Query 038957
Match_columns 169
No_of_seqs 141 out of 1926
Neff 10.8
Searched_HMMs 46136
Date Fri Mar 29 04:57:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038957.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038957hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 4.6E-29 9.9E-34 160.0 7.2 128 26-166 40-168 (226)
2 KOG4412 26S proteasome regulat 99.9 2.1E-27 4.5E-32 152.5 9.9 135 19-167 68-202 (226)
3 PHA02791 ankyrin-like protein; 99.9 1.9E-24 4.1E-29 153.2 15.4 128 26-167 63-224 (284)
4 PHA02791 ankyrin-like protein; 99.9 3.1E-24 6.8E-29 152.1 13.6 143 19-166 26-189 (284)
5 PHA02875 ankyrin repeat protei 99.9 3.8E-24 8.2E-29 160.2 14.8 127 26-165 70-196 (413)
6 PHA02743 Viral ankyrin protein 99.9 3.2E-23 6.9E-28 137.0 14.0 127 26-166 22-157 (166)
7 PHA02875 ankyrin repeat protei 99.9 6.8E-23 1.5E-27 153.5 15.0 127 25-165 103-230 (413)
8 KOG0509 Ankyrin repeat and DHH 99.9 1.3E-23 2.8E-28 156.8 10.0 137 15-166 70-207 (600)
9 PHA02874 ankyrin repeat protei 99.9 2.5E-22 5.5E-27 151.2 17.0 144 20-166 121-284 (434)
10 KOG0509 Ankyrin repeat and DHH 99.9 6.2E-23 1.3E-27 153.3 12.0 126 27-165 47-173 (600)
11 PLN03192 Voltage-dependent pot 99.9 2.5E-22 5.3E-27 161.1 15.9 141 24-166 525-684 (823)
12 KOG0510 Ankyrin repeat protein 99.9 7.2E-23 1.6E-27 156.4 11.7 133 20-165 270-405 (929)
13 PHA02741 hypothetical protein; 99.9 3.2E-22 7E-27 132.7 13.5 125 25-162 22-157 (169)
14 PHA02859 ankyrin repeat protei 99.9 4.4E-22 9.5E-27 136.1 14.2 127 26-166 53-188 (209)
15 PHA02878 ankyrin repeat protei 99.9 3.6E-22 7.9E-27 152.0 15.2 126 25-166 169-296 (477)
16 PHA02878 ankyrin repeat protei 99.9 2.7E-22 5.8E-27 152.7 14.4 79 88-166 163-264 (477)
17 PHA02874 ankyrin repeat protei 99.9 6.9E-22 1.5E-26 148.9 15.9 138 26-164 37-217 (434)
18 KOG0508 Ankyrin repeat protein 99.9 6.2E-23 1.4E-27 148.8 9.5 132 24-169 84-215 (615)
19 PHA02859 ankyrin repeat protei 99.9 6.3E-22 1.4E-26 135.4 14.0 125 25-166 22-154 (209)
20 PHA02736 Viral ankyrin protein 99.9 5.7E-22 1.2E-26 129.6 11.2 130 21-164 15-153 (154)
21 KOG0510 Ankyrin repeat protein 99.9 4.9E-22 1.1E-26 151.9 11.9 133 20-164 221-368 (929)
22 PHA03100 ankyrin repeat protei 99.9 1.7E-21 3.7E-26 148.4 14.7 124 27-164 179-310 (480)
23 PHA02884 ankyrin repeat protei 99.9 3.1E-21 6.6E-26 137.2 14.2 126 18-157 27-157 (300)
24 PHA03100 ankyrin repeat protei 99.9 3.5E-21 7.7E-26 146.7 14.4 127 26-166 70-205 (480)
25 PHA02795 ankyrin-like protein; 99.9 2E-21 4.4E-26 143.3 12.4 128 26-166 151-291 (437)
26 KOG0512 Fetal globin-inducing 99.9 4.5E-21 9.8E-26 122.7 10.7 125 26-163 65-191 (228)
27 PHA02716 CPXV016; CPX019; EVM0 99.9 1.3E-20 2.8E-25 147.4 14.7 132 20-166 209-395 (764)
28 PHA02946 ankyin-like protein; 99.9 2.1E-20 4.7E-25 140.7 14.7 144 19-166 68-238 (446)
29 PHA03095 ankyrin-like protein; 99.9 3.3E-20 7.2E-25 141.0 14.9 134 17-165 41-182 (471)
30 PHA02989 ankyrin repeat protei 99.8 9.5E-20 2.1E-24 139.3 16.2 149 17-167 102-286 (494)
31 PHA03095 ankyrin-like protein; 99.8 4.9E-20 1.1E-24 140.1 14.4 126 25-164 188-317 (471)
32 PHA02716 CPXV016; CPX019; EVM0 99.8 4.5E-20 9.7E-25 144.5 14.3 128 25-166 178-348 (764)
33 PHA02876 ankyrin repeat protei 99.8 1.3E-19 2.7E-24 143.4 16.8 139 26-166 309-472 (682)
34 PF12796 Ank_2: Ankyrin repeat 99.8 4.5E-20 9.8E-25 109.8 10.9 87 62-165 1-87 (89)
35 PHA02798 ankyrin-like protein; 99.8 1.1E-19 2.4E-24 138.8 15.3 139 26-166 73-287 (489)
36 PHA02876 ankyrin repeat protei 99.8 1.9E-20 4.1E-25 148.1 11.0 127 25-164 42-238 (682)
37 KOG0508 Ankyrin repeat protein 99.8 8.6E-21 1.9E-25 137.9 7.9 120 25-159 118-237 (615)
38 PHA02946 ankyin-like protein; 99.8 1.2E-19 2.6E-24 136.7 14.4 143 22-166 35-204 (446)
39 PHA02989 ankyrin repeat protei 99.8 2.3E-19 4.9E-24 137.2 14.4 132 20-164 142-316 (494)
40 KOG0195 Integrin-linked kinase 99.8 7.2E-20 1.6E-24 126.2 9.8 145 6-165 17-161 (448)
41 PHA02795 ankyrin-like protein; 99.8 2.4E-19 5.3E-24 132.4 13.0 131 22-167 114-251 (437)
42 PHA02798 ankyrin-like protein; 99.8 3.3E-19 7.1E-24 136.2 12.3 121 32-166 46-177 (489)
43 KOG0502 Integral membrane anky 99.8 8.9E-20 1.9E-24 121.0 7.3 123 27-165 132-254 (296)
44 KOG0502 Integral membrane anky 99.8 1.4E-19 3.1E-24 120.0 7.9 129 17-161 154-282 (296)
45 PHA02917 ankyrin-like protein; 99.8 2E-18 4.3E-23 135.1 14.5 132 20-166 29-225 (661)
46 KOG4177 Ankyrin [Cell wall/mem 99.8 3.2E-19 7E-24 142.9 9.9 124 26-163 509-632 (1143)
47 PHA02741 hypothetical protein; 99.8 2.9E-18 6.3E-23 113.7 12.8 102 51-165 14-127 (169)
48 PF12796 Ank_2: Ankyrin repeat 99.8 1.1E-18 2.5E-23 103.8 9.8 85 28-118 1-85 (89)
49 PHA02917 ankyrin-like protein; 99.8 1.9E-18 4E-23 135.2 12.3 125 25-164 104-257 (661)
50 KOG4177 Ankyrin [Cell wall/mem 99.8 8.4E-19 1.8E-23 140.5 10.3 132 20-166 471-602 (1143)
51 KOG0514 Ankyrin repeat protein 99.8 6.2E-19 1.3E-23 124.6 7.2 130 19-163 264-400 (452)
52 KOG0195 Integrin-linked kinase 99.8 2.6E-19 5.6E-24 123.5 4.2 125 29-166 5-129 (448)
53 KOG0505 Myosin phosphatase, re 99.8 1.8E-18 3.8E-23 127.3 8.3 90 27-118 43-132 (527)
54 KOG0512 Fetal globin-inducing 99.8 4.1E-18 8.9E-23 109.2 8.7 98 60-169 65-162 (228)
55 PHA02730 ankyrin-like protein; 99.8 1.2E-17 2.6E-22 129.0 12.7 128 25-165 379-526 (672)
56 PHA02730 ankyrin-like protein; 99.7 5.7E-17 1.2E-21 125.3 13.1 128 26-167 345-492 (672)
57 cd00204 ANK ankyrin repeats; 99.7 1.5E-16 3.2E-21 99.8 12.6 118 26-157 9-126 (126)
58 PHA02884 ankyrin repeat protei 99.7 1.2E-16 2.5E-21 113.9 11.9 102 52-166 26-133 (300)
59 PHA02743 Viral ankyrin protein 99.7 7.6E-17 1.6E-21 106.6 10.3 101 53-166 15-124 (166)
60 KOG4214 Myotrophin and similar 99.7 7.5E-17 1.6E-21 93.0 8.1 103 27-144 5-107 (117)
61 PHA02792 ankyrin-like protein; 99.7 2.4E-16 5.2E-21 120.8 12.6 126 26-165 341-481 (631)
62 KOG0507 CASK-interacting adapt 99.7 5.8E-17 1.3E-21 123.7 7.3 139 27-167 52-219 (854)
63 KOG0507 CASK-interacting adapt 99.7 5.6E-17 1.2E-21 123.8 6.8 128 24-164 3-142 (854)
64 PHA02736 Viral ankyrin protein 99.7 1.3E-16 2.9E-21 104.2 7.8 104 51-166 10-122 (154)
65 COG0666 Arp FOG: Ankyrin repea 99.7 8.1E-16 1.8E-20 105.8 12.0 123 25-160 74-203 (235)
66 PLN03192 Voltage-dependent pot 99.7 1.1E-15 2.4E-20 123.1 13.4 117 17-148 552-700 (823)
67 TIGR00870 trp transient-recept 99.7 7.4E-16 1.6E-20 123.1 12.1 137 22-166 15-157 (743)
68 TIGR00870 trp transient-recept 99.6 3.6E-16 7.7E-21 124.9 7.5 129 25-160 129-280 (743)
69 KOG0514 Ankyrin repeat protein 99.6 3.1E-15 6.7E-20 106.1 11.2 128 17-159 296-429 (452)
70 cd00204 ANK ankyrin repeats; 99.6 7.7E-15 1.7E-19 91.9 12.0 99 54-165 3-101 (126)
71 KOG1710 MYND Zn-finger and ank 99.6 5.7E-15 1.2E-19 101.9 11.8 121 25-158 13-133 (396)
72 KOG4214 Myotrophin and similar 99.6 1.4E-15 3.1E-20 87.8 7.4 90 61-164 5-94 (117)
73 PF13637 Ank_4: Ankyrin repeat 99.6 3.3E-15 7.1E-20 80.4 6.4 54 92-157 1-54 (54)
74 PHA02792 ankyrin-like protein; 99.6 2.8E-14 6.2E-19 109.6 13.1 125 26-166 308-439 (631)
75 PF13637 Ank_4: Ankyrin repeat 99.6 9.5E-15 2.1E-19 78.5 6.8 54 58-112 1-54 (54)
76 KOG0515 p53-interacting protei 99.6 1.3E-14 2.9E-19 107.3 9.3 119 28-159 554-674 (752)
77 PTZ00322 6-phosphofructo-2-kin 99.6 2.5E-14 5.4E-19 112.7 11.1 86 61-159 85-170 (664)
78 PTZ00322 6-phosphofructo-2-kin 99.6 3.1E-14 6.8E-19 112.1 10.7 87 26-114 84-170 (664)
79 PF13857 Ank_5: Ankyrin repeat 99.6 5.5E-15 1.2E-19 79.9 4.4 55 78-144 2-56 (56)
80 KOG3676 Ca2+-permeable cation 99.6 5.3E-14 1.2E-18 108.6 10.8 124 25-159 185-330 (782)
81 PF13857 Ank_5: Ankyrin repeat 99.5 1.5E-14 3.2E-19 78.2 4.5 56 43-99 1-56 (56)
82 KOG3676 Ca2+-permeable cation 99.5 3.1E-13 6.7E-18 104.5 11.6 125 25-162 144-298 (782)
83 KOG0515 p53-interacting protei 99.5 8.4E-14 1.8E-18 103.2 8.1 91 62-165 554-644 (752)
84 COG0666 Arp FOG: Ankyrin repea 99.5 1.9E-12 4E-17 89.0 12.9 102 53-166 68-176 (235)
85 KOG4369 RTK signaling protein 99.5 4.8E-14 1.1E-18 112.2 4.8 132 20-164 753-884 (2131)
86 KOG4369 RTK signaling protein 99.3 1.6E-12 3.4E-17 103.9 6.0 134 20-167 787-922 (2131)
87 KOG0505 Myosin phosphatase, re 99.3 2.9E-12 6.3E-17 95.0 6.9 126 20-159 70-253 (527)
88 KOG1710 MYND Zn-finger and ank 99.2 3.3E-10 7.2E-15 78.7 9.1 94 59-164 13-106 (396)
89 PF13606 Ank_3: Ankyrin repeat 99.2 5.6E-11 1.2E-15 55.5 3.6 30 136-165 1-30 (30)
90 KOG0782 Predicted diacylglycer 99.1 3.9E-10 8.4E-15 84.9 8.7 121 26-159 868-989 (1004)
91 KOG0818 GTPase-activating prot 99.1 8.6E-10 1.9E-14 81.7 8.7 97 53-161 122-224 (669)
92 KOG0506 Glutaminase (contains 99.1 1.4E-10 3.1E-15 85.3 4.7 89 27-116 509-597 (622)
93 KOG0783 Uncharacterized conser 99.0 2E-10 4.4E-15 89.6 4.5 90 45-147 39-129 (1267)
94 KOG0705 GTPase-activating prot 99.0 1.8E-09 3.9E-14 81.3 8.7 96 22-118 622-720 (749)
95 PF00023 Ank: Ankyrin repeat H 99.0 7.4E-10 1.6E-14 53.0 4.0 32 136-167 1-32 (33)
96 KOG0506 Glutaminase (contains 99.0 1E-09 2.2E-14 80.9 5.0 93 57-161 505-597 (622)
97 KOG0522 Ankyrin repeat protein 98.9 5.6E-09 1.2E-13 77.9 7.6 88 26-114 22-110 (560)
98 KOG0818 GTPase-activating prot 98.9 9.6E-09 2.1E-13 76.3 7.9 92 21-114 130-222 (669)
99 PF13606 Ank_3: Ankyrin repeat 98.9 4.4E-09 9.4E-14 49.0 3.7 28 91-118 1-28 (30)
100 KOG0705 GTPase-activating prot 98.8 2.5E-08 5.5E-13 75.3 8.0 90 62-163 628-720 (749)
101 KOG0522 Ankyrin repeat protein 98.8 2.2E-08 4.7E-13 74.9 7.4 66 15-82 47-112 (560)
102 PF00023 Ank: Ankyrin repeat H 98.8 1.3E-08 2.8E-13 48.6 4.0 28 91-118 1-28 (33)
103 KOG0782 Predicted diacylglycer 98.8 2.7E-08 5.9E-13 75.3 7.2 89 26-115 901-990 (1004)
104 KOG3609 Receptor-activated Ca2 98.8 7E-08 1.5E-12 75.9 9.1 129 26-164 27-158 (822)
105 KOG0783 Uncharacterized conser 98.7 7.7E-09 1.7E-13 81.1 3.0 81 75-167 35-116 (1267)
106 KOG0520 Uncharacterized conser 98.5 2.4E-07 5.2E-12 74.4 4.8 132 19-159 570-702 (975)
107 KOG0521 Putative GTPase activa 98.4 4E-07 8.7E-12 72.9 4.7 88 57-157 655-742 (785)
108 KOG0511 Ankyrin repeat protein 98.4 2.9E-06 6.3E-11 61.6 7.8 73 25-99 37-109 (516)
109 KOG0511 Ankyrin repeat protein 98.3 4E-06 8.8E-11 60.9 6.8 58 59-117 37-94 (516)
110 KOG2384 Major histocompatibili 98.2 6.2E-06 1.3E-10 54.5 6.2 67 51-117 5-71 (223)
111 KOG2384 Major histocompatibili 98.1 9.4E-06 2E-10 53.6 5.7 65 85-160 5-69 (223)
112 KOG0520 Uncharacterized conser 98.1 9.4E-06 2E-10 65.6 6.1 99 53-164 569-668 (975)
113 KOG0521 Putative GTPase activa 97.8 2.1E-05 4.6E-10 63.3 3.6 88 25-114 657-744 (785)
114 smart00248 ANK ankyrin repeats 97.7 9E-05 2E-09 33.0 3.7 29 136-164 1-29 (30)
115 smart00248 ANK ankyrin repeats 97.3 0.00059 1.3E-08 30.1 3.6 26 92-117 2-27 (30)
116 PF06128 Shigella_OspC: Shigel 97.2 0.0086 1.9E-07 41.2 9.7 117 27-164 156-281 (284)
117 KOG3609 Receptor-activated Ca2 96.9 0.0028 6E-08 50.9 6.1 85 26-118 64-157 (822)
118 KOG2505 Ankyrin repeat protein 96.8 0.0031 6.8E-08 47.8 4.9 52 58-113 430-481 (591)
119 KOG2505 Ankyrin repeat protein 96.6 0.0032 7E-08 47.8 4.2 63 71-145 404-471 (591)
120 PF06128 Shigella_OspC: Shigel 95.7 0.11 2.3E-06 36.0 7.4 91 25-117 180-279 (284)
121 PF11929 DUF3447: Domain of un 95.0 0.063 1.4E-06 30.5 4.2 47 94-159 8-54 (76)
122 PF11929 DUF3447: Domain of un 91.5 0.97 2.1E-05 25.6 5.2 48 26-81 8-55 (76)
123 PF03158 DUF249: Multigene fam 90.9 3.5 7.7E-05 27.8 8.8 111 26-158 48-191 (192)
124 PF03158 DUF249: Multigene fam 73.4 9.9 0.00021 25.7 4.4 78 27-113 107-191 (192)
125 KOG4591 Uncharacterized conser 43.1 32 0.0007 23.7 2.8 53 89-149 219-272 (280)
126 PF12645 HTH_16: Helix-turn-he 42.3 41 0.00089 18.4 2.7 24 27-50 2-25 (65)
127 KOG4335 FERM domain-containing 41.1 21 0.00046 28.1 2.0 66 81-157 166-234 (558)
128 KOG1595 CCCH-type Zn-finger pr 32.2 6.4 0.00014 30.9 -1.9 93 56-160 56-155 (528)
129 PF08898 DUF1843: Domain of un 28.5 99 0.0022 16.2 3.0 23 26-48 5-27 (53)
130 PF04053 Coatomer_WDAD: Coatom 22.9 3.3E+02 0.0072 21.5 5.7 24 138-161 406-430 (443)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=4.6e-29 Score=160.04 Aligned_cols=128 Identities=22% Similarity=0.211 Sum_probs=84.6
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHh-cchhccccCCCCCCHHHHHHHcCC
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWR-QLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
+|||||+..|+.+++++|++.....++..|..||||||+|+..|+.++++.|+.+ +++ ++..++.|.||||||+..|.
T Consensus 40 t~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~ad-vna~tn~G~T~LHyAagK~r 118 (226)
T KOG4412|consen 40 TPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGAD-VNATTNGGQTCLHYAAGKGR 118 (226)
T ss_pred ceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCC-cceecCCCcceehhhhcCCh
Confidence 4677777777777777777543333556677777777777777777777777776 444 66777777777777777777
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
.+|+.+|++.|+. ++.+|..|.||||-|+.-|..+++++|+..|+.+++.
T Consensus 119 ~eIaqlLle~ga~------------i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~q 168 (226)
T KOG4412|consen 119 LEIAQLLLEKGAL------------IRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQ 168 (226)
T ss_pred hhHHHHHHhcCCC------------CcccccccCchhHHHHhccchhhHHHHHhcCCCCCcc
Confidence 7777777777766 3555555555555555555555555555555555443
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=2.1e-27 Score=152.46 Aligned_cols=135 Identities=19% Similarity=0.163 Sum_probs=123.0
Q ss_pred CCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHH
Q 038957 19 ELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLI 98 (169)
Q Consensus 19 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~ 98 (169)
.+..+- +|||.|+..|+.++++.|+.+....++..+..|+|+||+|+..|..+++++|+..+.. ++.+|..|.||||-
T Consensus 68 kDdaGW-tPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~-i~~kD~~~qtplHR 145 (226)
T KOG4412|consen 68 KDDAGW-TPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGAL-IRIKDKQGQTPLHR 145 (226)
T ss_pred ccccCC-chhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCC-CcccccccCchhHH
Confidence 344554 5899999999999999999984344788999999999999999999999999999987 89999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccccc
Q 038957 99 AARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSKI 167 (169)
Q Consensus 99 a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 167 (169)
|+..|..+++++|+..++. ++.+|..|+||||.|...++.+++.+|+++|++.....
T Consensus 146 AAavGklkvie~Li~~~a~------------~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~ed 202 (226)
T KOG4412|consen 146 AAAVGKLKVIEYLISQGAP------------LNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDRED 202 (226)
T ss_pred HHhccchhhHHHHHhcCCC------------CCcccccCccHHHHHHhccCchHHHHHHHhccceeecc
Confidence 9999999999999999988 79999999999999999999999999999999976543
No 3
>PHA02791 ankyrin-like protein; Provisional
Probab=99.93 E-value=1.9e-24 Score=153.20 Aligned_cols=128 Identities=14% Similarity=0.156 Sum_probs=74.9
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCC--------------
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWK-------------- 91 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-------------- 91 (169)
+|||.|+..|+.++++.|+..+.. ++..+..|.||||+|+..|+.+++++|+..+++ ++.++..
T Consensus 63 TpLh~Aa~~g~~eiV~lLL~~Gad-vn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gad-in~~~~~g~~TpL~~Aa~~g~ 140 (284)
T PHA02791 63 FPLHQAATLEDTKIVKILLFSGMD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLND 140 (284)
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccCCCCCcHHHHHHHHcCC
Confidence 355555555555555555554432 344455555555555555555555555555444 3333433
Q ss_pred -------------------CCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcH-HHHHHhhCcHH
Q 038957 92 -------------------GETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTS-LHNGVGEYFIK 151 (169)
Q Consensus 92 -------------------g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~-l~~A~~~~~~~ 151 (169)
|.||||+|+..|+.+++++|+++|++ ++.+|..|.|| ||+|+..|+.+
T Consensus 141 ~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd------------~n~~d~~g~t~~L~~Aa~~~~~e 208 (284)
T PHA02791 141 VSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTS------------TNTNNSLLFIPDIKLAIDNKDLE 208 (284)
T ss_pred HHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCCCC------------CCcccCCCCChHHHHHHHcCCHH
Confidence 44555555555555555555555444 56777777766 88888888888
Q ss_pred HHHHHHHcCCCccccc
Q 038957 152 LYKSLHARGTGVFSKI 167 (169)
Q Consensus 152 ~~~~Ll~~g~~~~~~~ 167 (169)
++++|+++|++++...
T Consensus 209 ~v~lLl~~Ga~in~~~ 224 (284)
T PHA02791 209 MLQALFKYDINIYSVN 224 (284)
T ss_pred HHHHHHHCCCCCccCc
Confidence 8888888888876554
No 4
>PHA02791 ankyrin-like protein; Provisional
Probab=99.92 E-value=3.1e-24 Score=152.10 Aligned_cols=143 Identities=15% Similarity=0.065 Sum_probs=114.3
Q ss_pred CCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHH
Q 038957 19 ELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLI 98 (169)
Q Consensus 19 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~ 98 (169)
.+..+. +|||+|+..|+.++++.|++.+.. .+. .++.||||+|+..|+.+++++|+..+.+ ++.+|..|+||||+
T Consensus 26 ~D~~G~-TpLh~Aa~~g~~eiv~~Ll~~ga~-~n~--~d~~TpLh~Aa~~g~~eiV~lLL~~Gad-vn~~d~~G~TpLh~ 100 (284)
T PHA02791 26 ADVHGH-SALYYAIADNNVRLVCTLLNAGAL-KNL--LENEFPLHQAATLEDTKIVKILLFSGMD-DSQFDDKGNTALYY 100 (284)
T ss_pred CCCCCC-cHHHHHHHcCCHHHHHHHHHCcCC-CcC--CCCCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHH
Confidence 344454 589999999999999999998854 333 3478999999999999999999999888 78899999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCC----CC-CCCc-----------ccccc----ccC-CCCCcHHHHHHhhCcHHHHHHHH
Q 038957 99 AARAGDPAIVSTLLNYVPAVKN----GT-EAEP-----------ESLLR----MTE-FEGNTSLHNGVGEYFIKLYKSLH 157 (169)
Q Consensus 99 a~~~~~~~~v~~ll~~~~~~~~----~~-~~~~-----------~~~~~----~~~-~~~~t~l~~A~~~~~~~~~~~Ll 157 (169)
|+..|+.+++++|++.+++... |. .... ..++. ..| ..|.||||+|+..|+.+++++|+
T Consensus 101 Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL 180 (284)
T PHA02791 101 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLL 180 (284)
T ss_pred HHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999987622 21 1111 11111 123 24789999999999999999999
Q ss_pred HcCCCcccc
Q 038957 158 ARGTGVFSK 166 (169)
Q Consensus 158 ~~g~~~~~~ 166 (169)
++|++++..
T Consensus 181 ~~gAd~n~~ 189 (284)
T PHA02791 181 DYMTSTNTN 189 (284)
T ss_pred HCCCCCCcc
Confidence 999987654
No 5
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.92 E-value=3.8e-24 Score=160.20 Aligned_cols=127 Identities=19% Similarity=0.152 Sum_probs=92.2
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
+|||.|+..|+.+.++.|+..+....+..+..|.||||+|+..|+.+++++|++.+++ ++.++..|.||||+|+..|+.
T Consensus 70 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad-~~~~~~~g~tpLh~A~~~~~~ 148 (413)
T PHA02875 70 SELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGAD-PDIPNTDKFSPLHLAVMMGDI 148 (413)
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCCH
Confidence 4666666666666666666665443344455677777777777777777777777776 666777777777777777777
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 149 ~~v~~Ll~~g~~------------~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~ 196 (413)
T PHA02875 149 KGIELLIDHKAC------------LDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDY 196 (413)
T ss_pred HHHHHHHhcCCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCc
Confidence 777777777766 577777788888888888888888888888877754
No 6
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.91 E-value=3.2e-23 Score=136.99 Aligned_cols=127 Identities=14% Similarity=0.175 Sum_probs=108.9
Q ss_pred HHHHHHHHccCHHHH----HHHHHHhhhhhccCCCCCCcHHHHHHHhCCHH---HHHHHHHhcchhccccC-CCCCCHHH
Q 038957 26 HELLNVLRREDEHQI----RLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHK---VVQEILWRQLSLLRKNN-WKGETALL 97 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~----~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~---~~~~ll~~~~~~~~~~~-~~g~tpl~ 97 (169)
+++|.|++.|+++.+ +.|+..+. .++..|..|.||||+|+..++.+ ++++|+..+.+ ++.++ ..|.||||
T Consensus 22 ~~l~~a~~~g~~~~l~~~~~~l~~~g~-~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad-in~~d~~~g~TpLh 99 (166)
T PHA02743 22 NTFLRICRTGNIYELMEVAPFISGDGH-LLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD-INARELGTGNTLLH 99 (166)
T ss_pred cHHHHHHHcCCHHHHHHHHHHHhhcch-hhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC-CCCCCCCCCCcHHH
Confidence 479999999999544 44555553 36678889999999999998854 47899999988 77787 58999999
Q ss_pred HHHHcCCHHHHHHHHh-cCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 98 IAARAGDPAIVSTLLN-YVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 98 ~a~~~~~~~~v~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+|+..++.+++++|+. .+++ ++.++..|.||||+|+..++.+++++|+++|++++..
T Consensus 100 ~A~~~g~~~iv~~Ll~~~gad------------~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~ 157 (166)
T PHA02743 100 IAASTKNYELAEWLCRQLGVN------------LGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDP 157 (166)
T ss_pred HHHHhCCHHHHHHHHhccCCC------------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 9999999999999995 6777 6889999999999999999999999999999998653
No 7
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.90 E-value=6.8e-23 Score=153.46 Aligned_cols=127 Identities=20% Similarity=0.167 Sum_probs=116.8
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.+|||.|+..|+.++++.|++.++. ++..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+
T Consensus 103 ~tpL~~A~~~~~~~iv~~Ll~~gad-~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~TpL~~A~~~g~ 180 (413)
T PHA02875 103 MTPLHLATILKKLDIMKLLIARGAD-PDIPNTDKFSPLHLAVMMGDIKGIELLIDHKAC-LDIEDCCGCTPLIIAMAKGD 180 (413)
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCC
Confidence 4689999999999999999999865 677888999999999999999999999999988 78899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCC-CcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEG-NTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~-~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
.+++++|++.|++ ++..+..| .||+|+|+..++.+++++|+++|++++.
T Consensus 181 ~eiv~~Ll~~ga~------------~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~ 230 (413)
T PHA02875 181 IAICKMLLDSGAN------------IDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNI 230 (413)
T ss_pred HHHHHHHHhCCCC------------CCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcch
Confidence 9999999999999 57777665 5889999999999999999999999864
No 8
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.90 E-value=1.3e-23 Score=156.84 Aligned_cols=137 Identities=20% Similarity=0.159 Sum_probs=109.2
Q ss_pred CCCCCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCC-CCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCC
Q 038957 15 IMDQELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMS-PRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGE 93 (169)
Q Consensus 15 ~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~ 93 (169)
..++.+..+ .++||||+-+++++++++|+++++. +|... .-+.||||+|++.|+..+++.|++.|++ +..+|.+|.
T Consensus 70 ~v~~~D~~g-~tlLHWAAiNNrl~v~r~li~~gad-vn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAd-pt~~D~~G~ 146 (600)
T KOG0509|consen 70 SVNNPDREG-VTLLHWAAINNRLDVARYLISHGAD-VNAIGGVLGSTPLHWAARNGHISVVDLLLQHGAD-PTLKDKQGL 146 (600)
T ss_pred CCCCCCcCC-ccceeHHHHcCcHHHHHHHHHcCCC-ccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCC-CceecCCCC
Confidence 344444444 4579999999999999999999875 55555 5578999999999999999999999998 888999999
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 94 TALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 94 tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+|+|+|+++++.-+|-+|+..+++ ++.+|.+|+||||+|+..|....++.|++-|+.+...
T Consensus 147 ~~lHla~~~~~~~~vayll~~~~d------------~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~ 207 (600)
T KOG0509|consen 147 TPLHLAAQFGHTALVAYLLSKGAD------------IDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLT 207 (600)
T ss_pred cHHHHHHHhCchHHHHHHHHhccc------------CCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccccc
Confidence 999999999999999999998877 5777777777777777777766567777777665543
No 9
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.90 E-value=2.5e-22 Score=151.20 Aligned_cols=144 Identities=19% Similarity=0.222 Sum_probs=122.6
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
+..+ .+|||+|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.. ++..+..|.||||+|
T Consensus 121 ~~~g-~T~Lh~A~~~~~~~~v~~Ll~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~-~n~~~~~g~tpL~~A 197 (434)
T PHA02874 121 DAEL-KTFLHYAIKKGDLESIKMLFEYGAD-VNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAY-ANVKDNNGESPLHNA 197 (434)
T ss_pred CCCC-ccHHHHHHHCCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHH
Confidence 3344 4589999999999999999999865 577888999999999999999999999999887 778899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCC----CCCCCc---------------cccccccCCCCCcHHHHHHhhC-cHHHHHHHHHc
Q 038957 100 ARAGDPAIVSTLLNYVPAVKN----GTEAEP---------------ESLLRMTEFEGNTSLHNGVGEY-FIKLYKSLHAR 159 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~----~~~~~~---------------~~~~~~~~~~~~t~l~~A~~~~-~~~~~~~Ll~~ 159 (169)
+..|+.+++++|++.+++... |..... +.+++.+|..|.||||+|+..+ +.+++++|+++
T Consensus 198 ~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~ 277 (434)
T PHA02874 198 AEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYH 277 (434)
T ss_pred HHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHC
Confidence 999999999999999987622 211111 3557788999999999999876 78999999999
Q ss_pred CCCcccc
Q 038957 160 GTGVFSK 166 (169)
Q Consensus 160 g~~~~~~ 166 (169)
|++++..
T Consensus 278 gad~n~~ 284 (434)
T PHA02874 278 KADISIK 284 (434)
T ss_pred cCCCCCC
Confidence 9998654
No 10
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.90 E-value=6.2e-23 Score=153.27 Aligned_cols=126 Identities=18% Similarity=0.178 Sum_probs=79.8
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccC-CCCCCHHHHHHHcCCH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNN-WKGETALLIAARAGDP 105 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~g~tpl~~a~~~~~~ 105 (169)
.++.|+..|+++.++.+++.....++..|.+|.++||+|+.+++.+++++|++++++ ++..+ ..+.||||||+++|+.
T Consensus 47 ~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gad-vn~~gG~l~stPLHWAar~G~~ 125 (600)
T KOG0509|consen 47 DIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGAD-VNAIGGVLGSTPLHWAARNGHI 125 (600)
T ss_pred hhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCC-ccccCCCCCCCcchHHHHcCcH
Confidence 466666666666666666662233555666666666666666666666666666666 33333 5556666666666666
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
.+|++|++.|++ .+.+|.+|.+|+|.|+..++.-++-+|+.+|+|++.
T Consensus 126 ~vv~lLlqhGAd------------pt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~ 173 (600)
T KOG0509|consen 126 SVVDLLLQHGAD------------PTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDL 173 (600)
T ss_pred HHHHHHHHcCCC------------CceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCC
Confidence 666666666666 366666666666666666666666666666666544
No 11
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90 E-value=2.5e-22 Score=161.09 Aligned_cols=141 Identities=18% Similarity=0.183 Sum_probs=119.8
Q ss_pred ccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcC
Q 038957 24 MDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAG 103 (169)
Q Consensus 24 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~ 103 (169)
+..+|+.|+..|+.+.++.|++.+.. ++..|..|.||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+|+..|
T Consensus 525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d-~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad-in~~d~~G~TpL~~A~~~g 602 (823)
T PLN03192 525 MASNLLTVASTGNAALLEELLKAKLD-PDIGDSKGRTPLHIAASKGYEDCVLVLLKHACN-VHIRDANGNTALWNAISAK 602 (823)
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCC-CCCcCCCCCCHHHHHHHhC
Confidence 46789999999999999999998865 678899999999999999999999999999888 7889999999999999989
Q ss_pred CHHHHHHHHhcCCCCCCC-------------CCCC------ccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 104 DPAIVSTLLNYVPAVKNG-------------TEAE------PESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~-------------~~~~------~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
+.+++++|++.++..... +... .+.+++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 603 ~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~ 682 (823)
T PLN03192 603 HHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD 682 (823)
T ss_pred CHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 888888888765543111 0000 055688999999999999999999999999999999987
Q ss_pred cc
Q 038957 165 SK 166 (169)
Q Consensus 165 ~~ 166 (169)
..
T Consensus 683 ~~ 684 (823)
T PLN03192 683 KA 684 (823)
T ss_pred CC
Confidence 64
No 12
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.89 E-value=7.2e-23 Score=156.42 Aligned_cols=133 Identities=21% Similarity=0.220 Sum_probs=120.0
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHH-hcchhccccCCCCCCHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILW-RQLSLLRKNNWKGETALLI 98 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~g~tpl~~ 98 (169)
+..+. +|||+|++.|+.+++..|+..|.+ ++.++.++.||||.|+++|++.+++.|++ .+..+.+..|-.|.||||+
T Consensus 270 d~dg~-tpLH~a~r~G~~~svd~Ll~~Ga~-I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHl 347 (929)
T KOG0510|consen 270 DNDGC-TPLHYAARQGGPESVDNLLGFGAS-INSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHL 347 (929)
T ss_pred cccCC-chHHHHHHcCChhHHHHHHHcCCc-ccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhh
Confidence 44444 589999999999999999999977 67778999999999999999999999999 6666788889999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCCcccccc--ccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 99 AARAGDPAIVSTLLNYVPAVKNGTEAEPESLLR--MTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 99 a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
|++.|+..++++|++.|+.. .+ ..|.+|.||||.|++.|+..+|+.|+.+|+++..
T Consensus 348 aa~~gH~~v~qlLl~~GA~~-----------~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~ 405 (929)
T KOG0510|consen 348 AAKSGHDRVVQLLLNKGALF-----------LNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGV 405 (929)
T ss_pred hhhcCHHHHHHHHHhcChhh-----------hcccccccCCchhhhHHHHhccHHHHHHHHHcCCceee
Confidence 99999999999999999995 43 4499999999999999999999999999999944
No 13
>PHA02741 hypothetical protein; Provisional
Probab=99.89 E-value=3.2e-22 Score=132.65 Aligned_cols=125 Identities=12% Similarity=0.148 Sum_probs=109.1
Q ss_pred cHHHHHHHHccCHHHHHHHHHHh-----hhhhccCCCCCCcHHHHHHHhCC----HHHHHHHHHhcchhccccCC-CCCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRM-----QNIFSTMSPRGNIVLHMAIRFQK----HKVVQEILWRQLSLLRKNNW-KGET 94 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~-----~~~~~~~~~~g~~~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~-~g~t 94 (169)
.++||.|+..|+.++++.|+... ...++..|..|.||||+|+..++ .+++++|+..+.+ ++.++. .|+|
T Consensus 22 ~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad-in~~~~~~g~T 100 (169)
T PHA02741 22 ENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD-INAQEMLEGDT 100 (169)
T ss_pred CCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC-CCCCCcCCCCC
Confidence 45899999999999999886431 23367788999999999999998 5889999998888 677774 8999
Q ss_pred HHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCC
Q 038957 95 ALLIAARAGDPAIVSTLLN-YVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTG 162 (169)
Q Consensus 95 pl~~a~~~~~~~~v~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~ 162 (169)
|||+|+..++.+++++|+. .+++ ++..|..|+||||+|+..++.+++++|++.++.
T Consensus 101 pLh~A~~~~~~~iv~~Ll~~~g~~------------~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 101 ALHLAAHRRDHDLAEWLCCQPGID------------LHFCNADNKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCC------------CCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 9999999999999999997 4766 688899999999999999999999999997654
No 14
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.89 E-value=4.4e-22 Score=136.14 Aligned_cols=127 Identities=12% Similarity=0.167 Sum_probs=78.5
Q ss_pred HHHHHHHHcc--CHHHHHHHHHHhhhhhccCC-CCCCcHHHHHHHh---CCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 26 HELLNVLRRE--DEHQIRLLAVRMQNIFSTMS-PRGNIVLHMAIRF---QKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 26 ~~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~-~~g~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
+|||.|+..+ +.++++.|++.++. ++..+ ..|.||||+|+.. ++.+++++|++.+.+ ++.+|..|.||||+|
T Consensus 53 TpLh~a~~~~~~~~eiv~~Ll~~gad-vn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gad-in~~d~~G~TpLh~a 130 (209)
T PHA02859 53 TPIFSCLEKDKVNVEILKFLIENGAD-VNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSS-ITEEDEDGKNLLHMY 130 (209)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHCCCC-CCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCC-CCCcCCCCCCHHHHH
Confidence 4566666533 56666666666544 33333 3566666665543 245666666666665 555666666666665
Q ss_pred HH--cCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHH-HHhhCcHHHHHHHHHcCCCcccc
Q 038957 100 AR--AGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHN-GVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 100 ~~--~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~-A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+. .++.+++++|++.|++ ++.+|..|.||||. |+..++.+++++|+++|++++..
T Consensus 131 ~~~~~~~~~iv~~Li~~gad------------in~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~ 188 (209)
T PHA02859 131 MCNFNVRINVIKLLIDSGVS------------FLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINET 188 (209)
T ss_pred HHhccCCHHHHHHHHHcCCC------------cccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCC
Confidence 54 2456666666666655 57777778888874 45566777888888888777643
No 15
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.89 E-value=3.6e-22 Score=151.97 Aligned_cols=126 Identities=22% Similarity=0.189 Sum_probs=113.8
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHc-C
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARA-G 103 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~-~ 103 (169)
.+|||.|+..|+.++++.|+..++. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|+.. +
T Consensus 169 ~tpLh~A~~~~~~~iv~~Ll~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~-in~~d~~g~TpLh~A~~~~~ 246 (477)
T PHA02878 169 NTALHYATENKDQRLTELLLSYGAN-VNIPDKTNNSPLHHAVKHYNKPIVHILLENGAS-TDARDKCGNTPLHISVGYCK 246 (477)
T ss_pred CCHHHHHHhCCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhcC
Confidence 4689999999999999999999865 677889999999999999999999999999988 888999999999999975 7
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCccccccccCC-CCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 104 DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEF-EGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+.+++++|++.|++ ++.++. .|.||||+| .++.+++++|+++|++++..
T Consensus 247 ~~~iv~~Ll~~gad------------vn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~ 296 (477)
T PHA02878 247 DYDILKLLLEHGVD------------VNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSL 296 (477)
T ss_pred CHHHHHHHHHcCCC------------CCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCc
Confidence 89999999999998 577765 799999999 46789999999999998764
No 16
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.89 E-value=2.7e-22 Score=152.70 Aligned_cols=79 Identities=28% Similarity=0.285 Sum_probs=42.7
Q ss_pred cCCC-CCCHHHHHHHcCCHHHHHHHHhcCCCCCC----CCCCCc-----------------cccccccCCCCCcHHHHHH
Q 038957 88 NNWK-GETALLIAARAGDPAIVSTLLNYVPAVKN----GTEAEP-----------------ESLLRMTEFEGNTSLHNGV 145 (169)
Q Consensus 88 ~~~~-g~tpl~~a~~~~~~~~v~~ll~~~~~~~~----~~~~~~-----------------~~~~~~~~~~~~t~l~~A~ 145 (169)
.+.. |.||||+|+..|+.+++++|++.|+++.. |..... +.+++.+|..|.||||+|+
T Consensus 163 ~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~ 242 (477)
T PHA02878 163 KDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISV 242 (477)
T ss_pred cCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 3444 56666666666666666666665555310 000000 1225666666667777666
Q ss_pred hh-CcHHHHHHHHHcCCCcccc
Q 038957 146 GE-YFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 146 ~~-~~~~~~~~Ll~~g~~~~~~ 166 (169)
.. ++.+++++|+++|++++..
T Consensus 243 ~~~~~~~iv~~Ll~~gadvn~~ 264 (477)
T PHA02878 243 GYCKDYDILKLLLEHGVDVNAK 264 (477)
T ss_pred HhcCCHHHHHHHHHcCCCCCcc
Confidence 54 4666666677666666543
No 17
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.89 E-value=6.9e-22 Score=148.86 Aligned_cols=138 Identities=17% Similarity=0.229 Sum_probs=70.9
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchh---------------------
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSL--------------------- 84 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~--------------------- 84 (169)
+|||.|+..|+.+++++|+..+.. ++..+..|.+|||.|+..|+.+++++|++.+.+.
T Consensus 37 tpL~~A~~~g~~~iv~~Ll~~Ga~-~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~ 115 (434)
T PHA02874 37 TPLIDAIRSGDAKIVELFIKHGAD-INHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGI 115 (434)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcC
Confidence 456666666666666666655543 3344444555555555555555555555433210
Q ss_pred -ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC----CCCCCc-----------------cccccccCCCCCcHHH
Q 038957 85 -LRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKN----GTEAEP-----------------ESLLRMTEFEGNTSLH 142 (169)
Q Consensus 85 -~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~----~~~~~~-----------------~~~~~~~~~~~~t~l~ 142 (169)
++.++..|.||||+|+..|+.+++++|++.|++... |..... +.+++..+..|.||||
T Consensus 116 d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~ 195 (434)
T PHA02874 116 DVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLH 195 (434)
T ss_pred CCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 223344455555555555555555555555444200 000000 1114556666667777
Q ss_pred HHHhhCcHHHHHHHHHcCCCcc
Q 038957 143 NGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 143 ~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
+|+..|+.+++++|+++|++++
T Consensus 196 ~A~~~g~~~iv~~Ll~~g~~i~ 217 (434)
T PHA02874 196 NAAEYGDYACIKLLIDHGNHIM 217 (434)
T ss_pred HHHHcCCHHHHHHHHhCCCCCc
Confidence 7776666677777776666654
No 18
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.89 E-value=6.2e-23 Score=148.85 Aligned_cols=132 Identities=19% Similarity=0.187 Sum_probs=122.4
Q ss_pred ccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcC
Q 038957 24 MDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAG 103 (169)
Q Consensus 24 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~ 103 (169)
..+||+.|+..|++++|+.|+..+.. +|.......|||-.||.-|+.++++||++++.+ ++..|..|.|.|++||..|
T Consensus 84 gappLWaAsaAGHl~vVk~L~~~ga~-VN~tT~TNStPLraACfDG~leivKyLvE~gad-~~IanrhGhTcLmIa~ykG 161 (615)
T KOG0508|consen 84 GAPPLWAASAAGHLEVVKLLLRRGAS-VNDTTRTNSTPLRAACFDGHLEIVKYLVEHGAD-PEIANRHGHTCLMIACYKG 161 (615)
T ss_pred CCchhhHHhccCcHHHHHHHHHhcCc-cccccccCCccHHHHHhcchhHHHHHHHHcCCC-CcccccCCCeeEEeeeccC
Confidence 35789999999999999999999954 677777888999999999999999999999998 8999999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccccccC
Q 038957 104 DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSKIKG 169 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 169 (169)
+.+|+++|++.|++ ++.++..|.|+||.|+..|+.+++++|+++|+.+.....|
T Consensus 162 h~~I~qyLle~gAD------------vn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~~G 215 (615)
T KOG0508|consen 162 HVDIAQYLLEQGAD------------VNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDGHG 215 (615)
T ss_pred chHHHHHHHHhCCC------------cchhcccCchHHHhhhhcccHHHHHHHHhCCceeeecCCC
Confidence 99999999999999 6999999999999999999999999999999988776554
No 19
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.89 E-value=6.3e-22 Score=135.39 Aligned_cols=125 Identities=12% Similarity=0.117 Sum_probs=109.3
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhC--CHHHHHHHHHhcchhccccC-CCCCCHHHHHHH
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQ--KHKVVQEILWRQLSLLRKNN-WKGETALLIAAR 101 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~-~~g~tpl~~a~~ 101 (169)
.+||++|+..|+++.++.|+.. .+..+..|.||||+|+..+ +.+++++|++.+++ ++.++ ..|.||||+|+.
T Consensus 22 ~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gad-vn~~~~~~g~TpLh~a~~ 96 (209)
T PHA02859 22 CNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGAD-VNFKTRDNNLSALHHYLS 96 (209)
T ss_pred CcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCC-CCccCCCCCCCHHHHHHH
Confidence 4689999999999999999865 3567888999999999855 89999999999998 66675 589999999876
Q ss_pred c---CCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhh--CcHHHHHHHHHcCCCcccc
Q 038957 102 A---GDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGE--YFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 102 ~---~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~--~~~~~~~~Ll~~g~~~~~~ 166 (169)
. ++.+++++|++.|++ ++.+|..|.||||+|+.. ++.+++++|+++|++++..
T Consensus 97 ~~~~~~~eiv~~Ll~~gad------------in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~ 154 (209)
T PHA02859 97 FNKNVEPEILKILIDSGSS------------ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNK 154 (209)
T ss_pred hCccccHHHHHHHHHCCCC------------CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc
Confidence 4 479999999999998 699999999999998764 6899999999999998654
No 20
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.88 E-value=5.7e-22 Score=129.65 Aligned_cols=130 Identities=13% Similarity=0.101 Sum_probs=105.4
Q ss_pred CCcccHHHHHHHHccCHHHHHHHHHH----hhhhhccCCCCCCcHHHHHHHhCCH---HHHHHHHHhcchhccccC-CCC
Q 038957 21 PTTMDHELLNVLRREDEHQIRLLAVR----MQNIFSTMSPRGNIVLHMAIRFQKH---KVVQEILWRQLSLLRKNN-WKG 92 (169)
Q Consensus 21 ~~~~~~~l~~a~~~g~~~~~~~ll~~----~~~~~~~~~~~g~~~l~~a~~~~~~---~~~~~ll~~~~~~~~~~~-~~g 92 (169)
..+ .+|||+|++.|+...+...... ........+..|.||||+|+..++. +++++|+..+.+ ++.++ ..|
T Consensus 15 ~~g-~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad-in~~~~~~g 92 (154)
T PHA02736 15 IEG-ENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD-INGKERVFG 92 (154)
T ss_pred CCC-CCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCC-ccccCCCCC
Confidence 344 4589999999985332221111 1223445688999999999999986 468899999988 77777 589
Q ss_pred CCHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 93 ETALLIAARAGDPAIVSTLLNY-VPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 93 ~tpl~~a~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
+||||+|+..++.+++++|+.. +++ ++.++..|.||||+|+..++.+++++|+++|++..
T Consensus 93 ~T~Lh~A~~~~~~~i~~~Ll~~~g~d------------~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 93 NTPLHIAVYTQNYELATWLCNQPGVN------------MEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCC------------CccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999974 666 68899999999999999999999999999999864
No 21
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.88 E-value=4.9e-22 Score=151.94 Aligned_cols=133 Identities=20% Similarity=0.176 Sum_probs=118.0
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhh--------------hhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhc
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQ--------------NIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLL 85 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~--------------~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~ 85 (169)
...+..+|||.|+..|++++++..|+.+. .+++..|.+|+||||+|++.|+.++++.|+..|.+ +
T Consensus 221 ~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~-I 299 (929)
T KOG0510|consen 221 DNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGAS-I 299 (929)
T ss_pred ccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCc-c
Confidence 34555679999999999999999997654 34456788999999999999999999999999999 8
Q ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 86 RKNNWKGETALLIAARAGDPAIVSTLLN-YVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 86 ~~~~~~g~tpl~~a~~~~~~~~v~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
+.++.++.||||.|+++|+.+.|+.|++ .+-- +++..|..|.||||.|++.||..++++|++.|+...
T Consensus 300 ~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~r-----------llne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 300 NSKNKDEESPLHFAAIYGRINTVERLLQESDTR-----------LLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFL 368 (929)
T ss_pred cccCCCCCCchHHHHHcccHHHHHHHHhCcCcc-----------ccccccccCCCchhhhhhcCHHHHHHHHHhcChhhh
Confidence 8899999999999999999999999999 3333 377889999999999999999999999999999875
No 22
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.88 E-value=1.7e-21 Score=148.42 Aligned_cols=124 Identities=19% Similarity=0.225 Sum_probs=73.4
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCC------CcHHHHHHHhCC--HHHHHHHHHhcchhccccCCCCCCHHHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRG------NIVLHMAIRFQK--HKVVQEILWRQLSLLRKNNWKGETALLI 98 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g------~~~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~g~tpl~~ 98 (169)
|||.|+..|+.++++.|++.+.. ++..+..| .||||.|+..++ .+++++|++.+.+ ++.+|..|.||||+
T Consensus 179 pL~~A~~~~~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~d-in~~d~~g~TpL~~ 256 (480)
T PHA03100 179 PLHIAVEKGNIDVIKFLLDNGAD-INAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVP-INIKDVYGFTPLHY 256 (480)
T ss_pred HHHHHHHhCCHHHHHHHHHcCCC-ccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCC-CCCCCCCCCCHHHH
Confidence 45555555555555555555432 23333334 455555555555 5555555555554 45556666666666
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 99 AARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 99 a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
|+..++.+++++|++.|++ ++.+|..|.||+++|+..++.+++++|+++|++++
T Consensus 257 A~~~~~~~iv~~Ll~~gad------------~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~ 310 (480)
T PHA03100 257 AVYNNNPEFVKYLLDLGAN------------PNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIK 310 (480)
T ss_pred HHHcCCHHHHHHHHHcCCC------------CCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHH
Confidence 6666666666666666665 46666666677777766666667777776666654
No 23
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.88 E-value=3.1e-21 Score=137.16 Aligned_cols=126 Identities=11% Similarity=0.012 Sum_probs=109.0
Q ss_pred CCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccC----CCCCCcHHHHHHHhCCHHHHHHHHHhcchhcccc-CCCC
Q 038957 18 QELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTM----SPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKN-NWKG 92 (169)
Q Consensus 18 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~----~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~g 92 (169)
..+..+.+++||.|+..|+.++++.|++.|+. ++.. +..|.||||+|+..++.+++++|++.+++ ++.+ +..|
T Consensus 27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAd-iN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GAD-VN~~~~~~g 104 (300)
T PHA02884 27 KKNKICIANILYSSIKFHYTDIIDAILKLGAD-PEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGAD-VNRYAEEAK 104 (300)
T ss_pred ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCC-ccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cCcccCCCC
Confidence 34566778999999999999999999999975 4544 45799999999999999999999999998 6765 5679
Q ss_pred CCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHH
Q 038957 93 ETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLH 157 (169)
Q Consensus 93 ~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll 157 (169)
.||||+|+..++.+++++|+..|++ ++.+|..|.||+|+|+..++.+++.++.
T Consensus 105 ~TpLh~Aa~~~~~eivklLL~~GAd------------in~kd~~G~TpL~~A~~~~~~~~~~~~~ 157 (300)
T PHA02884 105 ITPLYISVLHGCLKCLEILLSYGAD------------INIQTNDMVTPIELALMICNNFLAFMIC 157 (300)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCC------------CCCCCCCCCCHHHHHHHhCChhHHHHhc
Confidence 9999999999999999999999999 6899999999999999877655554443
No 24
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.87 E-value=3.5e-21 Score=146.69 Aligned_cols=127 Identities=20% Similarity=0.177 Sum_probs=88.8
Q ss_pred HHHHH-----HHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHH--HhCCHHHHHHHHHhcchhccccCCCCCCHHHH
Q 038957 26 HELLN-----VLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAI--RFQKHKVVQEILWRQLSLLRKNNWKGETALLI 98 (169)
Q Consensus 26 ~~l~~-----a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~--~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~ 98 (169)
+|||. |+..++.++++.|++.++.+ +..+..|.||||+|+ ..|+.+++++|++.+.+ ++..+..|.||||+
T Consensus 70 t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i-~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~ 147 (480)
T PHA03100 70 TPLHYLSNIKYNLTDVKEIVKLLLEYGANV-NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGAN-VNIKNSDGENLLHL 147 (480)
T ss_pred CHHHHHHHHHHHhhchHHHHHHHHHCCCCC-CCCCCCCCchhhHHHhcccChHHHHHHHHHcCCC-CCccCCCCCcHHHH
Confidence 45666 66666666666666666542 555666666666666 66666666666666665 55566666666666
Q ss_pred HHHcC--CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 99 AARAG--DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 99 a~~~~--~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
|+..+ +.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|++++..
T Consensus 148 A~~~~~~~~~iv~~Ll~~g~d------------in~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~ 205 (480)
T PHA03100 148 YLESNKIDLKILKLLIDKGVD------------INAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAG 205 (480)
T ss_pred HHHcCCChHHHHHHHHHCCCC------------cccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCC
Confidence 66666 66666666666666 5777788888888888888888888888888887643
No 25
>PHA02795 ankyrin-like protein; Provisional
Probab=99.87 E-value=2e-21 Score=143.35 Aligned_cols=128 Identities=13% Similarity=0.004 Sum_probs=111.0
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCC-----CCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMS-----PRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAA 100 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-----~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~ 100 (169)
+++|.|+..++.+++++|++.+....+..+ ..+.+++|.|...++.+++++|+..+++ ++.+|..|.||||+|+
T Consensus 151 t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GAD-IN~kD~~G~TpLh~Aa 229 (437)
T PHA02795 151 NAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIED-INQLDAGGRTLLYRAI 229 (437)
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCC-cCcCCCCCCCHHHHHH
Confidence 578888888899999988888853322221 2367888999999999999999999988 7889999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhC--------cHHHHHHHHHcCCCcccc
Q 038957 101 RAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEY--------FIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 101 ~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~--------~~~~~~~Ll~~g~~~~~~ 166 (169)
..|+.+++++|++.|++ ++.+|..|.||||+|+..| +.+++++|+++|+++++.
T Consensus 230 ~~g~~eiVelLL~~GAd------------IN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~ 291 (437)
T PHA02795 230 YAGYIDLVSWLLENGAN------------VNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCI 291 (437)
T ss_pred HcCCHHHHHHHHHCCCC------------CCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCch
Confidence 99999999999999999 6999999999999999988 469999999999998764
No 26
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.86 E-value=4.5e-21 Score=122.71 Aligned_cols=125 Identities=18% Similarity=0.084 Sum_probs=112.2
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
..+.+|+..+.+..|+.||+..+..++..|.+|+||||-|+.+|+.++++.|+..+++ ...+...||||||-||.-++.
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn-~~a~T~~GWTPLhSAckWnN~ 143 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN-KEAKTNEGWTPLHSACKWNNF 143 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCC-cccccccCccchhhhhcccch
Confidence 4588999999999999999999888999999999999999999999999999999999 888999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCc-HHHHHHHHH-cCCCc
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYF-IKLYKSLHA-RGTGV 163 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~-~~~~~~Ll~-~g~~~ 163 (169)
+++..|+++|++ ++.......||||.|+..++ ...+++|+. ++++.
T Consensus 144 ~va~~LLqhgaD------------VnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~p 191 (228)
T KOG0512|consen 144 EVAGRLLQHGAD------------VNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHP 191 (228)
T ss_pred hHHHHHHhccCc------------ccccccccchhhHHhhcccchHHHHHHHhhccccCh
Confidence 999999999999 69999999999999988764 556666654 44443
No 27
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.86 E-value=1.3e-20 Score=147.44 Aligned_cols=132 Identities=17% Similarity=0.127 Sum_probs=98.4
Q ss_pred CCCcccHHHHHHHHccC--HHHHHHHHHHhhhhhccCCCCCCcHHHHH--------------------------------
Q 038957 20 LPTTMDHELLNVLRRED--EHQIRLLAVRMQNIFSTMSPRGNIVLHMA-------------------------------- 65 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~--~~~~~~ll~~~~~~~~~~~~~g~~~l~~a-------------------------------- 65 (169)
+..+. +|||.|+..|+ .++++.|++.|+. ++..+..|+||||.|
T Consensus 209 D~~G~-TPLH~Aa~~g~~~~eIVklLLe~GAD-VN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~ 286 (764)
T PHA02716 209 NNHLI-TPLHTYLITGNVCASVIKKIIELGGD-MDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILH 286 (764)
T ss_pred CCCCC-CHHHHHHHcCCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhH
Confidence 33443 47888887774 3777778877754 566777788887754
Q ss_pred -----HHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHH--cCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCC
Q 038957 66 -----IRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAAR--AGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGN 138 (169)
Q Consensus 66 -----~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~--~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (169)
+..|+.+++++|++.+++ ++.+|..|+||||+|+. .++.+++++|++.|++ ++.+|..|+
T Consensus 287 ~~i~AA~~g~leiVklLLe~GAd-IN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GAD------------IN~kD~~G~ 353 (764)
T PHA02716 287 SYITLARNIDISVVYSFLQPGVK-LHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGND------------LNEPDNIGN 353 (764)
T ss_pred HHHHHHHcCCHHHHHHHHhCCCc-eeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCC------------CccCCCCCC
Confidence 234566777777777776 66777788888887653 4567788888887777 689999999
Q ss_pred cHHHHHHh--------------hCcHHHHHHHHHcCCCcccc
Q 038957 139 TSLHNGVG--------------EYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 139 t~l~~A~~--------------~~~~~~~~~Ll~~g~~~~~~ 166 (169)
||||+|+. .++.+++++|+++|++++..
T Consensus 354 TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~k 395 (764)
T PHA02716 354 TVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAV 395 (764)
T ss_pred CHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCc
Confidence 99999865 36889999999999998754
No 28
>PHA02946 ankyin-like protein; Provisional
Probab=99.86 E-value=2.1e-20 Score=140.73 Aligned_cols=144 Identities=11% Similarity=0.046 Sum_probs=87.1
Q ss_pred CCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCC--HHHHHHHHHhcchhccccCCCCCCHH
Q 038957 19 ELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQK--HKVVQEILWRQLSLLRKNNWKGETAL 96 (169)
Q Consensus 19 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~g~tpl 96 (169)
.+..+. +|||.|+..|+.++++.|++.++. ++..|..|.||||+|+..+. .+++++|++.++++....+..|.|||
T Consensus 68 ~d~~G~-TpLh~Aa~~g~~eiv~lLL~~GAd-in~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL 145 (446)
T PHA02946 68 TDDDGN-YPLHIASKINNNRIVAMLLTHGAD-PNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPL 145 (446)
T ss_pred cCCCCC-CHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHH
Confidence 344443 367777777777777777777654 45667777777777766553 66777777777663223566677777
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCC----CCCCCC-------------------ccccccccCCCCCcHHHHHHhhC--cHH
Q 038957 97 LIAARAGDPAIVSTLLNYVPAVK----NGTEAE-------------------PESLLRMTEFEGNTSLHNGVGEY--FIK 151 (169)
Q Consensus 97 ~~a~~~~~~~~v~~ll~~~~~~~----~~~~~~-------------------~~~~~~~~~~~~~t~l~~A~~~~--~~~ 151 (169)
| |+..++.+++++|++.+++.. .|.... .+.+++.+|..|.||||+|+..+ +.+
T Consensus 146 ~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~ 224 (446)
T PHA02946 146 L-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVD 224 (446)
T ss_pred H-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHH
Confidence 5 445566677777776665531 111100 03445556666667777666654 556
Q ss_pred HHHHHHHcCCCcccc
Q 038957 152 LYKSLHARGTGVFSK 166 (169)
Q Consensus 152 ~~~~Ll~~g~~~~~~ 166 (169)
++++|++ |++++..
T Consensus 225 iv~lLl~-gadin~~ 238 (446)
T PHA02946 225 IINLLLP-STDVNKQ 238 (446)
T ss_pred HHHHHHc-CCCCCCC
Confidence 6666663 6665543
No 29
>PHA03095 ankyrin-like protein; Provisional
Probab=99.85 E-value=3.3e-20 Score=141.04 Aligned_cols=134 Identities=16% Similarity=0.147 Sum_probs=107.9
Q ss_pred CCCCCCcccHHHHHHHHcc---CHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhC-CHHHHHHHHHhcchhccccCCCC
Q 038957 17 DQELPTTMDHELLNVLRRE---DEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQ-KHKVVQEILWRQLSLLRKNNWKG 92 (169)
Q Consensus 17 ~~~~~~~~~~~l~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~-~~~~~~~ll~~~~~~~~~~~~~g 92 (169)
+..+..+ .+|||.|+..+ +.++++.|++.+.. ++..+..|.||||+|+..+ ..+++++|++.+.+ ++.++..|
T Consensus 41 n~~~~~g-~t~Lh~a~~~~~~~~~~iv~~Ll~~Gad-in~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~-in~~~~~g 117 (471)
T PHA03095 41 NFRGEYG-KTPLHLYLHYSSEKVKDIVRLLLEAGAD-VNAPERCGFTPLHLYLYNATTLDVIKLLIKAGAD-VNAKDKVG 117 (471)
T ss_pred ccCCCCC-CCHHHHHHHhcCCChHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCC-CCCCCCCC
Confidence 3333344 45899999988 99999999999865 6778889999999999999 59999999999888 78889999
Q ss_pred CCHHHHHH--HcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhC--cHHHHHHHHHcCCCccc
Q 038957 93 ETALLIAA--RAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEY--FIKLYKSLHARGTGVFS 165 (169)
Q Consensus 93 ~tpl~~a~--~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~--~~~~~~~Ll~~g~~~~~ 165 (169)
.||||+|+ ..++.+++++|++.|++ ++.+|..|.||||+|+..+ ..+++++|+++|++++.
T Consensus 118 ~tpLh~a~~~~~~~~~iv~~Ll~~gad------------~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~ 182 (471)
T PHA03095 118 RTPLHVYLSGFNINPKVIRLLLRKGAD------------VNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYA 182 (471)
T ss_pred CCHHHHHhhCCcCCHHHHHHHHHcCCC------------CCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcc
Confidence 99999999 45678999999999888 4667777777777776654 46777777777776643
No 30
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.85 E-value=9.5e-20 Score=139.27 Aligned_cols=149 Identities=14% Similarity=0.155 Sum_probs=111.7
Q ss_pred CCCCCCcccHHHHHHHHc---cCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHh--CCHHHHHHHHHhcchhccc-cCC
Q 038957 17 DQELPTTMDHELLNVLRR---EDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRF--QKHKVVQEILWRQLSLLRK-NNW 90 (169)
Q Consensus 17 ~~~~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~--~~~~~~~~ll~~~~~~~~~-~~~ 90 (169)
+..+..+. +|||.|+.. ++.+++++|++.|..+.+..+..|.||||+|+.. ++.+++++|++.+.+ ++. .+.
T Consensus 102 n~~d~~g~-tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gad-i~~~~~~ 179 (494)
T PHA02989 102 NLKTFNGV-SPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVN-LFEKTSL 179 (494)
T ss_pred CCCCCCCC-cHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCC-ccccccc
Confidence 33344443 578877654 6788888888888653256778888999888754 578888888888887 444 577
Q ss_pred CCCCHHHHHHHcC----CHHHHHHHHhcCCCCCCCCC----CC----------------------ccccccccCCCCCcH
Q 038957 91 KGETALLIAARAG----DPAIVSTLLNYVPAVKNGTE----AE----------------------PESLLRMTEFEGNTS 140 (169)
Q Consensus 91 ~g~tpl~~a~~~~----~~~~v~~ll~~~~~~~~~~~----~~----------------------~~~~~~~~~~~~~t~ 140 (169)
.|.||||+|++.+ +.+++++|++.|++....+. .. .+.+++.+|..|+||
T Consensus 180 ~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~Tp 259 (494)
T PHA02989 180 YGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNP 259 (494)
T ss_pred cCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCH
Confidence 8889988887654 78889999988887632111 00 034567889999999
Q ss_pred HHHHHhhCcHHHHHHHHHcCCCccccc
Q 038957 141 LHNGVGEYFIKLYKSLHARGTGVFSKI 167 (169)
Q Consensus 141 l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 167 (169)
||+|+..++.+++++|+++|++++...
T Consensus 260 L~~Aa~~~~~~~v~~LL~~Gadin~~d 286 (494)
T PHA02989 260 LLISAKVDNYEAFNYLLKLGDDIYNVS 286 (494)
T ss_pred HHHHHHhcCHHHHHHHHHcCCCccccC
Confidence 999999999999999999999987654
No 31
>PHA03095 ankyrin-like protein; Provisional
Probab=99.85 E-value=4.9e-20 Score=140.11 Aligned_cols=126 Identities=20% Similarity=0.148 Sum_probs=101.4
Q ss_pred cHHHHHHHHc--cCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCH--HHHHHHHHhcchhccccCCCCCCHHHHHH
Q 038957 25 DHELLNVLRR--EDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKH--KVVQEILWRQLSLLRKNNWKGETALLIAA 100 (169)
Q Consensus 25 ~~~l~~a~~~--g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~--~~~~~ll~~~~~~~~~~~~~g~tpl~~a~ 100 (169)
.++||.++.. ++.++++.|+..+.. ++..|..|.||||+|+..++. .++..++..+.+ ++.+|..|+||||+|+
T Consensus 188 ~t~Lh~~~~~~~~~~~i~~~Ll~~g~~-~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~d-in~~d~~g~TpLh~A~ 265 (471)
T PHA03095 188 RSLLHHHLQSFKPRARIVRELIRAGCD-PAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGIS-INARNRYGQTPLHYAA 265 (471)
T ss_pred CCHHHHHHHHCCCcHHHHHHHHHcCCC-CcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCC-CCCcCCCCCCHHHHHH
Confidence 3467777654 566777777777644 567778888888888888764 567777777777 7788888999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 101 RAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 101 ~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
..|+.+++++|++.|++ ++.+|..|.||||.|+.+++.++++.|+++++++.
T Consensus 266 ~~~~~~~v~~LL~~gad------------~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~ 317 (471)
T PHA03095 266 VFNNPRACRRLIALGAD------------INAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE 317 (471)
T ss_pred HcCCHHHHHHHHHcCCC------------CcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHH
Confidence 99999999999988888 58888889999999999999999999998888764
No 32
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.84 E-value=4.5e-20 Score=144.47 Aligned_cols=128 Identities=18% Similarity=0.122 Sum_probs=107.6
Q ss_pred cHHHHHHHHc--cCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCC--HHHHHHHHHhcchhccccCCCCCCHHHHHH
Q 038957 25 DHELLNVLRR--EDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQK--HKVVQEILWRQLSLLRKNNWKGETALLIAA 100 (169)
Q Consensus 25 ~~~l~~a~~~--g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~ 100 (169)
.+|||.|+.. ++.+++++|++.+.. ++..+..|.||||+|+..|+ .+++++|++.|++ ++.++..|+||||+|+
T Consensus 178 ~TpLH~A~~n~~~~~eIVklLLe~GAD-VN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GAD-VN~kD~~G~TPLh~Ai 255 (764)
T PHA02716 178 YGILHAYLGNMYVDIDILEWLCNNGVN-VNLQNNHLITPLHTYLITGNVCASVIKKIIELGGD-MDMKCVNGMSPIMTYI 255 (764)
T ss_pred CcHHHHHHHhccCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH
Confidence 4689988654 678999999999865 77889999999999999995 5899999999998 8889999999999753
Q ss_pred -------------------------------------HcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHH
Q 038957 101 -------------------------------------RAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHN 143 (169)
Q Consensus 101 -------------------------------------~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~ 143 (169)
..|+.+++++|++.|++ ++.+|..|+||||+
T Consensus 256 ~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAd------------IN~kD~~G~TPLH~ 323 (764)
T PHA02716 256 INIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVK------------LHYKDSAGRTCLHQ 323 (764)
T ss_pred HhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCc------------eeccCCCCCCHHHH
Confidence 34566667777776666 68899999999999
Q ss_pred HHh--hCcHHHHHHHHHcCCCcccc
Q 038957 144 GVG--EYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 144 A~~--~~~~~~~~~Ll~~g~~~~~~ 166 (169)
|+. .++.+++++|+++|++++..
T Consensus 324 Aaa~~~~~~eIVklLLe~GADIN~k 348 (764)
T PHA02716 324 YILRHNISTDIIKLLHEYGNDLNEP 348 (764)
T ss_pred HHHHhCCCchHHHHHHHcCCCCccC
Confidence 864 45789999999999998754
No 33
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.84 E-value=1.3e-19 Score=143.41 Aligned_cols=139 Identities=18% Similarity=0.180 Sum_probs=107.0
Q ss_pred HHHHHHHHcc-CHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhC-CHHHHHHHHHhcchhccccCCCCCCHHHHHHHcC
Q 038957 26 HELLNVLRRE-DEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQ-KHKVVQEILWRQLSLLRKNNWKGETALLIAARAG 103 (169)
Q Consensus 26 ~~l~~a~~~g-~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~-~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~ 103 (169)
+|||.|+..| +.+.++.|+..+.. ++..+..|.||||+|+..+ ..++++.|+..+.+ ++.+|..|.||||+|+..+
T Consensus 309 TpLh~Aa~~g~~~~~v~~Ll~~gad-in~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gad-in~~d~~G~TpLh~Aa~~~ 386 (682)
T PHA02876 309 TPLYLMAKNGYDTENIRTLIMLGAD-VNAADRLYITPLHQASTLDRNKDIVITLLELGAN-VNARDYCDKTPIHYAAVRN 386 (682)
T ss_pred CHHHHHHHhCCCHHHHHHHHHcCCC-CCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCC-CccCCCCCCCHHHHHHHcC
Confidence 4677777777 47777777777644 5566777788888877754 56777778887777 7778888999999999999
Q ss_pred CHHHHHHHHhcCCCCCC----CCCCC------------------ccccccccCCCCCcHHHHHHhhC-cHHHHHHHHHcC
Q 038957 104 DPAIVSTLLNYVPAVKN----GTEAE------------------PESLLRMTEFEGNTSLHNGVGEY-FIKLYKSLHARG 160 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~----~~~~~------------------~~~~~~~~~~~~~t~l~~A~~~~-~~~~~~~Ll~~g 160 (169)
+.+++++|++.|++... |.... .+.+++.+|..|+||||+|+..+ +.+++++|+++|
T Consensus 387 ~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~G 466 (682)
T PHA02876 387 NVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNG 466 (682)
T ss_pred CHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCC
Confidence 99999999998887632 11100 04567889999999999999877 689999999999
Q ss_pred CCcccc
Q 038957 161 TGVFSK 166 (169)
Q Consensus 161 ~~~~~~ 166 (169)
++++..
T Consensus 467 ad~n~~ 472 (682)
T PHA02876 467 ADVNAI 472 (682)
T ss_pred CCCCCC
Confidence 998754
No 34
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.84 E-value=4.5e-20 Score=109.84 Aligned_cols=87 Identities=28% Similarity=0.337 Sum_probs=73.0
Q ss_pred HHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHH
Q 038957 62 LHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSL 141 (169)
Q Consensus 62 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l 141 (169)
||+|+..++.+++++|++.+.. ++. |+||||+|+..|+.+++++|++.+++ ++.+|..|+|||
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~-~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~------------~~~~~~~g~t~L 63 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGAD-INL----GNTALHYAAENGNLEIVKLLLENGAD------------INSQDKNGNTAL 63 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTST-TTS----SSBHHHHHHHTTTHHHHHHHHHTTTC------------TT-BSTTSSBHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCC-CCC----CCCHHHHHHHcCCHHHHHHHHHhccc------------ccccCCCCCCHH
Confidence 6889999999999999987765 332 78899999999999999999998888 588888999999
Q ss_pred HHHHhhCcHHHHHHHHHcCCCccc
Q 038957 142 HNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 142 ~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
|+|+.+++.+++++|+++|++++.
T Consensus 64 ~~A~~~~~~~~~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 64 HYAAENGNLEIVKLLLEHGADVNI 87 (89)
T ss_dssp HHHHHTTHHHHHHHHHHTTT-TTS
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999999999999999999988865
No 35
>PHA02798 ankyrin-like protein; Provisional
Probab=99.84 E-value=1.1e-19 Score=138.76 Aligned_cols=139 Identities=12% Similarity=0.061 Sum_probs=89.2
Q ss_pred HHHHHHHHc-----cCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhC---CHHHHHHHHHhcchhccccCCCCCCHHH
Q 038957 26 HELLNVLRR-----EDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQ---KHKVVQEILWRQLSLLRKNNWKGETALL 97 (169)
Q Consensus 26 ~~l~~a~~~-----g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~g~tpl~ 97 (169)
+|||.++.. +..++++.|++.|+. ++..+..|.||||+|+..+ +.+++++|++.|++ ++.+|..|.||||
T Consensus 73 TpL~~~~~n~~~~~~~~~iv~~Ll~~Gad-iN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~tpL~ 150 (489)
T PHA02798 73 TPLCTILSNIKDYKHMLDIVKILIENGAD-INKKNSDGETPLYCLLSNGYINNLEILLFMIENGAD-TTLLDKDGFTMLQ 150 (489)
T ss_pred ChHHHHHHhHHhHHhHHHHHHHHHHCCCC-CCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCC-ccccCCCCCcHHH
Confidence 356655432 455666666666544 4555566666666666554 45666666666655 5556666666666
Q ss_pred HHHHcCC---HHHHHHHHhcCCCCCC-----C-------------------------------------CCCCc------
Q 038957 98 IAARAGD---PAIVSTLLNYVPAVKN-----G-------------------------------------TEAEP------ 126 (169)
Q Consensus 98 ~a~~~~~---~~~v~~ll~~~~~~~~-----~-------------------------------------~~~~~------ 126 (169)
+|++.++ .+++++|++.|++... | ....+
T Consensus 151 ~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l 230 (489)
T PHA02798 151 VYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSL 230 (489)
T ss_pred HHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHH
Confidence 6666555 5666666666554310 0 00000
Q ss_pred -----------------cccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 127 -----------------ESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 127 -----------------~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
..+++.+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 231 ~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~ 287 (489)
T PHA02798 231 LYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINII 287 (489)
T ss_pred HhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCccccc
Confidence 2356778889999999999999999999999999998754
No 36
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.84 E-value=1.9e-20 Score=148.06 Aligned_cols=127 Identities=13% Similarity=0.142 Sum_probs=112.9
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHH--------------------------------------
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAI-------------------------------------- 66 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~-------------------------------------- 66 (169)
.+|||.|+..|+.+.|+.|+++.|......|..|.||||+|+
T Consensus 42 ~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (682)
T PHA02876 42 FTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDEAC 121 (682)
T ss_pred chHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHHHH
Confidence 368999999999999999999998766777888999999665
Q ss_pred --------------------------------HhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Q 038957 67 --------------------------------RFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNY 114 (169)
Q Consensus 67 --------------------------------~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~ 114 (169)
..++.+++++|++.+.+ ++.+|..|.||||+|+..|+.++|++|++.
T Consensus 122 ~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gad-vn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~ 200 (682)
T PHA02876 122 IHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGGAD-VNAKDIYCITPIHYAAERGNAKMVNLLLSY 200 (682)
T ss_pred HHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Confidence 44667889999999988 788999999999999999999999999999
Q ss_pred CCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 115 VPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
|++ ++..+..|.||||+|+..++.++++.|++.+++++
T Consensus 201 Gad------------~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~ 238 (682)
T PHA02876 201 GAD------------VNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNIN 238 (682)
T ss_pred CCC------------cCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 998 58888999999999999999999998888777654
No 37
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84 E-value=8.6e-21 Score=137.86 Aligned_cols=120 Identities=18% Similarity=0.117 Sum_probs=112.1
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
-+||..||..|+++++++|++++.+ ++..+..|.|.||+||..|+.+++++|++.+++ ++.++..|+|+||.|+++|+
T Consensus 118 StPLraACfDG~leivKyLvE~gad-~~IanrhGhTcLmIa~ykGh~~I~qyLle~gAD-vn~ks~kGNTALH~caEsG~ 195 (615)
T KOG0508|consen 118 STPLRAACFDGHLEIVKYLVEHGAD-PEIANRHGHTCLMIACYKGHVDIAQYLLEQGAD-VNAKSYKGNTALHDCAESGS 195 (615)
T ss_pred CccHHHHHhcchhHHHHHHHHcCCC-CcccccCCCeeEEeeeccCchHHHHHHHHhCCC-cchhcccCchHHHhhhhccc
Confidence 3689999999999999999988865 678899999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHAR 159 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 159 (169)
.+++++|+..++. -..|..|.|||-.|+..|+.++|++|+..
T Consensus 196 vdivq~Ll~~ga~-------------i~~d~~GmtPL~~Aa~tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 196 VDIVQLLLKHGAK-------------IDVDGHGMTPLLLAAVTGHTDIVERLLQC 237 (615)
T ss_pred HHHHHHHHhCCce-------------eeecCCCCchHHHHhhhcchHHHHHHhcC
Confidence 9999999999988 44678899999999999999999999964
No 38
>PHA02946 ankyin-like protein; Provisional
Probab=99.84 E-value=1.2e-19 Score=136.71 Aligned_cols=143 Identities=17% Similarity=0.137 Sum_probs=114.8
Q ss_pred CcccHHHHHHH--HccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 22 TTMDHELLNVL--RREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 22 ~~~~~~l~~a~--~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
.+...+||.++ ...+.++++.|++.+.. ++..+..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|
T Consensus 35 ~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAd-in~~d~~g~TpLh~A 112 (446)
T PHA02946 35 SGNYHILHAYCGIKGLDERFVEELLHRGYS-PNETDDDGNYPLHIASKINNNRIVAMLLTHGAD-PNACDKQHKTPLYYL 112 (446)
T ss_pred CCCChHHHHHHHhcCCCHHHHHHHHHCcCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHH
Confidence 33456788765 44578899999999865 688899999999999999999999999999988 788999999999999
Q ss_pred HHcCC--HHHHHHHHhcCCCCCC-----CCCCCc----------------cccccccCCCCCcHHHHHHhhC--cHHHHH
Q 038957 100 ARAGD--PAIVSTLLNYVPAVKN-----GTEAEP----------------ESLLRMTEFEGNTSLHNGVGEY--FIKLYK 154 (169)
Q Consensus 100 ~~~~~--~~~v~~ll~~~~~~~~-----~~~~~~----------------~~~~~~~~~~~~t~l~~A~~~~--~~~~~~ 154 (169)
+..++ .+++++|++.|++... |..... +.+++.+|..|+||||+|+..+ +.++++
T Consensus 113 ~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~ 192 (446)
T PHA02946 113 SGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTIS 192 (446)
T ss_pred HHcCCchHHHHHHHHHcCCCcccccCCCCCcHHHHHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHH
Confidence 88664 7899999999988631 111110 4556778888999998887654 468889
Q ss_pred HHHHcCCCcccc
Q 038957 155 SLHARGTGVFSK 166 (169)
Q Consensus 155 ~Ll~~g~~~~~~ 166 (169)
+|+++|++++..
T Consensus 193 ~Ll~~Gadin~~ 204 (446)
T PHA02946 193 WMMKLGISPSKP 204 (446)
T ss_pred HHHHcCCCCccc
Confidence 999999988754
No 39
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.83 E-value=2.3e-19 Score=137.20 Aligned_cols=132 Identities=19% Similarity=0.234 Sum_probs=109.8
Q ss_pred CCCcccHHHHHHHHc--cCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhC----CHHHHHHHHHhcchh---------
Q 038957 20 LPTTMDHELLNVLRR--EDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQ----KHKVVQEILWRQLSL--------- 84 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~--g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~----~~~~~~~ll~~~~~~--------- 84 (169)
+..+. +|||.|+.. ++.++++.|++.|..+....+..|.||||+|+..+ +.+++++|++.|.++
T Consensus 142 d~~g~-tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t 220 (494)
T PHA02989 142 NSRGY-NLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSES 220 (494)
T ss_pred CCCCC-CHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCcccc
Confidence 34454 589998764 68899999999987633335678999999987764 789999999876531
Q ss_pred ----------------------------ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCC
Q 038957 85 ----------------------------LRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFE 136 (169)
Q Consensus 85 ----------------------------~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 136 (169)
++.+|..|+||||+|+..++.+++++|++.|++ ++.+|..
T Consensus 221 ~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gad------------in~~d~~ 288 (494)
T PHA02989 221 VLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDD------------IYNVSKD 288 (494)
T ss_pred HHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCC------------ccccCCC
Confidence 234567799999999999999999999999999 6999999
Q ss_pred CCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 137 GNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 137 ~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
|.||||+|+..++.++++.|++.++...
T Consensus 289 G~TpL~~A~~~~~~~iv~~LL~~~p~~~ 316 (494)
T PHA02989 289 GDTVLTYAIKHGNIDMLNRILQLKPGKY 316 (494)
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCChH
Confidence 9999999999999999999999887643
No 40
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.82 E-value=7.2e-20 Score=126.15 Aligned_cols=145 Identities=17% Similarity=0.141 Sum_probs=120.7
Q ss_pred hccCCCCCCCCCCCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhc
Q 038957 6 EFGTDYKGSIMDQELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLL 85 (169)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~ 85 (169)
+..-++.....+.-+..+. +|||||++.|+..+++.|+.+++. ++..+....||||.|+.+|+.++++.|++..++ +
T Consensus 17 rlwld~tehdln~gddhgf-splhwaakegh~aivemll~rgar-vn~tnmgddtplhlaaahghrdivqkll~~kad-v 93 (448)
T KOG0195|consen 17 RLWLDDTEHDLNVGDDHGF-SPLHWAAKEGHVAIVEMLLSRGAR-VNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKAD-V 93 (448)
T ss_pred EEEecCcccccccccccCc-chhhhhhhcccHHHHHHHHhcccc-cccccCCCCcchhhhhhcccHHHHHHHHHHhcc-c
Confidence 3344455555566566665 689999999999999999999965 678888889999999999999999999999988 8
Q ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 86 RKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 86 ~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
+..+..|.|||||||.-|...+.+-|+..|+. ++..++.|.||+..|...-..-+.+.--++|-.++.
T Consensus 94 navnehgntplhyacfwgydqiaedli~~ga~------------v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~nr 161 (448)
T KOG0195|consen 94 NAVNEHGNTPLHYACFWGYDQIAEDLISCGAA------------VNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPNR 161 (448)
T ss_pred chhhccCCCchhhhhhhcHHHHHHHHHhccce------------eeecccCCCCchhhhchHHHHHHHHHHHHhCCCCCc
Confidence 99999999999999999999999999999999 699999999999998655444444444556666653
No 41
>PHA02795 ankyrin-like protein; Provisional
Probab=99.82 E-value=2.4e-19 Score=132.44 Aligned_cols=131 Identities=15% Similarity=0.072 Sum_probs=113.6
Q ss_pred CcccHHHHHHHH--ccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhcccc-----CCCCCC
Q 038957 22 TTMDHELLNVLR--REDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKN-----NWKGET 94 (169)
Q Consensus 22 ~~~~~~l~~a~~--~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-----~~~g~t 94 (169)
....++||.++. .|+.+++++|+.+|+.+ +. .++.||+|.|+..++.+++++|++.+....+.. +..+.|
T Consensus 114 ~~~~~~L~~~~~n~~n~~eiV~~LI~~GADI-n~--~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t 190 (437)
T PHA02795 114 NSVQDLLLYYLSNAYVEIDIVDFMVDHGAVI-YK--IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYT 190 (437)
T ss_pred ccccHHHHHHHHhcCCCHHHHHHHHHCCCCC-CC--CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccc
Confidence 445789999999 89999999999999763 33 355899999999999999999999987433322 234779
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccccc
Q 038957 95 ALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSKI 167 (169)
Q Consensus 95 pl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 167 (169)
++|.|...++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++...
T Consensus 191 ~l~~a~~~~~~eIve~LIs~GAD------------IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d 251 (437)
T PHA02795 191 RGFLVDEPTVLEIYKLCIPYIED------------INQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVM 251 (437)
T ss_pred hhHHHHhcCHHHHHHHHHhCcCC------------cCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 99999999999999999999998 69999999999999999999999999999999987654
No 42
>PHA02798 ankyrin-like protein; Provisional
Probab=99.81 E-value=3.3e-19 Score=136.19 Aligned_cols=121 Identities=16% Similarity=0.173 Sum_probs=108.2
Q ss_pred HHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHh-----CCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcC---
Q 038957 32 LRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRF-----QKHKVVQEILWRQLSLLRKNNWKGETALLIAARAG--- 103 (169)
Q Consensus 32 ~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~-----~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~--- 103 (169)
...++.++++.|++.|.. ++..+..|.||||.++.. +..+++++|++.|++ ++.+|..|.||||+|+..+
T Consensus 46 ~~~~~~~iv~~Ll~~Gad-vn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gad-iN~~d~~G~TpLh~a~~~~~~~ 123 (489)
T PHA02798 46 RDSPSTDIVKLFINLGAN-VNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGAD-INKKNSDGETPLYCLLSNGYIN 123 (489)
T ss_pred CCCCCHHHHHHHHHCCCC-CCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCC-CCCCCCCcCcHHHHHHHcCCcC
Confidence 334588999999999975 678889999999998764 568999999999999 8899999999999999875
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCc---HHHHHHHHHcCCCcccc
Q 038957 104 DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYF---IKLYKSLHARGTGVFSK 166 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~---~~~~~~Ll~~g~~~~~~ 166 (169)
+.+++++|++.|++ ++.+|..|.||||+|+..++ .+++++|+++|++++..
T Consensus 124 ~~~iv~~Ll~~Gad------------vn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~ 177 (489)
T PHA02798 124 NLEILLFMIENGAD------------TTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTH 177 (489)
T ss_pred hHHHHHHHHHcCCC------------ccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccc
Confidence 78999999999999 69999999999999999887 99999999999998643
No 43
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.81 E-value=8.9e-20 Score=120.99 Aligned_cols=123 Identities=24% Similarity=0.169 Sum_probs=77.7
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
++.+++.+-+++.+-.+.+.. ++..|+.|.|||.+|+..|+++++++|++.+++ .....+...++|.+|++.|..+
T Consensus 132 ~~slsVhql~L~~~~~~~~n~---VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAd-p~~lgk~resALsLAt~ggytd 207 (296)
T KOG0502|consen 132 PLSLSVHQLHLDVVDLLVNNK---VNACDEFGFTPLIWAAAKGHIPVVQFLLNSGAD-PDALGKYRESALSLATRGGYTD 207 (296)
T ss_pred hhhHHHHHHHHHHHHHHhhcc---ccCccccCchHhHHHHhcCchHHHHHHHHcCCC-hhhhhhhhhhhHhHHhcCChHH
Confidence 355555555555443333322 466666677777777777777777777766666 5555555666677777766677
Q ss_pred HHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 107 IVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 107 ~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
+|++|+.++.+ ++.-|-+|.|||-+|++-++.+|++.|+..|++++.
T Consensus 208 iV~lLL~r~vd------------VNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~ 254 (296)
T KOG0502|consen 208 IVELLLTREVD------------VNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQ 254 (296)
T ss_pred HHHHHHhcCCC------------cceeccCCCceeeeeecCChHHHHHHHHhcCCCccc
Confidence 77777766666 466666677777777776677777777777666653
No 44
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.81 E-value=1.4e-19 Score=120.01 Aligned_cols=129 Identities=16% Similarity=0.177 Sum_probs=113.4
Q ss_pred CCCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHH
Q 038957 17 DQELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETAL 96 (169)
Q Consensus 17 ~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl 96 (169)
+..+..+. +||.||++.|++..+++||+.+++ ++...+...++|+.|++.|-.+++++|+.+..+ ++.-|++|-|||
T Consensus 154 N~~De~Gf-TpLiWAaa~G~i~vV~fLL~~GAd-p~~lgk~resALsLAt~ggytdiV~lLL~r~vd-VNvyDwNGgTpL 230 (296)
T KOG0502|consen 154 NACDEFGF-TPLIWAAAKGHIPVVQFLLNSGAD-PDALGKYRESALSLATRGGYTDIVELLLTREVD-VNVYDWNGGTPL 230 (296)
T ss_pred cCccccCc-hHhHHHHhcCchHHHHHHHHcCCC-hhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCC-cceeccCCCcee
Confidence 33456665 589999999999999999999975 566677778999999999999999999999988 899999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCC
Q 038957 97 LIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGT 161 (169)
Q Consensus 97 ~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~ 161 (169)
.+|++.++.+|++.|+..|++ ++..+..|.+++..|+..|.. +|+..++.-+
T Consensus 231 lyAvrgnhvkcve~Ll~sGAd------------~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~ 282 (296)
T KOG0502|consen 231 LYAVRGNHVKCVESLLNSGAD------------VTQEDDSGYWIMDLAVALGYR-IVQQVIEKHA 282 (296)
T ss_pred eeeecCChHHHHHHHHhcCCC------------cccccccCCcHHHHHHHhhhH-HHHHHHHHHH
Confidence 999999999999999999999 588899999999999999987 5666555433
No 45
>PHA02917 ankyrin-like protein; Provisional
Probab=99.80 E-value=2e-18 Score=135.05 Aligned_cols=132 Identities=14% Similarity=-0.001 Sum_probs=101.9
Q ss_pred CCCcccHHHHHHHHc---cCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCC--------------------------
Q 038957 20 LPTTMDHELLNVLRR---EDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQK-------------------------- 70 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~-------------------------- 70 (169)
+..+. +|||+|+.. |+.++++.||+.+.. ++..+..|.||||.|+..|+
T Consensus 29 d~~g~-t~Lh~a~~~~~~~~~~~v~~Ll~~ga~-v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~ 106 (661)
T PHA02917 29 NQFKN-NALHAYLFNEHCNNVEVVKLLLDSGTN-PLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIF 106 (661)
T ss_pred CCCCC-cHHHHHHHhhhcCcHHHHHHHHHCCCC-ccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchH
Confidence 44444 579987555 779999999988865 46777788888887776543
Q ss_pred ---------HHHHHHHHHhcchhccccCCCCCCHHHHH--HHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCC----
Q 038957 71 ---------HKVVQEILWRQLSLLRKNNWKGETALLIA--ARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEF---- 135 (169)
Q Consensus 71 ---------~~~~~~ll~~~~~~~~~~~~~g~tpl~~a--~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~---- 135 (169)
.+++++|++.+.+ ++.+|..|.||||.+ +..|+.+++++|++.|+++ +..|.
T Consensus 107 ~~~a~~~~~~e~vk~Ll~~Gad-in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~v------------n~~d~~~~~ 173 (661)
T PHA02917 107 SYMKSKNVDVDLIKVLVEHGFD-LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSV------------LYEDEDDEY 173 (661)
T ss_pred HHHHhhcCCHHHHHHHHHcCCC-CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCc------------ccccccccc
Confidence 4566677777777 778899999999954 3578999999999999984 43332
Q ss_pred ----------CCCcHHHHHHh-----------hCcHHHHHHHHHcCCCcccc
Q 038957 136 ----------EGNTSLHNGVG-----------EYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 136 ----------~~~t~l~~A~~-----------~~~~~~~~~Ll~~g~~~~~~ 166 (169)
.+.||||+|+. .++.+++++|+++|++++..
T Consensus 174 g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~ 225 (661)
T PHA02917 174 GYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSI 225 (661)
T ss_pred ccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccC
Confidence 33699999976 46899999999999999865
No 46
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.80 E-value=3.2e-19 Score=142.86 Aligned_cols=124 Identities=21% Similarity=0.237 Sum_probs=102.5
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
+++|.+...++..+++.++..+.. .+..+..++||||.|+.+|+..+|++|++++.+ ...+++.|+||||.|+..|+.
T Consensus 509 ~~lhla~~~~~v~~~~~l~~~ga~-v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAd-v~ak~~~G~TPLH~Aa~~G~~ 586 (1143)
T KOG4177|consen 509 TPLHLAADEDTVKVAKILLEHGAN-VDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGAD-VNAKDKLGYTPLHQAAQQGHN 586 (1143)
T ss_pred chhhhhhhhhhHHHHHHHhhcCCc-eehhcccccchHHHHHhcCCchHHHHhhhCCcc-ccccCCCCCChhhHHHHcChH
Confidence 456666666666666666666643 455677788999999999999999999998888 778889999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
+|+++|+++|+. ++..|.+|.|||+.|++.|+.++++.|+..+.+.
T Consensus 587 ~i~~LLlk~GA~------------vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 587 DIAELLLKHGAS------------VNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATP 632 (1143)
T ss_pred HHHHHHHHcCCC------------CCcccccCcchhHHHHHhcccchhhHHHhccCcc
Confidence 999999999988 5888999999999999999999999998888773
No 47
>PHA02741 hypothetical protein; Provisional
Probab=99.80 E-value=2.9e-18 Score=113.71 Aligned_cols=102 Identities=20% Similarity=0.244 Sum_probs=88.8
Q ss_pred hccCCCCCCcHHHHHHHhCCHHHHHHHHHh------cchhccccCCCCCCHHHHHHHcCC----HHHHHHHHhcCCCCCC
Q 038957 51 FSTMSPRGNIVLHMAIRFQKHKVVQEILWR------QLSLLRKNNWKGETALLIAARAGD----PAIVSTLLNYVPAVKN 120 (169)
Q Consensus 51 ~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~------~~~~~~~~~~~g~tpl~~a~~~~~----~~~v~~ll~~~~~~~~ 120 (169)
++..+..|.|+||+|+..|+.+++++|+.. +.. ++.+|..|+||||+|+..|+ .+++++|++.+++
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~-in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad--- 89 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAA-LNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD--- 89 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhh-hhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC---
Confidence 345678899999999999999999998643 244 77889999999999999998 5889999999888
Q ss_pred CCCCCccccccccCC-CCCcHHHHHHhhCcHHHHHHHHH-cCCCccc
Q 038957 121 GTEAEPESLLRMTEF-EGNTSLHNGVGEYFIKLYKSLHA-RGTGVFS 165 (169)
Q Consensus 121 ~~~~~~~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~ 165 (169)
++.++. .|+||||+|+..++.+++++|++ .|++++.
T Consensus 90 ---------in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~ 127 (169)
T PHA02741 90 ---------INAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF 127 (169)
T ss_pred ---------CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc
Confidence 688885 89999999999999999999998 5888764
No 48
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.80 E-value=1.1e-18 Score=103.76 Aligned_cols=85 Identities=25% Similarity=0.284 Sum_probs=75.9
Q ss_pred HHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHH
Q 038957 28 LLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAI 107 (169)
Q Consensus 28 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~ 107 (169)
||.|+..|+.+++++|++.+.. + +. |.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~-~---~~-~~~~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGAD-I---NL-GNTALHYAAENGNLEIVKLLLENGAD-INSQDKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTST-T---TS-SSBHHHHHHHTTTHHHHHHHHHTTTC-TT-BSTTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCC-C---CC-CCCHHHHHHHcCCHHHHHHHHHhccc-ccccCCCCCCHHHHHHHcCCHHH
Confidence 7999999999999999997643 2 22 88999999999999999999999988 78889999999999999999999
Q ss_pred HHHHHhcCCCC
Q 038957 108 VSTLLNYVPAV 118 (169)
Q Consensus 108 v~~ll~~~~~~ 118 (169)
+++|++.|+++
T Consensus 75 ~~~Ll~~g~~~ 85 (89)
T PF12796_consen 75 VKLLLEHGADV 85 (89)
T ss_dssp HHHHHHTTT-T
T ss_pred HHHHHHcCCCC
Confidence 99999998884
No 49
>PHA02917 ankyrin-like protein; Provisional
Probab=99.79 E-value=1.9e-18 Score=135.23 Aligned_cols=125 Identities=15% Similarity=0.049 Sum_probs=105.4
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHH--HhCCHHHHHHHHHhcchhccccCC---CC-------
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAI--RFQKHKVVQEILWRQLSLLRKNNW---KG------- 92 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~--~~~~~~~~~~ll~~~~~~~~~~~~---~g------- 92 (169)
+.+++.|+..++.+++++|++.|.. ++..+..|.||||.++ ..|+.+++++|++.+++ ++.+|. .|
T Consensus 104 ~~~~~~a~~~~~~e~vk~Ll~~Gad-in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~-vn~~d~~~~~g~~~~~~~ 181 (661)
T PHA02917 104 NIFSYMKSKNVDVDLIKVLVEHGFD-LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCS-VLYEDEDDEYGYAYDDYQ 181 (661)
T ss_pred chHHHHHhhcCCHHHHHHHHHcCCC-CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCC-cccccccccccccccccc
Confidence 3567888999999999999999865 6788899999999654 47899999999999988 543432 33
Q ss_pred ----CCHHHHHHH-----------cCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcH--HHHHH
Q 038957 93 ----ETALLIAAR-----------AGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFI--KLYKS 155 (169)
Q Consensus 93 ----~tpl~~a~~-----------~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~--~~~~~ 155 (169)
.||||+|+. .++.+++++|++.|++ ++.+|..|.||||+|+.+|+. +++++
T Consensus 182 ~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gad------------vn~~d~~G~TpLh~A~~~g~~~~eivk~ 249 (661)
T PHA02917 182 PRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIK------------PSSIDKNYCTALQYYIKSSHIDIDIVKL 249 (661)
T ss_pred ccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCC------------cccCCCCCCcHHHHHHHcCCCcHHHHHH
Confidence 599999986 4689999999999999 699999999999999999985 79999
Q ss_pred HHHcCCCcc
Q 038957 156 LHARGTGVF 164 (169)
Q Consensus 156 Ll~~g~~~~ 164 (169)
|++ |++++
T Consensus 250 Li~-g~d~~ 257 (661)
T PHA02917 250 LMK-GIDNT 257 (661)
T ss_pred HHh-CCccc
Confidence 975 87764
No 50
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.79 E-value=8.4e-19 Score=140.54 Aligned_cols=132 Identities=20% Similarity=0.167 Sum_probs=113.0
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
...+. ++||.|+..|+.+.+..+++..+. .+.....+.+++|.+...+...+++.++..+.. .+.++..|.||||.|
T Consensus 471 s~~G~-T~Lhlaaq~Gh~~~~~llle~~~~-~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~-v~~~~~r~~TpLh~A 547 (1143)
T KOG4177|consen 471 SKQGF-TPLHLAAQEGHTEVVQLLLEGGAN-DNLDAKKGLTPLHLAADEDTVKVAKILLEHGAN-VDLRTGRGYTPLHVA 547 (1143)
T ss_pred ccccC-cchhhhhccCCchHHHHhhhcCCc-cCccchhccchhhhhhhhhhHHHHHHHhhcCCc-eehhcccccchHHHH
Confidence 44454 468888888888888877777632 445566788888888888888888888888887 788899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 100 ARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+.+|+.++|++|++++++ ++.+++.|+||||.|+..|+.+|+++|+++|++++..
T Consensus 548 ~~~g~v~~VkfLLe~gAd------------v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~ 602 (1143)
T KOG4177|consen 548 VHYGNVDLVKFLLEHGAD------------VNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAA 602 (1143)
T ss_pred HhcCCchHHHHhhhCCcc------------ccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcc
Confidence 999999999999999999 6999999999999999999999999999999998753
No 51
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.78 E-value=6.2e-19 Score=124.59 Aligned_cols=130 Identities=16% Similarity=0.165 Sum_probs=108.5
Q ss_pred CCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhC-----CHHHHHHHHHhcchhcccc-CCCC
Q 038957 19 ELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQ-----KHKVVQEILWRQLSLLRKN-NWKG 92 (169)
Q Consensus 19 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~-----~~~~~~~ll~~~~~~~~~~-~~~g 92 (169)
.+..+ +++||+++-++++++|+.||+.+.+.++..++-|+||+++++... +.++|..|...+. ++++ ...|
T Consensus 264 aDsNG-NTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgn--VNaKAsQ~g 340 (452)
T KOG0514|consen 264 ADSNG-NTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGD--VNAKASQHG 340 (452)
T ss_pred hcCCC-CeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccC--cchhhhhhc
Confidence 35555 458999999999999999999998888999999999999887543 3567777777544 3433 5579
Q ss_pred CCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHH-cCCCc
Q 038957 93 ETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHA-RGTGV 163 (169)
Q Consensus 93 ~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~ 163 (169)
+|+|.+|+..|+.++|+.|+..+++ ++.+|.+|-|+|++|+.+||.+|+++||. .++|+
T Consensus 341 QTALMLAVSHGr~d~vk~LLacgAd------------VNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~ 400 (452)
T KOG0514|consen 341 QTALMLAVSHGRVDMVKALLACGAD------------VNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDI 400 (452)
T ss_pred chhhhhhhhcCcHHHHHHHHHccCC------------CccccCCccHHHhhhhhhChHHHHHHHhccCcccc
Confidence 9999999999999999999999999 69999999999999999999999999987 34443
No 52
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.77 E-value=2.6e-19 Score=123.45 Aligned_cols=125 Identities=23% Similarity=0.228 Sum_probs=107.9
Q ss_pred HHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHH
Q 038957 29 LNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIV 108 (169)
Q Consensus 29 ~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v 108 (169)
+.-++.|+.-.++.-|+.....++.-|..|.+|||+|+..|+..+++.|+..++. ++..+....||||+|+..|+.++|
T Consensus 5 f~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgar-vn~tnmgddtplhlaaahghrdiv 83 (448)
T KOG0195|consen 5 FGWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR-VNSTNMGDDTPLHLAAAHGHRDIV 83 (448)
T ss_pred hhhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccc-cccccCCCCcchhhhhhcccHHHH
Confidence 3335666655555555554455677788899999999999999999999999998 788888888999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 109 STLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 109 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
..|+++.++ ++..+.+|.|||||||.-|...+++-|+..|+.++..
T Consensus 84 qkll~~kad------------vnavnehgntplhyacfwgydqiaedli~~ga~v~ic 129 (448)
T KOG0195|consen 84 QKLLSRKAD------------VNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNIC 129 (448)
T ss_pred HHHHHHhcc------------cchhhccCCCchhhhhhhcHHHHHHHHHhccceeeec
Confidence 999999888 6999999999999999999999999999999988643
No 53
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.77 E-value=1.8e-18 Score=127.34 Aligned_cols=90 Identities=22% Similarity=0.176 Sum_probs=83.3
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
.+..|+..|+.+-++.|+..+.. ++..+.+|.|+||.||.-.+.+|+++|++++++ ++..|..+|||||.|+..|+..
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~-~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~-Vn~~d~e~wtPlhaaascg~~~ 120 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGAS-PNLCNVDGLTALHQACIDDNLEMVKFLVENGAN-VNAQDNEGWTPLHAAASCGYLN 120 (527)
T ss_pred HHHhccccccHHHHHHHhccCCC-ccccCCccchhHHHHHhcccHHHHHHHHHhcCC-ccccccccCCcchhhcccccHH
Confidence 47888999999999999998865 578889999999999999999999999999999 8899999999999999999999
Q ss_pred HHHHHHhcCCCC
Q 038957 107 IVSTLLNYVPAV 118 (169)
Q Consensus 107 ~v~~ll~~~~~~ 118 (169)
++++|+..|+..
T Consensus 121 i~~~li~~gA~~ 132 (527)
T KOG0505|consen 121 IVEYLIQHGANL 132 (527)
T ss_pred HHHHHHHhhhhh
Confidence 999999998887
No 54
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.76 E-value=4.1e-18 Score=109.24 Aligned_cols=98 Identities=24% Similarity=0.173 Sum_probs=92.9
Q ss_pred cHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCc
Q 038957 60 IVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNT 139 (169)
Q Consensus 60 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t 139 (169)
..+.+|+..+....|+.|++..++.++.+|.+|.||||-|+..|+.+|++.|+.++++ .+.+...|||
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn------------~~a~T~~GWT 132 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN------------KEAKTNEGWT 132 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCC------------cccccccCcc
Confidence 4578899999999999999999988999999999999999999999999999999999 4889999999
Q ss_pred HHHHHHhhCcHHHHHHHHHcCCCccccccC
Q 038957 140 SLHNGVGEYFIKLYKSLHARGTGVFSKIKG 169 (169)
Q Consensus 140 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 169 (169)
|||.||+-++.+++.+|+++|+|++...+|
T Consensus 133 PLhSAckWnN~~va~~LLqhgaDVnA~t~g 162 (228)
T KOG0512|consen 133 PLHSACKWNNFEVAGRLLQHGADVNAQTKG 162 (228)
T ss_pred chhhhhcccchhHHHHHHhccCcccccccc
Confidence 999999999999999999999999998887
No 55
>PHA02730 ankyrin-like protein; Provisional
Probab=99.76 E-value=1.2e-17 Score=129.01 Aligned_cols=128 Identities=13% Similarity=0.073 Sum_probs=99.5
Q ss_pred cHHHHHHHHccC----HHHHHHHHHHhhh-hhccCCCCCCcHHHH---HHHhC---------CHHHHHHHHHhcchhccc
Q 038957 25 DHELLNVLRRED----EHQIRLLAVRMQN-IFSTMSPRGNIVLHM---AIRFQ---------KHKVVQEILWRQLSLLRK 87 (169)
Q Consensus 25 ~~~l~~a~~~g~----~~~~~~ll~~~~~-~~~~~~~~g~~~l~~---a~~~~---------~~~~~~~ll~~~~~~~~~ 87 (169)
.+|||.|+..++ .++++.|++.+.. .++..+..|.||||. +...+ ..+++++|+..+++ ++.
T Consensus 379 ~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GAD-INa 457 (672)
T PHA02730 379 NYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDD-IDM 457 (672)
T ss_pred CcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccc-hhc
Confidence 468898887774 7888988888752 356677788898874 22222 23568888888888 788
Q ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCC-CCCcHHHHHHhh--CcHHHHHHHHHcCCCcc
Q 038957 88 NNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEF-EGNTSLHNGVGE--YFIKLYKSLHARGTGVF 164 (169)
Q Consensus 88 ~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~t~l~~A~~~--~~~~~~~~Ll~~g~~~~ 164 (169)
+|..|.||||+|+..++.+++++|++.|++ ++.++. .|.||+|.|+.. ++.+++++|+++|+++.
T Consensus 458 kD~~G~TPLh~Aa~~~~~eive~LI~~GAd------------IN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~ 525 (672)
T PHA02730 458 IDNENKTLLYYAVDVNNIQFARRLLEYGAS------------VNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLE 525 (672)
T ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHCCCC------------CCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHH
Confidence 888899999999998889999999988888 588886 588999988874 67889999999888764
Q ss_pred c
Q 038957 165 S 165 (169)
Q Consensus 165 ~ 165 (169)
.
T Consensus 526 ~ 526 (672)
T PHA02730 526 T 526 (672)
T ss_pred H
Confidence 3
No 56
>PHA02730 ankyrin-like protein; Provisional
Probab=99.74 E-value=5.7e-17 Score=125.30 Aligned_cols=128 Identities=17% Similarity=0.122 Sum_probs=106.9
Q ss_pred HHHHHHHHcc---CHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCC----HHHHHHHHHhcch-hccccCCCCCCHHH
Q 038957 26 HELLNVLRRE---DEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQK----HKVVQEILWRQLS-LLRKNNWKGETALL 97 (169)
Q Consensus 26 ~~l~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~----~~~~~~ll~~~~~-~~~~~~~~g~tpl~ 97 (169)
..|+.-...+ ++++++.|++.|+. ++. +..|.||||+|+..+. .+++++|+++++. .++.+|..|.||||
T Consensus 345 ~~l~~Y~~~~~~v~ieIvelLIs~GAd-IN~-k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh 422 (672)
T PHA02730 345 AMLINYLHYGDMVSIPILRCMLDNGAT-MDK-TTDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMY 422 (672)
T ss_pred HHHHHHHhcCCcCcHHHHHHHHHCCCC-CCc-CCCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHh
Confidence 3577777766 58999999999976 444 3689999999998875 8999999999873 26788999999998
Q ss_pred H---HHHcC---------CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 98 I---AARAG---------DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 98 ~---a~~~~---------~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
. +...+ ..+++++|+..|++ ++.+|..|.||||+|+..++.+++++|+++|++++.
T Consensus 423 ~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GAD------------INakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~ 490 (672)
T PHA02730 423 GLILSRFNNCGYHCYETILIDVFDILSKYMDD------------IDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNT 490 (672)
T ss_pred HHHHHHhccccccccchhHHHHHHHHHhcccc------------hhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCC
Confidence 4 33222 23579999999999 699999999999999999999999999999999987
Q ss_pred cc
Q 038957 166 KI 167 (169)
Q Consensus 166 ~~ 167 (169)
..
T Consensus 491 ~d 492 (672)
T PHA02730 491 TS 492 (672)
T ss_pred CC
Confidence 65
No 57
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.73 E-value=1.5e-16 Score=99.79 Aligned_cols=118 Identities=21% Similarity=0.264 Sum_probs=106.7
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
++||.|+..++.+.+++|+..+.. ....+..|.+++|.|+..+..+++++|+..+.. ++..+..+.||+|+|+..++.
T Consensus 9 t~l~~a~~~~~~~~i~~li~~~~~-~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~~~~~l~~a~~~~~~ 86 (126)
T cd00204 9 TPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD-VNARDKDGNTPLHLAARNGNL 86 (126)
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCcH
Confidence 589999999999999999998854 356788899999999999999999999998876 667788999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHH
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLH 157 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll 157 (169)
+++++|++.+.. .+..+..+.||++.|...++.+++++|+
T Consensus 87 ~~~~~L~~~~~~------------~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 87 DVVKLLLKHGAD------------VNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHHHHHHcCCC------------CcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 999999998866 5778899999999999999999999874
No 58
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.72 E-value=1.2e-16 Score=113.90 Aligned_cols=102 Identities=16% Similarity=0.109 Sum_probs=88.7
Q ss_pred ccCCCCCCc-HHHHHHHhCCHHHHHHHHHhcchhcccc----CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCc
Q 038957 52 STMSPRGNI-VLHMAIRFQKHKVVQEILWRQLSLLRKN----NWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEP 126 (169)
Q Consensus 52 ~~~~~~g~~-~l~~a~~~~~~~~~~~ll~~~~~~~~~~----~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~ 126 (169)
...|..+.+ +||.|+..++.+++++|++.|++ ++.+ +..|.||||+|+..++.+++++|++.|++
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAd-iN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GAD--------- 95 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGAD-PEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGAD--------- 95 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCC-ccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 446666665 56777788999999999999998 6665 46899999999999999999999999999
Q ss_pred ccccccc-CCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 127 ESLLRMT-EFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 127 ~~~~~~~-~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
++.. +..|.||||.|+..++.+++++|+++|++++..
T Consensus 96 ---VN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~k 133 (300)
T PHA02884 96 ---VNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQ 133 (300)
T ss_pred ---cCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 5775 467999999999999999999999999998764
No 59
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.72 E-value=7.6e-17 Score=106.58 Aligned_cols=101 Identities=17% Similarity=0.089 Sum_probs=85.1
Q ss_pred cCCCCCCcHHHHHHHhCCH----HHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHH---HHHHHhcCCCCCCCCCCC
Q 038957 53 TMSPRGNIVLHMAIRFQKH----KVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAI---VSTLLNYVPAVKNGTEAE 125 (169)
Q Consensus 53 ~~~~~g~~~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~---v~~ll~~~~~~~~~~~~~ 125 (169)
..+..+.+++|.|++.|+. +++++|...+.. ++.+|..|+||||+|+..|+.+. +++|++.|++
T Consensus 15 ~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~-~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad-------- 85 (166)
T PHA02743 15 EIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHL-LHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD-------- 85 (166)
T ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchh-hhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC--------
Confidence 3556677899999999997 555566666666 67789999999999999988654 7999999988
Q ss_pred ccccccccC-CCCCcHHHHHHhhCcHHHHHHHHH-cCCCcccc
Q 038957 126 PESLLRMTE-FEGNTSLHNGVGEYFIKLYKSLHA-RGTGVFSK 166 (169)
Q Consensus 126 ~~~~~~~~~-~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~ 166 (169)
++.++ ..|.||||+|+..++.+++++|+. .|++++..
T Consensus 86 ----in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~ 124 (166)
T PHA02743 86 ----INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAI 124 (166)
T ss_pred ----CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCc
Confidence 68888 589999999999999999999995 89988654
No 60
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.71 E-value=7.5e-17 Score=93.03 Aligned_cols=103 Identities=15% Similarity=0.152 Sum_probs=88.8
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
.+.|++++|.++.++..+..+-... ....|++|||+|+-+|+.+++.+|+..+++ ++.+|+.|-|||..|+..|+.+
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn--~~~ggR~plhyAAD~GQl~ilefli~iGA~-i~~kDKygITPLLsAvwEGH~~ 81 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVN--EIYGGRTPLHYAADYGQLSILEFLISIGAN-IQDKDKYGITPLLSAVWEGHRD 81 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHH--HHhCCcccchHhhhcchHHHHHHHHHhccc-cCCccccCCcHHHHHHHHhhHH
Confidence 4789999999999999998873322 234799999999999999999999999999 8899999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHH
Q 038957 107 IVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNG 144 (169)
Q Consensus 107 ~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A 144 (169)
||++|++.|++. ..+..+|.+.+..+
T Consensus 82 cVklLL~~GAdr------------t~~~PdG~~~~eat 107 (117)
T KOG4214|consen 82 CVKLLLQNGADR------------TIHAPDGTALIEAT 107 (117)
T ss_pred HHHHHHHcCccc------------ceeCCCchhHHhhc
Confidence 999999999993 66666776666543
No 61
>PHA02792 ankyrin-like protein; Provisional
Probab=99.71 E-value=2.4e-16 Score=120.84 Aligned_cols=126 Identities=11% Similarity=0.117 Sum_probs=107.6
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCC--CCcHHHHHHHhCCH---HHHHHHHHhcchhccccCCCCCCHHHHHH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPR--GNIVLHMAIRFQKH---KVVQEILWRQLSLLRKNNWKGETALLIAA 100 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~--g~~~l~~a~~~~~~---~~~~~ll~~~~~~~~~~~~~g~tpl~~a~ 100 (169)
..++.|+..|+.+.+++|++.|+. ++..|.. +.||||+|+..... +++++++..+++ ++.+|..|.||||+|+
T Consensus 341 n~~~~Aa~~gn~eIVelLIs~GAD-IN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GAD-IN~kD~~G~TPLh~Aa 418 (631)
T PHA02792 341 NKYFQKFDNRDPKVVEYILKNGNV-VVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDD-INKIDKHGRSILYYCI 418 (631)
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCc-hhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCc-cccccccCcchHHHHH
Confidence 458899999999999999999976 5566665 46999987776654 467888998988 8889999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHh----------hCcHHHHHHHHHcCCCccc
Q 038957 101 RAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVG----------EYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 101 ~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~----------~~~~~~~~~Ll~~g~~~~~ 165 (169)
..++.+++++|++.|++ ++.++..|.||+|.|+. ....++++.|+++|+++..
T Consensus 419 ~~~n~eivelLLs~GAD------------IN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~~ 481 (631)
T PHA02792 419 ESHSVSLVEWLIDNGAD------------INITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIEC 481 (631)
T ss_pred HcCCHHHHHHHHHCCCC------------CCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChhH
Confidence 99999999999999998 69999999999999975 2236789999999988753
No 62
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.69 E-value=5.8e-17 Score=123.72 Aligned_cols=139 Identities=18% Similarity=0.128 Sum_probs=84.0
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
.||.|+.+|+..+++.|++..+. ++..+..|.+|||+|+..|+.+++++++..... .+..+-.|.||||.|+..|+.+
T Consensus 52 alhha~Lng~~~is~llle~ea~-ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~-~na~~~e~~tplhlaaqhgh~d 129 (854)
T KOG0507|consen 52 LLHHAVLNGQNQISKLLLDYEAL-LDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDI-LNAVNIENETPLHLAAQHGHLE 129 (854)
T ss_pred HHHHHHhcCchHHHHHHhcchhh-hhhhhccCcceEEehhhcCcchHHHHHHhcccC-CCcccccCcCccchhhhhcchH
Confidence 46666666666665555554432 344445555555555555555555555554432 4455555555555555555555
Q ss_pred HHHHHHhcCCCCCCCCCCCc-----------------------------cccccccCCCCCcHHHHHHhhCcHHHHHHHH
Q 038957 107 IVSTLLNYVPAVKNGTEAEP-----------------------------ESLLRMTEFEGNTSLHNGVGEYFIKLYKSLH 157 (169)
Q Consensus 107 ~v~~ll~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll 157 (169)
++.+|+.+++++-.+++... ..-...++..+-+|+|.|+++|+.++++.|+
T Consensus 130 vv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll 209 (854)
T KOG0507|consen 130 VVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALL 209 (854)
T ss_pred HHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHH
Confidence 55555555555522221111 1112344567889999999999999999999
Q ss_pred HcCCCccccc
Q 038957 158 ARGTGVFSKI 167 (169)
Q Consensus 158 ~~g~~~~~~~ 167 (169)
++|.+++...
T Consensus 210 ~ag~din~~t 219 (854)
T KOG0507|consen 210 EAGFDINYTT 219 (854)
T ss_pred hcCCCccccc
Confidence 9999998754
No 63
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.69 E-value=5.6e-17 Score=123.81 Aligned_cols=128 Identities=22% Similarity=0.234 Sum_probs=114.1
Q ss_pred ccHHHHHHHHccCHHHHHHHHHHhh------------hhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCC
Q 038957 24 MDHELLNVLRREDEHQIRLLAVRMQ------------NIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWK 91 (169)
Q Consensus 24 ~~~~l~~a~~~g~~~~~~~ll~~~~------------~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 91 (169)
+.+.+..|++.|+++.+..+|+... ...+..|.+|.|.||+|+..|+.++++.|++...- +..++..
T Consensus 3 k~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~-ldl~d~k 81 (854)
T KOG0507|consen 3 KKQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEAL-LDLCDTK 81 (854)
T ss_pred hhhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhh-hhhhhcc
Confidence 4567899999999999999997532 22456788999999999999999999999998776 6778899
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 92 GETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 92 g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
|.+|||+|++.|+.+++++++..+.. ++..+..|.||||.|+.+++.+++.+|+++|++..
T Consensus 82 g~~plhlaaw~g~~e~vkmll~q~d~------------~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~ 142 (854)
T KOG0507|consen 82 GILPLHLAAWNGNLEIVKMLLLQTDI------------LNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPF 142 (854)
T ss_pred CcceEEehhhcCcchHHHHHHhcccC------------CCcccccCcCccchhhhhcchHHHHHHHhcCCCcc
Confidence 99999999999999999999998866 68999999999999999999999999999999864
No 64
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.69 E-value=1.3e-16 Score=104.25 Aligned_cols=104 Identities=19% Similarity=0.135 Sum_probs=81.1
Q ss_pred hccCCCCCCcHHHHHHHhCCHHHHHHHHHh----cchhccccCCCCCCHHHHHHHcCCHH---HHHHHHhcCCCCCCCCC
Q 038957 51 FSTMSPRGNIVLHMAIRFQKHKVVQEILWR----QLSLLRKNNWKGETALLIAARAGDPA---IVSTLLNYVPAVKNGTE 123 (169)
Q Consensus 51 ~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~----~~~~~~~~~~~g~tpl~~a~~~~~~~---~v~~ll~~~~~~~~~~~ 123 (169)
.+..|..|.||||+|+..|+.+.+..+... ....+..+|..|.||||+|+..++.+ ++++|++.|++
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad------ 83 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD------ 83 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCC------
Confidence 355688899999999999984322111111 11224456889999999999999874 68899999988
Q ss_pred CCccccccccC-CCCCcHHHHHHhhCcHHHHHHHHH-cCCCcccc
Q 038957 124 AEPESLLRMTE-FEGNTSLHNGVGEYFIKLYKSLHA-RGTGVFSK 166 (169)
Q Consensus 124 ~~~~~~~~~~~-~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~ 166 (169)
++.++ ..|+||||+|+..++.+++++|++ .|++++..
T Consensus 84 ------in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~ 122 (154)
T PHA02736 84 ------INGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEIL 122 (154)
T ss_pred ------ccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccc
Confidence 68887 589999999999999999999998 58888643
No 65
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.68 E-value=8.1e-16 Score=105.81 Aligned_cols=123 Identities=24% Similarity=0.232 Sum_probs=114.1
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCC-----HHHHHHHHHhcc--hhccccCCCCCCHHH
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQK-----HKVVQEILWRQL--SLLRKNNWKGETALL 97 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~-----~~~~~~ll~~~~--~~~~~~~~~g~tpl~ 97 (169)
..+++.++..++...+.+++..+... +..+..|.|+||+|+..++ .+++++|+..+. .....+|..|.||||
T Consensus 74 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~ 152 (235)
T COG0666 74 RLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLH 152 (235)
T ss_pred cCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhH
Confidence 45799999999999999999998774 8899999999999999999 999999999999 557778999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcC
Q 038957 98 IAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARG 160 (169)
Q Consensus 98 ~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 160 (169)
+|+..|+.++++++++.++. ++..+..|.|++++|+..++.++++.+++.+
T Consensus 153 ~A~~~~~~~~~~~ll~~~~~------------~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 153 WAALNGDADIVELLLEAGAD------------PNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred HHHHcCchHHHHHHHhcCCC------------CcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999998 5888999999999999999999999999965
No 66
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.67 E-value=1.1e-15 Score=123.07 Aligned_cols=117 Identities=19% Similarity=0.146 Sum_probs=93.6
Q ss_pred CCCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHH------------------------
Q 038957 17 DQELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHK------------------------ 72 (169)
Q Consensus 17 ~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~------------------------ 72 (169)
+..+..+. +|||.|+..|+.++++.|++.+.. ++..|..|+||||.|+..|+.+
T Consensus 552 n~~d~~G~-TpLh~Aa~~g~~~~v~~Ll~~gad-in~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~A 629 (823)
T PLN03192 552 DIGDSKGR-TPLHIAASKGYEDCVLVLLKHACN-VHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTA 629 (823)
T ss_pred CCCCCCCC-CHHHHHHHcChHHHHHHHHhcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHH
Confidence 33444554 589999999999999999998754 6778888999988666655554
Q ss_pred -------HHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCC-CcHHHHH
Q 038957 73 -------VVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEG-NTSLHNG 144 (169)
Q Consensus 73 -------~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~-~t~l~~A 144 (169)
++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.|++ ++..|..| .||...+
T Consensus 630 a~~g~~~~v~~Ll~~Gad-in~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAd------------v~~~~~~g~~t~~~l~ 696 (823)
T PLN03192 630 AKRNDLTAMKELLKQGLN-VDSEDHQGATALQVAMAEDHVDMVRLLIMNGAD------------VDKANTDDDFSPTELR 696 (823)
T ss_pred HHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCC------------CCCCCCCCCCCHHHHH
Confidence 45556666666 788899999999999999999999999999998 58888777 8998877
Q ss_pred HhhC
Q 038957 145 VGEY 148 (169)
Q Consensus 145 ~~~~ 148 (169)
....
T Consensus 697 ~~~~ 700 (823)
T PLN03192 697 ELLQ 700 (823)
T ss_pred HHHH
Confidence 5543
No 67
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.67 E-value=7.4e-16 Score=123.13 Aligned_cols=137 Identities=17% Similarity=0.084 Sum_probs=99.6
Q ss_pred CcccHHHHHHHHccCHHHHHHHHHHhh-hhhccCCCCCCcHHH-HHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 22 TTMDHELLNVLRREDEHQIRLLAVRMQ-NIFSTMSPRGNIVLH-MAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~~g~~~l~-~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
......++.|++.|+.+.++.+++..+ ..++..|..|.|||| .|+.+++.++++.|+..+. .+..|.||||.|
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A 89 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAI 89 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHH
Confidence 344568999999999999999998722 235678889999999 8888889999999998765 577899999999
Q ss_pred HHcCCHHH----HHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 100 ARAGDPAI----VSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 100 ~~~~~~~~----v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+. +..+. +..+...+... +...............|.||||+|+.+|+.+++++|+++|++++..
T Consensus 90 ~~-~~~~~v~~ll~~l~~~~~~~--~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~ 157 (743)
T TIGR00870 90 SL-EYVDAVEAILLHLLAAFRKS--GPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPAR 157 (743)
T ss_pred Hh-ccHHHHHHHHHHHhhccccc--CchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcC
Confidence 87 33333 33333332220 0000000001123457999999999999999999999999998754
No 68
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.65 E-value=3.6e-16 Score=124.92 Aligned_cols=129 Identities=16% Similarity=0.107 Sum_probs=103.4
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccC--------------CCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTM--------------SPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNW 90 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~--------------~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 90 (169)
.+|||.|+..|+.++++.|++.++.+. .. ...|.+|||.|+..++.+++++|++.+++ ++.+|.
T Consensus 129 ~TpLhlAa~~~~~eiVklLL~~GAdv~-~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad-in~~d~ 206 (743)
T TIGR00870 129 ITALHLAAHRQNYEIVKLLLERGASVP-ARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD-ILTADS 206 (743)
T ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCCC-cCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc-hhhHhh
Confidence 468999999999999999999986532 21 13588999999999999999999999887 788999
Q ss_pred CCCCHHHHHHHcC---------CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcC
Q 038957 91 KGETALLIAARAG---------DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARG 160 (169)
Q Consensus 91 ~g~tpl~~a~~~~---------~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 160 (169)
.|+||||+|+..+ ...+.+++++.++.. +.........|..|.||||.|+..|+.+++++|++.+
T Consensus 207 ~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~-----~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~ 280 (743)
T TIGR00870 207 LGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKL-----RDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK 280 (743)
T ss_pred hhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-----CChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHH
Confidence 9999999999886 234666777665552 0000112556899999999999999999999999954
No 69
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.65 E-value=3.1e-15 Score=106.12 Aligned_cols=128 Identities=21% Similarity=0.229 Sum_probs=106.3
Q ss_pred CCCCCCcccHHHHHHHH-----ccCHHHHHHHHHHhhhhhccC-CCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCC
Q 038957 17 DQELPTTMDHELLNVLR-----REDEHQIRLLAVRMQNIFSTM-SPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNW 90 (169)
Q Consensus 17 ~~~~~~~~~~~l~~a~~-----~g~~~~~~~ll~~~~~~~~~~-~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 90 (169)
+....-+.+ |++.++. ..+.++|..|+.-+. +|.+ ...|+|+|++|+.+|+.++++.|+..+++ ++.+|.
T Consensus 296 D~qNrAGYt-piMLaALA~lk~~~d~~vV~~LF~mgn--VNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAd-VNiQDd 371 (452)
T KOG0514|consen 296 DQQNRAGYT-PVMLAALAKLKQPADRTVVERLFKMGD--VNAKASQHGQTALMLAVSHGRVDMVKALLACGAD-VNIQDD 371 (452)
T ss_pred ccccccccc-HHHHHHHHhhcchhhHHHHHHHHhccC--cchhhhhhcchhhhhhhhcCcHHHHHHHHHccCC-CccccC
Confidence 333455555 4554443 257788999988873 3433 44599999999999999999999999999 899999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHc
Q 038957 91 KGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHAR 159 (169)
Q Consensus 91 ~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 159 (169)
+|.|+|..|+..|+.+++++|+...... +..+|.+|-|+|..|...|+.+|.-+|-.+
T Consensus 372 DGSTALMCA~EHGhkEivklLLA~p~cd-----------~sLtD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 372 DGSTALMCAAEHGHKEIVKLLLAVPSCD-----------ISLTDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred CccHHHhhhhhhChHHHHHHHhccCccc-----------ceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 9999999999999999999999887663 889999999999999999999998777543
No 70
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.64 E-value=7.7e-15 Score=91.91 Aligned_cols=99 Identities=26% Similarity=0.305 Sum_probs=89.9
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCcccccccc
Q 038957 54 MSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMT 133 (169)
Q Consensus 54 ~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 133 (169)
.+..|.|+||+|+..++.+++++|+..+.. ....+..|.||+|+|+..++.+++++|++.+.. ++..
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~-~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~------------~~~~ 69 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD------------VNAR 69 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------------cccc
Confidence 457799999999999999999999998887 577889999999999999999999999999876 5777
Q ss_pred CCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 134 EFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 134 ~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
+..+.||+|+|+..++.+++++|++++.+++.
T Consensus 70 ~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~ 101 (126)
T cd00204 70 DKDGNTPLHLAARNGNLDVVKLLLKHGADVNA 101 (126)
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc
Confidence 88999999999999999999999999866654
No 71
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.64 E-value=5.7e-15 Score=101.94 Aligned_cols=121 Identities=17% Similarity=0.129 Sum_probs=110.0
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++|..++..++.+.+..||+.- .-.+..|.+|.++|.+|+..|+.++++.|++.++++..-++..+.|||+.|+.+|+
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~v-r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn 91 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTV-RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN 91 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHh-hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence 36899999999999999999874 33689999999999999999999999999999999666677788999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHH
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHA 158 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~ 158 (169)
.++.++|++.|+. ....|.-|+|+-..|+.-|+.++|..+-.
T Consensus 92 ~dvcrllldaGa~------------~~~vNsvgrTAaqmAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 92 QDVCRLLLDAGAR------------MYLVNSVGRTAAQMAAFVGHHECVAIINN 133 (396)
T ss_pred chHHHHHHhccCc------------cccccchhhhHHHHHHHhcchHHHHHHhc
Confidence 9999999999999 58889999999999999999999987654
No 72
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.64 E-value=1.4e-15 Score=87.78 Aligned_cols=90 Identities=20% Similarity=0.169 Sum_probs=79.5
Q ss_pred HHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcH
Q 038957 61 VLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTS 140 (169)
Q Consensus 61 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 140 (169)
-+.+++.+|..+-|+..+..+-+ ++.. ..|++|||+|+.+|..+++++|+..|++ ++.+|+.|-||
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~n-Vn~~-~ggR~plhyAAD~GQl~ilefli~iGA~------------i~~kDKygITP 70 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLN-VNEI-YGGRTPLHYAADYGQLSILEFLISIGAN------------IQDKDKYGITP 70 (117)
T ss_pred hHhhhhccCcHHHHHHHHHcccc-HHHH-hCCcccchHhhhcchHHHHHHHHHhccc------------cCCccccCCcH
Confidence 35678889999989888887755 3322 3789999999999999999999999999 79999999999
Q ss_pred HHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 141 LHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 141 l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
|-.|++.||.++|++|++.|++-+
T Consensus 71 LLsAvwEGH~~cVklLL~~GAdrt 94 (117)
T KOG4214|consen 71 LLSAVWEGHRDCVKLLLQNGADRT 94 (117)
T ss_pred HHHHHHHhhHHHHHHHHHcCcccc
Confidence 999999999999999999999854
No 73
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.61 E-value=3.3e-15 Score=80.36 Aligned_cols=54 Identities=33% Similarity=0.378 Sum_probs=45.3
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHH
Q 038957 92 GETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLH 157 (169)
Q Consensus 92 g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll 157 (169)
|.||||+|++.|+.+++++|++.+.+ ++.+|.+|+||||+|+.+|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~d------------in~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGAD------------INAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSG------------TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCC------------CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 68999999999999999999999877 6889999999999999999999999986
No 74
>PHA02792 ankyrin-like protein; Provisional
Probab=99.60 E-value=2.8e-14 Score=109.62 Aligned_cols=125 Identities=12% Similarity=0.057 Sum_probs=103.8
Q ss_pred HHHHHHHHcc--CHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCC--CCHHHHHHH
Q 038957 26 HELLNVLRRE--DEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKG--ETALLIAAR 101 (169)
Q Consensus 26 ~~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g--~tpl~~a~~ 101 (169)
..||.-...+ ++++++.|++.|.... .......++.|+..++.+++++|++.|++ ++.+|..| .||||+|+.
T Consensus 308 ~~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~GAD-IN~kD~~g~~~TpLh~A~~ 383 (631)
T PHA02792 308 DLLSEYVSYHTVYINVIKCMIDEGATLY---RFKHINKYFQKFDNRDPKVVEYILKNGNV-VVEDDDNIINIMPLFPTLS 383 (631)
T ss_pred HHHHHHHhcCCccHHHHHHHHHCCCccc---cCCcchHHHHHHHcCCHHHHHHHHHcCCc-hhhhcCCCCChhHHHHHHH
Confidence 3466666666 7788999999986532 22356679999999999999999999998 67788775 599999877
Q ss_pred cCCHH---HHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 102 AGDPA---IVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 102 ~~~~~---~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
....+ ++++++++|++ ++.+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 384 n~~~~v~~IlklLIs~GAD------------IN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~k 439 (631)
T PHA02792 384 IHESDVLSILKLCKPYIDD------------INKIDKHGRSILYYCIESHSVSLVEWLIDNGADINIT 439 (631)
T ss_pred hccHhHHHHHHHHHhcCCc------------cccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 66544 57888999998 6999999999999999999999999999999998754
No 75
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.58 E-value=9.5e-15 Score=78.53 Aligned_cols=54 Identities=31% Similarity=0.385 Sum_probs=43.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 038957 58 GNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLL 112 (169)
Q Consensus 58 g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll 112 (169)
|.|+||+|+..|+.+++++|++.+.+ ++.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~d-in~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGAD-INAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSG-TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 67899999999999999999998888 7778999999999999999999999885
No 76
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.58 E-value=1.3e-14 Score=107.28 Aligned_cols=119 Identities=18% Similarity=0.107 Sum_probs=98.5
Q ss_pred HHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHH
Q 038957 28 LLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAI 107 (169)
Q Consensus 28 l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~ 107 (169)
|..|+..|-++.|+.++..-. .....+..|.|+||-|+..||.++|+||+..+.+ ++..|.+||||||.|+.-++..+
T Consensus 554 LLDaaLeGEldlVq~~i~ev~-DpSqpNdEGITaLHNAiCaghyeIVkFLi~~gan-VNa~DSdGWTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVT-DPSQPNDEGITALHNAICAGHYEIVKFLIEFGAN-VNAADSDGWTPLHCAASCNNVPM 631 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhc-CCCCCCccchhHHhhhhhcchhHHHHHHHhcCCc-ccCccCCCCchhhhhhhcCchHH
Confidence 667888899999888887653 2566778899999999999999999999998888 88899999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHH--HhhCcHHHHHHHHHc
Q 038957 108 VSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNG--VGEYFIKLYKSLHAR 159 (169)
Q Consensus 108 v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A--~~~~~~~~~~~Ll~~ 159 (169)
++.|++.|+.+ +-.+=.++.|+...+ ...|..+|.++|-.-
T Consensus 632 ckqLVe~Gaav-----------fAsTlSDmeTa~eKCee~eeGY~~CsqyL~~v 674 (752)
T KOG0515|consen 632 CKQLVESGAAV-----------FASTLSDMETAAEKCEEMEEGYDQCSQYLYGV 674 (752)
T ss_pred HHHHHhccceE-----------EeeecccccchhhhcchhhhhHHHHHHHHHHH
Confidence 99999998885 566667788888877 445778888888653
No 77
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.57 E-value=2.5e-14 Score=112.68 Aligned_cols=86 Identities=19% Similarity=0.184 Sum_probs=78.0
Q ss_pred HHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcH
Q 038957 61 VLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTS 140 (169)
Q Consensus 61 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 140 (169)
.|+.|+..|+.+.++.|+..+.+ ++.+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gad-in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad------------vn~~d~~G~Tp 151 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGAD-PNCRDYDGRTPLHIACANGHVQVVRVLLEFGAD------------PTLLDKDGKTP 151 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC------------CCCCCCCCCCH
Confidence 47888999999999999998888 788899999999999999999999999999888 58889999999
Q ss_pred HHHHHhhCcHHHHHHHHHc
Q 038957 141 LHNGVGEYFIKLYKSLHAR 159 (169)
Q Consensus 141 l~~A~~~~~~~~~~~Ll~~ 159 (169)
||+|+..++.+++++|+++
T Consensus 152 Lh~A~~~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 152 LELAEENGFREVVQLLSRH 170 (664)
T ss_pred HHHHHHCCcHHHHHHHHhC
Confidence 9999999999999999988
No 78
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.56 E-value=3.1e-14 Score=112.13 Aligned_cols=87 Identities=22% Similarity=0.146 Sum_probs=81.5
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
..|+.|+..|+.+.++.|+..+.. ++..|..|.||||+|+..|+.+++++|+..+++ ++.+|..|.||||+|+..|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gad-in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-vn~~d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGAD-PNCRDYDGRTPLHIACANGHVQVVRVLLEFGAD-PTLLDKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCcH
Confidence 358899999999999999998865 678899999999999999999999999999988 788999999999999999999
Q ss_pred HHHHHHHhc
Q 038957 106 AIVSTLLNY 114 (169)
Q Consensus 106 ~~v~~ll~~ 114 (169)
+++++|+.+
T Consensus 162 ~iv~~Ll~~ 170 (664)
T PTZ00322 162 EVVQLLSRH 170 (664)
T ss_pred HHHHHHHhC
Confidence 999999998
No 79
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.56 E-value=5.5e-15 Score=79.94 Aligned_cols=55 Identities=27% Similarity=0.282 Sum_probs=24.8
Q ss_pred HHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHH
Q 038957 78 LWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNG 144 (169)
Q Consensus 78 l~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A 144 (169)
++.++..++.+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|+||+|+|
T Consensus 2 L~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d------------~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 2 LEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGAD------------PNAKDKDGQTPLHYA 56 (56)
T ss_dssp ----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--------------TT---TTS--HHHH-
T ss_pred CccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCC------------CCCCcCCCCCHHHhC
Confidence 3444222566677777777777777777777777766666 577777777777765
No 80
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.55 E-value=5.3e-14 Score=108.57 Aligned_cols=124 Identities=15% Similarity=0.123 Sum_probs=110.0
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhc--------cCC--------------CCCCcHHHHHHHhCCHHHHHHHHHhcc
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFS--------TMS--------------PRGNIVLHMAIRFQKHKVVQEILWRQL 82 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~--------~~~--------------~~g~~~l~~a~~~~~~~~~~~ll~~~~ 82 (169)
.++||.|+.+.+.+.|+.|+..++++.. ..| ..|..||..|+..++.+++++|+++++
T Consensus 185 qSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gA 264 (782)
T KOG3676|consen 185 QSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGA 264 (782)
T ss_pred cchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCC
Confidence 6799999999999999999998874321 111 236689999999999999999999999
Q ss_pred hhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHc
Q 038957 83 SLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHAR 159 (169)
Q Consensus 83 ~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 159 (169)
+ ++++|..|+|.||..+..-..+|.+++++.++.. +...+|..|-|||-+|++.|..+|.+.+++.
T Consensus 265 d-~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~----------l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 265 D-PNAQDSNGNTVLHMLVIHFVTEMYDLALELGANA----------LEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred C-CCccccCCChHHHHHHHHHHHHHHHHHHhcCCCc----------cccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 9 8999999999999999998999999999998883 3478899999999999999999999999998
No 81
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.53 E-value=1.5e-14 Score=78.24 Aligned_cols=56 Identities=25% Similarity=0.252 Sum_probs=33.0
Q ss_pred HHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 43 LAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 43 ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
||+.++..++..|..|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||+|+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d-~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGAD-PNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT---TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCC-CCCCcCCCCCHHHhC
Confidence 45666555788999999999999999999999999988888 899999999999987
No 82
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.51 E-value=3.1e-13 Score=104.45 Aligned_cols=125 Identities=23% Similarity=0.259 Sum_probs=107.2
Q ss_pred cHHHHHHHHc---cCHHHHHHHHHHhhhhhcc----CCCCCCcHHHHHHHhCCHHHHHHHHHhcchhcccc---------
Q 038957 25 DHELLNVLRR---EDEHQIRLLAVRMQNIFST----MSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKN--------- 88 (169)
Q Consensus 25 ~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~----~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~--------- 88 (169)
.+.||.|..+ ++.++++.|++-.|.+++. ....|.|+||+|+.+.+.++|.+|+..+++ ++.+
T Consensus 144 ET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gAD-V~aRa~G~FF~~~ 222 (782)
T KOG3676|consen 144 ETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGAD-VHARACGAFFCPD 222 (782)
T ss_pred hhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCc-hhhHhhccccCcc
Confidence 5689998773 5668999999998877663 244599999999999999999999998765 2111
Q ss_pred --------------CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHH
Q 038957 89 --------------NWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYK 154 (169)
Q Consensus 89 --------------~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~ 154 (169)
-..|..||.+|+-.++++|+++|++.+++ ++.+|..|+|.||..+.+-..+|-.
T Consensus 223 dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd------------~~aqDS~GNTVLH~lVi~~~~~My~ 290 (782)
T KOG3676|consen 223 DQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGAD------------PNAQDSNGNTVLHMLVIHFVTEMYD 290 (782)
T ss_pred cccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCC------------CCccccCCChHHHHHHHHHHHHHHH
Confidence 11478999999999999999999999999 6999999999999999998899999
Q ss_pred HHHHcCCC
Q 038957 155 SLHARGTG 162 (169)
Q Consensus 155 ~Ll~~g~~ 162 (169)
+++++|++
T Consensus 291 ~~L~~ga~ 298 (782)
T KOG3676|consen 291 LALELGAN 298 (782)
T ss_pred HHHhcCCC
Confidence 99999998
No 83
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=8.4e-14 Score=103.16 Aligned_cols=91 Identities=27% Similarity=0.290 Sum_probs=83.0
Q ss_pred HHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHH
Q 038957 62 LHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSL 141 (169)
Q Consensus 62 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l 141 (169)
|.=|+..|..++|+.++..-.+ ....|..|-|+||-|+-.|+.+||++|+++|++ ++..|.+|||||
T Consensus 554 LLDaaLeGEldlVq~~i~ev~D-pSqpNdEGITaLHNAiCaghyeIVkFLi~~gan------------VNa~DSdGWTPL 620 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTD-PSQPNDEGITALHNAICAGHYEIVKFLIEFGAN------------VNAADSDGWTPL 620 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcC-CCCCCccchhHHhhhhhcchhHHHHHHHhcCCc------------ccCccCCCCchh
Confidence 4457888999999999887766 677889999999999999999999999999999 699999999999
Q ss_pred HHHHhhCcHHHHHHHHHcCCCccc
Q 038957 142 HNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 142 ~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
|+|+..++..+++.|++.|+.+..
T Consensus 621 HCAASCNnv~~ckqLVe~GaavfA 644 (752)
T KOG0515|consen 621 HCAASCNNVPMCKQLVESGAAVFA 644 (752)
T ss_pred hhhhhcCchHHHHHHHhccceEEe
Confidence 999999999999999999998754
No 84
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.48 E-value=1.9e-12 Score=89.03 Aligned_cols=102 Identities=24% Similarity=0.250 Sum_probs=92.7
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC-----HHHHHHHHhcCC--CCCCCCCCC
Q 038957 53 TMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD-----PAIVSTLLNYVP--AVKNGTEAE 125 (169)
Q Consensus 53 ~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~-----~~~v~~ll~~~~--~~~~~~~~~ 125 (169)
..+..+.++++.++..+..+++.+++..+.+ +..++..|.||+|+|+..++ .++++.|++.++ ..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~------- 139 (235)
T COG0666 68 ARDLDGRLPLHSAASKGDDKIVKLLLASGAD-VNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDV------- 139 (235)
T ss_pred cCCccccCHHHHHHHcCcHHHHHHHHHcCCC-cccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCC-------
Confidence 4455578999999999999999999999998 59999999999999999999 999999999999 43
Q ss_pred ccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 126 PESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 126 ~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
...+|..|.||||+|+..|+.+++++|++.|+++...
T Consensus 140 ----~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~ 176 (235)
T COG0666 140 ----NNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSR 176 (235)
T ss_pred ----ccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCccc
Confidence 6777999999999999999999999999999987653
No 85
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.47 E-value=4.8e-14 Score=112.17 Aligned_cols=132 Identities=20% Similarity=0.246 Sum_probs=102.9
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
......++|-.||+.|+.+.++.|+.++.. +.+.|+.|.+||.+|+..|+..+|+.|+.....+-...|+.+.|+|.+|
T Consensus 753 Te~n~~t~LT~acaggh~e~vellv~rgan-iehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSla 831 (2131)
T KOG4369|consen 753 TEPNIKTNLTSACAGGHREEVELLVVRGAN-IEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLA 831 (2131)
T ss_pred cCccccccccccccCccHHHHHHHHHhccc-ccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEe
Confidence 344556779999999999999999999865 6788999999999999999999999999988886666788899999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 100 ARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
|..|+.++|++|+..|+.. ..++....|||.+|..-|..++++.|+.+|++++
T Consensus 832 csggr~~vvelLl~~gank------------ehrnvsDytPlsla~Sggy~~iI~~llS~GseIn 884 (2131)
T KOG4369|consen 832 CSGGRTRVVELLLNAGANK------------EHRNVSDYTPLSLARSGGYTKIIHALLSSGSEIN 884 (2131)
T ss_pred cCCCcchHHHHHHHhhccc------------cccchhhcCchhhhcCcchHHHHHHHhhcccccc
Confidence 9999999999999998884 4444445555555555555555555555555544
No 86
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.34 E-value=1.6e-12 Score=103.86 Aligned_cols=134 Identities=16% Similarity=0.090 Sum_probs=117.7
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
+++++ .||..|+..|++.+|..|+.....+--..|+.+.|+|.+||..|+.+++..|+..+.+ -.-++....|||.+|
T Consensus 787 dkkgf-~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gan-kehrnvsDytPlsla 864 (2131)
T KOG4369|consen 787 DKKGF-VPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGAN-KEHRNVSDYTPLSLA 864 (2131)
T ss_pred ccccc-hhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhcc-ccccchhhcCchhhh
Confidence 45565 5799999999999999999998876678899999999999999999999999999887 566788889999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCcccccccc--CCCCCcHHHHHHhhCcHHHHHHHHHcCCCccccc
Q 038957 100 ARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMT--EFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSKI 167 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~--~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 167 (169)
..-|..++++.|+..|+++ +.+ .+.|-.||..|..+|+...++.|++.|.|+|..|
T Consensus 865 ~Sggy~~iI~~llS~GseI------------nSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqI 922 (2131)
T KOG4369|consen 865 RSGGYTKIIHALLSSGSEI------------NSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQI 922 (2131)
T ss_pred cCcchHHHHHHHhhccccc------------ccccccccCcchhhhhhhccccHHHHHHhcccchhcccc
Confidence 9999999999999999884 443 5678889999999999999999999998888765
No 87
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.34 E-value=2.9e-12 Score=95.02 Aligned_cols=126 Identities=18% Similarity=0.183 Sum_probs=110.8
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcch----------------
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLS---------------- 83 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~---------------- 83 (169)
...++ ++||.++-..+.++++++++.+.. ++..|..++||||.|+..|+..+++++++.+.+
T Consensus 70 n~Dgl-Talhq~~id~~~e~v~~l~e~ga~-Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e 147 (527)
T KOG0505|consen 70 NVDGL-TALHQACIDDNLEMVKFLVENGAN-VNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAE 147 (527)
T ss_pred CCccc-hhHHHHHhcccHHHHHHHHHhcCC-ccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCcccccc
Confidence 34554 589999999999999999999965 788899999999999999999999999987421
Q ss_pred ------------------------------------------hccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 038957 84 ------------------------------------------LLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNG 121 (169)
Q Consensus 84 ------------------------------------------~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~ 121 (169)
.....+..|-|.||.|+..|..++.++|+..+..
T Consensus 148 ~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~---- 223 (527)
T KOG0505|consen 148 DEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYS---- 223 (527)
T ss_pred CcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccC----
Confidence 1245566699999999999999999999999999
Q ss_pred CCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHc
Q 038957 122 TEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHAR 159 (169)
Q Consensus 122 ~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 159 (169)
++.+|.+||||||.|+.-|+.+++++|+++
T Consensus 224 --------~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ 253 (527)
T KOG0505|consen 224 --------VNIKDYDGWTPLHAAAHWGQEDACELLVEH 253 (527)
T ss_pred --------cccccccCCCcccHHHHhhhHhHHHHHHHh
Confidence 599999999999999999999999999874
No 88
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.16 E-value=3.3e-10 Score=78.75 Aligned_cols=94 Identities=18% Similarity=0.085 Sum_probs=82.8
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCC
Q 038957 59 NIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGN 138 (169)
Q Consensus 59 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (169)
..+|.-++..+..+-+..|++..-. ++..|.+|-+||..|+..|+.+++++|++.|+++ -..++..+.
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~-vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDv-----------N~~qhg~~Y 80 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQ-VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADV-----------NDKQHGTLY 80 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhh-hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCc-----------Ccccccccc
Confidence 4578888888888888888886555 7889999999999999999999999999999995 334577899
Q ss_pred cHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 139 TSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 139 t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
||||.|+..|+.++.++|++.|+++.
T Consensus 81 TpLmFAALSGn~dvcrllldaGa~~~ 106 (396)
T KOG1710|consen 81 TPLMFAALSGNQDVCRLLLDAGARMY 106 (396)
T ss_pred cHHHHHHHcCCchHHHHHHhccCccc
Confidence 99999999999999999999999864
No 89
>PF13606 Ank_3: Ankyrin repeat
Probab=99.16 E-value=5.6e-11 Score=55.47 Aligned_cols=30 Identities=33% Similarity=0.397 Sum_probs=28.0
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 136 EGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 136 ~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
+|+||||+|++.|+.+++++|+++|+|++.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 489999999999999999999999999873
No 90
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.12 E-value=3.9e-10 Score=84.95 Aligned_cols=121 Identities=24% Similarity=0.217 Sum_probs=105.3
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcc-hhccccCCCCCCHHHHHHHcCC
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQL-SLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
..|..|+..+|+-.+...-..+.+ +-..+.+..+.||+|+..|+-++++|++++++ .++++.+..|.|+||-|+-.++
T Consensus 868 eeil~av~~~D~~klqE~h~~gg~-ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMKLQETHLNGGS-LLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHHHhccHHHHHHHHhcCCc-eEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence 347888888888776666656544 44667888999999999999999999999987 4577889999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHAR 159 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 159 (169)
..+..+|++.|+. +..+|..|.||-.-|-..|..+++.+|-.+
T Consensus 947 r~vc~~lvdagas------------l~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 947 RAVCQLLVDAGAS------------LRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred hHHHHHHHhcchh------------heecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 9999999999999 788999999999999999999999998764
No 91
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.08 E-value=8.6e-10 Score=81.67 Aligned_cols=97 Identities=19% Similarity=0.075 Sum_probs=82.6
Q ss_pred cCCCCCCc------HHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCc
Q 038957 53 TMSPRGNI------VLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEP 126 (169)
Q Consensus 53 ~~~~~g~~------~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~ 126 (169)
..|.+|.+ -||.+++.+..++.--|+..|++.....-..|.||||.|++.|+.-.+++|+-+|++
T Consensus 122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD--------- 192 (669)
T KOG0818|consen 122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGAD--------- 192 (669)
T ss_pred CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCC---------
Confidence 45555554 389999999999888888888884334455799999999999999999999999999
Q ss_pred cccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCC
Q 038957 127 ESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGT 161 (169)
Q Consensus 127 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~ 161 (169)
+...|.+|.||+.+|-..||.++++-|++.-.
T Consensus 193 ---~~a~d~~GmtP~~~AR~~gH~~laeRl~e~~y 224 (669)
T KOG0818|consen 193 ---PGAQDSSGMTPVDYARQGGHHELAERLVEIQY 224 (669)
T ss_pred ---CCCCCCCCCcHHHHHHhcCchHHHHHHHHHHH
Confidence 59999999999999999999999999987543
No 92
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.08 E-value=1.4e-10 Score=85.26 Aligned_cols=89 Identities=18% Similarity=0.088 Sum_probs=81.5
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
.+.+|++.||+..++.+.-.+.+ +...|.+.+|+||.|+..|+++++++|+.........+|..|+|||.-|..+++.+
T Consensus 509 ~~~~aa~~GD~~alrRf~l~g~D-~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~ 587 (622)
T KOG0506|consen 509 NVMYAAKNGDLSALRRFALQGMD-LETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKE 587 (622)
T ss_pred hhhhhhhcCCHHHHHHHHHhccc-ccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHH
Confidence 58999999999999999888754 77899999999999999999999999999887668889999999999999999999
Q ss_pred HHHHHHhcCC
Q 038957 107 IVSTLLNYVP 116 (169)
Q Consensus 107 ~v~~ll~~~~ 116 (169)
++++|.+...
T Consensus 588 v~k~L~~~~~ 597 (622)
T KOG0506|consen 588 VVKLLEEAQY 597 (622)
T ss_pred HHHHHHHHhc
Confidence 9999988644
No 93
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.05 E-value=2e-10 Score=89.63 Aligned_cols=90 Identities=24% Similarity=0.214 Sum_probs=79.1
Q ss_pred HHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccC-CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 038957 45 VRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNN-WKGETALLIAARAGDPAIVSTLLNYVPAVKNGTE 123 (169)
Q Consensus 45 ~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~ 123 (169)
.......+..|..|+++||+++..+..+++++|+++|.+ +..+| .+|+||||-|..+|+++|+-+|+.+|..
T Consensus 39 k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGid-v~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S------ 111 (1267)
T KOG0783|consen 39 KSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGID-VFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS------ 111 (1267)
T ss_pred HhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCce-eeeccccccchHhhHhhhhchHHHHHHHHhcCCc------
Confidence 334444678899999999999999999999999999988 45555 4899999999999999999999999988
Q ss_pred CCccccccccCCCCCcHHHHHHhh
Q 038957 124 AEPESLLRMTEFEGNTSLHNGVGE 147 (169)
Q Consensus 124 ~~~~~~~~~~~~~~~t~l~~A~~~ 147 (169)
+..+|.+|..||..-++-
T Consensus 112 ------L~i~Dkeglsplq~~~r~ 129 (1267)
T KOG0783|consen 112 ------LRIKDKEGLSPLQFLSRV 129 (1267)
T ss_pred ------eEEecccCCCHHHHHhhc
Confidence 799999999999988773
No 94
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.03 E-value=1.8e-09 Score=81.32 Aligned_cols=96 Identities=24% Similarity=0.318 Sum_probs=82.7
Q ss_pred CcccHHHHHHHHccCHHHHHHHHHHhhhh--h-ccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHH
Q 038957 22 TTMDHELLNVLRREDEHQIRLLAVRMQNI--F-STMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLI 98 (169)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~--~-~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~ 98 (169)
..+...|..|....|+..+-.||.++... . ...+.+|+|+||.||+.|++.+.+.|++++.+ +..+|..|+|+|.|
T Consensus 622 ~~lgqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d-v~~rda~g~t~l~y 700 (749)
T KOG0705|consen 622 EPLGQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD-VMARDAHGRTALFY 700 (749)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc-ceecccCCchhhhh
Confidence 34456688999999999999999876421 1 24456689999999999999999999999998 88899999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCC
Q 038957 99 AARAGDPAIVSTLLNYVPAV 118 (169)
Q Consensus 99 a~~~~~~~~v~~ll~~~~~~ 118 (169)
|.+.|..+|+++|+.+|.-.
T Consensus 701 ar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 701 ARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred HhhcccHHHHHHHHHcCCCc
Confidence 99999999999999998775
No 95
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.00 E-value=7.4e-10 Score=53.02 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=29.7
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHHcCCCccccc
Q 038957 136 EGNTSLHNGVGEYFIKLYKSLHARGTGVFSKI 167 (169)
Q Consensus 136 ~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 167 (169)
+|.||||+|+..++.+++++|+++|++++...
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 48999999999999999999999999998764
No 96
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.96 E-value=1e-09 Score=80.89 Aligned_cols=93 Identities=19% Similarity=0.169 Sum_probs=83.3
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCC
Q 038957 57 RGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFE 136 (169)
Q Consensus 57 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 136 (169)
++...+.+|+..|.+..++-+.-.+.+ +..+|.+.+|+||.|+..|+.+++++|++..... .+.+|.+
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~g~D-~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~-----------~~~kDRw 572 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQGMD-LETKDYDDRTALHVAAAEGHVEVVKFLLNACKVD-----------PDPKDRW 572 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHhccc-ccccccccchhheeecccCceeHHHHHHHHHcCC-----------CChhhcc
Confidence 355678999999999999888777888 8889999999999999999999999999987664 7889999
Q ss_pred CCcHHHHHHhhCcHHHHHHHHHcCC
Q 038957 137 GNTSLHNGVGEYFIKLYKSLHARGT 161 (169)
Q Consensus 137 ~~t~l~~A~~~~~~~~~~~Ll~~g~ 161 (169)
|+|||.-|...++.+++++|-+..-
T Consensus 573 ~rtPlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 573 GRTPLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred CCCcchHhHhcCcHHHHHHHHHHhc
Confidence 9999999999999999999987643
No 97
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.91 E-value=5.6e-09 Score=77.94 Aligned_cols=88 Identities=18% Similarity=0.249 Sum_probs=66.0
Q ss_pred HHHHHHHHccCHHHHHHHHHHh-hhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 26 HELLNVLRREDEHQIRLLAVRM-QNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++|++....+.+.+...+... ...++..|..|.||||+|+..|+.+.+..|+..+++ +..+|+.|++|||-|+.+|+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad-v~~kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD-VSIKNNEGWSPLHEAVSTGN 100 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC-ccccccccccHHHHHHHcCC
Confidence 4588888888777776654432 233566777788888888888888888888888877 67788888888888888888
Q ss_pred HHHHHHHHhc
Q 038957 105 PAIVSTLLNY 114 (169)
Q Consensus 105 ~~~v~~ll~~ 114 (169)
..++..++..
T Consensus 101 ~q~i~~vlr~ 110 (560)
T KOG0522|consen 101 EQIITEVLRH 110 (560)
T ss_pred HHHHHHHHHH
Confidence 8877777664
No 98
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.89 E-value=9.6e-09 Score=76.27 Aligned_cols=92 Identities=14% Similarity=0.129 Sum_probs=79.5
Q ss_pred CCcccHHHHHHHHccCHHHHHHHHHHhhhhhccC-CCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 21 PTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTM-SPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 21 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
.+.+...||..++.|+.+..-.||..|+. .+.. .+.|.||||.|+..|+.-.+++|+-+|++ +...|.+|.||+.+|
T Consensus 130 ~~~LsrQLhasvRt~nlet~LRll~lGA~-~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD-~~a~d~~GmtP~~~A 207 (669)
T KOG0818|consen 130 AKDLSKQLHSSVRTGNLETCLRLLSLGAQ-ANFFHPEKGNTPLHVAAKAGQILQAELLAVYGAD-PGAQDSSGMTPVDYA 207 (669)
T ss_pred HHHHHHHHHHHhhcccHHHHHHHHHcccc-cCCCCcccCCchhHHHHhccchhhhhHHhhccCC-CCCCCCCCCcHHHHH
Confidence 34455679999999999999999999876 4433 45699999999999999999999999999 889999999999999
Q ss_pred HHcCCHHHHHHHHhc
Q 038957 100 ARAGDPAIVSTLLNY 114 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~ 114 (169)
...|+.++.+-|++.
T Consensus 208 R~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 208 RQGGHHELAERLVEI 222 (669)
T ss_pred HhcCchHHHHHHHHH
Confidence 999998887766665
No 99
>PF13606 Ank_3: Ankyrin repeat
Probab=98.87 E-value=4.4e-09 Score=49.00 Aligned_cols=28 Identities=39% Similarity=0.464 Sum_probs=24.0
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCC
Q 038957 91 KGETALLIAARAGDPAIVSTLLNYVPAV 118 (169)
Q Consensus 91 ~g~tpl~~a~~~~~~~~v~~ll~~~~~~ 118 (169)
+|+||||+|++.|+.+++++|++.|+++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 4789999999999999999999988773
No 100
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.81 E-value=2.5e-08 Score=75.30 Aligned_cols=90 Identities=20% Similarity=0.122 Sum_probs=74.7
Q ss_pred HHHHHHhCCHHHHHHHHHhcchh---ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCC
Q 038957 62 LHMAIRFQKHKVVQEILWRQLSL---LRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGN 138 (169)
Q Consensus 62 l~~a~~~~~~~~~~~ll~~~~~~---~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (169)
|..|.....+..+-.|+.++... -..-+.+|+|+||+|++.|+..+..+|+=++.+ +..+|..|+
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d------------v~~rda~g~ 695 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD------------VMARDAHGR 695 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc------------ceecccCCc
Confidence 45566666777788888876531 122345679999999999999999999999888 699999999
Q ss_pred cHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 139 TSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 139 t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
|||+||-..|..+++.+|+++|+--
T Consensus 696 t~l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 696 TALFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred hhhhhHhhcccHHHHHHHHHcCCCc
Confidence 9999999999999999999998753
No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.80 E-value=2.2e-08 Score=74.90 Aligned_cols=66 Identities=20% Similarity=0.237 Sum_probs=56.0
Q ss_pred CCCCCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcc
Q 038957 15 IMDQELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQL 82 (169)
Q Consensus 15 ~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~ 82 (169)
..+..+..+ .+|||.|+..|+.++++.|+..++. ....+..|+++||.|+..|+.+++..++.+..
T Consensus 47 ~id~~D~~g-~TpLhlAV~Lg~~~~a~~Ll~a~Ad-v~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~~ 112 (560)
T KOG0522|consen 47 VIDRRDPPG-RTPLHLAVRLGHVEAARILLSAGAD-VSIKNNEGWSPLHEAVSTGNEQIITEVLRHLK 112 (560)
T ss_pred eeccccCCC-CccHHHHHHhcCHHHHHHHHhcCCC-ccccccccccHHHHHHHcCCHHHHHHHHHHhH
Confidence 344556677 6789999999999999999999865 56789999999999999999999888887654
No 102
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.79 E-value=1.3e-08 Score=48.64 Aligned_cols=28 Identities=39% Similarity=0.534 Sum_probs=25.5
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCC
Q 038957 91 KGETALLIAARAGDPAIVSTLLNYVPAV 118 (169)
Q Consensus 91 ~g~tpl~~a~~~~~~~~v~~ll~~~~~~ 118 (169)
+|.||||+|+..|+.+++++|++.|+++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~ 28 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADI 28 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 4789999999999999999999998884
No 103
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.77 E-value=2.7e-08 Score=75.28 Aligned_cols=89 Identities=22% Similarity=0.246 Sum_probs=81.5
Q ss_pred HHHHHHHHccCHHHHHHHHHHhh-hhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQ-NIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
+.||+|+..|+-++++++|+++| ++++..++.|.|+||.|+..++..+.++|++.++. +...|..|.||-.-|.+.|+
T Consensus 901 sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagas-l~ktd~kg~tp~eraqqa~d 979 (1004)
T KOG0782|consen 901 SLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGAS-LRKTDSKGKTPQERAQQAGD 979 (1004)
T ss_pred hHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchh-heecccCCCChHHHHHhcCC
Confidence 57999999999999999999986 55678889999999999999999999999999999 67789999999999999999
Q ss_pred HHHHHHHHhcC
Q 038957 105 PAIVSTLLNYV 115 (169)
Q Consensus 105 ~~~v~~ll~~~ 115 (169)
.+...+|-.+.
T Consensus 980 ~dlaayle~rq 990 (1004)
T KOG0782|consen 980 PDLAAYLESRQ 990 (1004)
T ss_pred chHHHHHhhhh
Confidence 99999987653
No 104
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.75 E-value=7e-08 Score=75.89 Aligned_cols=129 Identities=17% Similarity=0.092 Sum_probs=100.3
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhh---hhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHc
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQN---IFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARA 102 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~---~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~ 102 (169)
.....|++.|+...++..+..... .+++.|.-|.++|++|..+.+.++.++|+++... . ..+|.+|+..
T Consensus 27 ~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~-~-------gdALL~aI~~ 98 (822)
T KOG3609|consen 27 KGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSE-E-------GDALLLAIAV 98 (822)
T ss_pred HHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccc-c-------chHHHHHHHH
Confidence 347889999999999999976542 3567888899999999999999999999997654 2 2488899999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 103 GDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 103 ~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
|..++|+.++........ .......-...=..+-||+.+|+..+++||++.|+.+|+++-
T Consensus 99 ~~v~~VE~ll~~~~~~~~--~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 99 GSVPLVELLLVHFVDAPY--LERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHHHHHHHhcccccch--hccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 999999999987555200 000011112223468899999999999999999999999863
No 105
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.72 E-value=7.7e-09 Score=81.13 Aligned_cols=81 Identities=21% Similarity=0.087 Sum_probs=70.4
Q ss_pred HHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCC-CCCcHHHHHHhhCcHHHH
Q 038957 75 QEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEF-EGNTSLHNGVGEYFIKLY 153 (169)
Q Consensus 75 ~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~t~l~~A~~~~~~~~~ 153 (169)
-++-..+.+..+++|..|+|+||+++..+..+++++|++.|.+ +..+|. .|+||||-|..+|+.+++
T Consensus 35 ~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGid------------v~vqD~ESG~taLHRaiyyG~idca 102 (1267)
T KOG0783|consen 35 GFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGID------------VFVQDEESGYTALHRAIYYGNIDCA 102 (1267)
T ss_pred HHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCce------------eeeccccccchHhhHhhhhchHHHH
Confidence 3444556667889999999999999999999999999999888 677774 799999999999999999
Q ss_pred HHHHHcCCCccccc
Q 038957 154 KSLHARGTGVFSKI 167 (169)
Q Consensus 154 ~~Ll~~g~~~~~~~ 167 (169)
-+|+++|..+..+.
T Consensus 103 ~lLL~~g~SL~i~D 116 (1267)
T KOG0783|consen 103 SLLLSKGRSLRIKD 116 (1267)
T ss_pred HHHHhcCCceEEec
Confidence 99999998765544
No 106
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.45 E-value=2.4e-07 Score=74.35 Aligned_cols=132 Identities=13% Similarity=-0.035 Sum_probs=98.1
Q ss_pred CCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHH-HhcchhccccCCCCCCHHH
Q 038957 19 ELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEIL-WRQLSLLRKNNWKGETALL 97 (169)
Q Consensus 19 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll-~~~~~~~~~~~~~g~tpl~ 97 (169)
...+++. .+|.++..+..-.++.+++-........|.+|...+|.|+. ++.++.-+++ ..+.. ++++|..|+||||
T Consensus 570 ~~~r~~l-llhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~-lg~ewA~ll~~~~~~a-i~i~D~~G~tpL~ 646 (975)
T KOG0520|consen 570 VNFRDML-LLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAA-LGYEWAFLPISADGVA-IDIRDRNGWTPLH 646 (975)
T ss_pred CCCcchH-HHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhh-cCCceeEEEEeecccc-cccccCCCCcccc
Confidence 3456654 58999999998888888875113345678888999999554 4445444443 33444 8899999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHc
Q 038957 98 IAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHAR 159 (169)
Q Consensus 98 ~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 159 (169)
+|+.+|+..++..|++.++... ...+.+.....|.|+-..|..+|+..+..+|-+.
T Consensus 647 wAa~~G~e~l~a~l~~lga~~~------~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 647 WAAFRGREKLVASLIELGADPG------AVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred hHhhcCHHHHHHHHHHhccccc------cccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 9999999999999999888751 1222344456799999999999998888887664
No 107
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.39 E-value=4e-07 Score=72.90 Aligned_cols=88 Identities=20% Similarity=0.195 Sum_probs=80.0
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCC
Q 038957 57 RGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFE 136 (169)
Q Consensus 57 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 136 (169)
.|.++||.|+..+...+..+|++.+.+ ++..|..|++|+|.+...|+...+..++.+++. .+..+.+
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~------------~~a~~~~ 721 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRGAD------------PNAFDPD 721 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhcccccc------------ccccCcc
Confidence 468999999999999999999999999 899999999999999999999999999999998 5889999
Q ss_pred CCcHHHHHHhhCcHHHHHHHH
Q 038957 137 GNTSLHNGVGEYFIKLYKSLH 157 (169)
Q Consensus 137 ~~t~l~~A~~~~~~~~~~~Ll 157 (169)
|.+|++.|....+.+++-++.
T Consensus 722 ~~~~l~~a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 722 GKLPLDIAMEAANADIVLLLR 742 (785)
T ss_pred CcchhhHHhhhccccHHHHHh
Confidence 999999997777766665554
No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.35 E-value=2.9e-06 Score=61.58 Aligned_cols=73 Identities=19% Similarity=0.156 Sum_probs=60.2
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
.-.|++|++.|+.+.+++|++.|.. +|..|...++||.+|+..||..++++|+++|+. -....-+|..++.-|
T Consensus 37 f~elceacR~GD~d~v~~LVetgvn-VN~vD~fD~spL~lAsLcGHe~vvklLLenGAi-C~rdtf~G~RC~Yga 109 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVN-VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI-CSRDTFDGDRCHYGA 109 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCC-cchhhcccccHHHHHHHcCcHHHHHHHHHcCCc-ccccccCcchhhhhh
Confidence 3469999999999999999998754 788999999999999999999999999999884 333444666555433
No 109
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.26 E-value=4e-06 Score=60.87 Aligned_cols=58 Identities=17% Similarity=0.103 Sum_probs=54.3
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 038957 59 NIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPA 117 (169)
Q Consensus 59 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~ 117 (169)
..-|-.||+.|..+.+++|++.+.+ ++..|....+||.+|+..||.++|++|+++|+.
T Consensus 37 f~elceacR~GD~d~v~~LVetgvn-VN~vD~fD~spL~lAsLcGHe~vvklLLenGAi 94 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVN-VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI 94 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCC-cchhhcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence 4568899999999999999999888 889999999999999999999999999999887
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.20 E-value=6.2e-06 Score=54.46 Aligned_cols=67 Identities=18% Similarity=0.160 Sum_probs=61.2
Q ss_pred hccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 038957 51 FSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPA 117 (169)
Q Consensus 51 ~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~ 117 (169)
++..|..|+|+++.|+..|+.+.+.||+..+...+...|.++.+.+.+|-+.|..+++..|.+.-.+
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 5778899999999999999999999999999555889999999999999999999999999988555
No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.12 E-value=9.4e-06 Score=53.64 Aligned_cols=65 Identities=23% Similarity=0.120 Sum_probs=60.2
Q ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcC
Q 038957 85 LRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARG 160 (169)
Q Consensus 85 ~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 160 (169)
++.+|..||||+..|+..|.-+.+.+|+.+|... +...|..+.+++.+|-+.|..++++.|.+.-
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~-----------vgv~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAF-----------VGVTDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCccc-----------ccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence 7789999999999999999999999999999553 7999999999999999999999999998863
No 112
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.07 E-value=9.4e-06 Score=65.57 Aligned_cols=99 Identities=15% Similarity=0.064 Sum_probs=73.8
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHh-cchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCcccccc
Q 038957 53 TMSPRGNIVLHMAIRFQKHKVVQEILWR-QLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLR 131 (169)
Q Consensus 53 ~~~~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 131 (169)
.....|++.+|.++..+..-+++.+++. +.. ....|.+|.-.+|+++ .++.++.-+++...... ++
T Consensus 569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~-~~eld~d~qgV~hfca-~lg~ewA~ll~~~~~~a-----------i~ 635 (975)
T KOG0520|consen 569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSG-DLELDRDGQGVIHFCA-ALGYEWAFLPISADGVA-----------ID 635 (975)
T ss_pred cCCCcchHHHHHHHHHhHHHHHHHHhcccccC-chhhcccCCChhhHhh-hcCCceeEEEEeecccc-----------cc
Confidence 3445688999999999888888888875 332 4456667777777744 45555555554433332 78
Q ss_pred ccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 132 MTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 132 ~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
.+|..|+||||||..+|+..++..|.+.|++..
T Consensus 636 i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~ 668 (975)
T KOG0520|consen 636 IRDRNGWTPLHWAAFRGREKLVASLIELGADPG 668 (975)
T ss_pred cccCCCCcccchHhhcCHHHHHHHHHHhccccc
Confidence 999999999999999999999999999888754
No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.79 E-value=2.1e-05 Score=63.35 Aligned_cols=88 Identities=20% Similarity=0.148 Sum_probs=78.0
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++||.|+..|+.-.++.|++.+.. ++..+..|.+|+|.+...|+...+..++.++++ ....+..|.+|+.+|....+
T Consensus 657 ~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~-~~a~~~~~~~~l~~a~~~~~ 734 (785)
T KOG0521|consen 657 CSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRGAD-PNAFDPDGKLPLDIAMEAAN 734 (785)
T ss_pred cchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhcccccc-ccccCccCcchhhHHhhhcc
Confidence 4689999999999999999999976 889999999999999999999999999998888 78889999999999988877
Q ss_pred HHHHHHHHhc
Q 038957 105 PAIVSTLLNY 114 (169)
Q Consensus 105 ~~~v~~ll~~ 114 (169)
.+++-++...
T Consensus 735 ~d~~~l~~l~ 744 (785)
T KOG0521|consen 735 ADIVLLLRLA 744 (785)
T ss_pred ccHHHHHhhh
Confidence 7776555433
No 114
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.69 E-value=9e-05 Score=33.01 Aligned_cols=29 Identities=24% Similarity=0.354 Sum_probs=26.2
Q ss_pred CCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 136 EGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 136 ~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
.+.||+|+|+..++.++++.|+++|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 36899999999999999999999998764
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.30 E-value=0.00059 Score=30.13 Aligned_cols=26 Identities=35% Similarity=0.465 Sum_probs=21.8
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCC
Q 038957 92 GETALLIAARAGDPAIVSTLLNYVPA 117 (169)
Q Consensus 92 g~tpl~~a~~~~~~~~v~~ll~~~~~ 117 (169)
|.||+|+|+..++.++++.|++.+..
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 67889999888999999988887664
No 116
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=97.22 E-value=0.0086 Score=41.17 Aligned_cols=117 Identities=12% Similarity=0.064 Sum_probs=81.1
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcc----hhccccCCCCCCHHHH--HH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQL----SLLRKNNWKGETALLI--AA 100 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~----~~~~~~~~~g~tpl~~--a~ 100 (169)
.|-.|+...+.+.+..++.... .-.+++-++...+..+++.+|+.+.. ++..+.- +.--+.+ ..
T Consensus 156 sledAV~AsN~~~i~~~VtdKk--------dA~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~--~~ydieY~LS~ 225 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTDKK--------DAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEK--ELYDIEYLLSE 225 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcchH--------HHHHHHHHHhcccHHHHHHHHHhhcceecchhhhcCc--chhhHHHHHhh
Confidence 4777888888887766654432 12467888888888899999998653 2122211 1112333 33
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCccccccc---cCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 101 RAGDPAIVSTLLNYVPAVKNGTEAEPESLLRM---TEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 101 ~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~---~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
...+..++++++++|-.. ++. +-+.|.|-|.-|++++..+++.+|+++|+-..
T Consensus 226 h~a~~kvL~~Fi~~Glv~-----------vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~~ 281 (284)
T PF06128_consen 226 HSASYKVLEYFINRGLVD-----------VNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAISG 281 (284)
T ss_pred cCCcHHHHHHHHhccccc-----------cchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcccc
Confidence 456678899999887552 342 35679999999999999999999999998554
No 117
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.93 E-value=0.0028 Score=50.93 Aligned_cols=85 Identities=19% Similarity=0.108 Sum_probs=68.0
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchh---------ccccCCCCCCHH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSL---------LRKNNWKGETAL 96 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~---------~~~~~~~g~tpl 96 (169)
.+|+.|+.+.+.+..+.|++..... ..+|.+|+..|..++++.++...... ....-..+-||+
T Consensus 64 ~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPl 135 (822)
T KOG3609|consen 64 LALHIAIDNENLELQELLLDTSSEE--------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPL 135 (822)
T ss_pred hceecccccccHHHHHHHhcCcccc--------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHH
Confidence 4689999999999999999886321 34888899999999999999864321 112223467999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCC
Q 038957 97 LIAARAGDPAIVSTLLNYVPAV 118 (169)
Q Consensus 97 ~~a~~~~~~~~v~~ll~~~~~~ 118 (169)
.+|+..++.||++.|+..|+..
T Consensus 136 iLAAh~NnyEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 136 MLAAHLNNFEILQCLLTRGHCI 157 (822)
T ss_pred HHHHHhcchHHHHHHHHcCCCC
Confidence 9999999999999999999886
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.75 E-value=0.0031 Score=47.85 Aligned_cols=52 Identities=19% Similarity=0.195 Sum_probs=43.5
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHh
Q 038957 58 GNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLN 113 (169)
Q Consensus 58 g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~ 113 (169)
-.|+||+|+..|..+++.+||..+++ ...+|..|.||..++. +.++-..++.
T Consensus 430 tsT~LH~aa~qg~~k~v~~~Leeg~D-p~~kd~~Grtpy~ls~---nkdVk~~F~a 481 (591)
T KOG2505|consen 430 TSTFLHYAAAQGARKCVKYFLEEGCD-PSTKDGAGRTPYSLSA---NKDVKSIFIA 481 (591)
T ss_pred cchHHHHHHhcchHHHHHHHHHhcCC-chhcccCCCCcccccc---cHHHHHHHHH
Confidence 57899999999999999999999977 8899999999999887 4444443433
No 119
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.62 E-value=0.0032 Score=47.77 Aligned_cols=63 Identities=19% Similarity=0.082 Sum_probs=48.8
Q ss_pred HHHHHHHHHhcchh-----ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHH
Q 038957 71 HKVVQEILWRQLSL-----LRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGV 145 (169)
Q Consensus 71 ~~~~~~ll~~~~~~-----~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~ 145 (169)
...+.+|....... ....+....|+||+|+.+|..++|.+|++.+++ ..++|..|.||...+.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~D------------p~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCD------------PSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCC------------chhcccCCCCcccccc
Confidence 44566666654331 123344567999999999999999999999988 4899999999998876
No 120
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.69 E-value=0.11 Score=35.99 Aligned_cols=91 Identities=15% Similarity=0.185 Sum_probs=64.2
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCC----CCCCcHHHHHH--HhCCHHHHHHHHHhcchhcc---ccCCCCCCH
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMS----PRGNIVLHMAI--RFQKHKVVQEILWRQLSLLR---KNNWKGETA 95 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~----~~g~~~l~~a~--~~~~~~~~~~ll~~~~~~~~---~~~~~g~tp 95 (169)
-.++..++..+..+++.+|++... ....| ..+.--+.++. -..+..++++++.+|-..++ .+-++|.|-
T Consensus 180 ~~Am~~si~~~K~dva~~lls~f~--ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtM 257 (284)
T PF06128_consen 180 HQAMWLSIGNAKEDVALYLLSKFN--FTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTM 257 (284)
T ss_pred HHHHHHHhcccHHHHHHHHHhhcc--eecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchH
Confidence 356788888888889988987742 11111 11222344443 34457899999998753332 346789999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCC
Q 038957 96 LLIAARAGDPAIVSTLLNYVPA 117 (169)
Q Consensus 96 l~~a~~~~~~~~v~~ll~~~~~ 117 (169)
|.-|..+++.+++..|+++|+.
T Consensus 258 LDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 258 LDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HHhHHhcCcHHHHHHHHHcCcc
Confidence 9999999999999999999986
No 121
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=95.05 E-value=0.063 Score=30.52 Aligned_cols=47 Identities=17% Similarity=0.106 Sum_probs=39.3
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHc
Q 038957 94 TALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHAR 159 (169)
Q Consensus 94 tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 159 (169)
..+..|...|+.++++.+++.+.. ...++..|+...+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~~-------------------~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNKP-------------------DNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhcc-------------------HHHHHHHHHHHhhHHHHHHHHHh
Confidence 567899999999999999975322 15689999999999999999985
No 122
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=91.52 E-value=0.97 Score=25.58 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=34.3
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhc
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQ 81 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~ 81 (169)
..+..|+..|+.++++..++.... + ...+..|+..-+.+++++|++..
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~~-----~---~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNKP-----D---NDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhcc-----H---HHHHHHHHHHhhHHHHHHHHHhc
Confidence 347788888888888877755411 1 34688888888888888887753
No 123
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=90.92 E-value=3.5 Score=27.76 Aligned_cols=111 Identities=17% Similarity=0.066 Sum_probs=69.3
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcc-----------------------
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQL----------------------- 82 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~----------------------- 82 (169)
-.+..|+..+-+++++..-.... ..-...++.+-.||+..+.++++|+-+.-.
T Consensus 48 CLl~HAVk~nmL~ILqkyke~L~----~~~~~~q~LFElAC~~qkydiV~WI~qnL~i~~~~~iFdIA~~~kDlsLyslG 123 (192)
T PF03158_consen 48 CLLYHAVKYNMLSILQKYKEDLE----NERYLNQELFELACEEQKYDIVKWIGQNLHIYNPEDIFDIAFAKKDLSLYSLG 123 (192)
T ss_pred HHHHHHHHcCcHHHHHHHHHHhh----cchhHHHHHHHHHHHHccccHHHHHhhccCCCCchhhhhhhhhccchhHHHHH
Confidence 34666777777777665544321 111234567777888888888888755310
Q ss_pred -h-hccc-cCCCCC-------CHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHH
Q 038957 83 -S-LLRK-NNWKGE-------TALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKL 152 (169)
Q Consensus 83 -~-~~~~-~~~~g~-------tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~ 152 (169)
. +.+. .+..+. .-|..|+..|-.+.+--.+.+|... + .++|..|+.+++..+
T Consensus 124 Y~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~------------~------~~vls~Av~ynhRkI 185 (192)
T PF03158_consen 124 YKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNV------------D------IIVLSQAVKYNHRKI 185 (192)
T ss_pred HHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcc------------c------HHHHHHHHHhhHHHH
Confidence 0 0000 000111 2356788888888888888887774 2 289999999999999
Q ss_pred HHHHHH
Q 038957 153 YKSLHA 158 (169)
Q Consensus 153 ~~~Ll~ 158 (169)
..+++.
T Consensus 186 L~yfi~ 191 (192)
T PF03158_consen 186 LDYFIR 191 (192)
T ss_pred HHHhhc
Confidence 888764
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=73.38 E-value=9.9 Score=25.72 Aligned_cols=78 Identities=14% Similarity=-0.024 Sum_probs=51.5
Q ss_pred HHHHHHHccCHHHHH---HHHHHhhhhhccCCCCC----CcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 27 ELLNVLRREDEHQIR---LLAVRMQNIFSTMSPRG----NIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~---~ll~~~~~~~~~~~~~g----~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
.+-.|....|.+... .++-..-. ...+.+- ...|..|+..|-...+...+..+.+ .+ .+.|..|
T Consensus 107 iFdIA~~~kDlsLyslGY~l~~~~~~--~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~-~~------~~vls~A 177 (192)
T PF03158_consen 107 IFDIAFAKKDLSLYSLGYKLLFNRMM--SEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGN-VD------IIVLSQA 177 (192)
T ss_pred hhhhhhhccchhHHHHHHHHHHhhcc--cccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCc-cc------HHHHHHH
Confidence 456777788877542 23322211 1111111 1346889999999988888888877 32 2799999
Q ss_pred HHcCCHHHHHHHHh
Q 038957 100 ARAGDPAIVSTLLN 113 (169)
Q Consensus 100 ~~~~~~~~v~~ll~ 113 (169)
+.+++..++.+++.
T Consensus 178 v~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 178 VKYNHRKILDYFIR 191 (192)
T ss_pred HHhhHHHHHHHhhc
Confidence 99999999998864
No 125
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=43.11 E-value=32 Score=23.71 Aligned_cols=53 Identities=13% Similarity=0.177 Sum_probs=37.9
Q ss_pred CCCCCCHHHHHHHcCCHHHHH-HHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCc
Q 038957 89 NWKGETALLIAARAGDPAIVS-TLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYF 149 (169)
Q Consensus 89 ~~~g~tpl~~a~~~~~~~~v~-~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~ 149 (169)
+.....|||-++.-++.+++- ++++..+.. +-.++..|.+|..+|..|.....
T Consensus 219 d~kTe~~LHk~iki~REDVl~LYfie~daki--------P~~LNd~D~nG~~ALdiAL~~~~ 272 (280)
T KOG4591|consen 219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKI--------PGILNDADHNGALALDIALCREL 272 (280)
T ss_pred cCCCcchhHHhhhccccceeeehhhhccccc--------cccccccCCCchHHHHHHHHHHH
Confidence 445568999999999998754 445554443 22367778999999999876543
No 126
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=42.27 E-value=41 Score=18.40 Aligned_cols=24 Identities=8% Similarity=0.227 Sum_probs=19.0
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhh
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNI 50 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~ 50 (169)
++..++..||.+.+..+|......
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~y~~y 25 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKHYEPY 25 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHH
Confidence 466788999999999998886543
No 127
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=41.14 E-value=21 Score=28.08 Aligned_cols=66 Identities=6% Similarity=-0.148 Sum_probs=38.5
Q ss_pred cchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHH---HhhCcHHHHHHHH
Q 038957 81 QLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNG---VGEYFIKLYKSLH 157 (169)
Q Consensus 81 ~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A---~~~~~~~~~~~Ll 157 (169)
+..-.+.....++++|+++...++.+.+........- +-+.....++++.... ++++..+..+.++
T Consensus 166 ~k~~p~~l~gq~sp~lll~~~s~h~~~v~~d~~~~~~-----------~rn~~~~~~re~~~~~ee~a~~n~eeA~~nvl 234 (558)
T KOG4335|consen 166 PKHQPNYLLGQQSPELLLRFTSAHDDDVAMDEPFLQF-----------RRNVFFPKGRELQIIDEEVARLNYEEAKGNVL 234 (558)
T ss_pred cccCCchhhccCCchhhhhccCCchhhhhccccchHH-----------hhhhhcccCcchhhhHHHHHHHhHHHHHHhHH
Confidence 3333556677889999999988888887665544322 1334455566665433 3334444444443
No 128
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=32.17 E-value=6.4 Score=30.92 Aligned_cols=93 Identities=15% Similarity=0.083 Sum_probs=56.6
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCC-HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccC
Q 038957 56 PRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGET-ALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTE 134 (169)
Q Consensus 56 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t-pl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~ 134 (169)
.+..|++..|...|..+.+.+++..+-+.++..-.+|.. ...+-...+..+.+..|..+... .+.+|
T Consensus 56 ~~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~~C~~~g~s~~~~e~~~hL~~~k~~------------~~~td 123 (528)
T KOG1595|consen 56 LNQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDEHCAVLGRSVGDTERTYHLRYYKTL------------PCVTD 123 (528)
T ss_pred hccccccchhhhcCccccccceeecchhhccccCCCCcccchhcccccCCcceeEeccccccc------------cCccc
Confidence 345689999999999998888876544334333334444 22222334566666667766665 45567
Q ss_pred CCCCcH---HHHHHhh---CcHHHHHHHHHcC
Q 038957 135 FEGNTS---LHNGVGE---YFIKLYKSLHARG 160 (169)
Q Consensus 135 ~~~~t~---l~~A~~~---~~~~~~~~Ll~~g 160 (169)
..|..+ +|.|..+ +...+++.|++.+
T Consensus 124 a~g~~~~~v~~~~~~~~~~~~r~~~~~l~e~~ 155 (528)
T KOG1595|consen 124 ARGNCVKNVLHCAFAHGPNDLRPPVEDLLELQ 155 (528)
T ss_pred cCCCcccCcccccccCCccccccHHHHHHhcc
Confidence 666655 4555444 3456677777765
No 129
>PF08898 DUF1843: Domain of unknown function (DUF1843); InterPro: IPR014994 This domain is found in functionally uncharacterised proteins. It can be found independently or at the C terminus of the protein.
Probab=28.47 E-value=99 Score=16.25 Aligned_cols=23 Identities=17% Similarity=0.263 Sum_probs=19.4
Q ss_pred HHHHHHHHccCHHHHHHHHHHhh
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQ 48 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~ 48 (169)
-+++.|+..||+.-.+.+.....
T Consensus 5 vaiq~AiasGDLa~MK~l~~~ae 27 (53)
T PF08898_consen 5 VAIQQAIASGDLAQMKALAAQAE 27 (53)
T ss_pred HHHHHHHHcCcHHHHHHHHHHHH
Confidence 36899999999999999887654
No 130
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=22.88 E-value=3.3e+02 Score=21.45 Aligned_cols=24 Identities=13% Similarity=-0.051 Sum_probs=14.6
Q ss_pred CcHHHHHHhhCc-HHHHHHHHHcCC
Q 038957 138 NTSLHNGVGEYF-IKLYKSLHARGT 161 (169)
Q Consensus 138 ~t~l~~A~~~~~-~~~~~~Ll~~g~ 161 (169)
..+++.+...|. .+++++|.+.|-
T Consensus 406 n~af~~~~~lgd~~~cv~lL~~~~~ 430 (443)
T PF04053_consen 406 NIAFQAALLLGDVEECVDLLIETGR 430 (443)
T ss_dssp HHHHHHHHHHT-HHHHHHHHHHTT-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHcCC
Confidence 445666666665 568888887653
Done!