Query 038957
Match_columns 169
No_of_seqs 141 out of 1926
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 07:47:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 2.4E-30 8.1E-35 170.8 16.3 134 16-164 30-163 (169)
2 4gpm_A Engineered protein OR26 100.0 1.4E-29 4.6E-34 167.1 15.9 128 25-166 5-132 (169)
3 1d9s_A Cyclin-dependent kinase 100.0 9.6E-29 3.3E-33 157.5 11.5 129 18-162 7-136 (136)
4 2jab_A H10-2-G3; HER2, darpin, 100.0 7.9E-28 2.7E-32 153.3 14.9 125 22-160 12-136 (136)
5 3v30_A DNA-binding protein rfx 100.0 1.1E-27 3.8E-32 158.1 14.3 130 20-164 33-162 (172)
6 1n0r_A 4ANK, 4 ankyrin repeats 100.0 2.7E-27 9.3E-32 148.3 14.7 123 26-162 4-126 (126)
7 3twr_A Tankyrase-2; ankyrin re 100.0 1.9E-27 6.5E-32 156.0 14.2 128 25-165 9-136 (165)
8 2y1l_E Darpin-8.4; hydrolase-i 100.0 4E-27 1.4E-31 155.1 15.8 129 24-166 14-142 (169)
9 3f6q_A Integrin-linked protein 100.0 2.2E-27 7.7E-32 157.7 14.2 125 27-165 42-166 (179)
10 4b93_B Ankyrin repeat domain-c 100.0 2.7E-27 9.4E-32 166.9 15.2 134 18-166 81-214 (269)
11 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.6E-27 1.2E-31 154.1 14.7 128 20-162 35-162 (162)
12 1awc_B Protein (GA binding pro 100.0 6.1E-27 2.1E-31 151.9 15.5 127 25-166 3-129 (153)
13 3v31_A Ankyrin repeat family A 100.0 3.6E-27 1.2E-31 154.9 14.5 125 27-165 39-163 (167)
14 2rfm_A Putative ankyrin repeat 100.0 7.2E-27 2.4E-31 156.8 15.8 132 20-166 32-163 (192)
15 1bi7_B P16INK4A, MTS1, multipl 99.9 7.1E-28 2.4E-32 156.9 9.3 127 25-166 13-140 (156)
16 3v30_A DNA-binding protein rfx 99.9 9.5E-27 3.3E-31 153.6 14.1 128 26-166 4-131 (172)
17 3v31_A Ankyrin repeat family A 99.9 1.6E-26 5.5E-31 151.8 14.8 127 26-166 5-131 (167)
18 3f6q_A Integrin-linked protein 99.9 2.2E-26 7.4E-31 152.9 14.4 128 26-166 7-134 (179)
19 2y1l_E Darpin-8.4; hydrolase-i 99.9 6.1E-26 2.1E-30 149.5 16.3 126 20-160 44-169 (169)
20 2vge_A RELA-associated inhibit 99.9 7.8E-27 2.7E-31 161.0 11.3 129 25-167 22-153 (229)
21 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.3E-26 4.4E-31 151.5 11.6 125 24-163 5-129 (162)
22 1yyh_A HN1;, notch 1, ankyrin 99.9 6.3E-26 2.2E-30 158.4 15.6 138 27-165 60-218 (253)
23 3twr_A Tankyrase-2; ankyrin re 99.9 5.2E-26 1.8E-30 149.1 14.3 122 25-161 43-164 (165)
24 2f8y_A Notch homolog 1, transl 99.9 1.7E-25 6E-30 153.0 17.2 90 27-117 28-117 (223)
25 2rfm_A Putative ankyrin repeat 99.9 1.3E-25 4.4E-30 150.7 15.6 126 20-160 65-190 (192)
26 2rfa_A Transient receptor pote 99.9 8E-26 2.7E-30 155.7 14.9 142 25-166 4-150 (232)
27 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.5E-26 2.6E-30 147.0 13.8 116 27-158 39-154 (156)
28 2f8y_A Notch homolog 1, transl 99.9 2.1E-25 7.2E-30 152.6 16.7 124 27-163 61-184 (223)
29 3aji_A 26S proteasome non-ATPa 99.9 3.8E-25 1.3E-29 152.1 17.2 138 27-166 43-201 (231)
30 3hra_A Ankyrin repeat family p 99.9 3.7E-25 1.3E-29 149.2 16.5 135 19-166 35-174 (201)
31 3b7b_A Euchromatic histone-lys 99.9 3.7E-25 1.3E-29 152.7 16.5 127 27-166 80-206 (237)
32 3aji_A 26S proteasome non-ATPa 99.9 3.5E-25 1.2E-29 152.3 16.0 139 25-164 7-166 (231)
33 1ikn_D Protein (I-kappa-B-alph 99.9 2.3E-25 7.7E-30 153.9 15.1 126 26-164 80-211 (236)
34 2rfa_A Transient receptor pote 99.9 9.6E-25 3.3E-29 150.3 18.1 133 17-163 31-184 (232)
35 1yyh_A HN1;, notch 1, ankyrin 99.9 1.7E-25 6E-30 156.1 14.5 137 29-166 28-186 (253)
36 1awc_B Protein (GA binding pro 99.9 1.7E-25 5.9E-30 145.0 13.3 118 25-156 35-152 (153)
37 3d9h_A CDNA FLJ77766, highly s 99.9 3.8E-25 1.3E-29 157.1 16.2 144 20-166 56-219 (285)
38 2dzn_A Probable 26S proteasome 99.9 5.2E-25 1.8E-29 151.1 16.2 127 26-165 38-169 (228)
39 1oy3_D Transcription factor in 99.9 2.5E-25 8.4E-30 157.0 14.9 100 54-166 154-254 (282)
40 1ikn_D Protein (I-kappa-B-alph 99.9 2.1E-25 7.1E-30 154.1 13.6 133 20-166 42-180 (236)
41 3c5r_A BARD-1, BRCA1-associate 99.9 3.3E-26 1.1E-30 145.8 8.7 125 25-163 11-135 (137)
42 1oy3_D Transcription factor in 99.9 5.7E-25 1.9E-29 155.1 15.9 145 20-166 6-187 (282)
43 2dzn_A Probable 26S proteasome 99.9 3.7E-25 1.3E-29 151.8 14.4 129 25-166 73-204 (228)
44 3hra_A Ankyrin repeat family p 99.9 8.1E-25 2.8E-29 147.5 15.8 128 20-160 69-201 (201)
45 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.4E-25 1.8E-29 142.9 14.4 120 25-158 3-122 (156)
46 2xai_A ASB-9, ankyrin repeat a 99.9 1E-24 3.6E-29 152.9 16.7 124 26-164 38-161 (261)
47 1s70_B 130 kDa myosin-binding 99.9 1.2E-24 3.9E-29 155.0 17.1 139 25-165 41-260 (299)
48 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.1E-26 1.4E-30 158.2 9.3 128 25-166 38-168 (239)
49 1k1a_A B-cell lymphoma 3-encod 99.9 1.9E-24 6.5E-29 149.3 17.7 138 27-166 49-212 (241)
50 4hbd_A KN motif and ankyrin re 99.9 3E-25 1E-29 157.0 13.5 134 18-165 106-245 (276)
51 3jxi_A Vanilloid receptor-rela 99.9 7.6E-26 2.6E-30 158.3 10.0 133 25-164 94-252 (260)
52 2xai_A ASB-9, ankyrin repeat a 99.9 7.5E-25 2.6E-29 153.6 14.9 126 26-166 5-130 (261)
53 2pnn_A Transient receptor pote 99.9 2.9E-25 1E-29 156.5 12.8 127 25-164 55-220 (273)
54 2etb_A Transient receptor pote 99.9 1.9E-25 6.6E-30 156.0 11.7 126 25-164 91-248 (256)
55 2pnn_A Transient receptor pote 99.9 2.7E-25 9.1E-30 156.7 12.4 133 25-164 102-261 (273)
56 2etb_A Transient receptor pote 99.9 3.4E-25 1.2E-29 154.7 12.8 130 20-163 40-207 (256)
57 1dcq_A PYK2-associated protein 99.9 9.8E-25 3.4E-29 154.5 14.6 126 25-163 131-264 (278)
58 1sw6_A Regulatory protein SWI6 99.9 5.4E-25 1.9E-29 159.1 13.4 146 19-166 127-312 (327)
59 1k1a_A B-cell lymphoma 3-encod 99.9 5.1E-24 1.7E-28 147.2 17.4 144 20-165 6-178 (241)
60 3aaa_C Myotrophin, protein V-1 99.9 4.2E-25 1.4E-29 138.2 10.8 114 25-152 8-121 (123)
61 3b7b_A Euchromatic histone-lys 99.9 3.7E-24 1.3E-28 147.7 16.5 126 27-165 47-172 (237)
62 3lvq_E ARF-GAP with SH3 domain 99.9 8.3E-25 2.8E-29 166.1 14.2 126 26-165 134-268 (497)
63 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1E-24 3.6E-29 130.0 11.8 93 57-162 1-93 (93)
64 3utm_A Tankyrase-1; tankyrase, 99.9 3.4E-24 1.1E-28 155.3 16.7 97 19-118 54-150 (351)
65 3ehr_A Osteoclast-stimulating 99.9 1.7E-25 5.7E-30 153.4 9.3 127 25-165 74-201 (222)
66 3utm_A Tankyrase-1; tankyrase, 99.9 1.3E-24 4.6E-29 157.4 14.5 128 25-165 25-152 (351)
67 1wdy_A 2-5A-dependent ribonucl 99.9 3.3E-24 1.1E-28 151.1 15.8 129 25-166 6-134 (285)
68 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.5E-25 1.2E-29 153.5 10.3 127 25-166 6-132 (239)
69 1n11_A Ankyrin; clathrin, BAND 99.9 3.7E-24 1.3E-28 159.8 16.2 127 26-166 247-373 (437)
70 3kea_A K1L; tropism, ANK repea 99.9 1.6E-24 5.5E-29 153.8 13.1 130 17-163 25-155 (285)
71 1s70_B 130 kDa myosin-binding 99.9 5.3E-24 1.8E-28 151.6 15.8 112 54-166 36-228 (299)
72 1n11_A Ankyrin; clathrin, BAND 99.9 4.8E-24 1.6E-28 159.2 15.6 137 27-165 17-174 (437)
73 1wdy_A 2-5A-dependent ribonucl 99.9 5E-24 1.7E-28 150.2 14.8 129 25-166 149-282 (285)
74 3ljn_A Hypothetical protein; a 99.9 1.2E-24 4.1E-29 159.1 11.9 126 25-163 139-270 (364)
75 4b93_B Ankyrin repeat domain-c 99.9 2.5E-24 8.6E-29 151.7 12.8 102 52-166 80-181 (269)
76 2b0o_E UPLC1; arfgap, structur 99.9 2.4E-24 8.3E-29 154.0 12.7 125 25-163 152-285 (301)
77 3deo_A Signal recognition part 99.9 5.7E-24 2E-28 141.8 13.1 120 25-159 45-181 (183)
78 2fo1_E LIN-12 protein; beta-ba 99.9 9.8E-24 3.4E-28 155.0 15.6 146 18-166 161-342 (373)
79 3kea_A K1L; tropism, ANK repea 99.9 1.6E-24 5.5E-29 153.8 10.8 140 25-166 63-224 (285)
80 3d9h_A CDNA FLJ77766, highly s 99.9 2.1E-23 7.1E-28 148.1 16.5 124 27-166 128-251 (285)
81 3ui2_A Signal recognition part 99.9 2.7E-24 9.1E-29 149.6 11.4 123 25-162 46-185 (244)
82 4hbd_A KN motif and ankyrin re 99.9 8.1E-24 2.8E-28 149.6 13.8 129 17-160 139-273 (276)
83 3jxi_A Vanilloid receptor-rela 99.9 2.2E-24 7.5E-29 150.9 10.6 127 25-164 47-212 (260)
84 3eu9_A Huntingtin-interacting 99.9 7.8E-23 2.7E-27 140.9 18.3 145 20-166 39-206 (240)
85 4g8k_A 2-5A-dependent ribonucl 99.9 2.7E-23 9.2E-28 150.5 16.2 128 25-165 169-301 (337)
86 3eu9_A Huntingtin-interacting 99.9 2E-23 6.9E-28 143.8 14.5 129 25-166 10-138 (240)
87 3ljn_A Hypothetical protein; a 99.9 5.8E-24 2E-28 155.4 12.3 133 26-166 86-240 (364)
88 3jue_A Arfgap with coiled-coil 99.9 1.5E-23 5.2E-28 153.4 13.0 124 25-162 200-326 (368)
89 3t8k_A Uncharacterized protein 99.9 1.7E-24 5.8E-29 144.8 6.0 125 25-163 39-180 (186)
90 2fo1_E LIN-12 protein; beta-ba 99.9 5.2E-23 1.8E-27 151.1 14.3 130 20-162 232-371 (373)
91 3t8k_A Uncharacterized protein 99.9 6E-24 2E-28 142.1 7.5 126 26-167 8-151 (186)
92 3c5r_A BARD-1, BRCA1-associate 99.9 1.3E-22 4.4E-27 129.1 12.2 101 53-166 5-105 (137)
93 3aaa_C Myotrophin, protein V-1 99.9 1.9E-22 6.5E-27 126.1 11.7 100 54-166 3-102 (123)
94 2l6b_A NR1C; ankyrin, consensu 99.9 4.7E-23 1.6E-27 127.4 8.3 101 53-166 4-104 (115)
95 4g8k_A 2-5A-dependent ribonucl 99.9 1.5E-21 5E-26 141.4 16.1 128 25-166 26-154 (337)
96 1d9s_A Cyclin-dependent kinase 99.9 1.2E-22 4.2E-27 129.1 8.8 102 51-166 5-107 (136)
97 2jab_A H10-2-G3; HER2, darpin, 99.9 1.1E-21 3.8E-26 124.6 10.7 100 54-166 10-109 (136)
98 2vge_A RELA-associated inhibit 99.9 9.8E-22 3.4E-26 135.4 11.2 113 41-166 2-116 (229)
99 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.1E-21 1E-25 114.9 10.6 90 26-117 4-93 (93)
100 1n0r_A 4ANK, 4 ankyrin repeats 99.9 7.8E-21 2.7E-25 118.6 12.4 97 57-166 1-97 (126)
101 3ehr_A Osteoclast-stimulating 99.9 3.5E-21 1.2E-25 131.8 9.8 100 54-166 69-169 (222)
102 2zgd_A 3 repeat synthetic anky 99.9 8.4E-21 2.9E-25 116.4 10.3 93 51-156 17-109 (110)
103 1bi7_B P16INK4A, MTS1, multipl 99.8 2.7E-21 9.1E-26 125.6 8.1 101 52-166 6-107 (156)
104 2aja_A Ankyrin repeat family p 99.8 2.3E-22 7.9E-27 147.6 2.0 124 25-161 93-223 (376)
105 3deo_A Signal recognition part 99.8 9.7E-21 3.3E-25 126.1 9.7 98 55-166 41-139 (183)
106 1sw6_A Regulatory protein SWI6 99.8 1.2E-20 4.1E-25 136.3 10.2 119 17-148 158-327 (327)
107 3ui2_A Signal recognition part 99.8 1.7E-20 5.9E-25 130.3 9.0 97 56-166 43-140 (244)
108 2l6b_A NR1C; ankyrin, consensu 99.8 1.1E-20 3.6E-25 116.7 5.6 103 25-141 10-112 (115)
109 2b0o_E UPLC1; arfgap, structur 99.8 3.8E-20 1.3E-24 132.3 9.0 106 25-150 191-299 (301)
110 2aja_A Ankyrin repeat family p 99.8 6.6E-22 2.3E-26 145.2 -1.4 120 25-165 129-253 (376)
111 2zgd_A 3 repeat synthetic anky 99.8 6.3E-18 2.2E-22 103.5 10.5 86 24-111 24-109 (110)
112 1dcq_A PYK2-associated protein 99.8 7.8E-18 2.7E-22 119.1 12.0 96 20-118 166-264 (278)
113 3lvq_E ARF-GAP with SH3 domain 99.7 1.1E-17 3.8E-22 127.0 11.8 92 25-118 172-266 (497)
114 3jue_A Arfgap with coiled-coil 99.7 6.9E-18 2.4E-22 123.5 10.3 97 57-166 198-297 (368)
115 3zrh_A Ubiquitin thioesterase 69.5 14 0.0005 27.4 6.0 51 30-80 28-91 (454)
116 3zrh_A Ubiquitin thioesterase 55.1 30 0.001 25.7 5.5 58 101-158 31-90 (454)
117 1gp8_A Protein (scaffolding pr 53.2 11 0.00038 17.6 2.0 21 25-45 14-34 (40)
118 3mkq_B Coatomer subunit alpha; 21.3 1.7E+02 0.0059 18.8 8.7 110 26-161 10-143 (177)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2.4e-30 Score=170.79 Aligned_cols=134 Identities=17% Similarity=0.198 Sum_probs=113.9
Q ss_pred CCCCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCH
Q 038957 16 MDQELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETA 95 (169)
Q Consensus 16 ~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tp 95 (169)
.+..+..+. +|||.|+..++.++++.|+..+.. ++..+..|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||
T Consensus 30 vn~~d~~g~-t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-vn~~d~~G~Tp 106 (169)
T 4gpm_A 30 VNASDSDGR-TPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTP 106 (169)
T ss_dssp TTCCCTTSC-CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCCcCCCCC-CHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCH
Confidence 334445554 479999999999999999988865 677888999999999999999999999999888 78889999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 96 LLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 96 l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|+++.
T Consensus 107 Lh~A~~~g~~~~v~~Ll~~gad------------~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 107 LHHAAENGHKEVVKLLISKGAD------------VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred HHHHHHcCCHHHHHHHHHcCCC------------ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 9999999999999999999888 68899999999999999999999999999999874
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.4e-29 Score=167.15 Aligned_cols=128 Identities=19% Similarity=0.277 Sum_probs=120.8
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
...|+.|++.|+.++++.||+.+.. ++..|..|.||||+|+..++.+++++|+..+.+ ++.+|..|+||||+|+..|+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHHHHHHHcCC
Confidence 3579999999999999999999865 788899999999999999999999999999998 78899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 83 ~~~v~~Ll~~gad------------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~ 132 (169)
T 4gpm_A 83 KEVVKLLISKGAD------------VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTS 132 (169)
T ss_dssp HHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHCcCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 9999999999998 6999999999999999999999999999999998754
No 3
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=9.6e-29 Score=157.52 Aligned_cols=129 Identities=13% Similarity=0.031 Sum_probs=118.0
Q ss_pred CCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCC-CCCHH
Q 038957 18 QELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWK-GETAL 96 (169)
Q Consensus 18 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-g~tpl 96 (169)
..+..+. +|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+. ++.+++++|++.+.+ ++.++.. |.|||
T Consensus 7 ~~~~~g~-t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g~t~L 82 (136)
T 1d9s_A 7 MLGGSSD-AGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATLTRPV 82 (136)
T ss_dssp CCCCCCS-CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTTBCHH
T ss_pred CCCCCCc-cHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCCCCHH
Confidence 3344444 589999999999999999999854 67788999999999999 999999999999988 7888998 99999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCC
Q 038957 97 LIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTG 162 (169)
Q Consensus 97 ~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~ 162 (169)
|+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|+|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGAR------------LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCC------------CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999988 689999999999999999999999999999986
No 4
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=7.9e-28 Score=153.26 Aligned_cols=125 Identities=19% Similarity=0.218 Sum_probs=115.5
Q ss_pred CcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHH
Q 038957 22 TTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAAR 101 (169)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~ 101 (169)
....++||+|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|+.
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHH
Confidence 3345789999999999999999999865 677888999999999999999999999999888 78899999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcC
Q 038957 102 AGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARG 160 (169)
Q Consensus 102 ~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 160 (169)
.|+.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|
T Consensus 90 ~~~~~~v~~Ll~~g~~------------~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGAD------------VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCC------------CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999888 6889999999999999999999999999986
No 5
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.1e-27 Score=158.10 Aligned_cols=130 Identities=18% Similarity=0.182 Sum_probs=97.7
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
+..+. +|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|
T Consensus 33 ~~~g~-t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 109 (172)
T 3v30_A 33 DERGF-TPLIWASAFGEIETVRFLLEWGAD-PHILAKERESALSLASTGGYTDIVGLLLERDVD-INIYDWNGGTPLLYA 109 (172)
T ss_dssp CTTSC-CHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHH
T ss_pred CCCCC-CHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHH
Confidence 33443 468888888888888888777644 556677777888888888888888888877776 666777778888888
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 100 ARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
+..++.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|+++.
T Consensus 110 ~~~~~~~~v~~Ll~~ga~------------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 110 VRGNHVKCVEALLARGAD------------LTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF 162 (172)
T ss_dssp HHTTCHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHcCCHHHHHHHHHcCCC------------ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 888888888888877777 57777778888888888888888888888777643
No 6
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=2.7e-27 Score=148.28 Aligned_cols=123 Identities=24% Similarity=0.264 Sum_probs=115.7
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
++||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..++.
T Consensus 4 t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 4 TPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCH
T ss_pred cHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHcChH
Confidence 589999999999999999999855 567888999999999999999999999999888 788899999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCC
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTG 162 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~ 162 (169)
+++++|++.+++ ++.+|..|.||+|+|+..++.+++++|+++|++
T Consensus 82 ~~~~~Ll~~g~~------------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 82 EVVKLLLEAGAD------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCC------------CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999888 688999999999999999999999999999986
No 7
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.9e-27 Score=155.98 Aligned_cols=128 Identities=18% Similarity=0.211 Sum_probs=99.4
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++|+.|+..|+.+++++|++..+......+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 87 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVPLHNACSYGH 87 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTC
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHcCc
Confidence 46788888888888888887765544556666777888888888888888888887776 66777788888888888888
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|++++.
T Consensus 88 ~~~v~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 136 (165)
T 3twr_A 88 YEVAELLVKHGAV------------VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK 136 (165)
T ss_dssp HHHHHHHHHTTCC------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHhCCCC------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 8888888887777 577777888888888888888888888888877654
No 8
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=4e-27 Score=155.14 Aligned_cols=129 Identities=22% Similarity=0.294 Sum_probs=112.9
Q ss_pred ccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcC
Q 038957 24 MDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAG 103 (169)
Q Consensus 24 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~ 103 (169)
..++|++|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPLRLAALFG 91 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcC
Confidence 35689999999999999999998754 567788899999999999999999999998877 7778889999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 104 DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 92 ~~~~~~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 142 (169)
T 2y1l_E 92 HLEIVEVLLKNGAD------------VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQ 142 (169)
T ss_dssp CHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHHHcCCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 99999999998888 5888888999999999999999999999999887643
No 9
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=2.2e-27 Score=157.68 Aligned_cols=125 Identities=16% Similarity=0.177 Sum_probs=75.4
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|+..++.+
T Consensus 42 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~ 119 (179)
T 3f6q_A 42 PLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQ 119 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHH
Confidence 56666666666666666665533 444555566666666666666666666665555 5555666666666666666666
Q ss_pred HHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 107 IVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 107 ~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
++++|++.+++ ++.+|..|.||+++|+..++.+++++|+++|++++.
T Consensus 120 ~v~~Ll~~ga~------------~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 120 VAEDLVANGAL------------VSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp HHHHHHHTTCC------------SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHHHCCCC------------cchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 66666666555 455566666666666666666666666666666543
No 10
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=2.7e-27 Score=166.87 Aligned_cols=134 Identities=22% Similarity=0.225 Sum_probs=122.8
Q ss_pred CCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHH
Q 038957 18 QELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALL 97 (169)
Q Consensus 18 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~ 97 (169)
..+..+. +|||+|+..|+.+++++|+..++. ++..+..|.||+|+|+..++.+++++|++.+.+ ++.+|..|.||||
T Consensus 81 ~~d~~G~-TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~n~~d~~g~TpL~ 157 (269)
T 4b93_B 81 VTSQDGS-SPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAK-PNKKDLSGNTPLI 157 (269)
T ss_dssp CCCTTSC-CHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHH
T ss_pred CcCCCCC-CHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCCCC-CCCCCCCCCCHHH
Confidence 3344554 589999999999999999999865 667888999999999999999999999999988 7889999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 98 IAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 98 ~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+|+..|+.+++++|++.|++ ++.++..|+||||+|+..|+.+++++|+++|++++..
T Consensus 158 ~A~~~g~~~~v~~Ll~~gad------------vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~ 214 (269)
T 4b93_B 158 YACSGGHHELVALLLQHGAS------------INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVL 214 (269)
T ss_dssp HHHHTTCGGGHHHHHHTTCC------------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred HHHHCCCHHHHHHHHHCCCC------------CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 99999999999999999998 6999999999999999999999999999999998764
No 11
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=3.6e-27 Score=154.10 Aligned_cols=128 Identities=20% Similarity=0.134 Sum_probs=111.0
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
+..+. +|||.|+. |+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|
T Consensus 35 ~~~g~-t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 110 (162)
T 1ihb_A 35 NGFGR-TALQVMKL-GNPEIARRLLLRGAN-PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLA 110 (162)
T ss_dssp CTTSC-CHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred CccCc-cHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHH
Confidence 34443 57999888 999999999998754 667788899999999999999999999998887 778899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCC
Q 038957 100 ARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTG 162 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~ 162 (169)
+..|+.+++++|++.+++. ++.++..|.||||+|+..++.+++++|+++|+|
T Consensus 111 ~~~~~~~~v~~Ll~~g~~~-----------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 111 AKEGHLRVVEFLVKHTASN-----------VGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHTTCHHHHHHHHHHSCCC-----------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHcCCHHHHHHHHHccCCC-----------CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999999998884 688889999999999999999999999999986
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=6.1e-27 Score=151.87 Aligned_cols=127 Identities=21% Similarity=0.264 Sum_probs=113.3
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++|+.|+..|+.+++++|++.+... ..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPF--TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCC--CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCC--CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCh
Confidence 46899999999999999999988642 3577899999999999999999999998887 77889999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 80 ~~~v~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 129 (153)
T 1awc_B 80 ANIVEVLLKHGAD------------VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQ 129 (153)
T ss_dssp HHHHHHHHTTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHcCCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 9999999999888 5888999999999999999999999999999998654
No 13
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=3.6e-27 Score=154.95 Aligned_cols=125 Identities=14% Similarity=0.148 Sum_probs=74.3
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|+..|+.+
T Consensus 39 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~ 116 (167)
T 3v31_A 39 PLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRESALSLACSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVK 116 (167)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHH
Confidence 56666666666666666655433 344555566666666666666666666665555 4555556666666666666666
Q ss_pred HHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 107 IVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 107 ~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
++++|++.+++ ++.++..|.||+|+|+..|+.+++++|++++.++..
T Consensus 117 ~v~~Ll~~g~~------------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~ 163 (167)
T 3v31_A 117 CVKMLLESGAD------------PTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQ 163 (167)
T ss_dssp HHHHHHHTTCC------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHcCCC------------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 66666665555 355566666666666666666666666666555443
No 14
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=7.2e-27 Score=156.81 Aligned_cols=132 Identities=16% Similarity=0.172 Sum_probs=116.3
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
+..+. +|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|
T Consensus 32 d~~g~-t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 32 DSYNR-TPLMVACMLGMENAIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFSGKTPLMWS 108 (192)
T ss_dssp CTTCC-CHHHHHHHHTCGGGHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHH
T ss_pred CCCCC-CHHHHHHHcCCHHHHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHH
Confidence 34444 589999999999999999998754 567788899999999999999999999998887 778899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 100 ARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+..++.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 109 ~~~~~~~~v~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 163 (192)
T 2rfm_A 109 IIFGYSEMSYFLLEHGAN------------VNDRNLEGETPLIVASKYGRSEIVKKLLELGADISAR 163 (192)
T ss_dssp HHHTCHHHHHHHHHTTCC------------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCB
T ss_pred HHcCCHHHHHHHHHCCCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 999999999999999888 5888999999999999999999999999999988654
No 15
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=7.1e-28 Score=156.86 Aligned_cols=127 Identities=15% Similarity=0.057 Sum_probs=113.5
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCC-HHHHHHHcC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGET-ALLIAARAG 103 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t-pl~~a~~~~ 103 (169)
.++||.|+..|+.+++++|++.+.. ++..+..|.||||+|+ .++.+++++|++.+.+ ++.+|..|.| |||+|+..|
T Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~ttpL~~A~~~~ 89 (156)
T 1bi7_B 13 ADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPVHDAAREG 89 (156)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHHHHHHHHT
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHHCC
Confidence 4589999999999999999998754 6778889999999986 8999999999999888 7889999999 999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 104 DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 90 ~~~~v~~Ll~~ga~------------~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 90 FLDTLVVLHRAGAR------------LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp CHHHHHHHHHHTCC------------SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------
T ss_pred CHHHHHHHHHcCCC------------CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCcc
Confidence 99999999999988 6899999999999999999999999999999998654
No 16
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=9.5e-27 Score=153.60 Aligned_cols=128 Identities=21% Similarity=0.221 Sum_probs=120.9
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
+|||.|+..|+.+.+++++..++..++..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..++.
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-PHILAKERESALSLASTGGYT 82 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCH
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCCHHHHHHHCCCH
Confidence 4799999999999999999998877788899999999999999999999999999988 788899999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 83 ~~v~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 131 (172)
T 3v30_A 83 DIVGLLLERDVD------------INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTE 131 (172)
T ss_dssp HHHHHHHTTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHcCCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 999999999888 6889999999999999999999999999999998754
No 17
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.6e-26 Score=151.83 Aligned_cols=127 Identities=18% Similarity=0.122 Sum_probs=118.9
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
+|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.
T Consensus 5 t~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 5 LSVHQLAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp CCHHHHHHTTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCH
T ss_pred chHHHHHHCCCHHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCH
Confidence 579999999999999999999854 678899999999999999999999999999888 788899999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 83 ~~v~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 131 (167)
T 3v31_A 83 DIVKMLLDCGVD------------VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIE 131 (167)
T ss_dssp HHHHHHHHHTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHCCCC------------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 999999999988 6889999999999999999999999999999998654
No 18
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=2.2e-26 Score=152.90 Aligned_cols=128 Identities=24% Similarity=0.242 Sum_probs=120.3
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
++|+.|+..|+.+.+++|++.++..++..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..|+.
T Consensus 7 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~ 85 (179)
T 3f6q_A 7 DDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHLAASHGHR 85 (179)
T ss_dssp CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCH
Confidence 4799999999999999999997666788899999999999999999999999999888 788999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 86 ~~v~~Ll~~g~~------------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 134 (179)
T 3f6q_A 86 DIVQKLLQYKAD------------INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSIC 134 (179)
T ss_dssp HHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBC
T ss_pred HHHHHHHHcCCC------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchh
Confidence 999999999988 6899999999999999999999999999999998654
No 19
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=6.1e-26 Score=149.48 Aligned_cols=126 Identities=18% Similarity=0.166 Sum_probs=115.5
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
+..+. ++||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|
T Consensus 44 ~~~g~-t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A 120 (169)
T 2y1l_E 44 DASGW-TPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLA 120 (169)
T ss_dssp CTTSC-CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred CCCCC-CHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHH
Confidence 34444 589999999999999999999854 677888999999999999999999999999988 788899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcC
Q 038957 100 ARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARG 160 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 160 (169)
+..++.+++++|++.+++ ++.+|..|.||+|+|+..++.+++++|++.|
T Consensus 121 ~~~~~~~~v~~Ll~~g~~------------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 121 AMFGHLEIVEVLLKNGAD------------VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHTTCHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHcCCHHHHHHHHHcCCC------------CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999988 6889999999999999999999999999876
No 20
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=7.8e-27 Score=160.96 Aligned_cols=129 Identities=19% Similarity=0.097 Sum_probs=119.0
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGAN-VNSPDSHGWTPLHCAASCND 99 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTC
T ss_pred hHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCC
Confidence 4689999999999999999999864 678899999999999999999999999999988 78899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccC-CCCCcHHHHH--HhhCcHHHHHHHHHcCCCccccc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTE-FEGNTSLHNG--VGEYFIKLYKSLHARGTGVFSKI 167 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~-~~~~t~l~~A--~~~~~~~~~~~Ll~~g~~~~~~~ 167 (169)
.+++++|++.+++ ++.++ ..|+||||+| +..++.+++++|+++|++++...
T Consensus 100 ~~~v~~Ll~~ga~------------~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~ 153 (229)
T 2vge_A 100 TVICMALVQHGAA------------IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN 153 (229)
T ss_dssp HHHHHHHHTTTCC------------TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSG
T ss_pred HHHHHHHHHcCCC------------cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccccc
Confidence 9999999999998 57775 6999999999 99999999999999999886653
No 21
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=1.3e-26 Score=151.45 Aligned_cols=125 Identities=22% Similarity=0.240 Sum_probs=116.5
Q ss_pred ccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcC
Q 038957 24 MDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAG 103 (169)
Q Consensus 24 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~ 103 (169)
..++||.|+..|+.+++++|++.+.. ++..+..|.||||+|+. ++.+++++|++.+.+ ++.++..|.||||+|+..|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHT
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcC
Confidence 45789999999999999999998754 57788899999999999 999999999999888 7888999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 104 DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
+.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|++.
T Consensus 82 ~~~~v~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 82 FLDTLQTLLEFQAD------------VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129 (162)
T ss_dssp CHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred CHHHHHHHHHcCCC------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC
Confidence 99999999999988 6889999999999999999999999999999984
No 22
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=6.3e-26 Score=158.37 Aligned_cols=138 Identities=20% Similarity=0.130 Sum_probs=75.7
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+...++..+..|.||||+|+..++.+
T Consensus 60 ~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 138 (253)
T 1yyh_A 60 ALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEG 138 (253)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHH
Confidence 56666666666666666655533 34445555555555555555555555555544224444445555555555555555
Q ss_pred HHHHHHhcCCCCCC----CCCCCc-----------------cccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 107 IVSTLLNYVPAVKN----GTEAEP-----------------ESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 107 ~v~~ll~~~~~~~~----~~~~~~-----------------~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
++++|++.+++... |..... +.+++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 139 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 139 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 218 (253)
T ss_dssp HHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc
Confidence 55555554444200 000000 122566677777777777777777777777777777654
No 23
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=5.2e-26 Score=149.08 Aligned_cols=122 Identities=16% Similarity=0.069 Sum_probs=112.4
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.+|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|+..|+
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 120 (165)
T 3twr_A 43 STPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGK 120 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCC
Confidence 3589999999999999999999865 678888999999999999999999999999988 78899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCC
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGT 161 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~ 161 (169)
.+++++|++.+++ ++.+|..|.||+|+|+. ++.+++++|+++|+
T Consensus 121 ~~~v~~Ll~~ga~------------~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 121 YEICKLLLQHGAD------------PTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHHHTTCC------------TTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHHHHcCCC------------CcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999988 68999999999999877 88999999999886
No 24
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=1.7e-25 Score=153.04 Aligned_cols=90 Identities=20% Similarity=0.212 Sum_probs=40.1
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+...++..+..|.||||+|+..++.+
T Consensus 28 ~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 106 (223)
T 2f8y_A 28 ALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEG 106 (223)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred hHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHH
Confidence 44555555555555544444422 33334444444444444444444444444433223334444444444444444444
Q ss_pred HHHHHHhcCCC
Q 038957 107 IVSTLLNYVPA 117 (169)
Q Consensus 107 ~v~~ll~~~~~ 117 (169)
++++|++.+++
T Consensus 107 ~~~~Ll~~g~~ 117 (223)
T 2f8y_A 107 MLEDLINSHAD 117 (223)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 44444444433
No 25
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=1.3e-25 Score=150.66 Aligned_cols=126 Identities=18% Similarity=0.144 Sum_probs=116.3
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
+..+. +|||+|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|
T Consensus 65 ~~~g~-t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 141 (192)
T 2rfm_A 65 DIEGS-TALIWAVKNNRLGIAEKLLSKGSN-VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVA 141 (192)
T ss_dssp CTTSC-CHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHH
T ss_pred cccCc-cHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHH
Confidence 33444 589999999999999999999865 677888999999999999999999999999888 788999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcC
Q 038957 100 ARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARG 160 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 160 (169)
+..|+.+++++|++.+++ ++.+|..|.||+|+|+..++.+++++|+++|
T Consensus 142 ~~~~~~~~v~~Ll~~ga~------------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 142 SKYGRSEIVKKLLELGAD------------ISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHTCHHHHHHHHHTTCC------------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCC------------CCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999988 6899999999999999999999999999875
No 26
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=8e-26 Score=155.66 Aligned_cols=142 Identities=16% Similarity=0.142 Sum_probs=113.8
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhc----cccCCCCCCHHHHHH
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLL----RKNNWKGETALLIAA 100 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~----~~~~~~g~tpl~~a~ 100 (169)
.+|||.|+..|+.+++++|++.....++..+..|.||||+|+..|+.+++++|++.+++.. ...|..|.||||+|+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~ 83 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAV 83 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHH
Confidence 3589999999999999999998334477889999999999999999999999999988632 556779999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCC-CccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 101 RAGDPAIVSTLLNYVPAVKNGTEA-EPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 101 ~~~~~~~v~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
..|+.+++++|++.+++....... ......+..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 150 (232)
T 2rfa_A 84 INQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQ 150 (232)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 999999999999999885211110 001112223447888999998888889999999888887643
No 27
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=7.5e-26 Score=147.01 Aligned_cols=116 Identities=16% Similarity=0.096 Sum_probs=55.6
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
|||. +..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+
T Consensus 39 ~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~ 115 (156)
T 1bd8_A 39 ALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTA 115 (156)
T ss_dssp HHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHH
Confidence 4444 444555555544444432 334444445555555555555555555544444 3444444555555555555555
Q ss_pred HHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHH
Q 038957 107 IVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHA 158 (169)
Q Consensus 107 ~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~ 158 (169)
++++|++. ++ ++.+|..|.||||+|+..|+.+++++|++
T Consensus 116 ~v~~Ll~~-~~------------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 116 VVSFLAAE-SD------------LHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHTT-SC------------TTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHhc-cC------------CCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 55555444 33 34444445555555555555555555443
No 28
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=2.1e-25 Score=152.62 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=68.8
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
|||.|+..|+.+++++|++.++..++..+..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||+|+..|+.+
T Consensus 61 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~ 139 (223)
T 2f8y_A 61 PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVD 139 (223)
T ss_dssp HHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcCCHH
Confidence 566666666666666666655433445555566666666666666666666665555 4555555666666666666666
Q ss_pred HHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 107 IVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 107 ~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|+++
T Consensus 140 ~v~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 140 AAVVLLKNGAN------------KDMQNNREETPLFLAAREGSYETAKVLLDHFANR 184 (223)
T ss_dssp HHHHHHHTTCC------------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCCC------------CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 66666665555 2444444444444444444444444444444443
No 29
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=3.8e-25 Score=152.08 Aligned_cols=138 Identities=20% Similarity=0.176 Sum_probs=88.6
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..++.+
T Consensus 43 ~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~ 120 (231)
T 3aji_A 43 ALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHE 120 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHH
Confidence 56666666666666666666533 445555666666666666666666666666555 4555666666666666666666
Q ss_pred HHHHHHhcCCCCCCC----CCCCc-----------------cccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 107 IVSTLLNYVPAVKNG----TEAEP-----------------ESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 107 ~v~~ll~~~~~~~~~----~~~~~-----------------~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
++++|++.+++.... ..... +.+++.+|..|.||||+|+..++.+++++|+++|++++.
T Consensus 121 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 200 (231)
T 3aji_A 121 IAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI 200 (231)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Confidence 666666665553111 00000 233677788888888888888888888888888888764
Q ss_pred c
Q 038957 166 K 166 (169)
Q Consensus 166 ~ 166 (169)
.
T Consensus 201 ~ 201 (231)
T 3aji_A 201 E 201 (231)
T ss_dssp C
T ss_pred C
Confidence 3
No 30
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=3.7e-25 Score=149.17 Aligned_cols=135 Identities=20% Similarity=0.095 Sum_probs=112.7
Q ss_pred CCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHH
Q 038957 19 ELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLI 98 (169)
Q Consensus 19 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~ 98 (169)
.+..+. +|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|+..+...++..+..|.||||+
T Consensus 35 ~~~~g~-t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~ 112 (201)
T 3hra_A 35 VDTEGN-TPLNIAVHNNDIEIAKALIDRGAD-INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIP 112 (201)
T ss_dssp CCTTSC-CHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHH
T ss_pred CCCCCC-CHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHH
Confidence 334444 579999999999999999998764 567788899999999999999999999966654477888889999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCc-----HHHHHHHHHcCCCcccc
Q 038957 99 AARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYF-----IKLYKSLHARGTGVFSK 166 (169)
Q Consensus 99 a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~-----~~~~~~Ll~~g~~~~~~ 166 (169)
|+..|+.+++++|++.+... ++.+|..|.||||+|+..+. .+++++|+++|++++..
T Consensus 113 A~~~~~~~~v~~Ll~~g~~~-----------~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~ 174 (201)
T 3hra_A 113 AAEKGHIDNVKLLLEDGRED-----------IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIK 174 (201)
T ss_dssp HHHTTCHHHHHHHHHHCCCC-----------TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCC
T ss_pred HHHcCCHHHHHHHHHcCCCC-----------cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCcc
Confidence 99999999999999988332 68888999999999998887 89999999999988654
No 31
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=3.7e-25 Score=152.69 Aligned_cols=127 Identities=17% Similarity=0.122 Sum_probs=85.4
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
|||.|+..|+.+++++|++.++..++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..|+.+
T Consensus 80 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~ 158 (237)
T 3b7b_A 80 CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSGCVD 158 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCCCHH
Confidence 566666666666666665555333445555566666666666666666666665555 4555666666666666666666
Q ss_pred HHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 107 IVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 107 ~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 159 ~~~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~ 206 (237)
T 3b7b_A 159 IAEILLAAKCD------------LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLK 206 (237)
T ss_dssp HHHHHHTTTCC------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC
T ss_pred HHHHHHHcCCC------------CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCcc
Confidence 66666666555 6778888899999999999999999999998887643
No 32
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=3.5e-25 Score=152.29 Aligned_cols=139 Identities=16% Similarity=0.120 Sum_probs=107.6
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
+++||.|+..|+.+.+++++..++...+..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..|+
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTC
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCHHHHHHHcCH
Confidence 35799999999999999999998877788899999999999999999999999999887 78889999999999999999
Q ss_pred HHHHHHHHhcCCCCCCC----CCCCc-----------------cccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 105 PAIVSTLLNYVPAVKNG----TEAEP-----------------ESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~----~~~~~-----------------~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
.+++++|++.+++.... ..... +.+++.++..|.||||+|+..|+.+++++|+++|+++
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 165 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAST 165 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Confidence 99999999998885111 10000 2334444555555555555555555555555555554
Q ss_pred c
Q 038957 164 F 164 (169)
Q Consensus 164 ~ 164 (169)
+
T Consensus 166 ~ 166 (231)
T 3aji_A 166 N 166 (231)
T ss_dssp C
T ss_pred c
Confidence 4
No 33
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=2.3e-25 Score=153.91 Aligned_cols=126 Identities=17% Similarity=0.176 Sum_probs=78.3
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhh-----hhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCC-CCCCHHHHH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQN-----IFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNW-KGETALLIA 99 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~-----~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~g~tpl~~a 99 (169)
+|||+|+..|+.+++++|+..+.. ..+..+..|.||||+|+..|+.+++++|++.+.+ ++.++. .|.||||+|
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A 158 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLA 158 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHH
Confidence 356666666666666666665431 1344555566666666666666666666666655 444554 666666666
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 100 ARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
+..|+.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|+++|++..
T Consensus 159 ~~~~~~~~v~~Ll~~ga~------------~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 159 VDLQNPDLVSLLLKCGAD------------VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HHTTCHHHHHHHHTTTCC------------SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HHcCCHHHHHHHHHcCCC------------CCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 666666666666666665 46666666666666666666666666666666543
No 34
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=9.6e-25 Score=150.26 Aligned_cols=133 Identities=22% Similarity=0.169 Sum_probs=116.7
Q ss_pred CCCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhh----ccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCC--
Q 038957 17 DQELPTTMDHELLNVLRREDEHQIRLLAVRMQNIF----STMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNW-- 90 (169)
Q Consensus 17 ~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~----~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-- 90 (169)
+..+..+. +|||.|+..|+.+++++|++.++... +..+..|.||||+|+..|+.+++++|++.+.+ ++..+.
T Consensus 31 ~~~~~~g~-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~ 108 (232)
T 2rfa_A 31 HQRGAMGE-TALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGAS-VSARATGS 108 (232)
T ss_dssp TCCCTTSC-CHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSG
T ss_pred ccCCCCCC-CHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCC-CCcccCCc
Confidence 33444554 48999999999999999999987643 45567899999999999999999999999887 555544
Q ss_pred -----------CCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHH----HH
Q 038957 91 -----------KGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLY----KS 155 (169)
Q Consensus 91 -----------~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~----~~ 155 (169)
.|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..++.+++ ++
T Consensus 109 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~ 176 (232)
T 2rfa_A 109 VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD------------IRAQDSLGNTVLHILILQPNKTFACQMYNL 176 (232)
T ss_dssp GGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHTCSCHHHHHHHHHH
T ss_pred ceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC------------CCCCCCCCCCHHHHHHHcCChHHHHHHHHH
Confidence 799999999999999999999999988 699999999999999999999988 99
Q ss_pred HHHcCCCc
Q 038957 156 LHARGTGV 163 (169)
Q Consensus 156 Ll~~g~~~ 163 (169)
|+++|++.
T Consensus 177 Ll~~g~~~ 184 (232)
T 2rfa_A 177 LLSYDGGD 184 (232)
T ss_dssp HHHTTCSC
T ss_pred HHhcCCch
Confidence 99999976
No 35
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=1.7e-25 Score=156.12 Aligned_cols=137 Identities=15% Similarity=0.161 Sum_probs=95.2
Q ss_pred HHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHH
Q 038957 29 LNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIV 108 (169)
Q Consensus 29 ~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v 108 (169)
..+...++.+++++|+..++.+....+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..|+.+++
T Consensus 28 ~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v 106 (253)
T 1yyh_A 28 NSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVF 106 (253)
T ss_dssp ------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred chhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHH
Confidence 3477889999999999999876667789999999999999999999999999988 788999999999999999999999
Q ss_pred HHHHhcCCC-CC----CCCCCCc-----------------cccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 109 STLLNYVPA-VK----NGTEAEP-----------------ESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 109 ~~ll~~~~~-~~----~~~~~~~-----------------~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
++|++.++. .. .|..... +.+++.+|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 107 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 186 (253)
T 1yyh_A 107 QILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQ 186 (253)
T ss_dssp HHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 999999873 21 1111111 4567778888999999999999999999999999887654
No 36
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=1.7e-25 Score=145.01 Aligned_cols=118 Identities=15% Similarity=0.072 Sum_probs=110.6
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.+|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|+..|+
T Consensus 35 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 112 (153)
T 1awc_B 35 TSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNH 112 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCC
Confidence 4589999999999999999998755 677888999999999999999999999999888 78899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHH
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSL 156 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L 156 (169)
.+++++|++.|++ ++.+|..|.||+|+|+..|+.+++++|
T Consensus 113 ~~~v~~Ll~~ga~------------~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 113 QEVVELLIKYGAD------------VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCC------------ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999988 688999999999999999999999987
No 37
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.93 E-value=3.8e-25 Score=157.06 Aligned_cols=144 Identities=15% Similarity=-0.014 Sum_probs=115.2
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
+..+ .+|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|
T Consensus 56 ~~~g-~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A 132 (285)
T 3d9h_A 56 AVSD-WSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNA 132 (285)
T ss_dssp SCCS-CCHHHHHHHTTCHHHHHHHHHTTCC-SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHH
T ss_pred CccC-CCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHH
Confidence 3344 3589999999999999999998754 677888999999999999999999999998887 778899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCC---CCCCCc-----------------cccccccCCCCCcHHHHHHhhCcHHHHHHHHHc
Q 038957 100 ARAGDPAIVSTLLNYVPAVKN---GTEAEP-----------------ESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHAR 159 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~---~~~~~~-----------------~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 159 (169)
+..|+.+++++|++.+++... |..... +.+++.+|..|.||||+|+..|+.+++++|+++
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 212 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES 212 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC
Confidence 999999999999998877521 111111 345666777777888888888888888888888
Q ss_pred CCCcccc
Q 038957 160 GTGVFSK 166 (169)
Q Consensus 160 g~~~~~~ 166 (169)
|++++..
T Consensus 213 ga~~~~~ 219 (285)
T 3d9h_A 213 GADVNQG 219 (285)
T ss_dssp TCCTTCC
T ss_pred CCCCCCC
Confidence 7777643
No 38
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=5.2e-25 Score=151.07 Aligned_cols=127 Identities=20% Similarity=0.145 Sum_probs=89.3
Q ss_pred HHHHHHHHccCHHHHHHHHHHh--hhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhc--chhccccCCCCCCHHHHHHH
Q 038957 26 HELLNVLRREDEHQIRLLAVRM--QNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQ--LSLLRKNNWKGETALLIAAR 101 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~--~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~g~tpl~~a~~ 101 (169)
+|||+|+..|+.+++++|++.+ .......+..|.||||+|+..|+.+++++|++.+ .+ ++..+..|.||||+|+.
T Consensus 38 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~ 116 (228)
T 2dzn_A 38 IPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVG 116 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHH
Confidence 3677777777777777777666 3222225566777777777777777777777665 44 55566667777777777
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcC-CCccc
Q 038957 102 AGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARG-TGVFS 165 (169)
Q Consensus 102 ~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~ 165 (169)
.++.+++++|++.+++ ++.++..|.||||+|+..|+.+++++|+++| ++++.
T Consensus 117 ~~~~~~~~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 169 (228)
T 2dzn_A 117 KKWFEVSQFLIENGAS------------VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW 169 (228)
T ss_dssp TTCHHHHHHHHHTTCC------------SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCC
T ss_pred cCCHhHHHHHHHcCCC------------ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccC
Confidence 7777777777776666 5777888888888888888888888888888 76654
No 39
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=2.5e-25 Score=157.00 Aligned_cols=100 Identities=21% Similarity=0.175 Sum_probs=70.5
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCC-CCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccc
Q 038957 54 MSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNW-KGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRM 132 (169)
Q Consensus 54 ~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 132 (169)
.+..|.||||+|+..|+.+++++|++.+.+ ++..+. .|.||||+|+..|+.+++++|++.|++ ++.
T Consensus 154 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad------------~~~ 220 (282)
T 1oy3_D 154 ENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD------------PTA 220 (282)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------TTC
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC------------Ccc
Confidence 444566666666666666666666666655 444443 366666666666666666666666666 688
Q ss_pred cCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 133 TEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 133 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 221 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 254 (282)
T 1oy3_D 221 RMYGGRTPLGSALLRPNPILARLLRAHGAPEPED 254 (282)
T ss_dssp CCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCC
T ss_pred cccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcC
Confidence 8888889999999888889999999998887653
No 40
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=2.1e-25 Score=154.10 Aligned_cols=133 Identities=22% Similarity=0.139 Sum_probs=118.8
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcch-----hccccCCCCCC
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLS-----LLRKNNWKGET 94 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~-----~~~~~~~~g~t 94 (169)
+..+. +|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|+..+.. .+...+..|.|
T Consensus 42 ~~~g~-t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 119 (236)
T 1ikn_D 42 NNLQQ-TPLHLAVITNQPEIAEALLGAGCD-PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHT 119 (236)
T ss_dssp CTTCC-CHHHHHHHTTCHHHHHCCCSCCCC-SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCC
T ss_pred CCCCC-CHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCC
Confidence 33444 589999999999999999998854 677888999999999999999999999998753 25677889999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCC-CCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 95 ALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEF-EGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 95 pl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
|||+|+..|+.+++++|++.+++ ++.++. .|.||||+|+..|+.+++++|+++|++++..
T Consensus 120 ~L~~A~~~~~~~~v~~Ll~~g~~------------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 180 (236)
T 1ikn_D 120 CLHLASIHGYLGIVELLVSLGAD------------VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 180 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCC------------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC------------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999998 588887 9999999999999999999999999998754
No 41
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=3.3e-26 Score=145.83 Aligned_cols=125 Identities=18% Similarity=0.151 Sum_probs=110.5
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.+|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|+..++
T Consensus 11 ~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 88 (137)
T 3c5r_A 11 ETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLHDAAKNGH 88 (137)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHHHHHHcCC
Confidence 3589999999999999999998854 677889999999999999999999999999888 78899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
.+++++|++.+++ ++.+|..|.||+|+|+..+..+++++|.+.+...
T Consensus 89 ~~~v~~Ll~~ga~------------~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s~ 135 (137)
T 3c5r_A 89 VDIVKLLLSYGAS------------RNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSS 135 (137)
T ss_dssp HHHHHHHHHTTCC------------TTCCCTTSCCGGGGCCCHHHHHHHSCC-------
T ss_pred HHHHHHHHHcCCC------------CCCCCCCCCCHHHHHhhccHHHHHhhccccccCC
Confidence 9999999999988 6899999999999999999999999888876654
No 42
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=5.7e-25 Score=155.14 Aligned_cols=145 Identities=17% Similarity=0.172 Sum_probs=111.5
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhh--hhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQN--IFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALL 97 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~--~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~ 97 (169)
+..+. +|||.|+..|+.+++++|++.+.. .++..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||
T Consensus 6 d~~g~-t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~ 83 (282)
T 1oy3_D 6 TEDGD-TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAERGGHTALH 83 (282)
T ss_dssp CTTCC-CHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTSCCHHH
T ss_pred CCCCC-cHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHH
Confidence 44454 589999999999999999998764 2677889999999999999999999999999988 7889999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCC-----------------------------------CccccccccCCCCCcHHH
Q 038957 98 IAARAGDPAIVSTLLNYVPAVKNGTEA-----------------------------------EPESLLRMTEFEGNTSLH 142 (169)
Q Consensus 98 ~a~~~~~~~~v~~ll~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~t~l~ 142 (169)
+|+..|+.+++++|++.++........ ..+.+++.++..|.||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 999999999999999987663110000 002234555666666666
Q ss_pred HHHhhCcHHHHHHHHHcCCCcccc
Q 038957 143 NGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 143 ~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+|+..|+.+++++|+++|++++..
T Consensus 164 ~A~~~g~~~~v~~Ll~~g~~~~~~ 187 (282)
T 1oy3_D 164 VAVIHKDAEMVRLLRDAGADLNKP 187 (282)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCC
Confidence 666666666666666666665543
No 43
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=3.7e-25 Score=151.82 Aligned_cols=129 Identities=17% Similarity=0.081 Sum_probs=118.1
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhh-hhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQ-NIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAG 103 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~ 103 (169)
.+|||.|+..|+.+++++|++.+. ..++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..|
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 151 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVG 151 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHHHHHHcC
Confidence 358999999999999999999872 22567788899999999999999999999999888 7889999999999999999
Q ss_pred CHHHHHHHHhcC-CCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHH-HcCCCcccc
Q 038957 104 DPAIVSTLLNYV-PAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLH-ARGTGVFSK 166 (169)
Q Consensus 104 ~~~~v~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll-~~g~~~~~~ 166 (169)
+.+++++|++.+ ++ ++.+|..|+||||+|+..++.+++++|+ ++|++++..
T Consensus 152 ~~~~v~~Ll~~g~~~------------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~ 204 (228)
T 2dzn_A 152 SLKLIELLCGLGKSA------------VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLV 204 (228)
T ss_dssp CHHHHHHHHTTTCCC------------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCB
T ss_pred CHHHHHHHHhcCccc------------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCcc
Confidence 999999999998 55 7889999999999999999999999999 899998754
No 44
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=8.1e-25 Score=147.49 Aligned_cols=128 Identities=15% Similarity=0.053 Sum_probs=116.2
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
+..+. +|||.|+..|+.+++++|++.+...++..+..|.||||+|+..++.+++++|++.+...++.+|..|.||||+|
T Consensus 69 ~~~g~-t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 147 (201)
T 3hra_A 69 NSISD-SPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEA 147 (201)
T ss_dssp CTTSC-CHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHH
T ss_pred CCCCC-CHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHH
Confidence 33443 58999999999999999997776557788999999999999999999999999998433888999999999999
Q ss_pred HHcCC-----HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcC
Q 038957 100 ARAGD-----PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARG 160 (169)
Q Consensus 100 ~~~~~-----~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 160 (169)
+..++ .+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 148 ~~~~~~~~~~~~~v~~Ll~~ga~------------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 148 VGLREGNQLYQDIVKLLMENGAD------------QSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHSSCCSHHHHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHhccchhhHHHHHHHHHHCCCC------------CCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99998 9999999999988 6899999999999999999999999999987
No 45
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=5.4e-25 Score=142.93 Aligned_cols=120 Identities=20% Similarity=0.198 Sum_probs=111.4
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++||.|+..|+.+.+++|++.....++..+..|.||||+ +..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCc
Confidence 3689999999999999999998433467888999999999 999999999999999888 78899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHH
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHA 158 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~ 158 (169)
.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|++
T Consensus 81 ~~~v~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 122 (156)
T 1bd8_A 81 LDTLKVLVEHGAD------------VNVPDGTGALPIHLAVQEGHTAVVSFLAA 122 (156)
T ss_dssp HHHHHHHHHTTCC------------SCCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHHHHHcCCC------------CCCcCCCCCcHHHHHHHhChHHHHHHHHh
Confidence 9999999999988 68899999999999999999999999986
No 46
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=1e-24 Score=152.86 Aligned_cols=124 Identities=16% Similarity=0.061 Sum_probs=74.7
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
+|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++ .+..|.||||+|+..|+.
T Consensus 38 t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~-~~~~g~t~L~~A~~~~~~ 114 (261)
T 2xai_A 38 SPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGAS-VQ-PESDLASPIHEAARRGHV 114 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SS-CSCTTCCHHHHHHHTTCH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcCcH
Confidence 367777777777777777776643 455666677777777777777777777766655 32 233466666666666666
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcc
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVF 164 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 164 (169)
+++++|++.+++. +.++..|.||||+|+..++.+++++|+++|++++
T Consensus 115 ~~v~~Ll~~g~~~------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 115 ECVNSLIAYGGNI------------DHKISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HHHHHHHHTTCCT------------TCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHcCCCC------------CcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 6666666666653 4444444444444444444444444444444443
No 47
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=1.2e-24 Score=154.99 Aligned_cols=139 Identities=17% Similarity=0.094 Sum_probs=101.6
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++|+.|+..|+.+++++|+..+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTC
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCC
Confidence 4578888888888888888877754 566677777888888888888888888877776 66677777888888888888
Q ss_pred HHHHHHHHhcCCCCCCC----C----------------------------------------------------------
Q 038957 105 PAIVSTLLNYVPAVKNG----T---------------------------------------------------------- 122 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~----~---------------------------------------------------------- 122 (169)
.+++++|++.+++.... .
T Consensus 119 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 198 (299)
T 1s70_B 119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS 198 (299)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTT
T ss_pred HHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCC
Confidence 88888887777655110 0
Q ss_pred --CCCc-----------------cccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 123 --EAEP-----------------ESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 123 --~~~~-----------------~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
.... +.+++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA 260 (299)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 0000 344677788888888888888888888888888888764
No 48
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=4.1e-26 Score=158.19 Aligned_cols=128 Identities=14% Similarity=0.075 Sum_probs=115.0
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++||.|+..|+.++++.|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~ 115 (239)
T 1ycs_B 38 LALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNN 115 (239)
T ss_dssp HHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTC
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCC
Confidence 4689999999999999999988864 678889999999999999999999999999888 78899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCC-cHHHHH--HhhCcHHHHHHHHHcCCCcccc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGN-TSLHNG--VGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~-t~l~~A--~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
.+++++|++.+++ ++.++..+. ||+|+| +..|+.+++++|+++|++++..
T Consensus 116 ~~~v~~Ll~~ga~------------~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~ 168 (239)
T 1ycs_B 116 VQVCKFLVESGAA------------VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIM 168 (239)
T ss_dssp HHHHHHHHHTTCC------------TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHcCCC------------cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccc
Confidence 9999999999988 577777666 999999 7889999999999999887653
No 49
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=1.9e-24 Score=149.33 Aligned_cols=138 Identities=20% Similarity=0.247 Sum_probs=80.6
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcc----hhccccCCCCCCHHHHHHHc
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQL----SLLRKNNWKGETALLIAARA 102 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~----~~~~~~~~~g~tpl~~a~~~ 102 (169)
|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+. . ++..+..|.||||+|+..
T Consensus 49 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~ 126 (241)
T 1k1a_A 49 PLHLAVITTLPSVVRLLVTAGAS-PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD-LEARNYDGLTALHVAVNT 126 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCC-TTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-ccccCcCCCcHHHHHHHc
Confidence 56666666666666666655532 33445555555555555555555555555543 2 344445555555555555
Q ss_pred CCHHHHHHHHhcCCCCCC-----CCCCCc-----------------cccccccCCCCCcHHHHHHhhCcHHHHHHHHHcC
Q 038957 103 GDPAIVSTLLNYVPAVKN-----GTEAEP-----------------ESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARG 160 (169)
Q Consensus 103 ~~~~~v~~ll~~~~~~~~-----~~~~~~-----------------~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 160 (169)
++.+++++|++.+++... |..... +.+++.+|..|.||||+|+..++.+++++|+++|
T Consensus 127 ~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 206 (241)
T 1k1a_A 127 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG 206 (241)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 555555555555544311 000000 2336778888888888888888888888888888
Q ss_pred CCcccc
Q 038957 161 TGVFSK 166 (169)
Q Consensus 161 ~~~~~~ 166 (169)
++++..
T Consensus 207 a~~~~~ 212 (241)
T 1k1a_A 207 ADSSLK 212 (241)
T ss_dssp CCTTCC
T ss_pred CCCCCc
Confidence 887643
No 50
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=3e-25 Score=156.96 Aligned_cols=134 Identities=14% Similarity=0.084 Sum_probs=88.4
Q ss_pred CCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHH-----HhCCHHHHHHHHHhcchhccccCCCC
Q 038957 18 QELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAI-----RFQKHKVVQEILWRQLSLLRKNNWKG 92 (169)
Q Consensus 18 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~-----~~~~~~~~~~ll~~~~~~~~~~~~~g 92 (169)
..+..+. +|||+|+..|+.+++++|++.+...++..+..|.||||+|+ ..++.+++++|+..+.. ....+..|
T Consensus 106 ~~d~~g~-T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g 183 (276)
T 4hbd_A 106 IADSNGN-TALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNI-NAKASQAG 183 (276)
T ss_dssp CCCTTSC-CHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTC
T ss_pred CCCCCCC-CHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCC
Confidence 3344554 48999999999999999999886445666666666666666 44556666666665544 44555566
Q ss_pred CCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHH-cCCCccc
Q 038957 93 ETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHA-RGTGVFS 165 (169)
Q Consensus 93 ~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~ 165 (169)
.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|++ .|++++.
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad------------~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~ 245 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEAD------------VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL 245 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCC------------CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC
Confidence 6666666666666666666666665 45666666666666666666666666666 5666543
No 51
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=7.6e-26 Score=158.32 Aligned_cols=133 Identities=17% Similarity=0.197 Sum_probs=114.7
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCC--------------CCCCcHHHHHHHhCCHHHHHHHHH---hcchhccc
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMS--------------PRGNIVLHMAIRFQKHKVVQEILW---RQLSLLRK 87 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~--------------~~g~~~l~~a~~~~~~~~~~~ll~---~~~~~~~~ 87 (169)
.+|||+|+..|+.+++++|++.+.. ++..+ ..|.||||+|+..|+.+++++|++ .+.+ ++.
T Consensus 94 ~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~-~~~ 171 (260)
T 3jxi_A 94 QTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD-LRR 171 (260)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-Ccc
Confidence 4589999999999999999999865 55555 579999999999999999999999 7777 788
Q ss_pred cCCCCCCHHHHHHHcCC---------HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHH
Q 038957 88 NNWKGETALLIAARAGD---------PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHA 158 (169)
Q Consensus 88 ~~~~g~tpl~~a~~~~~---------~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~ 158 (169)
+|..|+||||+|+..++ .+++++|++.|++.... ....+.+|..|+||||+|+..|+.+++++|++
T Consensus 172 ~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~-----~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 246 (260)
T 3jxi_A 172 QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPD-----TNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR 246 (260)
T ss_dssp CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTT-----CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccc-----cchhhcccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999888 79999999998872000 00016789999999999999999999999999
Q ss_pred cCCCcc
Q 038957 159 RGTGVF 164 (169)
Q Consensus 159 ~g~~~~ 164 (169)
+|++..
T Consensus 247 ~g~~~~ 252 (260)
T 3jxi_A 247 REIADA 252 (260)
T ss_dssp HHHHHH
T ss_pred hCCCcc
Confidence 998754
No 52
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=7.5e-25 Score=153.60 Aligned_cols=126 Identities=17% Similarity=0.096 Sum_probs=116.0
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
+|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~ 82 (261)
T 2xai_A 5 SPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSW 82 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCH
Confidence 589999999999999999999855 678889999999999999999999999999988 788999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+++++|++.+++. + .+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 83 ~~v~~Ll~~g~~~------------~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 130 (261)
T 2xai_A 83 DCVNLLLQHGASV------------Q-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHK 130 (261)
T ss_dssp HHHHHHHHTTCCS------------S-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHCCCCC------------C-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcC
Confidence 9999999999883 4 3456999999999999999999999999998754
No 53
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=2.9e-25 Score=156.46 Aligned_cols=127 Identities=23% Similarity=0.238 Sum_probs=113.2
Q ss_pred cHHHHHHHHc---cCHHHHHHHHHHhhhh------hcc----CCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCC-
Q 038957 25 DHELLNVLRR---EDEHQIRLLAVRMQNI------FST----MSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNW- 90 (169)
Q Consensus 25 ~~~l~~a~~~---g~~~~~~~ll~~~~~~------~~~----~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~- 90 (169)
.+|||+|+.. |+.+++++|++.+... ++. .+..|.||||+|+..|+.+++++|++.+.+ ++.++.
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~ 133 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANG 133 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCS
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccc
Confidence 4589999986 9999999999987531 222 456899999999999999999999999888 676776
Q ss_pred -------------CCCCHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCc-----
Q 038957 91 -------------KGETALLIAARAGDPAIVSTLLN---YVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYF----- 149 (169)
Q Consensus 91 -------------~g~tpl~~a~~~~~~~~v~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~----- 149 (169)
.|.||||+|+..|+.+++++|++ .+++ ++.+|..|+||||+|+..++
T Consensus 134 ~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad------------~~~~d~~g~tpLh~A~~~~~~~~~~ 201 (273)
T 2pnn_A 134 DFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD------------ISARDSVGNTVLHALVEVADNTVDN 201 (273)
T ss_dssp GGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC------------TTCCCTTSCCHHHHHHHHCCSCHHH
T ss_pred cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC------------ceeeCCCCCcHHHHHHHccCcchhH
Confidence 79999999999999999999999 8888 69999999999999999888
Q ss_pred ----HHHHHHHHHcCCCcc
Q 038957 150 ----IKLYKSLHARGTGVF 164 (169)
Q Consensus 150 ----~~~~~~Ll~~g~~~~ 164 (169)
.+++++|+++|++++
T Consensus 202 ~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 202 TKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhhhcc
Confidence 799999999999986
No 54
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=1.9e-25 Score=155.97 Aligned_cols=126 Identities=19% Similarity=0.220 Sum_probs=114.5
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCC-------------CCcHHHHHHHhCCHHHHHHHHH---hcchhcccc
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPR-------------GNIVLHMAIRFQKHKVVQEILW---RQLSLLRKN 88 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~-------------g~~~l~~a~~~~~~~~~~~ll~---~~~~~~~~~ 88 (169)
.+|||.|+..|+.+++++|++.+.. ++..+.. |.||||+|+..|+.+++++|++ .+.+ ++.+
T Consensus 91 ~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~-~n~~ 168 (256)
T 2etb_A 91 HSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS-LEAT 168 (256)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-cCcc
Confidence 4589999999999999999999865 5556654 9999999999999999999999 7887 8889
Q ss_pred CCCCCCHHHHHHH--cCCHH-------HHHHHHhcCCCCCCCCCCCccccc-------cccCCCCCcHHHHHHhhCcHHH
Q 038957 89 NWKGETALLIAAR--AGDPA-------IVSTLLNYVPAVKNGTEAEPESLL-------RMTEFEGNTSLHNGVGEYFIKL 152 (169)
Q Consensus 89 ~~~g~tpl~~a~~--~~~~~-------~v~~ll~~~~~~~~~~~~~~~~~~-------~~~~~~~~t~l~~A~~~~~~~~ 152 (169)
|..|+||||+|+. .++.+ ++++|++.|++ + +.+|..|.||||+|+..|+.++
T Consensus 169 d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~------------~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 169 DSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR------------LCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp CTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH------------HSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC------------cccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 9999999999999 78888 99999999888 5 7889999999999999999999
Q ss_pred HHHHHHcCCCcc
Q 038957 153 YKSLHARGTGVF 164 (169)
Q Consensus 153 ~~~Ll~~g~~~~ 164 (169)
+++|+++|++..
T Consensus 237 v~~Ll~~g~~~~ 248 (256)
T 2etb_A 237 FRHILQREFSGA 248 (256)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHhCCCCCC
Confidence 999999987653
No 55
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=2.7e-25 Score=156.68 Aligned_cols=133 Identities=16% Similarity=0.143 Sum_probs=112.4
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCC--------------CCCcHHHHHHHhCCHHHHHHHHH---hcchhccc
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSP--------------RGNIVLHMAIRFQKHKVVQEILW---RQLSLLRK 87 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~--------------~g~~~l~~a~~~~~~~~~~~ll~---~~~~~~~~ 87 (169)
.+|||+|+..|+.+++++|++.+.. ++..+. .|.||||+|+..|+.+++++|++ .+.+ ++.
T Consensus 102 ~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad-~~~ 179 (273)
T 2pnn_A 102 QTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD-ISA 179 (273)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-cee
Confidence 4589999999999999999999865 455554 79999999999999999999999 7777 788
Q ss_pred cCCCCCCHHHHHHHcCC---------HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHH
Q 038957 88 NNWKGETALLIAARAGD---------PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHA 158 (169)
Q Consensus 88 ~~~~g~tpl~~a~~~~~---------~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~ 158 (169)
+|..|+||||+|+..|+ .+++++|++.|++.... ...++.+|..|.||||+|+..|+.+++++|++
T Consensus 180 ~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~-----~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 254 (273)
T 2pnn_A 180 RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPT-----LKLEEITNRKGLTPLALAASSGKIGVLAYILQ 254 (273)
T ss_dssp CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTT-----CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccc-----cccccccCCCCCCHHHHHHHhChHHHHHHHHH
Confidence 99999999999999998 89999999998873000 00013589999999999999999999999999
Q ss_pred cCC-Ccc
Q 038957 159 RGT-GVF 164 (169)
Q Consensus 159 ~g~-~~~ 164 (169)
+|+ |..
T Consensus 255 ~ga~dp~ 261 (273)
T 2pnn_A 255 REIHEPE 261 (273)
T ss_dssp HHTC---
T ss_pred CCCCCch
Confidence 999 554
No 56
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=3.4e-25 Score=154.71 Aligned_cols=130 Identities=22% Similarity=0.170 Sum_probs=114.2
Q ss_pred CCCcccHHHHHHHHc---cCHHHHHHHHHHhhhhhc----------cCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhcc
Q 038957 20 LPTTMDHELLNVLRR---EDEHQIRLLAVRMQNIFS----------TMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLR 86 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~----------~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 86 (169)
+..+. +|||+|+.. |+.+++++|++.+..... ..+..|.||||+|+..|+.+++++|++.+.+ ++
T Consensus 40 d~~g~-t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~ 117 (256)
T 2etb_A 40 GSTGK-TCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VH 117 (256)
T ss_dssp TTTTB-CHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TT
T ss_pred CCCCC-CHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CC
Confidence 44454 589999999 999999999999865321 1346799999999999999999999999888 67
Q ss_pred ccCCC-------------CCCHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCccccccccCCCCCcHHHHHHh--hC
Q 038957 87 KNNWK-------------GETALLIAARAGDPAIVSTLLN---YVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVG--EY 148 (169)
Q Consensus 87 ~~~~~-------------g~tpl~~a~~~~~~~~v~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~--~~ 148 (169)
.++.. |.||||+|+..|+.+++++|++ .|++ ++.+|..|+||||+|+. .+
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~------------~n~~d~~g~TpLh~A~~~~~~ 185 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS------------LEATDSLGNTVLHALVMIADN 185 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------------TTCCCTTSCCHHHHHHHHCCS
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------------cCccCCCCCCHHHHHHHcccC
Confidence 77765 9999999999999999999999 8888 69999999999999998 77
Q ss_pred cHH-------HHHHHHHcCCCc
Q 038957 149 FIK-------LYKSLHARGTGV 163 (169)
Q Consensus 149 ~~~-------~~~~Ll~~g~~~ 163 (169)
+.+ ++++|+++|+++
T Consensus 186 ~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 186 SPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHcCCCc
Confidence 888 999999999988
No 57
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.93 E-value=9.8e-25 Score=154.48 Aligned_cols=126 Identities=17% Similarity=0.157 Sum_probs=115.7
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhh-----hccCCCCCCcHHHHHHHh---CCHHHHHHHHHhcchhccccCCCCCCHH
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNI-----FSTMSPRGNIVLHMAIRF---QKHKVVQEILWRQLSLLRKNNWKGETAL 96 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~-----~~~~~~~g~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~g~tpl 96 (169)
..+|+.|+..|+++.+..++..+... ++..+..|.||||+|+.. ++.+++++|++.+.+ ++.+|..|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCHH
Confidence 35799999999999999999988753 233477899999999999 899999999999998 888999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 97 LIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 97 ~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
|+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKAS------------IEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCC------------CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999998 6999999999999999999999999999999874
No 58
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=5.4e-25 Score=159.07 Aligned_cols=146 Identities=14% Similarity=0.046 Sum_probs=118.4
Q ss_pred CCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCC---HHHHHHHHHhcchhccccCCCCCCH
Q 038957 19 ELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQK---HKVVQEILWRQLSLLRKNNWKGETA 95 (169)
Q Consensus 19 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~---~~~~~~ll~~~~~~~~~~~~~g~tp 95 (169)
.+..+. +|||+|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+ .++++.|++.+...++.+|..|+||
T Consensus 127 ~d~~g~-TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tp 204 (327)
T 1sw6_A 127 VDEHGN-TPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTI 204 (327)
T ss_dssp CSTTCC-CHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCH
T ss_pred cCCCCC-cHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCH
Confidence 344554 589999999999999999999865 67889999999999999998 6788888887643378899999999
Q ss_pred HHHHHH----cCCHHHHHHHHhcCC--------------------CCC----CCCCCCc---------cccccccCCCCC
Q 038957 96 LLIAAR----AGDPAIVSTLLNYVP--------------------AVK----NGTEAEP---------ESLLRMTEFEGN 138 (169)
Q Consensus 96 l~~a~~----~~~~~~v~~ll~~~~--------------------~~~----~~~~~~~---------~~~~~~~~~~~~ 138 (169)
||+|+. .|+.+++++|++.+. ++. .|..... ..+++.+|..|+
T Consensus 205 Lh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~ 284 (327)
T 1sw6_A 205 LHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGD 284 (327)
T ss_dssp HHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSC
T ss_pred HHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999 899999999998742 220 0110000 114788899999
Q ss_pred cHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 139 TSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 139 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
||||+|+..|+.+++++|+++|++++..
T Consensus 285 TpLh~A~~~g~~~~v~~Ll~~Gad~~~~ 312 (327)
T 1sw6_A 285 TCLNIAARLGNISIVDALLDYGADPFIA 312 (327)
T ss_dssp CHHHHHHHHCCHHHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 9999999999999999999999998764
No 59
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=5.1e-24 Score=147.17 Aligned_cols=144 Identities=16% Similarity=0.134 Sum_probs=108.6
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHH---hhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVR---MQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETAL 96 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~---~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl 96 (169)
+..+. +|||.|+..|+.+++++|++. ....++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.|||
T Consensus 6 d~~g~-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l 83 (241)
T 1k1a_A 6 DEDGD-TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDRHGQTAA 83 (241)
T ss_dssp -CTTC-CHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CCCCC-cHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHH
Confidence 34444 589999999999999999973 3334677888999999999999999999999999988 778899999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCC----CC----CCCCCCc-----------------cccccccC-CCCCcHHHHHHhhCcH
Q 038957 97 LIAARAGDPAIVSTLLNYVPA----VK----NGTEAEP-----------------ESLLRMTE-FEGNTSLHNGVGEYFI 150 (169)
Q Consensus 97 ~~a~~~~~~~~v~~ll~~~~~----~~----~~~~~~~-----------------~~~~~~~~-~~~~t~l~~A~~~~~~ 150 (169)
|+|+..++.+++++|++.++. .. .|..... +.+++..+ ..|.||||+|+..++.
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL 163 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCH
Confidence 999999999999999999873 21 1111110 33344444 5566666666666666
Q ss_pred HHHHHHHHcCCCccc
Q 038957 151 KLYKSLHARGTGVFS 165 (169)
Q Consensus 151 ~~~~~Ll~~g~~~~~ 165 (169)
+++++|+++|++++.
T Consensus 164 ~~v~~Ll~~g~~~~~ 178 (241)
T 1k1a_A 164 SMVQLLLQHGANVNA 178 (241)
T ss_dssp HHHHHHHHTTCCTTC
T ss_pred HHHHHHHHcCCCCCC
Confidence 666666666666543
No 60
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=4.2e-25 Score=138.24 Aligned_cols=114 Identities=18% Similarity=0.200 Sum_probs=103.6
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|+||||+|+..++
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVYEGH 85 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHHTC
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCC
Confidence 4789999999999999999998865 678888999999999999999999999999888 78899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHH
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKL 152 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~ 152 (169)
.+++++|++.+++ ++.+|..|.||+|+|...+..++
T Consensus 86 ~~~v~~Ll~~ga~------------~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 86 VSCVKLLLSKGAD------------KTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp HHHHHHHHHTTCC------------TTCCCTTSCCHHHHCCCHHHHHH
T ss_pred HHHHHHHHHcCCC------------CCCcCCCCCCHHHHhCCHHHHHH
Confidence 9999999999988 68999999999999965544443
No 61
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=3.7e-24 Score=147.69 Aligned_cols=126 Identities=17% Similarity=0.152 Sum_probs=66.9
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.++..++..+..|.||||+|+..++.+
T Consensus 47 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 125 (237)
T 3b7b_A 47 PLMEAAENNHLEAVKYLIKAGAL-VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVD 125 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCC-CCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHH
Confidence 34444444444444444444322 23334444444444444444444444444442223344444444444444444444
Q ss_pred HHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 107 IVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 107 ~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
++++|++.+++ ++.++..|.||||+|+..|+.+++++|+++|++++.
T Consensus 126 ~~~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 172 (237)
T 3b7b_A 126 LVKLLLSKGSD------------INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHA 172 (237)
T ss_dssp HHHHHHHTTCC------------TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTC
T ss_pred HHHHHHHCCCC------------CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC
Confidence 44444444444 566677777777777777777777777777777654
No 62
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.92 E-value=8.3e-25 Score=166.10 Aligned_cols=126 Identities=21% Similarity=0.198 Sum_probs=114.3
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccC------CCCCCcHHHHHHH---hCCHHHHHHHHHhcchhccccCCCCCCHH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTM------SPRGNIVLHMAIR---FQKHKVVQEILWRQLSLLRKNNWKGETAL 96 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~------~~~g~~~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~g~tpl 96 (169)
..||.|+..|+.+.++.|+..+.. ++.. +..|.||||+|+. .|+.+++++|++.+.+ ++.+|..|+|||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~TpL 211 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSCCHH
T ss_pred HHHHHHHhccCHHHHHHHHhhccc-ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCCcHH
Confidence 579999999999999999999865 4433 7789999999977 8999999999999998 889999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 97 LIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 97 ~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
|+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRAL------------VGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCC------------CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHHcCCHHHHHHHHHcCCC------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 999999999999999999999 699999999999999999999999999999999865
No 63
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.92 E-value=1e-24 Score=130.04 Aligned_cols=93 Identities=27% Similarity=0.325 Sum_probs=87.0
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCC
Q 038957 57 RGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFE 136 (169)
Q Consensus 57 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 136 (169)
+|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------~~~~d~~ 67 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------VNAKDKN 67 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------TTCCCTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------CCccCCC
Confidence 478999999999999999999999988 788999999999999999999999999999988 6899999
Q ss_pred CCcHHHHHHhhCcHHHHHHHHHcCCC
Q 038957 137 GNTSLHNGVGEYFIKLYKSLHARGTG 162 (169)
Q Consensus 137 ~~t~l~~A~~~~~~~~~~~Ll~~g~~ 162 (169)
|.||||+|+..++.+++++|+++|++
T Consensus 68 g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 68 GRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999985
No 64
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.92 E-value=3.4e-24 Score=155.26 Aligned_cols=97 Identities=16% Similarity=0.059 Sum_probs=87.3
Q ss_pred CCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHH
Q 038957 19 ELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLI 98 (169)
Q Consensus 19 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~ 98 (169)
.+..+. +|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+
T Consensus 54 ~d~~g~-t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~ 130 (351)
T 3utm_A 54 SDGRKS-TPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPLHE 130 (351)
T ss_dssp SSTTCC-CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred CCCCCC-CHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHH
Confidence 344444 589999999999999999999865 677889999999999999999999999999888 78889999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCC
Q 038957 99 AARAGDPAIVSTLLNYVPAV 118 (169)
Q Consensus 99 a~~~~~~~~v~~ll~~~~~~ 118 (169)
|+..|+.+++++|++.++++
T Consensus 131 A~~~~~~~~v~~Ll~~g~~~ 150 (351)
T 3utm_A 131 AASKNRVEVCSLLLSHGADP 150 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999998775
No 65
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=1.7e-25 Score=153.37 Aligned_cols=127 Identities=19% Similarity=0.168 Sum_probs=108.9
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHh-cchhccccCCCCCCHHHHHHHcC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWR-QLSLLRKNNWKGETALLIAARAG 103 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~g~tpl~~a~~~~ 103 (169)
.++||.|+..|+.++++.|++.+.. ++..+..|.||||+|+..|+.+++++|+.. +.+ ++.+|..|+||||+|+..|
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCHHHHHHHHT
T ss_pred ccccccccccCcHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCHHHHHHHcC
Confidence 4589999999999999999998855 677889999999999999999999999998 666 8889999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 104 DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
+.+++++|++.|++ ++.+|..|.||||+|+..++.++++.|++.|+....
T Consensus 152 ~~~~v~~Ll~~ga~------------~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 152 YADIVQLLLAKGAR------------TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp CHHHHHHHHHHTCC------------SCCCCTTSCCHHHHCCSHHHHHHHC-----------
T ss_pred CHHHHHHHHHcCCC------------CccccCCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence 99999999999998 689999999999999999999999999999987643
No 66
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.92 E-value=1.3e-24 Score=157.38 Aligned_cols=128 Identities=19% Similarity=0.227 Sum_probs=119.3
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++|+.|++.|+.+.++.++......++..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~ 103 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHNACSYGH 103 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTC
T ss_pred chhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHCCC
Confidence 46899999999999999999876555678889999999999999999999999999988 78899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 104 ~~iv~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 152 (351)
T 3utm_A 104 YEVTELLLKHGAC------------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTL 152 (351)
T ss_dssp HHHHHHHHHTTCC------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHCCCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 9999999999988 688999999999999999999999999999999764
No 67
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=3.3e-24 Score=151.10 Aligned_cols=129 Identities=22% Similarity=0.251 Sum_probs=118.2
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++|+.|+..|+++++++|++.++.+....+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..|+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 84 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAAIAGS 84 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTC
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCC
Confidence 47899999999999999999998763333477899999999999999999999999888 77889999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
.+++++|++.+++ ++..+..|.||||+|+..++.+++++|+++|++++..
T Consensus 85 ~~~v~~Ll~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 134 (285)
T 1wdy_A 85 VKLLKLFLSKGAD------------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLR 134 (285)
T ss_dssp HHHHHHHHHTTCC------------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHcCCC------------CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccc
Confidence 9999999999988 6888999999999999999999999999999998653
No 68
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=3.5e-25 Score=153.50 Aligned_cols=127 Identities=21% Similarity=0.159 Sum_probs=91.6
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.+|||.|+..++.+.++.|++.+..+ + .+..+.|+||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~-~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~ 82 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRV-K-FNPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALHNAVCAGH 82 (239)
T ss_dssp ---------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHHHHHHHHTC
T ss_pred cccCchhhhhhhHHHHHHHhccCCCc-c-cCchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCC
Confidence 46899999999999999999998653 2 356789999999999999999999999887 88899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 83 ~~~v~~Ll~~ga~------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 132 (239)
T 1ycs_B 83 TEIVKFLVQFGVN------------VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAM 132 (239)
T ss_dssp HHHHHHHHHHTCC------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHcCCC------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccee
Confidence 9999999999988 6999999999999999999999999999999998754
No 69
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=3.7e-24 Score=159.84 Aligned_cols=127 Identities=17% Similarity=0.149 Sum_probs=98.3
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
+|||.|+..|+.+++++|++.+.. .+..+..|.||||+|+..|+.+++++|++.+.. ++.++..|.||||+|+..|+.
T Consensus 247 t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~ 324 (437)
T 1n11_A 247 TPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNI 324 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCS
T ss_pred CHHHHHHHCCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc-CCCCCCCCCCHHHHHHHcCcH
Confidence 367777777777777777766543 455666777777777777777777777777666 666777777888888777777
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 106 AIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 106 ~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 325 ~~v~~Ll~~gad------------~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~ 373 (437)
T 1n11_A 325 KLVKFLLQHQAD------------VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEV 373 (437)
T ss_dssp HHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred HHHHHHHhcCCC------------CCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCC
Confidence 888888777777 6888999999999999999999999999999998654
No 70
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.92 E-value=1.6e-24 Score=153.82 Aligned_cols=130 Identities=16% Similarity=0.093 Sum_probs=101.1
Q ss_pred CCCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHH
Q 038957 17 DQELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETAL 96 (169)
Q Consensus 17 ~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl 96 (169)
+..+..+. +|||+|+..|+.+++++|++.+.. ++.. +|.||||+|+..|+.+++++|++.+.+ ++.++..|.|||
T Consensus 25 ~~~d~~g~-t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~L 99 (285)
T 3kea_A 25 FKADVHGH-SASYYAIADNNVRLVCTLLNAGAL-KNLL--ENEFPLHQAATLEDTKIVKILLFSGLD-DSQFDDKGNTAL 99 (285)
T ss_dssp TCCCTTSC-CHHHHHHHTTCHHHHHHHHHTTGG-GSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CccCCCCC-CHHHHHHHcCCHHHHHHHHhCCCC-CCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHH
Confidence 33444454 479999999999999999988754 3333 488889998888888888888888887 677888888888
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCC-CcHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 97 LIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEG-NTSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 97 ~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~-~t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
|+|+..|+.+++++|++.+++ ++.++..| .||||+|+..|+.+++++|+++|++.
T Consensus 100 ~~A~~~g~~~~v~~Ll~~ga~------------~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 100 YYAVDSGNMQTVKLFVKKNWR------------LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HHHHHTTCHHHHHHHHHHCGG------------GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred HHHHHcCCHHHHHHHHhcCCC------------CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 888888888888888888777 46666666 57777777777777777777777665
No 71
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.92 E-value=5.3e-24 Score=151.57 Aligned_cols=112 Identities=20% Similarity=0.133 Sum_probs=91.3
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC----CCCCCc---
Q 038957 54 MSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKN----GTEAEP--- 126 (169)
Q Consensus 54 ~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~----~~~~~~--- 126 (169)
.+..+.|+||.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.|+++.. |.....
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAA 114 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 345678999999999999999999999988 788999999999999999999999999999988732 111111
Q ss_pred --------------cccccc------------------------------------------------------------
Q 038957 127 --------------ESLLRM------------------------------------------------------------ 132 (169)
Q Consensus 127 --------------~~~~~~------------------------------------------------------------ 132 (169)
+.+++.
T Consensus 115 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR 194 (299)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred HcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhh
Confidence 111111
Q ss_pred cCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 133 TEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 133 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
.+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~ 228 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIK 228 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCc
Confidence 2356889999999999999999999999998754
No 72
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=4.8e-24 Score=159.23 Aligned_cols=137 Identities=20% Similarity=0.117 Sum_probs=83.3
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..|+.+
T Consensus 17 ~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~ 94 (437)
T 1n11_A 17 PLHVASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK-VNAKAKDDQTPLHCAARIGHTN 94 (437)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-SCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHH
Confidence 57777777777777776666543 445566666677777777777777777666665 5556666667777777667777
Q ss_pred HHHHHHhcCCCCCC----CCCCCc-----------------cccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 107 IVSTLLNYVPAVKN----GTEAEP-----------------ESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 107 ~v~~ll~~~~~~~~----~~~~~~-----------------~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
++++|++.++++.. |..... +.+....+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 95 ~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 174 (437)
T 1n11_A 95 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA 174 (437)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 77776666665310 000000 111344555666666666666666666666666666543
No 73
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=5e-24 Score=150.20 Aligned_cols=129 Identities=18% Similarity=0.193 Sum_probs=118.6
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCC----HHHHHHHHHhcchhccccCCCCCCHHHHHH
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQK----HKVVQEILWRQLSLLRKNNWKGETALLIAA 100 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~ 100 (169)
.+|||.|+..|+.+++++|++.....++..+..|.||||+|+..++ .+++++|++.+.+ ++.++..|.||||+|+
T Consensus 149 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~-~~~~~~~g~t~L~~A~ 227 (285)
T 1wdy_A 149 ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAV 227 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-SSCCCTTSCCHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC-CCCcCCCCCcHHHHHH
Confidence 3589999999999999999998334467888999999999999999 8999999999988 7889999999999999
Q ss_pred HcCCHHHHHHHHh-cCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 101 RAGDPAIVSTLLN-YVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 101 ~~~~~~~v~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
..|+.+++++|++ .+++ ++.+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 228 ~~~~~~~v~~Ll~~~g~~------------~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~ 282 (285)
T 1wdy_A 228 EKKHLGLVQRLLEQEHIE------------INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282 (285)
T ss_dssp HTTCHHHHHHHHHSSSCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCS
T ss_pred HcCCHHHHHHHHhccCCC------------ccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcc
Confidence 9999999999999 6776 6899999999999999999999999999999998764
No 74
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=1.2e-24 Score=159.07 Aligned_cols=126 Identities=15% Similarity=0.075 Sum_probs=116.5
Q ss_pred cHHHHHHHHcc--CHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchh----ccccCCCCCCHHHH
Q 038957 25 DHELLNVLRRE--DEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSL----LRKNNWKGETALLI 98 (169)
Q Consensus 25 ~~~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~----~~~~~~~g~tpl~~ 98 (169)
.+|||.|+..| +.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+. ++..|..|.||||+
T Consensus 139 ~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~ 217 (364)
T 3ljn_A 139 QTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHW 217 (364)
T ss_dssp CCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHH
T ss_pred CCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHH
Confidence 35899999999 99999999999865 6788999999999999999999999999987652 56789999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 99 AARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 99 a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 218 A~~~g~~~~v~~Ll~~gad------------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 218 AILINWEDVAMRFVEMGID------------VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp HHTTTCHHHHHHHHTTTCC------------TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred HHHcCCHHHHHHHHHcCCC------------CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 9999999999999999998 6999999999999999999999999999998775
No 75
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.92 E-value=2.5e-24 Score=151.73 Aligned_cols=102 Identities=20% Similarity=0.219 Sum_probs=85.7
Q ss_pred ccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCcccccc
Q 038957 52 STMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLR 131 (169)
Q Consensus 52 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 131 (169)
+..|..|+||||+|+..|+.+++++|+..+++ +..++..|.||+++|+..++.+++++|++.+++ ++
T Consensus 80 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~------------~n 146 (269)
T 4b93_B 80 NVTSQDGSSPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAK------------PN 146 (269)
T ss_dssp TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------------SC
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCCCC------------CC
Confidence 44566778888888888888888888887777 667777888888888888888888888888777 68
Q ss_pred ccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 132 MTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 132 ~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 147 ~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~ 181 (269)
T 4b93_B 147 KKDLSGNTPLIYACSGGHHELVALLLQHGASINAS 181 (269)
T ss_dssp CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCB
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCcc
Confidence 89999999999999999999999999999998754
No 76
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=2.4e-24 Score=154.05 Aligned_cols=125 Identities=20% Similarity=0.188 Sum_probs=115.0
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhcc------CCCCCCcHHHHHHHh---CCHHHHHHHHHhcchhccccCCCCCCH
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFST------MSPRGNIVLHMAIRF---QKHKVVQEILWRQLSLLRKNNWKGETA 95 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~------~~~~g~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~g~tp 95 (169)
..+|+.|+..|+++.++.|+..+.. ++. .+..|.||||+|+.. ++.+++++|++.+.+ ++.+|..|+||
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G~Tp 229 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTA 229 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCC-TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTCCCH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCc-ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCCCCH
Confidence 3579999999999999999988865 333 578899999999997 899999999999988 78899999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 96 LLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 96 l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|+++|++.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad------------~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRAL------------VGTVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC------------CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCC------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 9999999999999999999998 6999999999999999999999999999998764
No 77
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=5.7e-24 Score=141.77 Aligned_cols=120 Identities=19% Similarity=0.206 Sum_probs=106.3
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccC-CCCCCHHHHHHHcC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNN-WKGETALLIAARAG 103 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~g~tpl~~a~~~~ 103 (169)
.+|||.|+..|+.++++.|+. +. .++..+..|.||||+|+..|+.+++++|++.+.+ ++.++ ..|+||||+|+..|
T Consensus 45 ~t~L~~A~~~g~~~~v~~Ll~-~~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 45 ETPWWTAARKADEQALSQLLE-DR-DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT-TS-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHh-cC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHhcC
Confidence 578999999999999999999 54 4678899999999999999999999999999988 66666 89999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhh----------------CcHHHHHHHHHc
Q 038957 104 DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGE----------------YFIKLYKSLHAR 159 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~----------------~~~~~~~~Ll~~ 159 (169)
+.+++++|++.|++ ++.+|..|.||||+|+.. |+.+++++|.++
T Consensus 122 ~~~~v~~Ll~~ga~------------~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 122 RPEVVEALVELGAD------------IEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CHHHHHHHHHHTCC------------TTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHcCCC------------CcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 99999999999988 588899999999988776 556777776654
No 78
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=9.8e-24 Score=154.95 Aligned_cols=146 Identities=17% Similarity=0.088 Sum_probs=113.5
Q ss_pred CCCCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhc---chhccccCCCCCC
Q 038957 18 QELPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQ---LSLLRKNNWKGET 94 (169)
Q Consensus 18 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~---~~~~~~~~~~g~t 94 (169)
..+..+. +|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|+..+ .+ ++..+..|.|
T Consensus 161 ~~d~~g~-TpL~~A~~~g~~~iv~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~d~~g~t 237 (373)
T 2fo1_E 161 AMDCDEN-TPLMLAVLARRRRLVAYLMKAGAD-PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD-IEELDRNGMT 237 (373)
T ss_dssp CCCTTSC-CHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT-TSCCCTTSCC
T ss_pred CCCCCCC-CHHHHHHHcChHHHHHHHHHCCCC-CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC-hhhcCCCCCC
Confidence 3344454 479999999999999999988754 5677778888888888888888888888766 34 6667778888
Q ss_pred HHHHHHHcC---CHHHHHHHHhcCCCCCC------------CCCCCc------------------cccccccCCCCCcHH
Q 038957 95 ALLIAARAG---DPAIVSTLLNYVPAVKN------------GTEAEP------------------ESLLRMTEFEGNTSL 141 (169)
Q Consensus 95 pl~~a~~~~---~~~~v~~ll~~~~~~~~------------~~~~~~------------------~~~~~~~~~~~~t~l 141 (169)
|||+|+..+ +.+++++|++.+++... |..... +.+++.+|..|.|||
T Consensus 238 ~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL 317 (373)
T 2fo1_E 238 ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI 317 (373)
T ss_dssp HHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred HHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHH
Confidence 888888877 77888888888776531 222111 256788899999999
Q ss_pred HHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 142 HNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 142 ~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
|+|+..|+.+++++|+++|++++..
T Consensus 318 ~~A~~~g~~~iv~~Ll~~gad~~~~ 342 (373)
T 2fo1_E 318 MLAAQEGRIEVVMYLIQQGASVEAV 342 (373)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCccCC
Confidence 9999999999999999999998653
No 79
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.91 E-value=1.6e-24 Score=153.82 Aligned_cols=140 Identities=16% Similarity=0.155 Sum_probs=105.9
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCC-CCHHHHHHHcC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKG-ETALLIAARAG 103 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g-~tpl~~a~~~~ 103 (169)
.+|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.+ ++.++..| .||||+|+..|
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~ 140 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLN 140 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcC
Confidence 3478888888888888888887754 566777788888888888888888888887777 66777777 68888888888
Q ss_pred CHHHHHHHHhcCCCCCCC---CCCCc-----------------cccccccCCCCCcH-HHHHHhhCcHHHHHHHHHcCCC
Q 038957 104 DPAIVSTLLNYVPAVKNG---TEAEP-----------------ESLLRMTEFEGNTS-LHNGVGEYFIKLYKSLHARGTG 162 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~---~~~~~-----------------~~~~~~~~~~~~t~-l~~A~~~~~~~~~~~Ll~~g~~ 162 (169)
+.+++++|++.++..... ..... +.+++.+|..|.|| ||+|+..++.+++++|+++|++
T Consensus 141 ~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad 220 (285)
T 3kea_A 141 DVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN 220 (285)
T ss_dssp CHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC
T ss_pred CHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Confidence 888888888877665221 00000 34567888888887 9999999999999999999988
Q ss_pred cccc
Q 038957 163 VFSK 166 (169)
Q Consensus 163 ~~~~ 166 (169)
++..
T Consensus 221 ~~~~ 224 (285)
T 3kea_A 221 IYSA 224 (285)
T ss_dssp STTT
T ss_pred CCCC
Confidence 8754
No 80
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.91 E-value=2.1e-23 Score=148.08 Aligned_cols=124 Identities=18% Similarity=0.070 Sum_probs=79.1
Q ss_pred HHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHH
Q 038957 27 ELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPA 106 (169)
Q Consensus 27 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 106 (169)
|||.|+..|+.+++++|++.+.. ++ .+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+
T Consensus 128 ~L~~A~~~~~~~~v~~Ll~~g~~-~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~ 204 (285)
T 3d9h_A 128 PLFNACVSGSWDCVNLLLQHGAS-VQ-PESDLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRA 204 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-SS-CSCTTSCHHHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHH
T ss_pred HHHHHHHcCHHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHH
Confidence 45555555555555555544432 11 122355555555555555555555555554 4555556666666666666666
Q ss_pred HHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 107 IVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 107 ~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
++++|++.+++ ++ .+..|.||||+|+..++.+++++|+++|++++..
T Consensus 205 ~v~~Ll~~ga~------------~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~ 251 (285)
T 3d9h_A 205 CVKKLLESGAD------------VN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAK 251 (285)
T ss_dssp HHHHHHHTTCC------------TT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHCCCC------------CC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 66666666555 45 4788999999999999999999999999998754
No 81
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=2.7e-24 Score=149.56 Aligned_cols=123 Identities=19% Similarity=0.184 Sum_probs=110.1
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccC-CCCCCHHHHHHHcC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNN-WKGETALLIAARAG 103 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~g~tpl~~a~~~~ 103 (169)
.+|||.|+..|+.++++.|+. +. .++..+..|.||||+|+..|+.+++++|++.+.+ ++.++ ..|.||||+|+..|
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~-~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 46 ETPWWTAARKADEQALSQLLE-DR-DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHHHHHHTTTCHHHHHHTTT-TC-CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHc-CC-CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHHcC
Confidence 578999999999999999999 54 4678899999999999999999999999999988 66666 88999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHH----------------hhCcHHHHHHHHHcCCC
Q 038957 104 DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGV----------------GEYFIKLYKSLHARGTG 162 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~----------------~~~~~~~~~~Ll~~g~~ 162 (169)
+.+++++|++.|++ ++.+|..|.||||+|+ ..|+.+++++|++++.+
T Consensus 123 ~~~~v~~Ll~~ga~------------~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 123 RPEVVEALVELGAD------------IEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp CHHHHHHHHHTTCC------------TTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHHHHHHCCCC------------CCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 99999999999988 5788888888888887 67889999999987544
No 82
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.91 E-value=8.1e-24 Score=149.59 Aligned_cols=129 Identities=20% Similarity=0.218 Sum_probs=115.5
Q ss_pred CCCCCCcccHHHHHHH-----HccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCC
Q 038957 17 DQELPTTMDHELLNVL-----RREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWK 91 (169)
Q Consensus 17 ~~~~~~~~~~~l~~a~-----~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 91 (169)
+..+..+. +|||.|+ ..++.++++.|+..+. ..+..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..
T Consensus 139 ~~~~~~g~-tpL~~a~~~~~~~~~~~~~v~~Ll~~g~-~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~ 215 (276)
T 4hbd_A 139 DKQNRAGY-SPIMLTALATLKTQDDIETVLQLFRLGN-INAKASQAGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDD 215 (276)
T ss_dssp TCCCTTSC-CHHHHGGGCCCCSHHHHHHHHHHHHHSC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred CCCCCCCC-CHHHHHHHHHhhhhhhHHHHHHHHHcCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCC
Confidence 33344454 5899999 7799999999999984 3567788899999999999999999999999998 8889999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcC
Q 038957 92 GETALLIAARAGDPAIVSTLLN-YVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARG 160 (169)
Q Consensus 92 g~tpl~~a~~~~~~~~v~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g 160 (169)
|+||||+|+..|+.+++++|++ .+++ ++.+|..|.||||+|+..|+.+++++|++++
T Consensus 216 G~TpLh~A~~~g~~~iv~~Ll~~~gad------------~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 216 GSTALMCACEHGHKEIAGLLLAVPSCD------------ISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHTSTTCC------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCHHHHHHHCCCHHHHHHHHhcCCCC------------CcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999999999999999999999 7777 6999999999999999999999999999865
No 83
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=2.2e-24 Score=150.86 Aligned_cols=127 Identities=26% Similarity=0.305 Sum_probs=111.6
Q ss_pred cHHHHHHH---HccCHHHHHHHHHHhhhh----------hccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccC--
Q 038957 25 DHELLNVL---RREDEHQIRLLAVRMQNI----------FSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNN-- 89 (169)
Q Consensus 25 ~~~l~~a~---~~g~~~~~~~ll~~~~~~----------~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-- 89 (169)
.+|||.|+ ..|+.+++++|++.+... ....+..|.||||+|+..|+.+++++|++.+.+ ++..+
T Consensus 47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~ 125 (260)
T 3jxi_A 47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARG 125 (260)
T ss_dssp CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEE
T ss_pred CcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccc
Confidence 45899999 779999999999987531 123344799999999999999999999999988 67677
Q ss_pred ------------CCCCCHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCc-----
Q 038957 90 ------------WKGETALLIAARAGDPAIVSTLLN---YVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYF----- 149 (169)
Q Consensus 90 ------------~~g~tpl~~a~~~~~~~~v~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~----- 149 (169)
..|.||||+|+..|+.+++++|++ .+++ ++.+|..|+||||+|+..++
T Consensus 126 ~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~------------~~~~d~~g~TpLh~A~~~~~~~~~~ 193 (260)
T 3jxi_A 126 RFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD------------LRRQDSRGNTVLHALVAIADNTREN 193 (260)
T ss_dssp CCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------------TTCCCTTSCCHHHHHHHHCCSSHHH
T ss_pred cccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------------CcccCCCCCcHHHHHHHhccCchhH
Confidence 689999999999999999999999 7777 69999999999999998877
Q ss_pred ----HHHHHHHHHcCCCcc
Q 038957 150 ----IKLYKSLHARGTGVF 164 (169)
Q Consensus 150 ----~~~~~~Ll~~g~~~~ 164 (169)
.+++++|+++|++++
T Consensus 194 ~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 194 TKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcccc
Confidence 799999999999874
No 84
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=7.8e-23 Score=140.85 Aligned_cols=145 Identities=16% Similarity=0.074 Sum_probs=118.5
Q ss_pred CCCcccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHH
Q 038957 20 LPTTMDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIA 99 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a 99 (169)
+..+. +|||.|+..|+.+++++|++.++......+..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||+|
T Consensus 39 ~~~g~-t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A 116 (240)
T 3eu9_A 39 DKENV-TLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLA 116 (240)
T ss_dssp CTTSC-CHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred CCCCC-CHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHH
Confidence 33443 5899999999999999999998765555566689999999999999999999998887 777889999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCC----CCC-----------c-------cccccccCC-CCCcHHHHHHhhCcHHHHHHH
Q 038957 100 ARAGDPAIVSTLLNYVPAVKNGT----EAE-----------P-------ESLLRMTEF-EGNTSLHNGVGEYFIKLYKSL 156 (169)
Q Consensus 100 ~~~~~~~~v~~ll~~~~~~~~~~----~~~-----------~-------~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~L 156 (169)
+..|+.+++++|++.+++....+ ... . +.+++..+. .|.||||+|+..++.+++++|
T Consensus 117 ~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 196 (240)
T 3eu9_A 117 AQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLL 196 (240)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHH
Confidence 99999999999999987762211 111 1 445666665 899999999999999999999
Q ss_pred HHcCCCcccc
Q 038957 157 HARGTGVFSK 166 (169)
Q Consensus 157 l~~g~~~~~~ 166 (169)
+++|++++..
T Consensus 197 l~~g~~~~~~ 206 (240)
T 3eu9_A 197 LEAGANVDAQ 206 (240)
T ss_dssp HHHTCCTTCB
T ss_pred HHcCCCCCCc
Confidence 9999998654
No 85
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=2.7e-23 Score=150.46 Aligned_cols=128 Identities=18% Similarity=0.200 Sum_probs=86.5
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCC----HHHHHHHHHhcchhccccCCCCCCHHHHHH
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQK----HKVVQEILWRQLSLLRKNNWKGETALLIAA 100 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~ 100 (169)
.+|||.|+..|+.+++++||.+....++..+..|.+++++++..+. ..++++|++.+.+ ++.+|..|+||||+|+
T Consensus 169 ~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t~L~~a~ 247 (337)
T 4g8k_A 169 ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAV 247 (337)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCCHHHHHH
T ss_pred CcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHH
Confidence 3589999999999999999976433355666666677666655443 3456666666666 5666666777777777
Q ss_pred HcCCHHHHHHHHhc-CCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 101 RAGDPAIVSTLLNY-VPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 101 ~~~~~~~v~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
..|+.++++.|+.. +.+ ++.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 248 ~~~~~~~v~~Ll~~~~~~------------vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 248 EKKHLGLVQRLLEQEHIE------------INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp HTTCHHHHHHHHTSTTCC------------TTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT
T ss_pred HhhhhHHHHHHHHhcCCc------------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 77777777666654 333 566666677777777776777777777776666653
No 86
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=2e-23 Score=143.80 Aligned_cols=129 Identities=16% Similarity=0.114 Sum_probs=116.4
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++|+.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++.+.......+..|.||||+|+..|+
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC
T ss_pred chHHHHHHHcCChHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC
Confidence 3579999999999999999999855 677888999999999999999999999999988555666679999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
.+++++|++.+++ ++.++..|.||||+|+..++.+++++|+++|++++..
T Consensus 89 ~~~v~~Ll~~g~~------------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~ 138 (240)
T 3eu9_A 89 LSMVVQLMKYGAD------------PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMM 138 (240)
T ss_dssp HHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHcCCC------------CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcccc
Confidence 9999999999888 5888899999999999999999999999999987653
No 87
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.91 E-value=5.8e-24 Score=155.42 Aligned_cols=133 Identities=14% Similarity=0.150 Sum_probs=108.7
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhh---hhcc-----------------CCCCCCcHHHHHHHhC--CHHHHHHHHHhcch
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQN---IFST-----------------MSPRGNIVLHMAIRFQ--KHKVVQEILWRQLS 83 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~---~~~~-----------------~~~~g~~~l~~a~~~~--~~~~~~~ll~~~~~ 83 (169)
+|||.|+..|+.+++++|++.+.. .++. .+..|.||||+|+..| +.+++++|++.+.+
T Consensus 86 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~ 165 (364)
T 3ljn_A 86 KPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS 165 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC
Confidence 356666666666666666655211 0111 6667999999999999 99999999999988
Q ss_pred hccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 84 LLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 84 ~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
++.+|..|.||||+|+..|+.+++++|++.+++. ...+++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 166 -~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-------~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 237 (364)
T 3ljn_A 166 -PTAKDKADETPLMRAMEFRNREALDLMMDTVPSK-------SSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDV 237 (364)
T ss_dssp -TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCS-------SSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT
T ss_pred -CcccCCCCCCHHHHHHHcCCHHHHHHHHhccccc-------ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 7889999999999999999999999999998771 01125788999999999999999999999999999998
Q ss_pred ccc
Q 038957 164 FSK 166 (169)
Q Consensus 164 ~~~ 166 (169)
+..
T Consensus 238 ~~~ 240 (364)
T 3ljn_A 238 NME 240 (364)
T ss_dssp TCC
T ss_pred CCC
Confidence 754
No 88
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=1.5e-23 Score=153.41 Aligned_cols=124 Identities=11% Similarity=0.038 Sum_probs=114.2
Q ss_pred cHHHHHHHHc-cCHHHHHHHHHHhhhhhccCC--CCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHH
Q 038957 25 DHELLNVLRR-EDEHQIRLLAVRMQNIFSTMS--PRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAAR 101 (169)
Q Consensus 25 ~~~l~~a~~~-g~~~~~~~ll~~~~~~~~~~~--~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~ 101 (169)
.++||.|+.. |++++++.|+..+.. ++..+ ..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+.
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gad-vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGAD-VNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPLHHATI 277 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCC-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCC-CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHH
Confidence 3589999999 999999999999865 55566 7899999999999999999999999988 78899999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCC
Q 038957 102 AGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTG 162 (169)
Q Consensus 102 ~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~ 162 (169)
.|+.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|+.++..
T Consensus 278 ~g~~~~v~~LL~~Gad------------~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 278 LGHTGLACLFLKRGAD------------LGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HTCHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred cCcHHHHHHHHHCcCC------------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9999999999999998 699999999999999999999999999987644
No 89
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=1.7e-24 Score=144.82 Aligned_cols=125 Identities=10% Similarity=-0.036 Sum_probs=95.1
Q ss_pred cHHHHHHHHccCH----HHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCC------HHHHHHHHHhcchhccccCCCCC-
Q 038957 25 DHELLNVLRREDE----HQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQK------HKVVQEILWRQLSLLRKNNWKGE- 93 (169)
Q Consensus 25 ~~~l~~a~~~g~~----~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~------~~~~~~ll~~~~~~~~~~~~~g~- 93 (169)
.+|||+|+..|+. +++++|++.+.. ++..+..|+||||+|+..++ .+++++|++.+.+ ++.+|..|.
T Consensus 39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~t 116 (186)
T 3t8k_A 39 SNILYDVLRNNNDEARYKISMFLINKGAD-IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKI 116 (186)
T ss_dssp TTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTB
T ss_pred CCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCc
Confidence 3578888888765 477888887754 66777788888888888776 5678888888877 777888888
Q ss_pred CHHHHHHHcC-----CHHHHHHHHh-cCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCc
Q 038957 94 TALLIAARAG-----DPAIVSTLLN-YVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGV 163 (169)
Q Consensus 94 tpl~~a~~~~-----~~~~v~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~ 163 (169)
||||+|+..+ ..+++++|++ .|++ ++.+|..|.||||+|+..++.+++++|.+...+.
T Consensus 117 tpLh~A~~~~~~~~~~~~iv~~Ll~~~gad------------~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~ 180 (186)
T 3t8k_A 117 VVFKNIFNYFVDENEMIPLYKLIFSQSGLQ------------LLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKY 180 (186)
T ss_dssp CTTGGGGGCCSCHHHHHHHHHHHHTSTTCC------------TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHcCCChhhHHHHHHHHHHhcCCC------------CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 8888887743 3467888887 7777 5888888888888888888888888888764433
No 90
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.90 E-value=5.2e-23 Score=151.12 Aligned_cols=130 Identities=16% Similarity=0.180 Sum_probs=108.4
Q ss_pred CCCcccHHHHHHHHcc---CHHHHHHHHHHhhhhh-------ccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccC
Q 038957 20 LPTTMDHELLNVLRRE---DEHQIRLLAVRMQNIF-------STMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNN 89 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~g---~~~~~~~ll~~~~~~~-------~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 89 (169)
+..+. +|||.|+..+ +.+++++|++.+..+. +..+..|.||||+|+..|+.+++++|++.+...++.+|
T Consensus 232 d~~g~-t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d 310 (373)
T 2fo1_E 232 DRNGM-TALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQD 310 (373)
T ss_dssp CTTSC-CHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCC
T ss_pred CCCCC-CHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcC
Confidence 33443 4788888887 7888888888875421 12566789999999999999999999988733378889
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCC
Q 038957 90 WKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTG 162 (169)
Q Consensus 90 ~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~ 162 (169)
..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+.+|+.+++++|++++++
T Consensus 311 ~~g~TpL~~A~~~g~~~iv~~Ll~~gad------------~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 311 EDGKTPIMLAAQEGRIEVVMYLIQQGAS------------VEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCC------------SSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC------------ccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 9999999999999999999999999888 699999999999999999999999999999986
No 91
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=6e-24 Score=142.15 Aligned_cols=126 Identities=12% Similarity=0.072 Sum_probs=110.4
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCC-CCCCcHHHHHHHhCCH----HHHHHHHHhcchhccccCCCCCCHHHHHH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMS-PRGNIVLHMAIRFQKH----KVVQEILWRQLSLLRKNNWKGETALLIAA 100 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~~g~~~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~g~tpl~~a~ 100 (169)
++|+.|++.|+.+.++.++..+. +..+ ..|.||||+|+..++. +++++|++.+++ ++.+|..|+||||+|+
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGY---EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD-IKSRTKEGTTLFFPLF 83 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSS---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCCTTCCCTHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCc---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCCCCCCcHHHHHH
Confidence 36999999999999999988763 3334 6699999999999975 589999999998 8899999999999999
Q ss_pred HcCC------HHHHHHHHhcCCCCCCCCCCCccccccccCCCCC-cHHHHHHhh-----CcHHHHHHHHH-cCCCccccc
Q 038957 101 RAGD------PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGN-TSLHNGVGE-----YFIKLYKSLHA-RGTGVFSKI 167 (169)
Q Consensus 101 ~~~~------~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~-t~l~~A~~~-----~~~~~~~~Ll~-~g~~~~~~~ 167 (169)
..++ .+++++|++.|++ ++.+|..|. ||||+|+.. +..+++++|++ +|++++...
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gad------------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d 151 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGAD------------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKD 151 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCC------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCC
T ss_pred HcCCcchhhHHHHHHHHHHCCCC------------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccC
Confidence 9987 5789999999999 699999999 999999994 44679999999 999997654
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=1.3e-22 Score=129.11 Aligned_cols=101 Identities=21% Similarity=0.230 Sum_probs=94.9
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccc
Q 038957 53 TMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRM 132 (169)
Q Consensus 53 ~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 132 (169)
..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|++.+++ ++.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------~~~ 71 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL------------VNT 71 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------TTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc------------ccC
Confidence 4678899999999999999999999999888 788999999999999999999999999999888 688
Q ss_pred cCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 133 TEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 133 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 105 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAV 105 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999999999998654
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=1.9e-22 Score=126.05 Aligned_cols=100 Identities=18% Similarity=0.133 Sum_probs=91.0
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCcccccccc
Q 038957 54 MSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMT 133 (169)
Q Consensus 54 ~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 133 (169)
.+..|.++||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..++.+++++|++.+++ ++.+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------~~~~ 69 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD------------INAP 69 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC------------TTCC
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------------CCcC
Confidence 345678999999999999999999999888 788999999999999999999999999999888 6899
Q ss_pred CCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 134 EFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 134 ~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
|..|+||||+|+..++.+++++|+++|++++..
T Consensus 70 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 102 (123)
T 3aaa_C 70 DKHHITPLLSAVYEGHVSCVKLLLSKGADKTVK 102 (123)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 999999999999999999999999999998654
No 94
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=4.7e-23 Score=127.35 Aligned_cols=101 Identities=27% Similarity=0.297 Sum_probs=93.6
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccc
Q 038957 53 TMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRM 132 (169)
Q Consensus 53 ~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~ 132 (169)
..|..|.|+||+|+..++.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|++.+++ ++.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------~~~ 70 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD------------VNA 70 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC------------TTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------------Ccc
Confidence 4678899999999999999999999999888 788899999999999999999999999999888 688
Q ss_pred cCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 133 TEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 133 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+|..|.||||+|+..++.+++++|+++|++++..
T Consensus 71 ~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~ 104 (115)
T 2l6b_A 71 RSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104 (115)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcC
Confidence 8999999999999999999999999999998754
No 95
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.88 E-value=1.5e-21 Score=141.35 Aligned_cols=128 Identities=22% Similarity=0.257 Sum_probs=117.8
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCC-CCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMS-PRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAG 103 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~ 103 (169)
+++|+.|++.|++++|++||+.+.. ++..+ ..|+||||+|+..|+.+++++|++.+.. ++.++..+.+|++.++..+
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gad-vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHT
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhhccCCCchhHHHHhcc
Confidence 5689999999999999999999876 45554 4599999999999999999999999998 7889999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 104 DPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 104 ~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
...++..++..+.+ ++.+|..|.||+|+|+..|+.+++++|+++|++++..
T Consensus 104 ~~~~~~~~~~~~~~------------~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~ 154 (337)
T 4g8k_A 104 SVKLLKLFLSKGAD------------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLR 154 (337)
T ss_dssp CHHHHHHHHTTTCC------------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cchhhHHhhhccch------------hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchh
Confidence 99999999999888 6899999999999999999999999999999998643
No 96
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=1.2e-22 Score=129.13 Aligned_cols=102 Identities=15% Similarity=0.116 Sum_probs=95.5
Q ss_pred hccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccc
Q 038957 51 FSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLL 130 (169)
Q Consensus 51 ~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~ 130 (169)
++..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+. ++.+++++|++.+++ +
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~------------~ 70 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE------------P 70 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC------------S
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC------------C
Confidence 467788999999999999999999999999888 78899999999999999 999999999999988 6
Q ss_pred cccCCC-CCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 131 RMTEFE-GNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 131 ~~~~~~-~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+.+|.. |.||||+|+..++.+++++|+++|++++..
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 107 (136)
T 1d9s_A 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVC 107 (136)
T ss_dssp SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCC
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence 889998 999999999999999999999999998754
No 97
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=1.1e-21 Score=124.63 Aligned_cols=100 Identities=20% Similarity=0.155 Sum_probs=92.1
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCcccccccc
Q 038957 54 MSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMT 133 (169)
Q Consensus 54 ~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 133 (169)
....+.|+||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|++.+++ ++.+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------~~~~ 76 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD------------VNAV 76 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------TTCC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------CCcC
Confidence 445678999999999999999999999888 788899999999999999999999999999888 6889
Q ss_pred CCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 134 EFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 134 ~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
|..|.||||+|+..++.+++++|+++|++++..
T Consensus 77 d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 109 (136)
T 2jab_A 77 DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQ 109 (136)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCc
Confidence 999999999999999999999999999998654
No 98
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.87 E-value=9.8e-22 Score=135.42 Aligned_cols=113 Identities=19% Similarity=0.120 Sum_probs=95.2
Q ss_pred HHHHHHhhhh--hccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Q 038957 41 RLLAVRMQNI--FSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAV 118 (169)
Q Consensus 41 ~~ll~~~~~~--~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~ 118 (169)
+.|+..+... .+..+..+.|+||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.|++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~- 79 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGAN- 79 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-
Confidence 4566666432 234456678899999999999999999999888 788999999999999999999999999999988
Q ss_pred CCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 119 KNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
++.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 80 -----------~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 116 (229)
T 2vge_A 80 -----------VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFAT 116 (229)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 6899999999999999999999999999999998764
No 99
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=3.1e-21 Score=114.86 Aligned_cols=90 Identities=24% Similarity=0.259 Sum_probs=84.3
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCH
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDP 105 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~ 105 (169)
+|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|+..|+.
T Consensus 4 t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 4 TPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCH
Confidence 589999999999999999999865 678899999999999999999999999999988 788999999999999999999
Q ss_pred HHHHHHHhcCCC
Q 038957 106 AIVSTLLNYVPA 117 (169)
Q Consensus 106 ~~v~~ll~~~~~ 117 (169)
+++++|++.|++
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999998763
No 100
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=7.8e-21 Score=118.64 Aligned_cols=97 Identities=28% Similarity=0.341 Sum_probs=91.0
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCC
Q 038957 57 RGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFE 136 (169)
Q Consensus 57 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 136 (169)
+|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++.+++ ++.++..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------~~~~~~~ 67 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------VNAKDKN 67 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------TTCCCTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC------------CcccCCC
Confidence 488999999999999999999999887 778899999999999999999999999999888 6888999
Q ss_pred CCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 137 GNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 137 ~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
|.||||+|+..++.+++++|+++|++++..
T Consensus 68 g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 97 (126)
T 1n0r_A 68 GRTPLHLAARNGHLEVVKLLLEAGADVNAK 97 (126)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCcHHHHHHHcChHHHHHHHHHcCCCCccc
Confidence 999999999999999999999999998654
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.85 E-value=3.5e-21 Score=131.80 Aligned_cols=100 Identities=22% Similarity=0.210 Sum_probs=93.0
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCccccccc
Q 038957 54 MSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNY-VPAVKNGTEAEPESLLRM 132 (169)
Q Consensus 54 ~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~~~~~ 132 (169)
.+..|.|+||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++. +++ ++.
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~------------~~~ 135 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE------------LNQ 135 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC------------CCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC------------ccc
Confidence 356788999999999999999999999888 788899999999999999999999999998 777 699
Q ss_pred cCCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 133 TEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 133 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 136 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 169 (222)
T 3ehr_A 136 QNKLGDTALHAAAWKGYADIVQLLLAKGARTDLR 169 (222)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 9999999999999999999999999999998654
No 102
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.85 E-value=8.4e-21 Score=116.43 Aligned_cols=93 Identities=22% Similarity=0.165 Sum_probs=82.0
Q ss_pred hccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccc
Q 038957 51 FSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLL 130 (169)
Q Consensus 51 ~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~ 130 (169)
....+.+|.|+||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.+++ +
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~------------~ 83 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD------------V 83 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------T
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------c
Confidence 346678899999999999999999999998887 788899999999999999999999999999888 6
Q ss_pred cccCCCCCcHHHHHHhhCcHHHHHHH
Q 038957 131 RMTEFEGNTSLHNGVGEYFIKLYKSL 156 (169)
Q Consensus 131 ~~~~~~~~t~l~~A~~~~~~~~~~~L 156 (169)
+.+|..|.||||+|+..++.+++++|
T Consensus 84 ~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 84 XAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cccccCCCcHHHHHHHcCCHHHHHHh
Confidence 88999999999999999999999887
No 103
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.85 E-value=2.7e-21 Score=125.63 Aligned_cols=101 Identities=16% Similarity=0.115 Sum_probs=91.3
Q ss_pred ccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCcccccc
Q 038957 52 STMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLR 131 (169)
Q Consensus 52 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~ 131 (169)
+..+..|.|+||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+ .|+.+++++|++.+++ ++
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~------------~~ 71 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE------------PN 71 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC------------CC
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC------------CC
Confidence 45678899999999999999999999999887 7889999999999996 8999999999999888 69
Q ss_pred ccCCCCCc-HHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 132 MTEFEGNT-SLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 132 ~~~~~~~t-~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
.+|..|.| |||+|+..|+.+++++|+++|++++..
T Consensus 72 ~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 107 (156)
T 1bi7_B 72 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVR 107 (156)
T ss_dssp CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCC
T ss_pred CcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCccc
Confidence 99999999 999999999999999999999998754
No 104
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.84 E-value=2.3e-22 Score=147.61 Aligned_cols=124 Identities=10% Similarity=0.027 Sum_probs=100.1
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhh--hccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchh--ccccCCCCCCHHHHHH
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNI--FSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSL--LRKNNWKGETALLIAA 100 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~--~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~--~~~~~~~g~tpl~~a~ 100 (169)
.+|||.|+..|+.+++++|++.+... ....+..|.||||+|+..|+.+++++|++.+++. .+..+.+ .||||+|+
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa 171 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAA 171 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHH
Confidence 47899999999999999999887521 1134456789999999999999999999988521 1112222 89999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCccccccc--cCCCCCcHHHHHH-hhCcHHHHHHHHHcCC
Q 038957 101 RAGDPAIVSTLLNYVPAVKNGTEAEPESLLRM--TEFEGNTSLHNGV-GEYFIKLYKSLHARGT 161 (169)
Q Consensus 101 ~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~--~~~~~~t~l~~A~-~~~~~~~~~~Ll~~g~ 161 (169)
..|+.+++++|++.|++ ++. .|..|.||||+|+ .+|+.+++++|+++|+
T Consensus 172 ~~G~~eiv~~Ll~~ga~------------~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 172 ENGHLHVLNRLCELAPT------------EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp HTTCHHHHHHHHHSCGG------------GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred HCCCHHHHHHHHHcCCc------------cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence 99999999999999888 455 7888999999999 9999999999998764
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=9.7e-21 Score=126.08 Aligned_cols=98 Identities=20% Similarity=0.175 Sum_probs=90.2
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccC
Q 038957 55 SPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTE 134 (169)
Q Consensus 55 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~ 134 (169)
+..|.||||+|+..|+.+++++|+. +.+ ++.+|..|+||||+|+..|+.+++++|++.+++ ++.++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------~~~~~ 106 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------------LDHRD 106 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------TTCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------CCcCC
Confidence 3467899999999999999999999 666 788999999999999999999999999999988 57777
Q ss_pred -CCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 135 -FEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 135 -~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
..|+||||+|+..|+.+++++|+++|++++..
T Consensus 107 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 139 (183)
T 3deo_A 107 MRGGLTALHMAAGYVRPEVVEALVELGADIEVE 139 (183)
T ss_dssp SSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC
T ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCC
Confidence 88999999999999999999999999998754
No 106
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.84 E-value=1.2e-20 Score=136.31 Aligned_cols=119 Identities=19% Similarity=0.162 Sum_probs=100.7
Q ss_pred CCCCCCcccHHHHHHHHccC---HHHHHHHHHHhhhhhccCCCCCCcHHHHHHH----hCCHHHHHHHHHhcch------
Q 038957 17 DQELPTTMDHELLNVLRRED---EHQIRLLAVRMQNIFSTMSPRGNIVLHMAIR----FQKHKVVQEILWRQLS------ 83 (169)
Q Consensus 17 ~~~~~~~~~~~l~~a~~~g~---~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~----~~~~~~~~~ll~~~~~------ 83 (169)
+..+..+. +|||+|+..|+ .++++.|++.+...++..+..|+||||+|+. .|+.+++++|++.+..
T Consensus 158 n~~d~~g~-TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~ 236 (327)
T 1sw6_A 158 LYGDNMGE-SCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQ 236 (327)
T ss_dssp TBCCTTCC-CHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGG
T ss_pred CCcCCCCC-CHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhccc
Confidence 33344554 58999999998 7888888888755578889999999999999 8999999999886431
Q ss_pred --------------------------------------hccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC
Q 038957 84 --------------------------------------LLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAE 125 (169)
Q Consensus 84 --------------------------------------~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~ 125 (169)
.++.+|..|+||||+|+..|+.+++++|++.|++
T Consensus 237 ~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad-------- 308 (327)
T 1sw6_A 237 NRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD-------- 308 (327)
T ss_dssp GCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC--------
T ss_pred chHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------
Confidence 1677889999999999999999999999999999
Q ss_pred ccccccccCCCCCcHHHHHHhhC
Q 038957 126 PESLLRMTEFEGNTSLHNGVGEY 148 (169)
Q Consensus 126 ~~~~~~~~~~~~~t~l~~A~~~~ 148 (169)
++.+|..|+||||+|+.+|
T Consensus 309 ----~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 309 ----PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp ----TTCCCTTSCCGGGGTCC--
T ss_pred ----CcccCCCCCCHHHHHHhcC
Confidence 6999999999999998764
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=1.7e-20 Score=130.30 Aligned_cols=97 Identities=21% Similarity=0.180 Sum_probs=89.8
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCccccccccC-
Q 038957 56 PRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTE- 134 (169)
Q Consensus 56 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~- 134 (169)
..|.||||+|+..|+.+++++|+. +.+ ++.+|..|.||||+|+..|+.+++++|++.+++ ++.++
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------~~~~~~ 108 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------------LDHRDM 108 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------------TTCCCS
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------------CCcCCC
Confidence 457899999999999999999999 766 788999999999999999999999999999998 57777
Q ss_pred CCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 135 FEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 135 ~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
..|.||||+|+..|+.+++++|+++|++++..
T Consensus 109 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 140 (244)
T 3ui2_A 109 RGGLTALHMAAGYVRPEVVEALVELGADIEVE 140 (244)
T ss_dssp SSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 78999999999999999999999999998754
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.1e-20 Score=116.67 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=92.8
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcCC
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAGD 104 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~~ 104 (169)
.++||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+|+..++
T Consensus 10 ~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tpl~~A~~~~~ 87 (115)
T 2l6b_A 10 NTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEHLAKKNGH 87 (115)
T ss_dssp CCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCTTHHHHTTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHCCC
Confidence 3589999999999999999999865 677889999999999999999999999999888 78899999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHH
Q 038957 105 PAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSL 141 (169)
Q Consensus 105 ~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l 141 (169)
.+++++|++.|++ ++.++..+.+|-
T Consensus 88 ~~~~~~Ll~~ga~------------~n~~~~~~~~~~ 112 (115)
T 2l6b_A 88 HEIVKLLDAKGAD------------VNARSWGSSHHH 112 (115)
T ss_dssp HHHHHHHHTTSSS------------HHHHSCCCC---
T ss_pred HHHHHHHHHcCCC------------CCcCCccccccc
Confidence 9999999999999 688888888874
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=3.8e-20 Score=132.30 Aligned_cols=106 Identities=17% Similarity=0.114 Sum_probs=90.0
Q ss_pred cHHHHHHHHc---cCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHH
Q 038957 25 DHELLNVLRR---EDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAAR 101 (169)
Q Consensus 25 ~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~ 101 (169)
.+|||.|+.. |+.+++++|++.+.. ++..|..|+||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+.
T Consensus 191 ~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~ 268 (301)
T 2b0o_E 191 ELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARK 268 (301)
T ss_dssp ECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHH
T ss_pred ccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHH
Confidence 4589999997 899999999999865 678899999999999999999999999999988 88899999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcH
Q 038957 102 AGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFI 150 (169)
Q Consensus 102 ~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~ 150 (169)
.++.+++++|++.+++ .|.||||+|+..|+.
T Consensus 269 ~~~~~iv~~Ll~~ga~------------------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 269 KHHKECEELLEQAQAG------------------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HTCHHHHHHHHHHHHH------------------TTSSCCC--------
T ss_pred cCCHHHHHHHHHhcCC------------------CCCChhHHHHhcCCc
Confidence 9999999999987554 378999999988763
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=6.6e-22 Score=145.18 Aligned_cols=120 Identities=8% Similarity=-0.098 Sum_probs=101.8
Q ss_pred cHHHHHHHHccCHHHHHHHHHHhhhh--hccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccc--cCCCCCCHHHHHH
Q 038957 25 DHELLNVLRREDEHQIRLLAVRMQNI--FSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRK--NNWKGETALLIAA 100 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~~~~~~--~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~--~~~~g~tpl~~a~ 100 (169)
.+|||+|+..|+.+++++|++.++.. .+..+.+ .||||+|+..|+.+++++|++.+++ +.. .|..|.||||+|+
T Consensus 129 ~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~TpL~~Aa 206 (376)
T 2aja_A 129 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAENYYAFRWAA 206 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCCCHHHHHH
Confidence 45999999999999999999998521 1111222 8999999999999999999999887 454 7888999999999
Q ss_pred -HcCCHHHHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHHcCCCccc
Q 038957 101 -RAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHARGTGVFS 165 (169)
Q Consensus 101 -~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 165 (169)
..|+.+++++|++.++ .+.||+|+|+.+|+.+++++|+++|++++.
T Consensus 207 ~~~G~~eiv~~Ll~~ga-------------------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~ 253 (376)
T 2aja_A 207 VGRGHHNVINFLLDCPV-------------------MLAYAEIHEFEYGEKYVNPFIARHVNRLKE 253 (376)
T ss_dssp STTCCHHHHHHHTTSHH-------------------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhCCC-------------------ccchHHHHHHHCCCHHHHHHHHhcCccccc
Confidence 9999999999998432 278999999999999999999999987643
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.76 E-value=6.3e-18 Score=103.50 Aligned_cols=86 Identities=22% Similarity=0.338 Sum_probs=79.5
Q ss_pred ccHHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHHcC
Q 038957 24 MDHELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAARAG 103 (169)
Q Consensus 24 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~~~ 103 (169)
..++||.|+..|+.+++++|++.+.. ++..|..|.||||+|+..++.+++++|+..+.+ ++.+|..|.||||+|+..|
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~ 101 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAFDISIDNG 101 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCcHHHHHHHcC
Confidence 35689999999999999999998754 677889999999999999999999999999888 7889999999999999999
Q ss_pred CHHHHHHH
Q 038957 104 DPAIVSTL 111 (169)
Q Consensus 104 ~~~~v~~l 111 (169)
+.+++++|
T Consensus 102 ~~~~~~~L 109 (110)
T 2zgd_A 102 NEDLAEIL 109 (110)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 99999876
No 112
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=7.8e-18 Score=119.08 Aligned_cols=96 Identities=20% Similarity=0.195 Sum_probs=87.8
Q ss_pred CCCcccHHHHHHHHc---cCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHH
Q 038957 20 LPTTMDHELLNVLRR---EDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETAL 96 (169)
Q Consensus 20 ~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl 96 (169)
+..+. +|||.|+.. |+.+++++|++.+.. ++..|..|.||||+|+..|+.+++++|++.+++ ++.+|..|.|||
T Consensus 166 ~~~g~-t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL 242 (278)
T 1dcq_A 166 HEPDE-TALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPL 242 (278)
T ss_dssp SSTTC-BHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred ccCCC-CcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHH
Confidence 34444 589999999 899999999999865 678899999999999999999999999999998 888999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCC
Q 038957 97 LIAARAGDPAIVSTLLNYVPAV 118 (169)
Q Consensus 97 ~~a~~~~~~~~v~~ll~~~~~~ 118 (169)
|+|+..|+.+++++|++.++..
T Consensus 243 ~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 243 DIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999998874
No 113
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=1.1e-17 Score=127.05 Aligned_cols=92 Identities=17% Similarity=0.166 Sum_probs=85.0
Q ss_pred cHHHHHHHH---ccCHHHHHHHHHHhhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhcchhccccCCCCCCHHHHHHH
Q 038957 25 DHELLNVLR---REDEHQIRLLAVRMQNIFSTMSPRGNIVLHMAIRFQKHKVVQEILWRQLSLLRKNNWKGETALLIAAR 101 (169)
Q Consensus 25 ~~~l~~a~~---~g~~~~~~~ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~tpl~~a~~ 101 (169)
.+|||.|+. .|+.+++++|++.+.. ++..|..|+||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+.
T Consensus 172 ~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~ 249 (497)
T 3lvq_E 172 ELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARK 249 (497)
T ss_dssp BCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHH
T ss_pred chHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHH
Confidence 458999976 8999999999999865 788899999999999999999999999999998 88999999999999999
Q ss_pred cCCHHHHHHHHhcCCCC
Q 038957 102 AGDPAIVSTLLNYVPAV 118 (169)
Q Consensus 102 ~~~~~~v~~ll~~~~~~ 118 (169)
.|+.+++++|++.|++.
T Consensus 250 ~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 250 KHHKECEELLEQAQAGT 266 (497)
T ss_dssp TTCHHHHHHHHHTCC--
T ss_pred cCCHHHHHHHHHhCCCC
Confidence 99999999999999984
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.75 E-value=6.9e-18 Score=123.51 Aligned_cols=97 Identities=16% Similarity=0.095 Sum_probs=89.9
Q ss_pred CCCcHHHHHHHh-CCHHHHHHHHHhcchhccccC--CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCcccccccc
Q 038957 57 RGNIVLHMAIRF-QKHKVVQEILWRQLSLLRKNN--WKGETALLIAARAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMT 133 (169)
Q Consensus 57 ~g~~~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~--~~g~tpl~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~ 133 (169)
.+.++||.|+.. ++.+++++|+..+.+ ++..+ ..|.||||+|+..|+.+++++|++.+++ ++.+
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad------------vn~~ 264 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD-VNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN------------VNQA 264 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------TTCC
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC-CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC------------CCCC
Confidence 356799999999 999999999999988 67777 8899999999999999999999999988 6999
Q ss_pred CCCCCcHHHHHHhhCcHHHHHHHHHcCCCcccc
Q 038957 134 EFEGNTSLHNGVGEYFIKLYKSLHARGTGVFSK 166 (169)
Q Consensus 134 ~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 166 (169)
|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 265 d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~ 297 (368)
T 3jue_A 265 DSAGRGPLHHATILGHTGLACLFLKRGADLGAR 297 (368)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCc
Confidence 999999999999999999999999999998754
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=69.53 E-value=14 Score=27.36 Aligned_cols=51 Identities=20% Similarity=0.251 Sum_probs=38.5
Q ss_pred HHHHccCHHHHHHHHHHhhh-----------hhccC--CCCCCcHHHHHHHhCCHHHHHHHHHh
Q 038957 30 NVLRREDEHQIRLLAVRMQN-----------IFSTM--SPRGNIVLHMAIRFQKHKVVQEILWR 80 (169)
Q Consensus 30 ~a~~~g~~~~~~~ll~~~~~-----------~~~~~--~~~g~~~l~~a~~~~~~~~~~~ll~~ 80 (169)
..+..|+...|+..+.++.+ +++.. ...|.|.+|+|+++.+.+++..|+..
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 34567999999999877642 12222 33589999999999999999988874
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=55.13 E-value=30 Score=25.75 Aligned_cols=58 Identities=17% Similarity=0.082 Sum_probs=34.5
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCccccccccC--CCCCcHHHHHHhhCcHHHHHHHHH
Q 038957 101 RAGDPAIVSTLLNYVPAVKNGTEAEPESLLRMTE--FEGNTSLHNGVGEYFIKLYKSLHA 158 (169)
Q Consensus 101 ~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~~~~--~~~~t~l~~A~~~~~~~~~~~Ll~ 158 (169)
..|+...|+..+..|.++...-.......++..+ .-|.|.+|.|++..+.++...|+.
T Consensus 31 ~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 31 VEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3466666666666655541111111111122222 358999999999999999999986
No 117
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=53.23 E-value=11 Score=17.56 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=15.4
Q ss_pred cHHHHHHHHccCHHHHHHHHH
Q 038957 25 DHELLNVLRREDEHQIRLLAV 45 (169)
Q Consensus 25 ~~~l~~a~~~g~~~~~~~ll~ 45 (169)
+..+..|+..||.+.++.|-.
T Consensus 14 EQqiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 14 RKQMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHH
Confidence 456788888888888876643
No 118
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=21.27 E-value=1.7e+02 Score=18.78 Aligned_cols=110 Identities=8% Similarity=-0.101 Sum_probs=56.8
Q ss_pred HHHHHHHHccCHHHHHHHHHHhhhhhccCCCCCCc-HHHHHHHhCCHHHHHHHHHhcchh--------------------
Q 038957 26 HELLNVLRREDEHQIRLLAVRMQNIFSTMSPRGNI-VLHMAIRFQKHKVVQEILWRQLSL-------------------- 84 (169)
Q Consensus 26 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~~-~l~~a~~~~~~~~~~~ll~~~~~~-------------------- 84 (169)
+-+-.|+..|+++....+..... +...|. .-..|...|+.++++....+-.+.
T Consensus 10 ~rF~LAL~lg~l~~A~e~a~~l~------~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla 83 (177)
T 3mkq_B 10 IRFDLALEYGNLDAALDEAKKLN------DSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQ 83 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHC------CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHhC------CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHH
Confidence 34677888888887766654421 111111 223344555555554444332210
Q ss_pred -ccccCCCCCCHHHHHHHcCCHH-HHHHHHhcCCCCCCCCCCCccccccccCCCCCcHHHHHHhhCcHHHHHHHHH-cCC
Q 038957 85 -LRKNNWKGETALLIAARAGDPA-IVSTLLNYVPAVKNGTEAEPESLLRMTEFEGNTSLHNGVGEYFIKLYKSLHA-RGT 161 (169)
Q Consensus 85 -~~~~~~~g~tpl~~a~~~~~~~-~v~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~-~g~ 161 (169)
+.....+-...++.+-..|+.+ ++++|.+.+.- .-+...|..+|..++++-|++ .|.
T Consensus 84 ~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~--------------------~eA~~~A~t~g~~~~a~~~~~~~~~ 143 (177)
T 3mkq_B 84 NIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSL--------------------PLAYAVAKANGDEAAASAFLEQAEV 143 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH--------------------HHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCCh--------------------HHHHHHHHHcCcHHHHHHHHHHhCC
Confidence 0011112234566666666654 66666654332 135667777888888887765 443
Done!