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE 255
Query: 321 MPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKG 380
M D++SW S+I GY NG+ +K L F +L SG + D V V C + L+ G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 381 LQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCR 440
+ HSI K + ++D+ ++ G A+ V +M + + S++ G
Sbjct: 316 -RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS-VVSYTSMIAGYA 373
Query: 441 IHGNLDLAKRAAEALFEIEPE--NPATYVTMA 470
G LA A + E+E E +P Y A
Sbjct: 374 REG---LAGEAVKLFEEMEEEGISPDVYTVTA 402
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 302 bits (773), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 264/475 (55%), Gaps = 36/475 (7%)
Query: 5 LCNQRRLKEALQILHQISHPS----PSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPG 60
L + R KE L ++S ++ ++ C R ++ GK +H+H+ GF
Sbjct: 184 LVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTT 243
Query: 61 VFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQ 120
+ ++N L MY +CG EMQ+ +C LF+ M +
Sbjct: 244 LCVANSLATMYTECG----------EMQD-GLC--------------------LFENMSE 272
Query: 121 RDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKE 180
RD SWT++I Y R Q ++A++ + M+N + N+ T +S+ SA +++ L G++
Sbjct: 273 RDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP-PNEQTFASMFSACASLSRLVWGEQ 331
Query: 181 IHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGR 240
+H ++ G + V +++ MY CG++ A +F M RD++SW+ +IG Y Q G
Sbjct: 332 LHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGF 391
Query: 241 REEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASA 300
EEGF FS + +SG +P F A +L+ + A E G+QVH G + S S+
Sbjct: 392 GEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSS 451
Query: 301 LVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPD 360
L++MYSKCG+++ + +F R D+VS T++I GYA++G +A++ FE LK G +PD
Sbjct: 452 LINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPD 511
Query: 361 HIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVI 420
+ F+ VLTACTH+G +D G YF+ ++E + + +HY C+VDLL R+GR +AE +I
Sbjct: 512 SVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMI 571
Query: 421 SKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
++M K D +W +LL C+ G+++ +RAAE + E++P VT+ANIY+S
Sbjct: 572 NEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSS 626
Score = 199 bits (505), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 228/471 (48%), Gaps = 67/471 (14%)
Query: 11 LKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDM 70
L A++++ P S+ S +++ C Q+ + G+ +H++ + V++ + LLDM
Sbjct: 93 LFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDM 152
Query: 71 YAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMI 130
Y + G I +++ +F EMP R+ +WTA+I
Sbjct: 153 YKRVGKI-------------------------------DKSCRVFSEMPFRNAVTWTAII 181
Query: 131 SGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGF 190
+G V + E L + M E +S+ +T + L A + ++ ++ GK IH +++ GF
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRSEE-LSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF 240
Query: 191 DSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSE 250
+ V ++L+ MY +CG + + +F+ M +RDVVSWT++I Y + G+ + F +
Sbjct: 241 VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIK 300
Query: 251 LIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGN 310
+ S + PN TFA + +ACA + G+Q+H + +G + +++++ MYS CGN
Sbjct: 301 MRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGN 360
Query: 311 VENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTA 370
+ ++ +F GM D++SW+++I GY Q G ++ +YF + +SGT+P +L+
Sbjct: 361 LVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSV 420
Query: 371 CTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEA---------EDVIS 421
+ +++ G Q H++ GL + + ++++ ++ G EA +D++S
Sbjct: 421 SGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVS 479
Query: 422 -------------------------KMPMKPDKFLWASLLGGCRIHGNLDL 447
K+ +PD + S+L C G LDL
Sbjct: 480 LTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDL 530
Score = 175 bits (443), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 174/344 (50%), Gaps = 3/344 (0%)
Query: 96 NTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENS 155
N+ + G+L AR +FD+MP D SWT++I YV N EAL L+ M+ +++
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 156 VS-NKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEAR 214
VS + LS VL A + G+ +H Y ++T S V S+L DMY + G I+++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 215 QIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHA 274
++F +M R+ V+WTA+I GR +EG FSE+ +S + +TFA L ACA
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 275 AEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIA 334
+ GK +H ++ G+ A++L MY++CG +++ +F M D+VSWTSLI
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 335 GYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLT 394
Y + G KA+E F + S P+ F + +AC + G Q H GL
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQ-LHCNVLSLGLN 342
Query: 395 YTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGG 438
+ ++ + + G A + M + D W++++GG
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIGG 385
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 140/381 (36%), Gaps = 106/381 (27%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P+ ++S+ C L G+++H ++ S G + +SN ++ MY+ CGN+ A
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV- 366
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
LF M RD SW+ +I GY + E
Sbjct: 367 ------------------------------LFQGMRCRDIISWSTIIGGYCQAGFGEEGF 396
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
+ M+ + F L+S+LS + + G+++H + G + + V S+L +M
Sbjct: 397 KYFSWMRQ-SGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 204 YGKCGSIN-------------------------------EARQIFDKMVDR----DVVSW 228
Y KCGSI EA +F+K + D V++
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515
Query: 229 TAMIGRYFQEGRREEGFALFSELIKS-GIRP----------------------------- 258
+++ G+ + GF F+ + ++ +RP
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMS 575
Query: 259 ---NAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPY-SFAASALVHMYSKCGNVENS 314
+ + +L AC E G++ + + DP + A L ++YS GN+E +
Sbjct: 576 WKKDDVVWTTLLIACKAKGDIERGRRAAERILEL--DPTCATALVTLANIYSSTGNLEEA 633
Query: 315 KKVFNGMPRPDLVS---WTSL 332
V M ++ W+S+
Sbjct: 634 ANVRKNMKAKGVIKEPGWSSI 654
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 301 bits (772), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 257/462 (55%), Gaps = 34/462 (7%)
Query: 17 ILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGN 76
+L S P + +++ C G+++H H+ G + F+ L+ MY KCG
Sbjct: 44 MLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGL 103
Query: 77 ISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFS--WTAMISGYV 134
++DA R +F+E PQ S + A+ISGY
Sbjct: 104 VADA-------------------------------RKVFEENPQSSQLSVCYNALISGYT 132
Query: 135 RYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDE 194
++ +A ++R M+ SV + T+ ++ + + L LG+ +HG ++ G DS+
Sbjct: 133 ANSKVTDAAYMFRRMKETGVSV-DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV 191
Query: 195 VVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKS 254
V ++ MY KCGS+ R++FD+M + +++W A+I Y Q G + L+ ++ S
Sbjct: 192 AVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSS 251
Query: 255 GIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENS 314
G+ P+ FT VL++CA A+++G +V + G+ P F ++A + MY++CGN+ +
Sbjct: 252 GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKA 311
Query: 315 KKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHA 374
+ VF+ MP LVSWT++I Y +GM + L F+ ++K G +PD VFV VL+AC+H+
Sbjct: 312 RAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHS 371
Query: 375 GLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWAS 434
GL DKGL+ F ++K ++ L +HY+C+VDLL R+GR EA + I MP++PD +W +
Sbjct: 372 GLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGA 431
Query: 435 LLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
LLG C+IH N+D+A+ A + E EP N YV M+NIY+ +
Sbjct: 432 LLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDS 473
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 4/213 (1%)
Query: 228 WTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMT 287
W + + E +L+ +++SG P+AF+F +L +CA + G+Q+H ++T
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 288 RIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVS--WTSLIAGYAQNGMPDKA 345
+ G + F +AL+ MY KCG V +++KVF P+ +S + +LI+GY N A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 346 LEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVD 405
F + ++G D + +G++ CT + G + H K GL +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLG-RSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 406 LLARSGRFHEAEDVISKMPMKPDKFLWASLLGG 438
+ + G + +MP+K W +++ G
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVK-GLITWNAVISG 231
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 301 bits (771), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 258/458 (56%), Gaps = 6/458 (1%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P Y S+++ C + + G+ VH ++ S +K +++ N L+ MY + N+ A+ L
Sbjct: 142 PDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRL 201
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEM----PQRDNFSWTAMISGYVRYNQP 139
FD M ERD S+N +I+ + G +A LFD+M + +W + G ++
Sbjct: 202 FDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNY 261
Query: 140 IEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSA 199
+ AL L M+NF S+ + + L A S I +RLGKEIHG + + +D + V +
Sbjct: 262 VGALGLISRMRNFPTSL-DPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNT 320
Query: 200 LSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPN 259
L MY KC + A +F + + + +W ++I Y Q + EE L E++ +G +PN
Sbjct: 321 LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPN 380
Query: 260 AFTFAGVLNACADHAAEELGKQVHGY-MTRIGYDPYSFAASALVHMYSKCGNVENSKKVF 318
+ T A +L CA A + GK+ H Y + R + Y+ ++LV +Y+K G + +K+V
Sbjct: 381 SITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVS 440
Query: 319 NGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVD 378
+ M + D V++TSLI GY G AL F+ + +SG +PDH+ V VL+AC+H+ LV
Sbjct: 441 DLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVH 500
Query: 379 KGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGG 438
+G + F ++ ++G+ H++C+VDL R+G +A+D+I MP KP WA+LL
Sbjct: 501 EGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
Query: 439 CRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
C IHGN + K AAE L E++PENP YV +AN+YA+A
Sbjct: 561 CHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAA 598
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 189/444 (42%), Gaps = 68/444 (15%)
Query: 30 SSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQE 89
+SL+ C RA G +VH+H SSG + + L+ Y+ ++AQ++ +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 90 RDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMM 149
+N +I+ + K LF+E+ ++ M+S +R
Sbjct: 107 LHPLPWNVLIASYAK-------NELFEEVIA----AYKRMVSKGIR-------------- 141
Query: 150 QNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGS 209
+ FT SVL A + G+ +HG I + + S V +AL MY + +
Sbjct: 142 -------PDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 210 INEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGV--- 266
+ AR++FD+M +RD VSW A+I Y EG E F LF ++ SG+ + T+ +
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGG 254
Query: 267 --------------------------------LNACADHAAEELGKQVHGYMTRIGYDPY 294
L AC+ A LGK++HG YD
Sbjct: 255 CLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGI 314
Query: 295 SFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLK 354
+ L+ MYSKC ++ ++ VF L +W S+I+GYAQ ++A +L
Sbjct: 315 DNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLV 374
Query: 355 SGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFH 414
+G QP+ I +L C + G ++ I + + +VD+ A+SG+
Sbjct: 375 AGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIV 434
Query: 415 EAEDVISKMPMKPDKFLWASLLGG 438
A+ V S + K D+ + SL+ G
Sbjct: 435 AAKQV-SDLMSKRDEVTYTSLIDG 457
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 3/225 (1%)
Query: 154 NSVSNKFTL---SSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSI 210
++VS+ L +S+LSA ++ G ++H + + +G + V+ L Y
Sbjct: 35 SAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLH 94
Query: 211 NEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNAC 270
NEA+ I + + W +I Y + EE A + ++ GIRP+AFT+ VL AC
Sbjct: 95 NEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKAC 154
Query: 271 ADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWT 330
+ G+ VHG + Y + +AL+ MY + N+ ++++F+ M D VSW
Sbjct: 155 GETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWN 214
Query: 331 SLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAG 375
++I YA GM +A E F+ + SG + I + + C G
Sbjct: 215 AVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 301 bits (771), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 160/457 (35%), Positives = 262/457 (57%), Gaps = 29/457 (6%)
Query: 23 HPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQT 82
+P+ S + I+ C + GK+ H G++ +F+S+ L+ MY+ CG + DA+
Sbjct: 73 YPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARK 132
Query: 83 LFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEA 142
+FDE+ +R++ S+ +MI G+ G+ A +LF ++ +N AM
Sbjct: 133 VFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM------------- 179
Query: 143 LDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSD 202
F +S+ L SV+SA S + L + IH ++++ GFD V + L D
Sbjct: 180 ---------FLDSMG----LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLD 226
Query: 203 MYGKCGS--INEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRP-N 259
Y K G + AR+IFD++VD+D VS+ +++ Y Q G E F +F L+K+ + N
Sbjct: 227 AYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFN 286
Query: 260 AFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFN 319
A T + VL A + A +GK +H + R+G + ++++ MY KCG VE ++K F+
Sbjct: 287 AITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFD 346
Query: 320 GMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDK 379
M ++ SWT++IAGY +G KALE F ++ SG +P++I FV VL AC+HAGL +
Sbjct: 347 RMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVE 406
Query: 380 GLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGC 439
G ++F+++K + G+ +HY C+VDLL R+G +A D+I +M MKPD +W+SLL C
Sbjct: 407 GWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAAC 466
Query: 440 RIHGNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
RIH N++LA+ + LFE++ N Y+ +++IYA A
Sbjct: 467 RIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADA 503
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 185/375 (49%), Gaps = 19/375 (5%)
Query: 113 NLFDE-MPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSA 171
LF+ + + D FSW ++I+ R EAL + M+ + + + + A S+
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKL-SLYPTRSSFPCAIKACSS 88
Query: 172 IQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAM 231
+ + GK+ H G+ SD V SAL MY CG + +AR++FD++ R++VSWT+M
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 232 IGRYFQEGRREEGFALFSELI------KSGIRPNAFTFAGVLNACADHAAEELGKQVHGY 285
I Y G + +LF +L+ + ++ V++AC+ A+ L + +H +
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 286 MTRIGYDPYSFAASALVHMYSKCGN--VENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPD 343
+ + G+D + L+ Y+K G V ++K+F+ + D VS+ S+++ YAQ+GM +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 344 KALEYFELLLKSGTQP-DHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYAC 402
+A E F L+K+ + I VL A +H+G + G + H + GL
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDVIVGTS 327
Query: 403 IVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFE--IEP 460
I+D+ + GR A +M K + W +++ G +HG+ A +A E LF I+
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRS-WTAMIAGYGMHGH---AAKALE-LFPAMIDS 382
Query: 461 ENPATYVTMANIYAS 475
Y+T ++ A+
Sbjct: 383 GVRPNYITFVSVLAA 397
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 256/457 (56%), Gaps = 34/457 (7%)
Query: 23 HPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQT 82
+P+ +S+ ++ C ALE+G ++H GF+ V + N L+DMY+KCG I+
Sbjct: 104 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN---- 159
Query: 83 LFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEA 142
+A +F + R SW AMI+G+V +A
Sbjct: 160 ---------------------------EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKA 192
Query: 143 LDLYRMMQNFE-NSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFD--SDEVVWSA 199
LD + MMQ ++FTL+S+L A S+ + GK+IHG+++R+GF S + +
Sbjct: 193 LDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS 252
Query: 200 LSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPN 259
L D+Y KCG + AR+ FD++ ++ ++SW+++I Y QEG E LF L + + +
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID 312
Query: 260 AFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFN 319
+F + ++ AD A GKQ+ ++ + +++V MY KCG V+ ++K F
Sbjct: 313 SFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFA 372
Query: 320 GMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDK 379
M D++SWT +I GY ++G+ K++ F +L+ +PD + ++ VL+AC+H+G++ +
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE 432
Query: 380 GLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGC 439
G + F + E HG+ +HYAC+VDLL R+GR EA+ +I MP+KP+ +W +LL C
Sbjct: 433 GEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLC 492
Query: 440 RIHGNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
R+HG+++L K + L I+ +NPA YV M+N+Y A
Sbjct: 493 RVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQA 529
Score = 204 bits (520), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 218/441 (49%), Gaps = 48/441 (10%)
Query: 31 SLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQER 90
S+++ C + ++G +VH +L SG + SN L+DMY KC A +FD M ER
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 91 DVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQ 150
+V S++ ++SG G L+ + +LF EM ++ +
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY-------------------------- 104
Query: 151 NFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSI 210
N+FT S+ L A + L G +IHG+ ++ GF+ V ++L DMY KCG I
Sbjct: 105 ------PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 211 NEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGI--RPNAFTFAGVLN 268
NEA ++F ++VDR ++SW AMI + G + F + ++ I RP+ FT +L
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 269 ACADHAAEELGKQVHGYMTRIGYDPYSFA--ASALVHMYSKCGNVENSKKVFNGMPRPDL 326
AC+ GKQ+HG++ R G+ S A +LV +Y KCG + +++K F+ + +
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Query: 327 VSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQY-FH 385
+SW+SLI GYAQ G +A+ F+ L + +Q D ++ L+ +G Q
Sbjct: 279 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 338
Query: 386 SIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNL 445
++K GL + +VD+ + G EAE ++M +K D W ++ G HG
Sbjct: 339 AVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHG-- 393
Query: 446 DLAKRAAEALFE-----IEPE 461
L K++ +E IEP+
Sbjct: 394 -LGKKSVRIFYEMLRHNIEPD 413
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 364 FVGVLTACTHAGLVDKGLQ-YFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISK 422
V +L CT GL D+G Q + + +K GL +Y ++D+ + A V
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNY--LIDMYCKCREPLMAYKVFDS 66
Query: 423 MPMKPDKFLWASLLGGCRIHGNL 445
MP + + W++L+ G ++G+L
Sbjct: 67 MPER-NVVSWSALMSGHVLNGDL 88
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 253/452 (55%), Gaps = 32/452 (7%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P SS+++ C R L K +++++ +GF + N L+D+YAKCG+
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD------- 357
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
MI+ AR++F+ M +D SW ++ISGY++ +EA+
Sbjct: 358 --------------MIT----------ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
L++MM E ++ T ++S + + L+ GK +H +++G D V +AL DM
Sbjct: 394 KLFKMMMIMEEQ-ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 204 YGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTF 263
Y KCG + ++ +IF M D V+W +I + G G + +++ KS + P+ TF
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Query: 264 AGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPR 323
L CA AA+ LGK++H + R GY+ +AL+ MYSKCG +ENS +VF M R
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSR 572
Query: 324 PDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQY 383
D+V+WT +I Y G +KALE F + KSG PD +VF+ ++ AC+H+GLVD+GL
Sbjct: 573 RDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLAC 632
Query: 384 FHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHG 443
F +K + + +HYAC+VDLL+RS + +AE+ I MP+KPD +WAS+L CR G
Sbjct: 633 FEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSG 692
Query: 444 NLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
+++ A+R + + E+ P++P + +N YA+
Sbjct: 693 DMETAERVSRRIIELNPDDPGYSILASNAYAA 724
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 241/477 (50%), Gaps = 15/477 (3%)
Query: 2 IDILCNQRRLKEALQILHQISHPSPSIY--SSLIQFCRQNRALEEGKKVHSHLKSSGFKP 59
ID + R +L + ++S P+ ++Y +S+I+ +N E + + L+ S P
Sbjct: 46 IDKYSHFREPASSLSVFRRVS-PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 60 GVF-----ISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNL 114
+ I C A+ G++ Q L D E D+ N ++ +++ G L +AR +
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQIL-DMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 115 FDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQC 174
FDEMP RD SW ++ISGY + EAL++Y ++N V + FT+SSVL A +
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN-SWIVPDSFTVSSVLPAFGNLLV 222
Query: 175 LRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGR 234
++ G+ +HG+ +++G +S VV + L MY K +AR++FD+M RD VS+ MI
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG 282
Query: 235 YFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPY 294
Y + EE +F E + +P+ T + VL AC L K ++ YM + G+
Sbjct: 283 YLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLE 341
Query: 295 SFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLK 354
S + L+ +Y+KCG++ ++ VFN M D VSW S+I+GY Q+G +A++ F++++
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 355 SGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFH 414
Q DHI ++ +++ T + G + HS K G+ ++D+ A+ G
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 415 EAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEAL--FEIEPENPATYVTM 469
++ + S M D W +++ C G+ + + E+ P+ VT+
Sbjct: 461 DSLKIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 214/470 (45%), Gaps = 46/470 (9%)
Query: 12 KEALQILHQISH----PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCL 67
+EAL+I H++ + P SS++ +++G+ +H SG V ++N L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 68 LDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWT 127
+ MY K +DA+ +FDEM RD SYNTMI G+ K +E++ +F
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF------------ 296
Query: 128 AMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMR 187
++N + + T+SSVL A ++ L L K I+ Y+++
Sbjct: 297 ---------------------LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 188 TGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFAL 247
GF + V + L D+Y KCG + AR +F+ M +D VSW ++I Y Q G E L
Sbjct: 336 AGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKL 395
Query: 248 FSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSK 307
F ++ + + T+ +++ A + GK +H + G ++AL+ MY+K
Sbjct: 396 FKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAK 455
Query: 308 CGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGV 367
CG V +S K+F+ M D V+W ++I+ + G L+ + KS PD F+
Sbjct: 456 CGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT 515
Query: 368 LTACTHAGLVDKGL-QYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMK 426
L C A L K L + H + G ++++ ++ G + V +M +
Sbjct: 516 LPMC--ASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR 573
Query: 427 PDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPEN--PATYVTMANIYA 474
D W ++ ++G ++A E ++E P + V +A IYA
Sbjct: 574 -DVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIYA 619
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 212/435 (48%), Gaps = 41/435 (9%)
Query: 42 LEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQE-RDVCSYNTMIS 100
L E +++H+ + S G F S L+D Y+ + + ++F + ++V +N++I
Sbjct: 20 LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIR 79
Query: 101 GFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVS-NK 159
F+K G LF E AL+ Y ++ E+ VS +K
Sbjct: 80 AFSKNG-------LFPE------------------------ALEFYGKLR--ESKVSPDK 106
Query: 160 FTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDK 219
+T SV+ A + + +G ++ I+ GF+SD V +AL DMY + G + ARQ+FD+
Sbjct: 107 YTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDE 166
Query: 220 MVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELG 279
M RD+VSW ++I Y G EE ++ EL S I P++FT + VL A + + G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Query: 280 KQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQN 339
+ +HG+ + G + + LV MY K ++++VF+ M D VS+ ++I GY +
Sbjct: 227 QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKL 286
Query: 340 GMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGL-QYFHSIKEKHGLTYTAD 398
M ++++ F L +PD + VL AC H L D L +Y ++ K G +
Sbjct: 287 EMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGH--LRDLSLAKYIYNYMLKAGFVLEST 343
Query: 399 HYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEI 458
++D+ A+ G A DV + M K D W S++ G G+L A + + + +
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIM 402
Query: 459 EPE-NPATYVTMANI 472
E + + TY+ + ++
Sbjct: 403 EEQADHITYLMLISV 417
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 135/276 (48%), Gaps = 6/276 (2%)
Query: 152 FENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSIN 211
+ VS+ F +S LS+ S + LR IH ++ G DS + L D Y
Sbjct: 1 MQTRVSSPF-ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPA 56
Query: 212 EARQIFDKMVD-RDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNAC 270
+ +F ++ ++V W ++I + + G E + +L +S + P+ +TF V+ AC
Sbjct: 57 SSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC 116
Query: 271 ADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWT 330
A E+G V+ + +G++ F +ALV MYS+ G + +++VF+ MP DLVSW
Sbjct: 117 AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWN 176
Query: 331 SLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEK 390
SLI+GY+ +G ++ALE + L S PD VL A + +V +G Q H K
Sbjct: 177 SLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG-QGLHGFALK 235
Query: 391 HGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMK 426
G+ +V + + R +A V +M ++
Sbjct: 236 SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR 271
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 264/462 (57%), Gaps = 34/462 (7%)
Query: 16 QILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCG 75
+++ Q + P+ SS+++ CR + L G VH + G + +++ N +++MYA C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 76 NISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVR 135
+A L +F ++ +++ +WT +I+G+
Sbjct: 161 VTMEAACL------------------------------IFRDIKVKNDVTWTTLITGFTH 190
Query: 136 YNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEV 195
I L +Y+ M EN+ + ++ + A ++I + GK+IH +++ GF S+
Sbjct: 191 LGDGIGGLKMYKQML-LENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLP 249
Query: 196 VWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSG 255
V +++ D+Y +CG ++EA+ F +M D+D+++W +I + E +F G
Sbjct: 250 VMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRFESQG 308
Query: 256 IRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSK 315
PN +TF ++ ACA+ AA G+Q+HG + R G++ A+AL+ MY+KCGN+ +S+
Sbjct: 309 FVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQ 368
Query: 316 KVFNGM-PRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHA 374
+VF + R +LVSWTS++ GY +G +A+E F+ ++ SG +PD IVF+ VL+AC HA
Sbjct: 369 RVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHA 428
Query: 375 GLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWAS 434
GLV+KGL+YF+ ++ ++G+ D Y C+VDLL R+G+ EA +++ +MP KPD+ W +
Sbjct: 429 GLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGA 488
Query: 435 LLGGCRIHGNLDLAKR-AAEALFEIEPENPATYVTMANIYAS 475
+LG C+ H + L R AA + E++P+ TYV ++ IYA+
Sbjct: 489 ILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAA 530
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 189/394 (47%), Gaps = 10/394 (2%)
Query: 53 KSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQERD--VCSYNTMISGFTKGGSLEQ 110
+S+ FKP I N + G S T + + + + + N ++S F KG +E+
Sbjct: 8 RSNAFKP---IPNFVRSSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKG-LVEE 63
Query: 111 ARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVS 170
AR+LFDEMP RD +WTAMI+GY N A + + M + + N+FTLSSVL +
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK-QGTSPNEFTLSSVLKSCR 122
Query: 171 AIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEAR-QIFDKMVDRDVVSWT 229
++ L G +HG +++ G + V +A+ +MY C EA IF + ++ V+WT
Sbjct: 123 NMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWT 182
Query: 230 AMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRI 289
+I + G G ++ +++ + + A A + GKQ+H + +
Sbjct: 183 TLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKR 242
Query: 290 GYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYF 349
G+ ++++ +Y +CG + +K F+ M DL++W +LI+ ++ +AL F
Sbjct: 243 GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMF 301
Query: 350 ELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLAR 409
+ G P+ F ++ AC + ++ G Q H + G + ++D+ A+
Sbjct: 302 QRFESQGFVPNCYTFTSLVAACANIAALNCG-QQLHGRIFRRGFNKNVELANALIDMYAK 360
Query: 410 SGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHG 443
G +++ V ++ + + W S++ G HG
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 175/339 (51%), Gaps = 43/339 (12%)
Query: 11 LKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDM 70
LK Q+L + + +P + ++ ++ GK++H+ + GF+ + + N +LD+
Sbjct: 198 LKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDL 257
Query: 71 YAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMI 130
Y +CG +S+A+ F EM+++D+ ++NT+IS + S E A++
Sbjct: 258 YCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE------------------ALL 299
Query: 131 SGYVRYNQPIEALDLYRMMQNFENS--VSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRT 188
M Q FE+ V N +T +S+++A + I L G+++HG I R
Sbjct: 300 -----------------MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 189 GFDSDEVVWSALSDMYGKCGSINEARQIFDKMVD-RDVVSWTAMIGRYFQEGRREEGFAL 247
GF+ + + +AL DMY KCG+I +++++F ++VD R++VSWT+M+ Y G E L
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 248 FSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYM-TRIGYDPYSFAASALVHMYS 306
F +++ SGIRP+ F VL+AC E G + M + G +P + +V +
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 307 KCGNVENSKKVFNGMP-RPDLVSWTSLIA---GYAQNGM 341
+ G + + ++ MP +PD +W +++ + NG+
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGL 501
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 296 bits (757), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 260/471 (55%), Gaps = 43/471 (9%)
Query: 16 QILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCG 75
++L + P + +++ C R ++ G VH + +GF+ +++S CLL MY CG
Sbjct: 97 EMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCG 156
Query: 76 NISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVR 135
++ +F+++PQ + +W ++ISG+V
Sbjct: 157 EVN-------------------------------YGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 136 YNQPIEALDLYRMMQNFENSV-SNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDS-- 192
N+ +A++ +R MQ+ N V +N+ + +L A + + GK HG++ GFD
Sbjct: 186 NNRFSDAIEAFREMQS--NGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYF 243
Query: 193 ------DEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFA 246
+ ++ ++L DMY KCG + AR +FD M +R +VSW ++I Y Q G EE
Sbjct: 244 QSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALC 303
Query: 247 LFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYS 306
+F +++ GI P+ TF V+ A +LG+ +H Y+++ G+ + ALV+MY+
Sbjct: 304 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 363
Query: 307 KCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGT-QPDHIVFV 365
K G+ E++KK F + + D ++WT +I G A +G ++AL F+ + + G PD I ++
Sbjct: 364 KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYL 423
Query: 366 GVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPM 425
GVL AC+H GLV++G +YF +++ HGL T +HY C+VD+L+R+GRF EAE ++ MP+
Sbjct: 424 GVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPV 483
Query: 426 KPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
KP+ +W +LL GC IH NL+L R + E E YV ++NIYA A
Sbjct: 484 KPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKA 534
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 186/378 (49%), Gaps = 11/378 (2%)
Query: 107 SLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVL 166
+L AR++F+ + + W +MI GY P +AL Y+ M + + FT VL
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLR-KGYSPDYFTFPYVL 114
Query: 167 SAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVV 226
A S ++ ++ G +HG++++TGF+ + V + L MY CG +N ++F+ + +VV
Sbjct: 115 KACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVV 174
Query: 227 SWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYM 286
+W ++I + R + F E+ +G++ N +L AC GK HG++
Sbjct: 175 AWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL 234
Query: 287 TRIGYDPY--------SFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQ 338
+G+DPY A++L+ MY+KCG++ ++ +F+GMP LVSW S+I GY+Q
Sbjct: 235 QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQ 294
Query: 339 NGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTAD 398
NG ++AL F +L G PD + F+ V+ A G G Q H+ K G A
Sbjct: 295 NGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG-QSIHAYVSKTGFVKDAA 353
Query: 399 HYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEI 458
+V++ A++G A+ + K D W ++ G HG+ + A + + E
Sbjct: 354 IVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEK 412
Query: 459 EPENPATYVTMANIYASA 476
P + +YA +
Sbjct: 413 GNATPDGITYLGVLYACS 430
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 140/295 (47%), Gaps = 13/295 (4%)
Query: 165 VLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCG---SINEARQIFDKMV 221
+LS + + L ++HG ++++ + + S L D C +++ AR +F+ +
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESID 68
Query: 222 DRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQ 281
V W +MI Y ++ + E+++ G P+ FTF VL AC+ + G
Sbjct: 69 CPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 282 VHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGM 341
VHG++ + G++ + ++ L+HMY CG V +VF +P+ ++V+W SLI+G+ N
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 342 PDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHG--------L 393
A+E F + +G + + + V +L AC + G ++FH + G +
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDPYFQSKV 247
Query: 394 TYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLA 448
+ ++D+ A+ G A + MP + W S++ G +G+ + A
Sbjct: 248 GFNVILATSLIDMYAKCGDLRTARYLFDGMPERT-LVSWNSIITGYSQNGDAEEA 301
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 294 bits (753), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 262/503 (52%), Gaps = 36/503 (7%)
Query: 4 ILCNQRRLKEALQILHQISHPSPSI----------YSSLI----------QFCRQNRAL- 42
I NQ R +A +LH + P+ I YSS + F R L
Sbjct: 48 ISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLT 107
Query: 43 ------EEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNI----SDAQTLFDEMQERDV 92
E ++ +K SG KP F N + AK I S +LF ERDV
Sbjct: 108 NTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDV 167
Query: 93 CSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNF 152
+++I + K G + AR LFDE+ +RD SW +MISGY +A+DL+R M+
Sbjct: 168 HINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE- 226
Query: 153 ENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINE 212
E ++ TL S+L A S + LR G+ + + + S L MYGKCG ++
Sbjct: 227 EGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDS 286
Query: 213 ARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACAD 272
AR++F++M+ +D V+WTAMI Y Q G+ E F LF E+ K+G+ P+A T + VL+AC
Sbjct: 287 ARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGS 346
Query: 273 HAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSL 332
A ELGKQ+ + + + + A+ LV MY KCG VE + +VF MP + +W ++
Sbjct: 347 VGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAM 406
Query: 333 IAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHG 392
I YA G +AL F+ + P I F+GVL+AC HAGLV +G +YFH + G
Sbjct: 407 ITAYAHQGHAKEALLLFD---RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFG 463
Query: 393 LTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAA 452
L +HY I+DLL+R+G EA + + + P KPD+ + A++LG C ++ + ++A
Sbjct: 464 LVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAM 523
Query: 453 EALFEI-EPENPATYVTMANIYA 474
L E+ E +N YV +N+ A
Sbjct: 524 RMLMEMKEAKNAGNYVISSNVLA 546
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 209/430 (48%), Gaps = 31/430 (7%)
Query: 14 ALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAK 73
+LQ+L + + SIY +F + R EE ++ + L + K
Sbjct: 2 SLQMLIKPEKLAFSIYRQFPKF--KPRQFEEARRGD-------------LERDFLFLLKK 46
Query: 74 CGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGY 133
C +++ + + +M V N +I + G + LF + +++S+ MI G
Sbjct: 47 CISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGL 106
Query: 134 VR-YNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDS 192
+N AL LYR M+ F +KFT + V A + ++ + +G+ +H + + G +
Sbjct: 107 TNTWNDHEAALSLYRRMK-FSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLER 165
Query: 193 DEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELI 252
D + +L MY KCG + AR++FD++ +RD VSW +MI Y + G ++ LF ++
Sbjct: 166 DVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKME 225
Query: 253 KSGIRPNAFTFAGVLNACADHAAEELGKQVH--GYMTRIGYDPYSFAASALVHMYSKCGN 310
+ G P+ T +L AC+ G+ + +IG +F S L+ MY KCG+
Sbjct: 226 EEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS--TFLGSKLISMYGKCGD 283
Query: 311 VENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTA 370
++++++VFN M + D V+WT++I Y+QNG +A + F + K+G PD VL+A
Sbjct: 284 LDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSA 343
Query: 371 CTHAGLVDKGLQYFHSIKEKHGLTYTADH----YACIVDLLARSGRFHEAEDVISKMPMK 426
C G ++ G Q E H + H +VD+ + GR EA V MP+K
Sbjct: 344 CGSVGALELGKQI-----ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK 398
Query: 427 PDKFLWASLL 436
++ W +++
Sbjct: 399 -NEATWNAMI 407
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 246/417 (58%), Gaps = 13/417 (3%)
Query: 67 LLDMYAKCGNISDAQTLFDEM----QERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRD 122
+L + A+ G + +A+ ++ E DV N +I+ ++K G +E AR +FD M +R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 123 NFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAV----SAIQCLRLG 178
SW MI Y R EALD++ M+N E ++FT+SSVLSA A++C
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRN-EGFKFSEFTISSVLSACGVNCDALEC---- 181
Query: 179 KEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQE 238
K++H ++T D + V +AL D+Y KCG I +A Q+F+ M D+ V+W++M+ Y Q
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 239 GRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAA 298
EE L+ + + N FT + V+ AC++ AA GKQ+H + + G+ F A
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 299 SALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQ 358
S+ V MY+KCG++ S +F+ + +L W ++I+G+A++ P + + FE + + G
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 359 PDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAED 418
P+ + F +L+ C H GLV++G ++F ++ +GL+ HY+C+VD+L R+G EA +
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 419 VISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
+I +P P +W SLL CR++ NL+LA+ AAE LFE+EPEN +V ++NIYA+
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA 478
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 160/327 (48%), Gaps = 9/327 (2%)
Query: 118 MPQRDNFS-WTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLR 176
+P+R N S + IS Y+Q E + R + N SN+ + +L + +
Sbjct: 25 LPRRSNTSSLSRNISVLASYDQ--EEVSPGR----YSNEFSNRNLVHEILQLCARNGAVM 78
Query: 177 LGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYF 236
K HG I+R + D + + L + Y KCG + ARQ+FD M++R +VSW MIG Y
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 138
Query: 237 QEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSF 296
+ E +F E+ G + + FT + VL+AC + K++H + D +
Sbjct: 139 RNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLY 198
Query: 297 AASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSG 356
+AL+ +Y+KCG ++++ +VF M V+W+S++AGY QN ++AL + +
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS 258
Query: 357 TQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEA 416
+ + V+ AC++ + +G Q H++ K G + VD+ A+ G E+
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 417 EDVISKMPMKPDKFLWASLLGGCRIHG 443
+ S++ K + LW +++ G H
Sbjct: 318 YIIFSEVQEKNLE-LWNTIISGFAKHA 343
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 160/339 (47%), Gaps = 38/339 (11%)
Query: 2 IDILCNQRRLKEALQILHQISHP----SPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGF 57
I + R EAL I ++ + S SS++ C N E KK+H +
Sbjct: 134 IGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCI 193
Query: 58 KPGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDE 117
+++ LLD+YAKCG I DA +F+ MQ++ ++++M++G+ + + E
Sbjct: 194 DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE-------- 245
Query: 118 MPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRL 177
EAL LYR Q N+FTLSSV+ A S + L
Sbjct: 246 -----------------------EALLLYRRAQRMSLE-QNQFTLSSVICACSNLAALIE 281
Query: 178 GKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQ 237
GK++H I ++GF S+ V S+ DMY KCGS+ E+ IF ++ ++++ W +I + +
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 238 EGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYM-TRIGYDPYSF 296
R +E LF ++ + G+ PN TF+ +L+ C E G++ M T G P
Sbjct: 342 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVV 401
Query: 297 AASALVHMYSKCGNVENSKKVFNGMP-RPDLVSWTSLIA 334
S +V + + G + + ++ +P P W SL+A
Sbjct: 402 HYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 292 bits (748), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 252/453 (55%), Gaps = 36/453 (7%)
Query: 25 SPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLF 84
S S ++S+I+ C + L +++H + GF I L+ Y+KC + DA LF
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353
Query: 85 DEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALD 144
E+ C N + SWTAMISG+++ + EA+D
Sbjct: 354 KEIG----CVGNVV--------------------------SWTAMISGFLQNDGKEEAVD 383
Query: 145 LYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMY 204
L+ M+ + N+FT S +L+A+ I E+H +++T ++ V +AL D Y
Sbjct: 384 LFSEMKR-KGVRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAY 438
Query: 205 GKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFA 264
K G + EA ++F + D+D+V+W+AM+ Y Q G E +F EL K GI+PN FTF+
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFS 498
Query: 265 GVLNACA-DHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPR 323
+LN CA +A+ GKQ HG+ + D +SAL+ MY+K GN+E++++VF
Sbjct: 499 SILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 324 PDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQY 383
DLVSW S+I+GYAQ+G KAL+ F+ + K + D + F+GV ACTHAGLV++G +Y
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 384 FHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHG 443
F + + T +H +C+VDL +R+G+ +A VI MP +W ++L CR+H
Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHK 678
Query: 444 NLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
+L + AAE + ++PE+ A YV ++N+YA +
Sbjct: 679 KTELGRLAAEKIIAMKPEDSAAYVLLSNMYAES 711
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 217/453 (47%), Gaps = 42/453 (9%)
Query: 27 SIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDE 86
SI+SS+++ G+++H GF V + L+D Y K N D + +FDE
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 87 MQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLY 146
M+ER+V ++ T+ISG+ ARN ++ E L L+
Sbjct: 154 MKERNVVTWTTLISGY--------ARNSMND-----------------------EVLTLF 182
Query: 147 RMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGK 206
MQN E + N FT ++ L ++ G ++H +++ G D V ++L ++Y K
Sbjct: 183 MRMQN-EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK 241
Query: 207 CGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGV 266
CG++ +AR +FDK + VV+W +MI Y G E +F + + +R + +FA V
Sbjct: 242 CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 267 LNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMP-RPD 325
+ CA+ +Q+H + + G+ +AL+ YSKC + ++ ++F + +
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 326 LVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFH 385
+VSWT++I+G+ QN ++A++ F + + G +P+ + +LTA + Q
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVK 421
Query: 386 SIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNL 445
+ E+ TA ++D + G+ EA V S + K D W+++L G G
Sbjct: 422 TNYERSSTVGTA-----LLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGET 475
Query: 446 DLAKRAAEALFE--IEPENPATYVTMANIYASA 476
+ A + L + I+P N T+ ++ N+ A+
Sbjct: 476 EAAIKMFGELTKGGIKP-NEFTFSSILNVCAAT 507
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 178/376 (47%), Gaps = 47/376 (12%)
Query: 101 GFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEA----LDLYRMMQNFENSV 156
G L A NLFD+ P RD S+ +++ G+ R + EA L+++R+ + S+
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 157 SNKFTLSSVLSAVSAIQCLRL-GKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQ 215
SSVL VSA C L G+++H ++ GF D V ++L D Y K + + R+
Sbjct: 96 -----FSSVLK-VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 216 IFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAA 275
+FD+M +R+VV+WT +I Y + +E LF + G +PN+FTFA L A+
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 276 EELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAG 335
G QVH + + G D +++L+++Y KCGNV ++ +F+ +V+W S+I+G
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 336 YAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACT-----------HAGLVDKGLQYF 384
YA NG+ +AL F + + + F V+ C H +V G +
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 385 HSIKEKHGLTYT---------------------ADHYACIVDLLARSGRFHEAEDVISKM 423
+I+ + Y+ A I L G+ EA D+ S+M
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK-EEAVDLFSEM 388
Query: 424 PMK---PDKFLWASLL 436
K P++F ++ +L
Sbjct: 389 KRKGVRPNEFTYSVIL 404
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 24 PSPSIYSSLIQFCR-QNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQT 82
P+ +SS++ C N ++ +GK+ H S + +S+ LL MYAK GNI A+
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
Query: 83 LFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQR 121
+F +E+D+ S+N+MISG+ + G +A ++F EM +R
Sbjct: 552 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 292 bits (747), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 247/453 (54%), Gaps = 32/453 (7%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
PS S++ R + GK++H + SGF V IS L+DMYAKCG
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG-------- 285
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
SLE AR LFD M +R+ SW +MI YV+ P EA+
Sbjct: 286 -----------------------SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAM 322
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
+++ M + E ++ L A + + L G+ IH + G D + V ++L M
Sbjct: 323 LIFQKMLD-EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 381
Query: 204 YGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTF 263
Y KC ++ A +F K+ R +VSW AMI + Q GR + FS++ ++P+ FT+
Sbjct: 382 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
Query: 264 AGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPR 323
V+ A A+ + K +HG + R D F +ALV MY+KCG + ++ +F+ M
Sbjct: 442 VSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 501
Query: 324 PDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQY 383
+ +W ++I GY +G ALE FE + K +P+ + F+ V++AC+H+GLV+ GL+
Sbjct: 502 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC 561
Query: 384 FHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHG 443
F+ +KE + + + DHY +VDLL R+GR +EA D I +MP+KP ++ ++LG C+IH
Sbjct: 562 FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK 621
Query: 444 NLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
N++ A++AAE LFE+ P++ +V +ANIY +A
Sbjct: 622 NVNFAEKAAERLFELNPDDGGYHVLLANIYRAA 654
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 225/451 (49%), Gaps = 42/451 (9%)
Query: 11 LKEALQILHQISHP--SPSIY--SSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNC 66
L +ALQ ++ + P +Y + L++ C L GK++H L SGF +F
Sbjct: 116 LDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG 175
Query: 67 LLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSW 126
L +MYAKC ++ +AR +FD MP+RD SW
Sbjct: 176 LENMYAKCRQVN-------------------------------EARKVFDRMPERDLVSW 204
Query: 127 TAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIM 186
+++GY + AL++ + M EN + T+ SVL AVSA++ + +GKEIHGY M
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCE-ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263
Query: 187 RTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFA 246
R+GFDS + +AL DMY KCGS+ ARQ+FD M++R+VVSW +MI Y Q +E
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 247 LFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYS 306
+F +++ G++P + G L+ACAD E G+ +H +G D ++L+ MY
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYC 383
Query: 307 KCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVG 366
KC V+ + +F + LVSW ++I G+AQNG P AL YF + +PD +V
Sbjct: 384 KCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 367 VLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMK 426
V+TA + ++ H + + L +VD+ A+ G A +I M +
Sbjct: 444 VITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR-LIFDMMSE 501
Query: 427 PDKFLWASLLGGCRIHGNLDLAKRAAEALFE 457
W +++ G HG +AA LFE
Sbjct: 502 RHVTTWNAMIDGYGTHG----FGKAALELFE 528
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 135/272 (49%), Gaps = 5/272 (1%)
Query: 165 VLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRD 224
+L S+++ LR +I + + G + + L ++ + GS++EA ++F+ + +
Sbjct: 43 LLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 225 VVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHG 284
V + M+ + + ++ F + + P + F +L C D A +GK++HG
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 285 YMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDK 344
+ + G+ FA + L +MY+KC V ++KVF+ MP DLVSW +++AGY+QNGM
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 345 ALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIV 404
ALE + + + +P I V VL A + L+ G + H + G + +V
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG-KEIHGYAMRSGFDSLVNISTALV 278
Query: 405 DLLARSGRFHEAEDVISKMPMKPDKFLWASLL 436
D+ A+ G A + M ++ + W S++
Sbjct: 279 DMYAKCGSLETARQLFDGM-LERNVVSWNSMI 309
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/381 (38%), Positives = 227/381 (59%), Gaps = 3/381 (0%)
Query: 96 NTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENS 155
N +++ ++K SL +A +FD R++ +W+AM++GY + + +EA+ L+ M F
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM--FSAG 317
Query: 156 VS-NKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEAR 214
+ +++T+ VL+A S I L GK++H ++++ GF+ +AL DMY K G + +AR
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377
Query: 215 QIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHA 274
+ FD + +RDV WT++I Y Q EE L+ + +GI PN T A VL AC+ A
Sbjct: 378 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLA 437
Query: 275 AEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIA 334
ELGKQVHG+ + G+ SAL MYSKCG++E+ VF P D+VSW ++I+
Sbjct: 438 TLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMIS 497
Query: 335 GYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLT 394
G + NG D+ALE FE +L G +PD + FV +++AC+H G V++G YF+ + ++ GL
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLD 557
Query: 395 YTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEA 454
DHYAC+VDLL+R+G+ EA++ I + LW LL C+ HG +L A E
Sbjct: 558 PKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEK 617
Query: 455 LFEIEPENPATYVTMANIYAS 475
L + +TYV ++ IY +
Sbjct: 618 LMALGSRESSTYVQLSGIYTA 638
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/514 (27%), Positives = 241/514 (46%), Gaps = 82/514 (15%)
Query: 38 QNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKC----------------------- 74
Q R L G+ VH + +G + +N L++ YAKC
Sbjct: 26 QQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNS 85
Query: 75 --------GNISDAQT---LFDEMQERDVCSYNTMISG---------------------- 101
G IS + T LF EM+ +D+ ++G
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV 145
Query: 102 -----------------FTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALD 144
+ K G +E +F MP+R+ ++W+ M+SGY + EA+
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 145 LYRM-MQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
++ + ++ E + + ++VLS+++A + LG++IH ++ G + +AL M
Sbjct: 206 VFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTM 265
Query: 204 YGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTF 263
Y KC S+NEA ++FD DR+ ++W+AM+ Y Q G E LFS + +GI+P+ +T
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTI 325
Query: 264 AGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPR 323
GVLNAC+D E GKQ+H ++ ++G++ + FA +ALV MY+K G + +++K F+ +
Sbjct: 326 VGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 324 PDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQY 383
D+ WTSLI+GY QN ++AL + + +G P+ VL AC+ ++ G Q
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ- 444
Query: 384 FHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHG 443
H KHG + + + ++ G + V + P K D W +++ G +G
Sbjct: 445 VHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK-DVVSWNAMISGLSHNG 503
Query: 444 NLDLAKRAAEALFE--IEPENPATYVTMANIYAS 475
D A E + +EP++ VT NI ++
Sbjct: 504 QGDEALELFEEMLAEGMEPDD----VTFVNIISA 533
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 182/399 (45%), Gaps = 71/399 (17%)
Query: 11 LKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPG---------- 60
L EA ++ + +S+++ QN E K+ S + S+G KP
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331
Query: 61 -------------------------VFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSY 95
+F + L+DMYAK G ++DA+ FD +QERDV +
Sbjct: 332 CSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALW 391
Query: 96 NTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENS 155
++IS GYV+ + EAL LYR M+
Sbjct: 392 TSLIS-------------------------------GYVQNSDNEEALILYRRMKT-AGI 419
Query: 156 VSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQ 215
+ N T++SVL A S++ L LGK++HG+ ++ GF + + SALS MY KCGS+ +
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479
Query: 216 IFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAA 275
+F + ++DVVSW AMI G+ +E LF E++ G+ P+ TF +++AC+
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGF 539
Query: 276 EELGKQVHGYMT-RIGYDPYSFAASALVHMYSKCGNVENSKK-VFNGMPRPDLVSWTSLI 333
E G M+ +IG DP + +V + S+ G ++ +K+ + + L W L+
Sbjct: 540 VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILL 599
Query: 334 AGYAQNGMPDKALEYFELLLKSGTQPD--HIVFVGVLTA 370
+ +G + + E L+ G++ ++ G+ TA
Sbjct: 600 SACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTA 638
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 127/239 (53%), Gaps = 8/239 (3%)
Query: 161 TLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKM 220
TL L+ S + L G+ +HG I+RTG + + L + Y KCG + +A IF+ +
Sbjct: 16 TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75
Query: 221 VDRDVVSWTAMIGRYFQEGRREEGFA---LFSELIKSGIRPNAFTFAGVLNACADHAAEE 277
+ +DVVSW ++I Y Q G + LF E+ I PNA+T AG+ A + +
Sbjct: 76 ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSST 135
Query: 278 LGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYA 337
+G+Q H + ++ + ++LV MY K G VE+ KVF MP + +W+++++GYA
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195
Query: 338 QNGMPDKALEYFELLLK---SGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGL 393
G ++A++ F L L+ G+ D+ VF VL++ V G Q H I K+GL
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDY-VFTAVLSSLAATIYVGLGRQ-IHCITIKNGL 252
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 9 RRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLL 68
RR+K A I P+ +S+++ C LE GK+VH H GF V I + L
Sbjct: 412 RRMKTAGII------PNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALS 465
Query: 69 DMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEM----PQRDNF 124
MY+KCG++ D +F +DV S+N MISG + G ++A LF+EM + D+
Sbjct: 466 TMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDV 525
Query: 125 SWTAMIS 131
++ +IS
Sbjct: 526 TFVNIIS 532
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 239/399 (59%), Gaps = 12/399 (3%)
Query: 79 DAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQ 138
+A LFDE+ E D SYN M+S + + + E+A++ FD MP +D SW MI+GY R +
Sbjct: 111 EAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGE 170
Query: 139 PIEALDL-YRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVW 197
+A +L Y MM+ N+ + ++++S I+C L K H + + V W
Sbjct: 171 MEKARELFYSMMEK------NEVSWNAMISGY--IECGDLEKASHFF--KVAPVRGVVAW 220
Query: 198 SALSDMYGKCGSINEARQIFDKM-VDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGI 256
+A+ Y K + A +F M V++++V+W AMI Y + R E+G LF +++ GI
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 257 RPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKK 316
RPN+ + L C++ +A +LG+Q+H +++ A ++L+ MY KCG + ++ K
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 317 VFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGL 376
+F M + D+V+W ++I+GYAQ+G DKAL F ++ + +PD I FV VL AC HAGL
Sbjct: 341 LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400
Query: 377 VDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLL 436
V+ G+ YF S+ + + DHY C+VDLL R+G+ EA +I MP +P ++ +LL
Sbjct: 401 VNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLL 460
Query: 437 GGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
G CR+H N++LA+ AAE L ++ +N A YV +ANIYAS
Sbjct: 461 GACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYAS 499
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%)
Query: 11 LKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDM 70
LK +L + P+ S SS + C + AL+ G+++H + S V L+ M
Sbjct: 269 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISM 328
Query: 71 YAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEM 118
Y KCG + DA LF+ M+++DV ++N MISG+ + G+ ++A LF EM
Sbjct: 329 YCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 376
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 80/176 (45%), Gaps = 13/176 (7%)
Query: 285 YMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDK 344
Y+T+ F + ++ + G+++ + +VF+GM + ++W SL+ G +++ P +
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD--PSR 108
Query: 345 ALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIV 404
+E + L +PD + +L+ +K +F + K ++ ++
Sbjct: 109 MMEAHQ-LFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNT-----MI 162
Query: 405 DLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEP 460
AR G +A ++ M M+ ++ W +++ G G+L+ A F++ P
Sbjct: 163 TGYARRGEMEKARELFYSM-MEKNEVSWNAMISGYIECGDLE----KASHFFKVAP 213
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 259/471 (54%), Gaps = 40/471 (8%)
Query: 12 KEALQILHQISH--PSPSIY--SSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCL 67
KEA+++ +S P +Y SS++ C AL G +VH++ + +++N L
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSL 391
Query: 68 LDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWT 127
+DMYAKC ++DA R +FD D +
Sbjct: 392 IDMYAKCDCLTDA-------------------------------RKVFDIFAAADVVLFN 420
Query: 128 AMISGYVRYNQPIE---ALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGY 184
AMI GY R E AL+++R M+ F + T S+L A +++ L L K+IHG
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMR-FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 185 IMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEG 244
+ + G + D SAL D+Y C + ++R +FD+M +D+V W +M Y Q+ EE
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 245 FALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHM 304
LF EL S RP+ FTFA ++ A + A+ +LG++ H + + G + + +AL+ M
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 305 YSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVF 364
Y+KCG+ E++ K F+ D+V W S+I+ YA +G KAL+ E ++ G +P++I F
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Query: 365 VGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMP 424
VGVL+AC+HAGLV+ GL+ F + + G+ +HY C+V LL R+GR ++A ++I KMP
Sbjct: 660 VGVLSACSHAGLVEDGLKQFE-LMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 425 MKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
KP +W SLL GC GN++LA+ AAE +P++ ++ ++NIYAS
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 769
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 222/471 (47%), Gaps = 47/471 (9%)
Query: 14 ALQILHQISH----PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLD 69
+LQ+ +Q+ P I S+++ C LE GK++H+H+ G + + N L+D
Sbjct: 233 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID 292
Query: 70 MYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAM 129
Y KCG + A LF+ M +++ S+ T++SG+ K +L +
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGY-KQNALHK------------------- 332
Query: 130 ISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTG 189
EA++L+ M F + + SS+L++ +++ L G ++H Y ++
Sbjct: 333 -----------EAMELFTSMSKF-GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN 380
Query: 190 FDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRR---EEGFA 246
+D V ++L DMY KC + +AR++FD DVV + AMI Y + G + E
Sbjct: 381 LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALN 440
Query: 247 LFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYS 306
+F ++ IRP+ TF +L A A + L KQ+HG M + G + FA SAL+ +YS
Sbjct: 441 IFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYS 500
Query: 307 KCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVG 366
C +++S+ VF+ M DLV W S+ AGY Q ++AL F L S +PD F
Sbjct: 501 NCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFAN 560
Query: 367 VLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMK 426
++TA + V G Q FH K GL ++D+ A+ G +A +
Sbjct: 561 MVTAAGNLASVQLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR 619
Query: 427 PDKFLWASLLGGCRIHGNLDLAKRAAEALFE--IEPENPATYVTMANIYAS 475
D W S++ HG A + E + IEP Y+T + ++
Sbjct: 620 -DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP----NYITFVGVLSA 665
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 209/422 (49%), Gaps = 43/422 (10%)
Query: 24 PSPSIYSSLIQFCR--QNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQ 81
P+ I SS IQ C R ++ S L SGF V++ L+D Y
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY---------- 193
Query: 82 TLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIE 141
K G+++ AR +FD +P++ +WT MISG V+ +
Sbjct: 194 ---------------------LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYV 232
Query: 142 ALDL-YRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSAL 200
+L L Y++M+ +N V + + LS+VLSA S + L GK+IH +I+R G + D + + L
Sbjct: 233 SLQLFYQLME--DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVL 290
Query: 201 SDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNA 260
D Y KCG + A ++F+ M +++++SWT ++ Y Q +E LF+ + K G++P+
Sbjct: 291 IDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDM 350
Query: 261 FTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNG 320
+ + +L +CA A G QVH Y + S+ ++L+ MY+KC + +++KVF+
Sbjct: 351 YACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 321 MPRPDLVSWTSLIAGYAQNGMP---DKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLV 377
D+V + ++I GY++ G +AL F + +P + FV +L A A L
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA--SASLT 468
Query: 378 DKGL-QYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLL 436
GL + H + K+GL + ++D+ + ++ V +M +K D +W S+
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMF 527
Query: 437 GG 438
G
Sbjct: 528 AG 529
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 180/336 (53%), Gaps = 9/336 (2%)
Query: 89 ERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRM 148
E D N +I+ +++ G + AR +F++MP+R+ SW+ M+S + E+L ++
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 149 MQNFENSVSNKFTLSSVLSAVSAI--QCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGK 206
N++ LSS + A S + + + ++ +++++GFD D V + L D Y K
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 207 CGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGV 266
G+I+ AR +FD + ++ V+WT MI + GR LF +L++ + P+ + + V
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 267 LNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDL 326
L+AC+ E GKQ+H ++ R G + + + L+ Y KCG V + K+FNGMP ++
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 327 VSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQ-YFH 385
+SWT+L++GY QN + +A+E F + K G +PD +LT+C + G Q + +
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAY 375
Query: 386 SIKEKHGLTYTADHYAC--IVDLLARSGRFHEAEDV 419
+IK G D Y ++D+ A+ +A V
Sbjct: 376 TIKANLG----NDSYVTNSLIDMYAKCDCLTDARKV 407
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 165/341 (48%), Gaps = 37/341 (10%)
Query: 5 LCNQRRLKEALQILH----QISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPG 60
L Q L EAL I ++ PS + SL++ +L K++H + G
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD 488
Query: 61 VFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQ 120
+F + L+D+Y+ C + D++ +FDEM+ +D+ +N+M +G+ + E+A NLF E+
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL-- 546
Query: 121 RDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKE 180
++FT +++++A + ++LG+E
Sbjct: 547 ------------------------------QLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 181 IHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGR 240
H +++ G + + + +AL DMY KCGS +A + FD RDVV W ++I Y G
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 241 REEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASA 300
++ + +++ GI PN TF GVL+AC+ E G + M R G +P +
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVC 696
Query: 301 LVHMYSKCGNVENSKKVFNGMP-RPDLVSWTSLIAGYAQNG 340
+V + + G + ++++ MP +P + W SL++G A+ G
Sbjct: 697 MVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 737
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 134/261 (51%), Gaps = 5/261 (1%)
Query: 181 IHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGR 240
+HG I+ G + D + + L ++Y + G + AR++F+KM +R++VSW+ M+ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 241 REEGFALFSELIKS-GIRPNAFTFAGVLNACA--DHAAEELGKQVHGYMTRIGYDPYSFA 297
EE +F E ++ PN + + + AC+ D + Q+ ++ + G+D +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 298 ASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGT 357
+ L+ Y K GN++ ++ VF+ +P V+WT++I+G + G +L+ F L++
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 358 QPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAE 417
PD + VL+AC+ ++ G Q H+ ++GL A ++D + GR A
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQ-IHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 418 DVISKMPMKPDKFLWASLLGG 438
+ + MP K + W +LL G
Sbjct: 305 KLFNGMPNK-NIISWTTLLSG 324
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 33/237 (13%)
Query: 7 NQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNC 66
N+ L L++ P +++++ +++ G++ H L G + +I+N
Sbjct: 536 NEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNA 595
Query: 67 LLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSW 126
LLDMYAKCG+ DA FD RDV +N++IS + G ++A + ++M
Sbjct: 596 LLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM-------- 647
Query: 127 TAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIM 186
M + E N T VLSA S + G + ++
Sbjct: 648 ---------------------MSEGIE---PNYITFVGVLSACSHAGLVEDGLKQFELML 683
Query: 187 RTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRD-VVSWTAMIGRYFQEGRRE 242
R G + + + + + G+ G +N+AR++ +KM + + W +++ + G E
Sbjct: 684 RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Query: 282 VHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGM 341
VHG + G + ++ ++ L+++YS+ G + ++KVF MP +LVSW+++++ +G+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 342 PDKALEYF-ELLLKSGTQPDHIVFVGVLTACTHAGLVDKG---LQYFHSIKEKHGLTYTA 397
+++L F E P+ + + AC+ GL +G + S K G
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 398 DHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGC 439
++D + G A V +P K W +++ GC
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEK-STVTWTTMISGC 224
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 227/382 (59%), Gaps = 2/382 (0%)
Query: 96 NTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENS 155
N++ISG++ G + A LFD +D +WTAMI G+VR EA+ + M+
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKK-TGV 200
Query: 156 VSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTG-FDSDEVVWSALSDMYGKCGSINEAR 214
+N+ T+ SVL A ++ +R G+ +HG + TG D + S+L DMYGKC ++A+
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQ 260
Query: 215 QIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHA 274
++FD+M R+VV+WTA+I Y Q ++G +F E++KS + PN T + VL+ACA
Sbjct: 261 KVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVG 320
Query: 275 AEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIA 334
A G++VH YM + + + A + L+ +Y KCG +E + VF + ++ +WT++I
Sbjct: 321 ALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 335 GYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLT 394
G+A +G A + F +L S P+ + F+ VL+AC H GLV++G + F S+K + +
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNME 440
Query: 395 YTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEA 454
ADHYAC+VDL R G EA+ +I +MPM+P +W +L G C +H + +L K AA
Sbjct: 441 PKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASR 500
Query: 455 LFEIEPENPATYVTMANIYASA 476
+ +++P + Y +AN+Y+ +
Sbjct: 501 VIKLQPSHSGRYTLLANLYSES 522
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 165/345 (47%), Gaps = 9/345 (2%)
Query: 103 TKGGSLEQARNLFDEMPQRDNFSWTAMI---SGYVRYNQPIEALDLYRMMQNFENSVSNK 159
T AR L ++ W ++I SG + N+ + L M +N + ++
Sbjct: 47 TAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRN--GVIPSR 104
Query: 160 FTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDK 219
T +L AV ++ + H +I++ G DSD V ++L Y G + A ++FD
Sbjct: 105 HTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDG 163
Query: 220 MVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELG 279
D+DVV+WTAMI + + G E F E+ K+G+ N T VL A G
Sbjct: 164 AEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFG 223
Query: 280 KQVHGYMTRIGYDPYS-FAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQ 338
+ VHG G F S+LV MY KC ++++KVF+ MP ++V+WT+LIAGY Q
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 339 NGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTAD 398
+ DK + FE +LKS P+ VL+AC H G + +G + H K+ +
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRG-RRVHCYMIKNSIEINTT 342
Query: 399 HYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHG 443
++DL + G EA V ++ K + + W +++ G HG
Sbjct: 343 AGTTLIDLYVKCGCLEEAILVFERLHEK-NVYTWTAMINGFAAHG 386
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 146/293 (49%), Gaps = 35/293 (11%)
Query: 45 GKKVHS-HLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFT 103
G+ VH +L++ K VFI + L+DMY KC DAQ +FDEM R+V ++ +I+G+
Sbjct: 223 GRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYV 282
Query: 104 KGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLS 163
+ ++ +F+EM + D N+ TLS
Sbjct: 283 QSRCFDKGMLVFEEMLKSD--------------------------------VAPNEKTLS 310
Query: 164 SVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDR 223
SVLSA + + L G+ +H Y+++ + + + L D+Y KCG + EA +F+++ ++
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 224 DVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVH 283
+V +WTAMI + G + F LF ++ S + PN TF VL+ACA E G+++
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 284 GYMT-RIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMP-RPDLVSWTSLIA 334
M R +P + + +V ++ + G +E +K + MP P V W +L
Sbjct: 431 LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 36/233 (15%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P+ SS++ C AL G++VH ++ + + L+D+Y KCG + +A +
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
F+ + E++V ++ MI+GF G A +LF M+S +V
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLF-----------YTMLSSHVS-------- 404
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVV--WSALS 201
N+ T +VLSA + + G+ + M+ F+ + ++ +
Sbjct: 405 -------------PNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEPKADHYACMV 450
Query: 202 DMYGKCGSINEARQIFDKM-VDRDVVSWTAMIGRYFQEGRREEGFALFSELIK 253
D++G+ G + EA+ + ++M ++ V W A+ G E G S +IK
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIK 503
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 289 bits (740), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 258/481 (53%), Gaps = 64/481 (13%)
Query: 29 YSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEMQ 88
Y +Q C +NR L K +H+H+ G ++N L+++Y KC
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKC-------------- 51
Query: 89 ERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRM 148
G+ A +FDEMP RD+ +W ++++ + N + L ++
Sbjct: 52 -----------------GAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSS 94
Query: 149 MQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCG 208
+ + + F S+++ A + + + G+++H + + + + +DEVV S+L DMY KCG
Sbjct: 95 VGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCG 154
Query: 209 SINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALF---------------SELIK 253
+N A+ +FD + ++ +SWTAM+ Y + GR+EE LF S ++
Sbjct: 155 LLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQ 214
Query: 254 SGIRPNAFT-----------------FAGVLNACADHAAEELGKQVHGYMTRIGYDPYSF 296
SG AF+ + ++ ACA+ AA G+QVHG + +G+D F
Sbjct: 215 SGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVF 274
Query: 297 AASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSG 356
++AL+ MY+KC +V +K +F+ M D+VSWTSLI G AQ+G +KAL ++ ++ G
Sbjct: 275 ISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 334
Query: 357 TQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEA 416
+P+ + FVG++ AC+H G V+KG + F S+ + +G+ + HY C++DLL RSG EA
Sbjct: 335 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 394
Query: 417 EDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALF-EIEPENPATYVTMANIYAS 475
E++I MP PD+ WA+LL C+ G + R A+ L + ++P+TY+ ++NIYAS
Sbjct: 395 ENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYAS 454
Query: 476 A 476
A
Sbjct: 455 A 455
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 194/344 (56%), Gaps = 2/344 (0%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P ++S+L++ C +++ G++VH H S + + + L+DMYAKCG ++ A+ +
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
FD ++ ++ S+ M+SG+ K G E+A LF +P ++ +SWTA+ISG+V+ + +EA
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
++ M+ + + LSS++ A + + G+++HG ++ GFDS + +AL DM
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDM 282
Query: 204 YGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTF 263
Y KC + A+ IF +M RDVVSWT++I Q G+ E+ AL+ +++ G++PN TF
Sbjct: 283 YAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTF 342
Query: 264 AGVLNACADHAAEELGKQVHGYMTR-IGYDPYSFAASALVHMYSKCGNVENSKKVFNGMP 322
G++ AC+ E G+++ MT+ G P + L+ + + G ++ ++ + + MP
Sbjct: 343 VGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP 402
Query: 323 -RPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFV 365
PD +W +L++ + G + + L+ S D ++
Sbjct: 403 FPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYI 446
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 6/140 (4%)
Query: 2 IDILCNQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGV 61
ID+ + A I ++ H ++SLI Q+ E+ ++ + S G KP
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339
Query: 62 FISNCLLDMYAKCGNISDAQTLFDEMQER-----DVCSYNTMISGFTKGGSLEQARNLFD 116
L+ + G + + LF M + + Y ++ + G L++A NL
Sbjct: 340 VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 399
Query: 117 EMP-QRDNFSWTAMISGYVR 135
MP D +W A++S R
Sbjct: 400 TMPFPPDEPTWAALLSACKR 419
>sp|Q9FK33|PP427_ARATH Pentatricopeptide repeat-containing protein At5g50390,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2
SV=1
Length = 701
Score = 289 bits (739), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 258/477 (54%), Gaps = 39/477 (8%)
Query: 4 ILCNQRRLKEALQILHQIS-----HPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFK 58
+LCN R +EA ++ + S Y +L++ C + +++ K+V+ + S+GF+
Sbjct: 98 VLCN--RFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFE 155
Query: 59 PGVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEM 118
P ++ N +L M+ KCG I DA R LFDE+
Sbjct: 156 PEQYMMNRILLMHVKCGMIIDA-------------------------------RRLFDEI 184
Query: 119 PQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLG 178
P+R+ +S+ ++ISG+V + +EA +L++MM E S T + +L A + + + +G
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWE-ELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 179 KEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQE 238
K++H ++ G + V L DMY KCG I +AR F+ M ++ V+W +I Y
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 239 GRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAA 298
G EE L ++ SG+ + FT + ++ A EL KQ H + R G++ A
Sbjct: 304 GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVAN 363
Query: 299 SALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQ 358
+ALV YSK G V+ ++ VF+ +PR +++SW +L+ GYA +G A++ FE ++ +
Sbjct: 364 TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVA 423
Query: 359 PDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAED 418
P+H+ F+ VL+AC ++GL ++G + F S+ E HG+ A HYAC+++LL R G EA
Sbjct: 424 PNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIA 483
Query: 419 VISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
I + P+K +WA+LL CR+ NL+L + AE L+ + PE YV M N+Y S
Sbjct: 484 FIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNS 540
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 289 bits (739), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 240/415 (57%), Gaps = 40/415 (9%)
Query: 61 VFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQ 120
V S ++ + G + +A+ +FDEM+ER+V ++ TMI+G+ + ++ AR LF+ MP+
Sbjct: 172 VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE 231
Query: 121 RDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKE 180
+ SWT+M+ GY + +A + + +M + V A + +G
Sbjct: 232 KTEVSWTSMLLGYTLSGRIEDAEEFFEVMP---------------MKPVIACNAMIVG-- 274
Query: 181 IHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGR 240
+G+ G I++AR++FD M DRD +W MI Y ++G
Sbjct: 275 -----------------------FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGF 311
Query: 241 REEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASA 300
E LF+++ K G+RP+ + +L+ CA A+ + G+QVH ++ R +D + AS
Sbjct: 312 ELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV 371
Query: 301 LVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPD 360
L+ MY KCG + +K VF+ D++ W S+I+GYA +G+ ++AL+ F + SGT P+
Sbjct: 372 LMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPN 431
Query: 361 HIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVI 420
+ + +LTAC++AG +++GL+ F S++ K +T T +HY+C VD+L R+G+ +A ++I
Sbjct: 432 KVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELI 491
Query: 421 SKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
M +KPD +W +LLG C+ H LDLA+ AA+ LFE EP+N TYV +++I AS
Sbjct: 492 ESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINAS 546
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 172/344 (50%), Gaps = 9/344 (2%)
Query: 5 LCNQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFIS 64
LC + R+ EA I ++ + ++++I RQN ++ +K+ + K V +
Sbjct: 182 LCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE---KTEVSWT 238
Query: 65 NCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNF 124
+ LL Y G I DA+ F+ M + V + N MI GF + G + +AR +FD M RDN
Sbjct: 239 SMLLG-YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 125 SWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKF-TLSSVLSAVSAIQCLRLGKEIHG 183
+W MI Y R +EALDL+ MQ + V F +L S+LS + + L+ G+++H
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQ--KQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 184 YIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREE 243
+++R FD D V S L MY KCG + +A+ +FD+ +D++ W ++I Y G EE
Sbjct: 356 HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEE 415
Query: 244 GFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYM-TRIGYDPYSFAASALV 302
+F E+ SG PN T +L AC+ E G ++ M ++ P S V
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTV 475
Query: 303 HMYSKCGNVENSKKVFNGMP-RPDLVSWTSLIAGYAQNGMPDKA 345
M + G V+ + ++ M +PD W +L+ + D A
Sbjct: 476 DMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 184/386 (47%), Gaps = 33/386 (8%)
Query: 65 NCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNF 124
N ++ Y G +A+ LFDEM ER+V S+N ++SG+ K + +ARN+F+ MP+R+
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 125 SWTAMISGYVRYNQPIEALDLY-RMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHG 183
SWTAM+ GY++ EA L+ RM + E S + F I R+ K
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFG--------GLIDDGRIDKARKL 163
Query: 184 YIMRTGFDSDEVVWSALSDMYGKC--GSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRR 241
Y M D V ++ + + G C G ++EAR IFD+M +R+VV+WT MI Y Q R
Sbjct: 164 YDMMPVKD----VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219
Query: 242 EEGFALFSELI-KSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASA 300
+ LF + K+ + + L+ + A E + + P A +A
Sbjct: 220 DVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEE--------FFEVMPMKPV-IACNA 270
Query: 301 LVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPD 360
++ + + G + +++VF+ M D +W +I Y + G +AL+ F + K G +P
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 361 HIVFVGVLTACTHAGLVDKGLQ-YFHSIKEKHGLTYTADHY--ACIVDLLARSGRFHEAE 417
+ +L+ C + G Q + H ++ + D Y + ++ + + G +A+
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVR----CQFDDDVYVASVLMTMYVKCGELVKAK 386
Query: 418 DVISKMPMKPDKFLWASLLGGCRIHG 443
V + K D +W S++ G HG
Sbjct: 387 LVFDRFSSK-DIIMWNSIISGYASHG 411
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 22/259 (8%)
Query: 206 KCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAG 265
+ G INEAR+ FD + + + SW +++ YF G +E LF E+ + N ++ G
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWNG 84
Query: 266 VLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPD 325
+++ + + V M + + +A+V Y + G V ++ +F MP +
Sbjct: 85 LVSGYIKNRMIVEARNVFELMP----ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN 140
Query: 326 LVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFH 385
VSWT + G +G DKA + ++++ D + ++ G VD+ F
Sbjct: 141 EVSWTVMFGGLIDDGRIDKARKLYDMM----PVKDVVASTNMIGGLCREGRVDEARLIFD 196
Query: 386 SIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNL 445
++E++ +T+T ++ ++ R A + MP K + W S+L G + G +
Sbjct: 197 EMRERNVVTWTT-----MITGYRQNNRVDVARKLFEVMPEKTE-VSWTSMLLGYTLSGRI 250
Query: 446 DLAKRAAEALFEIEPENPA 464
+ AE FE+ P P
Sbjct: 251 E----DAEEFFEVMPMKPV 265
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 288 bits (738), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 256/459 (55%), Gaps = 33/459 (7%)
Query: 20 QISHPSPSIYS--SLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNI 77
Q++ SP ++ L++ C L+ G+ VH+ + GF VF+ N L+ +YAKC +
Sbjct: 111 QLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRL 170
Query: 78 SDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYN 137
A+T+F+ + +P+R SWTA++S Y +
Sbjct: 171 GSARTVFEGL-----------------------------PLPERTIVSWTAIVSAYAQNG 201
Query: 138 QPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVW 197
+P+EAL+++ M+ + + L SVL+A + +Q L+ G+ IH +++ G + + +
Sbjct: 202 EPMEALEIFSQMRKMDVK-PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 198 SALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIR 257
+L+ MY KCG + A+ +FDKM +++ W AMI Y + G E +F E+I +R
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320
Query: 258 PNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKV 317
P+ + ++ACA + E + ++ Y+ R Y F +SAL+ M++KCG+VE ++ V
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 380
Query: 318 FNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLV 377
F+ D+V W+++I GY +G +A+ + + + G P+ + F+G+L AC H+G+V
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440
Query: 378 DKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLG 437
+G +F+ + + H + HYAC++DLL R+G +A +VI MP++P +W +LL
Sbjct: 441 REGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
Query: 438 GCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYASA 476
C+ H +++L + AA+ LF I+P N YV ++N+YA+A
Sbjct: 500 ACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAA 538
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 186/362 (51%), Gaps = 15/362 (4%)
Query: 98 MISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVS 157
+I + G + AR +FD++P+ F W A+I GY R N +AL +Y MQ
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQ-LARVSP 117
Query: 158 NKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIF 217
+ FT +L A S + L++G+ +H + R GFD+D V + L +Y KC + AR +F
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 218 D--KMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAA 275
+ + +R +VSWTA++ Y Q G E +FS++ K ++P+ VLNA
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 276 EELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAG 335
+ G+ +H + ++G + +L MY+KCG V +K +F+ M P+L+ W ++I+G
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 336 YAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTY 395
YA+NG +A++ F ++ +PD I ++AC G +++ + + Y
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS---DY 354
Query: 396 TADHY--ACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAE 453
D + + ++D+ A+ G A V + + D +W++++ G +HG RA E
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRT-LDRDVVVWSAMIVGYGLHG------RARE 407
Query: 454 AL 455
A+
Sbjct: 408 AI 409
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 146/284 (51%), Gaps = 8/284 (2%)
Query: 157 SNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQI 216
S+ F S + SA Q K+IH ++ G + + L G I ARQ+
Sbjct: 20 SDSFYASLIDSATHKAQL----KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQV 75
Query: 217 FDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAE 276
FD + + W A+I Y + ++ ++S + + + P++FTF +L AC+ +
Sbjct: 76 FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL 135
Query: 277 ELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPD--LVSWTSLIA 334
++G+ VH + R+G+D F + L+ +Y+KC + +++ VF G+P P+ +VSWT++++
Sbjct: 136 QMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVS 195
Query: 335 GYAQNGMPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLT 394
YAQNG P +ALE F + K +PD + V VL A T + +G + H+ K GL
Sbjct: 196 AYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG-RSIHASVVKMGLE 254
Query: 395 YTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGG 438
D + + A+ G+ A+ + KM P+ LW +++ G
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISG 297
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 288 bits (737), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 231/404 (57%), Gaps = 41/404 (10%)
Query: 73 KCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISG 132
K G + +A+ +FDEM ER V ++ TM++G+ + ++ AR +FD MP++ SWT+M+ G
Sbjct: 184 KEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243
Query: 133 YVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDS 192
YV+ + +A +L+ V+ I C
Sbjct: 244 YVQNGRIEDAEELF-----------------EVMPVKPVIAC------------------ 268
Query: 193 DEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELI 252
+A+ G+ G I +AR++FD M +R+ SW +I + + G E LF +
Sbjct: 269 -----NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQ 323
Query: 253 KSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVE 312
K G+RP T +L+ CA A+ GKQVH + R +D + AS L+ MY KCG +
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELV 383
Query: 313 NSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYF-ELLLKSGTQPDHIVFVGVLTAC 371
SK +F+ P D++ W S+I+GYA +G+ ++AL+ F E+ L T+P+ + FV L+AC
Sbjct: 384 KSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC 443
Query: 372 THAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFL 431
++AG+V++GL+ + S++ G+ HYAC+VD+L R+GRF+EA ++I M ++PD +
Sbjct: 444 SYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAV 503
Query: 432 WASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMANIYAS 475
W SLLG CR H LD+A+ A+ L EIEPEN TY+ ++N+YAS
Sbjct: 504 WGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYAS 547
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 180/345 (52%), Gaps = 10/345 (2%)
Query: 5 LCNQRRLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFIS 64
LC + R+ EA +I ++S S +++++ QN +++ +K+ + K V +
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE---KTEVSWT 238
Query: 65 NCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNF 124
+ L+ Y + G I DA+ LF+ M + V + N MISG + G + +AR +FD M +R++
Sbjct: 239 SMLMG-YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 125 SWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKF-TLSSVLSAVSAIQCLRLGKEIHG 183
SW +I + R +EALDL+ +MQ + V F TL S+LS +++ L GK++H
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQ--KQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 184 YIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREE 243
++R FD D V S L MY KCG + +++ IFD+ +D++ W ++I Y G EE
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415
Query: 244 GFALFSELIKSG-IRPNAFTFAGVLNACADHAAEELGKQVHGYMTRI-GYDPYSFAASAL 301
+F E+ SG +PN TF L+AC+ E G +++ M + G P + + +
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475
Query: 302 VHMYSKCGNVENSKKVFNGMP-RPDLVSWTSLIAGYAQNGMPDKA 345
V M + G + ++ + M PD W SL+ + D A
Sbjct: 476 VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA 520
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 180/409 (44%), Gaps = 46/409 (11%)
Query: 64 SNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDN 123
+N + ++ G I +A+ LFD + + S+N+M++G+ AR LFDEMP R+
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 124 FSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLS------SVLSAVSAIQCLRL 177
SW ++SGY++ + EA ++ +M N VS + V A S +
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPE-RNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 178 GKEIHGYIMRTGF-----------------DSDEVVWSALSDMYGKCGSINEARQIFDKM 220
++ +M GF D D + +++ K G ++EAR+IFD+M
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 221 VDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGK 280
+R V++WT M+ Y Q R ++ +F + + G + AEEL
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL-- 256
Query: 281 QVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNG 340
+ P A +A++ + G + +++VF+ M + SW ++I + +NG
Sbjct: 257 -----FEVMPVKPV-IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNG 310
Query: 341 MPDKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHG----LTYT 396
+AL+ F L+ K G +P + +L+ C L H K+ H +
Sbjct: 311 FELEALDLFILMQKQGVRPTFPTLISILSVCA-------SLASLHHGKQVHAQLVRCQFD 363
Query: 397 ADHY--ACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHG 443
D Y + ++ + + G +++ + + P K D +W S++ G HG
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASHG 411
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 253/484 (52%), Gaps = 64/484 (13%)
Query: 23 HPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQT 82
+P+ + LI+ + +L G+ +H S VF++N L+ Y CG+
Sbjct: 128 YPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD------ 181
Query: 83 LFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEA 142
L+ A +F + ++D SW +MI+G+V+ P +A
Sbjct: 182 -------------------------LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216
Query: 143 LDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSD 202
L+L++ M++ E+ ++ T+ VLSA + I+ L G+++ YI + + + +A+ D
Sbjct: 217 LELFKKMES-EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 203 MYGKCGSINEARQIFDKMVDRD-------------------------------VVSWTAM 231
MY KCGSI +A+++FD M ++D +V+W A+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 232 IGRYFQEGRREEGFALFSEL-IKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRIG 290
I Y Q G+ E +F EL ++ ++ N T L+ACA A ELG+ +H Y+ + G
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 291 YDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFE 350
SAL+HMYSKCG++E S++VFN + + D+ W+++I G A +G ++A++ F
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 351 LLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARS 410
+ ++ +P+ + F V AC+H GLVD+ FH ++ +G+ HYACIVD+L RS
Sbjct: 456 KMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 411 GRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVTMA 470
G +A I MP+ P +W +LLG C+IH NL+LA+ A L E+EP N +V ++
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 471 NIYA 474
NIYA
Sbjct: 576 NIYA 579
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 212/410 (51%), Gaps = 38/410 (9%)
Query: 99 ISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSN 158
++ + SLE AR +FDE+P+ ++F+W +I Y P+ ++ + M + N
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 159 KFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFD 218
K+T ++ A + + L LG+ +HG +++ SD V ++L Y CG ++ A ++F
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 219 KMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEEL 278
+ ++DVVSW +MI + Q+G ++ LF ++ ++ + T GVL+ACA E
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 279 GKQVHGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVF-------------------- 318
G+QV Y+ + A+A++ MY+KCG++E++K++F
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310
Query: 319 -----------NGMPRPDLVSWTSLIAGYAQNGMPDKALEYF-ELLLKSGTQPDHIVFVG 366
N MP+ D+V+W +LI+ Y QNG P++AL F EL L+ + + I V
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 367 VLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMK 426
L+AC G ++ G ++ HS +KHG+ + ++ + ++ G ++ +V + + K
Sbjct: 371 TLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-K 428
Query: 427 PDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPEN-PATYVTMANIYAS 475
D F+W++++GG +HG A + ++++ N VT N++ +
Sbjct: 429 RDVFVWSAMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 144/293 (49%), Gaps = 5/293 (1%)
Query: 166 LSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM--YGKCGSINEARQIFDKMVDR 223
+S + LR K+ HG+++RTG SD S L M S+ AR++FD++
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 224 DVVSWTAMIGRYFQEGRREEGFALFSELI-KSGIRPNAFTFAGVLNACADHAAEELGKQV 282
+ +W +I Y F +++ +S PN +TF ++ A A+ ++ LG+ +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 283 HGYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMP 342
HG + F A++L+H Y CG+++++ KVF + D+VSW S+I G+ Q G P
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 343 DKALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYAC 402
DKALE F+ + + H+ VGVL+AC ++ G Q I+E +
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR-VNVNLTLANA 272
Query: 403 IVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEAL 455
++D+ + G +A+ + M K D W ++L G I + + A+ ++
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEK-DNVTWTTMLDGYAISEDYEAAREVLNSM 324
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 280 KQVHGYMTRIGY--DPYS----FAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLI 333
KQ HG+M R G DPYS FA +AL S ++E ++KVF+ +P+P+ +W +LI
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAAL----SSFASLEYARKVFDEIPKPNSFAWNTLI 102
Query: 334 AGYAQNGMPDKALE---YFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEK 390
YA PD L + +++ +S P+ F ++ A + G Q H + K
Sbjct: 103 RAYASG--PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG-QSLHGMAVK 159
Query: 391 HGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKR 450
+ ++ G A V + + K D W S++ G G+ D +
Sbjct: 160 SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK-DVVSWNSMINGFVQKGSPD---K 215
Query: 451 AAEALFEIEPEN-PATYVTMANIYAS 475
A E ++E E+ A++VTM + ++
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSA 241
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/493 (32%), Positives = 264/493 (53%), Gaps = 46/493 (9%)
Query: 28 IYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTLFDEM 87
I +++ CR + H+ + G K + + N LL +Y K G + DA LF EM
Sbjct: 160 ILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEM 219
Query: 88 QERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNF-----SWTAMISGYVRYNQPIEA 142
R+ S+N MI GF++ E A +F+ M QR+ F +WT+++S + + + +
Sbjct: 220 PVRNRMSWNVMIKGFSQEYDCESAVKIFEWM-QREEFKPDEVTWTSVLSCHSQCGKFEDV 278
Query: 143 LDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSD 202
L + +M+ N+VS + L+ S + ++ L + +++HGY+++ GF+ +AL
Sbjct: 279 LKYFHLMRMSGNAVSGE-ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIH 337
Query: 203 MYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSEL----------- 251
+YGK G + +A +F ++ ++ + SW ++I + G+ +E +LFSEL
Sbjct: 338 VYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKA 397
Query: 252 --------IK--------------------SGIRPNAFTFAGVLNACADHAAEELGKQVH 283
IK S + N+ T +L+ CA+ A LG+++H
Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIH 457
Query: 284 GYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPD 343
G++ R +ALV+MY+KCG + VF + DL+SW S+I GY +G +
Sbjct: 458 GHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAE 517
Query: 344 KALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACI 403
KAL F+ ++ SG PD I V VL+AC+HAGLV+KG + F+S+ ++ GL +HYACI
Sbjct: 518 KALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACI 577
Query: 404 VDLLARSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENP 463
VDLL R G EA +++ MPM+P + +LL CR+H N+D+A+ A L +EPE
Sbjct: 578 VDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERT 637
Query: 464 ATYVTMANIYASA 476
+Y+ ++NIY++
Sbjct: 638 GSYMLLSNIYSAG 650
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 164/392 (41%), Gaps = 80/392 (20%)
Query: 10 RLKEALQILHQISHPSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLD 69
R+ +A + ++ + ++ +I+ Q E K+ ++ FKP +L
Sbjct: 208 RMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLS 267
Query: 70 MYAKCGNISDAQTLFDEMQ---------------------------------------ER 90
+++CG D F M+ E
Sbjct: 268 CHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEE 327
Query: 91 DVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEALDL----- 145
+ S N +I + K G ++ A +LF ++ + SW ++I+ +V + EAL L
Sbjct: 328 YLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELE 387
Query: 146 ----------------------------------YRMMQNFENSVSNKFTLSSVLSAVSA 171
+R MQ F ++N T+ +LS +
Sbjct: 388 EMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ-FSKVLANSVTICCILSICAE 446
Query: 172 IQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAM 231
+ L LG+EIHG+++RT + +V +AL +MY KCG ++E +F+ + D+D++SW ++
Sbjct: 447 LPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSI 506
Query: 232 IGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMT-RIG 290
I Y G E+ ++F +I SG P+ VL+AC+ E G+++ M+ R G
Sbjct: 507 IKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFG 566
Query: 291 YDPYSFAASALVHMYSKCGNVENSKKVFNGMP 322
+P + +V + + G ++ + ++ MP
Sbjct: 567 LEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 106/224 (47%), Gaps = 8/224 (3%)
Query: 169 VSAIQCLRLGKEIHGYIMRTGFDSDEVVWSA-LSDMYGKCGSINEARQIFDKM---VDRD 224
++A QC +++H ++ + F +A L +Y + G + +AR +F+ + + D
Sbjct: 67 LTAQQC----RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSD 122
Query: 225 VVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHG 284
+ W +++ G E L+ + + G+ + + +L AC L + H
Sbjct: 123 LRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHT 182
Query: 285 YMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDK 344
+ +IG + L+ +Y K G + ++ +F MP + +SW +I G++Q +
Sbjct: 183 QVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCES 242
Query: 345 ALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIK 388
A++ FE + + +PD + + VL+ + G + L+YFH ++
Sbjct: 243 AVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/494 (32%), Positives = 262/494 (53%), Gaps = 58/494 (11%)
Query: 5 LCNQRRLKEALQILHQIS----HPSPSIYSSLIQFCRQNRALEEGKKVHSH-LKSSGFKP 59
LC +L EAL+ L ++ P SS++ C L GK++H++ LK+
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 60 GVFISNCLLDMYAKCGNISDAQTLFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMP 119
F+ + L+DMY C + + +FD M +R + G
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI--------GL----------------- 371
Query: 120 QRDNFSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLG- 178
W AMI+GY + EAL L+ M+ ++N T++ V+ A C+R G
Sbjct: 372 ------WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA-----CVRSGA 420
Query: 179 ----KEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGR 234
+ IHG++++ G D D V + L DMY + G I+ A +IF KM DRD+V+W MI
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 235 YFQEGRREEGFALFSEL-----------IKSGIRPNAFTFAGVLNACADHAAEELGKQVH 283
Y E+ L ++ + ++PN+ T +L +CA +A GK++H
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 284 GYMTRIGYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPD 343
Y + SALV MY+KCG ++ S+KVF+ +P+ ++++W +I Y +G
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 344 KALEYFELLLKSGTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACI 403
+A++ +++ G +P+ + F+ V AC+H+G+VD+GL+ F+ +K +G+ ++DHYAC+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 404 VDLLARSGRFHEAEDVISKMPMKPDKF-LWASLLGGCRIHGNLDLAKRAAEALFEIEPEN 462
VDLL R+GR EA +++ MP +K W+SLLG RIH NL++ + AA+ L ++EP
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 463 PATYVTMANIYASA 476
+ YV +ANIY+SA
Sbjct: 721 ASHYVLLANIYSSA 734
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 201/421 (47%), Gaps = 41/421 (9%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFK-PGVFISNCLLDMYAKCGNISDAQT 82
P + +L++ + +E GK++H+H+ G+ V ++N L+++Y KCG+
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 83 LFDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEA 142
+FD + ER+ S+N++IS S E+ W A
Sbjct: 155 VFDRISERNQVSWNSLISSLC---SFEK---------------WEM-------------A 183
Query: 143 LDLYRMMQNFENSVSNKFTLSSVLSAVSAI---QCLRLGKEIHGYIMRTGFDSDEVVWSA 199
L+ +R M + EN + FTL SV++A S + + L +GK++H Y +R G + + + +
Sbjct: 184 LEAFRCMLD-ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINT 241
Query: 200 LSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKSGIRPN 259
L MYGK G + ++ + RD+V+W ++ Q + E E++ G+ P+
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 260 AFTFAGVLNACADHAAEELGKQVHGYMTRIG-YDPYSFAASALVHMYSKCGNVENSKKVF 318
FT + VL AC+ GK++H Y + G D SF SALV MY C V + ++VF
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 319 NGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKS-GTQPDHIVFVGVLTACTHAGLV 377
+GM + W ++IAGY+QN +AL F + +S G + GV+ AC +G
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 378 DKGLQYFHSIKEKHGLTYTADHYACIVDLLARSGRFHEAEDVISKMPMKPDKFLWASLLG 437
+ + H K GL ++D+ +R G+ A + KM + D W +++
Sbjct: 422 SRK-EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMIT 479
Query: 438 G 438
G
Sbjct: 480 G 480
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 138/271 (50%), Gaps = 7/271 (2%)
Query: 126 WTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYI 185
W ++ VR N EA+ Y M N + ++L AV+ +Q + LGK+IH ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDN-YAFPALLKAVADLQDMELGKQIHAHV 123
Query: 186 MRTGFDSDEV-VWSALSDMYGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEG 244
+ G+ D V V + L ++Y KCG ++FD++ +R+ VSW ++I + E
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 245 FALFSELIKSGIRPNAFTFAGVLNACADHAAEE---LGKQVHGYMTRIGYDPYSFAASAL 301
F ++ + P++FT V+ AC++ E +GKQVH Y R G + SF + L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 302 VHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDH 361
V MY K G + +SK + DLV+W ++++ QN +ALEY ++ G +PD
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 362 IVFVGVLTACTHAGLVDKGLQYFHSIKEKHG 392
VL AC+H ++ G + H+ K+G
Sbjct: 303 FTISSVLPACSHLEMLRTG-KELHAYALKNG 332
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 286 bits (731), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 225/367 (61%), Gaps = 2/367 (0%)
Query: 111 ARNLFDEMPQRDN-FSWTAMISGYVRYNQPIEALDLYRMMQNFENSVSNKFTLSSVLSAV 169
A +F ++ + N F W +I GY I A LYR M+ + T ++ AV
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 170 SAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDMYGKCGSINEARQIFDKMVDRDVVSWT 229
+ + +RLG+ IH ++R+GF S V ++L +Y CG + A ++FDKM ++D+V+W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 230 AMIGRYFQEGRREEGFALFSELIKSGIRPNAFTFAGVLNACADHAAEELGKQVHGYMTRI 289
++I + + G+ EE AL++E+ GI+P+ FT +L+ACA A LGK+VH YM ++
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 290 GYDPYSFAASALVHMYSKCGNVENSKKVFNGMPRPDLVSWTSLIAGYAQNGMPDKALEYF 349
G +++ L+ +Y++CG VE +K +F+ M + VSWTSLI G A NG +A+E F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 350 ELLLKS-GTQPDHIVFVGVLTACTHAGLVDKGLQYFHSIKEKHGLTYTADHYACIVDLLA 408
+ + + G P I FVG+L AC+H G+V +G +YF ++E++ + +H+ C+VDLLA
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 409 RSGRFHEAEDVISKMPMKPDKFLWASLLGGCRIHGNLDLAKRAAEALFEIEPENPATYVT 468
R+G+ +A + I MPM+P+ +W +LLG C +HG+ DLA+ A + ++EP + YV
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 469 MANIYAS 475
++N+YAS
Sbjct: 432 LSNMYAS 438
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 168/344 (48%), Gaps = 43/344 (12%)
Query: 24 PSPSIYSSLIQFCRQNRALEEGKKVHSHLKSSGFKPGVFISNCLLDMYAKCGNISDAQTL 83
P Y LI+ + G+ +HS + SGF +++ N LL +YA CG+++ A +
Sbjct: 119 PDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV 178
Query: 84 FDEMQERDVCSYNTMISGFTKGGSLEQARNLFDEMPQRDNFSWTAMISGYVRYNQPIEAL 143
FD+M E+D+ ++N++I+GF + G E+A L+ EM
Sbjct: 179 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM------------------------- 213
Query: 144 DLYRMMQNFENSVSNKFTLSSVLSAVSAIQCLRLGKEIHGYIMRTGFDSDEVVWSALSDM 203
N + + FT+ S+LSA + I L LGK +H Y+++ G + + L D+
Sbjct: 214 -------NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 204 YGKCGSINEARQIFDKMVDRDVVSWTAMIGRYFQEGRREEGFALFSELIKS-GIRPNAFT 262
Y +CG + EA+ +FD+MVD++ VSWT++I G +E LF + + G+ P T
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326
Query: 263 FAGVLNACADHAAEELGKQVHGYMTRI----GYDPYSFAASALVHMYSKCGNVENSKKVF 318
F G+L AC+ H + K+ Y R+ +P +V + ++ G V+ + +
Sbjct: 327 FVGILYACS-HCG--MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 319 NGMP-RPDLVSWTSLIAGYAQNGMPDKALEYFELLLKSGTQPDH 361
MP +P++V W +L+ +G D L F + +P+H
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPNH 425
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,222,634
Number of Sequences: 539616
Number of extensions: 7509245
Number of successful extensions: 25824
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 16808
Number of HSP's gapped (non-prelim): 2344
length of query: 476
length of database: 191,569,459
effective HSP length: 121
effective length of query: 355
effective length of database: 126,275,923
effective search space: 44827952665
effective search space used: 44827952665
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)