Query 038954
Match_columns 69
No_of_seqs 112 out of 387
Neff 4.3
Searched_HMMs 13730
Date Mon Mar 25 07:43:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038954.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/038954hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gsta1 a.45.1.1 (A:85-217) Cl 23.5 21 0.0016 19.9 2.0 24 4-28 108-131 (133)
2 d2fhea1 a.45.1.1 (A:81-216) Cl 11.1 61 0.0044 18.2 1.8 25 4-29 107-131 (136)
3 d1gsua1 a.45.1.1 (A:85-217) Cl 11.0 63 0.0046 17.7 1.9 25 4-29 108-132 (133)
4 d2a5yb1 a.4.5.80 (B:386-543) C 10.4 27 0.002 21.7 0.0 18 1-18 114-134 (158)
5 d1xvla1 c.92.2.2 (A:49-327) Mn 8.5 2.1E+02 0.015 17.5 3.9 50 17-66 104-154 (279)
6 d2c4ja1 a.45.1.1 (A:86-218) Cl 7.9 94 0.0069 17.0 1.8 24 4-28 108-131 (133)
7 d3gtub1 a.45.1.1 (B:85-224) Cl 7.6 25 0.0018 19.6 -1.0 7 22-28 129-135 (140)
8 d1jb0x_ f.23.20.1 (X:) Subunit 6.7 1.4E+02 0.01 13.5 1.8 11 46-56 12-22 (29)
9 d1psza_ c.92.2.2 (A:) Pneumoco 5.7 3.2E+02 0.023 16.5 4.0 50 17-66 114-164 (286)
10 d1z5ye1 c.47.1.10 (E:49-184) T 4.6 1.1E+02 0.0082 16.3 0.7 15 15-32 22-36 (136)
No 1
>d2gsta1 a.45.1.1 (A:85-217) Class mu GST {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.50 E-value=21 Score=19.93 Aligned_cols=24 Identities=13% Similarity=0.310 Sum_probs=16.0
Q ss_pred HHhHHHcCCCCCceeeecccccchh
Q 038954 4 KLLTFWNHPTGPKTIHFWAPTFKWG 28 (69)
Q Consensus 4 ~~~~~~~~paGpkTvhFWaP~~kWg 28 (69)
++++.+.++-=++. -|.+|.+|||
T Consensus 108 ~ik~yl~s~~~~~~-p~~~~~a~~~ 131 (133)
T d2gsta1 108 KISAYMKSSRYLST-PIFSKLAQWS 131 (133)
T ss_dssp HHHHHHTSTTCCCC-CCSCTTSSSS
T ss_pred HHHHHHhCCCcCCC-CCCCcccCcC
Confidence 46677766644443 2669999997
No 2
>d2fhea1 a.45.1.1 (A:81-216) Class alpha GST {Fasciola hepatica [TaxId: 6192]}
Probab=11.06 E-value=61 Score=18.21 Aligned_cols=25 Identities=4% Similarity=-0.090 Sum_probs=16.6
Q ss_pred HHhHHHcCCCCCceeeecccccchhh
Q 038954 4 KLLTFWNHPTGPKTIHFWAPTFKWGI 29 (69)
Q Consensus 4 ~~~~~~~~paGpkTvhFWaP~~kWgl 29 (69)
++++.+.|+-=. ...+.+|.++||-
T Consensus 107 ~Ik~yl~S~~~~-~~P~~~~~a~~~~ 131 (136)
T d2fhea1 107 SIKAYMESNRFI-KWPLNGWHAQFGG 131 (136)
T ss_dssp HHHHHHTSSSCC-CSCSSCTTCSSSC
T ss_pred HHHHHHcCcccC-CCCCCCCcCccCC
Confidence 466777765432 3557799999973
No 3
>d1gsua1 a.45.1.1 (A:85-217) Class mu GST {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=10.97 E-value=63 Score=17.74 Aligned_cols=25 Identities=16% Similarity=0.114 Sum_probs=14.5
Q ss_pred HHhHHHcCCCCCceeeecccccchhh
Q 038954 4 KLLTFWNHPTGPKTIHFWAPTFKWGI 29 (69)
Q Consensus 4 ~~~~~~~~paGpkTvhFWaP~~kWgl 29 (69)
.+++..+++-=.+ --+++|++|||.
T Consensus 108 ~Ik~yl~s~~~~~-~P~~~~~~~~~~ 132 (133)
T d1gsua1 108 KISAYMRSGRFMK-APIFWYTALWNN 132 (133)
T ss_dssp HHHHHHTSSSCCC-CCCSCTTCSSSC
T ss_pred HHHHHHcCCCcCC-CCCCCcccccCC
Confidence 3555566544222 224579999983
No 4
>d2a5yb1 a.4.5.80 (B:386-543) Cell death protein 4, CED-4 {Caenorhabditis elegans [TaxId: 6239]}
Probab=10.42 E-value=27 Score=21.67 Aligned_cols=18 Identities=28% Similarity=0.481 Sum_probs=0.0
Q ss_pred ChhHHhHHHcCCCC---Ccee
Q 038954 1 IANKLLTFWNHPTG---PKTI 18 (69)
Q Consensus 1 ~~~~~~~~~~~paG---pkTv 18 (69)
||+-+++|..+.|| |||+
T Consensus 114 ~pshfqkfrr~sa~~m~pkt~ 134 (158)
T d2a5yb1 114 IPSHFQKFRRSSASEMYPKTT 134 (158)
T ss_dssp ---------------------
T ss_pred cchHHHHhhccchhhcCCccc
Confidence 57777888887777 6765
No 5
>d1xvla1 c.92.2.2 (A:49-327) Mn transporter MntC {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=8.47 E-value=2.1e+02 Score=17.45 Aligned_cols=50 Identities=20% Similarity=0.296 Sum_probs=40.8
Q ss_pred eeeecccccchhhhhhhhhh-hcccccchhHHHHHHHHHHHHHHHHHHHHh
Q 038954 17 TIHFWAPTFKWGISIANIAD-FSNYNMKNWNLFIVNFAMARTGLYQLSRKI 66 (69)
Q Consensus 17 TvhFWaP~~kWglviAgl~D-~~r~pP~N~~L~~~n~~~~~~~~~ql~R~~ 66 (69)
--|+|==..++...+..|+| +.+.-|.|-..+.-|.--...++-++-+.+
T Consensus 104 dpH~Wldp~~~~~~a~~Ia~~L~~~dP~~~~~y~~n~~~~~~~l~~l~~~~ 154 (279)
T d1xvla1 104 NPHAWMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQL 154 (279)
T ss_dssp CCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccChHHHHHHHHHHHHHHHHhChhhhhHHHHHHHHHhhhhhhhHHHH
Confidence 45999888899999999999 556669999999999888888888776644
No 6
>d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.88 E-value=94 Score=17.03 Aligned_cols=24 Identities=13% Similarity=0.254 Sum_probs=15.0
Q ss_pred HHhHHHcCCCCCceeeecccccchh
Q 038954 4 KLLTFWNHPTGPKTIHFWAPTFKWG 28 (69)
Q Consensus 4 ~~~~~~~~paGpkTvhFWaP~~kWg 28 (69)
++++..+++-=.+ ..+.+|+++||
T Consensus 108 ~ik~yl~s~~~~~-~p~~~~~a~~g 131 (133)
T d2c4ja1 108 KISAYMKSSRFLP-RPVFSKMAVWG 131 (133)
T ss_dssp HHHHHHHSTTCCC-CCSSCTTCSSS
T ss_pred HHHHHHhCcccCC-CCCCCcccccC
Confidence 4556666643322 44788999997
No 7
>d3gtub1 a.45.1.1 (B:85-224) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.57 E-value=25 Score=19.61 Aligned_cols=7 Identities=29% Similarity=0.880 Sum_probs=5.0
Q ss_pred ccccchh
Q 038954 22 APTFKWG 28 (69)
Q Consensus 22 aP~~kWg 28 (69)
+|.++||
T Consensus 129 ~~~~~~~ 135 (140)
T d3gtub1 129 NKMAQWG 135 (140)
T ss_dssp CTTSSSS
T ss_pred CCccccC
Confidence 6777776
No 8
>d1jb0x_ f.23.20.1 (X:) Subunit PsaX of photosystem I reaction centre {Synechococcus elongatus [TaxId: 32046]}
Probab=6.74 E-value=1.4e+02 Score=13.51 Aligned_cols=11 Identities=36% Similarity=0.555 Sum_probs=7.5
Q ss_pred HHHHHHHHHHH
Q 038954 46 NLFIVNFAMAR 56 (69)
Q Consensus 46 ~L~~~n~~~~~ 56 (69)
+|.+.||.++.
T Consensus 12 lllainflvaa 22 (29)
T d1jb0x_ 12 LLLAINFLVAA 22 (29)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 57777876654
No 9
>d1psza_ c.92.2.2 (A:) Pneumococcal surface antigen PssA {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
Probab=5.74 E-value=3.2e+02 Score=16.48 Aligned_cols=50 Identities=22% Similarity=0.179 Sum_probs=40.9
Q ss_pred eeeecccccchhhhhhhhhh-hcccccchhHHHHHHHHHHHHHHHHHHHHh
Q 038954 17 TIHFWAPTFKWGISIANIAD-FSNYNMKNWNLFIVNFAMARTGLYQLSRKI 66 (69)
Q Consensus 17 TvhFWaP~~kWglviAgl~D-~~r~pP~N~~L~~~n~~~~~~~~~ql~R~~ 66 (69)
--|+|-=..++...+-+|+| +.+.-|.|--.+.-|.-.....+-+|-+.+
T Consensus 114 dPH~Wldp~~~~~~a~~i~~~L~~~dP~~~~~y~~n~~~~~~~l~~l~~~~ 164 (286)
T d1psza_ 114 DPHAWLNLENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKES 164 (286)
T ss_dssp CCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHhHHHHHHHHH
Confidence 44899888899999999999 666679999999999988888887776554
No 10
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY, DsbE) {Escherichia coli [TaxId: 562]}
Probab=4.63 E-value=1.1e+02 Score=16.32 Aligned_cols=15 Identities=27% Similarity=0.758 Sum_probs=10.0
Q ss_pred Cceeeecccccchhhhhh
Q 038954 15 PKTIHFWAPTFKWGISIA 32 (69)
Q Consensus 15 pkTvhFWaP~~kWglviA 32 (69)
|-=++|||. |+-++-
T Consensus 22 ~vvl~Fwat---WC~pC~ 36 (136)
T d1z5ye1 22 PVLLNVWAT---WCPTSR 36 (136)
T ss_dssp CEEEEEECT---TCHHHH
T ss_pred EEEEEEEcC---cCCCcC
Confidence 555799985 766653
Done!