BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038938
(194 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Z7Y|A Chain A, Crystal Structure Of The Arabidopsis Thaliana
O-Acetylserine Sulfhydrylase K46a Mutant
Length = 322
Score = 152 bits (385), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 123/225 (54%), Gaps = 41/225 (18%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI SMI DAE KG I PG+ +VL+E TS N G+GLA A+++GYK+I+ MP +
Sbjct: 44 SVADRIGFSMISDAEKKGLIKPGE--SVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASM 101
Query: 68 SIQRR-----------------------------MSKIPNAYLLQQHENPANPKI----- 93
S +RR ++K PN Y+LQQ ENPANPKI
Sbjct: 102 STERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETT 161
Query: 94 ----WKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
WK +GGK D V+ A K+LKE+N +K+YG+E VESA+L+GGKPG H
Sbjct: 162 GPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPH 221
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P+VL++ ++DEV V + + ++LALK GLL
Sbjct: 222 KIQGIGAGFIPSVLNVDLIDEVVQVSSDESI-DMARQLALKEGLL 265
>pdb|1Z7W|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana
Length = 322
Score = 152 bits (385), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 123/225 (54%), Gaps = 41/225 (18%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI SMI DAE KG I PG+ +VL+E TS N G+GLA A+++GYK+I+ MP +
Sbjct: 44 SVKDRIGFSMISDAEKKGLIKPGE--SVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASM 101
Query: 68 SIQRR-----------------------------MSKIPNAYLLQQHENPANPKI----- 93
S +RR ++K PN Y+LQQ ENPANPKI
Sbjct: 102 STERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETT 161
Query: 94 ----WKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
WK +GGK D V+ A K+LKE+N +K+YG+E VESA+L+GGKPG H
Sbjct: 162 GPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPH 221
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P+VL++ ++DEV V + + ++LALK GLL
Sbjct: 222 KIQGIGAGFIPSVLNVDLIDEVVQVSSDESI-DMARQLALKEGLL 265
>pdb|2ISQ|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana In Complex With C-Terminal Peptide
From Arabidopsis Serine Acetyltransferase
Length = 320
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 123/225 (54%), Gaps = 41/225 (18%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI SMI DAE KG I PG+ +VL+E TS N G+GLA A+++GYK+I+ MP +
Sbjct: 42 SVKDRIGFSMISDAEKKGLIKPGE--SVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASM 99
Query: 68 SIQRR-----------------------------MSKIPNAYLLQQHENPANPKI----- 93
S +RR ++K PN Y+LQQ ENPANPKI
Sbjct: 100 STERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETT 159
Query: 94 ----WKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
WK +GGK D V+ A K+LKE+N +K+YG+E VESA+L+GGKPG H
Sbjct: 160 GPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPH 219
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P+VL++ ++DEV V + + ++LALK GLL
Sbjct: 220 KIQGIGAGFIPSVLNVDLIDEVVQVSSDESI-DMARQLALKEGLL 263
>pdb|4AEC|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
pdb|4AEC|B Chain B, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
Length = 430
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 118/225 (52%), Gaps = 41/225 (18%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI SM+ DAE KG ISPGK +VLVE TS N GIGLA IA+SRGY++I+ MP +
Sbjct: 152 SVKDRIGYSMVTDAEQKGFISPGK--SVLVEPTSGNTGIGLAFIAASRGYRLILTMPASM 209
Query: 68 SIQRR-----------------------------MSKIPNAYLLQQHENPANPKI----- 93
S++RR + P+AY+LQQ +NPANPKI
Sbjct: 210 SMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETT 269
Query: 94 ----WKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
W D+ GK D VA +F+KEKN + +V G+E ES +L+GGKPG H
Sbjct: 270 GPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPH 329
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P LD K++DEV + ET K+LALK GL+
Sbjct: 330 KIQGIGAGFIPKNLDQKIMDEV-IAISSEEAIETAKQLALKEGLM 373
>pdb|3VC3|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|E Chain E, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|F Chain F, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
Length = 344
Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 113/225 (50%), Gaps = 41/225 (18%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R A +MI DAE+K I+PGK L+E TS N GI +A +A+ +GYK+++ MP+
Sbjct: 64 SIADRPAYAMITDAEEKNLITPGK--TTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYT 121
Query: 68 SIQRRMS-----------------------------KIPNAYLLQQHENPAN-------- 90
S++RR++ PNA++LQQ NPAN
Sbjct: 122 SLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETT 181
Query: 91 -PKIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
P+IW+D+ G+ D V ++LK KN +K+YG+E ES VLNGGKPG H
Sbjct: 182 GPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPH 241
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P +LD+ ++++V V V + LALK GL+
Sbjct: 242 HITGNGVGFKPDILDLDVMEKVLEVSSEDAVN-MARVLALKEGLM 285
>pdb|3VBE|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
Length = 344
Score = 123 bits (308), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 113/225 (50%), Gaps = 41/225 (18%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R A +MI DAE+K I+PGK L+E TS N GI +A +A+ +GYK+++ MP+
Sbjct: 64 SIKDRPAYAMITDAEEKNLITPGK--TTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYT 121
Query: 68 SIQRRMS-----------------------------KIPNAYLLQQHENPAN-------- 90
S++RR++ PNA++LQQ NPAN
Sbjct: 122 SLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETT 181
Query: 91 -PKIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
P+IW+D+ G+ D V ++LK KN +K+YG+E ES VLNGGKPG H
Sbjct: 182 GPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPH 241
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P +LD+ ++++V V V + LALK GL+
Sbjct: 242 HITGNGVGFKPDILDLDVMEKVLEVSSEDAVN-MARVLALKEGLM 285
>pdb|4I1Y|A Chain A, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|B Chain B, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|C Chain C, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|D Chain D, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
Length = 314
Score = 103 bits (256), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 105/225 (46%), Gaps = 42/225 (18%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI +MI AE G I P +++E TS N GI LA ++++RGYK ++ MP+T
Sbjct: 46 SIKDRIGVAMIDAAEKAGLIKPD---TIILEPTSGNTGIALAMVSAARGYKCVLTMPDTM 102
Query: 68 SIQRRM----------------------------SKIPNAYLL-QQHENPANP------- 91
SI+RRM +K + Y + QQ ENPANP
Sbjct: 103 SIERRMLLRAYGAELVLTPGAEGMAGAIAKAEELAKTDDRYFIPQQFENPANPAVHAVTT 162
Query: 92 --KIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
++W+D+ GK D V+ + +K++ + +E S VL+GG+ G H
Sbjct: 163 AEEVWRDTDGKVDIFVSGVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGGQKGPH 222
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P VLD+ ++DEV TV + E +R+A + GLL
Sbjct: 223 PIQGIGAGFVPPVLDLALVDEVITVGNDDAL-ELARRMATEEGLL 266
>pdb|3RR2|A Chain A, Structure Of A Cysteine Synthase (O-Acetylserine
Sulfhydrylase (Oass)) From Mycobacterium Marinum Atcc
Baa-535 M
Length = 314
Score = 103 bits (256), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 105/225 (46%), Gaps = 42/225 (18%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI +MI AE G I P +++E TS N GI LA ++++RGYK ++ MP+T
Sbjct: 46 SIKDRIGVAMIDAAEKAGLIKPD---TIILEPTSGNTGIALAMVSAARGYKCVLTMPDTM 102
Query: 68 SIQRRM----------------------------SKIPNAYLL-QQHENPANP------- 91
SI+RRM +K + Y + QQ ENPANP
Sbjct: 103 SIERRMLLRAYGAELVLTPGAEGMAGAIAKAEELAKTDDRYFIPQQFENPANPAVHAVTT 162
Query: 92 --KIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
++W+D+ GK D V+ + +K++ + +E S VL+GG+ G H
Sbjct: 163 AEEVWRDTDGKVDIFVSGVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGGQKGPH 222
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P VLD+ ++DEV TV + E +R+A + GLL
Sbjct: 223 PIQGIGAGFVPPVLDLALVDEVITVGNDDAL-ELARRMATEEGLL 266
>pdb|2Q3B|A Chain A, 1.8 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis
pdb|2Q3C|A Chain A, 2.1 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis In Complex With The Inhibitory Peptide Dfsi
Length = 313
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 42/225 (18%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI +M++ AE G I P +++E TS N GI LA + ++RGY+ ++ MP T
Sbjct: 45 SVXDRIGVAMLQAAEQAGLIKPD---TIILEPTSGNTGIALAMVCAARGYRCVLTMPETM 101
Query: 68 SIQRRM----------------------------SKIPNAYLL-QQHENPANP------- 91
S++RRM +K Y + QQ ENPANP
Sbjct: 102 SLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTT 161
Query: 92 --KIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
++W+D+ GK D +VA + +KE+ + +E S VL+GG+ G H
Sbjct: 162 AEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPH 221
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P VLD ++DE+ TV + +RLA + GLL
Sbjct: 222 PIQGIGAGFVPPVLDQDLVDEIITVGNEDALN-VARRLAREEGLL 265
>pdb|2Q3D|A Chain A, 2.2 A Resolution Crystal Structure Of O-acetylserine
Sulfhydrylase (oass) From Mycobacterium Tuberculosis In
Complex With The Reaction Intermediate
Alpha-aminoacrylate
Length = 313
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 42/225 (18%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI +M++ AE G I P +++E TS N GI LA + ++RGY+ ++ MP T
Sbjct: 45 SVKDRIGVAMLQAAEQAGLIKPD---TIILEPTSGNTGIALAMVCAARGYRCVLTMPETM 101
Query: 68 SIQRRM----------------------------SKIPNAYLL-QQHENPANP------- 91
S++RRM +K Y + QQ ENPANP
Sbjct: 102 SLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTT 161
Query: 92 --KIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
++W+D+ GK D +VA + +KE+ + +E S VL+GG+ G H
Sbjct: 162 AEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPH 221
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P VLD ++DE+ TV + +RLA + GLL
Sbjct: 222 PIQGIGAGFVPPVLDQDLVDEIITVGNEDALN-VARRLAREEGLL 265
>pdb|2EGU|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrase From
Geobacillus Kaustophilus Hta426
Length = 308
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 98/204 (48%), Gaps = 40/204 (19%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RIA +MI+ AE G + PG + +VE TS N GIGLA +A+++GYK ++ MP+T
Sbjct: 43 SVKDRIALAMIEAAEKAGKLKPG---DTIVEPTSGNTGIGLAMVAAAKGYKAVLVMPDTM 99
Query: 68 SIQRR---------MSKIPNA-------------------YLLQQHENPANPKIWKDSGG 99
S++RR + P A ++ QQ +N ANP+I + + G
Sbjct: 100 SLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREHGYFMPQQFKNEANPEIHRLTTG 159
Query: 100 K---------FDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLHL 150
K DA VA A K L+E +K+Y +E +S VL+GGKPG H
Sbjct: 160 KEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGGKPGPHK 219
Query: 151 XXXXXXXXXPTVLDIKMLDEVKTV 174
P +LD + D V TV
Sbjct: 220 IQGIGAGFVPDILDTSIYDGVITV 243
>pdb|1VE1|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase
pdb|2ECO|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Methylvalerate
pdb|2ECQ|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 3-Hydroxylactate
pdb|2EFY|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
pdb|2EFY|B Chain B, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
Length = 304
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 2 GLLDHPSTPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIV 61
GL S R A MIKDAE++G + PG V+VE TS N GIGLA IA+SRGY++I+
Sbjct: 32 GLNPGGSIKDRPAWYMIKDAEERGILRPGSG-QVIVEPTSGNTGIGLAMIAASRGYRLIL 90
Query: 62 KMPNTYSIQR----------------------------RMSKIPNAYLLQQHENPAN--- 90
MP S +R R+ + A++ Q +NPAN
Sbjct: 91 TMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEELGAFMPDQFKNPANVRA 150
Query: 91 ------PKIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGG 144
P++++ G+ DA V ++LKE+ +KV +E S VL+GG
Sbjct: 151 HYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGG 210
Query: 145 KPGLHLXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
K G H P LD+ +LD V V +RLA + GL
Sbjct: 211 KMGQHGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFP-LARRLAREEGLF 259
>pdb|4AIR|A Chain A, Leishmania Major Cysteine Synthase
pdb|4AIR|B Chain B, Leishmania Major Cysteine Synthase
Length = 354
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 40/205 (19%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R+ ++ AE +G + PGK +V+VE +S N G+ LA + + RGYK+I+ MP +
Sbjct: 70 SVKDRLGFAIYDKAEKEGKLIPGK--SVVVESSSGNTGVSLAHLGAIRGYKVIITMPESM 127
Query: 68 SIQRR-----------------------------MSKIPNAYLLQQ---------HENPA 89
S++RR ++ PNA L Q HE
Sbjct: 128 SLERRCLLRIFGAEVILTPAALGMKGAVTMAKKIVTANPNAVLADQFATKYNALIHEETT 187
Query: 90 NPKIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
P+IW+ + D +A + LK+ ++ +E +ES VL+GGKPG H
Sbjct: 188 GPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPMESPVLSGGKPGAH 247
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTV 174
P VLD ++DEV V
Sbjct: 248 KIQGIGPGFVPDVLDRSLIDEVFCV 272
>pdb|3T4P|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani In Complex With Designed
Tetrapeptide
pdb|3TBH|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase In
Complex With Octapeptide Derived From Serine Acetyl
Transferase Of Leishmania Donovani
pdb|3SPX|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani
Length = 334
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 40/205 (19%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R+ ++ AE +G + PGK +++VE +S N G+ LA + + RGYK+I+ MP +
Sbjct: 49 SVXDRLGFAIYDKAEKEGKLIPGK--SIVVESSSGNTGVSLAHLGAIRGYKVIITMPESM 106
Query: 68 SIQRR-----------------------------MSKIPNAYLLQQ---------HENPA 89
S++RR ++ PNA L Q HE
Sbjct: 107 SLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETT 166
Query: 90 NPKIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
P+IW+ + D +A + LK+ ++ +E ES VL+GGKPG H
Sbjct: 167 GPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKPGPH 226
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTV 174
P VLD ++DEV V
Sbjct: 227 KIQGIGPGFVPDVLDRSLIDEVLCV 251
>pdb|1D6S|A Chain A, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
pdb|1D6S|B Chain B, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
Length = 322
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 51/234 (21%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI +MI DAE +G + PG + LVE T+ N GI LA +A++RGYK+ + MP T
Sbjct: 39 SVACRIGANMIWDAEKRGVLKPGVE---LVEPTNGNTGIALAYVAAARGYKLTLTMPETM 95
Query: 68 SIQRR-----------------------------MSKIPNAY-LLQQHENPAN------- 90
SI+RR ++ P Y LLQQ NPAN
Sbjct: 96 SIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKT 155
Query: 91 --PKIWKDSGGKFDALVAXXXXXXXXXXAEKFLK--EKNLEMKVYGIESVESAVLNGG-- 144
P+IW+D+ G+ D ++ +++K + ++ +E +S V+
Sbjct: 156 TGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALA 215
Query: 145 ----KPGLHLXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
KPG H P LD+K++D+V + ++ T +RL + G+L
Sbjct: 216 GEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAIS-TARRLMEEEGIL 268
>pdb|1OAS|A Chain A, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1OAS|B Chain B, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1FCJ|A Chain A, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|B Chain B, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|C Chain C, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|D Chain D, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
Length = 322
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 51/234 (21%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI +MI DAE +G + PG + LVE T+ N GI LA +A++RGYK+ + MP T
Sbjct: 39 SVKCRIGANMIWDAEKRGVLKPGVE---LVEPTNGNTGIALAYVAAARGYKLTLTMPETM 95
Query: 68 SIQRR-----------------------------MSKIPNAY-LLQQHENPAN------- 90
SI+RR ++ P Y LLQQ NPAN
Sbjct: 96 SIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKT 155
Query: 91 --PKIWKDSGGKFDALVAXXXXXXXXXXAEKFLK--EKNLEMKVYGIESVESAVLNGG-- 144
P+IW+D+ G+ D ++ +++K + ++ +E +S V+
Sbjct: 156 TGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALA 215
Query: 145 ----KPGLHLXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
KPG H P LD+K++D+V + ++ T +RL + G+L
Sbjct: 216 GEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAIS-TARRLMEEEGIL 268
>pdb|3FCA|A Chain A, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
pdb|3FCA|B Chain B, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
Length = 291
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 98/225 (43%), Gaps = 44/225 (19%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R A MI DAE +G + G +VE TS N GI +A I + RG+++I+ MP T
Sbjct: 33 SVKDRPALFMILDAEKRGLLKNG-----IVEPTSGNMGIAIAMIGAKRGHRVILTMPETM 87
Query: 68 SIQRR----------------------------MSKIPNAYLLQQHENPAN--------- 90
S++RR +S+ A++L Q ENP N
Sbjct: 88 SVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRETGAHMLNQFENPYNVYSHQFTTG 147
Query: 91 PKIWKDSGGKFDALVAXXXXXXXXXXAEKFLKE-KNLEMKVYGIESVESAVLNGGKPGLH 149
P+I K + DA VA + LK +K+ +E +S VL+GG+PG H
Sbjct: 148 PEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKH 207
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P +LD ++DEV TV E + LA K GLL
Sbjct: 208 AIQGIGAGFVPKILDRSVIDEVITV-EDEEAYEMARYLAKKEGLL 251
>pdb|1O58|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
Length = 303
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 98/225 (43%), Gaps = 44/225 (19%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R A MI DAE +G + G +VE TS N GI +A I + RG+++I+ MP T
Sbjct: 45 SVKDRPALFMILDAEKRGLLKNG-----IVEPTSGNMGIAIAMIGAKRGHRVILTMPETM 99
Query: 68 SIQRR----------------------------MSKIPNAYLLQQHENPAN--------- 90
S++RR +S+ A++L Q ENP N
Sbjct: 100 SVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRETGAHMLNQFENPYNVYSHQFTTG 159
Query: 91 PKIWKDSGGKFDALVAXXXXXXXXXXAEKFLKE-KNLEMKVYGIESVESAVLNGGKPGLH 149
P+I K + DA VA + LK +K+ +E +S VL+GG+PG H
Sbjct: 160 PEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKH 219
Query: 150 LXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P +LD ++DEV TV E + LA K GLL
Sbjct: 220 AIQGIGAGFVPKILDRSVIDEVITV-EDEEAYEMARYLAKKEGLL 263
>pdb|2BHT|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase B
Length = 303
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 52/226 (23%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R A SMI +AE +G I PG +VL+E TS N GI LA IA+ +GY++ + MP+
Sbjct: 39 SVXDRAALSMIVEAEKRGRIKPG---DVLIEATSGNTGIALAMIAALKGYRMKLLMPDNM 95
Query: 68 SIQRR----------------------------MSKIPNAYLLQQHENPANPK------- 92
S +RR M+ LL Q NP NPK
Sbjct: 96 SQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPKAHYTTTG 155
Query: 93 --IWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLHL 150
IW+ +GG+ V+ +F++E++ + + G++ E + + PG+
Sbjct: 156 PEIWQQTGGRITHFVSSMGTTGTITGVSEFMREQSKPVTIVGLQPEEGSSI----PGIR- 210
Query: 151 XXXXXXXXXPTVLDIKMLDEVKTVLLCHV--VTETTKRLALKGGLL 194
P + + ++DE VL H T + LA++ G+
Sbjct: 211 --RWPTEYLPGIFNASLVDE---VLDIHQRDAENTMRELAVREGIF 251
>pdb|2BHS|A Chain A, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|B Chain B, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|C Chain C, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|D Chain D, Crystal Structure Of Cysteine Synthase B
Length = 303
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 52/226 (23%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R A SMI +AE +G I PG +VL+E TS N GI LA IA+ +GY++ + MP+
Sbjct: 39 SVKDRAALSMIVEAEKRGEIKPG---DVLIEATSGNTGIALAMIAALKGYRMKLLMPDNM 95
Query: 68 SIQRR----------------------------MSKIPNAYLLQQHENPANP-------- 91
S +RR M+ LL Q NP NP
Sbjct: 96 SQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTG 155
Query: 92 -KIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLHL 150
+IW+ +GG+ V+ +F++E++ + + G++ E + + PG+
Sbjct: 156 PEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSI----PGIR- 210
Query: 151 XXXXXXXXXPTVLDIKMLDEVKTVLLCHV--VTETTKRLALKGGLL 194
P + + ++DE VL H T + LA++ G+
Sbjct: 211 --RWPTEYLPGIFNASLVDE---VLDIHQRDAENTMRELAVREGIF 251
>pdb|2V03|A Chain A, High Resolution Structure And Catalysis Of An O-
Acetylserine Sulfhydrylase
Length = 303
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 52/226 (23%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R A SMI +AE +G I PG +VL+E TS N GI LA IA+ +GY++ + MP+
Sbjct: 39 SVXDRAALSMIVEAEKRGEIKPG---DVLIEATSGNTGIALAMIAALKGYRMKLLMPDNM 95
Query: 68 SIQRR----------------------------MSKIPNAYLLQQHENPANP-------- 91
S +RR M+ LL Q NP NP
Sbjct: 96 SQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTG 155
Query: 92 -KIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLHL 150
+IW+ +GG+ V+ +F++E++ + + G++ E + + PG+
Sbjct: 156 PEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSI----PGIR- 210
Query: 151 XXXXXXXXXPTVLDIKMLDEVKTVLLCHV--VTETTKRLALKGGLL 194
P + + ++DE VL H T + LA++ G+
Sbjct: 211 --RWPTEYLPGIFNASLVDE---VLDIHQRDAENTMRELAVREGIF 251
>pdb|2JC3|A Chain A, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|B Chain B, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|C Chain C, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|D Chain D, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|E Chain E, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|F Chain F, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|G Chain G, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|H Chain H, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
Length = 303
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 48/224 (21%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R A SMI +AE +G I PG +VL+E TS N GI LA IA+ +GY++ + MP+
Sbjct: 39 SVKDRAALSMIVEAEKRGEIKPG---DVLIEATSGNTGIALAMIAALKGYRMKLLMPDNM 95
Query: 68 SIQRR----------------------------MSKIPNAYLLQQHENPAN--------- 90
S +RR MS+ LL Q NP N
Sbjct: 96 SQERRAAMRAYGAELILVTKEQGMEGARDLALAMSERGEGKLLDQFNNPDNPYAHYTTTG 155
Query: 91 PKIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLHL 150
P+IW+ + G+ V+ +FL+E+ + + G++ E + + PG+
Sbjct: 156 PEIWRQTSGRITHFVSSMGTTGTITGVSRFLREQEKPVTIVGLQPEEGSSI----PGIR- 210
Query: 151 XXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
P + + ++DEV + + T + LA++ G+
Sbjct: 211 --RWPAEYMPGIFNASLVDEVLDIHQ-NDAENTMRELAVREGIF 251
>pdb|1Y7L|A Chain A, O-Acetylserine Sulfhydrylase Complex
pdb|3IQG|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnwni
pdb|3IQH|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnydi
pdb|3IQI|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mneni
Length = 316
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 107/233 (45%), Gaps = 50/233 (21%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI +M+ AE G+++ GK+ +V+ TS N GI LA +A++RGYKI + MP T
Sbjct: 40 SVXCRIGANMVWQAEKDGTLTKGKE---IVDATSGNTGIALAYVAAARGYKITLTMPETM 96
Query: 68 SIQRR-----------------------------MSKIPNAY-LLQQHENPANPK----- 92
S++R+ ++ P+ Y +L+Q ENPANP+
Sbjct: 97 SLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRET 156
Query: 93 ----IWKDSGGKFDALVAXXXXXXXXXXAEKFLK-EKNLEMKVYGIESVESAVLNGG--- 144
IWKD+ GK D +VA + +K + ++ +E VES V++
Sbjct: 157 TGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAG 216
Query: 145 ---KPGLHLXXXXXXXXXPTVLDIKMLDEVKTVLLCHVVTETTKRLALKGGLL 194
KPG H P LD+ ++D V+TV T +RL + G+L
Sbjct: 217 EEVKPGPHKIQGIGAGFIPKNLDLSIIDRVETV-DSDTALATARRLMAEEGIL 268
>pdb|1M54|A Chain A, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|B Chain B, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|C Chain C, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|D Chain D, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|E Chain E, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|F Chain F, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
Length = 363
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 49/209 (23%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI+ MI+DAE G++ PG + ++E TS N GIGLA A+ RGY+ I+ MP
Sbjct: 74 SVKDRISLRMIEDAERDGTLKPG---DTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKM 130
Query: 68 SIQ--------------------------------RRMSKIPNAYLLQQHENPANP---- 91
S + R ++IPN+++L Q+ N +NP
Sbjct: 131 SSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY 190
Query: 92 -----KIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIES-----VESAVL 141
+I + GK D LVA + LKEK ++ G++ E L
Sbjct: 191 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEEL 250
Query: 142 NGGKPGLHLXXXXXXXXXPTVLDIKMLDE 170
N + + PTVLD ++D+
Sbjct: 251 NQTEQTTYEVEGIGYDFIPTVLDRTVVDK 279
>pdb|1JBQ|A Chain A, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|B Chain B, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|C Chain C, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|D Chain D, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|E Chain E, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|F Chain F, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
Length = 435
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 49/209 (23%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S RI+ MI+DAE G++ PG + ++E TS N GIGLA A+ RGY+ I+ MP
Sbjct: 139 SVKDRISLRMIEDAERDGTLKPG---DTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKM 195
Query: 68 SIQ--------------------------------RRMSKIPNAYLLQQHENPANP---- 91
S + R ++IPN+++L Q+ N +NP
Sbjct: 196 SSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY 255
Query: 92 -----KIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIES-----VESAVL 141
+I + GK D LVA + LKEK ++ G++ E L
Sbjct: 256 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEEL 315
Query: 142 NGGKPGLHLXXXXXXXXXPTVLDIKMLDE 170
N + + PTVLD ++D+
Sbjct: 316 NQTEQTTYEVEGIGYDFIPTVLDRTVVDK 344
>pdb|2PQM|A Chain A, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
pdb|2PQM|B Chain B, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
Length = 343
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 41/202 (20%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R+ +++ A G + PG + ++E TS N GI L + GY++ + MP+T
Sbjct: 56 SVKDRVGFNIVYQAIKDGRLKPGME---IIESTSGNTGIALCQAGAVFGYRVNIAMPSTM 112
Query: 68 SIQRRM---------------SKIPNA---------------YLLQQHENPANP------ 91
S++R+M +P A ++ Q NP N
Sbjct: 113 SVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYT 172
Query: 92 --KIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
+IW+D+ G+ D +V+ + LKEK +K+ +E ESAVL G G H
Sbjct: 173 ANEIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPH 232
Query: 150 LXXXXXXXXXPTVLDIKMLDEV 171
P + + +DE+
Sbjct: 233 GIQGIGAGFIPDIYKKEFVDEI 254
>pdb|3BM5|A Chain A, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
pdb|3BM5|B Chain B, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
Length = 338
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 41/202 (20%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R+ +++ A G + PG + ++E TS N GI L + GY++ + MP+T
Sbjct: 55 SVKDRVGFNIVYQAIKDGRLKPGME---IIESTSGNTGIALCQAGAVFGYRVNIAMPSTM 111
Query: 68 SIQRRM---------------SKIPNA---------------YLLQQHENPANP------ 91
S++R+M +P A ++ Q NP N
Sbjct: 112 SVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYT 171
Query: 92 --KIWKDSGGKFDALVAXXXXXXXXXXAEKFLKEKNLEMKVYGIESVESAVLNGGKPGLH 149
+IW+D+ G+ D +V+ + LKEK +K+ +E ESAVL G G H
Sbjct: 172 ANEIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPH 231
Query: 150 LXXXXXXXXXPTVLDIKMLDEV 171
P + + +DE+
Sbjct: 232 GIQGIGAGFIPDIYKKEFVDEI 253
>pdb|3PC2|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila
pdb|3PC3|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Aminoacrylate
pdb|3PC4|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Serine
Length = 527
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 35/116 (30%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPN-- 65
S RI M++DAE++G + PG ++E TS N GIGLA + +GYK I+ MP
Sbjct: 91 SVKDRIGYRMVQDAEEQGLLKPGY---TIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKM 147
Query: 66 ------------------------------TYSIQRRMSKIPNAYLLQQHENPANP 91
Y Q+ + PN+ +L Q+ N NP
Sbjct: 148 SNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNP 203
>pdb|3DWG|A Chain A, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
pdb|3DWG|B Chain B, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
Length = 325
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R A MI+ AE G + PG ++E TS N GI LA A +GY++I MP
Sbjct: 51 SIKDRPAVRMIEQAEADGLLRPGA---TILEPTSGNTGISLAMAARLKGYRLICVMPENT 107
Query: 68 SIQRR 72
S++RR
Sbjct: 108 SVERR 112
>pdb|3DWI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
pdb|3DWI|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
Length = 323
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R A MI+ AE G + PG ++E TS N GI LA A +GY++I MP
Sbjct: 49 SIKDRPAVRMIEQAEADGLLRPGA---TILEPTSGNTGISLAMAARLKGYRLICVMPENT 105
Query: 68 SIQRR 72
S++RR
Sbjct: 106 SVERR 110
>pdb|3DKI|A Chain A, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3DKI|B Chain B, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3FGP|A Chain A, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
pdb|3FGP|B Chain B, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
Length = 326
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 8 STPSRIACSMIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIASSRGYKIIVKMPNTY 67
S R A MI+ AE G + PG ++E TS N GI LA A +GY++I MP
Sbjct: 52 SIXDRPAVRMIEQAEADGLLRPGA---TILEPTSGNTGISLAMAARLKGYRLICVMPENT 108
Query: 68 SIQRR 72
S++RR
Sbjct: 109 SVERR 113
>pdb|3VSC|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Phospho-L-Serine
pdb|3VSC|B Chain B, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Phospho-L-Serine
pdb|3VSD|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Acetyl-L-Serine
pdb|3VSD|B Chain B, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Acetyl-L-Serine
Length = 389
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 34 NVLVEITSANAGIGLASIASSRGYKIIVKMPNTY-SIQRRMSKIPNAYLLQQHENPAN-- 90
+++ + TS+N G+ L+++A GY+ V +P + + ++ A ++ E P+
Sbjct: 146 SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVH 205
Query: 91 --PKIWKDS 97
P++ KDS
Sbjct: 206 LLPRVMKDS 214
>pdb|1WKV|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase
pdb|1WKV|B Chain B, Crystal Structure Of O-Phosphoserine Sulfhydrylase
pdb|3VSA|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase Without
Acetate
pdb|3VSA|B Chain B, Crystal Structure Of O-Phosphoserine Sulfhydrylase Without
Acetate
Length = 389
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 34 NVLVEITSANAGIGLASIASSRGYKIIVKMPNTY-SIQRRMSKIPNAYLLQQHENPAN-- 90
+++ + TS+N G+ L+++A GY+ V +P + + ++ A ++ E P+
Sbjct: 146 SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVH 205
Query: 91 --PKIWKDS 97
P++ KDS
Sbjct: 206 LLPRVMKDS 214
>pdb|3VA7|A Chain A, Crystal Structure Of The Kluyveromyces Lactis Urea
Carboxylase
Length = 1236
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 17 MIKDAEDKGSISPGKQYNVLVEITSANAGIGLASIAS 53
+IKDA++ ++ +Y V+V+ T+ GIGL + S
Sbjct: 165 LIKDAKEAKEVAKKLEYPVMVKSTAGGGGIGLQKVDS 201
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,109,672
Number of Sequences: 62578
Number of extensions: 168459
Number of successful extensions: 375
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 275
Number of HSP's gapped (non-prelim): 57
length of query: 194
length of database: 14,973,337
effective HSP length: 94
effective length of query: 100
effective length of database: 9,091,005
effective search space: 909100500
effective search space used: 909100500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 49 (23.5 bits)