Query 038952
Match_columns 234
No_of_seqs 137 out of 1253
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 04:54:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038952.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038952hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1397 Ca2+/H+ antiporter VCX 100.0 2.4E-41 5.1E-46 303.9 13.2 217 1-219 170-440 (441)
2 COG0387 ChaA Ca2+/H+ antiporte 100.0 9.7E-38 2.1E-42 281.4 16.0 212 1-216 110-368 (368)
3 PRK10599 calcium/sodium:proton 100.0 1.7E-35 3.6E-40 269.3 15.0 202 3-212 118-364 (366)
4 TIGR00378 cax calcium/proton e 100.0 4.6E-35 1E-39 267.1 16.2 212 1-213 93-349 (349)
5 TIGR00846 caca2 calcium/proton 100.0 3.1E-31 6.8E-36 243.2 16.9 210 1-213 111-365 (365)
6 PRK10734 putative calcium/sodi 99.9 7.3E-24 1.6E-28 191.8 14.3 196 22-218 73-322 (325)
7 COG0530 ECM27 Ca2+/Na+ antipor 99.9 3.1E-22 6.8E-27 180.6 15.2 192 22-214 80-319 (320)
8 TIGR00367 K+-dependent Na+/Ca+ 99.8 1.9E-20 4.1E-25 168.4 11.8 186 22-208 72-307 (307)
9 PRK10734 putative calcium/sodi 99.3 2.6E-12 5.6E-17 116.6 8.2 112 101-213 4-144 (325)
10 TIGR00367 K+-dependent Na+/Ca+ 99.2 5.5E-11 1.2E-15 107.1 7.9 113 102-215 4-145 (307)
11 COG0530 ECM27 Ca2+/Na+ antipor 99.1 2E-10 4.4E-15 104.0 8.0 122 97-219 7-157 (320)
12 TIGR00927 2A1904 K+-dependent 99.0 8.6E-10 1.9E-14 109.9 7.7 106 109-215 469-605 (1096)
13 PF01699 Na_Ca_ex: Sodium/calc 98.8 6.6E-09 1.4E-13 81.9 4.0 101 111-211 2-139 (140)
14 PLN03151 cation/calcium exchan 98.5 2.9E-07 6.3E-12 90.4 8.2 101 112-213 155-288 (650)
15 TIGR00927 2A1904 K+-dependent 98.4 1.4E-06 3E-11 87.5 9.5 113 103-216 936-1086(1096)
16 TIGR00845 caca sodium/calcium 98.2 3.7E-06 8E-11 84.9 7.1 71 98-169 752-840 (928)
17 TIGR00378 cax calcium/proton e 98.0 9.7E-06 2.1E-10 74.4 5.9 107 103-212 20-171 (349)
18 TIGR00846 caca2 calcium/proton 97.9 1.9E-05 4.1E-10 72.9 5.8 108 103-213 38-189 (365)
19 KOG1307 K+-dependent Ca2+/Na+ 97.8 4.2E-05 9.1E-10 71.7 5.6 110 103-213 427-575 (588)
20 KOG1307 K+-dependent Ca2+/Na+ 97.6 1.6E-05 3.4E-10 74.5 1.0 99 111-209 71-199 (588)
21 PLN03151 cation/calcium exchan 97.3 0.0025 5.5E-08 63.0 12.1 111 102-213 486-637 (650)
22 KOG2399 K+-dependent Na+:Ca2+ 96.8 0.013 2.7E-07 57.6 10.8 107 103-210 450-595 (605)
23 TIGR00845 caca sodium/calcium 96.0 0.027 5.9E-07 57.6 8.4 111 103-214 80-248 (928)
24 KOG2399 K+-dependent Na+:Ca2+ 94.3 0.23 5E-06 48.9 8.9 100 113-213 120-250 (605)
25 PF01699 Na_Ca_ex: Sodium/calc 92.6 0.18 3.8E-06 39.2 4.1 66 2-79 71-139 (140)
26 KOG1306 Ca2+/Na+ exchanger NCX 74.4 13 0.00028 36.0 7.3 50 117-167 443-510 (596)
27 PF10066 DUF2304: Uncharacteri 68.9 33 0.00071 26.2 7.4 61 63-135 5-65 (115)
28 PRK13499 rhamnose-proton sympo 63.3 1.2E+02 0.0025 28.1 11.0 116 25-143 102-219 (345)
29 PRK14750 kdpF potassium-transp 56.4 23 0.0005 20.6 3.3 24 60-83 2-25 (29)
30 COG0387 ChaA Ca2+/H+ antiporte 44.1 1.3E+02 0.0029 28.1 8.0 62 105-169 39-116 (368)
31 PRK14748 kdpF potassium-transp 39.8 62 0.0013 18.9 3.3 23 61-83 3-25 (29)
32 COG1971 Predicted membrane pro 34.1 2.9E+02 0.0063 23.4 8.5 59 24-84 33-91 (190)
33 PF09788 Tmemb_55A: Transmembr 33.6 74 0.0016 28.2 4.5 50 96-145 193-242 (256)
34 COG2456 Uncharacterized conser 30.5 2.6E+02 0.0056 21.7 6.6 73 61-145 10-82 (121)
35 COG4858 Uncharacterized membra 28.2 3.3E+02 0.0071 23.3 7.2 17 28-44 99-115 (226)
36 PF11381 DUF3185: Protein of u 27.6 44 0.00095 22.9 1.6 51 65-115 3-55 (59)
37 PF09125 COX2-transmemb: Cytoc 27.3 89 0.0019 19.3 2.8 20 65-84 19-38 (38)
38 COG2814 AraJ Arabinose efflux 24.0 1.8E+02 0.0039 27.4 5.6 47 95-142 8-55 (394)
39 PF02411 MerT: MerT mercuric t 23.8 3.5E+02 0.0075 20.9 10.3 18 30-47 16-33 (116)
40 PF01102 Glycophorin_A: Glycop 23.1 1E+02 0.0022 24.2 3.2 24 61-84 71-94 (122)
41 PF07331 TctB: Tripartite tric 23.1 3.4E+02 0.0075 20.6 10.2 26 59-84 35-60 (141)
42 PF11694 DUF3290: Protein of u 22.8 4.1E+02 0.0089 21.4 8.2 19 117-135 79-97 (149)
43 PF12263 DUF3611: Protein of u 22.3 4.7E+02 0.01 21.9 10.3 67 60-126 58-132 (183)
44 PF01914 MarC: MarC family int 21.9 4.8E+02 0.01 21.9 9.0 44 101-144 142-190 (203)
No 1
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-41 Score=303.89 Aligned_cols=217 Identities=52% Similarity=0.862 Sum_probs=195.1
Q ss_pred CcchhHhhhhhhccccccccc--cchHHHHHHHHHHHHHHHHHHHHhhhhcccccc----ccccchhhHHHHHHHHHHHH
Q 038952 1 LLVLGSAFFCGALVNAKREGA--SAVASVNSGLLLMAVMALLFLAVLLATHTELHF----EKSKLALSRFCSCAMLVAYA 74 (234)
Q Consensus 1 LLvlG~~~l~gg~r~~~~~~~--~~~~~~~~~lLiL~~~aLi~P~~~~~~~~~~~~----~~~~~~lS~~~giiLL~~y~ 74 (234)
|||+|+||+.||+| |++|. ++.+++++.+|.+++.+..+|+.+.++...... +.....+||..++++++.|+
T Consensus 170 LLvlG~s~~~Ggi~--rk~Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi 247 (441)
T KOG1397|consen 170 LLVLGLSLFCGGIR--RKDQRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYI 247 (441)
T ss_pred HHHhhHHHhhcccc--cceeecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHH
Confidence 68999999999998 46666 999999999999999999999999987764322 13467899999999999999
Q ss_pred HHHHHHHhhccc--ccC---------------ccCCcCcchHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhh
Q 038952 75 AYLYFQLKSQWQ--LCD---------------QEEIPEISKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFI 137 (234)
Q Consensus 75 ~yl~~~~~~~~~--~~~---------------~~~~~~~~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~I 137 (234)
+|++||+|+||+ .++ +||.|.+++|+++.||++.++.+.++||++|+++|+..+++|+|+.||
T Consensus 248 ~~L~FqL~t~~h~~~~~~~~ee~~~~d~~~s~~~e~p~is~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~Fi 327 (441)
T KOG1397|consen 248 AYLWFQLKTARHIWQFPTPDEEETEQDDEVSNEDEAPNISRWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFI 327 (441)
T ss_pred HHHHHhhhcccccCCCCCCChhcccccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhh
Confidence 999999999663 221 123456789999999999999999999999999999999999999999
Q ss_pred hhhhhhhccCh----HHHHHHHhCCC------------------cceeeeeeeecCCceeecccHHHHHHHHh-------
Q 038952 138 SIILLPIVGNA----GAIMFTMKDKL------------------VPFSIVIGRIMGRPIDLNLQLFETATLMI------- 188 (234)
Q Consensus 138 Gltivalvgts----tsi~aA~k~~~------------------~pilvvig~~~~~p~~l~~~~~~~~~l~~------- 188 (234)
|+|++|++||. ++|..|+|||+ .|..+++||.+++|+++.|+.+|+.++++
T Consensus 328 glillpiVgNaaEh~~AI~fA~k~kldLslgVaigsalQI~Lf~vP~~v~v~W~~g~~M~LnF~~~et~~l~isVfl~~y 407 (441)
T KOG1397|consen 328 GLILLPIVGNAAEHAGAISFAMKDKLDLSLGVAIGSALQIALFVVPFSVIVGWIMGISMDLNFPLLETACLFISVFLVAY 407 (441)
T ss_pred eeeeecccCchHHhhcceeeeecCcccchhhhhhhhhHhHHHhhhhHHHHhhhhcCCceEEeccHHHHHHHHHHHHHHHH
Confidence 99999999999 99999999998 89999999999999999999999866543
Q ss_pred --cCCccchHHHHHHHHHHHHHHHHHhcccCcc
Q 038952 189 --TEENSNYFKGLMLVFCYVIVAASFLVLEDPT 219 (234)
Q Consensus 189 --~~~~~~~~eG~~Ll~~Y~~~~~~~~~~~~~~ 219 (234)
+||+.||+||.+|+.+|++++++||++|+|+
T Consensus 408 ~lqdG~Sny~kG~mLll~Y~Iia~~Ff~~~~~~ 440 (441)
T KOG1397|consen 408 LLQDGKSNYFKGLMLLLCYLIIAAGFFVYNDPS 440 (441)
T ss_pred HHhcCchhHHHHHHHHHHHHHHHHHhhccCCCC
Confidence 9999999999999999999999999999986
No 2
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-38 Score=281.38 Aligned_cols=212 Identities=27% Similarity=0.425 Sum_probs=190.4
Q ss_pred CcchhHhhhhhhccccccccccchHHHHHHHHHHH-HHHHHHHHHhhhhccccccccccchhhHHHHHHHHHHHHHHHHH
Q 038952 1 LLVLGSAFFCGALVNAKREGASAVASVNSGLLLMA-VMALLFLAVLLATHTELHFEKSKLALSRFCSCAMLVAYAAYLYF 79 (234)
Q Consensus 1 LLvlG~~~l~gg~r~~~~~~~~~~~~~~~~lLiL~-~~aLi~P~~~~~~~~~~~~~~~~~~lS~~~giiLL~~y~~yl~~ 79 (234)
++++|+|+++||+||++|++|...+++++.+++++ +.+++.|+.++.+..+ .....+|+.++++++++|+.+++|
T Consensus 110 llv~GlslllGglr~~~Q~fN~~~a~~~~~~L~~~~~ialv~P~~~~~~~~~----~~~~~~s~~~avv~i~~Y~lfL~f 185 (368)
T COG0387 110 LLVVGLSLLLGGLRHKTQPFNPHGAGTYLALLFTAATIALVLPTFFPYTGGG----NFSLGQSLFVAVVLIALYGLFLFF 185 (368)
T ss_pred HHHHHHHHHHcchhhceeecchhhHHHHHHHHHHHHHHHhhhhhhhcccCCC----cchHhHHHHHHHHHHHHHHHHHHh
Confidence 57999999999999966666699999999999998 8999999999876532 344789999999999999999999
Q ss_pred HHhhcccccCc--------c-------CCcCcchHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhh
Q 038952 80 QLKSQWQLCDQ--------E-------EIPEISKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPI 144 (234)
Q Consensus 80 ~~~~~~~~~~~--------~-------~~~~~~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltival 144 (234)
|+|||++.|.+ | ++++++.+++..+|++++++++..||+++.+.|+..+++|.|+.|+|+++.|+
T Consensus 186 ql~tH~~~f~~~~~~e~~~ee~~~h~~~~~~~s~~~s~~vLl~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~l 265 (368)
T COG0387 186 QLKTHASLFWQVHEAEGEAEEDDPHHDDPSKWSVLLSTGVLLIATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAAL 265 (368)
T ss_pred hhhhhhhhhcccccccccCCCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 99999986621 1 11246888999999999999999999999999999999999999999999999
Q ss_pred ccCh----HHHHHHHhCCC------------------cceeeeeeeecCCceeecccHHHHHHHHh---------cCCcc
Q 038952 145 VGNA----GAIMFTMKDKL------------------VPFSIVIGRIMGRPIDLNLQLFETATLMI---------TEENS 193 (234)
Q Consensus 145 vgts----tsi~aA~k~~~------------------~pilvvig~~~~~p~~l~~~~~~~~~l~~---------~~~~~ 193 (234)
+|++ |++++|+|||+ .|.++++||..++|+++.+.++|+++++. .|||.
T Consensus 266 Vgn~~E~~tAi~aA~~~~mqls~nia~Gsalq~~lltiP~lvlis~~~gqpm~l~~~~~elV~l~~~v~~~~~~~sdG~s 345 (368)
T COG0387 266 VGNAPEHLTALRAALNNRMQLSMNIAMGSALQTALLTIPVLVLISLFTGQPLTLGFGPPELVLLVVTVFLANILFSDGRT 345 (368)
T ss_pred hccCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHHHHHHHHHHHHhcCCCch
Confidence 9898 99999999998 89999999999999999999999866543 99999
Q ss_pred chHHHHHHHHHHHHHHHHHhccc
Q 038952 194 NYFKGLMLVFCYVIVAASFLVLE 216 (234)
Q Consensus 194 ~~~eG~~Ll~~Y~~~~~~~~~~~ 216 (234)
||+||.++++.|++|+.++|++|
T Consensus 346 n~leG~~lL~lya~~~~~ff~~~ 368 (368)
T COG0387 346 NWLEGVVLLALYAIYAMLFFFPP 368 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999986
No 3
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=100.00 E-value=1.7e-35 Score=269.29 Aligned_cols=202 Identities=17% Similarity=0.261 Sum_probs=171.8
Q ss_pred chhHhhhhhhccccccccc-cchHHHHHHHHHHHHHHHHHHHHhhhhccccccccccchhhHHHHHHHHHHHHHHHHHHH
Q 038952 3 VLGSAFFCGALVNAKREGA-SAVASVNSGLLLMAVMALLFLAVLLATHTELHFEKSKLALSRFCSCAMLVAYAAYLYFQL 81 (234)
Q Consensus 3 vlG~~~l~gg~r~~~~~~~-~~~~~~~~~lLiL~~~aLi~P~~~~~~~~~~~~~~~~~~lS~~~giiLL~~y~~yl~~~~ 81 (234)
++|+|+++||+||+.|++| +..+++++.++.+++.++++|.++.. +......|+..+++++++|+.|++||+
T Consensus 118 ilGl~ll~GGlr~~eQ~fn~~ga~~~~~~ll~La~l~LvlP~~~~~-------~~~s~~~s~~~avv~lvlY~~fL~fQl 190 (366)
T PRK10599 118 LVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPG-------ANFSTGQALLVALISAAMYGVFLLIQT 190 (366)
T ss_pred HHHHHHHHhccccCeeecCHHhHHHHHHHHHHHHHHHHhcCcccCC-------CccchhHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999545555 45679999999999999999999642 123356799999999999999999999
Q ss_pred hhcccccCc------c-CCc---Cc---chHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh
Q 038952 82 KSQWQLCDQ------E-EIP---EI---SKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA 148 (234)
Q Consensus 82 ~~~~~~~~~------~-~~~---~~---~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts 148 (234)
++||+.|++ | +++ +. ..+.+..+|+++++.++..||.+++++|+..+++|+|+.|+|+++ |+++++
T Consensus 191 ~tHr~~F~~~~~~~~~~~~~~~~~~~~~~~~~s~~~L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvII-aiv~~a 269 (366)
T PRK10599 191 KTHQSLFVYEHEDEGDDDDPHHGKPSAHSSLWHAIWLIIHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLV-ALLILS 269 (366)
T ss_pred cchHHHhccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHH-HHHHcc
Confidence 999987741 1 111 11 122356889999999999999999999999999999999999886 888998
Q ss_pred ----HHHHHHHhCCC------------------cceeeeeeeecCCceeecccHHHHHHHHh---------cCCccchHH
Q 038952 149 ----GAIMFTMKDKL------------------VPFSIVIGRIMGRPIDLNLQLFETATLMI---------TEENSNYFK 197 (234)
Q Consensus 149 ----tsi~aA~k~~~------------------~pilvvig~~~~~p~~l~~~~~~~~~l~~---------~~~~~~~~e 197 (234)
|++++|+|||+ .|.++++||.+++|+++.|++++++++++ .|||.||+|
T Consensus 270 pE~~tAV~aA~kNkmq~slnialGSsLq~illtvP~lvlig~~~g~pm~L~f~~~e~vlL~ltv~v~~~t~~dGrsN~Le 349 (366)
T PRK10599 270 PEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFLTGNELQFGLGAPEMVVMVASLVLCHISFSTGRTNVLN 349 (366)
T ss_pred hhHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCHHHHHHHHHHHHHHHhccCCCchHHHH
Confidence 99999999998 89999999999999999999999876543 899999999
Q ss_pred HHHHHHHHHHHHHHH
Q 038952 198 GLMLVFCYVIVAASF 212 (234)
Q Consensus 198 G~~Ll~~Y~~~~~~~ 212 (234)
|.+++++|+.|....
T Consensus 350 G~~hL~lf~~y~~l~ 364 (366)
T PRK10599 350 GAAHLALFAAYLMTI 364 (366)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999997654
No 4
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=100.00 E-value=4.6e-35 Score=267.12 Aligned_cols=212 Identities=34% Similarity=0.563 Sum_probs=175.3
Q ss_pred CcchhHhhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccccccccccchhhHHHHHHHHHHHHHHHHHH
Q 038952 1 LLVLGSAFFCGALVNAKREGASAVASVNSGLLLMAVMALLFLAVLLATHTELHFEKSKLALSRFCSCAMLVAYAAYLYFQ 80 (234)
Q Consensus 1 LLvlG~~~l~gg~r~~~~~~~~~~~~~~~~lLiL~~~aLi~P~~~~~~~~~~~~~~~~~~lS~~~giiLL~~y~~yl~~~ 80 (234)
||++|+|+++||+|+++|..+++.++.+..++++++.++++|+.++......+ +.....+||.+|++++++|++|++||
T Consensus 93 lLilGls~liggl~~~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~-~~~~~~ls~~~aiill~lY~~~L~~~ 171 (349)
T TIGR00378 93 LLVLGLCFFFGGLNYKQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGKE-DGKILNLSRGTSIVIIIVYVLFLYFQ 171 (349)
T ss_pred HHHHHHHHHHhccccceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCcc-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999844444477788888899999999999977542211100 12335799999999999999999999
Q ss_pred HhhcccccCc--------cCC------cCcchHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhcc
Q 038952 81 LKSQWQLCDQ--------EEI------PEISKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVG 146 (234)
Q Consensus 81 ~~~~~~~~~~--------~~~------~~~~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvg 146 (234)
+|+||+.|++ +++ ++.+.++++.++++++++++++||++|++++++++.+|+||.++|+|++|+++
T Consensus 172 l~~h~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~v~i~~~a~~lv~~~~~~~~~~gi~~~~igl~iva~~t 251 (349)
T TIGR00378 172 LGTHHALYEQQEAETDEVMETIERNPHHSLSVKSSTVVLLGTTVIVAFCSEFLVGTIDNVVESTGLSKLFIGVIVIPIVG 251 (349)
T ss_pred hhhHHHHhCCcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 9999864321 110 12456778888999999999999999999999999999999999999999954
Q ss_pred Ch----HHHHHHHhCCC------------------cceeeeeeeecCCceeecccHHHHHHHHh---------cCCccch
Q 038952 147 NA----GAIMFTMKDKL------------------VPFSIVIGRIMGRPIDLNLQLFETATLMI---------TEENSNY 195 (234)
Q Consensus 147 ts----tsi~aA~k~~~------------------~pilvvig~~~~~p~~l~~~~~~~~~l~~---------~~~~~~~ 195 (234)
+. +++++|+|||. .|+++++||.+++|+++.|+.+|+..+++ +|+|+||
T Consensus 252 slpE~~~ai~aa~~~~~~~ai~~~~GS~i~~~l~v~p~lvl~~~~~~~~~~L~f~~~~~~~l~~~v~~~~~~~~dg~~n~ 331 (349)
T TIGR00378 252 NAAEHATAVLVAMKDKMDLALGVAIGSSLQIALFVAPVLVIVGWMIDVPMTLNFSTFELVALFIAVLLSNYISLDGESNW 331 (349)
T ss_pred ccHHHHHHHHHHHcCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHhCCCceecCcHHHHHHHHHHHHHHHHHHhCCCCcH
Confidence 54 99999999998 79999999999999999999988654432 9999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 038952 196 FKGLMLVFCYVIVAASFL 213 (234)
Q Consensus 196 ~eG~~Ll~~Y~~~~~~~~ 213 (234)
+||.+|+++|++++++||
T Consensus 332 leG~~ll~~Y~i~~~~f~ 349 (349)
T TIGR00378 332 LEGVMLLAMYIIIAMAFF 349 (349)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999999999999987
No 5
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=99.97 E-value=3.1e-31 Score=243.18 Aligned_cols=210 Identities=39% Similarity=0.620 Sum_probs=166.5
Q ss_pred CcchhHhhhhhhcccc-ccccccchHHHHHHHHHHHHHHHHHHHHhhhhccccccccccchhhHHHHHHHHHHHHHHHHH
Q 038952 1 LLVLGSAFFCGALVNA-KREGASAVASVNSGLLLMAVMALLFLAVLLATHTELHFEKSKLALSRFCSCAMLVAYAAYLYF 79 (234)
Q Consensus 1 LLvlG~~~l~gg~r~~-~~~~~~~~~~~~~~lLiL~~~aLi~P~~~~~~~~~~~~~~~~~~lS~~~giiLL~~y~~yl~~ 79 (234)
++++|+|+++||+|+. +|..+++.++....++.+++..+++|..+...... .+....+||.+|++++++|++|++|
T Consensus 111 lLIlGl~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~---~~~~~~ls~~~giill~ly~~yl~~ 187 (365)
T TIGR00846 111 LLVLGLSLFLGGIKNIREQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPG---QDSILGLSRGIAIVMLILYGAFLVF 187 (365)
T ss_pred HHHHHHHHHHhccCccceeeccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCC---cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999962 23334666777778889999999999876432211 1244579999999999999999999
Q ss_pred HHhhcccccC----c-----cC--Cc--CcchHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhcc
Q 038952 80 QLKSQWQLCD----Q-----EE--IP--EISKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVG 146 (234)
Q Consensus 80 ~~~~~~~~~~----~-----~~--~~--~~~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvg 146 (234)
++|+||+.++ + |+ ++ +.+.++++.++++++++++.+||++|++++++++.+|+||.++|+|++|+++
T Consensus 188 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~l~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~t 267 (365)
T TIGR00846 188 QLVTHRQLFEPQEEADSDYDDEVHEEPTVISPWSAAAWLVGATIVVALLAEYLVDTIESAVESWGLSVAFIGVILAPIVG 267 (365)
T ss_pred HhccchhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 9999986431 1 11 11 2456788999999999999999999999999999999999999999999944
Q ss_pred Ch----HHHHHHHhCCC------------c------ceeeeeeeecCCceeecccHHHHHHHHh---------cCCccch
Q 038952 147 NA----GAIMFTMKDKL------------V------PFSIVIGRIMGRPIDLNLQLFETATLMI---------TEENSNY 195 (234)
Q Consensus 147 ts----tsi~aA~k~~~------------~------pilvvig~~~~~p~~l~~~~~~~~~l~~---------~~~~~~~ 195 (234)
+. +++.||+|||. + |+..+++|..++|+++.++.+|..++.+ .|+|++|
T Consensus 268 slpE~~~si~aa~~g~~~lavg~~iGSni~n~l~vl~~~~li~~~~~~~~~l~~~~~~~~~l~~s~~~~~~~~~~~~~~~ 347 (365)
T TIGR00846 268 NAAEHAGAVIAAFKNKLDIALGVALGSALQIALFVVPVVVLVAWMLGIPMDLNFGAPETVALALSVFLTTITLQDGRSNY 347 (365)
T ss_pred ccHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeccCcHHHHHHHHHHHHHHHHHHcCCcCcH
Confidence 44 99999999998 4 4445555555778888888886533321 7999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 038952 196 FKGLMLVFCYVIVAASFL 213 (234)
Q Consensus 196 ~eG~~Ll~~Y~~~~~~~~ 213 (234)
.||.+|+++|++|+.++|
T Consensus 348 ~eG~~ll~~Y~~~~~~~~ 365 (365)
T TIGR00846 348 LEGAVLLALYIIIAMLFF 365 (365)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999999999999886
No 6
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.91 E-value=7.3e-24 Score=191.80 Aligned_cols=196 Identities=16% Similarity=0.150 Sum_probs=147.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhccccccc------------cccchhhHHHHHHHHHHHHHHHHHHHhhcccccC
Q 038952 22 SAVASVNSGLLLMAVMALLFLAVLLATHTELHFE------------KSKLALSRFCSCAMLVAYAAYLYFQLKSQWQLCD 89 (234)
Q Consensus 22 ~~~~~~~~~lLiL~~~aLi~P~~~~~~~~~~~~~------------~~~~~lS~~~giiLL~~y~~yl~~~~~~~~~~~~ 89 (234)
--.+++.|+++++|+.+++.|...+++..+++.. ..++.++|.+|++++++|+.|++|++|+||+..+
T Consensus 73 ilGSni~ni~lilg~~~l~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~g~~ll~~~~~yl~~~~~~~~~~~~ 152 (325)
T PRK10734 73 ALGSNITNILLILGLAALIRPFTVHSDVLRRELPLMLLVSVLAGSVLYDGQLSRSDGIFLLLLAVLWLLFIVKIARLAER 152 (325)
T ss_pred hhhHHHHHHHHHHHHHHHhCCcccChHHHHHHHHHHHHHHHHHHHHHHCCcCcHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4456778888888988888887666554444421 1456789999999999999999999987753211
Q ss_pred ---c----cC--C-cC-cchHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHH
Q 038952 90 ---Q----EE--I-PE-ISKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMF 153 (234)
Q Consensus 90 ---~----~~--~-~~-~~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~a 153 (234)
+ |+ + ++ .+.++...+++++++++.++|+++|++++.+++.+|+||.++|+|++|+ ||| +++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~l~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~-gtslPE~~~sv~a 231 (325)
T PRK10734 153 QGNDSLTREQLAELPREGGLPVAFLWLGIALIIMPMATRMVIDNATVLANYFAISELTIGLTVIAI-GTSLPELATAIAG 231 (325)
T ss_pred ccccccchhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 1 11 1 11 1455678889999999999999999999999999999999999999999 676 99999
Q ss_pred HHhCCC------------cceeeeeeee-cCCce-------eecccHHHHHH--H--H-h-cCCccchHHHHHHHHHHHH
Q 038952 154 TMKDKL------------VPFSIVIGRI-MGRPI-------DLNLQLFETAT--L--M-I-TEENSNYFKGLMLVFCYVI 207 (234)
Q Consensus 154 A~k~~~------------~pilvvig~~-~~~p~-------~l~~~~~~~~~--l--~-~-~~~~~~~~eG~~Ll~~Y~~ 207 (234)
++||+. +|+++++|.. ...|. ..++..+.... + . . +|+|++|.||.+|+.+|+.
T Consensus 232 ~~~g~~~~avgniiGsnifni~~~lg~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~G~~Ll~~Y~~ 311 (325)
T PRK10734 232 ARKGENDIAVGNIIGSNIFNIVIVLGLPALISPGEINPLAFSRDYWVMLLVSVIFALLCWRRKRRIGRGAGALLLGGFIV 311 (325)
T ss_pred HHcCCCchHHHHHHhHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHcCCccChHHHHHHHHHHHH
Confidence 999998 7888777654 22332 22222111111 1 1 1 6789999999999999999
Q ss_pred HHHHHhcccCc
Q 038952 208 VAASFLVLEDP 218 (234)
Q Consensus 208 ~~~~~~~~~~~ 218 (234)
|+...|++|+-
T Consensus 312 y~~~l~~~~~~ 322 (325)
T PRK10734 312 WLAMLYWLSPI 322 (325)
T ss_pred HHHHHHhcCcc
Confidence 99999988863
No 7
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.89 E-value=3.1e-22 Score=180.58 Aligned_cols=192 Identities=21% Similarity=0.247 Sum_probs=157.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhccccccc------------cccchhhHHHHHHHHHHHHHHHHHHHhhcccccC
Q 038952 22 SAVASVNSGLLLMAVMALLFLAVLLATHTELHFE------------KSKLALSRFCSCAMLVAYAAYLYFQLKSQWQLCD 89 (234)
Q Consensus 22 ~~~~~~~~~lLiL~~~aLi~P~~~~~~~~~~~~~------------~~~~~lS~~~giiLL~~y~~yl~~~~~~~~~~~~ 89 (234)
.-.+...|+.+++|..+++.|...++...++|.. ..+++++|.+|+.++..|+.|++|.+|++|+..+
T Consensus 80 vlGSni~ni~li~gl~ali~~~~~~~~~~~r~~~f~ll~~~~~~~~~~~~~~~~~~gi~ll~l~~~yl~~~~~~~~~~~~ 159 (320)
T COG0530 80 VLGSNIFNILLILGLAALIAPLKVDSDVLRREIPFLLLATLILLLVLLDGHLSRLDGIVLLLLYVLYLYYLLKLSREAEE 159 (320)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhHhhhhHHHHhhHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence 4578899999999999999999999887777642 3678899999999999999999999998876544
Q ss_pred c--c--CCc-CcchHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCCC
Q 038952 90 Q--E--EIP-EISKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDKL 159 (234)
Q Consensus 90 ~--~--~~~-~~~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~~ 159 (234)
+ + |.+ +.+..+..++++++.+.+.+++|++|++++++|+.+|+||.++|+|++|+ ||| +++.++||||.
T Consensus 160 ~~~~~~e~~~~~~~~~~~~~~~~~~~~l~~g~~llv~~~~~iA~~~gi~e~~igltivai-gTSlPElv~si~a~rkg~~ 238 (320)
T COG0530 160 PGEQENERPKKGSLRKALLVLVIGLILLVVGSELLVDGAVEIAEIFGISELIIGLTIVAI-GTSLPELVVSIVAARKGED 238 (320)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH-HcccHHHHHHHHHHHcCCC
Confidence 2 1 222 45778899999999999999999999999999999999999999999999 888 99999999998
Q ss_pred ------------cceeeeeeee-cCCce-----eecccHHHHH----HH--H--hcCCccchHHHHHHHHHHHHHHHHHh
Q 038952 160 ------------VPFSIVIGRI-MGRPI-----DLNLQLFETA----TL--M--ITEENSNYFKGLMLVFCYVIVAASFL 213 (234)
Q Consensus 160 ------------~pilvvig~~-~~~p~-----~l~~~~~~~~----~l--~--~~~~~~~~~eG~~Ll~~Y~~~~~~~~ 213 (234)
+|+++++|.. ..+|. .+..+...+. .+ . .+++|++|.||..++..|..|....+
T Consensus 239 ~iavGnviGSni~n~~~~lGi~~~~~~~~~~~~~~~~~~~vmi~~~l~l~l~~~~~~~~i~r~~g~~ll~~Y~~~~~~~~ 318 (320)
T COG0530 239 DIAVGNVIGSNIFNILIVLGISALIGPITVEPSALLVDAPVLILVTLLLLLFLARRRRRIGRKEGLLLLGLYIVYVALLI 318 (320)
T ss_pred CeEEeeecchHHHHHHHHHhHHHhccccccCchhHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHh
Confidence 8999999876 34552 2223332221 11 1 17899999999999999999987654
Q ss_pred c
Q 038952 214 V 214 (234)
Q Consensus 214 ~ 214 (234)
+
T Consensus 319 ~ 319 (320)
T COG0530 319 L 319 (320)
T ss_pred h
Confidence 3
No 8
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.83 E-value=1.9e-20 Score=168.36 Aligned_cols=186 Identities=20% Similarity=0.228 Sum_probs=138.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhccccccc------------cccchhhHHHHHHHHHHHHHHHHHHHhhcccccC
Q 038952 22 SAVASVNSGLLLMAVMALLFLAVLLATHTELHFE------------KSKLALSRFCSCAMLVAYAAYLYFQLKSQWQLCD 89 (234)
Q Consensus 22 ~~~~~~~~~lLiL~~~aLi~P~~~~~~~~~~~~~------------~~~~~lS~~~giiLL~~y~~yl~~~~~~~~~~~~ 89 (234)
--.+...|.++++|+++++.|...+.....+|.. ..++.++|.+|+++++.|++|++++.++||+..+
T Consensus 72 ilGS~l~n~l~i~g~~~l~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~g~i~~~~gi~ll~~Yv~yl~~~~~~~~~~~~ 151 (307)
T TIGR00367 72 VIGSNIFNILLILGLSAIFSPIIVDTDWLRRDFSFYLLVSILLLFFGLDGPISRLDGVVLLFLYVVYLLFLVKVERQMIN 151 (307)
T ss_pred hhhHHHHHHHHHHHHHHhhcceeechHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4446777888888888888776554443333321 2456799999999999999999999988773211
Q ss_pred c----c---C-CcCcchHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHh
Q 038952 90 Q----E---E-IPEISKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMK 156 (234)
Q Consensus 90 ~----~---~-~~~~~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k 156 (234)
| + + +++.+.|+.+.+++++.+++..+|+.+|++++.+++.+|+||.++|+|++|+ +|+ +++.+++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~-~ts~PE~~~~i~a~~~ 230 (307)
T TIGR00367 152 DTYTEEQLDENNRRKQIFFLIVLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKIIGLTLLAI-GTSLPELVVSVAAARK 230 (307)
T ss_pred cccchhhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH-HcccHHHHHHHHHHHc
Confidence 1 1 1 1123567888999999999999999999999999999999999999999999 666 89999999
Q ss_pred CCC------------cceeeeeeee-cCCceee-----cccHHHHH--H----HH-hcCCccchHHHHHHHHHHHHH
Q 038952 157 DKL------------VPFSIVIGRI-MGRPIDL-----NLQLFETA--T----LM-ITEENSNYFKGLMLVFCYVIV 208 (234)
Q Consensus 157 ~~~------------~pilvvig~~-~~~p~~l-----~~~~~~~~--~----l~-~~~~~~~~~eG~~Ll~~Y~~~ 208 (234)
|+. +|.++++|.. ...|... ..|...+. . +. .+|+|++|+||..|+.+|+.|
T Consensus 231 g~~~~avg~~iGs~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~l~~~Y~~y 307 (307)
T TIGR00367 231 GLGDIAVGNVIGSNIFNILVGLGVPSLFYPIPVEPLAYSLDAPVMVIVTLVLMLVFKTSMKLGRWEGFLLLALYIAY 307 (307)
T ss_pred CCCchHHHHHhhhHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHhcCeehHHHHHHHHHHHHhC
Confidence 987 7888877764 2333222 12221111 0 11 178999999999999999876
No 9
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.34 E-value=2.6e-12 Score=116.58 Aligned_cols=112 Identities=13% Similarity=0.213 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCCC------------ccee
Q 038952 101 SIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDKL------------VPFS 163 (234)
Q Consensus 101 ~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~~------------~pil 163 (234)
.+.++++|+.++..++|++|++++.+|+++|+||.++|+|++|+ ||| +++.|+++|+. +|++
T Consensus 4 ~~~~~~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~-gTSlPEl~vsv~A~~~g~~~ia~GnilGSni~ni~ 82 (325)
T PRK10734 4 ATALLIIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGI-GTSLPEIIVSVAASLHGQRDLAVGTALGSNITNIL 82 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH-HcchhHHHHHHHHHHcCCCcchhhhhhhHHHHHHH
Confidence 45678899999999999999999999999999999999999999 777 99999999987 8999
Q ss_pred eeeeee-cCCceeecccHH--H---H-H-H--H--HhcCCccchHHHHHHHHHHHHHHHHHh
Q 038952 164 IVIGRI-MGRPIDLNLQLF--E---T-A-T--L--MITEENSNYFKGLMLVFCYVIVAASFL 213 (234)
Q Consensus 164 vvig~~-~~~p~~l~~~~~--~---~-~-~--l--~~~~~~~~~~eG~~Ll~~Y~~~~~~~~ 213 (234)
+++|.. ..+|+..+.+.+ + + . . + ...|++++|.+|.+++..|+.|....+
T Consensus 83 lilg~~~l~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~g~~ll~~~~~yl~~~~ 144 (325)
T PRK10734 83 LILGLAALIRPFTVHSDVLRRELPLMLLVSVLAGSVLYDGQLSRSDGIFLLLLAVLWLLFIV 144 (325)
T ss_pred HHHHHHHHhCCcccChHHHHHHHHHHHHHHHHHHHHHHCCcCcHHHHHHHHHHHHHHHHHHH
Confidence 988865 456665543321 1 1 1 1 1 117899999999999999999987644
No 10
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.18 E-value=5.5e-11 Score=107.08 Aligned_cols=113 Identities=15% Similarity=0.270 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCCC------------cceee
Q 038952 102 IIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDKL------------VPFSI 164 (234)
Q Consensus 102 ~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~~------------~pilv 164 (234)
+.+++++.+++..++|+++++++.+++++|+||.++|+|++|+ ||+ +++.|+++|+. +|+++
T Consensus 4 ~~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~-gtslPEl~~si~a~~~g~~~la~g~ilGS~l~n~l~ 82 (307)
T TIGR00367 4 IGYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAI-GTSLPELFTSLIASLIGQPDIGVGNVIGSNIFNILL 82 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH-HcccHHHHHHHHHHhcCCCCeehhhhhhHHHHHHHH
Confidence 4567789999999999999999999999999999999999999 665 99999999987 88888
Q ss_pred eeeee-cCCceeecccH--HHH-----HH--H--HhcCCccchHHHHHHHHHHHHHHHHHhcc
Q 038952 165 VIGRI-MGRPIDLNLQL--FET-----AT--L--MITEENSNYFKGLMLVFCYVIVAASFLVL 215 (234)
Q Consensus 165 vig~~-~~~p~~l~~~~--~~~-----~~--l--~~~~~~~~~~eG~~Ll~~Y~~~~~~~~~~ 215 (234)
++|.. ...|+..+.+. .+. .. + +..|++++|.||.+++..|++|....+..
T Consensus 83 i~g~~~l~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~g~i~~~~gi~ll~~Yv~yl~~~~~~ 145 (307)
T TIGR00367 83 ILGLSAIFSPIIVDTDWLRRDFSFYLLVSILLLFFGLDGPISRLDGVVLLFLYVVYLLFLVKV 145 (307)
T ss_pred HHHHHHhhcceeechHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 88765 34465444321 111 10 1 11788999999999999999998766543
No 11
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.10 E-value=2e-10 Score=104.00 Aligned_cols=122 Identities=14% Similarity=0.234 Sum_probs=98.0
Q ss_pred chHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCCC------------
Q 038952 97 SKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDKL------------ 159 (234)
Q Consensus 97 ~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~~------------ 159 (234)
..+..+..++.++.+++.+||+++++++.+++++|+||.++|.|++|+ +|| +++.|+.+|+.
T Consensus 7 ~~~~~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~-gTslPE~~vs~~a~l~g~~~iavGnvlGSni 85 (320)
T COG0530 7 MLLLLILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAF-GTSLPELAVSLVAALSGNPDIAVGNVLGSNI 85 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH-HccChHHHHHHHHHHcCCCCeeeehhhhHHH
Confidence 456677888999999999999999999999999999999999999999 777 89999999987
Q ss_pred cceeeeeeee-cCCceeecc-----cHHHH----HHH--HhcCCccchHHHHHHHHHHHHHHHHHhcccCcc
Q 038952 160 VPFSIVIGRI-MGRPIDLNL-----QLFET----ATL--MITEENSNYFKGLMLVFCYVIVAASFLVLEDPT 219 (234)
Q Consensus 160 ~pilvvig~~-~~~p~~l~~-----~~~~~----~~l--~~~~~~~~~~eG~~Ll~~Y~~~~~~~~~~~~~~ 219 (234)
+|+.++.|+. ..+|...+. |.+.+ +.+ ...+++.+|.+|..++.+|+.|..-.+..+..+
T Consensus 86 ~ni~li~gl~ali~~~~~~~~~~~r~~~f~ll~~~~~~~~~~~~~~~~~~gi~ll~l~~~yl~~~~~~~~~~ 157 (320)
T COG0530 86 FNILLILGLAALIAPLKVDSDVLRREIPFLLLATLILLLVLLDGHLSRLDGIVLLLLYVLYLYYLLKLSREA 157 (320)
T ss_pred HHHHHHHHHHHHHhhhHhhhhHHHHhhHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 8999998876 344443332 22111 111 128999999999999999999998877766444
No 12
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=98.99 E-value=8.6e-10 Score=109.87 Aligned_cols=106 Identities=14% Similarity=0.278 Sum_probs=81.4
Q ss_pred HHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCCC------------cceeeeeeee-c
Q 038952 109 TNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDKL------------VPFSIVIGRI-M 170 (234)
Q Consensus 109 ~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~~------------~pilvvig~~-~ 170 (234)
.++...+++++|.+++.+++.+|+||.++|+|++|+ ||| +++.++++++. +|+++++|.. +
T Consensus 469 v~LaIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAf-GTSAPELfTSLiAv~~g~sDIGVGNIVGSnIFNILLVLGl~aL 547 (1096)
T TIGR00927 469 VALAIVCDEYFVPALGVITDKLQISEDVAGATFMAA-GGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCAL 547 (1096)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhCCcHhhhheeeeee-ecCcHHHHHHHHHHHcCCCcceehhhHhHHHHHHHHHHhhhee
Confidence 444567889999999999999999999999999999 777 99999988776 9999998875 3
Q ss_pred CCc--eeec-----ccH--H--HHHHH--HhcCCccchHHHHHHHHHHHHHHHHHhcc
Q 038952 171 GRP--IDLN-----LQL--F--ETATL--MITEENSNYFKGLMLVFCYVIVAASFLVL 215 (234)
Q Consensus 171 ~~p--~~l~-----~~~--~--~~~~l--~~~~~~~~~~eG~~Ll~~Y~~~~~~~~~~ 215 (234)
..+ +.++ -|. + ...++ ++.|++++|+||++|+++|++|.+..++-
T Consensus 548 is~~~l~Ld~~~L~RDllFyILAv~lLilf~lDG~Itr~EgIILLlLYiiYVvvm~~n 605 (1096)
T TIGR00927 548 FSREILNLTWWPLFRDVSFYILDLMMLILFFLDSLIAWWESLLLLLAYALYVFTMKWN 605 (1096)
T ss_pred eccccccccccceehhHHHHHHHHHHHHHHHhCCeEcHHHHHHHHHHHHHHHHHHHHh
Confidence 333 2221 122 1 11112 22889999999999999999998665554
No 13
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=98.76 E-value=6.6e-09 Score=81.95 Aligned_cols=101 Identities=23% Similarity=0.421 Sum_probs=70.6
Q ss_pred HHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh----HHHHHHHhCCC------------cceeeeeeee-cCCc
Q 038952 111 WISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA----GAIMFTMKDKL------------VPFSIVIGRI-MGRP 173 (234)
Q Consensus 111 ~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts----tsi~aA~k~~~------------~pilvvig~~-~~~p 173 (234)
++..+|+.++++++.+++.+|+||.++|.+++|++++. +++.+++||+. +|.++..|.. ...+
T Consensus 2 ~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la~~~~~Gs~~~~~~l~~gl~~l~~~ 81 (140)
T PF01699_consen 2 LIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLAIGNIIGSNIFNITLIVGLILLFGP 81 (140)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHTHHHHHHHHS-
T ss_pred EehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchhhhcccchHHHHHHHHHHHHHHhcc
Confidence 56889999999999999999999999999999994444 89999999987 6666666543 1122
Q ss_pred ee-----ecc-------cHHHHHHHHh----c----CCccchHHHHHHHHHHHHHHHH
Q 038952 174 ID-----LNL-------QLFETATLMI----T----EENSNYFKGLMLVFCYVIVAAS 211 (234)
Q Consensus 174 ~~-----l~~-------~~~~~~~l~~----~----~~~~~~~eG~~Ll~~Y~~~~~~ 211 (234)
.. .+. .......+.. . ++|.+|.+|.+++.+|+.|.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~ 139 (140)
T PF01699_consen 82 IKLGSQTIDWSSFTRDFSFLLLAILLLILFFLAFIRDGRISRFEGLVLLILYILYLVF 139 (140)
T ss_dssp B---------HHHHHHHHHHHHHHHHHHHCCT---HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCeEhHHHHHHHHHHHHHHHhc
Confidence 11 111 1111111111 3 8999999999999999999864
No 14
>PLN03151 cation/calcium exchanger; Provisional
Probab=98.51 E-value=2.9e-07 Score=90.41 Aligned_cols=101 Identities=20% Similarity=0.318 Sum_probs=76.8
Q ss_pred HHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHh-CCC------------cceeeeeeee-c--
Q 038952 112 ISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMK-DKL------------VPFSIVIGRI-M-- 170 (234)
Q Consensus 112 l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k-~~~------------~pilvvig~~-~-- 170 (234)
-..++++++.+.+.+++.+++||.++|+|++|+ ||+ +++.|+.+ ++. +|.++++|.. .
T Consensus 155 ~~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAf-GNsaPDlf~si~a~~~~~~~~l~ig~ilGs~lf~~~vV~G~v~l~~ 233 (650)
T PLN03151 155 GNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPL-GNGAPDVFASIAAFVGKDAGEVGLNSVLGGAVFVTCVVVGIVSLCV 233 (650)
T ss_pred HHHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHH-hCCcHHHHHHHHHHHcCCCCceeeehhhhHHHHHHHHHHHHHHHhc
Confidence 357899999999999999999999999999999 787 88877665 322 8888888876 2
Q ss_pred -CCceeecccH--HH----HH---HH--HhcCCccchHHHHHHHHHHHHHHHHHh
Q 038952 171 -GRPIDLNLQL--FE----TA---TL--MITEENSNYFKGLMLVFCYVIVAASFL 213 (234)
Q Consensus 171 -~~p~~l~~~~--~~----~~---~l--~~~~~~~~~~eG~~Ll~~Y~~~~~~~~ 213 (234)
.+|+.++-.. .| ++ .+ ++.+++++++||+.++.+|++|.....
T Consensus 234 ~~~pf~v~~~~f~RD~~F~lla~~~l~~~l~~g~v~~~eai~ll~lY~~Yv~vv~ 288 (650)
T PLN03151 234 ADKEVQIDKRCFIRDLCFFLFTLVSLLVILMVGKVTVGGAIAFVSIYVVYAFLVA 288 (650)
T ss_pred cCCceeecchhHHHhHHHHHHHHHHHHHHHHcCeEhHHHHHHHHHHHHHHHHHHH
Confidence 2466554221 11 11 11 128999999999999999999985443
No 15
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=98.39 E-value=1.4e-06 Score=87.47 Aligned_cols=113 Identities=15% Similarity=0.244 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCCC------------cceeee
Q 038952 103 IWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDKL------------VPFSIV 165 (234)
Q Consensus 103 ~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~~------------~pilvv 165 (234)
+.++.+++.+.+.+.++|+.+..+...+|+|+.++|+|++|+ ||| +++.+|+||.. ||+++.
T Consensus 936 ltFi~SIiwIsi~SyilV~~at~IG~vlGIse~VmGlTfLA~-GTSIPDlisSvivArkG~gdMAVan~iGSNIFnIllg 1014 (1096)
T TIGR00927 936 ITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAA-GTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVG 1014 (1096)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhhhhhhhhh-hcccHHHHHHHHHHHccCCcceeeeccccchheeeee
Confidence 446677788899999999999999999999999999999999 888 99999999976 899988
Q ss_pred eeee-----c---CCceeeccc--------HHHHHHHHh-----cCCccchHHHHHHHHHHHHHHHHHhccc
Q 038952 166 IGRI-----M---GRPIDLNLQ--------LFETATLMI-----TEENSNYFKGLMLVFCYVIVAASFLVLE 216 (234)
Q Consensus 166 ig~~-----~---~~p~~l~~~--------~~~~~~l~~-----~~~~~~~~eG~~Ll~~Y~~~~~~~~~~~ 216 (234)
+|.. . ..|+.+.-+ ++.++++.+ .+-+++|.-|++++++|++|++..+...
T Consensus 1015 LGlPWlI~~li~g~~pV~V~S~GL~~sI~LLF~~LlflissI~l~kwrL~R~lGivlLvlYvvFLV~aiLiE 1086 (1096)
T TIGR00927 1015 LPVPWLLFSLINGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVMLE 1086 (1096)
T ss_pred ccHHHHHHHHhccCcceeecCccHHHHHHHHHHHHHHHHHHHHhcceEEechHHHHHHHHHHHHHHHHHHHh
Confidence 8853 1 234433221 111111111 5679999999999999999998776654
No 16
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=98.17 E-value=3.7e-06 Score=84.90 Aligned_cols=71 Identities=11% Similarity=0.207 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCCC-------------
Q 038952 98 KRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDKL------------- 159 (234)
Q Consensus 98 ~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~~------------- 159 (234)
.|.....++.+++.+.+.+..+++.+..++..+|+|+.++|+|++|+ ||| +|+.||+|++.
T Consensus 752 ~~~g~~~f~~sI~~Ig~l~~~i~~~a~~ig~~~gi~~~viGlt~vA~-GTSlPEl~~S~~aA~~~~~~d~aigNv~GSNi 830 (928)
T TIGR00845 752 YWGGWACFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVAL-GTSVPDTFASKVAATQDQYADASIGNVTGSNA 830 (928)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhhhheeeeE-ecCcHHHHHHHHHHHcCCCCceeEEeecchHH
Confidence 44445666677888888999999999999999999999999999999 888 89999999873
Q ss_pred cceeeeeeee
Q 038952 160 VPFSIVIGRI 169 (234)
Q Consensus 160 ~pilvvig~~ 169 (234)
+|+++++|..
T Consensus 831 fNi~l~lGv~ 840 (928)
T TIGR00845 831 VNVFLGIGVA 840 (928)
T ss_pred HHHHHHHHHH
Confidence 8999998864
No 17
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=98.00 E-value=9.7e-06 Score=74.42 Aligned_cols=107 Identities=15% Similarity=0.119 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh----HHHHHHHhCCC------------cceeeee
Q 038952 103 IWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA----GAIMFTMKDKL------------VPFSIVI 166 (234)
Q Consensus 103 ~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts----tsi~aA~k~~~------------~pilvvi 166 (234)
...+...+.+.-.|++++++.+++|+++| +.++|++++++ ||. +++.|+++|+. +|+++++
T Consensus 20 ~~F~~~~~aiipla~~l~~~~~~lA~~~g--~~vggl~~~~~-gt~pEL~vsi~A~~~g~~~i~~gnivGS~i~NllLil 96 (349)
T TIGR00378 20 LTFLFNFLAIIPLAAIMGNATEELADKAG--PTIGGLLNATF-GNAVELIVSIIALKEGLVRIVQASLTGSLLGNLLLVL 96 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC--chHHHHHHHhh-ccHHHHHHHHHHHHcCChhhhHHHHHHHHHHhHHHHH
Confidence 44556777888999999999999999999 89999999999 888 89999999997 9999999
Q ss_pred eee-cCCcee-----eccc-----HHHH----HHHHhc-----------CC---ccchHHHHHHHHHHHHHHHHH
Q 038952 167 GRI-MGRPID-----LNLQ-----LFET----ATLMIT-----------EE---NSNYFKGLMLVFCYVIVAASF 212 (234)
Q Consensus 167 g~~-~~~p~~-----l~~~-----~~~~----~~l~~~-----------~~---~~~~~eG~~Ll~~Y~~~~~~~ 212 (234)
|.. ...|+. +..+ ...+ ..+++. |+ .++|.+|.++++.|++|...-
T Consensus 97 Gls~liggl~~~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~~~~~~~ls~~~aiill~lY~~~L~~~ 171 (349)
T TIGR00378 97 GLCFFFGGLNYKQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGKEDGKILNLSRGTSIVIIIVYVLFLYFQ 171 (349)
T ss_pred HHHHHHhccccceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 976 333332 2111 1111 111111 33 588999999999999998544
No 18
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=97.90 E-value=1.9e-05 Score=72.94 Aligned_cols=108 Identities=17% Similarity=0.083 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh----HHHHHHHhCCC------------cceeeee
Q 038952 103 IWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA----GAIMFTMKDKL------------VPFSIVI 166 (234)
Q Consensus 103 ~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts----tsi~aA~k~~~------------~pilvvi 166 (234)
...+.+.+++..+++.++++++.+|+++|+| +|-++++.++|. +++.|+.+|+. .|++.++
T Consensus 38 ~~F~~~~~~li~~a~~lv~~a~~lA~~~G~~---vG~ll~a~~ts~pEL~vsi~A~~~g~~~la~gnivGS~i~NilLIl 114 (365)
T TIGR00846 38 VIFLLNLLGIIPLAERVSFATEQLAHRLGPT---LGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVL 114 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---hhhHHHHHHhHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3455788889999999999999999999998 455566884443 89999999887 8999988
Q ss_pred eee-cCCceee----cccHHH-------H-H-HH--Hh-------cCC-----ccchHHHHHHHHHHHHHHHHHh
Q 038952 167 GRI-MGRPIDL----NLQLFE-------T-A-TL--MI-------TEE-----NSNYFKGLMLVFCYVIVAASFL 213 (234)
Q Consensus 167 g~~-~~~p~~l----~~~~~~-------~-~-~l--~~-------~~~-----~~~~~eG~~Ll~~Y~~~~~~~~ 213 (234)
|.. ...|... .++... + . .+ .+ .++ ..+|.+|.++++.|++|..--+
T Consensus 115 Gl~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~~~~~~~ls~~~giill~ly~~yl~~~~ 189 (365)
T TIGR00846 115 GLSLFLGGIKNIREQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDSILGLSRGIAIVMLILYGAFLVFQL 189 (365)
T ss_pred HHHHHHhccCccceeeccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 875 2233321 122111 1 0 01 11 233 5899999999999999986333
No 19
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.75 E-value=4.2e-05 Score=71.73 Aligned_cols=110 Identities=14% Similarity=0.222 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCCC------------cceeee
Q 038952 103 IWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDKL------------VPFSIV 165 (234)
Q Consensus 103 ~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~~------------~pilvv 165 (234)
+..++++.-++.-|.++|.=+..+-+.+|||+.++|+|++|- ||| ||++.||||-. |-+++-
T Consensus 427 vTFigSIlWIA~fSYLMVWwa~~iGeT~gIp~eIMGLTiLAA-GTSIPDlitSvIVARKGlGDMAVSsSiGSNiFDI~VG 505 (588)
T KOG1307|consen 427 VTFIGSILWIAAFSYLMVWWANIIGETLGIPDEIMGLTILAA-GTSIPDLITSVIVARKGLGDMAVSSSIGSNIFDILVG 505 (588)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcccccCCCHHHhhhhhhhc-CCchHHhhHhhhhcccccccceeecccccchhheeec
Confidence 456777888999999999999999999999999999999997 999 99999999986 666665
Q ss_pred eeee--c-----C-Cc-eeecccH--------HHHHHH-----HhcCCccchHHHHHHHHHHHHHHHHHh
Q 038952 166 IGRI--M-----G-RP-IDLNLQL--------FETATL-----MITEENSNYFKGLMLVFCYVIVAASFL 213 (234)
Q Consensus 166 ig~~--~-----~-~p-~~l~~~~--------~~~~~l-----~~~~~~~~~~eG~~Ll~~Y~~~~~~~~ 213 (234)
++.. + + +| +.+.-+. +.+... .+.+.|.|+.-|..++..|..+.+.--
T Consensus 506 LplPWLL~~lI~~~~~~i~vsS~GL~csi~lLf~ml~v~v~~ia~~rWrMnK~lG~~m~llY~~Fl~~sv 575 (588)
T KOG1307|consen 506 LPLPWLLYTLIYGFKSKISVSSNGLVCSIGLLFAMLIVLVLGIALSRWRMNKILGFLMILLYFVFLIISV 575 (588)
T ss_pred CCcHHHHHHHHhhcCCceeecCCceehHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHhhh
Confidence 5532 1 1 22 4433211 111111 117889999999999999988875443
No 20
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.64 E-value=1.6e-05 Score=74.52 Aligned_cols=99 Identities=15% Similarity=0.306 Sum_probs=75.6
Q ss_pred HHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh----HHHHHHH--hCCC----------cceeeeeeee---cC
Q 038952 111 WISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA----GAIMFTM--KDKL----------VPFSIVIGRI---MG 171 (234)
Q Consensus 111 ~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts----tsi~aA~--k~~~----------~pilvvig~~---~~ 171 (234)
+.++|-|++|.+.+.+.|.+|+|+-+.|-|..|-+|++ |++.-.. +|+. ||+|.++|.. ..
T Consensus 71 LAIVCDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIGVFIt~~dVGiGTIVGSAvFNIL~Vig~C~LFSr 150 (588)
T KOG1307|consen 71 LAIVCDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIGVFITQGDVGIGTIVGSAVFNILCVIGVCGLFSR 150 (588)
T ss_pred HHHHhcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhheeEEEecCCcceeeeeehhhhhHHHHHHHHHhhcc
Confidence 34679999999999999999999999999999984444 8875543 3333 9999999975 23
Q ss_pred Cceeec-------ccHHHH--HHH--HhcCCccchHHHHHHHHHHHHHH
Q 038952 172 RPIDLN-------LQLFET--ATL--MITEENSNYFKGLMLVFCYVIVA 209 (234)
Q Consensus 172 ~p~~l~-------~~~~~~--~~l--~~~~~~~~~~eG~~Ll~~Y~~~~ 209 (234)
++++|. .+.|.+ +++ ++.|.++.|+|.++|+..|+.|.
T Consensus 151 qvl~LtWWPLfRD~sfY~lsl~~Li~Ff~D~~I~WwEaL~L~~~Yi~Yv 199 (588)
T KOG1307|consen 151 QVLNLTWWPLFRDVSFYTLSLIMLIYFFLDELIMWWEALALLLMYISYV 199 (588)
T ss_pred cccccccchhhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHh
Confidence 555554 122222 222 23999999999999999999996
No 21
>PLN03151 cation/calcium exchanger; Provisional
Probab=97.34 E-value=0.0025 Score=63.01 Aligned_cols=111 Identities=15% Similarity=0.248 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCC----C----------cce
Q 038952 102 IIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDK----L----------VPF 162 (234)
Q Consensus 102 ~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~----~----------~pi 162 (234)
+.-++.+++.+...|.-+|+-.+.+...+|+|+.+.|+|+.|. ||| +.+.-|++|. + ||+
T Consensus 486 ~~~f~~Si~wi~~~a~elv~~l~~iG~i~~is~~~lglTvlA~-gnsi~Dlian~~lA~~G~~~m~mA~~a~~ggp~F~i 564 (650)
T PLN03151 486 LGGFIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAW-GNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNT 564 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH-HccHHHHHHHHHHHHcCCchhHHHHHHhhhhhHHHH
Confidence 3445677888899999999999999999999999999999999 888 8888899984 2 777
Q ss_pred eeeeeeec------CCc--eeecccH-HH-H-H-H---HH-----h--cCCccchHHHHHHHHHHHHHHHHHh
Q 038952 163 SIVIGRIM------GRP--IDLNLQL-FE-T-A-T---LM-----I--TEENSNYFKGLMLVFCYVIVAASFL 213 (234)
Q Consensus 163 lvvig~~~------~~p--~~l~~~~-~~-~-~-~---l~-----~--~~~~~~~~eG~~Ll~~Y~~~~~~~~ 213 (234)
++-+|... .+| .....+. .. . . + ++ + ++-|.+|.-|..++..|+.|.+..-
T Consensus 565 l~glG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~L~~~li~~~~~~f~~~R~~G~~li~~Y~~Fl~~~~ 637 (650)
T PLN03151 565 LVGLGMSMLLGAWSKSPESYMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLGVGLIALYLIFLTFRV 637 (650)
T ss_pred HHhccHHHHHHHhhcCCCceeecCCChHHHHHHHHHHHHHHHHHHHHHhCeeechhHHHHHHHHHHHHHHHHH
Confidence 77777531 222 3232221 11 1 0 0 10 1 6779999999999999999986553
No 22
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=96.77 E-value=0.013 Score=57.57 Aligned_cols=107 Identities=15% Similarity=0.277 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCCC------------cceeee
Q 038952 103 IWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDKL------------VPFSIV 165 (234)
Q Consensus 103 ~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~~------------~pilvv 165 (234)
.-++.+.+.+...|.=+|.-.+.+..-+|+||.+.|+|+.|- ||| +=+..|++|.. +|.++-
T Consensus 450 ~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AW-gNSiGDLIAniavak~G~p~MAmaac~GGplfn~lvg 528 (605)
T KOG2399|consen 450 LGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVLAW-GNSIGDLIANIAVAKQGYPRMAMAACIGGPLFNLLVG 528 (605)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH-hccHHHHHHHHHHHHcCcHHHHHHHHhhhHHHHHHHH
Confidence 445667778889999999999999999999999999999999 888 55666666664 887777
Q ss_pred eeee------cCCceeeccc--H-------HHHHHHH-----h--cCCccchHHHHHHHHHHHHHHH
Q 038952 166 IGRI------MGRPIDLNLQ--L-------FETATLM-----I--TEENSNYFKGLMLVFCYVIVAA 210 (234)
Q Consensus 166 ig~~------~~~p~~l~~~--~-------~~~~~l~-----~--~~~~~~~~eG~~Ll~~Y~~~~~ 210 (234)
+|.. .++|.+.... . +..+.+. + .+-|.+|.-|..|+..|+.+-.
T Consensus 529 ~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~fL~i~l~~slv~~~~~~f~~~r~~gi~L~~lyi~f~~ 595 (605)
T KOG2399|consen 529 LGLPLVISSLQGKPGNIVIPEDNSLRITLIFLLIGLLTSLVLIPTNRFRLRRVLGIGLLSLYIAFTL 595 (605)
T ss_pred hhHHHHHHHHhcCCCceecccCCceehhHHHHHHHHHHHHHHHhcccceeccchhhHHHHHHHHHHH
Confidence 7753 1355442211 1 1111111 1 7779999999999999999843
No 23
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=96.01 E-value=0.027 Score=57.60 Aligned_cols=111 Identities=16% Similarity=0.268 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHhHHHhHhhHHHHHHhcC------------------CCchhhhhhhhhhccCh-----HHHHHHHhCC-
Q 038952 103 IWLFILTNWISILSEYFVDAVEGASMELK------------------MPVAFISIILLPIVGNA-----GAIMFTMKDK- 158 (234)
Q Consensus 103 ~~Lv~g~~~l~~~a~~lV~s~~~ia~~lg------------------ise~~IGltivalvgts-----tsi~aA~k~~- 158 (234)
++++-...++...++-++.+++.+.+.-+ +||++.|+|++|+ ||| +++.+...++
T Consensus 80 ~~l~y~F~~~~i~ad~f~~sie~i~~~~~~v~~~~~~ge~~~~~~ri~~~tvag~t~~A~-gssaPe~~~s~~~~~~~~~ 158 (928)
T TIGR00845 80 VAMVYMFLGVSIIADRFMASIEVITSQEKEITIKKPNGETTVTTVRIWNETVSNLTLMAL-GSSAPEILLSVIEVCGHNF 158 (928)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccceeeeecCCCcceeeEeeeCCcccccceeeec-cCCchHHHHHHHHHhccCC
Confidence 34444555666667777899999999533 5999999999999 787 8888877654
Q ss_pred ----C----------cceeeeeeee-cCCc------e-ee-------cccHHHH-HHHH-h---cCCccchHHHHHHHHH
Q 038952 159 ----L----------VPFSIVIGRI-MGRP------I-DL-------NLQLFET-ATLM-I---TEENSNYFKGLMLVFC 204 (234)
Q Consensus 159 ----~----------~pilvvig~~-~~~p------~-~l-------~~~~~~~-~~l~-~---~~~~~~~~eG~~Ll~~ 204 (234)
. ||++++.|.. ..-| + ++ ..+.|.. ++.+ + .++.+..+||++-++.
T Consensus 159 ~~g~lg~gtivGsa~Fn~~vi~~~~~~~~p~g~~~~i~~l~Vf~vTa~wSifAYiWl~lil~v~sp~vv~vwE~~lTl~f 238 (928)
T TIGR00845 159 EAGDLGPSTIVGSAAFNMFIIIAICVYVIPDGETRKIKHLRVFFVTAAWSVFAYVWLYLILAVFSPGVVEVWEGLLTFFF 238 (928)
T ss_pred ccccccccceehhHHHHHHhhheeEEEeccCccceeeeeeeEEEEeeeHHHHHHHHHHhhheeeCCcHHHHHHHHHHHHH
Confidence 1 9999999865 2111 1 12 2233322 2222 2 8899999999998888
Q ss_pred HHHHHHHHhc
Q 038952 205 YVIVAASFLV 214 (234)
Q Consensus 205 Y~~~~~~~~~ 214 (234)
|-+..+..|.
T Consensus 239 fp~~V~~A~~ 248 (928)
T TIGR00845 239 FPLCVVFAWV 248 (928)
T ss_pred HHHHHHHHHH
Confidence 8766655543
No 24
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=94.34 E-value=0.23 Score=48.88 Aligned_cols=100 Identities=18% Similarity=0.364 Sum_probs=69.6
Q ss_pred HHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCCC-------------cceeeeeeee-cCCc
Q 038952 113 SILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDKL-------------VPFSIVIGRI-MGRP 173 (234)
Q Consensus 113 ~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~~-------------~pilvvig~~-~~~p 173 (234)
....+++-.+++.+++.+.+||.+.|+|++|+ ||. +++.+-+..+. +=..++.|.. .-+|
T Consensus 120 ~~a~~yFspsL~~is~~L~l~esvAGVTlLa~-GNgapDvf~siasv~~~~~~~~~~~~~lg~alFVt~~V~G~i~~t~p 198 (605)
T KOG2399|consen 120 ITADDYFSPSLSSISSLLRLSESVAGVTLLAF-GNGAPDVFASIASVRGTPKGDLALNDLLGGALFVTTVVVGLIILTKP 198 (605)
T ss_pred HHHHHhcChHHHHHHHHhcCCCceeeEEEeee-cCCCchHHhhhheeecCCCcccHHHHHhccceeEEeeEeeeeeeecc
Confidence 45678899999999999999999999999999 886 55554433332 4445556665 4577
Q ss_pred eeeccc--HHHH----HHHH-----h-cCCccchHHHHHHHHHHHHHHHHHh
Q 038952 174 IDLNLQ--LFET----ATLM-----I-TEENSNYFKGLMLVFCYVIVAASFL 213 (234)
Q Consensus 174 ~~l~~~--~~~~----~~l~-----~-~~~~~~~~eG~~Ll~~Y~~~~~~~~ 213 (234)
+..+-. ..|. ..+. . +.++..++....++..|..|....-
T Consensus 199 Fki~~~~~iRDi~Fll~al~~l~~~~~~~~~v~~~~~l~fl~~y~~Yv~~vi 250 (605)
T KOG2399|consen 199 FKINANSFIRDILFLLLALLFLAFILLRGNKVEIWMALTFLGIYVVYVVTVI 250 (605)
T ss_pred eeeccchhHHHHHHHHHHHHHHHHHHhcCCceeHHhHHHHhHHHHHHHHHHH
Confidence 655432 1222 1111 1 5559999999999999998876433
No 25
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=92.60 E-value=0.18 Score=39.21 Aligned_cols=66 Identities=23% Similarity=0.421 Sum_probs=32.7
Q ss_pred cchhHhhhhhhccccccccc--cchHHHHHHHHHHHHHHHHH-HHHhhhhccccccccccchhhHHHHHHHHHHHHHHHH
Q 038952 2 LVLGSAFFCGALVNAKREGA--SAVASVNSGLLLMAVMALLF-LAVLLATHTELHFEKSKLALSRFCSCAMLVAYAAYLY 78 (234)
Q Consensus 2 LvlG~~~l~gg~r~~~~~~~--~~~~~~~~~lLiL~~~aLi~-P~~~~~~~~~~~~~~~~~~lS~~~giiLL~~y~~yl~ 78 (234)
++.|++.+.+..++ ++|+ ..........+.+.+..+.. +... ..++.+++.+|++++..|+.|++
T Consensus 71 l~~gl~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ll~~y~~y~~ 138 (140)
T PF01699_consen 71 LIVGLILLFGPIKL--GSQTIDWSSFTRDFSFLLLAILLLILFFLAF----------IRDGRISRFEGLVLLILYILYLV 138 (140)
T ss_dssp THHHHHHHHS-B-----------HHHHHHHHHHHHHHHHHHHCCT-------------HCT-BSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccc--cccccccchHHHHHHHHHHHHHHHHHHHHHH----------HcCCeEhHHHHHHHHHHHHHHHh
Confidence 46788888888775 3333 22222222222222222221 1111 12466889999999999999988
Q ss_pred H
Q 038952 79 F 79 (234)
Q Consensus 79 ~ 79 (234)
+
T Consensus 139 ~ 139 (140)
T PF01699_consen 139 F 139 (140)
T ss_dssp H
T ss_pred c
Confidence 6
No 26
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=74.38 E-value=13 Score=36.00 Aligned_cols=50 Identities=12% Similarity=0.202 Sum_probs=38.9
Q ss_pred HHhHhhHHHHHHhcCCCchhhhhhhhhhccCh-----HHHHHHHhCCC-------------cceeeeee
Q 038952 117 EYFVDAVEGASMELKMPVAFISIILLPIVGNA-----GAIMFTMKDKL-------------VPFSIVIG 167 (234)
Q Consensus 117 ~~lV~s~~~ia~~lgise~~IGltivalvgts-----tsi~aA~k~~~-------------~pilvvig 167 (234)
-+.=|-+..+.=..|+-+.+.++|.+|+ ||| +|-.||.+++. .|+.+-+|
T Consensus 443 a~igd~as~fgC~vglkdsVtA~~~vA~-GTS~PDtfASkiAA~~d~~AD~~igNvTgSNaVNvflGiG 510 (596)
T KOG1306|consen 443 AVIGDLASHFGCTVGLKDSVTAVTFVAL-GTSVPDTFASKIAAEQDQTADASIGNVTGSNAVNVFLGIG 510 (596)
T ss_pred HHHHHHHHhhceeecCccceeeeeeehh-cCCCcHHHHHHHHHhhcccccccccceecccceeEEEecc
Confidence 3444555555556789999999999999 998 78888888775 77777777
No 27
>PF10066 DUF2304: Uncharacterized conserved protein (DUF2304); InterPro: IPR019277 This entry represents hypothetical archaeal and bacterial proteins that have no known function.
Probab=68.89 E-value=33 Score=26.24 Aligned_cols=61 Identities=8% Similarity=0.109 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccCccCCcCcchHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCch
Q 038952 63 RFCSCAMLVAYAAYLYFQLKSQWQLCDQEEIPEISKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVA 135 (234)
Q Consensus 63 ~~~giiLL~~y~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~ 135 (234)
+..+++..+++..+....+|+++- +...++.|++.+..++.++-.. +-.+.+|+.+|+...
T Consensus 5 qii~i~~~v~~~~~ii~~vr~~~l----------~~~~~l~Wl~~~i~~l~~~ifP--~~~~~vA~~lGi~~~ 65 (115)
T PF10066_consen 5 QIILIIIAVLFLLFIIRLVRKRKL----------RLKYSLLWLVFSIILLILSIFP--NILDWVAKLLGIGRP 65 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc----------cHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHCCCch
Confidence 344555556666666666655432 4456788888887776665544 788899999998543
No 28
>PRK13499 rhamnose-proton symporter; Provisional
Probab=63.27 E-value=1.2e+02 Score=28.15 Aligned_cols=116 Identities=7% Similarity=-0.078 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcccccCccCCcCcchHHHHHH
Q 038952 25 ASVNSGLLLMAVMALLFLAVLLATHTELHFEKSKLALSRFCSCAMLVAYAAYLYFQLKSQWQLCDQEEIPEISKRESIIW 104 (234)
Q Consensus 25 ~~~~~~lLiL~~~aLi~P~~~~~~~~~~~~~~~~~~lS~~~giiLL~~y~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (234)
+--.++.+-+..-+++-|..+++-.. ....... .--..|++++++=++..-+-.+.+++...+|++++.+..|.++.
T Consensus 102 ~~pIs~Gl~lv~gtL~~~i~~gew~~--~~~t~~g-~~~~~gv~liliGi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~i 178 (345)
T PRK13499 102 GIGIAIGITLIVGTLMPPIINGNFDV--LLATNGG-RMTLLGVLVALIGVAIVGRAGQLKERKMGIKKAEEFNLKKGLIL 178 (345)
T ss_pred hhhHHHHHHHHHHHHHHHHHcccccc--ccccchH-HHHHHHHHHHHHHHHHHHHhhhhcccccccccccccchHhHHHH
Confidence 34455566666667776766553220 0111112 22444555444333333332222211111222345677888988
Q ss_pred HHHHHHHHHHhHHHhHhh--HHHHHHhcCCCchhhhhhhhh
Q 038952 105 LFILTNWISILSEYFVDA--VEGASMELKMPVAFISIILLP 143 (234)
Q Consensus 105 Lv~g~~~l~~~a~~lV~s--~~~ia~~lgise~~IGltiva 143 (234)
++++.++...-+..+..+ .++.+.+.|+++..+.+-...
T Consensus 179 alisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~ 219 (345)
T PRK13499 179 AVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYV 219 (345)
T ss_pred HHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHH
Confidence 888888877766555554 344445588888776664333
No 29
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=56.42 E-value=23 Score=20.62 Aligned_cols=24 Identities=21% Similarity=0.480 Sum_probs=19.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhh
Q 038952 60 ALSRFCSCAMLVAYAAYLYFQLKS 83 (234)
Q Consensus 60 ~lS~~~giiLL~~y~~yl~~~~~~ 83 (234)
+++...|.+++.+...|+.|-+-.
T Consensus 2 s~~vi~g~llv~lLl~YLvYAL~n 25 (29)
T PRK14750 2 NFSIVCGALLVLLLLGYLVYALFN 25 (29)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHcC
Confidence 367788999999999999987644
No 30
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=44.09 E-value=1.3e+02 Score=28.08 Aligned_cols=62 Identities=23% Similarity=0.158 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhccCh---HHHHHHHhCCC-------------cceeeeeee
Q 038952 105 LFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIVGNA---GAIMFTMKDKL-------------VPFSIVIGR 168 (234)
Q Consensus 105 Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalvgts---tsi~aA~k~~~-------------~pilvvig~ 168 (234)
++.+.+.+...+-.+++.+|.+|.+.| |.+-|++..-. +|. .-+.+++|+.. .|.+.+.|.
T Consensus 39 fi~~~l~i~plA~~v~~aaE~lA~~vG--~~~G~Lina~f-~~~iEvil~~~al~~G~~~lvr~Si~gsIm~~~llv~Gl 115 (368)
T COG0387 39 FIAALLAIIPLAFSVVRAAEVLAARVG--EPYGSLINALF-GNAIEVILIVAALKSGSPTLVRDSLYGSIMINLLLVVGL 115 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhHHHHHHH-HHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 333344444488899999999999866 55666664444 777 23344444444 677777776
Q ss_pred e
Q 038952 169 I 169 (234)
Q Consensus 169 ~ 169 (234)
.
T Consensus 116 s 116 (368)
T COG0387 116 S 116 (368)
T ss_pred H
Confidence 5
No 31
>PRK14748 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=39.79 E-value=62 Score=18.86 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=18.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhh
Q 038952 61 LSRFCSCAMLVAYAAYLYFQLKS 83 (234)
Q Consensus 61 lS~~~giiLL~~y~~yl~~~~~~ 83 (234)
.+...|+++.++...|+.|-+-.
T Consensus 3 ~~vi~G~ilv~lLlgYLvyALi~ 25 (29)
T PRK14748 3 AGVITGVLLVFLLLGYLVYALIN 25 (29)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 45678999999999999987643
No 32
>COG1971 Predicted membrane protein [Function unknown]
Probab=34.06 E-value=2.9e+02 Score=23.38 Aligned_cols=59 Identities=5% Similarity=-0.001 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 038952 24 VASVNSGLLLMAVMALLFLAVLLATHTELHFEKSKLALSRFCSCAMLVAYAAYLYFQLKSQ 84 (234)
Q Consensus 24 ~~~~~~~lLiL~~~aLi~P~~~~~~~~~~~~~~~~~~lS~~~giiLL~~y~~yl~~~~~~~ 84 (234)
..+..-+.++.|+.-.+.|..=.. ...-.+......+++.|-+++...+++..++--+.
T Consensus 33 ~~~~L~ia~~fG~f~~i~pliG~~--~g~~~s~~i~~~~~wigf~lL~~lG~~mI~e~f~~ 91 (190)
T COG1971 33 FKEALVIALIFGVFQAIMPLIGWF--IGKFLSTFIAEWAHWIGFVLLIILGLKMIIEGFKN 91 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 456666777777777777755111 11111234466888999999999999999876443
No 33
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=33.56 E-value=74 Score=28.15 Aligned_cols=50 Identities=14% Similarity=0.270 Sum_probs=42.4
Q ss_pred cchHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhhhhhhc
Q 038952 96 ISKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISIILLPIV 145 (234)
Q Consensus 96 ~~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGltivalv 145 (234)
..+.++++.++++++.++.+.-+.+.+.+..-+.-|+--..+++.++|++
T Consensus 193 faRkR~i~f~llgllfliiaigltvGT~~~A~~~~giY~~wv~~~l~a~~ 242 (256)
T PF09788_consen 193 FARKRAIIFFLLGLLFLIIAIGLTVGTWTYAKTYGGIYVSWVGLFLIALI 242 (256)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCcEeHHHHHHHHHHHH
Confidence 45677888899999888888888888888877778899999999999984
No 34
>COG2456 Uncharacterized conserved protein [Function unknown]
Probab=30.51 E-value=2.6e+02 Score=21.67 Aligned_cols=73 Identities=10% Similarity=0.111 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccccCccCCcCcchHHHHHHHHHHHHHHHHhHHHhHhhHHHHHHhcCCCchhhhhh
Q 038952 61 LSRFCSCAMLVAYAAYLYFQLKSQWQLCDQEEIPEISKRESIIWLFILTNWISILSEYFVDAVEGASMELKMPVAFISII 140 (234)
Q Consensus 61 lS~~~giiLL~~y~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lgise~~IGlt 140 (234)
.=...|+++......|.++++|..+-.+ .--++|...=...+.+.-+.. =...+|+-+|+..-.=.+.
T Consensus 10 ~iQ~igii~~l~~m~~~~~r~k~~k~s~----------~~ll~W~~~wv~vlifal~P~--fs~~Ia~ilGlGRGlDaL~ 77 (121)
T COG2456 10 TIQYIGIIFILFLMIYVFFRLKRRKLSL----------SDLLFWEAFWVFVLIFALFPE--FSGEIAEILGLGRGLDALF 77 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCc----------cchHHHHHHHHHHHHHHhcch--HHHHHHHHhccccccchhh
Confidence 3467788888888999999987765421 112333222211122211111 2346788888877776666
Q ss_pred hhhhc
Q 038952 141 LLPIV 145 (234)
Q Consensus 141 ivalv 145 (234)
++.++
T Consensus 78 vitI~ 82 (121)
T COG2456 78 VITIG 82 (121)
T ss_pred HHHHH
Confidence 66663
No 35
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=28.15 E-value=3.3e+02 Score=23.29 Aligned_cols=17 Identities=41% Similarity=0.489 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 038952 28 NSGLLLMAVMALLFLAV 44 (234)
Q Consensus 28 ~~~lLiL~~~aLi~P~~ 44 (234)
-+.++++|..+|+--+.
T Consensus 99 DssLl~lg~~aLlsgit 115 (226)
T COG4858 99 DSSLLFLGAMALLSGIT 115 (226)
T ss_pred cccHHHHHHHHHHHHHH
Confidence 35689999999986544
No 36
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=27.55 E-value=44 Score=22.87 Aligned_cols=51 Identities=20% Similarity=0.174 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccCc--cCCcCcchHHHHHHHHHHHHHHHHh
Q 038952 65 CSCAMLVAYAAYLYFQLKSQWQLCDQ--EEIPEISKRESIIWLFILTNWISIL 115 (234)
Q Consensus 65 ~giiLL~~y~~yl~~~~~~~~~~~~~--~~~~~~~~~~~~~~Lv~g~~~l~~~ 115 (234)
.|++|++.=+..++|=++.+++..++ +.-...+.-+.+.++++|.++...|
T Consensus 3 igi~Llv~GivLl~~G~~~~~S~~s~~s~~~TG~~t~~t~~~ligG~va~ivG 55 (59)
T PF11381_consen 3 IGIALLVGGIVLLYFGYQASDSLGSQVSRAFTGSPTDKTIWYLIGGAVAVIVG 55 (59)
T ss_pred eeehHHHHHHHHHHhhhhhhhhHHHHHHHHhcCCCCchhHHHHHhHHHHHHHH
Confidence 45666666666666555444332111 0001112235666677777666554
No 37
>PF09125 COX2-transmemb: Cytochrome C oxidase subunit II, transmembrane; InterPro: IPR015209 This N-terminal domain forms the transmembrane region in subunit II of cytochrome c oxidase from Thermus thermophilus. This domain adopts a tertiary structure consisting of two antiparallel transmembrane helices, in a transmembrane helix hairpin fold []. ; PDB: 1EHK_B 2QPE_B 3S8F_B 4EV3_B 3BVD_B 3S8G_B 3EH3_B 3S3C_B 3S39_B 3QJQ_B ....
Probab=27.31 E-value=89 Score=19.32 Aligned_cols=20 Identities=20% Similarity=0.452 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 038952 65 CSCAMLVAYAAYLYFQLKSQ 84 (234)
Q Consensus 65 ~giiLL~~y~~yl~~~~~~~ 84 (234)
-|+.++++|++..-|.+-+|
T Consensus 19 F~l~mi~vFi~li~ytl~th 38 (38)
T PF09125_consen 19 FALAMILVFIALIGYTLATH 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 46778888888888877665
No 38
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=24.02 E-value=1.8e+02 Score=27.42 Aligned_cols=47 Identities=9% Similarity=-0.001 Sum_probs=33.2
Q ss_pred CcchHHHHHHHHHHHHHHHHhHHH-hHhhHHHHHHhcCCCchhhhhhhh
Q 038952 95 EISKRESIIWLFILTNWISILSEY-FVDAVEGASMELKMPVAFISIILL 142 (234)
Q Consensus 95 ~~~~~~~~~~Lv~g~~~l~~~a~~-lV~s~~~ia~~lgise~~IGltiv 142 (234)
+...|..+..+..+.-. ...+|+ .+.=.+++|+++|+||.-.|..+-
T Consensus 8 ~~~~~~~l~aLa~~~F~-igttEfv~~gLLp~iA~dl~vs~~~aG~lis 55 (394)
T COG2814 8 RKPMWLALLALALAAFA-IGTTEFVPVGLLPPIAADLGVSEGAAGQLIT 55 (394)
T ss_pred cccchHHHHHHHHHHHH-HHhHHHHHHhchHHHHHHcCCCHHHHHHHHH
Confidence 34556666666666655 445666 455578999999999999998543
No 39
>PF02411 MerT: MerT mercuric transport protein; InterPro: IPR003457 MerT is an mercuric transport integral membrane protein and is responsible for transport of the Hg2+ iron from periplasmic MerP (also part of the transport system) to mercuric reductase (MerA).; GO: 0015097 mercury ion transmembrane transporter activity, 0015694 mercury ion transport, 0016020 membrane
Probab=23.79 E-value=3.5e+02 Score=20.93 Aligned_cols=18 Identities=17% Similarity=0.113 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 038952 30 GLLLMAVMALLFLAVLLA 47 (234)
Q Consensus 30 ~lLiL~~~aLi~P~~~~~ 47 (234)
..-+.+..+.+.|...-.
T Consensus 16 laAv~aS~CCi~Pllll~ 33 (116)
T PF02411_consen 16 LAAVLASLCCIGPLLLLS 33 (116)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345667788899987643
No 40
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=23.09 E-value=1e+02 Score=24.17 Aligned_cols=24 Identities=8% Similarity=0.221 Sum_probs=16.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhc
Q 038952 61 LSRFCSCAMLVAYAAYLYFQLKSQ 84 (234)
Q Consensus 61 lS~~~giiLL~~y~~yl~~~~~~~ 84 (234)
+....|++++++++.|+..+.|++
T Consensus 71 ~gv~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 71 FGVMAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 556777888887777777665443
No 41
>PF07331 TctB: Tripartite tricarboxylate transporter TctB family; InterPro: IPR009936 This entry contains bacterial proteins of around 150 residues in length, which have 4 transmembrane domains. Some of the sequences in the entry are annotated as the TctB subunit of the tripartite tricarboxylate transport(TTT) family. However there is no direct evidence to support this annotation as characterised members of this family are not associated with the entry.
Probab=23.08 E-value=3.4e+02 Score=20.64 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=15.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhc
Q 038952 59 LALSRFCSCAMLVAYAAYLYFQLKSQ 84 (234)
Q Consensus 59 ~~lS~~~giiLL~~y~~yl~~~~~~~ 84 (234)
..+.+..++++++.=+..+....+++
T Consensus 35 ~~fP~~l~~~l~~~~~~l~~~~~~~~ 60 (141)
T PF07331_consen 35 GFFPRLLGILLLILSLLLLVRSFRGP 60 (141)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45677777777766555554444443
No 42
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=22.78 E-value=4.1e+02 Score=21.43 Aligned_cols=19 Identities=16% Similarity=0.254 Sum_probs=14.9
Q ss_pred HHhHhhHHHHHHhcCCCch
Q 038952 117 EYFVDAVEGASMELKMPVA 135 (234)
Q Consensus 117 ~~lV~s~~~ia~~lgise~ 135 (234)
.-++.-++.+|+.+|+|+.
T Consensus 79 ~~~~~fi~~vA~~~~V~~~ 97 (149)
T PF11694_consen 79 SQMVHFIESVAKDLGVSKE 97 (149)
T ss_pred HHHHHHHHHHHHHhCCChh
Confidence 4467778899999998864
No 43
>PF12263 DUF3611: Protein of unknown function (DUF3611); InterPro: IPR022051 This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 180 and 205 amino acids in length. There are two completely conserved residues (W and G) that may be functionally important.
Probab=22.29 E-value=4.7e+02 Score=21.90 Aligned_cols=67 Identities=10% Similarity=0.062 Sum_probs=37.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhh-ccccc--CccCCcCc-----chHHHHHHHHHHHHHHHHhHHHhHhhHHHH
Q 038952 60 ALSRFCSCAMLVAYAAYLYFQLKS-QWQLC--DQEEIPEI-----SKRESIIWLFILTNWISILSEYFVDAVEGA 126 (234)
Q Consensus 60 ~lS~~~giiLL~~y~~yl~~~~~~-~~~~~--~~~~~~~~-----~~~~~~~~Lv~g~~~l~~~a~~lV~s~~~i 126 (234)
.+....+-++...+-.|..|++.+ .|+.. +.+.+|++ ..+..+..=++|+.+-.+|++..|.....=
T Consensus 58 gl~~a~~gl~~l~~si~~~fry~Rlar~L~~~~~~~~P~k~~~~~~l~~Gl~~nl~Gmllt~lG~~a~vG~L~ak 132 (183)
T PF12263_consen 58 GLFLAICGLVALFFSIFWSFRYTRLARRLRSPNPAKRPSKADVVRLLRIGLIINLVGMLLTLLGAQATVGTLVAK 132 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555556666677777777733 23222 22222221 234444555567777778888887766443
No 44
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=21.89 E-value=4.8e+02 Score=21.90 Aligned_cols=44 Identities=14% Similarity=0.262 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHhHHHhHhhHHHHHHhcC-----CCchhhhhhhhhh
Q 038952 101 SIIWLFILTNWISILSEYFVDAVEGASMELK-----MPVAFISIILLPI 144 (234)
Q Consensus 101 ~~~~Lv~g~~~l~~~a~~lV~s~~~ia~~lg-----ise~~IGltival 144 (234)
.....+++.++.....-+....++.+.+.+| +=+.+.|+++.++
T Consensus 142 ~~~~~~~ai~~~~~~~~l~l~~a~~i~~~lG~~g~~vi~Ri~Glil~ai 190 (203)
T PF01914_consen 142 SLLIVLIAILLVALITYLILRFADKIMRRLGKTGLQVITRIMGLILAAI 190 (203)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 3444445555555566667777778877776 4578889998888
Done!