Citrus Sinensis ID: 038959

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80------
Protein Sequence
GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRSFSTFETK
Secondary Structure (PSIPRED)
cccEEEEEcccccEEEEEEcccccccHHHHHHHHHHHHHcccccccccEEcccccccEEEEEEEEcccccccEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEcEcccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHEEEcccccEEEEEEEcccccHHHHHccccccccccc
Coil and Loop (DISEMBL)
gssllqgklpdgQVIAVKRLSGRTSQGIVEfkneakviakpqhtnivrligcslhgperilvyefmpnksldffifgrsfstfetk
Flexible Loop (DISEMBL)
gssllqgklpdgqVIAVKrlsgrtsqgivefkneakviakpqhtniVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRsfstfetk
Low Complexity Region (SEG)
GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRSFSTFETK
Disordered region (IsUnstruct)
*************VIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRSF******
Disordered Region (DISOPRED)
*SSLLQGKLPDGQVIAVKRLSGR***GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRSFS*****
Disordered Region (DISEMBL)
GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRSFSTFETK
Disordered Region (DISPRO)
*SSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRSFS*F***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRSFSTFETK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	86	2.2.26 [Sep-21-2011]
O81833	815	G-type lectin S-receptor-	yes	no	0.918	0.096	0.632	2e-23
O81906	849	G-type lectin S-receptor-	no	no	0.883	0.089	0.605	8e-22
Q9LW83	850	G-type lectin S-receptor-	no	no	0.825	0.083	0.591	4e-21
Q9SXB8	842	G-type lectin S-receptor-	no	no	0.825	0.084	0.591	7e-20
Q8GYA4	669	Cysteine-rich receptor-li	no	no	0.825	0.106	0.605	2e-19
Q9LDT0	700	Putative cysteine-rich re	no	no	0.895	0.11	0.558	3e-19
Q9SY89	842	Putative G-type lectin S-	no	no	0.895	0.091	0.545	3e-19
Q8W4G6	627	Cysteine-rich receptor-li	no	no	0.825	0.113	0.605	3e-19
O64793	818	G-type lectin S-receptor-	no	no	0.825	0.086	0.563	4e-19
Q9SXB4	820	G-type lectin S-receptor-	no	no	0.825	0.086	0.591	5e-19

>sp|O81833|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana GN=SD11 PE=1 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 61/79 (77%)

Query: 4   LLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVY 63
           + +GKL DGQ IAVKRLS  + QG+ EFKNE K+IAK QH N+VRL+GC + G E +L+Y
Sbjct: 514 VYKGKLEDGQEIAVKRLSANSGQGVEEFKNEVKLIAKLQHRNLVRLLGCCIQGEECMLIY 573

Query: 64  EFMPNKSLDFFIFGRSFST 82
           E+MPNKSLDFFIF    ST
Sbjct: 574 EYMPNKSLDFFIFDERRST 592

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1

 Score =  102 bits (254), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 60/76 (78%)

Query: 4   LLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVY 63
           + +G L DG+ IAVKRLSG++ QG+ EFKNE  +IAK QH N+VRL+GC   G E++LVY
Sbjct: 543 VYKGVLEDGREIAVKRLSGKSGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVY 602

Query: 64  EFMPNKSLDFFIFGRS 79
           E+MPNKSLDFF+F  +
Sbjct: 603 EYMPNKSLDFFLFDET 618

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LW83|CE101_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2

 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 60/71 (84%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +G+L DG+ +A+KRLS  + QG+VEFKNEA +IAK QHTN+V+L+GC +   E++L+YE+
Sbjct: 543 KGRLIDGEEVAIKRLSLASGQGLVEFKNEAMLIAKLQHTNLVKLLGCCVEKDEKMLIYEY 602

Query: 66  MPNKSLDFFIF 76
           MPNKSLD+F+F
Sbjct: 603 MPNKSLDYFLF 613

Promotes the expression of genes involved in photosynthesis at least in dedifferentiated calli.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3

 Score = 95.9 bits (237), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 42/71 (59%), Positives = 56/71 (78%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +GKLP+GQ IAVKRLS ++ QG+ E  NE  VI+K QH N+V+L+GC + G ER+LVYE+
Sbjct: 540 KGKLPEGQEIAVKRLSRKSGQGLEELMNEVVVISKLQHRNLVKLLGCCIEGEERMLVYEY 599

Query: 66  MPNKSLDFFIF 76
           MP KSLD ++F
Sbjct: 600 MPKKSLDAYLF 610

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/71 (60%), Positives = 55/71 (77%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +G L DG  +AVKRLS  + QG VEFKNE  ++AK QH N+VRL+G  L G ER+LVYE+
Sbjct: 364 KGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEY 423

Query: 66  MPNKSLDFFIF 76
           +PNKSLD+F+F
Sbjct: 424 VPNKSLDYFLF 434

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LDT0|CRK30_ARATH Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=3 SV=1

 Score = 94.0 bits (232), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/77 (55%), Positives = 59/77 (76%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +G L +G  +AVKRLS  + QG +EFKNE  ++AK QH N+VRL+G +L G E+ILV+EF
Sbjct: 362 KGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEF 421

Query: 66  MPNKSLDFFIFGRSFST 82
           +PNKSLD+F+FG +  T
Sbjct: 422 VPNKSLDYFLFGSTNPT 438

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SY89|Y1661_ARATH Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana GN=At1g61610 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 59/77 (76%)

Query: 3   SLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILV 62
           ++ +G   +G+ IAVKRLSG++ QG+ EFKNE  +IAK QH N+VRL+GC +   E++L+
Sbjct: 538 TVYKGNFSEGREIAVKRLSGKSKQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNEKMLL 597

Query: 63  YEFMPNKSLDFFIFGRS 79
           YE+MPNKSLD F+F  S
Sbjct: 598 YEYMPNKSLDRFLFDES 614

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8W4G6|CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/71 (60%), Positives = 54/71 (76%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +G   +G  +AVKRLS  + QG  EFKNE  V+AK QH N+VRL+G S+ G ERILVYE+
Sbjct: 353 KGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEY 412

Query: 66  MPNKSLDFFIF 76
           MPNKSLD+F+F
Sbjct: 413 MPNKSLDYFLF 423

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O64793|Y1675_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS=Arabidopsis thaliana GN=At1g67520 PE=2 SV=3

 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 59/71 (83%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +GKL +G+ +A+KRLS  + QG+VEFKNEA +IAK QHTN+V+++GC +   E++L+YE+
Sbjct: 512 KGKLLNGEEVAIKRLSLASGQGLVEFKNEAILIAKLQHTNLVQVLGCCIEKDEKMLIYEY 571

Query: 66  MPNKSLDFFIF 76
           M NKSLD+F+F
Sbjct: 572 MQNKSLDYFLF 582

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB4|Y1130_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana GN=At1g11300 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/71 (59%), Positives = 55/71 (77%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +GKL +GQ IAVKRLS  + QG+ E  NE  VI+K QH N+V+L+GC + G ER+LVYEF
Sbjct: 525 KGKLQEGQEIAVKRLSRASGQGLEELVNEVVVISKLQHRNLVKLLGCCIAGEERMLVYEF 584

Query: 66  MPNKSLDFFIF 76
           MP KSLD+++F
Sbjct: 585 MPKKSLDYYLF 595

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
225463860	795	PREDICTED: G-type lectin S-receptor-like	0.825	0.089	0.676	1e-22
359480365	316	PREDICTED: cysteine-rich receptor-like p	0.825	0.224	0.704	2e-22
222619371	1568	hypothetical protein OsJ_03699 [Oryza sa	0.883	0.048	0.644	2e-22
359480371	1314	PREDICTED: LOW QUALITY PROTEIN: putative	0.813	0.053	0.661	2e-22
297720465	80	Os01g0784500 [Oryza sativa Japonica Grou	0.895	0.962	0.662	3e-22
296081048	711	unnamed protein product [Vitis vinifera]	0.837	0.101	0.666	4e-22
226495311	674	protein kinase precursor [Zea mays] gi|1	0.825	0.105	0.661	6e-22
115440355	827	Os01g0783800 [Oryza sativa Japonica Grou	0.883	0.091	0.631	6e-22
56561617	637	S-receptor kinase-like protein 1 [Seneci	0.825	0.111	0.647	7e-22
147776811	751	hypothetical protein VITISV_000269 [Viti	0.825	0.094	0.661	8e-22

>gi|225463860|ref|XP_002268342.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520-like [Vitis vinifera]

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/71 (67%), Positives = 61/71 (85%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +GKLP+GQ IAVKRLS  +SQG+VEFKNE ++I K QH N+VRL+GC + G E++L+YEF
Sbjct: 492 KGKLPEGQEIAVKRLSRGSSQGLVEFKNEIRLIVKLQHMNLVRLLGCCIKGEEKMLIYEF 551

Query: 66  MPNKSLDFFIF 76
           MPNKSLDFF+F
Sbjct: 552 MPNKSLDFFLF 562

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480365|ref|XP_003632437.1| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Vitis vinifera]

 Score =  110 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/71 (70%), Positives = 60/71 (84%)

Query: 6  QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
          +GKL DGQ IAVKRLS  + QG+VEFKNE ++I+  QH NI+RLIGCS+ G ERIL+YEF
Sbjct: 23 KGKLIDGQEIAVKRLSRGSGQGLVEFKNEIRLISNLQHMNIIRLIGCSISGEERILIYEF 82

Query: 66 MPNKSLDFFIF 76
          MPNKSLDFF+F
Sbjct: 83 MPNKSLDFFLF 93

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222619371|gb|EEE55503.1| hypothetical protein OsJ_03699 [Oryza sativa Japonica Group]

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/76 (64%), Positives = 61/76 (80%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           QG LPD Q IAVKRL+  + QG+VEFKNE  +IAK QH N+VRL+GC + G E+IL+YE+
Sbjct: 605 QGNLPDRQDIAVKRLATNSGQGLVEFKNEVLLIAKLQHVNLVRLLGCCIQGEEKILIYEY 664

Query: 66  MPNKSLDFFIFGRSFS 81
           MPNKSLDFF+F +S S
Sbjct: 665 MPNKSLDFFLFEKSRS 680

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480371|ref|XP_003632440.1| PREDICTED: LOW QUALITY PROTEIN: putative serine/threonine-protein kinase receptor-like [Vitis vinifera]

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/71 (66%), Positives = 61/71 (85%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +GKLP+GQ IAVKRLS  + QG+VEFKNE ++IA+ QH N+VRL+GC + G E++L+YEF
Sbjct: 390 KGKLPEGQEIAVKRLSRGSGQGLVEFKNEIRLIARLQHMNLVRLLGCCIKGEEKMLIYEF 449

Query: 66  MPNKSLDFFIF 76
           MPNKSLDFF+F
Sbjct: 450 MPNKSLDFFLF 460

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297720465|ref|NP_001172594.1| Os01g0784500 [Oryza sativa Japonica Group] gi|255673757|dbj|BAH91324.1| Os01g0784500, partial [Oryza sativa Japonica Group]

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/77 (66%), Positives = 61/77 (79%)

Query: 6  QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
          QG+L DGQ +AVKRLS R+ QG+VEFKNE K+IAK QH N+VRL+GC +   ERIL+YE 
Sbjct: 4  QGRLEDGQEVAVKRLSKRSVQGVVEFKNEVKLIAKLQHRNLVRLLGCCIDDDERILLYEH 63

Query: 66 MPNKSLDFFIFGRSFST 82
          M NKSLD FIFG+  ST
Sbjct: 64 MHNKSLDTFIFGQFIST 80

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081048|emb|CBI18329.3| unnamed protein product [Vitis vinifera]

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/72 (66%), Positives = 61/72 (84%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +GKL +GQ IAVKRLS  +SQG+VEFKNE ++I K QH N+VRL+GC + G E++L+YEF
Sbjct: 498 KGKLLEGQEIAVKRLSRGSSQGLVEFKNEIRLIVKLQHMNLVRLLGCCIKGEEKMLIYEF 557

Query: 66  MPNKSLDFFIFG 77
           MPNKSLDFF+FG
Sbjct: 558 MPNKSLDFFLFG 569

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495311|ref|NP_001147825.1| protein kinase precursor [Zea mays] gi|195613974|gb|ACG28817.1| protein kinase [Zea mays] gi|414868052|tpg|DAA46609.1| TPA: putative DUF26-domain receptor-like protein kinase family protein [Zea mays]

 Score =  108 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/71 (66%), Positives = 58/71 (81%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +G+ PDG  IAVKRL+  + QG VEFKNE ++IAK QHTN+VRL+GC   G E+ILVYE+
Sbjct: 372 KGQFPDGTEIAVKRLASHSGQGFVEFKNEVQLIAKLQHTNLVRLLGCCSQGEEKILVYEY 431

Query: 66  MPNKSLDFFIF 76
           +PNKSLDFFIF
Sbjct: 432 LPNKSLDFFIF 442

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115440355|ref|NP_001044457.1| Os01g0783800 [Oryza sativa Japonica Group] gi|53791697|dbj|BAD53292.1| putative serine/threonine kinase [Oryza sativa Japonica Group] gi|113533988|dbj|BAF06371.1| Os01g0783800 [Oryza sativa Japonica Group]

 Score =  108 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/76 (63%), Positives = 61/76 (80%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +G LPD Q IAVKRL+  + QG+VEFKNE  +IAK QH N+VRL+GC + G E+IL+YE+
Sbjct: 528 KGNLPDRQDIAVKRLATNSGQGLVEFKNEVLLIAKLQHVNLVRLLGCCIQGEEKILIYEY 587

Query: 66  MPNKSLDFFIFGRSFS 81
           MPNKSLDFF+F +S S
Sbjct: 588 MPNKSLDFFLFEKSRS 603

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|56561617|emb|CAG28412.1| S-receptor kinase-like protein 1 [Senecio squalidus]

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 46/71 (64%), Positives = 61/71 (85%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +GKL DG+ IA+KRLS  + QG+VEFKNE  +IAK QHTN+VR++GC +HG E++L+YE+
Sbjct: 336 KGKLSDGREIAIKRLSRTSGQGLVEFKNELILIAKLQHTNLVRVLGCCIHGEEKMLIYEY 395

Query: 66  MPNKSLDFFIF 76
           MPNKSLDFF+F
Sbjct: 396 MPNKSLDFFLF 406

Source: Senecio squalidus

Species: Senecio squalidus

Genus: Senecio

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147776811|emb|CAN74670.1| hypothetical protein VITISV_000269 [Vitis vinifera]

 Score =  107 bits (268), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 47/71 (66%), Positives = 60/71 (84%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +GKLP+GQ IAVKRLS  + QG+VEFKNE ++IA+ QH N+VRL+GC   G E++L+YEF
Sbjct: 452 KGKLPEGQEIAVKRLSRGSGQGLVEFKNEIRLIARLQHMNLVRLLGCCSKGEEKMLIYEF 511

Query: 66  MPNKSLDFFIF 76
           MPNKSLDFF+F
Sbjct: 512 MPNKSLDFFLF 522

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
TAIR|locus:2131694	815	AT4G27300 [Arabidopsis thalian	0.895	0.094	0.649	2.9e-21
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.825	0.083	0.647	1.2e-19
TAIR|locus:2093397	850	CES101 "CALLUS EXPRESSION OF R	0.825	0.083	0.591	7e-19
TAIR|locus:2121606	673	CRK13 "cysteine-rich RLK (RECE	0.883	0.112	0.558	1.2e-17
TAIR|locus:2197714	792	AT1G61440 [Arabidopsis thalian	0.872	0.094	0.573	1.2e-17
TAIR|locus:2200908	842	AT1G61610 [Arabidopsis thalian	0.895	0.091	0.545	1.3e-17
TAIR|locus:2121676	669	CRK10 "cysteine-rich RLK (RECE	0.825	0.106	0.605	1.5e-17
TAIR|locus:2123116	700	CRK30 "cysteine-rich RLK (RECE	0.906	0.111	0.567	1.6e-17
TAIR|locus:2123111	669	CRK34 "cysteine-rich RLK (RECE	0.825	0.106	0.605	1.9e-17
TAIR|locus:2200923	802	AT1G61550 [Arabidopsis thalian	0.825	0.088	0.619	3.3e-17

TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 2.9e-21, P = 2.9e-21
 Identities = 50/77 (64%), Positives = 60/77 (77%)

Query:     6 QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
             +GKL DGQ IAVKRLS  + QG+ EFKNE K+IAK QH N+VRL+GC + G E +L+YE+
Sbjct:   516 KGKLEDGQEIAVKRLSANSGQGVEEFKNEVKLIAKLQHRNLVRLLGCCIQGEECMLIYEY 575

Query:    66 MPNKSLDFFIFGRSFST 82
             MPNKSLDFFIF    ST
Sbjct:   576 MPNKSLDFFIFDERRST 592

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 46/71 (64%), Positives = 58/71 (81%)

Query:     6 QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
             +G L DG+ IAVKRLSG++ QG+ EFKNE  +IAK QH N+VRL+GC   G E++LVYE+
Sbjct:   545 KGVLEDGREIAVKRLSGKSGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEY 604

Query:    66 MPNKSLDFFIF 76
             MPNKSLDFF+F
Sbjct:   605 MPNKSLDFFLF 615

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2093397 CES101 "CALLUS EXPRESSION OF RBCS 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 7.0e-19, P = 7.0e-19
 Identities = 42/71 (59%), Positives = 60/71 (84%)

Query:     6 QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
             +G+L DG+ +A+KRLS  + QG+VEFKNEA +IAK QHTN+V+L+GC +   E++L+YE+
Sbjct:   543 KGRLIDGEEVAIKRLSLASGQGLVEFKNEAMLIAKLQHTNLVKLLGCCVEKDEKMLIYEY 602

Query:    66 MPNKSLDFFIF 76
             MPNKSLD+F+F
Sbjct:   603 MPNKSLDYFLF 613

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

TAIR|locus:2121606 CRK13 "cysteine-rich RLK (RECEPTOR-like protein kinase) 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 43/77 (55%), Positives = 60/77 (77%)

Query:     1 GSS-LLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER 59
             GS  + +G+LPDG+ IAVKRLS +T Q   EFKNE  ++AK QH N+VRL+G S+ G E+
Sbjct:   368 GSGHVFKGRLPDGKEIAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEK 427

Query:    60 ILVYEFMPNKSLDFFIF 76
             I+VYE++PN+SLD+ +F
Sbjct:   428 IIVYEYLPNRSLDYILF 444

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002237 "response to molecule of bacterial origin" evidence=IEP;RCA

GO:0009626 "plant-type hypersensitive response" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2197714 AT1G61440 [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 43/75 (57%), Positives = 57/75 (76%)

Query:     3 SLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILV 62
             S+ +GKL DG+ IAVKRLS  + QG  EF NE  +I+K QH N+VR++GC + G E++L+
Sbjct:   491 SVYKGKLQDGREIAVKRLSSSSEQGKQEFMNEIVLISKLQHRNLVRVLGCCVEGKEKLLI 550

Query:    63 YEFMPNKSLDFFIFG 77
             YEFM NKSLD F+FG
Sbjct:   551 YEFMKNKSLDTFVFG 565

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 1.3e-17, P = 1.3e-17
 Identities = 42/77 (54%), Positives = 59/77 (76%)

Query:     3 SLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILV 62
             ++ +G   +G+ IAVKRLSG++ QG+ EFKNE  +IAK QH N+VRL+GC +   E++L+
Sbjct:   538 TVYKGNFSEGREIAVKRLSGKSKQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNEKMLL 597

Query:    63 YEFMPNKSLDFFIFGRS 79
             YE+MPNKSLD F+F  S
Sbjct:   598 YEYMPNKSLDRFLFDES 614

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.5e-17, P = 1.5e-17
 Identities = 43/71 (60%), Positives = 55/71 (77%)

Query:     6 QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
             +G L DG  +AVKRLS  + QG VEFKNE  ++AK QH N+VRL+G  L G ER+LVYE+
Sbjct:   364 KGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEY 423

Query:    66 MPNKSLDFFIF 76
             +PNKSLD+F+F
Sbjct:   424 VPNKSLDYFLF 434

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

TAIR|locus:2123116 CRK30 "cysteine-rich RLK (RECEPTOR-like protein kinase) 30" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 46/81 (56%), Positives = 61/81 (75%)

Query:     6 QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
             +G L +G  +AVKRLS  + QG +EFKNE  ++AK QH N+VRL+G +L G E+ILV+EF
Sbjct:   362 KGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEF 421

Query:    66 MPNKSLDFFIFGRSFSTFETK 86
             +PNKSLD+F+FG   ST  TK
Sbjct:   422 VPNKSLDYFLFG---STNPTK 439

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2123111 CRK34 "cysteine-rich RLK (RECEPTOR-like protein kinase) 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 1.9e-17, P = 1.9e-17
 Identities = 43/71 (60%), Positives = 55/71 (77%)

Query:     6 QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
             +GKL  G  +AVKRLS  + QG  EFKNEA +++K QH N+VRL+G  L G E+ILVYEF
Sbjct:   361 RGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEF 420

Query:    66 MPNKSLDFFIF 76
             +PNKSLD+F+F
Sbjct:   421 VPNKSLDYFLF 431

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200923 AT1G61550 [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 3.3e-17, P = 3.3e-17
 Identities = 44/71 (61%), Positives = 54/71 (76%)

Query:     6 QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
             +GKL DG+ IAVKRLS  + QG  EF NE  +I+K QH N+VR++GC + G ER+LVYEF
Sbjct:   505 KGKLQDGKEIAVKRLSSSSGQGKEEFMNEILLISKLQHINLVRILGCCIEGEERLLVYEF 564

Query:    66 MPNKSLDFFIF 76
             M NKSLD FIF
Sbjct:   565 MVNKSLDTFIF 575

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	86
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	7e-12
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-11
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	8e-11
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-10
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-09
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	8e-08
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-07
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-07
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-06
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-06
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-06
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	4e-06
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	7e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	7e-06
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	7e-06
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	8e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	9e-06
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	9e-06
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-05
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-05
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-05
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-05
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-05
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	7e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-05
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-04
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-04
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	3e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-04
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	5e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	6e-04
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	6e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	7e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	7e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	8e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	9e-04
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	0.001
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	0.002
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.002
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	0.004

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 58.3 bits (142), Expect = 7e-12
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 7  GKLPDGQV-IAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
          GK    +V +AVK L    + Q I EF  EA+++ K  H N+V+L+G         +V E
Sbjct: 22 GKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVME 81

Query: 65 FMPNKSLDFFI 75
          +M    L  ++
Sbjct: 82 YMEGGDLLSYL 92

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 16 AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF 74
          AVK L  G + +   EF  EA ++ K  H NIVRL+G    G    +V E+MP   L  F
Sbjct: 32 AVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDF 91

Query: 75 I 75
          +
Sbjct: 92 L 92

Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 16 AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF 74
          AVK L    + Q I EF  EA+++ K  H NIV+L+G        ++V E+MP   L  +
Sbjct: 32 AVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDY 91

Query: 75 I 75
          +
Sbjct: 92 L 92

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 16 AVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF 74
          AVK L    S +   +F  EA+V+ K  H N+VRL+G         LV E+M    L  +
Sbjct: 27 AVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDY 86

Query: 75 I 75
          +
Sbjct: 87 L 87

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 53.8 bits (130), Expect = 2e-10
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 11 DGQVIAVKRLSGRTSQGIVE-FKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK 69
           G+ +A+K +    S  ++E    E +++ K  H NIV+L G         LV E+    
Sbjct: 17 TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGG 76

Query: 70 SLDFFI 75
          SL   +
Sbjct: 77 SLKDLL 82

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 49.6 bits (119), Expect = 9e-09
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 8   KLPDGQVIAVKRL--SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
               G+++AVK L      S+     + E +++ +  H NIVRLI          LV E+
Sbjct: 20  HKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEY 79

Query: 66  MPNKSL-DFFIFGRSFSTFETK 86
                L D+   G   S  E K
Sbjct: 80  CEGGDLFDYLSRGGPLSEDEAK 101

Length = 260

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 47.0 bits (112), Expect = 8e-08
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 6/82 (7%)

Query: 3  SLLQG--KLPDGQVI--AVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP 57
          S+++G   +  G+ +  AVK L       G  EF  EA V+A+  H  IVRLIG    G 
Sbjct: 10 SVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GE 68

Query: 58 ERILVYEFMPNKSLDFFIFGRS 79
            +LV E  P   L  ++  R 
Sbjct: 69 PLMLVMELAPLGPLLKYLKKRR 90

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 11 DGQVIAVKRLSGRTSQGIVE-FKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK 69
           G+++A+K +  +  +   E    E K++ K +H NIVRL        +  LV E+    
Sbjct: 23 TGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGG 82

Query: 70 SLDFFI 75
           L   +
Sbjct: 83 DLFDLL 88

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 45.8 bits (109), Expect = 2e-07
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 8  KLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
          KLP  + I  A+K L +G + +  ++F  EA ++ +  H NI+RL G        +++ E
Sbjct: 26 KLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE 85

Query: 65 FMPNKSLDFFI 75
          +M N SLD F+
Sbjct: 86 YMENGSLDKFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 44.0 bits (104), Expect = 1e-06
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 11 DGQVIAVKRLSGRTSQGIVE-FKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK 69
          D +++AVK L    S    + F+ EA+++   QH NIV+  G    G   I+V+E+M + 
Sbjct: 34 DKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHG 93

Query: 70 SLDFFI 75
           L+ F+
Sbjct: 94 DLNKFL 99

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 43.6 bits (103), Expect = 2e-06
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 15 IAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD 72
          +A+K L   TS +   E  +EA V+A   H ++VRL+G  L   +  L+ + MP   L 
Sbjct: 39 VAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-SSQVQLITQLMPLGCLL 96

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 43.2 bits (102), Expect = 2e-06
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 12 GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
          GQ +AVK L    S     F  EA V+   +H N+V+L+G  L G    +V E+M   SL
Sbjct: 29 GQKVAVKCLK-DDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSL 87

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 42.9 bits (101), Expect = 3e-06
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 12 GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
             +AVK L   T + + EF  EA V+ + +H N+V+L+G     P   ++ EFM   +L
Sbjct: 31 SLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 89

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 42.5 bits (100), Expect = 4e-06
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 7   GKLPDGQ--VIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVY 63
           G LP     ++AVK L    ++    +F+ EA ++A+  H NIV+L+G    G    L++
Sbjct: 28  GLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLF 87

Query: 64  EFMPNKSLDFFIFGRS 79
           E+M    L+ F+  RS
Sbjct: 88  EYMAYGDLNEFLRHRS 103

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 41.9 bits (98), Expect = 7e-06
 Identities = 20/65 (30%), Positives = 36/65 (55%)

Query: 11 DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
          D  ++AVK L   +     +F+ EA+++   QH +IVR  G    G   ++V+E+M +  
Sbjct: 34 DKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGD 93

Query: 71 LDFFI 75
          L+ F+
Sbjct: 94 LNRFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 41.6 bits (98), Expect = 7e-06
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%)

Query: 12 GQVIAVKRLSGRTSQG---IVEFKNEAKVIAKPQHTNIVRLIGCS--LHGPERILVYEFM 66
          G+ +AVK L    S       +F+ E +++    H NIV+  G      G    L+ E++
Sbjct: 33 GEQVAVKSL--NHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYL 90

Query: 67 PNKSLDFFI 75
          P+ SL  ++
Sbjct: 91 PSGSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 41.6 bits (97), Expect = 7e-06
 Identities = 20/65 (30%), Positives = 36/65 (55%)

Query: 11 DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
          D  ++AVK L   +     +F  EA+++   QH +IV+  G  + G   I+V+E+M +  
Sbjct: 34 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 93

Query: 71 LDFFI 75
          L+ F+
Sbjct: 94 LNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 41.7 bits (98), Expect = 8e-06
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 30 EFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVYEFMPNKSL 71
          +F  EAKV+ K  H N+V+L G C+   P  I V E+M N  L
Sbjct: 45 DFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFI-VTEYMANGCL 86

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 6/74 (8%)

Query: 11 DGQVIAVK--RLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER-ILVY-EFM 66
           G+++AVK   LSG + + +   + E ++++  QH NIVR  G      +  + ++ E++
Sbjct: 24 TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV 83

Query: 67 PNKSLDFFI--FGR 78
             SL   +  FG+
Sbjct: 84 SGGSLSSLLKKFGK 97

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 41.5 bits (97), Expect = 9e-06
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 11 DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
          D  ++AVK L   T     +F+ EA+++   QH +IV+  G    G   I+V+E+M +  
Sbjct: 34 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 93

Query: 71 LDFFI 75
          L+ F+
Sbjct: 94 LNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 41.3 bits (97), Expect = 1e-05
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 13  QVIAVKRL----SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
             +A+K L      +  Q   EF+ EA++++  QH NIV L+G         +++E++ +
Sbjct: 36  TSVAIKTLKENAEPKVQQ---EFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAH 92

Query: 69  KSLDFFIFGRS 79
             L  F+   S
Sbjct: 93  GDLHEFLVRNS 103

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 41.2 bits (97), Expect = 1e-05
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 15  IAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF 73
           +AVK L    +     +F  E K++++    NI RL+G     P   ++ E+M N  L+ 
Sbjct: 49  VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQ 108

Query: 74  FI 75
           F+
Sbjct: 109 FL 110

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 12 GQVIAVKRLSGRTSQGIVEFK--NEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP 67
          G+ +A+K+++ R  +G +  +   E K +   QH  +V+L+    HG   +LV E+MP
Sbjct: 25 GETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYMP 82

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 15 IAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF 73
          +A+K L SG T +   +F +EA ++ +  H NI+ L G        +++ EFM N +LD 
Sbjct: 35 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDS 94

Query: 74 FI 75
          F+
Sbjct: 95 FL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 15  IAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF 73
           +AVK L    S Q   +F  EA +++K  H NIVRLIG S     R ++ E M    L  
Sbjct: 39  VAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKS 98

Query: 74  FI 75
           F+
Sbjct: 99  FL 100

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 40.1 bits (94), Expect = 3e-05
 Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)

Query: 12 GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHG-PERILVYEFMPNK 69
          G+V+AVK+L   T++ + +F+ E +++   QH NIV+  G C   G     LV E++P  
Sbjct: 33 GEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYG 92

Query: 70 SL-DFFI 75
          SL D+  
Sbjct: 93 SLRDYLQ 99

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 39.9 bits (93), Expect = 3e-05
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 8  KLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
          KLP  + I  A+K L +G T +   +F +EA ++ +  H NI+ L G        ++V E
Sbjct: 26 KLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTE 85

Query: 65 FMPNKSLDFFI 75
          +M N SLD F+
Sbjct: 86 YMENGSLDAFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 18/63 (28%), Positives = 31/63 (49%)

Query: 10 PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK 69
            G+ +A+K +   + +   +  NE +++ K +H NIV+  G  L   E  +V EF    
Sbjct: 23 RTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGG 82

Query: 70 SLD 72
          SL 
Sbjct: 83 SLK 85

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 8e-05
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 11 DGQVIAVKRLS--GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           G  +A+K++S      + +     E  ++   +H NIV+ IG         ++ E+  N
Sbjct: 24 TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAEN 83

Query: 69 KSL 71
           SL
Sbjct: 84 GSL 86

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 38.4 bits (89), Expect = 1e-04
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 14  VIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD 72
           ++AVK L +  T     +F  E K++++ ++ NI+RL+G  +      ++ E+M N  L+
Sbjct: 46  LVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLN 105

Query: 73  FFIFGRS-FSTF 83
            F+  R   STF
Sbjct: 106 QFLSQREIESTF 117

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 38.1 bits (88), Expect = 1e-04
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 12  GQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
            Q++A+K L    + Q   EF+ EA ++A+  H NIV L+G         +++E++    
Sbjct: 34  AQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGD 93

Query: 71  LDFFIFGRS 79
           L  F+  RS
Sbjct: 94  LHEFLIMRS 102

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 37.5 bits (87), Expect = 2e-04
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 13  QVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
             +AVK L  G T Q   EF  EA +++   H NIV+L+G  L    + ++ E M    L
Sbjct: 27  IRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDL 86

Query: 72  DFFIFGRSFSTFET 85
             ++       F  
Sbjct: 87  LSYLRDARVERFGP 100

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 37.3 bits (86), Expect = 2e-04
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 15 IAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF 73
          +A+K L  G T +   +F +EA ++ +  H NI+RL G        +++ E+M N +LD 
Sbjct: 36 VAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDK 95

Query: 74 FI 75
          ++
Sbjct: 96 YL 97

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 37.5 bits (87), Expect = 2e-04
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 12/86 (13%)

Query: 3  SLLQGKL--PDG--QVIAVK--RLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG 56
          S+++G+L   DG    +AVK  +L   T   I EF +EA  +    H N+++LIG     
Sbjct: 14 SVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEA 73

Query: 57 ------PERILVYEFMPNKSLDFFIF 76
                P+ +++  FM +  L  F+ 
Sbjct: 74 SSLQKIPKPMVILPFMKHGDLHSFLL 99

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 37.2 bits (86), Expect = 3e-04
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 8  KLPDGQ--VIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
          KLP  +   +A+  L +G + +    F  EA  + +  H+NIVRL G    G   ++V E
Sbjct: 27 KLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTE 86

Query: 65 FMPNKSLDFFI 75
          +M N +LD F+
Sbjct: 87 YMSNGALDSFL 97

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 36.8 bits (85), Expect = 5e-04
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 12 GQVIAVKRLSGRTSQGIVE-FKNEAKVIAKPQHTNIVRLIGCSLHGPERI--LVYEFMPN 68
          G+++AVK L     Q     +K E  ++    H NIV+  GC      +   L+ E++P 
Sbjct: 33 GEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPL 92

Query: 69 KSL 71
           SL
Sbjct: 93 GSL 95

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 36.5 bits (84), Expect = 5e-04
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 30 EFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI 75
          +F  EA+V+ K  H  +V+L G         LV+EFM +  L  ++
Sbjct: 45 DFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYL 90

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 36.6 bits (84), Expect = 6e-04
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 6/68 (8%)

Query: 9  LPDGQVI----AVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVY 63
          +P+G+ +    A+K L+  T  +  VEF +EA ++A   H ++VRL+G  L  P   LV 
Sbjct: 29 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVT 87

Query: 64 EFMPNKSL 71
          + MP+  L
Sbjct: 88 QLMPHGCL 95

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 36.1 bits (83), Expect = 6e-04
 Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 6/77 (7%)

Query: 3  SLLQGKLPDGQVIAVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERIL 61
          ++LQG+   GQ +AVK +    T+Q    F  E  V+ K  H N+VRL+G  LH    I 
Sbjct: 21 AVLQGEYT-GQKVAVKNIKCDVTAQA---FLEETAVMTKLHHKNLVRLLGVILHNGLYI- 75

Query: 62 VYEFMPNKSLDFFIFGR 78
          V E M   +L  F+  R
Sbjct: 76 VMELMSKGNLVNFLRTR 92

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 36.2 bits (83), Expect = 7e-04
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 13  QVIAVKRLSGRTSQGI-VEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
           Q +A+K L  +    +  EFK+EA + ++ QH NIV L+G         +++ +  +  L
Sbjct: 36  QAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDL 95

Query: 72  DFFIFGRS 79
             F+  RS
Sbjct: 96  HEFLVMRS 103

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 36.2 bits (84), Expect = 7e-04
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 10 PDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
            G+VI  AVK L S + S  + +F  EA ++    H N++RL G  L  P  ++V E  
Sbjct: 19 SGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHP-LMMVTELA 77

Query: 67 PNKSL 71
          P  SL
Sbjct: 78 PLGSL 82

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 11 DGQVIAVKR--LSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
          DG++  +K   LS  + +   +  NE K++ K  H NI++         +  +V E+   
Sbjct: 24 DGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADG 83

Query: 69 KSLDFFI 75
            L   I
Sbjct: 84 GDLSQKI 90

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 35.9 bits (83), Expect = 8e-04
 Identities = 20/60 (33%), Positives = 30/60 (50%)

Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
           G+ +AVK++  R  Q      NE  ++   QH NIV +    L G E  +V EF+   +L
Sbjct: 44  GRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 35.7 bits (82), Expect = 9e-04
 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 4  LLQGKLPDGQVIAVKRLSGRTSQGI-VEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERIL 61
          + +G L D   +AVK       Q + ++F +EA+++ +  H NIV+LIG C+   P  I 
Sbjct: 11 VFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYI- 69

Query: 62 VYEFMPNKSLDFFIFGR 78
          V E +P    DF  F R
Sbjct: 70 VMELVPGG--DFLSFLR 84

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 35.7 bits (82), Expect = 0.001
 Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 10/81 (12%)

Query: 6  QGKLPDG--QVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG----- 56
          Q K  DG  Q +AVK L     +S  I EF  EA  + +  H N+++LIG SL       
Sbjct: 19 QLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR 78

Query: 57 -PERILVYEFMPNKSLDFFIF 76
           P  +++  FM +  L  F+ 
Sbjct: 79 LPIPMVILPFMKHGDLHTFLL 99

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 7/69 (10%)

Query: 9  LPDGQVIAVKRLS----GRTSQGIV-EFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVY 63
          L DG   AVK +S    G+T Q  V + + E  +++K QH NIV+ +G      + + ++
Sbjct: 22 LDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE-DNLYIF 80

Query: 64 -EFMPNKSL 71
           E +P  SL
Sbjct: 81 LELVPGGSL 89

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 34.5 bits (80), Expect = 0.002
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)

Query: 11  DGQVIAVK--RLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
            G+ +A+K  RL  +  + I+   NE  ++   +H NIV      L G E  +V E+M  
Sbjct: 43  TGKEVAIKKMRLRKQNKELII---NEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG 99

Query: 69  KSL 71
            SL
Sbjct: 100 GSL 102

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 33.9 bits (78), Expect = 0.004
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 10 PDGQVIAVKRLSGRTSQG-IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
          P+ +V A+K ++   S    +EF NEA V+ +    ++VRL+G    G   ++V E M
Sbjct: 35 PETRV-AIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELM 91

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	86
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.8
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.79
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.71
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.67
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.66
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.66
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.6
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.6
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.59
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.58
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.57
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.56
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.5
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.48
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.45
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.43
PHA02988	283	hypothetical protein; Provisional	99.43
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.43
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.42
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.41
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.41
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.41
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.4
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.4
KOG0610	459	consensus Putative serine/threonine protein kinase	99.39
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.39
KOG0586	596	consensus Serine/threonine protein kinase [General	99.38
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.38
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.38
KOG0605	550	consensus NDR and related serine/threonine kinases	99.37
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.37
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.37
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.37
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.37
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.37
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.36
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.36
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.36
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.36
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.35
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.35
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.35
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.35
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.35
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.34
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.34
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.34
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.34
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.34
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.34
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.34
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.33
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.33
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.32
PTZ00267	478	NIMA-related protein kinase; Provisional	99.32
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.32
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.32
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.32
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.32
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.31
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.31
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.31
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.31
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.3
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.3
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.3
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.3
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.3
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.29
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.29
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.29
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.29
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.29
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.29
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.29
KOG0198	313	consensus MEKK and related serine/threonine protei	99.29
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.28
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.28
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.28
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.28
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.28
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.27
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.27
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.27
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.27
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.27
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.27
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.27
KOG0578	550	consensus p21-activated serine/threonine protein k	99.27
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.27
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.26
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.26
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.26
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.26
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.26
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.26
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.26
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.26
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.26
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.26
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.25
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.25
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.25
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.25
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.25
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.25
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.25
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.24
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.24
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.24
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.24
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.24
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.24
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.24
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.24
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.24
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.24
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.24
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.23
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.23
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.23
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.23
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.23
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.23
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.23
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.23
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.22
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.22
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.22
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.22
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.21
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.21
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.21
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.21
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.21
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.21
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.21
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.21
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.21
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.2
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.2
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.2
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.2
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.2
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.2
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.2
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.2
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.2
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.19
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.19
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.19
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.19
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.19
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.19
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.19
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.18
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.18
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.18
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.18
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.18
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.18
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.18
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.18
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.18
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.18
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.18
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.17
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.17
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.17
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.17
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.17
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.17
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.17
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.17
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.16
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.16
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.16
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.16
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.16
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.16
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.16
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.16
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.15
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.15
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.15
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.15
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.15
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.15
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.15
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.15
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.14
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.14
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.14
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.14
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.14
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.14
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.14
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.14
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.13
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.13
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.13
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.13
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.13
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.13
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.13
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.12
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.12
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.12
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.12
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.12
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.11
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.11
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.11
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.11
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.11
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.1
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.1
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.1
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.1
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.1
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.1
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.1
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.1
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.09
KOG0589	426	consensus Serine/threonine protein kinase [General	99.09
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.09
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.09
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.09
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.09
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.09
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.09
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.08
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.08
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.08
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.07
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.07
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.06
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.06
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.06
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.05
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.05
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.05
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.05
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.05
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.05
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.05
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.04
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.04
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.04
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.03
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.03
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.03
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.03
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.03
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.02
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.02
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.02
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.02
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.02
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.01
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.01
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.01
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.01
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.01
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.99
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.99
KOG3653	534	consensus Transforming growth factor beta/activin	98.99
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.99
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.98
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.98
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.98
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.98
PLN00009	294	cyclin-dependent kinase A; Provisional	98.98
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.98
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.98
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.97
PTZ00283	496	serine/threonine protein kinase; Provisional	98.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.96
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.96
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.96
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.96
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.96
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	98.96
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.95
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.95
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.95
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.95
PHA03212	391	serine/threonine kinase US3; Provisional	98.95
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.94
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.94
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.94
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.92
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.92
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.92
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.92
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.92
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.91
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.91
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.91
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.91
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.91
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.91
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.9
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.9
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.89
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.89
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.89
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.87
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.87
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.87
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.87
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.86
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.86
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.85
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.85
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.85
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.84
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.84
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.83
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.83
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.82
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.82
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.82
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.81
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.81
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.8
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.8
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.8
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.79
PHA03211	461	serine/threonine kinase US3; Provisional	98.79
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.76
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.76
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.76
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.75
PHA03209	357	serine/threonine kinase US3; Provisional	98.74
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.74
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.73
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.73
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.73
PRK09188	365	serine/threonine protein kinase; Provisional	98.73
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.73
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.73
PRK10345	210	hypothetical protein; Provisional	98.71
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.71
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.7
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.7
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.68
PTZ00036	440	glycogen synthase kinase; Provisional	98.67
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.65
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.65
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.64
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.64
PHA03207	392	serine/threonine kinase US3; Provisional	98.62
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.61
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.61
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.6
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.6
KOG0584	632	consensus Serine/threonine protein kinase [General	98.59
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.57
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.56
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.56
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.51
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.51
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.5
PRK14879	211	serine/threonine protein kinase; Provisional	98.49
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.47
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.39
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.36
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.36
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.35
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.33
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.32
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.32
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.31
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.28
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.23
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.21
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.16
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.14
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.14
PHA03210	501	serine/threonine kinase US3; Provisional	98.12
PTZ00284	467	protein kinase; Provisional	98.04
KOG0695	593	consensus Serine/threonine protein kinase [Signal	97.96
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.9
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	97.81
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.79
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.78
KOG1152	772	consensus Signal transduction serine/threonine kin	97.77
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	97.75
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.73
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.73
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.73
smart00090	237	RIO RIO-like kinase.	97.57
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	97.53
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.49
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.45
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.44
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.42
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.41
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.39
PRK12274	218	serine/threonine protein kinase; Provisional	97.21
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	97.14
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.1
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.09
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.08
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	96.84
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.83
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	96.76
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	96.59
KOG1243	690	consensus Protein kinase [General function predict	96.39
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	96.23
COG0515	384	SPS1 Serine/threonine protein kinase [General func	96.23
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	96.05
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	95.64
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	95.63
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	95.45
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.28
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	94.91
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	94.9
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	94.7
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.36
COG0661	517	AarF Predicted unusual protein kinase [General fun	93.51
PHA02882	294	putative serine/threonine kinase; Provisional	93.27
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	88.54
KOG1235	538	consensus Predicted unusual protein kinase [Genera	85.66
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	84.51
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	81.89
PLN02876	822	acyl-CoA dehydrogenase	80.22

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.80  E-value=9.6e-19  Score=94.16  Aligned_cols=80  Identities=24%  Similarity=0.349  Sum_probs=71.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      |++||+|+. .++..||+|++...  ..+..+.+..|+++++.++|+||+.+.+++..++.+++|||||.+|+|..+|++
T Consensus        23 favVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~  102 (429)
T KOG0595|consen   23 FAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRR  102 (429)
T ss_pred             eEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHH
Confidence            789999994 46889999999754  445666789999999999999999999999999999999999999999999997


Q ss_pred             CCC
Q 038959           78 RSF   80 (86)
Q Consensus        78 ~~~   80 (86)
                      ...
T Consensus       103 ~~~  105 (429)
T KOG0595|consen  103 RGR  105 (429)
T ss_pred             cCC
Confidence            754

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=1.8e-18  Score=93.76  Aligned_cols=85  Identities=44%  Similarity=0.738  Sum_probs=71.5

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCC-ceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP-ERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||+|.++++..+|||.+.........+|.+|+..+..++|+|++++.|+|...+ ..++++||+++|+|.+++....
T Consensus        88 fg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~  167 (361)
T KOG1187|consen   88 FGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKK  167 (361)
T ss_pred             CeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCC
Confidence            789999998888999999887544321345999999999999999999999999888 5999999999999999998765


Q ss_pred             --CCCCcc
Q 038959           80 --FSTFET   85 (86)
Q Consensus        80 --~~~~~~   85 (86)
                        ...|..
T Consensus       168 ~~~L~W~~  175 (361)
T KOG1187|consen  168 GEPLDWET  175 (361)
T ss_pred             CCCCCHHH
Confidence              334543

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.71  E-value=1.7e-16  Score=87.41  Aligned_cols=78  Identities=26%  Similarity=0.353  Sum_probs=70.2

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.|+.|.+.....+|+|.+.... ...+.|..|+.+|+.+.|++|+++++.|..+.+++|++|||+.|+|.++++.+.
T Consensus       219 FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~  296 (468)
T KOG0197|consen  219 FGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTRE  296 (468)
T ss_pred             cceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcC
Confidence            899999999777789999998653 455688899999999999999999999999889999999999999999999743

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.67  E-value=1.2e-15  Score=82.88  Aligned_cols=78  Identities=28%  Similarity=0.468  Sum_probs=66.3

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCccc--HHHHHHHHHHHhcCCCCcccceeeeeeeCC-ceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQG--IVEFKNEAKVIAKPQHTNIVRLIGCSLHGP-ERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||+||+|.+.....+|+|.+.......  ...|.+|+.++..++|||++.+.|.|..+. ..++++||+++|+|..++.+
T Consensus        54 ~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~  133 (362)
T KOG0192|consen   54 FGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHK  133 (362)
T ss_pred             ceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhh
Confidence            789999998654459999997543222  458999999999999999999999998777 79999999999999999987


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus       134 ~  134 (362)
T KOG0192|consen  134 K  134 (362)
T ss_pred             c
Confidence            4

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.66  E-value=9.4e-17  Score=92.35  Aligned_cols=80  Identities=33%  Similarity=0.497  Sum_probs=69.2

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||+||.++..      ....||||.++..... ..++|.+|+..+..++|+||++++|+|...++.++++|||..|+|.+
T Consensus       499 FGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~e  578 (774)
T KOG1026|consen  499 FGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHE  578 (774)
T ss_pred             hhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHH
Confidence            7999998732      3458999999865444 66799999999999999999999999999999999999999999999


Q ss_pred             hhccCCC
Q 038959           74 FIFGRSF   80 (86)
Q Consensus        74 ~l~~~~~   80 (86)
                      |++....
T Consensus       579 FLra~sP  585 (774)
T KOG1026|consen  579 FLRARSP  585 (774)
T ss_pred             HHHhhCC
Confidence            9986533

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1.4e-16  Score=90.90  Aligned_cols=81  Identities=28%  Similarity=0.357  Sum_probs=71.0

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.|.|+ ...+||||.++... ...++|+.|..+|+.++|+|++++.++|-...+.+++.|||++|+|.++++...
T Consensus       280 YGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecn  358 (1157)
T KOG4278|consen  280 YGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECN  358 (1157)
T ss_pred             ccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhc
Confidence            6889999976 57899999997543 445689999999999999999999999999999999999999999999998765


Q ss_pred             CCC
Q 038959           80 FST   82 (86)
Q Consensus        80 ~~~   82 (86)
                      ..+
T Consensus       359 r~e  361 (1157)
T KOG4278|consen  359 RSE  361 (1157)
T ss_pred             hhh
Confidence            443

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.60  E-value=2.7e-15  Score=84.75  Aligned_cols=80  Identities=23%  Similarity=0.371  Sum_probs=72.1

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccH-HHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGI-VEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.|..+....+..||+|.+++....+. .+|.+|+.++.+++|||++.+.+.|...+++++++||+++|+|.+++..+.
T Consensus       551 FGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~ahe  630 (807)
T KOG1094|consen  551 FGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHE  630 (807)
T ss_pred             cceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhcc
Confidence            7888888877789999999997766655 689999999999999999999999999999999999999999999998764


Q ss_pred             C
Q 038959           80 F   80 (86)
Q Consensus        80 ~   80 (86)
                      .
T Consensus       631 a  631 (807)
T KOG1094|consen  631 L  631 (807)
T ss_pred             C
Confidence            3

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.60  E-value=2.9e-15  Score=86.66  Aligned_cols=78  Identities=28%  Similarity=0.428  Sum_probs=69.2

Q ss_pred             CCceEEEEcC----CCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP----DGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.|+.|+++    ....||+|.++.. ..+.+.+|+.|..+|.+.+||||+.+.++.-...+++++.|||++|.|..|+
T Consensus       642 FGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFL  721 (996)
T KOG0196|consen  642 FGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFL  721 (996)
T ss_pred             ccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHH
Confidence            8999999864    3568999999854 4556678999999999999999999999999999999999999999999999


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      +.+
T Consensus       722 R~~  724 (996)
T KOG0196|consen  722 RQN  724 (996)
T ss_pred             hhc
Confidence            854

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.59  E-value=1.5e-14  Score=85.82  Aligned_cols=82  Identities=29%  Similarity=0.423  Sum_probs=69.6

Q ss_pred             CCceEEEEcCC--C----CEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLPD--G----QVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~~--~----~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.|.+.+  +    ..||+|.+... ......+|++|..+|+.++|||+++++|.|......++++|||++|+|..
T Consensus       705 FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~s  784 (1025)
T KOG1095|consen  705 FGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLS  784 (1025)
T ss_pred             ccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHH
Confidence            89999998542  2    24889998744 34556689999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCC
Q 038959           74 FIFGRSFST   82 (86)
Q Consensus        74 ~l~~~~~~~   82 (86)
                      +|+..+...
T Consensus       785 flr~~r~~~  793 (1025)
T KOG1095|consen  785 FLRESRPAP  793 (1025)
T ss_pred             HHHhccccc
Confidence            999876543

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.58  E-value=1.8e-14  Score=80.10  Aligned_cols=80  Identities=33%  Similarity=0.458  Sum_probs=67.3

Q ss_pred             CCceEEEEcCC--C--CE-EEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLPD--G--QV-IAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~~--~--~~-~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.|+.|.+..  +  .. ||+|......   ......+.+|..+++.++|+|++.++|.+....++++++|++++|+|.
T Consensus       170 FGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~  249 (474)
T KOG0194|consen  170 FGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLD  249 (474)
T ss_pred             ccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHH
Confidence            89999999542  2  23 8999987522   233457999999999999999999999999999999999999999999


Q ss_pred             hhhccCCC
Q 038959           73 FFIFGRSF   80 (86)
Q Consensus        73 ~~l~~~~~   80 (86)
                      ++++..+.
T Consensus       250 ~~L~k~~~  257 (474)
T KOG0194|consen  250 DYLKKNKK  257 (474)
T ss_pred             HHHHhCCC
Confidence            99997654

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=3.4e-14  Score=77.38  Aligned_cols=81  Identities=20%  Similarity=0.220  Sum_probs=66.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc-------ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS-------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.|..+. .+++..+|+|++.....       .......+|+.+|+.++||+++.+++.+..+...++++||+.+|+|.
T Consensus       185 fg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLf  264 (475)
T KOG0615|consen  185 FGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELF  264 (475)
T ss_pred             eeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHH
Confidence            56777777 56899999999964321       11224579999999999999999999999999999999999999999


Q ss_pred             hhhccCCCC
Q 038959           73 FFIFGRSFS   81 (86)
Q Consensus        73 ~~l~~~~~~   81 (86)
                      +++-.....
T Consensus       265 d~vv~nk~l  273 (475)
T KOG0615|consen  265 DKVVANKYL  273 (475)
T ss_pred             HHHHhcccc
Confidence            998766543

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.56  E-value=5.1e-14  Score=79.22  Aligned_cols=78  Identities=22%  Similarity=0.238  Sum_probs=69.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      |..+|.++ ..+|..+|+|++...   .....+.+.+|+.+.+.++||||++++..+++.+.++++.|+|..|+|..+++
T Consensus        31 FA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~K  110 (592)
T KOG0575|consen   31 FARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLK  110 (592)
T ss_pred             ceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHH
Confidence            67789998 478999999999742   34556789999999999999999999999999999999999999999999998


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       111 rr  112 (592)
T KOG0575|consen  111 RR  112 (592)
T ss_pred             hc
Confidence            54

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.50  E-value=5.3e-14  Score=77.27  Aligned_cols=80  Identities=14%  Similarity=0.213  Sum_probs=67.4

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHH---HHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIV---EFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.|.++. ...|..||+|.++...+++.+   .+.+|+.+|+.+.||||+.++.++++.+.+.++|||..+|+|++++.
T Consensus        66 YGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiS  145 (668)
T KOG0611|consen   66 YGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYIS  145 (668)
T ss_pred             ccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHH
Confidence            46666665 356889999999866555544   56789999999999999999999999999999999999999999997


Q ss_pred             cCCC
Q 038959           77 GRSF   80 (86)
Q Consensus        77 ~~~~   80 (86)
                      ....
T Consensus       146 er~~  149 (668)
T KOG0611|consen  146 ERGS  149 (668)
T ss_pred             Hhcc
Confidence            6533

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.48  E-value=2.3e-13  Score=76.84  Aligned_cols=83  Identities=18%  Similarity=0.206  Sum_probs=68.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||+||-|+ .++|+.||+|.++...  .+....+.+|+.+++.++||.++.+..+++.++.++++||-+ .|++.+.|.+
T Consensus       577 FG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~GDMLEMILS  655 (888)
T KOG4236|consen  577 FGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HGDMLEMILS  655 (888)
T ss_pred             ceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cchHHHHHHH
Confidence            89999999 5689999999998543  233457889999999999999999999999999999999999 5577777766


Q ss_pred             CCCCCCc
Q 038959           78 RSFSTFE   84 (86)
Q Consensus        78 ~~~~~~~   84 (86)
                      .+...++
T Consensus       656 sEkgRL~  662 (888)
T KOG4236|consen  656 SEKGRLP  662 (888)
T ss_pred             hhcccch
Confidence            5554443

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.45  E-value=1.6e-12  Score=69.86  Aligned_cols=76  Identities=20%  Similarity=0.235  Sum_probs=65.9

Q ss_pred             CceEEEEc-CCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCc-eEEEEeccCCCChhhhhcc
Q 038959            2 SSLLQGKL-PDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPE-RILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         2 g~v~~~~~-~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~l~~e~~~~g~l~~~l~~   77 (86)
                      |+|++++. .++..+|.|.+... .......+.+|+.++...+||+++.+++.+..+.. +++.||||.+|+|..++..
T Consensus        93 G~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~  171 (364)
T KOG0581|consen   93 GTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKR  171 (364)
T ss_pred             cEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhh
Confidence            78999984 47889999999633 44556689999999999999999999999998885 9999999999999998874

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.43  E-value=1e-12  Score=70.47  Aligned_cols=82  Identities=22%  Similarity=0.298  Sum_probs=69.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||+|+..+ .++++.+|+|+++....   +.......|..++..++||.|++++..+.+.+.++++++|+.||+|..+|.
T Consensus        38 fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~  117 (357)
T KOG0598|consen   38 FGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQ  117 (357)
T ss_pred             CceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHH
Confidence            78999888 55799999999975422   334567888999999999999999999999999999999999999999998


Q ss_pred             cC-CCCC
Q 038959           77 GR-SFST   82 (86)
Q Consensus        77 ~~-~~~~   82 (86)
                      ++ .+.+
T Consensus       118 ~eg~F~E  124 (357)
T KOG0598|consen  118 REGRFSE  124 (357)
T ss_pred             hcCCcch
Confidence            54 4443

>PHA02988 hypothetical protein; Provisional

Probab=99.43  E-value=4e-12  Score=67.29  Aligned_cols=79  Identities=16%  Similarity=0.227  Sum_probs=63.2

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCccc---HHHHHHHHHHHhcCCCCcccceeeeeee----CCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQG---IVEFKNEAKVIAKPQHTNIVRLIGCSLH----GPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~l~~e~~~~g~l~~   73 (86)
                      ++.||+|.+ ++..+|+|.++......   ...+.+|+..+..+.|+|++++.+.+..    ....++++||+++|+|.+
T Consensus        33 ~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~  111 (283)
T PHA02988         33 QNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLRE  111 (283)
T ss_pred             ceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHH
Confidence            467888887 57889999987433222   3467799999999999999999998765    456889999999999999


Q ss_pred             hhccCCC
Q 038959           74 FIFGRSF   80 (86)
Q Consensus        74 ~l~~~~~   80 (86)
                      ++.+.+.
T Consensus       112 ~l~~~~~  118 (283)
T PHA02988        112 VLDKEKD  118 (283)
T ss_pred             HHhhCCC
Confidence            9976543

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.43  E-value=1.3e-12  Score=68.07  Aligned_cols=78  Identities=24%  Similarity=0.379  Sum_probs=66.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcc--cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQ--GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++. ..+|+.||+|.++.....  .....++|+..++.++|+|++.+.+.+...+.+.+++||++. +|...|++
T Consensus        15 ~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vIkd   93 (318)
T KOG0659|consen   15 YGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVIKD   93 (318)
T ss_pred             eEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-cHHHHhcc
Confidence            68899999 668999999999855333  234678999999999999999999999999999999999976 89988886


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus        94 ~~   95 (318)
T KOG0659|consen   94 KN   95 (318)
T ss_pred             cc
Confidence            53

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.42  E-value=8.2e-13  Score=69.71  Aligned_cols=84  Identities=20%  Similarity=0.245  Sum_probs=70.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||+|...+ ..++..+|+|.++...   -+..+...+|-.+++.+.||.++.+.+.+.....++++|||.++|+|+++++
T Consensus        57 FGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lr  136 (355)
T KOG0616|consen   57 FGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLR  136 (355)
T ss_pred             cceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHH
Confidence            78899888 4468899999997432   2344567888999999999999999999999999999999999999999998


Q ss_pred             c-CCCCCCc
Q 038959           77 G-RSFSTFE   84 (86)
Q Consensus        77 ~-~~~~~~~   84 (86)
                      + +++.+..
T Consensus       137 k~~rF~e~~  145 (355)
T KOG0616|consen  137 KSGRFSEPH  145 (355)
T ss_pred             hcCCCCchh
Confidence            6 4556543

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.41  E-value=3.3e-12  Score=70.12  Aligned_cols=78  Identities=19%  Similarity=0.180  Sum_probs=67.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .+|..+|+|.+......   +...+.+|+.+++.+. |||++.+.+.+.....+++++|++.+|+|++.+
T Consensus        48 Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i  127 (382)
T KOG0032|consen   48 FGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRI  127 (382)
T ss_pred             ceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHH
Confidence            788999984 46999999999754332   3458899999999997 999999999999999999999999999999988


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       128 ~~~  130 (382)
T KOG0032|consen  128 VKK  130 (382)
T ss_pred             HHc
Confidence            754

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.41  E-value=7.9e-12  Score=65.15  Aligned_cols=79  Identities=18%  Similarity=0.267  Sum_probs=68.5

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.+....+..+++|.+..........+..++..++.+.|+|++++.+.+......++++|++++++|.+++.+..
T Consensus        19 ~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~   97 (261)
T cd05148          19 FGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPE   97 (261)
T ss_pred             CccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCC
Confidence            6889999866688899999876554456678889999999999999999999999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.41  E-value=3.6e-13  Score=69.19  Aligned_cols=80  Identities=19%  Similarity=0.202  Sum_probs=66.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.++. ++.-.+|+|++....   ......+.+|+.+-+.+.||||+.+++.+++...+++++||.+.|+++..+.
T Consensus        35 FG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~  114 (281)
T KOG0580|consen   35 FGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQ  114 (281)
T ss_pred             cccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHH
Confidence            899999994 467788999985322   1223467888888889999999999999999999999999999999999998


Q ss_pred             cCCC
Q 038959           77 GRSF   80 (86)
Q Consensus        77 ~~~~   80 (86)
                      +.+.
T Consensus       115 ~~~~  118 (281)
T KOG0580|consen  115 EGRM  118 (281)
T ss_pred             hccc
Confidence            5443

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.40  E-value=2.2e-12  Score=70.63  Aligned_cols=78  Identities=21%  Similarity=0.260  Sum_probs=64.7

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC----Cc-ccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR----TS-QGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~----~~-~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||+|+.+. ..++..+|+|.++..    .. ...+.+.+|+.+++.+. |||+++++..+..+...++++||+.+|+|++
T Consensus        30 fgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~  109 (370)
T KOG0583|consen   30 FGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFD  109 (370)
T ss_pred             CeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHH
Confidence            78899997 457899999977643    11 22335667999999997 9999999999999999999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++.+.
T Consensus       110 ~i~~~  114 (370)
T KOG0583|consen  110 YIVNK  114 (370)
T ss_pred             HHHHc
Confidence            99873

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.40  E-value=5.6e-12  Score=70.35  Aligned_cols=77  Identities=19%  Similarity=0.304  Sum_probs=62.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+++ ..+|..||+|.++-.  .........+|+.+++.++|+||+++.+....  ...+++|+|||+. +|.-++
T Consensus       130 yg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl  208 (560)
T KOG0600|consen  130 YGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLL  208 (560)
T ss_pred             hhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhh
Confidence            78999999 678999999999743  24445567899999999999999999998765  4789999999976 666666


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      .+.
T Consensus       209 ~~p  211 (560)
T KOG0600|consen  209 SSP  211 (560)
T ss_pred             cCC
Confidence            543

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.39  E-value=3.5e-12  Score=69.74  Aligned_cols=79  Identities=14%  Similarity=0.124  Sum_probs=64.6

Q ss_pred             CceEEEEcC-CCCEEEEEEecCCCcccH---HHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            2 SSLLQGKLP-DGQVIAVKRLSGRTSQGI---VEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         2 g~v~~~~~~-~~~~~~~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      |+||.+... ++...|+|+++.......   .....|-.+++.++||.+..++..+......+++||||+||+|+.+.++
T Consensus        91 G~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~Lrqk  170 (459)
T KOG0610|consen   91 GTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQK  170 (459)
T ss_pred             eeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhh
Confidence            789999954 568899999975432222   2356677889999999999999999999999999999999999988775


Q ss_pred             CCC
Q 038959           78 RSF   80 (86)
Q Consensus        78 ~~~   80 (86)
                      .+.
T Consensus       171 Qp~  173 (459)
T KOG0610|consen  171 QPG  173 (459)
T ss_pred             CCC
Confidence            543

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.39  E-value=3.9e-12  Score=70.20  Aligned_cols=77  Identities=21%  Similarity=0.270  Sum_probs=66.4

Q ss_pred             CceEEEE-cCCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            2 SSLLQGK-LPDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         2 g~v~~~~-~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      +.||.++ .+.+..||+|.++.... .+...+.+|+..++.++|||+++.+..+.....+.++|.||.+|++.++++..
T Consensus        40 a~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~  118 (516)
T KOG0582|consen   40 AVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTY  118 (516)
T ss_pred             eEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHH
Confidence            3588888 56789999999974432 33468899999999999999999999999999999999999999999998854

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.38  E-value=4.5e-12  Score=71.71  Aligned_cols=78  Identities=17%  Similarity=0.236  Sum_probs=65.9

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      |+.|..+. ..++..||+|.++..  .....+.+.+|+++|+.+.|||++++++..+.+..+++++||+.+|++++++..
T Consensus        69 f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~  148 (596)
T KOG0586|consen   69 FAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVK  148 (596)
T ss_pred             eEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHh
Confidence            45677776 347889999999743  333445688999999999999999999999999999999999999999999875


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus       149 ~  149 (596)
T KOG0586|consen  149 H  149 (596)
T ss_pred             c
Confidence            4

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.38  E-value=5.8e-12  Score=65.88  Aligned_cols=78  Identities=29%  Similarity=0.436  Sum_probs=63.1

Q ss_pred             CCceEEEEcC-----CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP-----DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~-----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|.+.     .+..|++|.+.... ......+..++..+..++|+|++++.+.+...+..++++|++++|+|.++
T Consensus        12 fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~   91 (259)
T PF07714_consen   12 FGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDY   91 (259)
T ss_dssp             SEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHH
T ss_pred             CcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccccccccccc
Confidence            7889999854     25578999996533 23356889999999999999999999999988889999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +.+.
T Consensus        92 L~~~   95 (259)
T PF07714_consen   92 LKSK   95 (259)
T ss_dssp             HHHT
T ss_pred             cccc
Confidence            9876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.38  E-value=1.4e-11  Score=67.61  Aligned_cols=79  Identities=13%  Similarity=0.198  Sum_probs=65.7

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++. ..++..+|+|.+....   ......+..|+.++..++|+|++++++.+...+..++++||+++|+|.+++.
T Consensus        14 ~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~   93 (381)
T cd05626          14 FGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLI   93 (381)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHH
Confidence            78999998 4578899999996432   1223467888999999999999999999999999999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      +..
T Consensus        94 ~~~   96 (381)
T cd05626          94 RME   96 (381)
T ss_pred             hcC
Confidence            543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.37  E-value=6.1e-12  Score=70.43  Aligned_cols=78  Identities=14%  Similarity=0.229  Sum_probs=65.7

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.++ ..+|..+|+|.++...   ......+..|-.++...+++++++++..+...+.++|+|||+|||++..+|.
T Consensus       154 fGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~  233 (550)
T KOG0605|consen  154 FGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLM  233 (550)
T ss_pred             ceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHH
Confidence            79999998 5689999999997432   2233467778888888899999999999999999999999999999998876


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       234 ~~  235 (550)
T KOG0605|consen  234 RK  235 (550)
T ss_pred             hc
Confidence            54

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.37  E-value=6.1e-12  Score=68.92  Aligned_cols=78  Identities=22%  Similarity=0.262  Sum_probs=63.9

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++..      .++..+|+|.++... ....+.+.+|+.++..+ .|+|++++.+.+...+..++++||+++|+|.
T Consensus        48 fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~  127 (375)
T cd05104          48 FGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLL  127 (375)
T ss_pred             cceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHH
Confidence            788998862      235589999987432 23345688899999988 8999999999999999999999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++...
T Consensus       128 ~~l~~~  133 (375)
T cd05104         128 NFLRRK  133 (375)
T ss_pred             HHHHhc
Confidence            999754

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.37  E-value=1.9e-11  Score=64.08  Aligned_cols=78  Identities=29%  Similarity=0.381  Sum_probs=64.2

Q ss_pred             CCceEEEEcC----CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP----DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.+.    .+..+++|.++... ......+..|+..+..+.|+|++++.+.+..++..++++|++++|+|.+++
T Consensus        18 fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l   97 (266)
T cd05064          18 FGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFL   97 (266)
T ss_pred             CCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHH
Confidence            7899998742    35688999987542 223346888999999999999999999998889999999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        98 ~~~  100 (266)
T cd05064          98 RKH  100 (266)
T ss_pred             HhC
Confidence            764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.37  E-value=1.1e-11  Score=68.56  Aligned_cols=78  Identities=19%  Similarity=0.228  Sum_probs=63.4

Q ss_pred             CCceEEEEc-C-----CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-P-----DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~-----~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.|.. .     .+..+|+|.+..... ...+.+.+|+.++..+. |||++++.+.+...+..++++||+++|+|.
T Consensus        50 fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~  129 (400)
T cd05105          50 FGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLV  129 (400)
T ss_pred             CceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHH
Confidence            788999873 2     134689999974332 23457889999999995 999999999998889999999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++...
T Consensus       130 ~~l~~~  135 (400)
T cd05105         130 NYLHKN  135 (400)
T ss_pred             HHHHHh
Confidence            998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.37  E-value=2.5e-11  Score=63.24  Aligned_cols=77  Identities=27%  Similarity=0.324  Sum_probs=65.0

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.+..+..+++|.+.... .....+..|+..++.++|+|++++++.+...+..++++|++++|+|.+++...
T Consensus        17 ~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~   93 (256)
T cd05114          17 FGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQR   93 (256)
T ss_pred             CceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhC
Confidence            688999987667789999876432 33457888999999999999999999998889999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.37  E-value=2.5e-11  Score=65.60  Aligned_cols=79  Identities=19%  Similarity=0.171  Sum_probs=65.6

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+... ++..+++|.+.... ......+.+|+.+++.++|+|++++++.+...+..++++||+++|+|.+++...
T Consensus        18 ~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   97 (333)
T cd06650          18 GGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA   97 (333)
T ss_pred             CEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHc
Confidence            6889999854 67888999886432 223356889999999999999999999999999999999999999999998754


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus        98 ~   98 (333)
T cd06650          98 G   98 (333)
T ss_pred             C
Confidence            3

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.36  E-value=1.8e-11  Score=66.01  Aligned_cols=79  Identities=16%  Similarity=0.166  Sum_probs=65.7

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+... ++..+|+|.+....   ......+..|+.++..+.|+|++++++.+...+..++++|++++|+|.+++.
T Consensus        31 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  110 (329)
T PTZ00263         31 FGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLR  110 (329)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHH
Confidence            6889999854 68899999986421   1233467889999999999999999999999999999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      +..
T Consensus       111 ~~~  113 (329)
T PTZ00263        111 KAG  113 (329)
T ss_pred             HcC
Confidence            653

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.36  E-value=3.4e-11  Score=63.01  Aligned_cols=78  Identities=18%  Similarity=0.208  Sum_probs=65.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.+..........+.+|+..++.+.|+|++++.+.+...+..++++|++++++|.+++...
T Consensus        22 ~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~  100 (267)
T cd06646          22 YGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVT  100 (267)
T ss_pred             CeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhc
Confidence            688999984 468889999987544344456778889999999999999999998899999999999999999988644

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=7.7e-12  Score=68.09  Aligned_cols=78  Identities=14%  Similarity=0.253  Sum_probs=64.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+....   ......+..|..++..++|+|++++++.+..++..++++|++++|+|.+++.
T Consensus        14 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~   93 (364)
T cd05599          14 FGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLM   93 (364)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHH
Confidence            688999984 468899999996321   1223456788999999999999999999999999999999999999999887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      +.
T Consensus        94 ~~   95 (364)
T cd05599          94 KK   95 (364)
T ss_pred             Hc
Confidence            54

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.36  E-value=2.1e-11  Score=63.88  Aligned_cols=78  Identities=19%  Similarity=0.231  Sum_probs=66.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.+..........+.+|+..++.+.|+|++++.+.+..++..++++|++++++|..++...
T Consensus        21 ~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   99 (268)
T cd06624          21 YGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSK   99 (268)
T ss_pred             ceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHh
Confidence            688999984 467789999887554445567889999999999999999999999999999999999999999998754

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.35  E-value=1.8e-12  Score=73.61  Aligned_cols=80  Identities=16%  Similarity=0.218  Sum_probs=67.6

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||+||+|+.+ +...||+|.++..  ..+....+.+|+.+++.++|+|++..++.++....++++.||+.+ +|+.++.+
T Consensus        15 fg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~   93 (808)
T KOG0597|consen   15 FGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQ   93 (808)
T ss_pred             cceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHh
Confidence            7899999955 6889999999743  333445688999999999999999999999999999999999976 99999886


Q ss_pred             CCCC
Q 038959           78 RSFS   81 (86)
Q Consensus        78 ~~~~   81 (86)
                      ....
T Consensus        94 d~~l   97 (808)
T KOG0597|consen   94 DGKL   97 (808)
T ss_pred             ccCC
Confidence            6543

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.35  E-value=2.9e-11  Score=65.06  Aligned_cols=79  Identities=15%  Similarity=0.156  Sum_probs=65.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.++...   ......+..|+.+++.+.|+|++.+.+.+...+..++++|++++|+|..++.
T Consensus         8 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   87 (323)
T cd05571           8 FGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS   87 (323)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHH
Confidence            788999984 578899999986421   1223456788899999999999999999999999999999999999998887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        88 ~~~   90 (323)
T cd05571          88 RER   90 (323)
T ss_pred             HcC
Confidence            543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.35  E-value=2.9e-11  Score=66.15  Aligned_cols=79  Identities=13%  Similarity=0.182  Sum_probs=65.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++. ..++..+|+|.+....   ......+.+|+.++..+.|++++++++.+...+.+++++|++++|+|.+++.
T Consensus        14 ~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~   93 (376)
T cd05598          14 FGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLI   93 (376)
T ss_pred             CeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHH
Confidence            68899998 4468899999986321   1223457789999999999999999999999999999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      +..
T Consensus        94 ~~~   96 (376)
T cd05598          94 RLG   96 (376)
T ss_pred             hcC
Confidence            643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=2.6e-11  Score=64.94  Aligned_cols=78  Identities=17%  Similarity=0.117  Sum_probs=64.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.++..   .......+..|+.++..++|+|++++.+.+...+..++++|++++|+|..++.
T Consensus         6 ~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~   85 (312)
T cd05585           6 FGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQ   85 (312)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHH
Confidence            788999984 46889999998632   12233457788899999999999999999988999999999999999999886


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        86 ~~   87 (312)
T cd05585          86 RE   87 (312)
T ss_pred             hc
Confidence            54

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.35  E-value=9.7e-12  Score=71.57  Aligned_cols=79  Identities=24%  Similarity=0.349  Sum_probs=65.9

Q ss_pred             CCceEEEEcCC---C--CEEEEEEecC-CCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLPD---G--QVIAVKRLSG-RTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~~---~--~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|.+..   |  ..||+|..+. ..+.+.+.|+.|..+|+.++||||++++|.|.. .+..++||.++.|+|-.+
T Consensus       402 FGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~~GELr~y  480 (974)
T KOG4257|consen  402 FGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAPLGELREY  480 (974)
T ss_pred             ccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEecccchhHHHH
Confidence            89999998532   2  3688999875 456678899999999999999999999999954 457899999999999999


Q ss_pred             hccCCC
Q 038959           75 IFGRSF   80 (86)
Q Consensus        75 l~~~~~   80 (86)
                      +...+.
T Consensus       481 Lq~nk~  486 (974)
T KOG4257|consen  481 LQQNKD  486 (974)
T ss_pred             HHhccc
Confidence            986643

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=3.3e-11  Score=65.01  Aligned_cols=78  Identities=14%  Similarity=0.239  Sum_probs=64.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++... ++..+|+|.+....   ......+..|+.++..+.|+|++++++.+...+..++++|++++|+|.+++.
T Consensus        14 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~   93 (333)
T cd05600          14 YGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLN   93 (333)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHH
Confidence            6889999854 68899999986321   1223457788899999999999999999999999999999999999999987


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        94 ~~   95 (333)
T cd05600          94 NL   95 (333)
T ss_pred             Hc
Confidence            54

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.34  E-value=4.5e-11  Score=62.00  Aligned_cols=78  Identities=26%  Similarity=0.401  Sum_probs=65.4

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++....+..+++|.+.... ......+..|+..+..++|+|++++.+.+......++++|++++++|..++...
T Consensus         8 ~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   86 (250)
T cd05085           8 FGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKK   86 (250)
T ss_pred             CceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhc
Confidence            688999987678889999886543 223346888999999999999999999998888999999999999999988654

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.34  E-value=1.7e-11  Score=65.93  Aligned_cols=79  Identities=15%  Similarity=0.158  Sum_probs=64.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.++...   ......+..|+..++.+.|+|++.+.+.+...+..++++||+++|+|..++.
T Consensus         8 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~   87 (323)
T cd05595           8 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS   87 (323)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHH
Confidence            688999984 468899999986421   1223456778899999999999999999998999999999999999988876


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        88 ~~~   90 (323)
T cd05595          88 RER   90 (323)
T ss_pred             HcC
Confidence            543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.34  E-value=1.8e-11  Score=67.08  Aligned_cols=78  Identities=14%  Similarity=0.217  Sum_probs=64.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.+....   ......+..|..++..++|+|++++++.+...+..++++|++++|+|.+++.
T Consensus        14 ~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~   93 (382)
T cd05625          14 FGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLI   93 (382)
T ss_pred             CEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHH
Confidence            688999984 468899999986322   1223467788899999999999999999999999999999999999999886


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      +.
T Consensus        94 ~~   95 (382)
T cd05625          94 RM   95 (382)
T ss_pred             hc
Confidence            54

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.34  E-value=4.5e-11  Score=64.51  Aligned_cols=79  Identities=20%  Similarity=0.200  Sum_probs=65.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.+... .......+.+|+..+..+.|+|++++++.+...+..++++||+++|+|.+++...
T Consensus        18 ~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   97 (331)
T cd06649          18 GGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA   97 (331)
T ss_pred             CEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHc
Confidence            678999884 46888999998743 2233456889999999999999999999999999999999999999999998754


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus        98 ~   98 (331)
T cd06649          98 K   98 (331)
T ss_pred             C
Confidence            3

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.34  E-value=4.3e-11  Score=62.17  Aligned_cols=78  Identities=26%  Similarity=0.364  Sum_probs=65.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+++|...... ......+..|+..++.+.|+|++++.+.+......++++|++++++|.+++...
T Consensus         8 ~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   87 (252)
T cd05084           8 FGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE   87 (252)
T ss_pred             CccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhC
Confidence            688999985 468889999876432 233456888999999999999999999998889999999999999999998653

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=2.6e-11  Score=66.40  Aligned_cols=79  Identities=19%  Similarity=0.212  Sum_probs=64.6

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++. ..++..+|+|.+....   ......+..|+.++..+.|+|++++++.+......++++|++++|+|..++.
T Consensus        14 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~   93 (377)
T cd05629          14 FGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLI   93 (377)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHH
Confidence            68899988 4478899999985321   1223457788899999999999999999999999999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        94 ~~~   96 (377)
T cd05629          94 KYD   96 (377)
T ss_pred             hcC
Confidence            543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.33  E-value=5.3e-11  Score=63.45  Aligned_cols=78  Identities=22%  Similarity=0.359  Sum_probs=63.0

Q ss_pred             CCceEEEEcC-----------------CCCEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEE
Q 038959            1 GSSLLQGKLP-----------------DGQVIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILV   62 (86)
Q Consensus         1 fg~v~~~~~~-----------------~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~   62 (86)
                      ||.||.+...                 ++..+|+|.+...... ....+.+|+..+..+.|+|++++++.+...+..+++
T Consensus        18 fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   97 (304)
T cd05096          18 FGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMI   97 (304)
T ss_pred             CeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEE
Confidence            6888888632                 2336899998754322 344688999999999999999999999888899999


Q ss_pred             EeccCCCChhhhhccC
Q 038959           63 YEFMPNKSLDFFIFGR   78 (86)
Q Consensus        63 ~e~~~~g~l~~~l~~~   78 (86)
                      +|++++|+|.+++...
T Consensus        98 ~e~~~~~~L~~~l~~~  113 (304)
T cd05096          98 TEYMENGDLNQFLSSH  113 (304)
T ss_pred             EecCCCCcHHHHHHhc
Confidence            9999999999988654

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=4e-11  Score=63.15  Aligned_cols=78  Identities=18%  Similarity=0.252  Sum_probs=66.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+++|.+..........+..|+..++.++|+|++++.+.+..+...++++|++++++|..++...
T Consensus        18 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   96 (280)
T cd06611          18 FGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLEL   96 (280)
T ss_pred             CceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHh
Confidence            688999985 468889999987554445567888999999999999999999999899999999999999999988753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.32  E-value=3.7e-11  Score=66.50  Aligned_cols=79  Identities=19%  Similarity=0.259  Sum_probs=64.1

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++.+.      .+..+|+|.++.... .....+..|+.++..+. |+|++++.+.+......++++||+++|+|.
T Consensus        50 fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~  129 (401)
T cd05107          50 FGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLV  129 (401)
T ss_pred             ceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHH
Confidence            7889999742      245799999974322 22346788999999997 999999999998888999999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++...+
T Consensus       130 ~~l~~~~  136 (401)
T cd05107         130 DYLHRNK  136 (401)
T ss_pred             HHHHhcc
Confidence            9997543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.32  E-value=4.3e-11  Score=67.47  Aligned_cols=77  Identities=14%  Similarity=0.113  Sum_probs=62.5

Q ss_pred             CCceEEEEc-CC-CCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PD-GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .+ +..+++|.+..........+..|+.++..++|+|++++++.+...+..++++||+++|+|.+++.+
T Consensus        80 ~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~  158 (478)
T PTZ00267         80 TTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQ  158 (478)
T ss_pred             CcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHH
Confidence            577888873 34 667888876544434445677899999999999999999999999999999999999999987754

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.32  E-value=8.3e-11  Score=62.60  Aligned_cols=78  Identities=21%  Similarity=0.293  Sum_probs=66.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++. ..++..+++|.+........+.+..|+.+++.+.|+|++++.+.+..+...++++|++++++|.+++.+.
T Consensus        33 ~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  111 (296)
T cd06654          33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET  111 (296)
T ss_pred             CeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc
Confidence            57899998 4468899999987544445567888999999999999999999998889999999999999999988654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=1.5e-11  Score=65.33  Aligned_cols=79  Identities=15%  Similarity=0.129  Sum_probs=65.2

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++... ++..+|+|.+....   ......+.+|+.+++.+.|+|++++.+.+......++++|++++|+|.+++.
T Consensus        14 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   93 (291)
T cd05612          14 FGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLR   93 (291)
T ss_pred             CeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHH
Confidence            6889999844 68899999986322   1233467789999999999999999999888899999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        94 ~~~   96 (291)
T cd05612          94 NSG   96 (291)
T ss_pred             HcC
Confidence            543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.32  E-value=3.7e-11  Score=64.84  Aligned_cols=79  Identities=15%  Similarity=0.172  Sum_probs=64.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+. ..++..+|+|.+....   ......+..|+.+++.+.|++++++.+.+...+..++++||+++|+|...+.
T Consensus         8 ~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~   87 (328)
T cd05593           8 FGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLS   87 (328)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHH
Confidence            68899998 4468899999996431   1233467788899999999999999999999999999999999999998876


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        88 ~~~   90 (328)
T cd05593          88 RER   90 (328)
T ss_pred             hcC
Confidence            543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.32  E-value=5.6e-11  Score=64.01  Aligned_cols=78  Identities=21%  Similarity=0.226  Sum_probs=63.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      |+.||.+.. .++..+|+|.++....  .....+..|+.+++.++|+|++++.+.+..++..++++|++++|+|.+++..
T Consensus        13 ~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   92 (327)
T cd08227          13 LMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT   92 (327)
T ss_pred             eEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHh
Confidence            457888874 4789999999874322  2234566788899999999999999999999999999999999999999865


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        93 ~   93 (327)
T cd08227          93 H   93 (327)
T ss_pred             h
Confidence            3

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.31  E-value=7.7e-11  Score=61.51  Aligned_cols=77  Identities=26%  Similarity=0.289  Sum_probs=64.5

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.+..+..+++|.+.... .....+..|+..+..++|+|++++++.+...+..++++|++++|+|.+++.+.
T Consensus        17 ~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~   93 (256)
T cd05113          17 FGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREH   93 (256)
T ss_pred             cceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhc
Confidence            578999886666679999887433 33457888999999999999999999998888899999999999999998754

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.31  E-value=9e-11  Score=61.25  Aligned_cols=77  Identities=25%  Similarity=0.305  Sum_probs=65.3

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+....+..+++|.+.... ...+.+..|+.+++.+.|+|++++.+.+...+..++++|++++++|.+++.+.
T Consensus        19 ~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   95 (261)
T cd05072          19 FGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSD   95 (261)
T ss_pred             CceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHh
Confidence            688999987677789999876432 23457888999999999999999999998888999999999999999998754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.31  E-value=4.5e-11  Score=65.22  Aligned_cols=79  Identities=14%  Similarity=0.217  Sum_probs=64.7

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+. ..++..+|+|.++...   ......+..|..++..++|++++++++.+......++++||+++|+|.+++.
T Consensus        14 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~   93 (363)
T cd05628          14 FGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLM   93 (363)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHH
Confidence            68899998 4468899999986321   1223456778889999999999999999999999999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        94 ~~~   96 (363)
T cd05628          94 KKD   96 (363)
T ss_pred             hcC
Confidence            543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.31  E-value=8.9e-11  Score=62.51  Aligned_cols=78  Identities=22%  Similarity=0.296  Sum_probs=66.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++. ...+..+++|.+........+.+..|+..++.++|+|++++.+.+..+...++++|++++++|.+++.+.
T Consensus        32 ~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  110 (297)
T cd06656          32 SGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET  110 (297)
T ss_pred             CeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC
Confidence            57899998 4578899999997544444566788889999999999999999999899999999999999999988653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.30  E-value=8.5e-11  Score=62.87  Aligned_cols=78  Identities=22%  Similarity=0.190  Sum_probs=64.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.+.... ......+.+|+.++..++|+|++++++.+..++.+++++||+++++|.+++...
T Consensus        14 ~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~   93 (308)
T cd06615          14 GGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA   93 (308)
T ss_pred             CeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc
Confidence            678999884 467788889886432 223346788999999999999999999999999999999999999999998754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.30  E-value=3.3e-11  Score=63.49  Aligned_cols=65  Identities=22%  Similarity=0.353  Sum_probs=53.3

Q ss_pred             EEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959           14 VIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus        14 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      .+++|.++.........+..+...++.+.|+|++++++.+......++++||+++|+|..++...
T Consensus        46 ~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~  110 (274)
T cd05076          46 RVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE  110 (274)
T ss_pred             eEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhc
Confidence            57888876443333446777888888999999999999999889999999999999999888653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=6.4e-11  Score=62.70  Aligned_cols=78  Identities=21%  Similarity=0.249  Sum_probs=63.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.+......   ....+.+|+.+++.++|++++.+.+.+..++..++++|++++|+|.+++.
T Consensus        13 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   92 (285)
T cd05605          13 FGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY   92 (285)
T ss_pred             CeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHH
Confidence            688999884 46889999998643221   22346779999999999999999999988889999999999999998876


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        93 ~~   94 (285)
T cd05605          93 NM   94 (285)
T ss_pred             hc
Confidence            43

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.30  E-value=7.4e-11  Score=61.88  Aligned_cols=78  Identities=24%  Similarity=0.313  Sum_probs=63.1

Q ss_pred             CCceEEEEcC---CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP---DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~---~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||+|...   .+..+++|.++.... .....+..|+..++.++|+|++++.+.+......++++||+++|+|.+++.
T Consensus         8 ~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~   87 (269)
T cd05087           8 FGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLR   87 (269)
T ss_pred             CceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHH
Confidence            7889999743   345788998864332 233467889999999999999999999988888999999999999999987


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      +.
T Consensus        88 ~~   89 (269)
T cd05087          88 SC   89 (269)
T ss_pred             Hh
Confidence            54

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.30  E-value=1.4e-10  Score=60.62  Aligned_cols=78  Identities=23%  Similarity=0.279  Sum_probs=65.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||++....+..+++|.++... .....+..|+..++.++|+|++++.+.+...+..++++|++++++|.+++.+..
T Consensus        19 ~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~   96 (261)
T cd05068          19 FGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGA   96 (261)
T ss_pred             CccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccC
Confidence            578999886667789999987543 334568889999999999999999999988899999999999999999987644

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.29  E-value=7.6e-11  Score=64.58  Aligned_cols=79  Identities=22%  Similarity=0.146  Sum_probs=64.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.+...   .......+..|+.+++.++|+|++.+.+.+......++++|++++|+|..++.
T Consensus        56 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~  135 (370)
T cd05596          56 FGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMS  135 (370)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHH
Confidence            688999884 46889999998632   11223356778889999999999999999999999999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       136 ~~~  138 (370)
T cd05596         136 NYD  138 (370)
T ss_pred             hcC
Confidence            543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.29  E-value=8.7e-11  Score=63.76  Aligned_cols=79  Identities=18%  Similarity=0.174  Sum_probs=64.0

Q ss_pred             CCceEEEEcC-C-CCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-D-GQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~-~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+... . +..+|+|.+...   .......+..|..++..++|+|++++++.+...+..++++||+++|+|.+++
T Consensus        43 ~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i  122 (340)
T PTZ00426         43 FGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFL  122 (340)
T ss_pred             CeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHH
Confidence            6889999743 3 357999988532   1223446778999999999999999999999999999999999999999998


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      .+..
T Consensus       123 ~~~~  126 (340)
T PTZ00426        123 RRNK  126 (340)
T ss_pred             HHcC
Confidence            7654

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.29  E-value=7.2e-12  Score=72.73  Aligned_cols=77  Identities=27%  Similarity=0.339  Sum_probs=65.5

Q ss_pred             CCceEEEEcC--CCC--EEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP--DGQ--VIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~--~~~--~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.|++|.|.  .|.  .||||+++..... ...+|++|+.+|..++|++++.+++.+.. ....+++|+++.|+|.+.+
T Consensus       123 FgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrL  201 (1039)
T KOG0199|consen  123 FGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRL  201 (1039)
T ss_pred             eeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHH
Confidence            8899999875  343  6899999865443 55689999999999999999999999876 6688999999999999999


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      +..
T Consensus       202 rka  204 (1039)
T KOG0199|consen  202 RKA  204 (1039)
T ss_pred             hhc
Confidence            873

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.29  E-value=1.4e-10  Score=60.67  Aligned_cols=78  Identities=18%  Similarity=0.236  Sum_probs=65.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+++|.++.........+..|+..+..++|+|++++.+.+...+..++++|++++++|.+++...
T Consensus        22 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  100 (267)
T cd06645          22 YGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVT  100 (267)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhc
Confidence            678999884 468899999987544344446778888999999999999999999999999999999999999988654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.29  E-value=1.2e-10  Score=62.01  Aligned_cols=78  Identities=22%  Similarity=0.312  Sum_probs=65.9

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+. ..++..+++|.+..........+..|+..++.++|+|++++.+.+......++++|++++++|..++.+.
T Consensus        32 ~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  110 (296)
T cd06655          32 SGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET  110 (296)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc
Confidence            57889887 4578899999987544444567788999999999999999999998889999999999999999988654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.29  E-value=8e-11  Score=63.39  Aligned_cols=79  Identities=16%  Similarity=0.156  Sum_probs=64.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+. ..++..+|+|.+....   ......+..|...+..+.|++++.+.+.+...+..++++||+++|+|..++.
T Consensus         8 ~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~   87 (325)
T cd05594           8 FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS   87 (325)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHH
Confidence            78899988 4478899999986421   1223456778888899999999999999998999999999999999998886


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        88 ~~~   90 (325)
T cd05594          88 RER   90 (325)
T ss_pred             hcC
Confidence            543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.29  E-value=1.2e-10  Score=61.50  Aligned_cols=78  Identities=26%  Similarity=0.258  Sum_probs=64.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. +++..+++|.+.... ......+.+|+.++..++|+|++++.+.+...+..++++||+++++|..++...
T Consensus        18 ~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   97 (284)
T cd06620          18 GGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKG   97 (284)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhc
Confidence            678999884 468889999876432 233457888999999999999999999999999999999999999999887654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.29  E-value=5.1e-11  Score=63.92  Aligned_cols=79  Identities=24%  Similarity=0.300  Sum_probs=64.6

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCC--ceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP--ERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+... +|...|+|..........+.+.+|+.++..+.|++|++..+.....+  ...+++||+++|+|.+++.+
T Consensus        30 ~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~  109 (313)
T KOG0198|consen   30 FGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKR  109 (313)
T ss_pred             ceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHH
Confidence            7889999854 58899999987542222556899999999999999999999754433  68899999999999999987


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus       110 ~g  111 (313)
T KOG0198|consen  110 YG  111 (313)
T ss_pred             cC
Confidence            64

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.28  E-value=2.1e-10  Score=59.86  Aligned_cols=78  Identities=24%  Similarity=0.268  Sum_probs=65.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||++....+..+++|.+.... .....+..|+..++.+.|+|++++++.+......++++|++++++|.+++.+..
T Consensus        19 ~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~   96 (261)
T cd05034          19 FGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGE   96 (261)
T ss_pred             ceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccc
Confidence            578999886667789999987533 344578889999999999999999999988888999999999999999987643

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.28  E-value=1.3e-10  Score=62.74  Aligned_cols=78  Identities=21%  Similarity=0.273  Sum_probs=62.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.++...   ......+..|..++..+ +|+|++++++.+...+..++++|++++|+|..++
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~   87 (329)
T cd05588           8 YAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHM   87 (329)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHH
Confidence            688999984 468899999997432   12233567788888777 7999999999999999999999999999999887


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        88 ~~~   90 (329)
T cd05588          88 QRQ   90 (329)
T ss_pred             HHc
Confidence            654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.28  E-value=1.1e-10  Score=62.04  Aligned_cols=78  Identities=23%  Similarity=0.287  Sum_probs=65.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.+..........+..|+..++.++|+|++++.+.+...+..++++|++++++|.+++.+.
T Consensus        32 ~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  110 (293)
T cd06647          32 SGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET  110 (293)
T ss_pred             CeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc
Confidence            678999984 467889999986444344557788899999999999999999998889999999999999999988754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.28  E-value=7.4e-11  Score=62.34  Aligned_cols=76  Identities=21%  Similarity=0.269  Sum_probs=62.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+......   ....+..|+.+++.++|++++.+.+.+......++++|++++|+|...+.
T Consensus         6 ~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~   85 (280)
T cd05608           6 FGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIY   85 (280)
T ss_pred             ceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHH
Confidence            789999984 46889999998643221   22356778889999999999999999988889999999999999988774

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.28  E-value=6.6e-12  Score=72.20  Aligned_cols=80  Identities=21%  Similarity=0.293  Sum_probs=66.6

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeee------CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH------GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||+|+ ..+|..+|+|..+... ....+.+-+|+.+++.+.|+||++..+.-+.      .....+++|||.+|+|.
T Consensus        26 ~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~  105 (732)
T KOG4250|consen   26 FGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLR  105 (732)
T ss_pred             cceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHH
Confidence            78899999 5689999999998543 3456678899999999999999999876543      34578999999999999


Q ss_pred             hhhccCCC
Q 038959           73 FFIFGRSF   80 (86)
Q Consensus        73 ~~l~~~~~   80 (86)
                      ..+.+.+.
T Consensus       106 ~~L~~PEN  113 (732)
T KOG4250|consen  106 KVLNSPEN  113 (732)
T ss_pred             HHhcCccc
Confidence            99998755

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.27  E-value=5.1e-13  Score=70.32  Aligned_cols=76  Identities=18%  Similarity=0.245  Sum_probs=63.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceee-eeeeC-CceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHG-PERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~-~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+.. ..+|..+|.|-++-.  ..+..+.+..|+.+++.+.||||++..+ .+... ..+.++||++..|+|...|
T Consensus        32 Fg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmI  111 (375)
T KOG0591|consen   32 FGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMI  111 (375)
T ss_pred             chheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHH
Confidence            79999998 678999999988733  2344568999999999999999999987 45444 4488999999999999998


Q ss_pred             c
Q 038959           76 F   76 (86)
Q Consensus        76 ~   76 (86)
                      +
T Consensus       112 k  112 (375)
T KOG0591|consen  112 K  112 (375)
T ss_pred             H
Confidence            7

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.27  E-value=9.5e-11  Score=62.05  Aligned_cols=77  Identities=21%  Similarity=0.261  Sum_probs=63.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.+.....   .....+.+|+.++..+.|++++.+.+.+...+..++++|++++|+|..++.
T Consensus        13 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~   92 (285)
T cd05631          13 FGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY   92 (285)
T ss_pred             CEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHH
Confidence            688999984 5788999999864321   122356789999999999999999999988899999999999999988775


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus        93 ~   93 (285)
T cd05631          93 N   93 (285)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.27  E-value=1.8e-10  Score=60.06  Aligned_cols=77  Identities=27%  Similarity=0.318  Sum_probs=63.9

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+....+..+++|.+.... .....+..|+..++.+.|+|++++.+.+...+..++++|++++++|.+++...
T Consensus        17 ~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   93 (256)
T cd05059          17 FGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRER   93 (256)
T ss_pred             CceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhc
Confidence            578999886666788999886432 23446778999999999999999999998888999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.27  E-value=1.2e-10  Score=63.48  Aligned_cols=79  Identities=13%  Similarity=0.238  Sum_probs=64.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.++...   ......+..|..++..++|++++++.+.+......++++|++++|+|.+++.
T Consensus        14 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~   93 (360)
T cd05627          14 FGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLM   93 (360)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHH
Confidence            688999984 468899999986321   1223456778888999999999999999999999999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        94 ~~~   96 (360)
T cd05627          94 KKD   96 (360)
T ss_pred             hcC
Confidence            543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.27  E-value=1.2e-10  Score=63.88  Aligned_cols=79  Identities=19%  Similarity=0.144  Sum_probs=64.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+...   .......+..|..+++.+.|+|++++.+.+..+...++++|++++|+|.+++.
T Consensus        56 fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~  135 (370)
T cd05621          56 FGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS  135 (370)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHH
Confidence            688999984 46889999998532   11223456778888999999999999999999999999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       136 ~~~  138 (370)
T cd05621         136 NYD  138 (370)
T ss_pred             hcC
Confidence            543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.27  E-value=1.5e-10  Score=60.11  Aligned_cols=78  Identities=22%  Similarity=0.206  Sum_probs=65.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.+|++.. .++..+++|.+...  .......+..++..++.++|+|++++.+.+......++++|++++++|.+++.+
T Consensus        13 ~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   92 (256)
T cd08529          13 FGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKM   92 (256)
T ss_pred             CeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHH
Confidence            578899985 46889999998632  234455788899999999999999999999888999999999999999999876


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        93 ~   93 (256)
T cd08529          93 Q   93 (256)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.27  E-value=1.8e-11  Score=70.36  Aligned_cols=76  Identities=22%  Similarity=0.320  Sum_probs=63.1

Q ss_pred             ceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            3 SLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         3 ~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      .|..++ ..+|+.+|+|++..+.   ......+.+|+.+|+-+.|||++.+++++.....++++.||+++|+|++++..+
T Consensus        27 ~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~k  106 (786)
T KOG0588|consen   27 CVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRK  106 (786)
T ss_pred             eehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhh
Confidence            345555 4579999999997552   223346889999999999999999999999999999999999999999988754

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.27  E-value=1.4e-11  Score=69.24  Aligned_cols=80  Identities=25%  Similarity=0.326  Sum_probs=69.8

Q ss_pred             CceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCCC
Q 038959            2 SSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRSF   80 (86)
Q Consensus         2 g~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~~   80 (86)
                      |.||.+. ..++..||+|.++.......+.+++|+.+|+..+|+|++.+++.+...+.+.++|||+++|+|.+.+.....
T Consensus       287 G~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~~  366 (550)
T KOG0578|consen  287 GGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTRM  366 (550)
T ss_pred             cceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcccc
Confidence            6788887 557888999999877777778899999999999999999999999888999999999999999998875543


Q ss_pred             C
Q 038959           81 S   81 (86)
Q Consensus        81 ~   81 (86)
                      .
T Consensus       367 ~  367 (550)
T KOG0578|consen  367 T  367 (550)
T ss_pred             c
Confidence            3

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.27  E-value=1.7e-10  Score=61.15  Aligned_cols=77  Identities=19%  Similarity=0.362  Sum_probs=65.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++.. ..+..+++|.+..........+..++..++.+.|+|++++.+.+...+..++++|+++++++..++.+
T Consensus        25 ~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  102 (292)
T cd06644          25 FGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLE  102 (292)
T ss_pred             CeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHh
Confidence            688999984 46888999998765545556788899999999999999999999888999999999999999887754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.26  E-value=1.3e-10  Score=61.93  Aligned_cols=78  Identities=23%  Similarity=0.262  Sum_probs=65.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+++|.++.........+.+|+..+..+.|+|++++.+.+..++..++++|++++++|..++...
T Consensus        34 ~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~  112 (297)
T cd06659          34 TGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQT  112 (297)
T ss_pred             ceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhhc
Confidence            678998884 468899999987544444567788899999999999999999998899999999999999999887654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.26  E-value=2.2e-10  Score=60.50  Aligned_cols=78  Identities=19%  Similarity=0.195  Sum_probs=62.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+++|.+.....   ........|..++..++|+|++++.+.+......++++|++++++|..++.
T Consensus         6 ~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~   85 (277)
T cd05607           6 FGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIY   85 (277)
T ss_pred             ceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHH
Confidence            788999984 4688999999863221   112244568889999999999999999988999999999999999988876


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        86 ~~   87 (277)
T cd05607          86 NV   87 (277)
T ss_pred             hc
Confidence            43

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.26  E-value=9.6e-11  Score=70.45  Aligned_cols=73  Identities=27%  Similarity=0.355  Sum_probs=60.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||+|.. .++..+|+|.++......    ..++..++.++|||++++++.+......++++||+++|+|.++++.
T Consensus       703 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~----~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~  776 (968)
T PLN00113        703 KGASYKGKSIKNGMQFVVKEINDVNSIP----SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN  776 (968)
T ss_pred             CeeEEEEEECCCCcEEEEEEccCCcccc----HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc
Confidence            689999985 578899999986432211    2346778889999999999999988899999999999999998853

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.26  E-value=2e-11  Score=69.77  Aligned_cols=72  Identities=21%  Similarity=0.343  Sum_probs=59.2

Q ss_pred             CceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCCCC
Q 038959            2 SSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRSFS   81 (86)
Q Consensus         2 g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~~~   81 (86)
                      |.||.|++ .+..||||..+...       ..++..++.++|+||+.+.++|...+..+++||||+.|.|...++.++..
T Consensus       138 GAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~i  209 (904)
T KOG4721|consen  138 GAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPI  209 (904)
T ss_pred             cceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCcc
Confidence            56888876 45678888665322       35577788899999999999999999999999999999999999977654

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.26  E-value=2.3e-10  Score=60.30  Aligned_cols=79  Identities=16%  Similarity=0.245  Sum_probs=65.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. ..+..+++|.+.... ......+..|+..++.+.|++++++.+.+......++++|++++|+|.+++...
T Consensus        17 ~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~   96 (277)
T cd06640          17 FGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG   96 (277)
T ss_pred             CeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcC
Confidence            678999984 467889999886432 233456788999999999999999999999999999999999999999988754


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus        97 ~   97 (277)
T cd06640          97 P   97 (277)
T ss_pred             C
Confidence            3

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.26  E-value=1.2e-10  Score=62.48  Aligned_cols=78  Identities=22%  Similarity=0.179  Sum_probs=62.9

Q ss_pred             CCceEEEEc----CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL----PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~----~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+..    .++..+|+|.+....  ......+..|+.++..+.|+|++++++.+..++..++++|++++|+|.++
T Consensus         9 ~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   88 (318)
T cd05582           9 FGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTR   88 (318)
T ss_pred             CEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHH
Confidence            688888763    357899999986422  12234567788899999999999999999999999999999999999998


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus        89 l~~~   92 (318)
T cd05582          89 LSKE   92 (318)
T ss_pred             HHHc
Confidence            8654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.26  E-value=1.1e-10  Score=63.47  Aligned_cols=74  Identities=23%  Similarity=0.301  Sum_probs=61.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.. .++..+++|.+.... ......+.+|+.+++.++|+|++++.+.+...+..++++||+.+|+|...
T Consensus        87 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  162 (353)
T PLN00034         87 GGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT  162 (353)
T ss_pred             CeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCccccc
Confidence            688999984 468899999986432 22345688999999999999999999999989999999999999988653

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.26  E-value=2e-10  Score=60.04  Aligned_cols=78  Identities=26%  Similarity=0.375  Sum_probs=64.4

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCc------ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTS------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++...++..+++|.+.....      .....+.+|+..++.+.|+|++++.+.+......++++|++++++|.++
T Consensus        13 ~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   92 (265)
T cd06631          13 YGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSI   92 (265)
T ss_pred             CeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHH
Confidence            6889999876788899998864321      1123577888999999999999999999888999999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +.+.
T Consensus        93 l~~~   96 (265)
T cd06631          93 LNRF   96 (265)
T ss_pred             HHhc
Confidence            8764

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.26  E-value=2.3e-10  Score=59.99  Aligned_cols=79  Identities=20%  Similarity=0.315  Sum_probs=62.5

Q ss_pred             CCceEEEEcC---CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP---DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~---~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.|...   ....+++|.+..... .....+.+|+..++.++|+|++++.+.+......++++|++++|+|.+++.
T Consensus         8 fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~   87 (269)
T cd05042           8 FGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLR   87 (269)
T ss_pred             CceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHH
Confidence            7899998732   234678887754322 223467888989999999999999999988899999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      +.+
T Consensus        88 ~~~   90 (269)
T cd05042          88 SNR   90 (269)
T ss_pred             hcc
Confidence            654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.26  E-value=1.9e-10  Score=60.31  Aligned_cols=78  Identities=28%  Similarity=0.448  Sum_probs=63.8

Q ss_pred             CCceEEEEcC-CC---CEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DG---QVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~---~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++... .+   ..+++|.+... .......+..|+..++.+.|+|++++.+.+......++++|++++|+|.+++
T Consensus        17 ~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   96 (269)
T cd05065          17 FGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFL   96 (269)
T ss_pred             CCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHH
Confidence            6889998843 23   36899998743 2334457889999999999999999999998889999999999999999988


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        97 ~~~   99 (269)
T cd05065          97 RQN   99 (269)
T ss_pred             hhC
Confidence            754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.25  E-value=2.6e-10  Score=59.65  Aligned_cols=78  Identities=26%  Similarity=0.362  Sum_probs=64.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||++.. +.+..+++|.+... ......+.+|+..+..+.|++++++.+.+...+..++++|++++++|.+++....
T Consensus        19 ~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~   97 (263)
T cd05052          19 YGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN   97 (263)
T ss_pred             cceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCC
Confidence            578899884 45788999998643 2334568889999999999999999999988899999999999999999887543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.25  E-value=3.2e-10  Score=59.44  Aligned_cols=78  Identities=27%  Similarity=0.386  Sum_probs=63.0

Q ss_pred             CCceEEEEcC-C---CCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-D---GQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~---~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+... .   ...+++|.++... ......+..|+..+..++|+|++++.+.+...+..++++|++++++|.+++
T Consensus        17 ~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   96 (267)
T cd05066          17 FGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFL   96 (267)
T ss_pred             CCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHH
Confidence            6889998742 2   3368899886432 233457888999999999999999999998889999999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      .+.
T Consensus        97 ~~~   99 (267)
T cd05066          97 RKH   99 (267)
T ss_pred             Hhc
Confidence            754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.25  E-value=3.7e-10  Score=59.54  Aligned_cols=78  Identities=14%  Similarity=0.201  Sum_probs=64.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|...... ......+.+++..+..+.|+|++++++.+......++++|++++++|..++...
T Consensus        17 ~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~   96 (277)
T cd06641          17 FGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG   96 (277)
T ss_pred             CeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC
Confidence            688999984 467899999886432 223346778899999999999999999999999999999999999999988654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=1.3e-10  Score=62.74  Aligned_cols=77  Identities=19%  Similarity=0.151  Sum_probs=63.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+...   .......+..|..++..++|++++.+++.+...+..++++|++++|+|..++.
T Consensus        14 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~   93 (331)
T cd05597          14 FGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLS   93 (331)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHH
Confidence            688999984 46889999998632   11223356778888888999999999999999999999999999999999986


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus        94 ~   94 (331)
T cd05597          94 K   94 (331)
T ss_pred             H
Confidence            5

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.25  E-value=2.9e-10  Score=59.55  Aligned_cols=78  Identities=27%  Similarity=0.433  Sum_probs=63.7

Q ss_pred             CCceEEEEcC----CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP----DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+|...    ....+++|.++... ......+..|+..+..++|+|++++.+.+...+..++++|++++++|.+++
T Consensus        17 ~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~   96 (266)
T cd05033          17 FGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFL   96 (266)
T ss_pred             cceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHH
Confidence            6889999853    24578999887433 223456888999999999999999999998888999999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        97 ~~~   99 (266)
T cd05033          97 REN   99 (266)
T ss_pred             Hhc
Confidence            754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.25  E-value=1.3e-10  Score=61.24  Aligned_cols=78  Identities=18%  Similarity=0.236  Sum_probs=64.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.|.. ..+..+++|.++... ......+..|+..++.+.|+|++++.+.+......++++|++++++|.+++...
T Consensus        17 ~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   96 (277)
T cd06642          17 FGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPG   96 (277)
T ss_pred             CeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhcC
Confidence            678999984 457789999886432 233446888999999999999999999999899999999999999999888654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=3e-12  Score=71.01  Aligned_cols=77  Identities=23%  Similarity=0.261  Sum_probs=64.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCC-CCcccceeeeeeeCC-ceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGP-ERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~-~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.++ ...+..||+|.++..-. +....-++|+..++.+. |+||+++.+.+..++ .+++++|||.. +|+++|+
T Consensus        23 fGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK  101 (538)
T KOG0661|consen   23 FGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMK  101 (538)
T ss_pred             ceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHh
Confidence            89999999 56788999999975322 22335688999999997 999999999998777 89999999965 8999998


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ++
T Consensus       102 ~R  103 (538)
T KOG0661|consen  102 DR  103 (538)
T ss_pred             hc
Confidence            76

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.24  E-value=2.9e-10  Score=60.48  Aligned_cols=78  Identities=24%  Similarity=0.321  Sum_probs=65.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.+..........+.+|+..++.+.|+|++++.+.+...+..++++|++++++|.+++...
T Consensus        33 ~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  111 (292)
T cd06657          33 TGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT  111 (292)
T ss_pred             CeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC
Confidence            578999885 468899999886544444556888999999999999999999999999999999999999999887554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.24  E-value=1.1e-11  Score=72.27  Aligned_cols=78  Identities=19%  Similarity=0.290  Sum_probs=69.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||+||.|+ ..+...+|+|++........+.+..|+...+.+.|.||+++.|.+..++++-++||-+|||+|.+++++.
T Consensus       588 YG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrsk  666 (1226)
T KOG4279|consen  588 YGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSK  666 (1226)
T ss_pred             eeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhc
Confidence            68899998 5567789999998776666777888999999999999999999999999999999999999999999864

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.24  E-value=3.6e-10  Score=58.86  Aligned_cols=77  Identities=31%  Similarity=0.470  Sum_probs=64.9

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.+.. .+..+++|.+..... ....+..|+..++.+.|+|++++.+.+......++++|++++++|.+++....
T Consensus        19 ~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~   95 (256)
T cd05039          19 FGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRG   95 (256)
T ss_pred             CceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcC
Confidence            578998875 378899999975433 45578889999999999999999999988889999999999999999987543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.24  E-value=1.9e-10  Score=60.54  Aligned_cols=78  Identities=29%  Similarity=0.498  Sum_probs=64.5

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+...      .+..+++|.+...... ....+.+|+.++..+.|+|++++.+.+......++++|++++++|.+
T Consensus        18 ~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   97 (280)
T cd05049          18 FGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNK   97 (280)
T ss_pred             CceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHH
Confidence            6789988742      2467999998754333 34578899999999999999999999998899999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus        98 ~i~~~  102 (280)
T cd05049          98 FLRSH  102 (280)
T ss_pred             HHHhc
Confidence            99754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.24  E-value=3.5e-10  Score=59.76  Aligned_cols=77  Identities=27%  Similarity=0.449  Sum_probs=62.9

Q ss_pred             CCceEEEEc-----CCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-----PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-----~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|..     ..+..+++|.+..... .....+.+|+..++.++|+|++++.+.+......++++|++++++|.++
T Consensus        18 ~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   97 (283)
T cd05090          18 FGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEF   97 (283)
T ss_pred             CcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHH
Confidence            688999873     2456889999874332 2335678899999999999999999999888999999999999999998


Q ss_pred             hcc
Q 038959           75 IFG   77 (86)
Q Consensus        75 l~~   77 (86)
                      +..
T Consensus        98 l~~  100 (283)
T cd05090          98 LIM  100 (283)
T ss_pred             HHh
Confidence            853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.24  E-value=5e-10  Score=58.30  Aligned_cols=78  Identities=22%  Similarity=0.136  Sum_probs=64.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+++|.++.. .....+.+..|...+..++|+|++++.+.+...+.+++++|++++|++.+++...
T Consensus        13 ~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   92 (255)
T cd08219          13 FGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQ   92 (255)
T ss_pred             CeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhc
Confidence            577888884 46888999998633 2334456778888999999999999999999999999999999999999888654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.24  E-value=1.8e-10  Score=62.02  Aligned_cols=79  Identities=22%  Similarity=0.275  Sum_probs=63.5

Q ss_pred             CCceEEEEc----CCCCEEEEEEecCCC----cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL----PDGQVIAVKRLSGRT----SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~----~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+..    ..+..+|+|.++...    ......+..|+.++..+.|+|++++.+.+...+..++++|++++|+|.
T Consensus         9 ~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~   88 (323)
T cd05584           9 YGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF   88 (323)
T ss_pred             CeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHH
Confidence            688998873    257789999986321    122345678889999999999999999999889999999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      .++.+..
T Consensus        89 ~~~~~~~   95 (323)
T cd05584          89 MHLEREG   95 (323)
T ss_pred             HHHHHcC
Confidence            9886543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.24  E-value=3.2e-10  Score=58.87  Aligned_cols=78  Identities=27%  Similarity=0.371  Sum_probs=65.8

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+....+..+++|.+...... ....+..|+..++.+.|++++++.+.+......++++|++++++|.+++.+.
T Consensus         8 ~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~   86 (251)
T cd05041           8 FGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKK   86 (251)
T ss_pred             CceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhc
Confidence            67899998655889999988754333 4457888999999999999999999999889999999999999999988653

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.24  E-value=3.5e-11  Score=69.09  Aligned_cols=84  Identities=19%  Similarity=0.258  Sum_probs=66.1

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc---ccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||+|+.+.++ ++..+|+|+++...+   .+.+....|-.++... .||.++++++.+...++++++|||+.||++..++
T Consensus       381 FGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~  460 (694)
T KOG0694|consen  381 FGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHI  460 (694)
T ss_pred             CceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEE
Confidence            8999999854 688999999986533   3344566666666554 6999999999999999999999999999977666


Q ss_pred             ccCCCCCCc
Q 038959           76 FGRSFSTFE   84 (86)
Q Consensus        76 ~~~~~~~~~   84 (86)
                      +...+.+..
T Consensus       461 ~~~~F~e~r  469 (694)
T KOG0694|consen  461 HTDVFSEPR  469 (694)
T ss_pred             ecccccHHH
Confidence            666666543

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.24  E-value=3.3e-10  Score=59.80  Aligned_cols=77  Identities=17%  Similarity=0.299  Sum_probs=64.4

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++... ++..+++|.+..........+..|+..++.++|+|++++.+.+...+..++++|++++++|..++.+
T Consensus        18 ~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~   95 (282)
T cd06643          18 FGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE   95 (282)
T ss_pred             CeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHh
Confidence            6789999854 5778889988655444455778899999999999999999999888999999999999999887764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.24  E-value=5.3e-10  Score=58.40  Aligned_cols=77  Identities=23%  Similarity=0.265  Sum_probs=63.5

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.+....+..+++|.+.... .....+..|+..++.++|+|++++.+.+ .....++++|++++++|.+++.+..
T Consensus        19 ~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~   95 (260)
T cd05067          19 FGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPE   95 (260)
T ss_pred             cceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHHHHHhcC
Confidence            688999987778889999987543 3345788899999999999999998876 4566899999999999999887543

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.23  E-value=1.8e-10  Score=61.97  Aligned_cols=79  Identities=18%  Similarity=0.178  Sum_probs=61.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhc-CCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+|+|.++...   .........|...+.. .+|++++++.+.+...+..++++||+++|+|..++
T Consensus         8 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l   87 (316)
T cd05619           8 FGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHI   87 (316)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHH
Confidence            789999985 468899999986421   1223345556666665 58999999999999999999999999999999998


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      .+..
T Consensus        88 ~~~~   91 (316)
T cd05619          88 QSCH   91 (316)
T ss_pred             HHcC
Confidence            7643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.23  E-value=3.6e-10  Score=59.71  Aligned_cols=78  Identities=28%  Similarity=0.421  Sum_probs=62.5

Q ss_pred             CCceEEEEc-----CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-----PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.+     ..+..+++|.+..........+.+|+.++..++|+|++++.+.+..  ....++++||+++|+|.+
T Consensus        17 ~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~   96 (284)
T cd05081          17 FGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRD   96 (284)
T ss_pred             CceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHH
Confidence            688998863     2477899999875554445678899999999999999999987643  346889999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++.+.
T Consensus        97 ~l~~~  101 (284)
T cd05081          97 YLQKH  101 (284)
T ss_pred             HHHhc
Confidence            98654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.23  E-value=1.3e-10  Score=61.77  Aligned_cols=78  Identities=23%  Similarity=0.270  Sum_probs=65.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.+..........+..|+..++.++|+|++++.+.+..++..++++|++++++|.+++...
T Consensus        35 ~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  113 (292)
T cd06658          35 TGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT  113 (292)
T ss_pred             CeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhcC
Confidence            678898884 468899999986544444556888999999999999999999998899999999999999999887654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.23  E-value=4.1e-10  Score=58.92  Aligned_cols=78  Identities=23%  Similarity=0.358  Sum_probs=63.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCccc---------HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQG---------IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~---------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      ||.||.+.. ..+..+++|.+.......         .+.+..|+..++.++|+|++++.+.+......++++|++++++
T Consensus        13 ~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   92 (267)
T cd06628          13 FGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGS   92 (267)
T ss_pred             CeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCC
Confidence            578899984 467889999886432221         1357788899999999999999999988999999999999999


Q ss_pred             hhhhhccC
Q 038959           71 LDFFIFGR   78 (86)
Q Consensus        71 l~~~l~~~   78 (86)
                      |..++.+.
T Consensus        93 L~~~l~~~  100 (267)
T cd06628          93 VAALLNNY  100 (267)
T ss_pred             HHHHHHhc
Confidence            99998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.23  E-value=9e-11  Score=63.40  Aligned_cols=78  Identities=19%  Similarity=0.301  Sum_probs=60.8

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeee-CCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLH-GPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l   71 (86)
                      ||.||++..      ..+..+|+|.+.... ......+..|+.++..+ +|+|++++++.+.. ....++++||+++|+|
T Consensus        20 fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L   99 (338)
T cd05102          20 FGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNL   99 (338)
T ss_pred             cceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcH
Confidence            789999862      134579999987432 22334688899999988 89999999998765 4468899999999999


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      .+++...
T Consensus       100 ~~~l~~~  106 (338)
T cd05102         100 SNFLRAK  106 (338)
T ss_pred             HHHHHhc
Confidence            9998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.23  E-value=1.8e-10  Score=60.23  Aligned_cols=78  Identities=22%  Similarity=0.374  Sum_probs=64.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc------ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+. ..++..+++|.+.....      .....+..|+..++.++|+|++++.+.+..++..+++++++++++|.+
T Consensus        13 ~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~   92 (268)
T cd06630          13 FSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSH   92 (268)
T ss_pred             ceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHH
Confidence            57899888 45788999999864321      123467889999999999999999999999999999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++.+.
T Consensus        93 ~l~~~   97 (268)
T cd06630          93 LLSKY   97 (268)
T ss_pred             HHHHh
Confidence            88754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.23  E-value=4.9e-10  Score=58.47  Aligned_cols=79  Identities=20%  Similarity=0.318  Sum_probs=66.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc--cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ--GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.+|.+.. .++..+++|.++.....  ....+..|+..++.++|++++++.+.....+..++++|++++++|.+++.+
T Consensus        13 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   92 (264)
T cd06626          13 FGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEH   92 (264)
T ss_pred             CcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhh
Confidence            578899984 46889999998754332  455788899999999999999999998888999999999999999999876


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus        93 ~~   94 (264)
T cd06626          93 GR   94 (264)
T ss_pred             cC
Confidence            53

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.23  E-value=2.6e-10  Score=59.79  Aligned_cols=78  Identities=24%  Similarity=0.353  Sum_probs=61.8

Q ss_pred             CCceEEEEcCC-------------CCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccC
Q 038959            1 GSSLLQGKLPD-------------GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP   67 (86)
Q Consensus         1 fg~v~~~~~~~-------------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~   67 (86)
                      ||.||+|.+..             ...+++|.++.........+..++..+..+.|+|++++++.+......++++|+++
T Consensus         8 ~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   87 (262)
T cd05077           8 RTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVE   87 (262)
T ss_pred             cceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEeccc
Confidence            68899997421             22578888765444444567778888999999999999999988888999999999


Q ss_pred             CCChhhhhccC
Q 038959           68 NKSLDFFIFGR   78 (86)
Q Consensus        68 ~g~l~~~l~~~   78 (86)
                      +|+|..++...
T Consensus        88 ~~~l~~~~~~~   98 (262)
T cd05077          88 FGPLDLFMHRK   98 (262)
T ss_pred             CCCHHHHHHhc
Confidence            99998887643

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.22  E-value=3.8e-11  Score=62.69  Aligned_cols=79  Identities=22%  Similarity=0.293  Sum_probs=61.9

Q ss_pred             CCceEEEEcC-CC-------CEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP-DG-------QVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~-~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++... .+       ..+++|.+........+.+..+...++.+.|+|++++++.+..+...++++||+++|+|.
T Consensus         8 ~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~   87 (258)
T cd05078           8 FTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLD   87 (258)
T ss_pred             chhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHH
Confidence            6889998742 22       236777765443344456778888999999999999999998888899999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      .++.+..
T Consensus        88 ~~l~~~~   94 (258)
T cd05078          88 TYLKKNK   94 (258)
T ss_pred             HHHhcCC
Confidence            9987643

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.22  E-value=1.2e-10  Score=63.91  Aligned_cols=78  Identities=23%  Similarity=0.317  Sum_probs=62.9

Q ss_pred             CCceEEEEc-C-----CCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-P-----DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~-----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. .     .+..+|+|.+.... ......+.+|+.+++.+ .|+|++++++.+......++++||+++|+|.
T Consensus        51 fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~  130 (374)
T cd05106          51 FGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLL  130 (374)
T ss_pred             cccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHH
Confidence            788998762 1     23579999997432 22344678899999988 8999999999999999999999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++...
T Consensus       131 ~~l~~~  136 (374)
T cd05106         131 NFLRKK  136 (374)
T ss_pred             HHHHhh
Confidence            998753

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.22  E-value=5.5e-10  Score=58.23  Aligned_cols=78  Identities=18%  Similarity=0.245  Sum_probs=65.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+++|.+..........+..|+..++.++|+|++++.+.+.....+++++|++++++|.+++...
T Consensus        16 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~   94 (262)
T cd06613          16 YGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVT   94 (262)
T ss_pred             ceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhh
Confidence            577888884 467789999987544445567888999999999999999999998899999999999999999988754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.22  E-value=3e-10  Score=62.33  Aligned_cols=79  Identities=19%  Similarity=0.131  Sum_probs=63.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+....   ......+..|..++..++|+|++++.+.+......++++|++++|+|..++.
T Consensus        56 fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~  135 (371)
T cd05622          56 FGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS  135 (371)
T ss_pred             CeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHH
Confidence            688999984 468899999985321   1223356678888889999999999999998999999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       136 ~~~  138 (371)
T cd05622         136 NYD  138 (371)
T ss_pred             hcC
Confidence            543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.21  E-value=2.5e-10  Score=61.58  Aligned_cols=78  Identities=15%  Similarity=0.140  Sum_probs=63.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.++....   .....+..|..++..++|++++.+.+.+...+..++++|++++|+|.+++.
T Consensus        14 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   93 (330)
T cd05601          14 FGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLN   93 (330)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHH
Confidence            688999984 4688999999874321   223356778888888999999999999988899999999999999999987


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      +.
T Consensus        94 ~~   95 (330)
T cd05601          94 RY   95 (330)
T ss_pred             Hh
Confidence            64

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=5.2e-10  Score=58.83  Aligned_cols=78  Identities=15%  Similarity=0.189  Sum_probs=65.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.+.... ......+..|+..++.++|+|++++.+.+......++++|++++++|.+++...
T Consensus        14 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~   93 (274)
T cd06609          14 FGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG   93 (274)
T ss_pred             CeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc
Confidence            578999984 468899999986432 233456788899999999999999999998889999999999999999998765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.21  E-value=7.3e-10  Score=57.69  Aligned_cols=78  Identities=14%  Similarity=0.110  Sum_probs=64.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.++..+ ..++..+++|.+...  .......+.+|+.+++.++|+|++++.+.+.....+++++|++++++|.+++.+
T Consensus        13 ~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~   92 (256)
T cd08221          13 FGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVR   92 (256)
T ss_pred             CceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHh
Confidence            56677777 446888999987643  233345678899999999999999999999999999999999999999999876


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        93 ~   93 (256)
T cd08221          93 Q   93 (256)
T ss_pred             c
Confidence            5

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.21  E-value=4.5e-10  Score=58.66  Aligned_cols=79  Identities=15%  Similarity=0.101  Sum_probs=65.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. ..+..+++|.+.....   .....+..|+..++.++|+|++++.+.+..+...++++|++++++|.+++.
T Consensus         6 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   85 (262)
T cd05572           6 FGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILR   85 (262)
T ss_pred             ceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHh
Confidence            578999984 3588999999864322   233468888999999999999999999988999999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      +..
T Consensus        86 ~~~   88 (262)
T cd05572          86 DRG   88 (262)
T ss_pred             hcC
Confidence            653

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.21  E-value=4.7e-10  Score=59.43  Aligned_cols=78  Identities=22%  Similarity=0.252  Sum_probs=63.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+......   ....+..|+.+++.++|++++.+.+.+...+..++++|++++++|..++.
T Consensus        13 ~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   92 (285)
T cd05632          13 FGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIY   92 (285)
T ss_pred             CeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHH
Confidence            688999984 46889999998643222   23356788999999999999999999988899999999999999998876


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        93 ~~   94 (285)
T cd05632          93 NM   94 (285)
T ss_pred             Hh
Confidence            53

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.21  E-value=4.6e-10  Score=58.36  Aligned_cols=79  Identities=25%  Similarity=0.356  Sum_probs=65.1

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC-----cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT-----SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++... ++..+++|.+....     ......+..|+..+..++|+|++++.+.+......++++|++++++|.++
T Consensus        13 ~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   92 (258)
T cd06632          13 FGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKL   92 (258)
T ss_pred             CceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHH
Confidence            6789999854 68899999886432     12334678899999999999999999999888899999999999999999


Q ss_pred             hccCC
Q 038959           75 IFGRS   79 (86)
Q Consensus        75 l~~~~   79 (86)
                      +.+..
T Consensus        93 ~~~~~   97 (258)
T cd06632          93 LKKYG   97 (258)
T ss_pred             HHhcC
Confidence            87653

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.21  E-value=5.6e-10  Score=60.34  Aligned_cols=78  Identities=19%  Similarity=0.269  Sum_probs=61.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+|+|.+....   ......+..|...+..+ +|+|++++++.+...+..++++|++++|+|..++
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~   87 (329)
T cd05618           8 YAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM   87 (329)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHH
Confidence            788999984 468899999987432   12223466777777665 8999999999999999999999999999998887


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        88 ~~~   90 (329)
T cd05618          88 QRQ   90 (329)
T ss_pred             HHc
Confidence            654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.21  E-value=5.9e-10  Score=59.13  Aligned_cols=79  Identities=20%  Similarity=0.240  Sum_probs=64.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. ..+..+++|.+....   ......+.+|+..++.++|+|++++.+.+......++++|++++++|.+++.
T Consensus        14 ~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~   93 (290)
T cd05580          14 FGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLR   93 (290)
T ss_pred             CeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHH
Confidence            578898884 468899999986322   2234567889999999999999999999998999999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        94 ~~~   96 (290)
T cd05580          94 KSG   96 (290)
T ss_pred             HcC
Confidence            653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.21  E-value=2.6e-10  Score=59.86  Aligned_cols=78  Identities=17%  Similarity=0.254  Sum_probs=62.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---c-------cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---Q-------GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g   69 (86)
                      ||.||.|.. .++..+++|.++....   .       ..+.+..|+..++.++|+|++++.+.+..++..++++|+++++
T Consensus        14 ~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   93 (272)
T cd06629          14 YGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGG   93 (272)
T ss_pred             ceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCC
Confidence            678999984 4688999998753210   0       1235677888999999999999999999999999999999999


Q ss_pred             ChhhhhccC
Q 038959           70 SLDFFIFGR   78 (86)
Q Consensus        70 ~l~~~l~~~   78 (86)
                      +|.+++...
T Consensus        94 ~L~~~l~~~  102 (272)
T cd06629          94 SIGSCLRTY  102 (272)
T ss_pred             cHHHHHhhc
Confidence            999988764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.20  E-value=4.7e-10  Score=59.93  Aligned_cols=79  Identities=10%  Similarity=0.095  Sum_probs=64.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. ..+..+++|.+.....   .....+..|+..+..++|+|++++++.+...+..++++|++++++|.+++.
T Consensus        14 ~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~   93 (305)
T cd05609          14 YGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLK   93 (305)
T ss_pred             CeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHH
Confidence            578898884 4678899998864321   223457788889999999999999999988889999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        94 ~~~   96 (305)
T cd05609          94 NIG   96 (305)
T ss_pred             HcC
Confidence            643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.20  E-value=7.8e-10  Score=57.57  Aligned_cols=77  Identities=23%  Similarity=0.341  Sum_probs=64.3

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++....+..+++|.+.... .....+..|+..++.+.|++++++++.+......++++|++++++|.+++...
T Consensus        17 ~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~   93 (256)
T cd05112          17 FGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQ   93 (256)
T ss_pred             cceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhC
Confidence            678999886557789999886432 33456888999999999999999999998888999999999999999988754

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.20  E-value=4e-10  Score=60.64  Aligned_cols=79  Identities=19%  Similarity=0.233  Sum_probs=61.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.+....   ......+..|..++..+ +|++++.+.+.+...+..++++|++++|+|...+
T Consensus         8 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l   87 (321)
T cd05591           8 FGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQI   87 (321)
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHH
Confidence            688999985 468899999986421   12233456677777654 8999999999999999999999999999999888


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus        88 ~~~~   91 (321)
T cd05591          88 QRSR   91 (321)
T ss_pred             HHcC
Confidence            6543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.20  E-value=4.5e-11  Score=63.71  Aligned_cols=76  Identities=18%  Similarity=0.225  Sum_probs=62.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.|++++. .+|+.||+|.+....  +....--++|+..+++++|+|++.+..+|.....+.+++||+....|.++-+
T Consensus        15 YGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~   93 (396)
T KOG0593|consen   15 YGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELER   93 (396)
T ss_pred             ceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHHHHHh
Confidence            689999994 579999999986432  2233456899999999999999999999999999999999998866666544

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.20  E-value=4.6e-10  Score=59.51  Aligned_cols=78  Identities=26%  Similarity=0.468  Sum_probs=63.5

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+..      .++..+++|.+..........+..|+..+..+.|++++++.+.+...+..++++|++++++|.++
T Consensus        18 ~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   97 (288)
T cd05093          18 FGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF   97 (288)
T ss_pred             CeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHH
Confidence            678888862      12446888988754444455788899999999999999999999888999999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus        98 i~~~  101 (288)
T cd05093          98 LRAH  101 (288)
T ss_pred             HHHc
Confidence            8754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.20  E-value=3.5e-10  Score=61.16  Aligned_cols=77  Identities=16%  Similarity=0.087  Sum_probs=62.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||+++. .++..+|+|.+....   ......+..+..++..+.|++++.+.+.+...+..++++||+++|+|..++.
T Consensus        14 fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~   93 (331)
T cd05624          14 FGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLS   93 (331)
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHH
Confidence            688999984 468889999986321   1222346677788888899999999999999999999999999999999987


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus        94 ~   94 (331)
T cd05624          94 K   94 (331)
T ss_pred             H
Confidence            5

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.20  E-value=4.4e-10  Score=67.32  Aligned_cols=77  Identities=16%  Similarity=0.135  Sum_probs=64.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.++...   ......+.+|+.++..+.|||++++.+.+...+..++++|++++|+|.+++.
T Consensus        15 fG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~   94 (932)
T PRK13184         15 MGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLK   94 (932)
T ss_pred             CEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHH
Confidence            688999984 468899999986432   1223468889999999999999999999999999999999999999999886


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      +
T Consensus        95 s   95 (932)
T PRK13184         95 S   95 (932)
T ss_pred             H
Confidence            4

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.20  E-value=7.9e-10  Score=57.88  Aligned_cols=77  Identities=16%  Similarity=0.198  Sum_probs=63.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+++|.++...   ......+..|+..++.+.|+|++++.+.+..++..++++|++++|+|..++.
T Consensus        15 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~   94 (267)
T cd08228          15 FSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIK   94 (267)
T ss_pred             CeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHH
Confidence            678999984 468899999876322   2233467889999999999999999999988889999999999999998875


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus        95 ~   95 (267)
T cd08228          95 Y   95 (267)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.20  E-value=5.4e-10  Score=59.03  Aligned_cols=78  Identities=26%  Similarity=0.445  Sum_probs=64.5

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+..      ..+..+++|.+..........+.+|+..+..++|+|++++.+.+......++++|++++|+|.++
T Consensus        18 ~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   97 (280)
T cd05092          18 FGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRF   97 (280)
T ss_pred             CCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHH
Confidence            678888752      13557888888755555556788999999999999999999999888889999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +.+.
T Consensus        98 i~~~  101 (280)
T cd05092          98 LRSH  101 (280)
T ss_pred             HHhc
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.19  E-value=5.7e-10  Score=59.17  Aligned_cols=78  Identities=21%  Similarity=0.237  Sum_probs=63.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+++|.+......   ....+..|+.+++.++|++++.+.+.+...+..++++|++++++|.+++.
T Consensus        13 ~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~   92 (285)
T cd05630          13 FGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY   92 (285)
T ss_pred             CeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHH
Confidence            688999884 46889999998643222   22346778899999999999999999988899999999999999998886


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        93 ~~   94 (285)
T cd05630          93 HM   94 (285)
T ss_pred             Hh
Confidence            43

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.19  E-value=1.1e-11  Score=72.97  Aligned_cols=79  Identities=24%  Similarity=0.324  Sum_probs=65.3

Q ss_pred             CCceEEEEc-CC----CCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PD----GQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~----~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||+||+|.+ ..    ..+||+|++... ..+...+++.|...|.+++|+|++++.++|.... +.++.+++|.|.|.++
T Consensus       709 fGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDy  787 (1177)
T KOG1025|consen  709 FGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDY  787 (1177)
T ss_pred             ceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHH
Confidence            899999984 43    347899998744 3445678999999999999999999999996555 8899999999999999


Q ss_pred             hccCCC
Q 038959           75 IFGRSF   80 (86)
Q Consensus        75 l~~~~~   80 (86)
                      ++.++.
T Consensus       788 vr~hr~  793 (1177)
T KOG1025|consen  788 VREHRD  793 (1177)
T ss_pred             HHHhhc
Confidence            987543

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.19  E-value=6.5e-10  Score=58.99  Aligned_cols=77  Identities=17%  Similarity=0.243  Sum_probs=62.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+|+|.++... ......+.+|+.+++.++|+|++++.+.+......++++|++++ +|.+++...
T Consensus        18 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~   96 (288)
T cd07871          18 YATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNC   96 (288)
T ss_pred             CEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhc
Confidence            688999984 468899999986432 22334677899999999999999999999888889999999974 888887643

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.19  E-value=7.9e-10  Score=59.65  Aligned_cols=78  Identities=17%  Similarity=0.171  Sum_probs=63.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||+||.+.. ..+..+|+|.+....  ....+.+..|+..+..++|+|++++++.+..++..++++|++.++++.+++.+
T Consensus        13 ~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~   92 (328)
T cd08226          13 LTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKT   92 (328)
T ss_pred             ceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHh
Confidence            467898884 478999999986432  22234677888888889999999999999999999999999999999998875


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        93 ~   93 (328)
T cd08226          93 Y   93 (328)
T ss_pred             h
Confidence            4

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=2.4e-10  Score=61.96  Aligned_cols=78  Identities=23%  Similarity=0.259  Sum_probs=64.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+....   ......+..|...+..+.|++++++++.+...+..++++|++++++|.+++.
T Consensus        14 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   93 (350)
T cd05573          14 FGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLI   93 (350)
T ss_pred             cEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHH
Confidence            688999984 468899999986321   1233467788889999999999999999998999999999999999999887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        94 ~~   95 (350)
T cd05573          94 RK   95 (350)
T ss_pred             Hc
Confidence            65

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=9.2e-10  Score=58.99  Aligned_cols=78  Identities=17%  Similarity=0.204  Sum_probs=64.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. ..+..+++|.+......   ....+..|+..+..+.|++++++++.+......++++|++.+++|.+++.
T Consensus        14 ~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   93 (316)
T cd05574          14 VGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQ   93 (316)
T ss_pred             cEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHH
Confidence            578999884 35889999999754322   33467888899999999999999999998999999999999999999887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      +.
T Consensus        94 ~~   95 (316)
T cd05574          94 RQ   95 (316)
T ss_pred             hC
Confidence            54

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.19  E-value=2.6e-10  Score=60.28  Aligned_cols=78  Identities=19%  Similarity=0.197  Sum_probs=64.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++... .+..+++|.+... .......+.+|+..+..+.|+|++++.+.+...+..++++|++++++|..++.+.
T Consensus        14 ~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   93 (286)
T cd06622          14 YGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGG   93 (286)
T ss_pred             CeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhc
Confidence            6889999854 6889999988643 2223356888999999999999999999998899999999999999999888764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.18  E-value=4.6e-10  Score=60.45  Aligned_cols=79  Identities=20%  Similarity=0.293  Sum_probs=62.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.+...   .......+..|...+..+ .|+|++++++.+...+.+++++||+++|+|..++
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i   87 (320)
T cd05590           8 FGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHI   87 (320)
T ss_pred             CeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHH
Confidence            688999984 46889999998632   112234556677777665 7999999999999999999999999999999888


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus        88 ~~~~   91 (320)
T cd05590          88 QKSR   91 (320)
T ss_pred             HHcC
Confidence            6543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.18  E-value=5.9e-10  Score=57.97  Aligned_cols=78  Identities=19%  Similarity=0.169  Sum_probs=64.4

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++... ++..+++|.+...  .......+.+|+..++.+.|+|++++.+.+...+..++++|++++++|.+++..
T Consensus        13 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   92 (257)
T cd08225          13 FGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINR   92 (257)
T ss_pred             cceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHh
Confidence            5789999854 5788999998643  123344677899999999999999999999889999999999999999998875


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        93 ~   93 (257)
T cd08225          93 Q   93 (257)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.18  E-value=7.4e-10  Score=58.79  Aligned_cols=79  Identities=27%  Similarity=0.429  Sum_probs=64.0

Q ss_pred             CCceEEEEc-C-----CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-P-----DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+.. .     +...+++|.+..........+.+|+..+..+.|+|++++.+.+......++++|++++++|.++
T Consensus        18 ~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   97 (291)
T cd05094          18 FGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF   97 (291)
T ss_pred             CCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHH
Confidence            578888862 1     2345788887655444456788999999999999999999999988999999999999999999


Q ss_pred             hccCC
Q 038959           75 IFGRS   79 (86)
Q Consensus        75 l~~~~   79 (86)
                      +....
T Consensus        98 i~~~~  102 (291)
T cd05094          98 LRAHG  102 (291)
T ss_pred             HHhcC
Confidence            97643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.18  E-value=5.4e-10  Score=59.23  Aligned_cols=77  Identities=25%  Similarity=0.368  Sum_probs=61.6

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||+|...      .+..+++|.+.... ......+..+...++.++|++++++.+.+..+...++++||+++|+|.+
T Consensus        19 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~   98 (288)
T cd05061          19 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS   98 (288)
T ss_pred             CcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHH
Confidence            6889988632      24478999876432 2233457788889999999999999999988889999999999999999


Q ss_pred             hhcc
Q 038959           74 FIFG   77 (86)
Q Consensus        74 ~l~~   77 (86)
                      ++.+
T Consensus        99 ~l~~  102 (288)
T cd05061          99 YLRS  102 (288)
T ss_pred             HHHH
Confidence            9975

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.18  E-value=9.5e-10  Score=58.00  Aligned_cols=79  Identities=22%  Similarity=0.247  Sum_probs=63.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. ..+..+++|.+.....   .....+..|+.+++.++|++++++.+.+...+..++++|++++++|.+++.
T Consensus         6 ~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   85 (277)
T cd05577           6 FGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIY   85 (277)
T ss_pred             ceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHH
Confidence            688999884 4688999999864321   223356778899999999999999999988889999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      +..
T Consensus        86 ~~~   88 (277)
T cd05577          86 NVG   88 (277)
T ss_pred             HcC
Confidence            543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.18  E-value=8.5e-10  Score=57.67  Aligned_cols=76  Identities=22%  Similarity=0.263  Sum_probs=62.3

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+....+..+++|.+.... .....+.+|+.+++.++|++++++.+.+.. ...++++|++++++|.+++.+.
T Consensus        19 ~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~   94 (260)
T cd05073          19 FGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSD   94 (260)
T ss_pred             ceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhC
Confidence            678999886666779999886432 234568889999999999999999988866 7789999999999999998764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.18  E-value=9.3e-10  Score=58.11  Aligned_cols=74  Identities=22%  Similarity=0.293  Sum_probs=61.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++. ..++..+++|.+... .......+..|+.++..+.|+|++++++.+...+..++++|+++++++..+
T Consensus        14 ~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~   89 (279)
T cd06619          14 GGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY   89 (279)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh
Confidence            67899998 457889999988643 222334688899999999999999999999999999999999999988654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.18  E-value=8e-10  Score=59.54  Aligned_cols=79  Identities=19%  Similarity=0.210  Sum_probs=60.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHH-HHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAK-VIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+|+|.+.....   .....+..+.. .++.+.|+|++++.+.+...+..++++|++++|+|..++
T Consensus         8 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l   87 (323)
T cd05575           8 FGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHL   87 (323)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHH
Confidence            688999984 4788999999863211   12234445544 456789999999999999999999999999999999888


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus        88 ~~~~   91 (323)
T cd05575          88 QRER   91 (323)
T ss_pred             HhcC
Confidence            6543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.18  E-value=1.1e-09  Score=56.99  Aligned_cols=78  Identities=18%  Similarity=0.171  Sum_probs=64.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.+|.+.. .++..+++|.+...  .......+..|+..++.++|+|++++.+.+...+..++++|++++++|.+++..
T Consensus        13 ~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   92 (256)
T cd08218          13 FGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINA   92 (256)
T ss_pred             ceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHh
Confidence            577888873 46888999998632  223345678899999999999999999999889999999999999999998865


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        93 ~   93 (256)
T cd08218          93 Q   93 (256)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.18  E-value=9.6e-10  Score=57.48  Aligned_cols=77  Identities=23%  Similarity=0.316  Sum_probs=60.8

Q ss_pred             CCceEEEEcC---CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP---DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~---~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.|.+.   .+..+++|.+..... ...+.+.+|+..++.++|+|++++.+.+. ....++++|++++|+|.+++.
T Consensus         8 ~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~   86 (257)
T cd05115           8 FGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLS   86 (257)
T ss_pred             cccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHH
Confidence            6889998743   345689998875432 23456889999999999999999998875 456889999999999999886


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        87 ~~   88 (257)
T cd05115          87 GK   88 (257)
T ss_pred             hC
Confidence            53

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.18  E-value=6.8e-10  Score=59.85  Aligned_cols=79  Identities=20%  Similarity=0.201  Sum_probs=60.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHH-HHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAK-VIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.+....   ......+..+.. .++.++|+|++++++.+...+..++++||+++|+|..++
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l   87 (325)
T cd05604           8 FGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHL   87 (325)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHH
Confidence            688999984 468899999986321   122234445544 456689999999999999999999999999999998887


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus        88 ~~~~   91 (325)
T cd05604          88 QRER   91 (325)
T ss_pred             HHcC
Confidence            6543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.17  E-value=1.5e-09  Score=56.87  Aligned_cols=76  Identities=26%  Similarity=0.299  Sum_probs=61.1

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.......+++|.+.... .....+..|+.++..++|+|++++.+.+. ....++++|++++|+|.+++.+.
T Consensus        19 ~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~   94 (262)
T cd05071          19 FGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGE   94 (262)
T ss_pred             CCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhc
Confidence            678999986555679999987432 23456888999999999999999988764 45678999999999999998764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.17  E-value=1.1e-09  Score=56.88  Aligned_cols=79  Identities=19%  Similarity=0.278  Sum_probs=64.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.+|.+.. .++..+++|.+....  ......+..|+..++.++|+|++++++.+...+..++++|++++++|.+++.+
T Consensus        13 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   92 (256)
T cd08220          13 FGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQK   92 (256)
T ss_pred             ceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHH
Confidence            577888874 468889999986432  22345688899999999999999999988888899999999999999999876


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus        93 ~~   94 (256)
T cd08220          93 RC   94 (256)
T ss_pred             hc
Confidence            43

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.17  E-value=7.9e-11  Score=66.84  Aligned_cols=69  Identities=23%  Similarity=0.235  Sum_probs=60.4

Q ss_pred             CCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959           11 DGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus        11 ~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      +|..||||+++....  .....+..|+.+|+-.+|||++.++.++..+..+++++|.=.+|+|+++|..+.
T Consensus        42 TGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe  112 (864)
T KOG4717|consen   42 TGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHE  112 (864)
T ss_pred             ccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhh
Confidence            688999999986532  334578999999999999999999999999999999999999999999998653

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.17  E-value=7.4e-10  Score=59.59  Aligned_cols=78  Identities=22%  Similarity=0.276  Sum_probs=61.8

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+... ++..+|+|.++...   ......+..|..++..+ .|+|++++.+.+...+..++++|++++|+|..++
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   87 (318)
T cd05570           8 FGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHI   87 (318)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHH
Confidence            6889999854 68899999986321   12233456677777766 7999999999999999999999999999999888


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      .+.
T Consensus        88 ~~~   90 (318)
T cd05570          88 QRS   90 (318)
T ss_pred             HHc
Confidence            755

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.17  E-value=4e-10  Score=59.20  Aligned_cols=78  Identities=21%  Similarity=0.284  Sum_probs=61.0

Q ss_pred             CCceEEEEcCCC---CEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLPDG---QVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~~~---~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++...++   ..+++|.+.... ......+.++...+..++|+|++++.+.+......++++|++++|+|.+++.
T Consensus         8 ~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   87 (268)
T cd05086           8 FGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLS   87 (268)
T ss_pred             CceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHH
Confidence            688999874322   345566665332 2334578888888999999999999999998889999999999999999987


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      +.
T Consensus        88 ~~   89 (268)
T cd05086          88 QE   89 (268)
T ss_pred             hh
Confidence            54

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.17  E-value=6.5e-10  Score=59.91  Aligned_cols=79  Identities=18%  Similarity=0.280  Sum_probs=60.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHH---hcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVI---AKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.. .++..+|+|.++...   ......+..|...+   +.+.|+|++++.+.+...+..++++|++++|+|..
T Consensus        12 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~   91 (324)
T cd05589          12 FGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMM   91 (324)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHH
Confidence            688999984 468899999986321   12223455555443   56789999999999999999999999999999988


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      .+....
T Consensus        92 ~~~~~~   97 (324)
T cd05589          92 HIHTDV   97 (324)
T ss_pred             HhhcCC
Confidence            876543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.17  E-value=5.1e-10  Score=58.26  Aligned_cols=77  Identities=22%  Similarity=0.410  Sum_probs=60.4

Q ss_pred             CCceEEEEcC-CC----------CEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCC
Q 038959            1 GSSLLQGKLP-DG----------QVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~~-~~----------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g   69 (86)
                      ||.||++... .+          ..+++|.+...... ...+..++..++.+.|+|++++.+.+.. ...++++|++++|
T Consensus         8 ~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~   85 (259)
T cd05037           8 FTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFG   85 (259)
T ss_pred             cceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCC
Confidence            6789998854 23          24677776543322 5678888899999999999999998877 7789999999999


Q ss_pred             ChhhhhccCC
Q 038959           70 SLDFFIFGRS   79 (86)
Q Consensus        70 ~l~~~l~~~~   79 (86)
                      +|.+++.+..
T Consensus        86 ~L~~~l~~~~   95 (259)
T cd05037          86 PLDVFLHREK   95 (259)
T ss_pred             cHHHHHHhhc
Confidence            9999988654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.17  E-value=1.5e-09  Score=57.52  Aligned_cols=78  Identities=26%  Similarity=0.285  Sum_probs=64.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.++.........+.+|+..+..+.|++++++.+.+..++..++++|++++++|.+++.+.
T Consensus        32 ~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~  110 (285)
T cd06648          32 TGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHT  110 (285)
T ss_pred             CeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhC
Confidence            577888884 468889999886444344456788889999999999999999998889999999999999999988764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.16  E-value=1.3e-09  Score=58.23  Aligned_cols=77  Identities=21%  Similarity=0.261  Sum_probs=61.5

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+... ++..+|+|.+..... .......+|+.+++.+.|+|++.+.+.+......++++|+++ +++.+++...
T Consensus        18 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~   96 (303)
T cd07869          18 YATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKH   96 (303)
T ss_pred             CEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhC
Confidence            6889999854 688999999864322 223456789999999999999999999998999999999995 5777777643

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.16  E-value=1.2e-09  Score=57.02  Aligned_cols=78  Identities=17%  Similarity=0.193  Sum_probs=65.6

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.+|++... ++..+++|.+..... .....+..++..+..+.|+|++++.+.+..++.+++++|++++++|.+++...
T Consensus        14 ~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   93 (264)
T cd06623          14 SGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV   93 (264)
T ss_pred             CeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc
Confidence            5678888854 588999999875433 34557888999999999999999999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.16  E-value=1.1e-09  Score=57.73  Aligned_cols=78  Identities=24%  Similarity=0.447  Sum_probs=62.8

Q ss_pred             CCceEEEEcC-CC-----CEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP-DG-----QVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~-~~-----~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+... .+     ..+++|.+..... .....+.+|+..+..++|++++++.+.+......++++|++++|+|.+
T Consensus        18 ~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~   97 (283)
T cd05048          18 FGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHE   97 (283)
T ss_pred             CCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHH
Confidence            6889988742 22     4788998864332 233467889999999999999999999988888999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++.+.
T Consensus        98 ~l~~~  102 (283)
T cd05048          98 FLVRN  102 (283)
T ss_pred             HHHhc
Confidence            98754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.16  E-value=1e-09  Score=57.00  Aligned_cols=79  Identities=28%  Similarity=0.396  Sum_probs=65.2

Q ss_pred             CCceEEEEcC-CC----CEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP-DG----QVIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~-~~----~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+... .+    ..+++|.+...... ....+..|+..+..+.|++++++.+.+...+..+++++++++++|.++
T Consensus        12 ~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~   91 (258)
T smart00219       12 FGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDY   91 (258)
T ss_pred             CcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHH
Confidence            6889999843 33    78999999754332 455788899999999999999999999888999999999999999999


Q ss_pred             hccCC
Q 038959           75 IFGRS   79 (86)
Q Consensus        75 l~~~~   79 (86)
                      +....
T Consensus        92 ~~~~~   96 (258)
T smart00219       92 LRKNR   96 (258)
T ss_pred             HHhhh
Confidence            87643

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.16  E-value=9.9e-10  Score=59.10  Aligned_cols=78  Identities=18%  Similarity=0.199  Sum_probs=60.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhc-CCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+|+|.++...   .........+...+.. ..|++++.+.+.+...+..++++|++++|+|..++
T Consensus         8 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~   87 (316)
T cd05592           8 FGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHI   87 (316)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHH
Confidence            789999984 468899999986321   1222344455555554 58999999999998899999999999999999888


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        88 ~~~   90 (316)
T cd05592          88 QSS   90 (316)
T ss_pred             HHc
Confidence            654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.16  E-value=1e-09  Score=57.40  Aligned_cols=77  Identities=18%  Similarity=0.250  Sum_probs=64.2

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++... ++..+++|.++...   ......+.+|+..++.+.|+++++..+.+...+..++++|++++|+|..++.
T Consensus        15 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   94 (267)
T cd08224          15 FSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIK   94 (267)
T ss_pred             ceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHH
Confidence            5789999854 78899999886322   2234578889999999999999999999988889999999999999998886


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      +
T Consensus        95 ~   95 (267)
T cd08224          95 H   95 (267)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.16  E-value=8.4e-10  Score=58.64  Aligned_cols=78  Identities=23%  Similarity=0.329  Sum_probs=63.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc-----cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ-----GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.. .++..+++|.+......     ....+..|+..+..+.|+|++++.+.+...+..++++|++ +|+|.++
T Consensus        13 ~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~   91 (298)
T cd07841          13 YAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKV   91 (298)
T ss_pred             ccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHH
Confidence            578999984 46889999999754322     2335677888999999999999999998889999999999 8899999


Q ss_pred             hccCC
Q 038959           75 IFGRS   79 (86)
Q Consensus        75 l~~~~   79 (86)
                      +.+..
T Consensus        92 i~~~~   96 (298)
T cd07841          92 IKDKS   96 (298)
T ss_pred             HhccC
Confidence            87654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.16  E-value=7.5e-10  Score=58.22  Aligned_cols=79  Identities=22%  Similarity=0.319  Sum_probs=63.6

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+...      ....+++|.+...... ....+..|+..+..+.|+|++++.+.+......++++|++++|+|.+
T Consensus        18 ~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~   97 (275)
T cd05046          18 FGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQ   97 (275)
T ss_pred             eeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHH
Confidence            6788988742      2457888988654333 34578889999999999999999999988888999999999999999


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++....
T Consensus        98 ~i~~~~  103 (275)
T cd05046          98 FLRATK  103 (275)
T ss_pred             HHHhcc
Confidence            987544

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.15  E-value=8.4e-10  Score=59.40  Aligned_cols=78  Identities=21%  Similarity=0.212  Sum_probs=60.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHH-HHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAK-VIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+|+|.+.....   .....+..+.. .++.+.|+|++++.+.+...+..++++|++++|+|...+
T Consensus         8 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l   87 (321)
T cd05603           8 FGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHL   87 (321)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHH
Confidence            688999985 4688999999863221   12234455544 567789999999999999999999999999999998877


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        88 ~~~   90 (321)
T cd05603          88 QRE   90 (321)
T ss_pred             HHc
Confidence            654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.15  E-value=8.7e-10  Score=57.43  Aligned_cols=78  Identities=26%  Similarity=0.299  Sum_probs=63.5

Q ss_pred             CCceEEEEcC--CC--CEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP--DG--QVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~--~~--~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.+.  .+  ..+++|.+..... .....+..|+..++.++|+|++++.+.+.. ...++++|++++++|.+++
T Consensus         8 ~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l   86 (257)
T cd05040           8 FGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRL   86 (257)
T ss_pred             cccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHH
Confidence            5789999843  22  2589999876544 445578899999999999999999998877 8899999999999999998


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      .+..
T Consensus        87 ~~~~   90 (257)
T cd05040          87 RKDA   90 (257)
T ss_pred             Hhcc
Confidence            7653

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.15  E-value=1.3e-09  Score=57.57  Aligned_cols=77  Identities=23%  Similarity=0.306  Sum_probs=64.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++.. .++..+++|.+....  ......+..|+..++.+.|+|++++.+.+..+...++++|++ +++|.+++..
T Consensus        13 ~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~   91 (286)
T cd07832          13 HGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRD   91 (286)
T ss_pred             CcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHh
Confidence            578999984 468899999987433  233457888999999999999999999998899999999999 9999998864


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        92 ~   92 (286)
T cd07832          92 E   92 (286)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.15  E-value=9.3e-10  Score=58.27  Aligned_cols=78  Identities=31%  Similarity=0.466  Sum_probs=63.2

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++...      ++..+++|.+..... .....+..|+..+..+.|+|++++.+.+......++++|++++|+|.+
T Consensus        18 ~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~   97 (288)
T cd05050          18 FGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE   97 (288)
T ss_pred             cccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHH
Confidence            6788988732      356889998864332 223468889999999999999999999988889999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus        98 ~l~~~  102 (288)
T cd05050          98 FLRHR  102 (288)
T ss_pred             HHHHc
Confidence            98753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=1.7e-09  Score=56.98  Aligned_cols=78  Identities=22%  Similarity=0.427  Sum_probs=63.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCC---CCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQ---HTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+++|.++... ......+.+|+..++.+.   |+|++++.+.+......++++|++++++|.+++
T Consensus        14 ~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~   93 (277)
T cd06917          14 YGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLM   93 (277)
T ss_pred             CceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHH
Confidence            688999984 578899999986432 233446777888877775   999999999998888999999999999999988


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        94 ~~~   96 (277)
T cd06917          94 KAG   96 (277)
T ss_pred             Hcc
Confidence            654

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.15  E-value=1.6e-10  Score=64.02  Aligned_cols=74  Identities=22%  Similarity=0.298  Sum_probs=58.9

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhc--CCCCcccceeeeeeeC----CceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAK--PQHTNIVRLIGCSLHG----PERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~----~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|+| .|+.||||++...   +...+.+|..+.+.  +.|.||+.+++.-...    ..+.|+.+|-+.|+|+++
T Consensus       224 yGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~Dy  299 (513)
T KOG2052|consen  224 FGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDY  299 (513)
T ss_pred             ccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHH
Confidence            789999998 5788999999643   34467777777765  6999999998764332    358899999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       300 L~r~  303 (513)
T KOG2052|consen  300 LNRN  303 (513)
T ss_pred             Hhhc
Confidence            9864

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.15  E-value=2.9e-10  Score=59.24  Aligned_cols=79  Identities=16%  Similarity=0.235  Sum_probs=64.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+... ++..+++|.+.....   .....+..|+..+..+.|+|++++.+.+......++++|++++++|.+++.
T Consensus         6 ~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   85 (265)
T cd05579           6 YGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLE   85 (265)
T ss_pred             ceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHH
Confidence            6889999854 588999999864332   234467788889999999999999998888889999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      +..
T Consensus        86 ~~~   88 (265)
T cd05579          86 NVG   88 (265)
T ss_pred             HcC
Confidence            643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.15  E-value=1.2e-09  Score=58.43  Aligned_cols=79  Identities=22%  Similarity=0.254  Sum_probs=62.6

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+..      ..+..+|+|.++... ....+.+..|+..++.+ +|+|++++.+.+...+..++++|++++|+|.
T Consensus        48 ~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  127 (302)
T cd05055          48 FGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLL  127 (302)
T ss_pred             CeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHH
Confidence            577887752      124578999886432 23345688899999999 7999999999998889999999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++.+..
T Consensus       128 ~~i~~~~  134 (302)
T cd05055         128 NFLRRKR  134 (302)
T ss_pred             HHHHhCC
Confidence            9987543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.14  E-value=1.8e-09  Score=56.64  Aligned_cols=78  Identities=27%  Similarity=0.434  Sum_probs=63.0

Q ss_pred             CCceEEEEcC-CCC---EEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQ---VIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~---~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++... .+.   .+++|.++.. .......+..|+..+..+.|+|++++.+.+...+..++++|++++++|..++
T Consensus        18 ~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   97 (268)
T cd05063          18 FGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYL   97 (268)
T ss_pred             CccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHH
Confidence            6789999853 332   6889988643 2233456888999999999999999999999889999999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        98 ~~~  100 (268)
T cd05063          98 RDH  100 (268)
T ss_pred             Hhc
Confidence            653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.14  E-value=1.7e-09  Score=57.28  Aligned_cols=78  Identities=24%  Similarity=0.278  Sum_probs=66.1

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.+... .+..+++|.+..... ....+..|+..+..++|+|++++.+.+......++++|++++++|.+++....
T Consensus        32 ~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  110 (286)
T cd06614          32 SGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNF  110 (286)
T ss_pred             CeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhc
Confidence            5778998855 688899999875433 45577889999999999999999999999999999999999999999988653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.14  E-value=1.4e-09  Score=56.57  Aligned_cols=78  Identities=31%  Similarity=0.403  Sum_probs=65.5

Q ss_pred             CCceEEEEcC-C---CCEEEEEEecCCCccc-HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-D---GQVIAVKRLSGRTSQG-IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~---~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+... .   +..+++|.+....... ...+..|+..+..+.|++++++++.+......++++|++++++|.+++
T Consensus         8 ~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   87 (262)
T cd00192           8 FGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYL   87 (262)
T ss_pred             ceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHH
Confidence            6889999843 3   7789999997543332 457888999999999999999999998889999999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        88 ~~~   90 (262)
T cd00192          88 RKS   90 (262)
T ss_pred             hhc
Confidence            865

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.14  E-value=1.9e-09  Score=56.32  Aligned_cols=78  Identities=19%  Similarity=0.250  Sum_probs=63.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc-----ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS-----QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+.. .++..+++|.+.....     .....+.+|+..++.+.|+|++++.+.+.....+++++|++++++|.+.
T Consensus        15 ~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~   94 (263)
T cd06625          15 FGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQ   94 (263)
T ss_pred             ceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHH
Confidence            577898874 4688999998864321     1223577888999999999999999999988999999999999999988


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus        95 ~~~~   98 (263)
T cd06625          95 LKAY   98 (263)
T ss_pred             HHHh
Confidence            8654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.14  E-value=1.6e-09  Score=57.16  Aligned_cols=79  Identities=32%  Similarity=0.394  Sum_probs=63.2

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++...      .+..+++|....... .....+..|+.+++.++|+|++++.+.+......++++|++++++|.+
T Consensus        19 ~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~   98 (277)
T cd05036          19 FGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKS   98 (277)
T ss_pred             CCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHH
Confidence            5789988843      356788898764332 233468889999999999999999998888888899999999999999


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++...+
T Consensus        99 ~i~~~~  104 (277)
T cd05036          99 FLRENR  104 (277)
T ss_pred             HHHHhC
Confidence            987543

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.14  E-value=1.7e-09  Score=63.37  Aligned_cols=78  Identities=15%  Similarity=0.151  Sum_probs=64.2

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+... .+..+|+|.++....   .....+..++..+..+.|++++.++..+......++++||+.+++|..++.
T Consensus        17 fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~   96 (669)
T cd05610          17 FGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLH   96 (669)
T ss_pred             CeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHH
Confidence            6889999854 688999999864322   123457778888888999999999999988999999999999999999886


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        97 ~~   98 (669)
T cd05610          97 IY   98 (669)
T ss_pred             hc
Confidence            54

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.14  E-value=8e-10  Score=58.47  Aligned_cols=76  Identities=17%  Similarity=0.232  Sum_probs=61.2

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++... ++..+++|.+....  ......+.+|+..+..+.|+|++++.+.+...+..++++|+++++.+..+..
T Consensus        14 ~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~   92 (287)
T cd07848          14 YGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEE   92 (287)
T ss_pred             CEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHh
Confidence            6789999854 68889999986432  2234567889999999999999999999988899999999999877665543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.14  E-value=1.5e-09  Score=57.22  Aligned_cols=78  Identities=22%  Similarity=0.351  Sum_probs=62.0

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+...      .+..+++|.+.... ......+.+|+..++.++|+|++++.+.+......++++|++++|+|.+
T Consensus        19 ~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~   98 (277)
T cd05062          19 FGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS   98 (277)
T ss_pred             CCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHH
Confidence            5788887632      24578999876432 2234467889999999999999999999988889999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++.+.
T Consensus        99 ~~~~~  103 (277)
T cd05062          99 YLRSL  103 (277)
T ss_pred             HHHHc
Confidence            98753

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.13  E-value=2.9e-09  Score=55.64  Aligned_cols=76  Identities=25%  Similarity=0.275  Sum_probs=62.2

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+....+..+++|.+.... .....+.+|+.+++.+.|++++++++.+. ....++++|++++++|.+++.+.
T Consensus        19 ~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~   94 (260)
T cd05070          19 FGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDG   94 (260)
T ss_pred             CceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhc
Confidence            678999987677789999987533 23457889999999999999999988774 45678999999999999998754

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.13  E-value=8.7e-10  Score=57.71  Aligned_cols=77  Identities=18%  Similarity=0.243  Sum_probs=63.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++. ..++..+++|.+....   ......+.+|+..++.+.|+|++++++.+...+..++++|++++++|.+++.
T Consensus        15 ~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~   94 (267)
T cd08229          15 FSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIK   94 (267)
T ss_pred             CeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHH
Confidence            57899998 4578899999876422   2233467889999999999999999999988889999999999999998886


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus        95 ~   95 (267)
T cd08229          95 H   95 (267)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.13  E-value=5.9e-11  Score=66.92  Aligned_cols=82  Identities=23%  Similarity=0.256  Sum_probs=64.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      |++|++++ ..++..+|+|+++..-   .........|-.+|..+ +||.+++++..+.+...++++++|+++|+|.++|
T Consensus        86 YStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i  165 (604)
T KOG0592|consen   86 YSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLI  165 (604)
T ss_pred             ceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHH
Confidence            56788888 5678899999996431   12223455666677777 8999999999999999999999999999999999


Q ss_pred             ccC-CCCC
Q 038959           76 FGR-SFST   82 (86)
Q Consensus        76 ~~~-~~~~   82 (86)
                      +.- ++.+
T Consensus       166 ~K~Gsfde  173 (604)
T KOG0592|consen  166 KKYGSFDE  173 (604)
T ss_pred             HHhCcchH
Confidence            863 4443

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.13  E-value=4.5e-10  Score=58.55  Aligned_cols=78  Identities=13%  Similarity=0.166  Sum_probs=64.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+... ++..+++|.+.....   .....+..|+..++.++|+|++++.+.+..+...++++|++++++|..++.
T Consensus        13 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   92 (258)
T cd05578          13 FGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLS   92 (258)
T ss_pred             CceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHH
Confidence            6789999854 688999999864321   234567888999999999999999999988999999999999999999887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        93 ~~   94 (258)
T cd05578          93 QK   94 (258)
T ss_pred             hc
Confidence            55

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.13  E-value=1.9e-10  Score=62.04  Aligned_cols=76  Identities=18%  Similarity=0.224  Sum_probs=60.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+++. +++..||+|.++....  ...-.-++|+.++..++|+||+.+...+..  -+.++++|||++. +|..++
T Consensus        89 yGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~  167 (419)
T KOG0663|consen   89 YGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLM  167 (419)
T ss_pred             ceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHH
Confidence            799999994 4788999999974332  223356899999999999999999988754  4679999999976 777776


Q ss_pred             cc
Q 038959           76 FG   77 (86)
Q Consensus        76 ~~   77 (86)
                      ..
T Consensus       168 d~  169 (419)
T KOG0663|consen  168 ET  169 (419)
T ss_pred             Hh
Confidence            53

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.13  E-value=2.4e-09  Score=57.11  Aligned_cols=77  Identities=18%  Similarity=0.261  Sum_probs=61.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+++|.+.... ......+..|+..++.++|+|++++++.+...+..++++|+++ ++|..++...
T Consensus        19 ~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~   97 (301)
T cd07873          19 YATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDC   97 (301)
T ss_pred             CEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhc
Confidence            678999984 468899999986432 2333467789999999999999999999999999999999997 5888777643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.13  E-value=3.8e-09  Score=55.25  Aligned_cols=76  Identities=25%  Similarity=0.233  Sum_probs=61.0

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+....+..+++|.+.... .....+.+|+.+++.+.|++++++.+.+. ....++++|++++++|.+++.+.
T Consensus        19 ~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~   94 (260)
T cd05069          19 FGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEG   94 (260)
T ss_pred             CCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhC
Confidence            578999986666678999876433 33456788999999999999999988764 45678999999999999998754

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.12  E-value=2.1e-09  Score=56.62  Aligned_cols=79  Identities=23%  Similarity=0.361  Sum_probs=63.3

Q ss_pred             CCceEEEEcC-----CCCEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP-----DGQVIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~-----~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++.+.     .+..+++|.+...... ....+..|+..++.+.|+|++++.+.+..  ....++++|++++++|.
T Consensus        17 ~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~   96 (284)
T cd05038          17 FGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLR   96 (284)
T ss_pred             CeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHH
Confidence            6789988743     3678999998754332 34578899999999999999999988766  55789999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++....
T Consensus        97 ~~l~~~~  103 (284)
T cd05038          97 DYLQRHR  103 (284)
T ss_pred             HHHHhCc
Confidence            9987643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.12  E-value=2e-09  Score=55.99  Aligned_cols=75  Identities=19%  Similarity=0.239  Sum_probs=63.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.+|.+... .+..+++|.+.....  ...+..|+..++.+.|+|++++.+.+......++++|++++++|.+++..
T Consensus        16 ~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~   91 (256)
T cd06612          16 YGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKI   91 (256)
T ss_pred             CeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHh
Confidence            5788999854 478899999864322  56788999999999999999999999888999999999999999998864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.12  E-value=1.2e-09  Score=59.10  Aligned_cols=77  Identities=18%  Similarity=0.131  Sum_probs=62.2

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+... .+..+|+|.+....   ......+..+..++..++|++++.+.+.+...+..++++||+++|+|.+++.
T Consensus        14 fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~   93 (332)
T cd05623          14 FGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLS   93 (332)
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHH
Confidence            6889999854 57789999985321   1122346677888888999999999999999999999999999999999987


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      +
T Consensus        94 ~   94 (332)
T cd05623          94 K   94 (332)
T ss_pred             H
Confidence            5

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.12  E-value=1.8e-09  Score=58.32  Aligned_cols=78  Identities=21%  Similarity=0.265  Sum_probs=62.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.++....   .....+..|..++..+ +|++++.+.+.+...+..++++|++++|+|..++
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   87 (327)
T cd05617           8 YAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHM   87 (327)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHH
Confidence            688999984 4678999999974321   2233466777777776 6999999999998899999999999999999887


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        88 ~~~   90 (327)
T cd05617          88 QRQ   90 (327)
T ss_pred             HHc
Confidence            654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.12  E-value=2.2e-09  Score=56.25  Aligned_cols=78  Identities=19%  Similarity=0.215  Sum_probs=60.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-----cccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-----SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. .++..+++|.+....     ......+.+|+..+..+.|+|+++..+.+..  ...+++++|++++++|.
T Consensus        15 ~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~   94 (265)
T cd06652          15 FGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIK   94 (265)
T ss_pred             ceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHH
Confidence            678999984 468899999885321     1123467789999999999999999987754  34678999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++.+.
T Consensus        95 ~~l~~~  100 (265)
T cd06652          95 DQLKSY  100 (265)
T ss_pred             HHHHHc
Confidence            988754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.11  E-value=1.6e-09  Score=58.33  Aligned_cols=78  Identities=22%  Similarity=0.225  Sum_probs=61.1

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC---cccHHHHHHHHHHHhc-CCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+... ++..+|+|.++...   .........|...+.. .+|++++.+++.+...+..++++|++++|+|..++
T Consensus         8 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i   87 (316)
T cd05620           8 FGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHI   87 (316)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHH
Confidence            6889999854 68899999986421   1223345566666654 58999999999999999999999999999999888


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        88 ~~~   90 (316)
T cd05620          88 QDK   90 (316)
T ss_pred             HHc
Confidence            754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.11  E-value=9.4e-10  Score=59.75  Aligned_cols=78  Identities=19%  Similarity=0.322  Sum_probs=60.8

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcC-CCCcccceeeeeee-CCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKP-QHTNIVRLIGCSLH-GPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+..      .++..+|+|.++.... .....+.+|+..+..+ +|+|++++.+.+.. ....++++||+++|+|
T Consensus        20 fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L   99 (343)
T cd05103          20 FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL   99 (343)
T ss_pred             cceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcH
Confidence            788999862      2467899999974332 2234678899999998 68999999987754 4567899999999999


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      .+++.+.
T Consensus       100 ~~~i~~~  106 (343)
T cd05103         100 SNYLRSK  106 (343)
T ss_pred             HHHHHhc
Confidence            9998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.11  E-value=2e-09  Score=57.67  Aligned_cols=77  Identities=18%  Similarity=0.215  Sum_probs=62.4

Q ss_pred             CceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            2 SSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         2 g~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      +.++.++ ..++..+|+|.+...  .......+..|+..++.++|+|++++.+.+...+..++++|++++|++.+++...
T Consensus        14 ~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~   93 (314)
T cd08216          14 MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTH   93 (314)
T ss_pred             ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHh
Confidence            3455555 336889999998643  2334457888999999999999999999998889999999999999999988754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.11  E-value=1.5e-09  Score=57.30  Aligned_cols=78  Identities=18%  Similarity=0.215  Sum_probs=62.7

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++... ++..+++|.+....  ......+..|+.++..+.|+|++++.+.+......++++|+++++.+..++..
T Consensus        14 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~   93 (286)
T cd07847          14 YGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKN   93 (286)
T ss_pred             CeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhC
Confidence            5789999854 68899999885322  22234577889999999999999999999999999999999999888877654


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        94 ~   94 (286)
T cd07847          94 P   94 (286)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.11  E-value=2e-09  Score=56.62  Aligned_cols=78  Identities=24%  Similarity=0.382  Sum_probs=63.0

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+...      .+..+++|.+.... ......+..++..+..+.|+|++++++.+......++++|++++|+|..
T Consensus        19 ~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~   98 (277)
T cd05032          19 FGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKS   98 (277)
T ss_pred             CceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHH
Confidence            6788988742      23678999986442 2334467888999999999999999999988899999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++.+.
T Consensus        99 ~l~~~  103 (277)
T cd05032          99 YLRSR  103 (277)
T ss_pred             HHHhc
Confidence            98754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.10  E-value=2.9e-09  Score=55.97  Aligned_cols=78  Identities=27%  Similarity=0.405  Sum_probs=62.3

Q ss_pred             CCceEEEEcC-CCC--EEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQ--VIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~--~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++... ++.  .+++|.+.... ......+..|+..+..+ +|+|++++.+.+...+..++++|++++|+|.+++
T Consensus         8 ~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i   87 (270)
T cd05047           8 FGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL   87 (270)
T ss_pred             CceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHH
Confidence            6889999854 343  46788776432 23345678899999888 8999999999998888899999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        88 ~~~   90 (270)
T cd05047          88 RKS   90 (270)
T ss_pred             Hhc
Confidence            754

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.10  E-value=5.8e-11  Score=63.86  Aligned_cols=77  Identities=23%  Similarity=0.212  Sum_probs=65.8

Q ss_pred             CceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            2 SSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         2 g~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      +.|-.++ +.++..+|||+++......+....+|+.++..+ .|+||+++++.++.....++++|-|.+|.|..+|..+
T Consensus        92 asVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~  170 (463)
T KOG0607|consen   92 ASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKR  170 (463)
T ss_pred             eeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHh
Confidence            4556666 567889999999876555667889999988886 7999999999999999999999999999999998765

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.10  E-value=3.8e-09  Score=56.08  Aligned_cols=78  Identities=18%  Similarity=0.272  Sum_probs=62.2

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++...      ....+++|.+..... .....+.+|+..+..+.|+|++++.+.+...+..++++|++.+|+|.+
T Consensus        13 ~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~   92 (290)
T cd05045          13 FGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS   92 (290)
T ss_pred             CcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHH
Confidence            6889998732      224678888764332 233568889999999999999999999988889999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++.+.
T Consensus        93 ~l~~~   97 (290)
T cd05045          93 FLRES   97 (290)
T ss_pred             HHHhc
Confidence            98754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.10  E-value=2e-09  Score=56.25  Aligned_cols=78  Identities=18%  Similarity=0.187  Sum_probs=64.7

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++... .+..+++|.+.... ......+.+|+..++.+.|+|++++.+.+...+..++++|++++++|.+++...
T Consensus        14 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   93 (265)
T cd06605          14 SGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEV   93 (265)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHc
Confidence            5778998854 68889999887542 233456888999999999999999999998889999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.10  E-value=3.7e-09  Score=55.24  Aligned_cols=78  Identities=19%  Similarity=0.317  Sum_probs=64.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.+.... ......+..|+..++.++|+|++++.+.+...+..++++|++++++|.+++...
T Consensus        14 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~   93 (267)
T cd06610          14 TAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSS   93 (267)
T ss_pred             CeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHh
Confidence            578999984 467889999986432 234457888999999999999999999998899999999999999999998754

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.10  E-value=3.4e-09  Score=56.07  Aligned_cols=78  Identities=24%  Similarity=0.362  Sum_probs=62.0

Q ss_pred             CCceEEEEc-----CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeC--CceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-----PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--PERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-----~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.+     ..+..+++|.++... ......+.+|+..++.+.|+|++++.+.+...  ...++++|++++++|.
T Consensus        17 ~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~   96 (284)
T cd05079          17 FGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLK   96 (284)
T ss_pred             ceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHH
Confidence            678888863     246789999987442 33345788999999999999999999887654  5688999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      .++.+.
T Consensus        97 ~~l~~~  102 (284)
T cd05079          97 EYLPRN  102 (284)
T ss_pred             HHHHhc
Confidence            998654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.10  E-value=1.9e-09  Score=65.16  Aligned_cols=77  Identities=22%  Similarity=0.195  Sum_probs=62.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. ..+..+++|.+....  ......+..|+.++..+.|+|++++++.+..  ...+++++||+++|+|..+|
T Consensus        26 FGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL  105 (1021)
T PTZ00266         26 FGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNI  105 (1021)
T ss_pred             CeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHH
Confidence            788999984 467788999986432  2334568889999999999999999988743  45689999999999999988


Q ss_pred             cc
Q 038959           76 FG   77 (86)
Q Consensus        76 ~~   77 (86)
                      ..
T Consensus       106 ~k  107 (1021)
T PTZ00266        106 QK  107 (1021)
T ss_pred             HH
Confidence            64

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.10  E-value=3.5e-09  Score=56.72  Aligned_cols=77  Identities=17%  Similarity=0.268  Sum_probs=61.6

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++... ++..+++|.++... ......+.+|+..++.++|+|++++++.+...+..++++|++++ ++.+++...
T Consensus        19 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~   97 (309)
T cd07872          19 YATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDC   97 (309)
T ss_pred             CEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhc
Confidence            6889999844 67889999987432 22334567899999999999999999999999999999999975 777776543

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.09  E-value=5.2e-11  Score=65.58  Aligned_cols=80  Identities=16%  Similarity=0.230  Sum_probs=69.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||+|. ..++..||+|.++.... ...+++..|+..+..+.++++.++++.+..+..+.++||++.+|++.+.+...
T Consensus        26 fG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~  105 (467)
T KOG0201|consen   26 FGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSG  105 (467)
T ss_pred             cceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccC
Confidence            89999999 56789999999985443 34567889999999999999999999999999999999999999999998866


Q ss_pred             CC
Q 038959           79 SF   80 (86)
Q Consensus        79 ~~   80 (86)
                      ..
T Consensus       106 ~~  107 (467)
T KOG0201|consen  106 NI  107 (467)
T ss_pred             CC
Confidence            54

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.09  E-value=4.1e-10  Score=62.44  Aligned_cols=82  Identities=17%  Similarity=0.110  Sum_probs=64.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCc-eEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPE-RILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.++..+. .++..+++|.+.....  .......+|+..++.+.||||+...+.+...+. ++++|+|++||++.+.|.
T Consensus        17 fG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~   96 (426)
T KOG0589|consen   17 FGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIK   96 (426)
T ss_pred             cchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHH
Confidence            566665553 3577899999975432  233356788999999999999999999988887 999999999999999998


Q ss_pred             cCCCCC
Q 038959           77 GRSFST   82 (86)
Q Consensus        77 ~~~~~~   82 (86)
                      ..+...
T Consensus        97 ~~k~~~  102 (426)
T KOG0589|consen   97 EQKGVL  102 (426)
T ss_pred             HHhhcc
Confidence            766443

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.09  E-value=3e-09  Score=57.38  Aligned_cols=78  Identities=14%  Similarity=0.172  Sum_probs=59.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHH-HHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAK-VIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+|+|.+....   ......+..+.. .++.+.|+|++++.+.+...+..++++|++++|+|..++
T Consensus         8 fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~   87 (325)
T cd05602           8 FGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL   87 (325)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHH
Confidence            788999984 467889999986321   112223444443 456789999999999999999999999999999999888


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        88 ~~~   90 (325)
T cd05602          88 QRE   90 (325)
T ss_pred             Hhc
Confidence            754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.09  E-value=2.6e-09  Score=57.37  Aligned_cols=77  Identities=25%  Similarity=0.353  Sum_probs=60.4

Q ss_pred             CCceEEEEcC-CCC----EEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP-DGQ----VIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~-~~~----~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|.+. .+.    .+++|.++... ......+..|+.+++.+.|+|++++++.+... ...++++++++|+|.++
T Consensus        20 ~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~   98 (316)
T cd05108          20 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDY   98 (316)
T ss_pred             CceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHH
Confidence            6899999843 333    48999986432 23445788899999999999999999988654 56789999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +.+.
T Consensus        99 l~~~  102 (316)
T cd05108          99 VREH  102 (316)
T ss_pred             HHhc
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.09  E-value=2.6e-09  Score=56.88  Aligned_cols=68  Identities=24%  Similarity=0.413  Sum_probs=56.0

Q ss_pred             CCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959           12 GQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus        12 ~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      +..+++|.+.... ......+..|+..++.++|+|++++++.+...+..++++|++++|+|.+++....
T Consensus        46 ~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  114 (296)
T cd05095          46 PVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHE  114 (296)
T ss_pred             eeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcC
Confidence            3468889886432 2334578899999999999999999999988899999999999999999987643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=3e-09  Score=55.17  Aligned_cols=78  Identities=22%  Similarity=0.299  Sum_probs=64.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.+|.+.. ..+..+++|.+.....  .....+..|+..+..+.|++++++.+.+...+..+++++++++++|.+++..
T Consensus        13 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   92 (254)
T cd06627          13 FGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKK   92 (254)
T ss_pred             CeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHh
Confidence            577898874 4678899999975433  3445788899999999999999999999888999999999999999998875


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        93 ~   93 (254)
T cd06627          93 F   93 (254)
T ss_pred             c
Confidence            4

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.09  E-value=3.4e-09  Score=55.95  Aligned_cols=77  Identities=21%  Similarity=0.326  Sum_probs=61.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++... ++..+++|.++... ......+..|+..++.+.|+|++++.+.+...+..++++|++++ +|.+++...
T Consensus        13 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~   91 (284)
T cd07836          13 YATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTH   91 (284)
T ss_pred             ceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhc
Confidence            5789999854 68889999987432 22334567889999999999999999999999999999999985 788777643

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.09  E-value=1.8e-09  Score=57.43  Aligned_cols=65  Identities=28%  Similarity=0.497  Sum_probs=54.4

Q ss_pred             EEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959           14 VIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus        14 ~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      .+++|.++... ......+.+|+..+..+.|+|++++.+.+...+..++++|++++++|.+++...
T Consensus        46 ~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  111 (295)
T cd05097          46 LVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQR  111 (295)
T ss_pred             EEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhc
Confidence            58899887542 223346888999999999999999999999889999999999999999988643

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.08  E-value=3.7e-09  Score=56.04  Aligned_cols=77  Identities=21%  Similarity=0.299  Sum_probs=61.4

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++... ++..+++|.+.... ......+.+|+..++.++|+|++++++.+......++++|++++ +|.+++...
T Consensus        18 ~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~   96 (291)
T cd07844          18 YATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDC   96 (291)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhC
Confidence            5789999854 67899999986432 12223466799999999999999999999989999999999975 888877643

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.08  E-value=5.8e-09  Score=53.90  Aligned_cols=78  Identities=23%  Similarity=0.316  Sum_probs=66.3

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.+|++... ++..+++|.+..........+.+|+..+..+.|++++++.+.+......+++++++++++|.+++...
T Consensus        13 ~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~   91 (253)
T cd05122          13 FGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKST   91 (253)
T ss_pred             ceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhc
Confidence            5778998854 68889999997654445567889999999999999999999998889999999999999999988765

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.08  E-value=2.7e-09  Score=54.77  Aligned_cols=79  Identities=20%  Similarity=0.223  Sum_probs=66.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCccc-HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQG-IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+... ++..+++|.+....... ...+..|+..++.+.|++++++.+.+......++++|+.++++|..++...
T Consensus         2 ~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~   81 (244)
T smart00220        2 FGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKR   81 (244)
T ss_pred             ceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhc
Confidence            6899999955 58899999997544333 567888999999999999999999998888999999999999999988754


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus        82 ~   82 (244)
T smart00220       82 G   82 (244)
T ss_pred             c
Confidence            3

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.07  E-value=3.6e-09  Score=55.24  Aligned_cols=78  Identities=24%  Similarity=0.281  Sum_probs=61.0

Q ss_pred             CCceEEEEc---CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL---PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~---~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+|.+   .++..+++|.++...  ......+..|+..+..++|+|++++.+.+. ....++++|++++|+|.+++
T Consensus         8 ~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l   86 (257)
T cd05116           8 FGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFL   86 (257)
T ss_pred             CcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHH
Confidence            688999863   356789999986432  223456788899999999999999998774 45678999999999999988


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus        87 ~~~~   90 (257)
T cd05116          87 QKNK   90 (257)
T ss_pred             HhcC
Confidence            7543

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.07  E-value=6.7e-09  Score=54.87  Aligned_cols=76  Identities=21%  Similarity=0.322  Sum_probs=61.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++.. .++..+++|.+....  ......+..|+..+..+.|+|++++.+.+..++..++++|+++ ++|..++..
T Consensus        13 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~   91 (285)
T cd07861          13 YGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDS   91 (285)
T ss_pred             ceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhc
Confidence            578999984 468899999986432  2233567788999999999999999999998999999999997 578887764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.06  E-value=8.5e-10  Score=57.80  Aligned_cols=78  Identities=27%  Similarity=0.376  Sum_probs=62.1

Q ss_pred             CCceEEEEcCC-------CCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLPD-------GQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~~-------~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+....       +..+++|.+.... ......+.+++..++.++|++++++.+.+......++++|++++++|.
T Consensus         8 ~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   87 (269)
T cd05044           8 FGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLL   87 (269)
T ss_pred             ceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHH
Confidence            67899887421       2467888875432 233457888999999999999999999998888999999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++.+.
T Consensus        88 ~~l~~~   93 (269)
T cd05044          88 SYLRDA   93 (269)
T ss_pred             HHHHHh
Confidence            998753

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.06  E-value=3.4e-09  Score=57.22  Aligned_cols=78  Identities=15%  Similarity=0.161  Sum_probs=59.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.+....   ......+..|..++..+ +|+++..+.+.+...+..++++|++++|+|..++
T Consensus        13 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i   92 (323)
T cd05615          13 FGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI   92 (323)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHH
Confidence            688999984 468899999986321   12223456677777766 4677888888888888999999999999999988


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      .+.
T Consensus        93 ~~~   95 (323)
T cd05615          93 QQV   95 (323)
T ss_pred             HHc
Confidence            754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.06  E-value=4.3e-09  Score=56.78  Aligned_cols=78  Identities=17%  Similarity=0.190  Sum_probs=60.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCC-CcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQH-TNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+|+|.+....   ......+..|...+..+.| ++++.+.+.+...+..++++|++++|+|..++
T Consensus        13 ~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~   92 (324)
T cd05587          13 FGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI   92 (324)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHH
Confidence            688999984 467899999986321   1233456677778877765 55778888888888999999999999999888


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        93 ~~~   95 (324)
T cd05587          93 QQV   95 (324)
T ss_pred             HHc
Confidence            654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.05  E-value=4.9e-09  Score=56.07  Aligned_cols=78  Identities=27%  Similarity=0.405  Sum_probs=60.9

Q ss_pred             CCceEEEEcC-CCC--EEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQ--VIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~--~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++... ++.  .+++|.+.... ......+..|+..+..+ +|+|++++.+.+...+..++++|++++|+|.+++
T Consensus        20 ~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l   99 (303)
T cd05088          20 FGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL   99 (303)
T ss_pred             CceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHH
Confidence            6889999853 444  45677665322 22334677888888888 8999999999998889999999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       100 ~~~  102 (303)
T cd05088         100 RKS  102 (303)
T ss_pred             Hhc
Confidence            754

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.05  E-value=3.8e-09  Score=55.80  Aligned_cols=77  Identities=22%  Similarity=0.302  Sum_probs=61.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++.. .++..+++|.+....  ......+..|+..++.++|+|++++.+.+......++++|+++ ++|..++..
T Consensus        13 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~   91 (284)
T cd07860          13 YGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDA   91 (284)
T ss_pred             ceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHh
Confidence            578999984 468899999886332  2223467889999999999999999999988899999999996 578888765


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        92 ~   92 (284)
T cd07860          92 S   92 (284)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.05  E-value=9.1e-10  Score=64.44  Aligned_cols=78  Identities=23%  Similarity=0.285  Sum_probs=61.4

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCcccceeee-eee----C--CceEEEEeccCCCCh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-HTNIVRLIGC-SLH----G--PERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~-~~~----~--~~~~l~~e~~~~g~l   71 (86)
                      |+.||.+... .+..+|+|.+-.........+.+|+.+|+.+. |+||+.+++. ...    .  -.++|+||||++|.|
T Consensus        50 Fa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~L  129 (738)
T KOG1989|consen   50 FAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSL  129 (738)
T ss_pred             cEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcH
Confidence            7889999854 45899999887555555567899999999985 9999999983 211    1  347799999999999


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      .++|+..
T Consensus       130 vd~mn~R  136 (738)
T KOG1989|consen  130 VDFMNTR  136 (738)
T ss_pred             HHHHHHH
Confidence            9999843

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.05  E-value=4.7e-09  Score=56.06  Aligned_cols=79  Identities=16%  Similarity=0.322  Sum_probs=62.2

Q ss_pred             CCceEEEEc--------CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKL--------PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~--------~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      ||.||.+..        ..+..+++|.+.... ......+..|+..+..+ .|+|++++.+.+......++++|++++|+
T Consensus        28 ~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  107 (304)
T cd05101          28 FGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN  107 (304)
T ss_pred             CceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCc
Confidence            678888862        123468899886432 23345688899999888 89999999999988889999999999999


Q ss_pred             hhhhhccCC
Q 038959           71 LDFFIFGRS   79 (86)
Q Consensus        71 l~~~l~~~~   79 (86)
                      |.+++.+.+
T Consensus       108 L~~~l~~~~  116 (304)
T cd05101         108 LREYLRARR  116 (304)
T ss_pred             HHHHHHhcC
Confidence            999997643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.05  E-value=7.5e-09  Score=53.68  Aligned_cols=79  Identities=20%  Similarity=0.263  Sum_probs=65.1

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeC--CceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--PERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+... ++..+++|.+.....  .....+..++..++.+.|+|++++.+.+...  ...++++|++++++|.+++
T Consensus        13 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   92 (260)
T cd06606          13 FGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLL   92 (260)
T ss_pred             ceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHH
Confidence            5789999854 688999999875432  3345678899999999999999999988877  8899999999999999988


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      .+..
T Consensus        93 ~~~~   96 (260)
T cd06606          93 KKFG   96 (260)
T ss_pred             HHcC
Confidence            7653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.05  E-value=7.3e-09  Score=54.94  Aligned_cols=76  Identities=20%  Similarity=0.250  Sum_probs=60.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      +|.||.+.. ..+..+++|.+..... .....+.+|+..++.++|+|++++.+.+..  .+.+++++|++++++|.+++.
T Consensus        14 ~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   93 (287)
T cd06621          14 GGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYK   93 (287)
T ss_pred             ceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHH
Confidence            577898885 4678899999874322 234568889999999999999999988753  456899999999999988765

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.05  E-value=6e-09  Score=55.77  Aligned_cols=79  Identities=16%  Similarity=0.283  Sum_probs=61.9

Q ss_pred             CCceEEEEcC--------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKLP--------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~~--------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      ||.||.+...        ....+++|.++... ......+..|+..+..+ .|++++++.+.+...+..++++|++++|+
T Consensus        31 ~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (307)
T cd05098          31 FGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN  110 (307)
T ss_pred             CeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCc
Confidence            6788887631        12468999887432 22334677888888888 79999999999988899999999999999


Q ss_pred             hhhhhccCC
Q 038959           71 LDFFIFGRS   79 (86)
Q Consensus        71 l~~~l~~~~   79 (86)
                      |.+++...+
T Consensus       111 L~~~i~~~~  119 (307)
T cd05098         111 LREYLRARR  119 (307)
T ss_pred             HHHHHHhcC
Confidence            999997643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.04  E-value=7.3e-09  Score=54.68  Aligned_cols=78  Identities=18%  Similarity=0.307  Sum_probs=61.9

Q ss_pred             CCceEEEEcCC-----CCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeee-CCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLPD-----GQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH-GPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~~-----~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.|....     +..+++|.+.... ......+..|...+..+.|+|++++.+.+.. +...+++++++++|+|.+
T Consensus        19 ~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~   98 (280)
T cd05043          19 FGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKL   98 (280)
T ss_pred             CceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHH
Confidence            68899998543     5778899886432 2334567889999999999999999998755 577889999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus        99 ~l~~~  103 (280)
T cd05043          99 FLQQC  103 (280)
T ss_pred             HHHhc
Confidence            98764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.04  E-value=1.1e-08  Score=54.01  Aligned_cols=77  Identities=29%  Similarity=0.406  Sum_probs=60.9

Q ss_pred             CCceEEEEcC-CCC----EEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP-DGQ----VIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~-~~~----~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++... ++.    .+++|.+..... .....+.+|+..+..+.|+|++++.+.+.. ...++++|++++|+|.++
T Consensus        20 ~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~   98 (279)
T cd05057          20 FGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDY   98 (279)
T ss_pred             CccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHH
Confidence            6889998743 332    578888764432 234578889999999999999999998876 788999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +.+.
T Consensus        99 l~~~  102 (279)
T cd05057          99 VRNH  102 (279)
T ss_pred             HHhc
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.04  E-value=5.8e-09  Score=54.80  Aligned_cols=77  Identities=25%  Similarity=0.259  Sum_probs=59.9

Q ss_pred             CCceEEEEcC-C---CCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-D---GQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~---~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+|... .   ...+++|...... ....+.+..|+..++.+.|+|++++.+.+.. +..++++|++++|+|.+++
T Consensus        19 ~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l   97 (270)
T cd05056          19 FGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYL   97 (270)
T ss_pred             ceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHH
Confidence            6789998742 2   2467888876443 3344578889999999999999999988764 4567999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        98 ~~~  100 (270)
T cd05056          98 QVN  100 (270)
T ss_pred             HhC
Confidence            754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.03  E-value=1.7e-09  Score=57.14  Aligned_cols=78  Identities=22%  Similarity=0.243  Sum_probs=62.8

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++... .+..+++|.+.....  .....+..|+..+..+.|+|++++.+.+......++++|+++++.+..+...
T Consensus        14 ~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   93 (286)
T cd07846          14 YGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKY   93 (286)
T ss_pred             CeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhc
Confidence            5789999854 588999998763321  2234677889999999999999999999989999999999999888877654


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        94 ~   94 (286)
T cd07846          94 P   94 (286)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.03  E-value=5.9e-09  Score=55.14  Aligned_cols=75  Identities=21%  Similarity=0.219  Sum_probs=58.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeee-----eCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSL-----HGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-----~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++.. ..+..+++|.+.... .....+..|+..+..+ +|+|++++.+.+.     ..+..++++|++++++|.+
T Consensus        31 ~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~  109 (286)
T cd06638          31 YGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTD  109 (286)
T ss_pred             CcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHH
Confidence            678999884 467889999876422 2234567788888887 7999999998763     3456899999999999998


Q ss_pred             hhc
Q 038959           74 FIF   76 (86)
Q Consensus        74 ~l~   76 (86)
                      ++.
T Consensus       110 ~l~  112 (286)
T cd06638         110 LVK  112 (286)
T ss_pred             HHH
Confidence            775

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.03  E-value=9.9e-09  Score=53.28  Aligned_cols=78  Identities=18%  Similarity=0.185  Sum_probs=64.6

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+... ++..+++|.+.....  .....+..|+..++.+.|+|++++.+.+...+..++++|++++++|.+++..
T Consensus        13 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   92 (258)
T cd08215          13 FGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKK   92 (258)
T ss_pred             CeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHH
Confidence            5778888843 688899999875432  3445678899999999999999999998888999999999999999998876


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        93 ~   93 (258)
T cd08215          93 Q   93 (258)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.03  E-value=1.9e-10  Score=62.19  Aligned_cols=78  Identities=15%  Similarity=0.155  Sum_probs=65.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCccc---HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQG---IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||+|..++ ..++..+|+|+++....-.   ...-+.|..+++...||.+..+...+...+.++++|||..+|+|+.++.
T Consensus       181 FGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLs  260 (516)
T KOG0690|consen  181 FGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLS  260 (516)
T ss_pred             cceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehh
Confidence            78888888 4579999999997543322   2345678889999999999999999999999999999999999998887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      +.
T Consensus       261 re  262 (516)
T KOG0690|consen  261 RE  262 (516)
T ss_pred             hh
Confidence            54

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.03  E-value=1.8e-08  Score=52.93  Aligned_cols=78  Identities=24%  Similarity=0.293  Sum_probs=61.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeC------CceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHG------PERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~------~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. ..+..+++|.+.... .....+..|+..+..+ +|+|++++.+.+...      ...++++|++++++|.
T Consensus        19 ~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~   97 (272)
T cd06637          19 YGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVT   97 (272)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHH
Confidence            688999984 468889999986432 3345677888888887 799999999887542      4578999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++....
T Consensus        98 ~~l~~~~  104 (272)
T cd06637          98 DLIKNTK  104 (272)
T ss_pred             HHHHhcc
Confidence            9887643

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.02  E-value=1.7e-10  Score=61.81  Aligned_cols=78  Identities=17%  Similarity=0.257  Sum_probs=66.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||++. ...|..+|+|....  ..+.+.+..|+.++++++.+.++++++.+.....+.++||||.-|+..+.++-++
T Consensus        46 YGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~  123 (502)
T KOG0574|consen   46 YGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARR  123 (502)
T ss_pred             chHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhc
Confidence            56677776 45788999998753  3567789999999999999999999999999999999999999999999988544


Q ss_pred             C
Q 038959           80 F   80 (86)
Q Consensus        80 ~   80 (86)
                      .
T Consensus       124 K  124 (502)
T KOG0574|consen  124 K  124 (502)
T ss_pred             C
Confidence            3

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.02  E-value=9.8e-09  Score=54.27  Aligned_cols=76  Identities=26%  Similarity=0.402  Sum_probs=61.5

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||+|...      .+..+++|.++.... .....+..|...+..++|+|++++.+.+......+++++++++++|.+
T Consensus        18 ~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~   97 (283)
T cd05091          18 FGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHE   97 (283)
T ss_pred             CCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHH
Confidence            6889999742      246799999874332 223467788888899999999999999988889999999999999999


Q ss_pred             hhc
Q 038959           74 FIF   76 (86)
Q Consensus        74 ~l~   76 (86)
                      ++.
T Consensus        98 ~l~  100 (283)
T cd05091          98 FLV  100 (283)
T ss_pred             HHH
Confidence            885

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.02  E-value=3.3e-09  Score=54.99  Aligned_cols=79  Identities=19%  Similarity=0.187  Sum_probs=64.7

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.+|.+... .+..+++|.+......   ....+..|+..++.+.|+|++++.+.+......++++|++++++|.+++.
T Consensus         6 ~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~   85 (250)
T cd05123           6 FGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLS   85 (250)
T ss_pred             ceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHH
Confidence            5789998844 5889999998754322   23467788889999999999999999988999999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      +..
T Consensus        86 ~~~   88 (250)
T cd05123          86 KEG   88 (250)
T ss_pred             hcC
Confidence            653

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.02  E-value=9.8e-09  Score=55.48  Aligned_cols=77  Identities=18%  Similarity=0.247  Sum_probs=59.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeC-----CceEEEEeccCCCChh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG-----PERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+. ..++..+|+|.+...  .......+.+|+.+++.+.|+|++++.+.+...     ...++++|+++ ++|.
T Consensus        13 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~   91 (338)
T cd07859          13 YGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLH   91 (338)
T ss_pred             CeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHH
Confidence            68899998 447889999998632  222334678899999999999999998877533     24789999995 6888


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++...
T Consensus        92 ~~l~~~   97 (338)
T cd07859          92 QVIKAN   97 (338)
T ss_pred             HHHHhc
Confidence            887654

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.02  E-value=9.5e-09  Score=54.56  Aligned_cols=78  Identities=21%  Similarity=0.343  Sum_probs=61.5

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCC-CcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++...      ....+++|.+... .......+.+|+..+..+ .|+|++++.+.+...+..++++|++++|+|.
T Consensus        25 ~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~  104 (293)
T cd05053          25 FGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLR  104 (293)
T ss_pred             cccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHH
Confidence            5788888742      2357889988643 222334577888888888 7999999999998888999999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      .++...
T Consensus       105 ~~l~~~  110 (293)
T cd05053         105 DFLRAR  110 (293)
T ss_pred             HHHHhc
Confidence            998653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.01  E-value=1.8e-08  Score=52.55  Aligned_cols=76  Identities=26%  Similarity=0.380  Sum_probs=60.6

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeee-eeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCS-LHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||++.. .+..+++|..+..  .....+..|+..++.+.|++++++.+.+ ...+..++++|++++++|.+++....
T Consensus        19 ~~~v~~~~~-~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~   95 (256)
T cd05082          19 FGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG   95 (256)
T ss_pred             CCeEEEEEE-cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcC
Confidence            577888865 3677899988643  2345688899999999999999999875 45667899999999999999987543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.01  E-value=1.2e-08  Score=53.57  Aligned_cols=78  Identities=18%  Similarity=0.240  Sum_probs=60.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc-----ccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS-----QGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++.. .++..+++|.+.....     .....+.+|+.+++.++|+|++++.+.+..  ....++++|++++++|.
T Consensus        15 ~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~   94 (266)
T cd06651          15 FGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVK   94 (266)
T ss_pred             CEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHH
Confidence            678999984 4688999998863211     123457788999999999999999988754  45678999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++.+.
T Consensus        95 ~~l~~~  100 (266)
T cd06651          95 DQLKAY  100 (266)
T ss_pred             HHHHHc
Confidence            988754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.01  E-value=1e-08  Score=54.50  Aligned_cols=67  Identities=27%  Similarity=0.454  Sum_probs=55.4

Q ss_pred             CEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959           13 QVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus        13 ~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ..+++|.+.... ....+.+..|+.++..+.|+|++++.+.+...+..++++|++++++|..++....
T Consensus        47 ~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  114 (296)
T cd05051          47 VLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHV  114 (296)
T ss_pred             eeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcc
Confidence            457899887443 2334578889999999999999999999988889999999999999999987543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.01  E-value=7.7e-09  Score=55.91  Aligned_cols=79  Identities=16%  Similarity=0.176  Sum_probs=58.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcC---CCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKP---QHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.. .++..+|+|.+.....   ........+..++...   .|++++.+...+...+..++++|++++|+|..
T Consensus         6 ~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~   85 (330)
T cd05586           6 FGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFW   85 (330)
T ss_pred             ceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHH
Confidence            789999984 4688999999853211   1112334444555443   79999999999999999999999999999998


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++....
T Consensus        86 ~l~~~~   91 (330)
T cd05586          86 HLQKEG   91 (330)
T ss_pred             HHHhcC
Confidence            886543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.01  E-value=1.1e-08  Score=55.18  Aligned_cols=78  Identities=15%  Similarity=0.152  Sum_probs=59.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+|+|.+....   .........+...+... +|++++.+.+.+...+..++++|++++|+|...+
T Consensus        13 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~   92 (323)
T cd05616          13 FGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQI   92 (323)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHH
Confidence            688999984 467899999986432   11223445566666655 6888999999998889999999999999999888


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        93 ~~~   95 (323)
T cd05616          93 QQV   95 (323)
T ss_pred             HHc
Confidence            654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.00  E-value=8.5e-09  Score=54.97  Aligned_cols=78  Identities=23%  Similarity=0.324  Sum_probs=61.3

Q ss_pred             CCceEEEEcC-CCC--EEEEEEecCC-CcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQ--VIAVKRLSGR-TSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~--~~~~k~~~~~-~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++... ++.  .+++|.++.. .......+..|+..+..+ +|+|++++.+.+...+..++++|++++|+|.+++
T Consensus        15 ~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l   94 (297)
T cd05089          15 FGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFL   94 (297)
T ss_pred             cceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHH
Confidence            6889999854 332  4678877632 223345678898888888 7999999999998888899999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        95 ~~~   97 (297)
T cd05089          95 RKS   97 (297)
T ss_pred             Hhc
Confidence            754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.00  E-value=1.3e-08  Score=53.10  Aligned_cols=78  Identities=35%  Similarity=0.412  Sum_probs=61.3

Q ss_pred             CCceEEEEcC-C---CCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-D---GQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~---~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+|.+. .   +..+++|.+..... .....+..|+..++.+.|++++++.+.+. .+..+++++++++|+|.+++
T Consensus         8 ~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l   86 (257)
T cd05060           8 FGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYL   86 (257)
T ss_pred             ceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHH
Confidence            6889998743 2   26889999875433 23456888999999999999999998765 45678999999999999998


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      .+..
T Consensus        87 ~~~~   90 (257)
T cd05060          87 KKRR   90 (257)
T ss_pred             HhCC
Confidence            7654

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.00  E-value=1.8e-08  Score=54.27  Aligned_cols=76  Identities=20%  Similarity=0.260  Sum_probs=59.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+++|.+....   ......+..|+..++.++|+|++++.+.+......++++|++++ ++.+.+.
T Consensus        38 ~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~  116 (317)
T cd06635          38 FGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLE  116 (317)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHH
Confidence            678999884 468899999986322   12234678899999999999999999999988899999999974 7776664


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus       117 ~  117 (317)
T cd06635         117 V  117 (317)
T ss_pred             H
Confidence            3

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.00  E-value=7.5e-09  Score=54.71  Aligned_cols=77  Identities=21%  Similarity=0.286  Sum_probs=61.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++... ++..+++|.++...  ......+..|+..++.+.|+|++++.+.+...+..++++|+++++.+..+...
T Consensus        14 ~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~   93 (288)
T cd07833          14 YGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEAS   93 (288)
T ss_pred             CeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhc
Confidence            5778998844 68899999886432  22345688899999999999999999999889999999999998777666554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.00  E-value=1.5e-08  Score=54.87  Aligned_cols=78  Identities=17%  Similarity=0.300  Sum_probs=61.2

Q ss_pred             CCceEEEEc-C-------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKL-P-------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~-~-------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      ||.||.+.. .       ....+++|.++... ......+..|+..+..+ .|+|++++.+.+...+..++++|++++|+
T Consensus        25 ~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~  104 (334)
T cd05100          25 FGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGN  104 (334)
T ss_pred             CCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCc
Confidence            678888862 1       12367899876432 23345788899999888 79999999999988889999999999999


Q ss_pred             hhhhhccC
Q 038959           71 LDFFIFGR   78 (86)
Q Consensus        71 l~~~l~~~   78 (86)
                      |.+++.+.
T Consensus       105 L~~~l~~~  112 (334)
T cd05100         105 LREYLRAR  112 (334)
T ss_pred             HHHHHHhc
Confidence            99998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.00  E-value=1.6e-08  Score=53.03  Aligned_cols=78  Identities=27%  Similarity=0.446  Sum_probs=59.7

Q ss_pred             CCceEEEEcC-C---CCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCc------eEEEEeccCC
Q 038959            1 GSSLLQGKLP-D---GQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPE------RILVYEFMPN   68 (86)
Q Consensus         1 fg~v~~~~~~-~---~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------~~l~~e~~~~   68 (86)
                      ||.||.+... .   +..+++|.+.....  .....+..|+..++.++|+|++++++.+.....      .++++|++++
T Consensus        12 ~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~   91 (273)
T cd05035          12 FGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKH   91 (273)
T ss_pred             CceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCC
Confidence            6889998743 2   36799999874322  223467888999999999999999988755443      7899999999


Q ss_pred             CChhhhhccC
Q 038959           69 KSLDFFIFGR   78 (86)
Q Consensus        69 g~l~~~l~~~   78 (86)
                      |+|..++...
T Consensus        92 ~~l~~~l~~~  101 (273)
T cd05035          92 GDLHSFLLYS  101 (273)
T ss_pred             CCHHHHHHHh
Confidence            9999887543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.99  E-value=1.2e-08  Score=55.16  Aligned_cols=79  Identities=14%  Similarity=0.194  Sum_probs=61.7

Q ss_pred             CCceEEEEc----CCCCEEEEEEecCCC----cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL----PDGQVIAVKRLSGRT----SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~----~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+..    .++..+|+|.+....    ......+..|..++..+ +|++++.+.+.+...+..++++||+++|+|
T Consensus        13 ~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   92 (332)
T cd05614          13 YGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEM   92 (332)
T ss_pred             CEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcH
Confidence            688998763    257889999986321    12234567788888888 589999999998888899999999999999


Q ss_pred             hhhhccCC
Q 038959           72 DFFIFGRS   79 (86)
Q Consensus        72 ~~~l~~~~   79 (86)
                      ..++....
T Consensus        93 ~~~l~~~~  100 (332)
T cd05614          93 FTHLYQRD  100 (332)
T ss_pred             HHHHHHcC
Confidence            99887543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.99  E-value=1.6e-08  Score=52.68  Aligned_cols=75  Identities=35%  Similarity=0.495  Sum_probs=59.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.+.. .+..+++|..+..  .....+..|+..+..++|+|++++.+.+... ..++++|++++++|.+++.+..
T Consensus        19 ~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~   93 (254)
T cd05083          19 FGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRG   93 (254)
T ss_pred             CCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcC
Confidence            678888764 5677899988643  2345788899999999999999999887544 4789999999999999987653

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.99  E-value=1.4e-09  Score=60.84  Aligned_cols=74  Identities=31%  Similarity=0.458  Sum_probs=58.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHh--cCCCCcccceeeeeeeCC----ceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIA--KPQHTNIVRLIGCSLHGP----ERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~----~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|.+ .++.||||++..   .+.+.|..|-.+..  .+.|+||+++++.-....    ...++++|-+.|+|.++
T Consensus       223 fg~V~KaqL-~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dy  298 (534)
T KOG3653|consen  223 FGCVWKAQL-DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDY  298 (534)
T ss_pred             cceeehhhc-cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHH
Confidence            789999987 458999999953   45566777666555  468999999988765444    67899999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       299 L~~n  302 (534)
T KOG3653|consen  299 LKAN  302 (534)
T ss_pred             HHhc
Confidence            9854

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.99  E-value=1.9e-08  Score=53.43  Aligned_cols=76  Identities=24%  Similarity=0.297  Sum_probs=59.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .++..+++|.+..... .....+.+|+..++.+.|+|++++.+.+......++++|++. +++.+++..
T Consensus        18 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~   95 (291)
T cd07870          18 YATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQ   95 (291)
T ss_pred             CEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHh
Confidence            578999984 4688999999864322 223356788889999999999999999988889999999996 677766653

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.98  E-value=1.8e-08  Score=52.72  Aligned_cols=78  Identities=23%  Similarity=0.330  Sum_probs=60.0

Q ss_pred             CCceEEEEcC----CCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeee-eCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP----DGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSL-HGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++...    ....+++|.+... .......+..|...++.++|+|++++.+.+. ..+..+++++++++|+|.++
T Consensus         8 ~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~   87 (262)
T cd05058           8 FGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNF   87 (262)
T ss_pred             CceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHH
Confidence            6889998742    2346889987532 2233456778888999999999999999765 45568899999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +.+.
T Consensus        88 ~~~~   91 (262)
T cd05058          88 IRSE   91 (262)
T ss_pred             HHhc
Confidence            8754

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.98  E-value=5.9e-09  Score=54.31  Aligned_cols=76  Identities=24%  Similarity=0.311  Sum_probs=62.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHH--HHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIV--EFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++... .+..+++|.+.........  ....|+..+..+.|++++++.+........+++++++++++|..++.
T Consensus        12 ~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~   90 (260)
T PF00069_consen   12 FGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ   90 (260)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH
T ss_pred             CEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccccccccccc
Confidence            6889999954 5678999999865443332  33558888888999999999999999999999999999999998887

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.98  E-value=1.1e-08  Score=53.28  Aligned_cols=78  Identities=17%  Similarity=0.241  Sum_probs=61.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeee--eCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSL--HGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++. ..++..+++|.+....  ......+..++..++.+.|+|++++.+.+.  .....++++|++++++|.+++
T Consensus        13 ~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l   92 (265)
T cd08217          13 FGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLI   92 (265)
T ss_pred             CeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHH
Confidence            57889887 4467889999886432  233446778899999999999999988664  345688999999999999988


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      .+.
T Consensus        93 ~~~   95 (265)
T cd08217          93 QKC   95 (265)
T ss_pred             HHH
Confidence            653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.98  E-value=1.5e-08  Score=54.40  Aligned_cols=78  Identities=18%  Similarity=0.325  Sum_probs=60.7

Q ss_pred             CCceEEEEc-C-------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKL-P-------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~-~-------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      ||.||.+.. .       ....+++|.++... ......+..|+..+..+ +|+|++++.+.+......++++|++++|+
T Consensus        25 ~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~  104 (314)
T cd05099          25 FGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGN  104 (314)
T ss_pred             cccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCc
Confidence            577888752 1       23468889886432 22334678888888888 69999999999988888999999999999


Q ss_pred             hhhhhccC
Q 038959           71 LDFFIFGR   78 (86)
Q Consensus        71 l~~~l~~~   78 (86)
                      |.+++...
T Consensus       105 L~~~i~~~  112 (314)
T cd05099         105 LREFLRAR  112 (314)
T ss_pred             HHHHHHhc
Confidence            99998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.98  E-value=2e-08  Score=53.37  Aligned_cols=77  Identities=19%  Similarity=0.199  Sum_probs=61.0

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++... ++..+++|.+.....  .....+..|+..++.++|+|++++.+.+......++++|+++ +++..++..
T Consensus        15 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~   93 (294)
T PLN00009         15 YGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDS   93 (294)
T ss_pred             CEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHh
Confidence            5789999854 688999998864321  223467788999999999999999999999999999999996 477777654


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        94 ~   94 (294)
T PLN00009         94 S   94 (294)
T ss_pred             C
Confidence            3

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.98  E-value=1.4e-08  Score=54.95  Aligned_cols=77  Identities=18%  Similarity=0.217  Sum_probs=60.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCccc--------------HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEec
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQG--------------IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF   65 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~   65 (86)
                      ||.||++.. ..+..+++|.+.......              ...+..|+.++..+.|+|++++.+.+...+..++++|+
T Consensus        22 ~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  101 (335)
T PTZ00024         22 YGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDI  101 (335)
T ss_pred             ceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEec
Confidence            688999984 468899999886332111              11467889999999999999999999889999999999


Q ss_pred             cCCCChhhhhccC
Q 038959           66 MPNKSLDFFIFGR   78 (86)
Q Consensus        66 ~~~g~l~~~l~~~   78 (86)
                      +. |+|.+++...
T Consensus       102 ~~-~~l~~~l~~~  113 (335)
T PTZ00024        102 MA-SDLKKVVDRK  113 (335)
T ss_pred             cc-cCHHHHHHhc
Confidence            96 5888887653

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.98  E-value=1.9e-08  Score=52.39  Aligned_cols=78  Identities=18%  Similarity=0.152  Sum_probs=60.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeee-CCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH-GPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+++|.+....  ......+..++..++.++|++++++.+.+.. ...+++++|++++++|.+++.
T Consensus        13 ~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~   92 (257)
T cd08223          13 YGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLK   92 (257)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHH
Confidence            577888884 457789999986432  2233467788889999999999999887653 456889999999999999887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        93 ~~   94 (257)
T cd08223          93 EQ   94 (257)
T ss_pred             Hh
Confidence            54

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.97  E-value=1.1e-08  Score=54.73  Aligned_cols=75  Identities=19%  Similarity=0.263  Sum_probs=59.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. ..+..+++|.+.....   .....+..|+..++.++|+|++++.+.+......++++|+++ |++.+++.
T Consensus        28 ~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~  106 (307)
T cd06607          28 FGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILE  106 (307)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHH
Confidence            678999984 4688999998863321   223467889999999999999999999999999999999996 56666554

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.97  E-value=1.3e-08  Score=57.95  Aligned_cols=78  Identities=19%  Similarity=0.130  Sum_probs=59.9

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC--------ceEEEEeccCCC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP--------ERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------~~~l~~e~~~~g   69 (86)
                      ||.||++. ..++..+|+|.++...  ......+..|+..+..+.|++++.++..+....        .+++++||+++|
T Consensus        45 fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~g  124 (496)
T PTZ00283         45 TGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAG  124 (496)
T ss_pred             CEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCC
Confidence            78899998 4578999999986432  223345778888899999999999877654321        367999999999


Q ss_pred             ChhhhhccC
Q 038959           70 SLDFFIFGR   78 (86)
Q Consensus        70 ~l~~~l~~~   78 (86)
                      +|.+++...
T Consensus       125 sL~~~l~~~  133 (496)
T PTZ00283        125 DLRQEIKSR  133 (496)
T ss_pred             cHHHHHHHh
Confidence            999988653

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.97  E-value=2.1e-08  Score=53.21  Aligned_cols=79  Identities=16%  Similarity=0.160  Sum_probs=62.3

Q ss_pred             CCceEEEEc----CCCCEEEEEEecCCC----cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL----PDGQVIAVKRLSGRT----SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~----~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+..    .++..+++|.+....    ....+.+..|+..+..+ +|++++.+.+.+......++++|++++++|
T Consensus        13 ~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   92 (290)
T cd05613          13 YGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGEL   92 (290)
T ss_pred             cceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcH
Confidence            577888763    357889999986422    22334577788888888 689999999998888889999999999999


Q ss_pred             hhhhccCC
Q 038959           72 DFFIFGRS   79 (86)
Q Consensus        72 ~~~l~~~~   79 (86)
                      .+++....
T Consensus        93 ~~~l~~~~  100 (290)
T cd05613          93 FTHLSQRE  100 (290)
T ss_pred             HHHHHHcC
Confidence            99887543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.96  E-value=1.2e-08  Score=56.00  Aligned_cols=77  Identities=18%  Similarity=0.163  Sum_probs=60.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCC-----ceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP-----ERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~l~~e~~~~g~l~   72 (86)
                      ||.||++.. .++..+|+|.+...  .......+.+|+.++..++|+|++++.+.+...+     ..++++|++. ++|.
T Consensus        13 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~   91 (372)
T cd07853          13 FGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLH   91 (372)
T ss_pred             CEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHH
Confidence            688999984 47889999998642  1223346788999999999999999999887665     7899999986 5787


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      ..+.+.
T Consensus        92 ~~~~~~   97 (372)
T cd07853          92 KIIVSP   97 (372)
T ss_pred             HHHhcC
Confidence            777654

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.96  E-value=8.3e-09  Score=60.03  Aligned_cols=79  Identities=22%  Similarity=0.263  Sum_probs=65.5

Q ss_pred             CCceEEEEcC----C----CCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKLP----D----GQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~~----~----~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      ||.|++|...    .    ...||||.++... ......+..|+..++.+ .|+|++.+.+.|...++++++.|++..|+
T Consensus       309 fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~  388 (609)
T KOG0200|consen  309 FGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGD  388 (609)
T ss_pred             ccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCc
Confidence            7889888731    1    3478999997543 33456789999999987 69999999999988999999999999999


Q ss_pred             hhhhhccCC
Q 038959           71 LDFFIFGRS   79 (86)
Q Consensus        71 l~~~l~~~~   79 (86)
                      |..+++..+
T Consensus       389 L~~~Lr~~r  397 (609)
T KOG0200|consen  389 LLEFLRKKR  397 (609)
T ss_pred             HHHHHHhcc
Confidence            999999776

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.96  E-value=2.3e-11  Score=63.35  Aligned_cols=76  Identities=24%  Similarity=0.249  Sum_probs=60.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      |+.|+++. ..+|+.+++|+++..  ...+.+.+.+|+.+.+.++||||+.++..+......++++|++.+++|..-|-
T Consensus        24 FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV  102 (355)
T KOG0033|consen   24 FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV  102 (355)
T ss_pred             hHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHH
Confidence            34455554 346777888887632  33456788999999999999999999999999999999999999999886543

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.96  E-value=1.2e-08  Score=54.96  Aligned_cols=78  Identities=19%  Similarity=0.256  Sum_probs=63.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCc-ccceeeeeeeCC------ceEEEEeccCCCC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTN-IVRLIGCSLHGP------ERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~------~~~l~~e~~~~g~   70 (86)
                      ||.||+|+ ..+|..||+|.++....  .......+|++.++.+.|+| ++.+.+.+...+      .+++++||+.. +
T Consensus        24 yg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-D  102 (323)
T KOG0594|consen   24 YGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-D  102 (323)
T ss_pred             ceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecc-c
Confidence            68899999 55789999999974322  23335689999999999999 999999998776      78899999955 8


Q ss_pred             hhhhhccCC
Q 038959           71 LDFFIFGRS   79 (86)
Q Consensus        71 l~~~l~~~~   79 (86)
                      |..++....
T Consensus       103 L~~ymd~~~  111 (323)
T KOG0594|consen  103 LKKYMDSLP  111 (323)
T ss_pred             HHHHHHhcc
Confidence            888887654

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.96  E-value=2.3e-08  Score=52.26  Aligned_cols=79  Identities=16%  Similarity=0.147  Sum_probs=58.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCccc---HHHHHHHHHHH-hcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQG---IVEFKNEAKVI-AKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~---~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. ..+..+++|.++......   ...+..+...+ ....|+|++++++.+...+..++++|++++++|..++
T Consensus         9 ~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   88 (260)
T cd05611           9 FGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLI   88 (260)
T ss_pred             CeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHH
Confidence            678999984 468899999986432111   12233444433 3458999999999998889999999999999999998


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus        89 ~~~~   92 (260)
T cd05611          89 KTLG   92 (260)
T ss_pred             HHcC
Confidence            7543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=98.96  E-value=2.6e-09  Score=61.23  Aligned_cols=76  Identities=25%  Similarity=0.394  Sum_probs=64.2

Q ss_pred             CCceEEEEcCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||+||+|++-  ..||||.+...  .....+.|.+|+..++.-.|-||+-+.|.|..++. .++...|++.+|+.+++..
T Consensus       405 FGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~  481 (678)
T KOG0193|consen  405 FGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQ  481 (678)
T ss_pred             ccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccch
Confidence            8999999973  35899999744  33455689999999999999999999999987777 9999999999999998854


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      +
T Consensus       482 e  482 (678)
T KOG0193|consen  482 E  482 (678)
T ss_pred             h
Confidence            3

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.95  E-value=3.4e-08  Score=51.83  Aligned_cols=78  Identities=21%  Similarity=0.263  Sum_probs=60.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC-----CcccHHHHHHHHHHHhcCCCCcccceeeeeeeC--CceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR-----TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--PERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. .++..+++|.+...     .......+.+|+..++.++|++++++.+.+...  ...++++|++++++|.
T Consensus        15 ~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~   94 (264)
T cd06653          15 FGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIK   94 (264)
T ss_pred             CeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHH
Confidence            578999984 46889999987422     112234677899999999999999999987553  4578999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++.+.
T Consensus        95 ~~~~~~  100 (264)
T cd06653          95 DQLKAY  100 (264)
T ss_pred             HHHHHc
Confidence            888653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.95  E-value=2.2e-08  Score=52.91  Aligned_cols=78  Identities=21%  Similarity=0.288  Sum_probs=62.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      +|.||++.. .++..+++|.+....  ......+..|+..++.+.|++++++.+.+...+..++++|+++ ++|.+++..
T Consensus        12 ~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~   90 (283)
T cd07835          12 YGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDS   90 (283)
T ss_pred             CeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhh
Confidence            578999984 468899999986432  2233467789999999999999999999998999999999995 588888865


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus        91 ~~   92 (283)
T cd07835          91 SP   92 (283)
T ss_pred             CC
Confidence            44

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.95  E-value=3.1e-08  Score=50.47  Aligned_cols=79  Identities=24%  Similarity=0.310  Sum_probs=65.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      +|.||++... ++..+++|........ ....+..|+..+..+.|++++++.+.+......++++|++++++|.+++...
T Consensus        12 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~   91 (225)
T smart00221       12 FGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKK   91 (225)
T ss_pred             CeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhc
Confidence            5778999854 4789999999755444 5567888999999999999999999988888899999999999999998764


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus        92 ~   92 (225)
T smart00221       92 G   92 (225)
T ss_pred             c
Confidence            3

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.95  E-value=2.2e-08  Score=52.97  Aligned_cols=78  Identities=26%  Similarity=0.362  Sum_probs=60.0

Q ss_pred             CCceEEEEc-----CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-----PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-----~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.+     ..+..+++|.++... ......+..|+..++.++|+|++++.+.+..  ....++++|++++++|.
T Consensus        17 ~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~   96 (283)
T cd05080          17 FGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLR   96 (283)
T ss_pred             CcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHH
Confidence            677876542     246789999987542 2344567889999999999999999987754  34578999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++...
T Consensus        97 ~~~~~~  102 (283)
T cd05080          97 DYLPKH  102 (283)
T ss_pred             HHHHHc
Confidence            988754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.95  E-value=2.4e-08  Score=55.42  Aligned_cols=72  Identities=13%  Similarity=0.082  Sum_probs=58.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.+. ..++..+|+|...      ...+.+|+.+++.++|+|++++.+.+......+++++++. ++|..++....
T Consensus       105 ~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~  177 (391)
T PHA03212        105 EGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKR  177 (391)
T ss_pred             CeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcC
Confidence            67899998 4578899999643      2346789999999999999999999988899999999885 68887776543

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.94  E-value=2e-08  Score=52.98  Aligned_cols=77  Identities=21%  Similarity=0.277  Sum_probs=62.0

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeC--CceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--PERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++... .+..+++|.+....  ......+..|+..++.+.|+|++++.+.+...  ...+++++++++ +|..++
T Consensus        12 ~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~   90 (287)
T cd07840          12 YGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLL   90 (287)
T ss_pred             CeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHH
Confidence            5789999854 58899999997542  23345677899999999999999999998877  789999999975 788877


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      .+.
T Consensus        91 ~~~   93 (287)
T cd07840          91 DSP   93 (287)
T ss_pred             hcc
Confidence            654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.94  E-value=8.2e-09  Score=53.66  Aligned_cols=77  Identities=26%  Similarity=0.296  Sum_probs=62.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.+|++. ..++..+++|.+....  ......+..|+..++.+.|+|++++.+.+......++++|++++++|..++.+
T Consensus        13 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   92 (256)
T cd08530          13 YGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISK   92 (256)
T ss_pred             ceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHH
Confidence            57788887 4467889999986432  23344677888999999999999999988888999999999999999998865

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.94  E-value=7.2e-09  Score=54.50  Aligned_cols=79  Identities=23%  Similarity=0.251  Sum_probs=63.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+++|.+....   ......+..+...+..+. |+|++++++.+......++++|++++++|.+++
T Consensus        14 ~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   93 (280)
T cd05581          14 FSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYI   93 (280)
T ss_pred             ceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHH
Confidence            578999984 468899999986422   122345677888888887 999999999998889999999999999999998


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      .+..
T Consensus        94 ~~~~   97 (280)
T cd05581          94 RKYG   97 (280)
T ss_pred             HHcC
Confidence            7653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.94  E-value=1.6e-10  Score=67.14  Aligned_cols=76  Identities=14%  Similarity=0.247  Sum_probs=64.4

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++..+ ++...|.|.+........++++-|+.++..++||+++++++.+...+.+.++.|||+||-....+.
T Consensus        45 FGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaiml  121 (1187)
T KOG0579|consen   45 FGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIML  121 (1187)
T ss_pred             chhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHH
Confidence            8999999844 566778898876555556788899999999999999999999999999999999999998776654

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.94  E-value=3.7e-08  Score=52.34  Aligned_cols=76  Identities=22%  Similarity=0.253  Sum_probs=58.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeC-----CceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHG-----PERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~-----~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++.. .++..+++|.+.... .....+..++..+..+ +|+|++++.+.+...     +..++++|++++++|.+
T Consensus        35 ~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~  113 (291)
T cd06639          35 YGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTE  113 (291)
T ss_pred             CeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHH
Confidence            578898884 468889999986432 2234566788888887 799999999987643     35889999999999998


Q ss_pred             hhcc
Q 038959           74 FIFG   77 (86)
Q Consensus        74 ~l~~   77 (86)
                      ++..
T Consensus       114 ~~~~  117 (291)
T cd06639         114 LVKG  117 (291)
T ss_pred             HHHH
Confidence            8753

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.92  E-value=3.8e-08  Score=52.70  Aligned_cols=75  Identities=20%  Similarity=0.275  Sum_probs=59.2

Q ss_pred             CCceEEEEc-C--CCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeC--CceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-P--DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--PERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~--~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++.. .  .+..+|+|.+....   ......+..|+.++..+.|+|++++.+.+...  ...++++|++++ ++.
T Consensus        13 ~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~   91 (316)
T cd07842          13 YGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLW   91 (316)
T ss_pred             cEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHH
Confidence            578999984 3  47899999997532   23345677888999999999999999998877  789999999975 676


Q ss_pred             hhhc
Q 038959           73 FFIF   76 (86)
Q Consensus        73 ~~l~   76 (86)
                      .++.
T Consensus        92 ~~~~   95 (316)
T cd07842          92 QIIK   95 (316)
T ss_pred             HHHH
Confidence            6664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.92  E-value=3.6e-08  Score=52.11  Aligned_cols=78  Identities=23%  Similarity=0.282  Sum_probs=59.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeee------CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLH------GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~------~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. ..+..+++|...... .....+..++..+..+ +|+|++++.+.+..      ....++++|++++|+|.
T Consensus        29 ~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~  107 (282)
T cd06636          29 YGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVT  107 (282)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHH
Confidence            678999984 468889999885432 2334567788888777 79999999988742      45689999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++...+
T Consensus       108 ~~~~~~~  114 (282)
T cd06636         108 DLVKNTK  114 (282)
T ss_pred             HHHHHcc
Confidence            9887543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.92  E-value=3.7e-08  Score=51.74  Aligned_cols=76  Identities=28%  Similarity=0.487  Sum_probs=57.6

Q ss_pred             CCceEEEEcCC-CC--EEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeee------CCceEEEEeccCCC
Q 038959            1 GSSLLQGKLPD-GQ--VIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH------GPERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~~~-~~--~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~l~~e~~~~g   69 (86)
                      ||.||.|.... +.  .+++|.++...  ......+..|...++.++|+|++++.+.+..      ....+++++|+++|
T Consensus        12 ~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~   91 (272)
T cd05075          12 FGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHG   91 (272)
T ss_pred             CceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCC
Confidence            68899998543 33  58899886432  2334567889999999999999999987642      23468899999999


Q ss_pred             Chhhhhc
Q 038959           70 SLDFFIF   76 (86)
Q Consensus        70 ~l~~~l~   76 (86)
                      +|..++.
T Consensus        92 ~l~~~~~   98 (272)
T cd05075          92 DLHSFLL   98 (272)
T ss_pred             cHHHHHH
Confidence            9998874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.92  E-value=2.1e-09  Score=54.06  Aligned_cols=73  Identities=21%  Similarity=0.270  Sum_probs=58.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||+|++++ +.+.+.||+|..+..  .......-++|+..++.+.|.|++.+++..+....+-+++|+|.. +|..+
T Consensus        15 ygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-dlkky   90 (292)
T KOG0662|consen   15 YGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY   90 (292)
T ss_pred             ceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-HHHHH
Confidence            68999999 567889999998643  223334678999999999999999999999999999999999853 44433

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.92  E-value=3.9e-08  Score=52.30  Aligned_cols=77  Identities=18%  Similarity=0.239  Sum_probs=60.0

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeC--CceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--PERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++... ++..+++|.++....  .....+..|+..+..+.|+|++++.+.+...  ...++++|++++ +|.+++
T Consensus        18 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~   96 (293)
T cd07843          18 YGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLM   96 (293)
T ss_pred             CeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHH
Confidence            6789999854 688899999864322  2223466788899999999999999988776  889999999974 888877


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus        97 ~~~   99 (293)
T cd07843          97 ETM   99 (293)
T ss_pred             Hhc
Confidence            653

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.91  E-value=6.4e-08  Score=52.08  Aligned_cols=76  Identities=21%  Similarity=0.245  Sum_probs=59.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||+++. .++..+++|.+.....   .....+..|+..++.++|+|++++.+.+......++++|++. |++..++.
T Consensus        34 ~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~  112 (313)
T cd06633          34 FGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLE  112 (313)
T ss_pred             CeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHH
Confidence            678999984 4688899999864322   223457788999999999999999999999999999999996 56766665


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus       113 ~  113 (313)
T cd06633         113 V  113 (313)
T ss_pred             h
Confidence            3

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.91  E-value=5.2e-08  Score=51.49  Aligned_cols=77  Identities=29%  Similarity=0.376  Sum_probs=59.3

Q ss_pred             CCceEEEEc-CCCC----EEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQ----VIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~----~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.+ .++.    .+|+|.+.... ......+..+...+..+.|+|++.+.+.+.. ....++++++++|+|.++
T Consensus        20 ~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~   98 (279)
T cd05109          20 FGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDY   98 (279)
T ss_pred             CceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHH
Confidence            688999984 3443    47899886433 2334567888888999999999999988764 456789999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus        99 l~~~  102 (279)
T cd05109          99 VREN  102 (279)
T ss_pred             Hhhc
Confidence            8754

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.91  E-value=5.7e-08  Score=51.44  Aligned_cols=77  Identities=25%  Similarity=0.366  Sum_probs=56.7

Q ss_pred             CCceEEEEc-CCCC----EEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQ----VIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~----~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.+ .++.    .+++|.+...... ....+..++..+..+.|+|++++.+.+. ....+++++++++|+|.++
T Consensus        20 ~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~   98 (279)
T cd05111          20 FGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDH   98 (279)
T ss_pred             CcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHH
Confidence            688999985 3444    4677777533221 2235667777888899999999999774 4557789999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus        99 l~~~  102 (279)
T cd05111          99 VRQH  102 (279)
T ss_pred             HHhc
Confidence            9754

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.91  E-value=5.4e-08  Score=51.07  Aligned_cols=76  Identities=22%  Similarity=0.290  Sum_probs=60.1

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCC------ceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGP------ERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~------~~~l~~e~~~~g~l~   72 (86)
                      ||.+|.+... .+..+++|.+.... .....+..|+.+++.+ .|+|++++.+.+....      ..++++|++++++|.
T Consensus        19 ~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~   97 (275)
T cd06608          19 YGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVT   97 (275)
T ss_pred             CeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHH
Confidence            5778998853 57789999886543 2335678899988887 7999999999886544      488999999999999


Q ss_pred             hhhcc
Q 038959           73 FFIFG   77 (86)
Q Consensus        73 ~~l~~   77 (86)
                      +++..
T Consensus        98 ~~~~~  102 (275)
T cd06608          98 DLVKG  102 (275)
T ss_pred             HHHHH
Confidence            88764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.91  E-value=5.2e-08  Score=51.18  Aligned_cols=77  Identities=17%  Similarity=0.244  Sum_probs=58.8

Q ss_pred             CCceEEEEcC--CCCEEEEEEecCCC----------cccHHHHHHHHHHHhc-CCCCcccceeeeeeeCCceEEEEeccC
Q 038959            1 GSSLLQGKLP--DGQVIAVKRLSGRT----------SQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMP   67 (86)
Q Consensus         1 fg~v~~~~~~--~~~~~~~k~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~l~~e~~~   67 (86)
                      ||.||.+...  .+..+++|.+....          ......+..|+..+.. +.|+|++++.+.+...+..++++|+++
T Consensus        13 ~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   92 (269)
T cd08528          13 FGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIE   92 (269)
T ss_pred             CceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCC
Confidence            6789999854  36788999875321          1122345667776664 789999999999999999999999999


Q ss_pred             CCChhhhhcc
Q 038959           68 NKSLDFFIFG   77 (86)
Q Consensus        68 ~g~l~~~l~~   77 (86)
                      +++|.+++..
T Consensus        93 ~~~l~~~l~~  102 (269)
T cd08528          93 GAPLGEHFNS  102 (269)
T ss_pred             CCcHHHHHHH
Confidence            9999887743

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.91  E-value=2e-08  Score=54.59  Aligned_cols=78  Identities=19%  Similarity=0.314  Sum_probs=59.7

Q ss_pred             CCceEEEEc-C-----CCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeee-CCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL-P-----DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLH-GPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~-~-----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+.. .     ++..+++|.++... ......+..|+..+..+ +|+|++++.+.+.. ....+++++|+++++|
T Consensus        20 fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L   99 (337)
T cd05054          20 FGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNL   99 (337)
T ss_pred             CceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCH
Confidence            788998852 1     34689999887432 22234677888988888 79999999988754 4678899999999999


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      .+++...
T Consensus       100 ~~~i~~~  106 (337)
T cd05054         100 SNYLRSK  106 (337)
T ss_pred             HHHHHhc
Confidence            9998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.90  E-value=2.3e-08  Score=56.35  Aligned_cols=74  Identities=22%  Similarity=0.323  Sum_probs=57.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC----------c----ccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEE
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT----------S----QGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVY   63 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~----------~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~   63 (86)
                      ||.|..+.. .++..+|+|++....          .    ...+...+|+.+++.++|+|+++++.++..  .+.+++++
T Consensus       110 yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVl  189 (576)
T KOG0585|consen  110 YGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVL  189 (576)
T ss_pred             cceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEE
Confidence            677888873 468899999995321          1    112467889999999999999999999865  46799999


Q ss_pred             eccCCCChhhh
Q 038959           64 EFMPNKSLDFF   74 (86)
Q Consensus        64 e~~~~g~l~~~   74 (86)
                      ||+..|.+...
T Consensus       190 ey~s~G~v~w~  200 (576)
T KOG0585|consen  190 EYCSKGEVKWC  200 (576)
T ss_pred             EeccCCccccC
Confidence            99998876543

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.90  E-value=1.3e-08  Score=53.81  Aligned_cols=76  Identities=20%  Similarity=0.246  Sum_probs=60.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .+|..+++|.++...  ......+..|+..++.++|+|++++.+.+......++++|+++ ++|.+++.+
T Consensus        13 ~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~   91 (284)
T cd07839          13 YGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDS   91 (284)
T ss_pred             CeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHh
Confidence            578999984 468899999986432  1222456788999999999999999999988899999999997 477777654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.89  E-value=7.6e-08  Score=51.69  Aligned_cols=75  Identities=20%  Similarity=0.303  Sum_probs=59.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.++. .++..+++|.+...   .......+..|+..++.++|++++++.+.+......++++|++. |++...+.
T Consensus        28 ~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~  106 (308)
T cd06634          28 FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLE  106 (308)
T ss_pred             CEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHH
Confidence            578999984 46788999988632   12223467788999999999999999999988889999999996 57776664

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.89  E-value=3.8e-08  Score=52.00  Aligned_cols=76  Identities=20%  Similarity=0.251  Sum_probs=57.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc-ccHHHHHHHHHH-HhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS-QGIVEFKNEAKV-IAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~-~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++.. .++..+|+|.++.... .....+..+... ++..+|+|++++.+.+...+..++++|+++ |+|.+++.+
T Consensus        14 ~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~   92 (283)
T cd06617          14 YGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKK   92 (283)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHH
Confidence            688999984 4689999999874322 223345556554 555789999999999988889999999996 577777654

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.89  E-value=5e-08  Score=51.70  Aligned_cols=78  Identities=13%  Similarity=0.109  Sum_probs=56.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc--c-HHHHHHHHH---HHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ--G-IVEFKNEAK---VIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~--~-~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.. .++..+++|.+......  . ......+..   .+....|++++.+.+.+...+..++++|++++|+|..
T Consensus         7 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   86 (279)
T cd05633           7 FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHY   86 (279)
T ss_pred             CeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHH
Confidence            688999984 46889999998643211  1 122233332   2333478999999998888889999999999999998


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus        87 ~i~~~   91 (279)
T cd05633          87 HLSQH   91 (279)
T ss_pred             HHHhc
Confidence            88654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.87  E-value=5.1e-08  Score=51.99  Aligned_cols=76  Identities=20%  Similarity=0.241  Sum_probs=57.8

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC----------ceEEEEeccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP----------ERILVYEFMP   67 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------~~~l~~e~~~   67 (86)
                      ||.||+|... ++..+++|.++...  ......+..|+..++.++|+|++++.+.+....          ..++++|+++
T Consensus        20 ~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~   99 (302)
T cd07864          20 YGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMD   99 (302)
T ss_pred             CEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccC
Confidence            6789999854 68899999986432  223346678889999999999999998876543          7889999997


Q ss_pred             CCChhhhhcc
Q 038959           68 NKSLDFFIFG   77 (86)
Q Consensus        68 ~g~l~~~l~~   77 (86)
                      + ++...+.+
T Consensus       100 ~-~l~~~l~~  108 (302)
T cd07864         100 H-DLMGLLES  108 (302)
T ss_pred             c-cHHHHHhc
Confidence            6 66666654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.87  E-value=2.3e-10  Score=60.67  Aligned_cols=78  Identities=22%  Similarity=0.316  Sum_probs=61.1

Q ss_pred             CceEEEEcCCCCEEEEEEecC--CCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            2 SSLLQGKLPDGQVIAVKRLSG--RTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         2 g~v~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      |..|+|+++.. .+.+|++..  .......+|..|...++...|||++.+.+.|..++.+.++..||+.|+|++.+....
T Consensus       204 gelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t  282 (448)
T KOG0195|consen  204 GELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQT  282 (448)
T ss_pred             cccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCc
Confidence            56778887543 345566542  233334578888889999999999999999999999999999999999999998654


Q ss_pred             C
Q 038959           80 F   80 (86)
Q Consensus        80 ~   80 (86)
                      .
T Consensus       283 ~  283 (448)
T KOG0195|consen  283 S  283 (448)
T ss_pred             c
Confidence            4

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.87  E-value=6.7e-08  Score=50.94  Aligned_cols=74  Identities=14%  Similarity=0.151  Sum_probs=54.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHh-cCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIA-KPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|..........     +..... ..+|+|++++.+.+...+..++++|++++++|.+++.+.
T Consensus        29 ~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~  103 (267)
T PHA03390         29 FGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE  103 (267)
T ss_pred             ceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhc
Confidence            688998884 4678899998864321111     111111 126999999999998889999999999999999998765


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus       104 ~  104 (267)
T PHA03390        104 G  104 (267)
T ss_pred             C
Confidence            3

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.87  E-value=2.5e-08  Score=51.70  Aligned_cols=73  Identities=19%  Similarity=0.074  Sum_probs=55.9

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+. ..++..+++|.+....     ....+...+....|+|++++++.+......++++|++++|+|.+++.+.
T Consensus         6 ~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   79 (237)
T cd05576           6 IDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF   79 (237)
T ss_pred             cceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence            57788888 4478899999986432     1223333344456899999999998889999999999999999988654

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.86  E-value=6.3e-08  Score=51.27  Aligned_cols=78  Identities=13%  Similarity=0.100  Sum_probs=56.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCccc---HHHHHHHH---HHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQG---IVEFKNEA---KVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~---~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.. .++..+|+|.+.......   ......+.   ..++...|++++.+.+.+...+..++++|++++|+|..
T Consensus         7 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~   86 (278)
T cd05606           7 FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY   86 (278)
T ss_pred             CeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHH
Confidence            688999884 468899999986432211   11122222   23444689999999999988889999999999999998


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus        87 ~l~~~   91 (278)
T cd05606          87 HLSQH   91 (278)
T ss_pred             HHHhc
Confidence            88654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.86  E-value=1.8e-09  Score=58.45  Aligned_cols=72  Identities=26%  Similarity=0.258  Sum_probs=54.6

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeC--C---ceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--P---ERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~---~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|. .+.+..+|+|..-+..    ..-.+|+.+|+.++|||++.+...+...  .   .+.+++||+|. +|...
T Consensus        37 Fg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~  111 (364)
T KOG0658|consen   37 FGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRV  111 (364)
T ss_pred             cceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHH
Confidence            89999999 4568899998764322    1234778889999999999998776532  2   35589999987 88888


Q ss_pred             hcc
Q 038959           75 IFG   77 (86)
Q Consensus        75 l~~   77 (86)
                      ++.
T Consensus       112 ~r~  114 (364)
T KOG0658|consen  112 IRH  114 (364)
T ss_pred             HHH
Confidence            873

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.85  E-value=3e-10  Score=69.41  Aligned_cols=80  Identities=23%  Similarity=0.311  Sum_probs=66.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcc--cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQ--GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+. ..+|...|+|++......  ....+..|..++-.+.|||++++++.-.+.+.++++||||.+|+|.+.+..
T Consensus      1248 fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~ 1327 (1509)
T KOG4645|consen 1248 FGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEH 1327 (1509)
T ss_pred             eeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHh
Confidence            78999998 668999999999743222  223466788889999999999999999999999999999999999998876


Q ss_pred             CCC
Q 038959           78 RSF   80 (86)
Q Consensus        78 ~~~   80 (86)
                      .+.
T Consensus      1328 gri 1330 (1509)
T KOG4645|consen 1328 GRI 1330 (1509)
T ss_pred             cch
Confidence            543

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.85  E-value=2.8e-09  Score=61.63  Aligned_cols=75  Identities=20%  Similarity=0.302  Sum_probs=61.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+. ..+...||+|.+......   ..++++.|+..++.+.|||++.+.+++.......++|||| -|+..+++.
T Consensus        39 FGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC-lGSAsDlle  117 (948)
T KOG0577|consen   39 FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC-LGSASDLLE  117 (948)
T ss_pred             cceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH-hccHHHHHH
Confidence            89999998 457889999998743322   2457889999999999999999999998888899999999 456666554

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.85  E-value=1.2e-07  Score=50.08  Aligned_cols=77  Identities=29%  Similarity=0.331  Sum_probs=57.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeC--CceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHG--PERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+++|.+.... .........|+..+..+ .|+|++++.+.+..+  +..++++|+++ +++.+.+
T Consensus        12 ~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l   90 (282)
T cd07831          12 FSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELI   90 (282)
T ss_pred             cceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHH
Confidence            678999984 468889999886432 22223445677778877 599999999998876  88999999997 5777777


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      .+.
T Consensus        91 ~~~   93 (282)
T cd07831          91 KGR   93 (282)
T ss_pred             Hhc
Confidence            653

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.84  E-value=2.2e-08  Score=52.76  Aligned_cols=77  Identities=18%  Similarity=0.266  Sum_probs=62.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+... .+..+++|.+....  ....+.+..|+..++.+.|++++++.+.+...+..++++|+++ ++|.+++.+
T Consensus        12 ~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~   90 (282)
T cd07829          12 YGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDK   90 (282)
T ss_pred             cceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHh
Confidence            5789999854 58899999987542  2334567788899999999999999999988899999999997 589988876


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        91 ~   91 (282)
T cd07829          91 R   91 (282)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.84  E-value=1.3e-07  Score=51.33  Aligned_cols=77  Identities=19%  Similarity=0.212  Sum_probs=59.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeee-CCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH-GPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++. ..++..+++|.+...  .......+..|+.++..+.|+|++++.+.+.. ....++++|++ +++|..+++
T Consensus        23 ~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~  101 (328)
T cd07856          23 FGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLT  101 (328)
T ss_pred             CeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHh
Confidence            67889887 447889999987532  12234567789999999999999999998754 56788999998 558887776


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       102 ~~  103 (328)
T cd07856         102 SR  103 (328)
T ss_pred             cC
Confidence            54

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.83  E-value=8.2e-08  Score=57.32  Aligned_cols=78  Identities=22%  Similarity=0.328  Sum_probs=61.6

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeee-----eCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSL-----HGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-----~~~~~~l~~e~~~~g~l~~   73 (86)
                      +|.||+++ ..+++..|+|++.... ...++...|..+++.. +|+|+...++.+.     .++.+.||||||.+|+..+
T Consensus        32 ygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTD  110 (953)
T KOG0587|consen   32 YGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTD  110 (953)
T ss_pred             ceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHH
Confidence            46788888 5678889999987643 3334666777788775 7999999998764     3678999999999999999


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      +++.-.
T Consensus       111 LVKn~~  116 (953)
T KOG0587|consen  111 LVKNTK  116 (953)
T ss_pred             HHhhhc
Confidence            988543

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.83  E-value=6.4e-08  Score=51.35  Aligned_cols=78  Identities=15%  Similarity=0.176  Sum_probs=61.0

Q ss_pred             CCceEEEEc----CCCCEEEEEEecCCC----cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL----PDGQVIAVKRLSGRT----SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~----~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+..    ..+..+++|.++...    ......+..|+..+..+ +|++++++.+.+......++++|++++|+|
T Consensus        13 ~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   92 (288)
T cd05583          13 YGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGEL   92 (288)
T ss_pred             CceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcH
Confidence            577888763    246789999986321    12234577888888888 699999999998888899999999999999


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      ..++...
T Consensus        93 ~~~~~~~   99 (288)
T cd05583          93 FTHLYQR   99 (288)
T ss_pred             HHHHhhc
Confidence            9888754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.82  E-value=3.4e-08  Score=52.14  Aligned_cols=78  Identities=23%  Similarity=0.278  Sum_probs=60.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||+|... .+..+++|.+..... .......+++..+..+. |+|++++.+.+...+..++++|++ +|++.+.+..
T Consensus        12 ~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~   90 (283)
T cd07830          12 FGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKD   90 (283)
T ss_pred             ceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHh
Confidence            5789999954 578899998864322 22224456888888888 999999999998899999999999 7788888765


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus        91 ~~   92 (283)
T cd07830          91 RK   92 (283)
T ss_pred             cc
Confidence            43

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.82  E-value=4.2e-09  Score=55.97  Aligned_cols=69  Identities=19%  Similarity=0.268  Sum_probs=55.5

Q ss_pred             CCCCEEEEEEecCCC----ccc----HHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959           10 PDGQVIAVKRLSGRT----SQG----IVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus        10 ~~~~~~~~k~~~~~~----~~~----~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      .++...++|.+....    ...    .+.-..|+.+++++ .||+|+++.+.+..+.+++++++.|+.|+|++++.+.
T Consensus        40 ~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~  117 (411)
T KOG0599|consen   40 ETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSK  117 (411)
T ss_pred             ccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhh
Confidence            467788999886321    111    23456788889885 8999999999999999999999999999999999865

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.82  E-value=1.2e-07  Score=50.83  Aligned_cols=77  Identities=31%  Similarity=0.501  Sum_probs=58.0

Q ss_pred             CCceEEEEc-CCCC----EEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQ----VIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~----~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.. .++.    .+++|.+..... .....+..++..++.+.|+|++++++.+..+ ...++++++++|+|.++
T Consensus        20 ~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~   98 (303)
T cd05110          20 FGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDY   98 (303)
T ss_pred             CccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHH
Confidence            688999974 3443    468888764322 2233677888899999999999999988654 46688999999999998


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus        99 ~~~~  102 (303)
T cd05110          99 VHEH  102 (303)
T ss_pred             HHhc
Confidence            8754

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.81  E-value=1.6e-07  Score=51.24  Aligned_cols=77  Identities=17%  Similarity=0.176  Sum_probs=58.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC------ceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP------ERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~l~~e~~~~g~l   71 (86)
                      ||.||.+. ..++..+++|.+....  ......+..|+..++.+.|+|++++.+.+....      ..+++++++ +++|
T Consensus        28 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l  106 (343)
T cd07880          28 YGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDL  106 (343)
T ss_pred             CeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCH
Confidence            57889888 4578899999985322  223346778999999999999999998876543      347899988 6688


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      ..++.+.
T Consensus       107 ~~~~~~~  113 (343)
T cd07880         107 GKLMKHE  113 (343)
T ss_pred             HHHHhcC
Confidence            8877654

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.81  E-value=2.2e-07  Score=46.61  Aligned_cols=78  Identities=23%  Similarity=0.278  Sum_probs=64.7

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      +|.+|++... .+..+++|........ ....+.+|+..++.+.|++++++.+........++++|++++++|.+++...
T Consensus         6 ~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~   85 (215)
T cd00180           6 FGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKEN   85 (215)
T ss_pred             ceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhc
Confidence            5778999854 4889999998754322 3457889999999999999999999998888999999999989999998754

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.80  E-value=1.2e-07  Score=50.37  Aligned_cols=77  Identities=17%  Similarity=0.210  Sum_probs=58.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCc-----eEEEEeccCCCCh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPE-----RILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~-----~~l~~e~~~~g~l   71 (86)
                      ||.||++.. .++..+++|..+...  ......+.+|+.++..+ +|+|++++.+.+...+.     .++++|++++ ++
T Consensus        14 ~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l   92 (295)
T cd07837          14 YGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DL   92 (295)
T ss_pred             CeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CH
Confidence            688999984 468899999886432  12234677889999888 56999999988866554     8999999985 78


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      ..++...
T Consensus        93 ~~~~~~~   99 (295)
T cd07837          93 KKFMDSN   99 (295)
T ss_pred             HHHHHHh
Confidence            8877643

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.80  E-value=7.1e-08  Score=52.51  Aligned_cols=77  Identities=19%  Similarity=0.197  Sum_probs=59.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeC--------------CceEEEEec
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--------------PERILVYEF   65 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------------~~~~l~~e~   65 (86)
                      ||.||++.. .++..+++|.+..........+..|+..++.++|+|++++.+.+...              ...++++|+
T Consensus        18 ~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~   97 (342)
T cd07854          18 NGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEY   97 (342)
T ss_pred             CEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeec
Confidence            678999984 46889999998755444555688899999999999999988765432              357899999


Q ss_pred             cCCCChhhhhccC
Q 038959           66 MPNKSLDFFIFGR   78 (86)
Q Consensus        66 ~~~g~l~~~l~~~   78 (86)
                      ++ ++|..++.+.
T Consensus        98 ~~-~~L~~~~~~~  109 (342)
T cd07854          98 ME-TDLANVLEQG  109 (342)
T ss_pred             cc-ccHHHHHHcC
Confidence            97 5888777654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.80  E-value=2e-09  Score=65.33  Aligned_cols=79  Identities=18%  Similarity=0.120  Sum_probs=64.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.|...+ ..++..+|+|.+..+.   ......|..|-.+|.....+||+.++..+.+...+|++|+|++||+|..++.
T Consensus        88 FGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlS  167 (1317)
T KOG0612|consen   88 FGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLS  167 (1317)
T ss_pred             cceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHh
Confidence            78888888 4578889999987532   2334456666678888889999999999999999999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      +..
T Consensus       168 k~~  170 (1317)
T KOG0612|consen  168 KFD  170 (1317)
T ss_pred             hcC
Confidence            543

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.79  E-value=4e-08  Score=51.35  Aligned_cols=77  Identities=18%  Similarity=0.158  Sum_probs=56.8

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCC-----CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGR-----TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++... .+...++|.++..     ..........|...+..++|+|++++.+.+......++++|++++++|..+
T Consensus        13 ~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~   92 (260)
T cd08222          13 FGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCK   92 (260)
T ss_pred             CceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHH
Confidence            6788988743 3444555555421     122333456677888899999999999998888889999999999999988


Q ss_pred             hcc
Q 038959           75 IFG   77 (86)
Q Consensus        75 l~~   77 (86)
                      +..
T Consensus        93 ~~~   95 (260)
T cd08222          93 LEE   95 (260)
T ss_pred             HHH
Confidence            753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.79  E-value=1.2e-07  Score=53.78  Aligned_cols=71  Identities=18%  Similarity=0.204  Sum_probs=56.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++... .+..+++|....      ..+.+|+.+++.++|+|++++++.+...+..+++++++. ++|..++...
T Consensus       182 ~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~  253 (461)
T PHA03211        182 EGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGAR  253 (461)
T ss_pred             CeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhc
Confidence            6789999844 578899996421      235678999999999999999999988899999999885 6888877643

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.76  E-value=1e-07  Score=50.28  Aligned_cols=77  Identities=25%  Similarity=0.332  Sum_probs=61.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      +|.||++.. .++..+++|.++....  .....+..|+..++.+.|++++++++.+..+...++++|++++ ++..++..
T Consensus        12 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~   90 (283)
T cd05118          12 YGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKD   90 (283)
T ss_pred             CceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHh
Confidence            578899985 4688899999864332  2345677888899999999999999999888999999999975 77777765


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        91 ~   91 (283)
T cd05118          91 R   91 (283)
T ss_pred             h
Confidence            3

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.76  E-value=6.6e-08  Score=52.24  Aligned_cols=78  Identities=19%  Similarity=0.199  Sum_probs=61.3

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC-----ceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP-----ERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~l~~e~~~~g~l~   72 (86)
                      ||.||++... .+..+++|.+....  ......+..|+..++.++|+|++++.+.+....     .+++++++++ ++|.
T Consensus        13 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~   91 (330)
T cd07834          13 YGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLH   91 (330)
T ss_pred             CeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHH
Confidence            5789999854 58899999887532  334457888999999999999999998876654     7899999997 4788


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      .++.+..
T Consensus        92 ~~l~~~~   98 (330)
T cd07834          92 KVIKSPQ   98 (330)
T ss_pred             HHHhCCC
Confidence            8876543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.76  E-value=3e-07  Score=49.39  Aligned_cols=73  Identities=18%  Similarity=0.237  Sum_probs=55.8

Q ss_pred             CCceEEEEcC---CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeee--eCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP---DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSL--HGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++...   .+..+++|.+....  ....+.+|+.+++.+.|+|++++.+.+.  .....++++|++++ ++..++
T Consensus        14 ~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~   90 (317)
T cd07867          14 YGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHII   90 (317)
T ss_pred             CeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHH
Confidence            7899999843   35688999886432  2345678999999999999999998874  35678899999865 777766


Q ss_pred             c
Q 038959           76 F   76 (86)
Q Consensus        76 ~   76 (86)
                      .
T Consensus        91 ~   91 (317)
T cd07867          91 K   91 (317)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.75  E-value=2.5e-07  Score=49.77  Aligned_cols=73  Identities=18%  Similarity=0.236  Sum_probs=55.8

Q ss_pred             CCceEEEEcC---CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP---DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++...   .+..+++|.+....  ......+|+.+++.+.|+|++++.+.+..  ....+++++++. +++..++
T Consensus        14 ~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~   90 (317)
T cd07868          14 YGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHII   90 (317)
T ss_pred             CeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHH
Confidence            7889999843   46789999886432  23456789999999999999999987743  456789999885 4777776


Q ss_pred             c
Q 038959           76 F   76 (86)
Q Consensus        76 ~   76 (86)
                      .
T Consensus        91 ~   91 (317)
T cd07868          91 K   91 (317)
T ss_pred             H
Confidence            5

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.74  E-value=2.1e-07  Score=51.07  Aligned_cols=70  Identities=13%  Similarity=0.182  Sum_probs=55.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++... .+..+++|.....      ....|..+++.+.|+|++++++.+......+++++++. ++|..++..
T Consensus        79 ~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~  149 (357)
T PHA03209         79 EGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTK  149 (357)
T ss_pred             CeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHh
Confidence            6889999854 5778999975432      22457888899999999999999998899999999985 578877754

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.74  E-value=2.1e-07  Score=50.55  Aligned_cols=77  Identities=19%  Similarity=0.248  Sum_probs=58.5

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCC--CcccHHHHHHHHHHHhcC-CCCcccceeeeeee--CCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLH--GPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++... ++..+++|.+...  .......+..|+..+..+ +|+|++++.+.+..  ....++++|+++ ++|..+
T Consensus        20 ~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~   98 (337)
T cd07852          20 YGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAV   98 (337)
T ss_pred             CeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHH
Confidence            6789999854 6788999988532  222334567789999999 99999999998754  346899999997 588888


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus        99 ~~~~  102 (337)
T cd07852          99 IRAN  102 (337)
T ss_pred             HhcC
Confidence            7654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.73  E-value=1.3e-07  Score=51.29  Aligned_cols=78  Identities=15%  Similarity=0.178  Sum_probs=59.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeee----eCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSL----HGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++. ..++..+++|.+....  ......+..|+.++..+.|+|++++.+.+.    .....++++||+. ++|..
T Consensus        18 ~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~   96 (334)
T cd07855          18 YGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHH   96 (334)
T ss_pred             CeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHH
Confidence            57899998 4468899999986432  233456778899999999999999887664    2356889999995 58888


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++....
T Consensus        97 ~~~~~~  102 (334)
T cd07855          97 IIHSDQ  102 (334)
T ss_pred             HhccCC
Confidence            876543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.73  E-value=2.6e-07  Score=50.65  Aligned_cols=74  Identities=23%  Similarity=0.172  Sum_probs=55.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeC------CceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG------PERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+.. .++..+|+|.+...  .......+.+|+..++.+.|+|++++.+.+...      ...++++|++.+ ++
T Consensus        34 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l  112 (359)
T cd07876          34 QGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NL  112 (359)
T ss_pred             CEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CH
Confidence            688999984 46889999998632  223344677899999999999999999887543      247899999975 45


Q ss_pred             hhhh
Q 038959           72 DFFI   75 (86)
Q Consensus        72 ~~~l   75 (86)
                      ...+
T Consensus       113 ~~~~  116 (359)
T cd07876         113 CQVI  116 (359)
T ss_pred             HHHH
Confidence            5544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.73  E-value=3.7e-07  Score=48.81  Aligned_cols=77  Identities=19%  Similarity=0.254  Sum_probs=56.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC--------ceEEEEeccCCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP--------ERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------~~~l~~e~~~~g   69 (86)
                      ||.||++.. .++..+++|.+....  .........|+..++.+.|++++++.+.+...+        ..++++|++++ 
T Consensus        25 ~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-  103 (310)
T cd07865          25 FGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-  103 (310)
T ss_pred             CEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCc-
Confidence            578999984 468899999886332  122334567889999999999999999876543        34899999864 


Q ss_pred             ChhhhhccC
Q 038959           70 SLDFFIFGR   78 (86)
Q Consensus        70 ~l~~~l~~~   78 (86)
                      ++...+...
T Consensus       104 ~l~~~l~~~  112 (310)
T cd07865         104 DLAGLLSNK  112 (310)
T ss_pred             CHHHHHHhc
Confidence            777766543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.73  E-value=2.6e-07  Score=51.06  Aligned_cols=70  Identities=16%  Similarity=0.124  Sum_probs=51.2

Q ss_pred             CCceEEEEcC--CCCEEEEEEecCCC-----cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP--DGQVIAVKRLSGRT-----SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~--~~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++...  ++..+|+|.+....     ......+.+|+.++..+.|+|++.....   .+..++++||+++++|..
T Consensus        31 fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~LVmE~~~G~~L~~  107 (365)
T PRK09188         31 FSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGLVRGWTEGVPLHL  107 (365)
T ss_pred             cEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEEEEEccCCCCHHH
Confidence            7899999743  46677999875321     1123468899999999999998853322   245799999999998863

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.73  E-value=2e-07  Score=50.64  Aligned_cols=77  Identities=17%  Similarity=0.226  Sum_probs=58.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeC-----CceEEEEeccCCCChh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG-----PERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+. ..++..+++|.+...  .......+..|+.+++.++|+|++++.+.+...     ...++++|++. ++|.
T Consensus        18 ~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~   96 (337)
T cd07858          18 YGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLH   96 (337)
T ss_pred             CeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHH
Confidence            67899988 457889999998642  222334567888999999999999998876543     34789999996 6888


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++...
T Consensus        97 ~~~~~~  102 (337)
T cd07858          97 QIIRSS  102 (337)
T ss_pred             HHHhcC
Confidence            877654

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.73  E-value=3.6e-07  Score=49.04  Aligned_cols=76  Identities=17%  Similarity=0.233  Sum_probs=57.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc--cHHHHHHHHHHHhcCCCCcccceeeeeeeC--CceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ--GIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--PERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+++|.+......  ......+|+.+++.++|+|++++.+.+...  +..++++|++.+ +|.+++
T Consensus        20 ~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l   98 (309)
T cd07845          20 YGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLL   98 (309)
T ss_pred             CEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHH
Confidence            578999984 46889999998643221  223456789999999999999999887543  568999999964 777776


Q ss_pred             cc
Q 038959           76 FG   77 (86)
Q Consensus        76 ~~   77 (86)
                      ..
T Consensus        99 ~~  100 (309)
T cd07845          99 DN  100 (309)
T ss_pred             Hh
Confidence            54

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PRK10345 hypothetical protein; Provisional

Probab=98.71  E-value=2.9e-07  Score=47.36  Aligned_cols=77  Identities=21%  Similarity=0.172  Sum_probs=54.8

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-----CCCcccceeeeeeeCC---ceE-EEEec--cCCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-----QHTNIVRLIGCSLHGP---ERI-LVYEF--MPNK   69 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~---~~~-l~~e~--~~~g   69 (86)
                      ||.||. .-.++.. ++|.+..........+.+|+..++.+     .|+||+.+++.+....   .++ +++|+  +.+|
T Consensus        15 ~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~   92 (210)
T PRK10345         15 HRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSI   92 (210)
T ss_pred             ceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcch
Confidence            456775 2223444 68887654334456789999999988     5799999999998753   334 67898  5579


Q ss_pred             ChhhhhccCC
Q 038959           70 SLDFFIFGRS   79 (86)
Q Consensus        70 ~l~~~l~~~~   79 (86)
                      +|.+++.+.+
T Consensus        93 tL~~~l~~~~  102 (210)
T PRK10345         93 TLTEFAEQCR  102 (210)
T ss_pred             hHHHHHHccc
Confidence            9999997653

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.71  E-value=4.8e-07  Score=47.61  Aligned_cols=77  Identities=31%  Similarity=0.428  Sum_probs=57.5

Q ss_pred             CCceEEEEcC----CCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC------ceEEEEeccCC
Q 038959            1 GSSLLQGKLP----DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP------ERILVYEFMPN   68 (86)
Q Consensus         1 fg~v~~~~~~----~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~l~~e~~~~   68 (86)
                      ||.||++...    .+..+++|.+....  ......+.+|+..++.++|+|++++.+.+....      .++++++++++
T Consensus        12 ~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (273)
T cd05074          12 FGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKH   91 (273)
T ss_pred             CCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCC
Confidence            6889988742    35789999886432  223346788999999999999999998765421      34688899999


Q ss_pred             CChhhhhcc
Q 038959           69 KSLDFFIFG   77 (86)
Q Consensus        69 g~l~~~l~~   77 (86)
                      |+|..++..
T Consensus        92 ~~l~~~~~~  100 (273)
T cd05074          92 GDLHTFLLM  100 (273)
T ss_pred             CcHHHHHHH
Confidence            999887653

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.70  E-value=8.9e-07  Score=47.06  Aligned_cols=77  Identities=21%  Similarity=0.300  Sum_probs=53.9

Q ss_pred             CCceEEEEc-C-CCCEEEEEEecCCC--cccHHHHHHHHHHHhc---CCCCcccceeeeee-----eCCceEEEEeccCC
Q 038959            1 GSSLLQGKL-P-DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAK---PQHTNIVRLIGCSL-----HGPERILVYEFMPN   68 (86)
Q Consensus         1 fg~v~~~~~-~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~-----~~~~~~l~~e~~~~   68 (86)
                      ||.||++.. . .+..+|+|.++...  ........+|+..++.   +.|+|++++.+.+.     ....+++++|+++ 
T Consensus        14 ~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-   92 (290)
T cd07862          14 YGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-   92 (290)
T ss_pred             CeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-
Confidence            688999984 3 46789999886432  1222345556655554   47999999998874     2456889999996 


Q ss_pred             CChhhhhccC
Q 038959           69 KSLDFFIFGR   78 (86)
Q Consensus        69 g~l~~~l~~~   78 (86)
                      ++|.+++...
T Consensus        93 ~~l~~~~~~~  102 (290)
T cd07862          93 QDLTTYLDKV  102 (290)
T ss_pred             CCHHHHHHhC
Confidence            5888887653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.70  E-value=2.2e-09  Score=62.31  Aligned_cols=74  Identities=19%  Similarity=0.262  Sum_probs=63.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+++ ...+...|+|.++.....+-.....|+-.++..+|+||+.+++.+.....+.+.|||+.+|+|.+.
T Consensus        28 ygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdi  102 (829)
T KOG0576|consen   28 YGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDI  102 (829)
T ss_pred             ccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccce
Confidence            57789888 446889999999866556666778888889999999999999999999999999999999988764

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.68  E-value=4e-07  Score=49.48  Aligned_cols=78  Identities=19%  Similarity=0.209  Sum_probs=58.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeC-----CceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG-----PERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+. ..++..+++|.+.... ......+..|+..++.+.|+|++++.+.+...     ...+++++++++ ++..
T Consensus        18 ~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~   96 (336)
T cd07849          18 YGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYK   96 (336)
T ss_pred             CeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhccc-CHHH
Confidence            57899998 4578899999986432 22334677899999999999999998876543     347899999864 7777


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      .+....
T Consensus        97 ~~~~~~  102 (336)
T cd07849          97 LIKTQH  102 (336)
T ss_pred             HHhcCC
Confidence            766543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.67  E-value=4.3e-07  Score=51.24  Aligned_cols=71  Identities=15%  Similarity=0.180  Sum_probs=52.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeee--------CCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--------GPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~l~~e~~~~g~l   71 (86)
                      ||.||++.. .++..+|+|.+....    ....+|+.+++.+.|+|++++.+.+..        ...+++++||+++ ++
T Consensus        79 fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l  153 (440)
T PTZ00036         79 FGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TV  153 (440)
T ss_pred             CEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cH
Confidence            788999984 468899999875321    234568889999999999998776532        1246789999975 66


Q ss_pred             hhhhc
Q 038959           72 DFFIF   76 (86)
Q Consensus        72 ~~~l~   76 (86)
                      ..++.
T Consensus       154 ~~~~~  158 (440)
T PTZ00036        154 HKYMK  158 (440)
T ss_pred             HHHHH
Confidence            66554

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.65  E-value=1.5e-07  Score=54.21  Aligned_cols=81  Identities=15%  Similarity=0.278  Sum_probs=62.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC------CCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ------HTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.|.++. ..+++.||+|+++... .....-..|+.++..+.      --|++...+.+...+++++++|.+.. +|++
T Consensus       199 FGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~-NLYe  276 (586)
T KOG0667|consen  199 FGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLST-NLYE  276 (586)
T ss_pred             cceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhh-hHHH
Confidence            78899998 5689999999998643 22233455666665543      34789999999999999999999855 8999


Q ss_pred             hhccCCCCCC
Q 038959           74 FIFGRSFSTF   83 (86)
Q Consensus        74 ~l~~~~~~~~   83 (86)
                      +++..++..+
T Consensus       277 llK~n~f~Gl  286 (586)
T KOG0667|consen  277 LLKNNKFRGL  286 (586)
T ss_pred             HHHhcCCCCC
Confidence            9998887654

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.65  E-value=3e-08  Score=57.98  Aligned_cols=76  Identities=14%  Similarity=0.207  Sum_probs=57.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.|.... .++...+|.|.++.....   .......|-.++...+..|+++++..+.+.+.++++|+|+++|++..++-
T Consensus       642 FGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLI  721 (1034)
T KOG0608|consen  642 FGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLI  721 (1034)
T ss_pred             cceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHH
Confidence            56666554 455667778877643221   12345567778888999999999999999999999999999999887664

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.64  E-value=9.9e-07  Score=48.30  Aligned_cols=75  Identities=23%  Similarity=0.205  Sum_probs=56.4

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeC------CceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG------PERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+. ..++..+++|.+...  .......+.+|+.++..+.|+|++++.+.+...      ...++++|++.+ +|
T Consensus        29 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l  107 (353)
T cd07850          29 QGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NL  107 (353)
T ss_pred             CEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCC-CH
Confidence            67889888 447889999998632  223344677899999999999999999876533      357899999964 77


Q ss_pred             hhhhc
Q 038959           72 DFFIF   76 (86)
Q Consensus        72 ~~~l~   76 (86)
                      ...+.
T Consensus       108 ~~~~~  112 (353)
T cd07850         108 CQVIQ  112 (353)
T ss_pred             HHHHh
Confidence            76654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.64  E-value=2.8e-07  Score=50.15  Aligned_cols=77  Identities=21%  Similarity=0.171  Sum_probs=56.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeC------CceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG------PERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~l~~e~~~~g~l   71 (86)
                      ||.||++. ..++..+|+|.+....  ......+.+|+.+++.+.|+|++++.+.+...      ...+++++++ +++|
T Consensus        28 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l  106 (343)
T cd07878          28 YGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADL  106 (343)
T ss_pred             CeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCH
Confidence            68899998 4568899999986432  12234567899999999999999998776432      3467888876 6788


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      ..++...
T Consensus       107 ~~~~~~~  113 (343)
T cd07878         107 NNIVKCQ  113 (343)
T ss_pred             HHHHhcC
Confidence            8777543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.62  E-value=4.1e-07  Score=50.54  Aligned_cols=71  Identities=14%  Similarity=0.125  Sum_probs=55.8

Q ss_pred             CCceEEEEcC---CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP---DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+...   .+..+++|.+....     ...+|+.+++.+.|+|++++++.+......+++++++. ++|..++..
T Consensus       105 ~g~Vy~~~~~~~~~~~~v~vK~~~~~~-----~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~  178 (392)
T PHA03207        105 EGEVFVCTKHGDEQRKKVIVKAVTGGK-----TPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDR  178 (392)
T ss_pred             CeEEEEEEEcCCccceeEEEEeccccc-----cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHh
Confidence            6789988632   35678888875321     34578899999999999999999988889999999885 578887743

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.61  E-value=1.2e-06  Score=46.55  Aligned_cols=72  Identities=21%  Similarity=0.288  Sum_probs=55.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+. ..++..+++|.+.... ......+..|+..+..+. |+|++++++.+..+...++++++++. ++..
T Consensus        17 ~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~   91 (288)
T cd06616          17 FGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDK   91 (288)
T ss_pred             ceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHH
Confidence            68899988 4468899999986432 223346788888888875 99999999998888888999999864 4443

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.61  E-value=6.1e-08  Score=54.78  Aligned_cols=80  Identities=19%  Similarity=0.182  Sum_probs=60.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCccc-------HHHHHHHHHHHhcCCCCcccceeeeee-eCCceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQG-------IVEFKNEAKVIAKPQHTNIVRLIGCSL-HGPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~l~~e~~~~g~l   71 (86)
                      |+.||++. +.....+|+|+-.....+.       ...--+|..+.+.++|+.|+++++.+. +....+-++||+++.+|
T Consensus       476 FSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDL  555 (775)
T KOG1151|consen  476 FSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDL  555 (775)
T ss_pred             HHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCch
Confidence            45677776 4456788999875332221       223456788889999999999999885 56678899999999999


Q ss_pred             hhhhccCCC
Q 038959           72 DFFIFGRSF   80 (86)
Q Consensus        72 ~~~l~~~~~   80 (86)
                      ..+++.++-
T Consensus       556 DFYLKQhkl  564 (775)
T KOG1151|consen  556 DFYLKQHKL  564 (775)
T ss_pred             hHHHHhhhh
Confidence            999987654

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.60  E-value=1.6e-06  Score=46.06  Aligned_cols=77  Identities=19%  Similarity=0.278  Sum_probs=53.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc--ccHHHHHHHHHHHhc---CCCCcccceeeeeee-----CCceEEEEeccCCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAK---PQHTNIVRLIGCSLH-----GPERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~-----~~~~~l~~e~~~~g   69 (86)
                      ||.||++.. .++..+++|.++....  ........|+..+..   +.|+|++++.+.+..     ....++++|++++ 
T Consensus        13 ~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-   91 (288)
T cd07863          13 YGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-   91 (288)
T ss_pred             CeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEccccc-
Confidence            688999984 4788999999864321  112234455555554   479999999987653     3457899999974 


Q ss_pred             ChhhhhccC
Q 038959           70 SLDFFIFGR   78 (86)
Q Consensus        70 ~l~~~l~~~   78 (86)
                      +|..++...
T Consensus        92 ~l~~~~~~~  100 (288)
T cd07863          92 DLRTYLDKV  100 (288)
T ss_pred             CHHHHHHhc
Confidence            788777643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.60  E-value=4.3e-07  Score=49.53  Aligned_cols=78  Identities=17%  Similarity=0.193  Sum_probs=58.4

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCc------eEEEEeccCCCCh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPE------RILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------~~l~~e~~~~g~l   71 (86)
                      ||.||.+... ++..+++|.+....  ......+.+|+.+++.+.|+|++++.+.+...+.      .+++++++ +++|
T Consensus        28 ~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L  106 (343)
T cd07851          28 YGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADL  106 (343)
T ss_pred             ceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCH
Confidence            5789999854 67889999886421  2233456788999999999999998887655443      88999988 5689


Q ss_pred             hhhhccCC
Q 038959           72 DFFIFGRS   79 (86)
Q Consensus        72 ~~~l~~~~   79 (86)
                      .+++...+
T Consensus       107 ~~~~~~~~  114 (343)
T cd07851         107 NNIVKCQK  114 (343)
T ss_pred             HHHHhcCC
Confidence            88877543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.59  E-value=5.8e-08  Score=55.96  Aligned_cols=82  Identities=11%  Similarity=0.167  Sum_probs=58.7

Q ss_pred             CCceEEEEcC-CCCEEEEEEec----CCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCc--eEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLS----GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPE--RILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~l~~e~~~~g~l~~   73 (86)
                      |.+||+|... +|..||=..++    ...+...+.|..|+..++.+.|+||++++.+......  +-++.|+++.|+|..
T Consensus        53 fKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~  132 (632)
T KOG0584|consen   53 FKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLRE  132 (632)
T ss_pred             ceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHH
Confidence            3457777643 35544422221    1123344678899999999999999999998876544  779999999999999


Q ss_pred             hhccCCCCC
Q 038959           74 FIFGRSFST   82 (86)
Q Consensus        74 ~l~~~~~~~   82 (86)
                      +.++.+..+
T Consensus       133 Y~kk~~~vn  141 (632)
T KOG0584|consen  133 YRKKHRRVN  141 (632)
T ss_pred             HHHHhccCC
Confidence            998776543

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.57  E-value=1.7e-06  Score=47.32  Aligned_cols=77  Identities=19%  Similarity=0.192  Sum_probs=56.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeC------CceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG------PERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+. ..++..+|+|.+....  ......+.+|+..+..++|+|++++.+.+...      ...+++++++ +++|
T Consensus        30 ~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L  108 (345)
T cd07877          30 YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL  108 (345)
T ss_pred             CeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCH
Confidence            67889887 4578899999986432  22234677899999999999999999877532      3356677665 7788


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      ..++...
T Consensus       109 ~~~~~~~  115 (345)
T cd07877         109 NNIVKCQ  115 (345)
T ss_pred             HHHHhcC
Confidence            8776644

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.56  E-value=2.5e-06  Score=45.17  Aligned_cols=77  Identities=19%  Similarity=0.247  Sum_probs=55.8

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcc--cHHHHHHHHHHHh---cCCCCcccceeeeeeeCCc-----eEEEEeccCCC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQ--GIVEFKNEAKVIA---KPQHTNIVRLIGCSLHGPE-----RILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~-----~~l~~e~~~~g   69 (86)
                      ||.||++... ++..+++|.+......  ....+..|+..+.   .+.|+|++++.+.+.....     .++++|++++ 
T Consensus        12 ~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-   90 (287)
T cd07838          12 YGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-   90 (287)
T ss_pred             ceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhccc-
Confidence            6789999965 5889999999743221  1234555665554   4469999999999877666     8899999974 


Q ss_pred             ChhhhhccC
Q 038959           70 SLDFFIFGR   78 (86)
Q Consensus        70 ~l~~~l~~~   78 (86)
                      +|.+++...
T Consensus        91 ~l~~~l~~~   99 (287)
T cd07838          91 DLATYLSKC   99 (287)
T ss_pred             CHHHHHHHc
Confidence            788877653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.56  E-value=1.5e-06  Score=47.73  Aligned_cols=75  Identities=19%  Similarity=0.119  Sum_probs=55.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeC------CceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG------PERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+.. ..+..+|+|.+....  ......+.+|+..++.+.|+|++.+.+.+...      ..+++++|++++ ++
T Consensus        37 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l  115 (364)
T cd07875          37 QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NL  115 (364)
T ss_pred             CeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-CH
Confidence            678998873 468889999986432  23345677889999999999999998876432      357899999965 56


Q ss_pred             hhhhc
Q 038959           72 DFFIF   76 (86)
Q Consensus        72 ~~~l~   76 (86)
                      ...+.
T Consensus       116 ~~~~~  120 (364)
T cd07875         116 CQVIQ  120 (364)
T ss_pred             HHHHH
Confidence            65553

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.51  E-value=1.2e-06  Score=47.92  Aligned_cols=75  Identities=20%  Similarity=0.135  Sum_probs=55.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeC------CceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG------PERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+.. ..+..+|+|.+....  ......+.+|+..++.+.|+|++++.+.+...      ...++++|++++ ++
T Consensus        30 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l  108 (355)
T cd07874          30 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NL  108 (355)
T ss_pred             CEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-cH
Confidence            678998874 468889999986432  22334677888999999999999999877543      347899999965 55


Q ss_pred             hhhhc
Q 038959           72 DFFIF   76 (86)
Q Consensus        72 ~~~l~   76 (86)
                      ...+.
T Consensus       109 ~~~~~  113 (355)
T cd07874         109 CQVIQ  113 (355)
T ss_pred             HHHHh
Confidence            55543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.51  E-value=2.7e-08  Score=53.44  Aligned_cols=74  Identities=20%  Similarity=0.147  Sum_probs=50.2

Q ss_pred             CceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHH-HhcCCCCcccceeeeeee----CCceEEEEeccCCCChhhhh
Q 038959            2 SSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKV-IAKPQHTNIVRLIGCSLH----GPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         2 g~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~----~~~~~l~~e~~~~g~l~~~l   75 (86)
                      |.|..+. ..++..+|+|.+...     ..-.+|+.. +..-.|+|++++++.+.+    -..+.++||+|+||+|++.|
T Consensus        76 GkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsri  150 (400)
T KOG0604|consen   76 GKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRI  150 (400)
T ss_pred             CceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHH
Confidence            4455554 335666777766432     233455553 334579999999988754    34577899999999999999


Q ss_pred             ccCCC
Q 038959           76 FGRSF   80 (86)
Q Consensus        76 ~~~~~   80 (86)
                      .++..
T Consensus       151 q~~g~  155 (400)
T KOG0604|consen  151 QDRGD  155 (400)
T ss_pred             HHccc
Confidence            86644

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.50  E-value=2.2e-06  Score=45.77  Aligned_cols=76  Identities=18%  Similarity=0.291  Sum_probs=55.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++... ++..+++|.++.... .....+..++..+... .|+|++++++.+......++++|++++ .+..++..
T Consensus        28 ~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~~~  106 (296)
T cd06618          28 CGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST-CLDKLLKR  106 (296)
T ss_pred             CeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCc-CHHHHHHH
Confidence            5789999855 488999999864322 2234556677656555 599999999999989999999999854 66655543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.49  E-value=2.3e-06  Score=43.72  Aligned_cols=76  Identities=13%  Similarity=0.179  Sum_probs=54.9

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCccc--------HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQG--------IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      +|.||.|.. .+..+++|.........        ...+.+|+..+..+.++++......+......++++|++++++|.
T Consensus         9 ~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~   87 (211)
T PRK14879          9 EAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLK   87 (211)
T ss_pred             eEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHH
Confidence            577898876 56678888765322111        124667888888888888776666666667788999999999999


Q ss_pred             hhhcc
Q 038959           73 FFIFG   77 (86)
Q Consensus        73 ~~l~~   77 (86)
                      +.+..
T Consensus        88 ~~~~~   92 (211)
T PRK14879         88 DLINS   92 (211)
T ss_pred             HHHHh
Confidence            88754

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.47  E-value=5.4e-07  Score=49.15  Aligned_cols=78  Identities=21%  Similarity=0.259  Sum_probs=60.7

Q ss_pred             CCceEEEE-cCCCCEEEEEEecC--CCcccHHHHHHHHHHHhcCCCCcccceeeeeee-----CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSG--RTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH-----GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~l~~e~~~~g~l~   72 (86)
                      ||.|..+. ..++..||+|.+..  ........-.+|+..++.++|+|++.+.+.+..     -..+++++|+| ..+|.
T Consensus        35 yGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~  113 (359)
T KOG0660|consen   35 YGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLH  113 (359)
T ss_pred             eeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH-hhHHH
Confidence            46677776 44789999998862  233445677899999999999999999987754     34689999999 55899


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      ..|+++.
T Consensus       114 ~iik~~~  120 (359)
T KOG0660|consen  114 QIIKSQQ  120 (359)
T ss_pred             HHHHcCc
Confidence            9998775

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.39  E-value=3.3e-06  Score=42.85  Aligned_cols=72  Identities=14%  Similarity=0.101  Sum_probs=45.2

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcc--c------------------------HHHHHHHHHHHhcCCCCcccceeeeee
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQ--G------------------------IVEFKNEAKVIAKPQHTNIVRLIGCSL   54 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~--~------------------------~~~~~~~~~~~~~~~~~~i~~~~~~~~   54 (86)
                      ||.||.+...+|..+|+|.++.....  .                        ......|...+..+.++++...... .
T Consensus        10 ~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~~~-~   88 (190)
T cd05147          10 EANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEPI-L   88 (190)
T ss_pred             ceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCcEE-E
Confidence            67899998768999999999743211  1                        0112347777777766655332222 1


Q ss_pred             eCCceEEEEeccCCCChhhh
Q 038959           55 HGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus        55 ~~~~~~l~~e~~~~g~l~~~   74 (86)
                      .. ..+++||+++++++...
T Consensus        89 ~~-~~~iVmE~i~g~~l~~~  107 (190)
T cd05147          89 LK-SHVLVMEFIGDDGWAAP  107 (190)
T ss_pred             ec-CCEEEEEEeCCCCCcch
Confidence            12 23799999998776544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.36  E-value=5.8e-06  Score=41.92  Aligned_cols=76  Identities=14%  Similarity=0.238  Sum_probs=52.0

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCccc--------HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQG--------IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.+ .+..+++|.........        ...+.+|...+..+.++++..........+..++++|++++++|.
T Consensus         7 ~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~   85 (199)
T TIGR03724         7 EAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLK   85 (199)
T ss_pred             eEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHH
Confidence            578999985 56778888864322111        134567888888887766554444445566678999999999998


Q ss_pred             hhhcc
Q 038959           73 FFIFG   77 (86)
Q Consensus        73 ~~l~~   77 (86)
                      +.+..
T Consensus        86 ~~~~~   90 (199)
T TIGR03724        86 DVIEE   90 (199)
T ss_pred             HHHhh
Confidence            87654

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.36  E-value=9.2e-06  Score=44.43  Aligned_cols=74  Identities=20%  Similarity=0.215  Sum_probs=53.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC------ceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP------ERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~l~~e~~~~g~l   71 (86)
                      ||.||++.. .++..+++|.+....  ......+..|+..+..+.|+|++++.+.+....      ..+++++++.. ++
T Consensus        28 ~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l  106 (342)
T cd07879          28 YGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DL  106 (342)
T ss_pred             CeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEeccccc-CH
Confidence            578999984 468899999886421  222345778999999999999999998875432      35789998854 55


Q ss_pred             hhhh
Q 038959           72 DFFI   75 (86)
Q Consensus        72 ~~~l   75 (86)
                      ....
T Consensus       107 ~~~~  110 (342)
T cd07879         107 QKIM  110 (342)
T ss_pred             HHHH
Confidence            5543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.35  E-value=1.8e-05  Score=43.09  Aligned_cols=78  Identities=18%  Similarity=0.120  Sum_probs=54.9

Q ss_pred             CCceEEEEcC-C--CCEEEEEEecCCC--cccHHHHHHHHHHHhcC-CCCcccceeeeeee----CCceEEEEeccCCCC
Q 038959            1 GSSLLQGKLP-D--GQVIAVKRLSGRT--SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLH----GPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~~-~--~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~----~~~~~l~~e~~~~g~   70 (86)
                      ||.||.+... .  +..+|+|.+....  ......+..|+..+..+ +|+|++++.+....    ....+++++++. ++
T Consensus        13 ~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~   91 (332)
T cd07857          13 YGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-AD   91 (332)
T ss_pred             CeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CC
Confidence            6789999843 4  7789999886421  12234577888888887 69999999886432    234677888775 58


Q ss_pred             hhhhhccCC
Q 038959           71 LDFFIFGRS   79 (86)
Q Consensus        71 l~~~l~~~~   79 (86)
                      |...+....
T Consensus        92 L~~~l~~~~  100 (332)
T cd07857          92 LHQIIRSGQ  100 (332)
T ss_pred             HHHHHhcCC
Confidence            888876543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.33  E-value=5.6e-07  Score=47.35  Aligned_cols=77  Identities=25%  Similarity=0.186  Sum_probs=60.4

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeC-----CceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG-----PERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~l~~e~~~~g~l~~~   74 (86)
                      |+.|+.+. ..++..+|+|.+.-....+.+..++|+...+.++|+|++++.+.....     ...+++++|...|+|.+.
T Consensus        34 fsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~  113 (302)
T KOG2345|consen   34 FSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDE  113 (302)
T ss_pred             ceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHH
Confidence            44566666 567888898888655556667788999999999999999998765433     348999999999999998


Q ss_pred             hcc
Q 038959           75 IFG   77 (86)
Q Consensus        75 l~~   77 (86)
                      +..
T Consensus       114 i~~  116 (302)
T KOG2345|consen  114 IER  116 (302)
T ss_pred             HHH
Confidence            864

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.32  E-value=5.8e-06  Score=44.30  Aligned_cols=76  Identities=20%  Similarity=0.287  Sum_probs=54.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc--cHHHHHHHHHHHhcCCCCcccceeeeeeeC--------CceEEEEeccCCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ--GIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--------PERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~l~~e~~~~g   69 (86)
                      ||.||.+.. .++..+++|.+......  ......+|+..++.++|+|++++.+.+...        ..++++++++.. 
T Consensus        21 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-   99 (311)
T cd07866          21 FGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-   99 (311)
T ss_pred             CEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCc-
Confidence            578999984 46888999988643222  223567888999999999999998876432        346899999865 


Q ss_pred             Chhhhhcc
Q 038959           70 SLDFFIFG   77 (86)
Q Consensus        70 ~l~~~l~~   77 (86)
                      ++...+..
T Consensus       100 ~l~~~~~~  107 (311)
T cd07866         100 DLSGLLEN  107 (311)
T ss_pred             CHHHHHhc
Confidence            56665543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.32  E-value=5.7e-06  Score=47.71  Aligned_cols=77  Identities=19%  Similarity=0.195  Sum_probs=46.9

Q ss_pred             CCceEEEEc-----------------CCCCEEEEEEecCCCcccHHHHH--------------HHHHHHhcCCCCcc---
Q 038959            1 GSSLLQGKL-----------------PDGQVIAVKRLSGRTSQGIVEFK--------------NEAKVIAKPQHTNI---   46 (86)
Q Consensus         1 fg~v~~~~~-----------------~~~~~~~~k~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~i---   46 (86)
                      ||.||+|..                 ..+..+|+|.+..........+.              .|...+..+.|.++   
T Consensus       158 FG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~l~~~  237 (507)
T PLN03224        158 FGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNPIAAA  237 (507)
T ss_pred             CeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhhcccchhh
Confidence            789999853                 12457999998643322222222              24444444544433   


Q ss_pred             --cceeeeee--------eCCceEEEEeccCCCChhhhhcc
Q 038959           47 --VRLIGCSL--------HGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus        47 --~~~~~~~~--------~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                        ..+.+.+.        ..+..++++||+++++|.+++..
T Consensus       238 ~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~  278 (507)
T PLN03224        238 SCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDG  278 (507)
T ss_pred             hhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhh
Confidence              34444432        23567899999999999998875

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.31  E-value=9.2e-06  Score=42.52  Aligned_cols=74  Identities=11%  Similarity=0.066  Sum_probs=52.3

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHH---------HHHHHHHHhcCCCCcccceeeeeee--------CCceEEEE
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVE---------FKNEAKVIAKPQHTNIVRLIGCSLH--------GPERILVY   63 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~l~~   63 (86)
                      ||.|+.... ++..+++|.+++........         +.+|+..+..+.|+++..+......        .+..+++|
T Consensus        44 f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvm  122 (232)
T PRK10359         44 DTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLI  122 (232)
T ss_pred             ceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEE
Confidence            567777544 46689999997543222221         5677778888899999888766432        24578999


Q ss_pred             eccCCCChhhhh
Q 038959           64 EFMPNKSLDFFI   75 (86)
Q Consensus        64 e~~~~g~l~~~l   75 (86)
                      |++++.+|.++.
T Consensus       123 Eyi~G~tL~~~~  134 (232)
T PRK10359        123 EYIEGVELNDMP  134 (232)
T ss_pred             EEECCccHHHhh
Confidence            999999887763

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.28  E-value=1.6e-05  Score=40.25  Aligned_cols=70  Identities=17%  Similarity=0.207  Sum_probs=45.8

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcc--c------------------------HHHHHHHHHHHhcCCCCcccceeeeee
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQ--G------------------------IVEFKNEAKVIAKPQHTNIVRLIGCSL   54 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~--~------------------------~~~~~~~~~~~~~~~~~~i~~~~~~~~   54 (86)
                      ||.||.+...+|..+|+|.++.....  .                        ...+..|...+..+.++++........
T Consensus        10 ~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~   89 (190)
T cd05145          10 EANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEPILL   89 (190)
T ss_pred             CcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEe
Confidence            68899998668999999999754211  0                        112345677777777777644333322


Q ss_pred             eCCceEEEEeccCCCChh
Q 038959           55 HGPERILVYEFMPNKSLD   72 (86)
Q Consensus        55 ~~~~~~l~~e~~~~g~l~   72 (86)
                      .  ..+++||+++++++.
T Consensus        90 ~--~~~lVmE~~~g~~~~  105 (190)
T cd05145          90 K--KNVLVMEFIGDDGSP  105 (190)
T ss_pred             c--CCEEEEEEecCCCch
Confidence            2  247999999887544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.23  E-value=3.6e-07  Score=51.39  Aligned_cols=82  Identities=20%  Similarity=0.230  Sum_probs=58.1

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc---ccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.|..+..+ +...+|+|+++....   .+.+--..|-.++.-. ..|.++++++.+...+.++++|||+.+|+|...|
T Consensus       362 FGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhi  441 (683)
T KOG0696|consen  362 FGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHI  441 (683)
T ss_pred             cceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHH
Confidence            6778877743 577899999974421   1222223344444443 5678999999999999999999999999999888


Q ss_pred             cc-CCCCC
Q 038959           76 FG-RSFST   82 (86)
Q Consensus        76 ~~-~~~~~   82 (86)
                      .+ +++++
T Consensus       442 QQ~GkFKE  449 (683)
T KOG0696|consen  442 QQVGKFKE  449 (683)
T ss_pred             HHhcccCC
Confidence            75 45554

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.21  E-value=5.2e-07  Score=51.02  Aligned_cols=79  Identities=20%  Similarity=0.209  Sum_probs=60.9

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccH---HHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGI---VEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.|+-+. ..+|..+|.|.++....+..   ..-++|-.++..+..+.++++...++..+.+++++..|+||+|..+|.
T Consensus       198 FGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiy  277 (591)
T KOG0986|consen  198 FGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIY  277 (591)
T ss_pred             ccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEee
Confidence            67777776 34677778777754332221   235667778888899999999999999999999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       278 n~g  280 (591)
T KOG0986|consen  278 NHG  280 (591)
T ss_pred             ccC
Confidence            653

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.16  E-value=4.4e-06  Score=46.84  Aligned_cols=79  Identities=14%  Similarity=0.180  Sum_probs=57.7

Q ss_pred             CCceEEEEcCCCC------EEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeee-eeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLPDGQ------VIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCS-LHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~~~~------~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.|.|..+.      .+-+|.++... .-....++.|...+-.+.|+|+.++.+.+ +....+++.+..+..|+|.
T Consensus       297 FGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK  376 (563)
T KOG1024|consen  297 FGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLK  376 (563)
T ss_pred             hhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHH
Confidence            8999999764332      23355554332 22233577787788888999999998876 5678899999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      .++...+
T Consensus       377 ~FL~~Cr  383 (563)
T KOG1024|consen  377 SFLQICR  383 (563)
T ss_pred             HHHHHhc
Confidence            9998433

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.14  E-value=7.8e-07  Score=48.38  Aligned_cols=79  Identities=14%  Similarity=0.184  Sum_probs=57.9

Q ss_pred             CCceEEEEc-CC----CCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeee-CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PD----GQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLH-GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~----~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++.. .+    ...+|+|.++....  .....--+|+..++.++|+|++++...+.. ...+.++++|.+. +|+
T Consensus        37 YG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~  115 (438)
T KOG0666|consen   37 YGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLW  115 (438)
T ss_pred             cceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhh-hHH
Confidence            678998852 22    22578887764321  234456788999999999999999877654 7789999999977 888


Q ss_pred             hhhccCCC
Q 038959           73 FFIFGRSF   80 (86)
Q Consensus        73 ~~l~~~~~   80 (86)
                      ..|+-++.
T Consensus       116 ~II~fHr~  123 (438)
T KOG0666|consen  116 HIIKFHRA  123 (438)
T ss_pred             HHHHHhcc
Confidence            88875544

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.14  E-value=5.1e-05  Score=44.13  Aligned_cols=75  Identities=13%  Similarity=0.238  Sum_probs=51.1

Q ss_pred             CCceEEEEcCCCCEEEEEEe--cCCCc------ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLPDGQVIAVKRL--SGRTS------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~--~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++.+.... +++|..  +....      .....+.+|...+..+.|+++.............++++||+++++|.
T Consensus       346 ~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~  424 (535)
T PRK09605        346 EADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLK  424 (535)
T ss_pred             cEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHH
Confidence            5789998764333 232322  11111      11235778999999999999887766666666788999999999998


Q ss_pred             hhhc
Q 038959           73 FFIF   76 (86)
Q Consensus        73 ~~l~   76 (86)
                      +++.
T Consensus       425 ~~l~  428 (535)
T PRK09605        425 DVLE  428 (535)
T ss_pred             HHHH
Confidence            8764

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.12  E-value=1e-05  Score=46.56  Aligned_cols=48  Identities=15%  Similarity=0.281  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959           29 VEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus        29 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ..+.+|+.++..++|+|++++++.+...+..+++++++. +++..++..
T Consensus       208 ~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~  255 (501)
T PHA03210        208 IQLENEILALGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYD  255 (501)
T ss_pred             HHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhh
Confidence            357789999999999999999999999999999999874 467766654

>PTZ00284 protein kinase; Provisional

Probab=98.04  E-value=0.00011  Score=42.06  Aligned_cols=76  Identities=12%  Similarity=0.022  Sum_probs=48.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcC------CCCcccceeeeeee-CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP------QHTNIVRLIGCSLH-GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++.. ..+..+|+|.++... ........|+..+..+      ++.+++.+...+.. ....+++++++ +++|.
T Consensus       142 fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~  219 (467)
T PTZ00284        142 FGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLL  219 (467)
T ss_pred             CEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHH
Confidence            788999984 468889999986422 1222334444444433      44557777776654 35678888877 66788


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++...
T Consensus       220 ~~l~~~  225 (467)
T PTZ00284        220 DWIMKH  225 (467)
T ss_pred             HHHHHc
Confidence            777654

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.96  E-value=6.5e-06  Score=45.49  Aligned_cols=72  Identities=18%  Similarity=0.224  Sum_probs=51.5

Q ss_pred             CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCCCC
Q 038959           10 PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRSFS   81 (86)
Q Consensus        10 ~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~~~   81 (86)
                      ++.+.+|+|+++....   .+......|-.+.-.. .+|.++.+++++...+.++++.||.++|+|..++.+.+..
T Consensus       273 ~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrkl  348 (593)
T KOG0695|consen  273 KTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL  348 (593)
T ss_pred             ccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcC
Confidence            3566778888763211   1222334444444443 7899999999999999999999999999999988876654

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.90  E-value=7.9e-05  Score=42.94  Aligned_cols=79  Identities=16%  Similarity=0.199  Sum_probs=56.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC---C--C---Ccccceeeeeee----CCceEEEEeccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP---Q--H---TNIVRLIGCSLH----GPERILVYEFMP   67 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~---~--~---~~i~~~~~~~~~----~~~~~l~~e~~~   67 (86)
                      |++||.+- .+....||+|+.+.. ....+.-+.|+.+++.+   +  +   ..++++++.+..    +.++++|+|++ 
T Consensus        91 FSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-  168 (590)
T KOG1290|consen   91 FSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-  168 (590)
T ss_pred             cceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-
Confidence            78899886 456789999998753 24556677888887764   1  2   247788877743    56799999998 


Q ss_pred             CCChhhhhccCCCC
Q 038959           68 NKSLDFFIFGRSFS   81 (86)
Q Consensus        68 ~g~l~~~l~~~~~~   81 (86)
                      +.+|..+|......
T Consensus       169 GdnLLklI~~s~Yr  182 (590)
T KOG1290|consen  169 GDNLLKLIKYSNYR  182 (590)
T ss_pred             hhHHHHHHHHhCCC
Confidence            55777777755443

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=97.81  E-value=1.2e-05  Score=43.11  Aligned_cols=68  Identities=21%  Similarity=0.280  Sum_probs=53.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc-ccHHHHHHHHH-HHhcCCCCcccceeeeeeeCCceEEEEeccCC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS-QGIVEFKNEAK-VIAKPQHTNIVRLIGCSLHGPERILVYEFMPN   68 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~-~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~   68 (86)
                      ||+|++-. .+.|...|||.++.... +....++.|.. ++++-..|+|++++|.+...+-..+-||.|.-
T Consensus        77 fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~  147 (361)
T KOG1006|consen   77 FGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI  147 (361)
T ss_pred             chhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh
Confidence            67777776 45789999999986554 45557888877 45556899999999999988888888888853

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.79  E-value=3.7e-05  Score=46.46  Aligned_cols=71  Identities=21%  Similarity=0.276  Sum_probs=55.3

Q ss_pred             ceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            3 SLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         3 ~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      .||+|.+ .++.||||.+-.   ..-.-..+|+..++.- .|+|++..++.-....+.++..|.|.- +|.+++...
T Consensus       525 ~Vf~G~y-e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~  596 (903)
T KOG1027|consen  525 VVFRGVY-EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESS  596 (903)
T ss_pred             EEEEEee-CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHHHhcc
Confidence            3788877 466889987742   2223446888888876 699999999998889999999998854 899988874

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.78  E-value=2.4e-05  Score=48.96  Aligned_cols=54  Identities=22%  Similarity=0.329  Sum_probs=43.3

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeee
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSL   54 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   54 (86)
                      ||.|++++.+ +|..+|+|.+.... ...-....+|+..+.+++|||++.++....
T Consensus       492 FG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWV  547 (1351)
T KOG1035|consen  492 FGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWV  547 (1351)
T ss_pred             CceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhh
Confidence            8999999955 79999999997543 222335788999999999999999987653

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=97.77  E-value=7.9e-05  Score=43.88  Aligned_cols=80  Identities=15%  Similarity=0.064  Sum_probs=58.4

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc--------ccHHHHHHHHHHHhcCC---CCcccceeeeeeeCCceEEEEeccC-
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS--------QGIVEFKNEAKVIAKPQ---HTNIVRLIGCSLHGPERILVYEFMP-   67 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~--------~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~l~~e~~~-   67 (86)
                      ||.|+.+..+ ....|.+|.+.....        ........|+.+|..+.   |+||+++.+.++.++..++.+|--. 
T Consensus       574 yGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~  653 (772)
T KOG1152|consen  574 YGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGE  653 (772)
T ss_pred             cceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCC
Confidence            6888988855 355678888853221        11224567899998875   9999999999999999999998653 


Q ss_pred             CCChhhhhccCCC
Q 038959           68 NKSLDFFIFGRSF   80 (86)
Q Consensus        68 ~g~l~~~l~~~~~   80 (86)
                      +-+|+++|..++.
T Consensus       654 gIDLFd~IE~kp~  666 (772)
T KOG1152|consen  654 GIDLFDFIEFKPR  666 (772)
T ss_pred             CcchhhhhhccCc
Confidence            3458888875543

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=97.75  E-value=2.4e-05  Score=41.28  Aligned_cols=69  Identities=19%  Similarity=0.346  Sum_probs=51.5

Q ss_pred             CceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCcccceeeeeeeC--CceEEEEeccCCCChhh
Q 038959            2 SSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHG--PERILVYEFMPNKSLDF   73 (86)
Q Consensus         2 g~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~~   73 (86)
                      +.|+.|. ..+...+.+|.+++..   ...+.+|+.++..+. ++|++++.+....+  ..+.+++|++.+.+...
T Consensus        52 SEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~  124 (338)
T KOG0668|consen   52 SEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQ  124 (338)
T ss_pred             hhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHH
Confidence            4466676 4567788999997543   346789999999984 99999999987654  45788999987765443

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.73  E-value=0.00038  Score=35.49  Aligned_cols=71  Identities=15%  Similarity=0.126  Sum_probs=44.6

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcc----------------------cHHHHHHHHHHHhcCCCCc--ccceeeeeeeC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQ----------------------GIVEFKNEAKVIAKPQHTN--IVRLIGCSLHG   56 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~   56 (86)
                      ||.||++...++..+++|..+.....                      .......|...+..+.+.+  +....+    .
T Consensus        28 ~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~----~  103 (198)
T cd05144          28 ESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPID----W  103 (198)
T ss_pred             ceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceee----c
Confidence            57899998778899999987532210                      0112445666666665553  222222    2


Q ss_pred             CceEEEEeccCCCChhhhh
Q 038959           57 PERILVYEFMPNKSLDFFI   75 (86)
Q Consensus        57 ~~~~l~~e~~~~g~l~~~l   75 (86)
                      ...++++|+++++++....
T Consensus       104 ~~~~lv~e~~~g~~L~~~~  122 (198)
T cd05144         104 NRHAVVMEYIDGVELYRVR  122 (198)
T ss_pred             CCceEEEEEeCCcchhhcc
Confidence            4458999999998876653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.73  E-value=0.00032  Score=33.58  Aligned_cols=69  Identities=12%  Similarity=0.129  Sum_probs=48.4

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCC--CcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQH--TNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ++.||++.... ..+++|.......  ...+..|...+..+.+  ..++++.......+..++++|+++++.+.
T Consensus        11 ~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~   81 (155)
T cd05120          11 TNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD   81 (155)
T ss_pred             ccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence            35677777533 6788898764332  4467778877777754  46777776666667889999999887664

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.73  E-value=0.00027  Score=40.40  Aligned_cols=23  Identities=30%  Similarity=0.375  Sum_probs=20.2

Q ss_pred             CCceEEEEcCCCCEEEEEEecCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGR   23 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~   23 (86)
                      +|.||++++.+|..||+|++++.
T Consensus       130 igQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       130 IAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             hhheEEEEecCCCEEEEEeeCCC
Confidence            57899999888999999999764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>smart00090 RIO RIO-like kinase

Probab=97.57  E-value=0.0011  Score=34.95  Aligned_cols=73  Identities=16%  Similarity=0.082  Sum_probs=45.0

Q ss_pred             CCceEEEE--cCCCCEEEEEEecCCCcc--c----------------------HHHHHHHHHHHhcCCCCcccceeeeee
Q 038959            1 GSSLLQGK--LPDGQVIAVKRLSGRTSQ--G----------------------IVEFKNEAKVIAKPQHTNIVRLIGCSL   54 (86)
Q Consensus         1 fg~v~~~~--~~~~~~~~~k~~~~~~~~--~----------------------~~~~~~~~~~~~~~~~~~i~~~~~~~~   54 (86)
                      ||.||.+.  ..+|..+|+|.++.....  .                      ...+..|...+..+.+.+ +.....+.
T Consensus        41 ~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~-i~~p~~~~  119 (237)
T smart00090       41 EANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAG-VPVPKPIA  119 (237)
T ss_pred             ceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeE
Confidence            57899997  457999999998743210  0                      112456777777775422 22222222


Q ss_pred             eCCceEEEEeccCCCChhhhh
Q 038959           55 HGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus        55 ~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      . ...++++|+++++++....
T Consensus       120 ~-~~~~lV~E~~~g~~L~~~~  139 (237)
T smart00090      120 W-RRNVLVMEFIGGDGLPAPR  139 (237)
T ss_pred             e-cCceEEEEEecCCcccccc
Confidence            2 2347999999998876654

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=97.53  E-value=3.4e-06  Score=48.66  Aligned_cols=82  Identities=17%  Similarity=0.094  Sum_probs=61.0

Q ss_pred             CCceEEEEcCC-CCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLPD-GQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||+|-...... ...+|+|+++...   .+..+....|-.+|..++.++|++++-.+.+...+++++|-|-+|+++..++
T Consensus       433 FGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLr  512 (732)
T KOG0614|consen  433 FGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILR  512 (732)
T ss_pred             cceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhh
Confidence            56666555332 2246777776432   2334467788889999999999999999999999999999999999999998


Q ss_pred             cC-CCCC
Q 038959           77 GR-SFST   82 (86)
Q Consensus        77 ~~-~~~~   82 (86)
                      ++ .+.+
T Consensus       513 dRg~Fdd  519 (732)
T KOG0614|consen  513 DRGSFDD  519 (732)
T ss_pred             hcCCccc
Confidence            64 4443

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.49  E-value=0.00019  Score=40.38  Aligned_cols=75  Identities=16%  Similarity=0.260  Sum_probs=58.2

Q ss_pred             CCceEEEE-cC---CCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGK-LP---DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~-~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      |++||++. ..   ....+|+|.+....  ....+..|+..+..+ .+.|++++.+.+..++.+.+++|+.+.-+..++.
T Consensus        49 Fssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~  126 (418)
T KOG1167|consen   49 FSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLY  126 (418)
T ss_pred             hhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHH
Confidence            56677776 22   46789999987542  334578888888887 6889999999999999999999999987766665


Q ss_pred             cc
Q 038959           76 FG   77 (86)
Q Consensus        76 ~~   77 (86)
                      ++
T Consensus       127 ~~  128 (418)
T KOG1167|consen  127 RS  128 (418)
T ss_pred             hc
Confidence            54

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.45  E-value=0.00066  Score=39.98  Aligned_cols=78  Identities=18%  Similarity=0.243  Sum_probs=55.8

Q ss_pred             ceEEEEcCCCCEEEEEEec--CCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            3 SLLQGKLPDGQVIAVKRLS--GRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         3 ~v~~~~~~~~~~~~~k~~~--~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      .||+....+...+|+|...  .........+..|+..+..+ +|.+++.++++-...+.++++|| +..-+|..++++..
T Consensus       376 kV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE-~Gd~DL~kiL~k~~  454 (677)
T KOG0596|consen  376 KVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME-CGDIDLNKILKKKK  454 (677)
T ss_pred             eeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee-cccccHHHHHHhcc
Confidence            4666665444555555443  22334456789999999887 68999999999888999999999 44557888887664


Q ss_pred             CC
Q 038959           80 FS   81 (86)
Q Consensus        80 ~~   81 (86)
                      ..
T Consensus       455 ~~  456 (677)
T KOG0596|consen  455 SI  456 (677)
T ss_pred             CC
Confidence            43

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.44  E-value=0.00022  Score=41.77  Aligned_cols=23  Identities=26%  Similarity=0.310  Sum_probs=19.5

Q ss_pred             CCceEEEEcCC-CCEEEEEEecCC
Q 038959            1 GSSLLQGKLPD-GQVIAVKRLSGR   23 (86)
Q Consensus         1 fg~v~~~~~~~-~~~~~~k~~~~~   23 (86)
                      +|.||.+++.+ |..||+|++++.
T Consensus       132 iaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        132 IAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             ccEEEEEEECCCCCEEEEEEeCcc
Confidence            57899999765 999999999754

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.42  E-value=0.00012  Score=42.97  Aligned_cols=74  Identities=27%  Similarity=0.231  Sum_probs=53.2

Q ss_pred             CceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhc-CCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            2 SSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         2 g~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      +.+..+. ..++...++|.+....    .....++.++.. -+|+|++++.+.+..+-..++++|.+.++.+.+.+...+
T Consensus       336 s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~  411 (612)
T KOG0603|consen  336 SAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKP  411 (612)
T ss_pred             cceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcc
Confidence            4455555 3456677788775431    123345544443 489999999999999999999999999999988877543

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.41  E-value=0.00035  Score=37.92  Aligned_cols=75  Identities=16%  Similarity=0.126  Sum_probs=54.4

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeee-eeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGC-SLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~-~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.+..+. .++...+++|..... .....+|.+|.-.--.+ .|.||+..++. +...+...+++|++|.|+|.+-+.
T Consensus        37 FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~  114 (378)
T KOG1345|consen   37 FGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVE  114 (378)
T ss_pred             eeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcC
Confidence            56677776 345678888888642 23445788888766565 58889888765 456677789999999999987654

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.39  E-value=0.0014  Score=38.76  Aligned_cols=74  Identities=12%  Similarity=0.135  Sum_probs=42.3

Q ss_pred             CCceEEEEc-CC----CCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeee------eeeCCceEEEEeccCCC
Q 038959            1 GSSLLQGKL-PD----GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGC------SLHGPERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~-~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~l~~e~~~~g   69 (86)
                      ||.||++.. .+    +..+++|.+.....  .+....+  .+....+.++......      .......+++++|++++
T Consensus       145 FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~g  220 (566)
T PLN03225        145 FGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGES  220 (566)
T ss_pred             CeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCceEEEEEecCCC
Confidence            789999985 35    78899998753221  1111111  0111111111111110      23456788999999999


Q ss_pred             ChhhhhccC
Q 038959           70 SLDFFIFGR   78 (86)
Q Consensus        70 ~l~~~l~~~   78 (86)
                      +|.+++...
T Consensus       221 sL~~~l~~~  229 (566)
T PLN03225        221 TLADLMQSK  229 (566)
T ss_pred             cHHHHHHhc
Confidence            999988754

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.21  E-value=0.0084  Score=31.49  Aligned_cols=70  Identities=13%  Similarity=0.016  Sum_probs=45.1

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcc----cHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQ----GIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||+|+.... .+..+..+.+....-.    ....+.+|+.++..+. ++++..+.+.    +..+++++++.+.+|...+
T Consensus        15 f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~   89 (218)
T PRK12274         15 FGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRP   89 (218)
T ss_pred             cceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhh
Confidence            677774433 4556665555432211    1124678999999995 4667777654    3468999999988886543

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=97.14  E-value=0.0008  Score=37.80  Aligned_cols=80  Identities=14%  Similarity=0.047  Sum_probs=54.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC--CCc----ccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ--HTN----IVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~--~~~----i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.|-.+. ..++..+|+|+++... +..+.-..|+.++..+.  .|+    .+...+.+...++.++++|.+ +-++++
T Consensus       102 FGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~d  179 (415)
T KOG0671|consen  102 FGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFD  179 (415)
T ss_pred             ccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHH
Confidence            56777766 3457788999887532 45566677788887762  222    233334466788999999987 558899


Q ss_pred             hhccCCCCC
Q 038959           74 FIFGRSFST   82 (86)
Q Consensus        74 ~l~~~~~~~   82 (86)
                      +++......
T Consensus       180 Flk~N~y~~  188 (415)
T KOG0671|consen  180 FLKENNYIP  188 (415)
T ss_pred             HhccCCccc
Confidence            998765543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.10  E-value=0.0016  Score=40.76  Aligned_cols=75  Identities=17%  Similarity=0.200  Sum_probs=48.9

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC---CCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ---HTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||+||+|.-..+..+|+|.-.+...+.   |-.-..++.++.   -+.+..+......++-..++.+|.+.|+|.++++.
T Consensus       711 y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~  787 (974)
T KOG1166|consen  711 YGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLINT  787 (974)
T ss_pred             ceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhcc
Confidence            688999995569999999987654432   111111222222   12334444445556777899999999999999984


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus       788 ~  788 (974)
T KOG1166|consen  788 N  788 (974)
T ss_pred             C
Confidence            4

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.09  E-value=6e-06  Score=43.98  Aligned_cols=75  Identities=19%  Similarity=0.262  Sum_probs=50.4

Q ss_pred             CCceEEEE-cCCCCEEEEEEec--CCCcccHHHHHHHHHHHhcCCCCcccceeeeeee--------CCceEEEEeccCCC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLS--GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--------GPERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~l~~e~~~~g   69 (86)
                      ||.|++++ ..++..|++|..-  .........-++++.++..+.|.|++.++..|..        ...+++++.+++. 
T Consensus        30 fgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-  108 (376)
T KOG0669|consen   30 FGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-  108 (376)
T ss_pred             HHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-
Confidence            45566666 3356677766542  2233444566889999999999999999887753        2347889998865 


Q ss_pred             Chhhhhc
Q 038959           70 SLDFFIF   76 (86)
Q Consensus        70 ~l~~~l~   76 (86)
                      +|+-++.
T Consensus       109 DLaGlLs  115 (376)
T KOG0669|consen  109 DLAGLLS  115 (376)
T ss_pred             hHHHHhc
Confidence            5555544

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.08  E-value=0.00072  Score=36.85  Aligned_cols=66  Identities=18%  Similarity=0.280  Sum_probs=48.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcc-cHHHHHHHHHHHhc-CCCCcccceeeeeeeCCceEEEEecc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQ-GIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFM   66 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~l~~e~~   66 (86)
                      .|.|++.+ ..++..+|||.++....+ ....+++.+.++.. -+.|.|++.++.+.....+.+-||.|
T Consensus       105 cG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM  173 (391)
T KOG0983|consen  105 CGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM  173 (391)
T ss_pred             ccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence            47788888 456889999999754333 23356777776554 46899999999998888777777765

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.84  E-value=0.0069  Score=32.68  Aligned_cols=73  Identities=19%  Similarity=0.203  Sum_probs=48.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCC-CcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQH-TNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.+|.|. ...|..||+|.=...  .....+..|..+...+++ ..+..+.........-.++|+.+ +.+|.++..
T Consensus        28 FGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfn  102 (341)
T KOG1163|consen   28 FGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFN  102 (341)
T ss_pred             hhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHH
Confidence            78899998 668999999975432  222356677777776643 34444444444556667888877 557776654

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.83  E-value=0.0093  Score=30.62  Aligned_cols=74  Identities=9%  Similarity=0.062  Sum_probs=47.0

Q ss_pred             CceEEEEcCCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCC--CcccceeeeeeeC---CceEEEEeccCCCChhhhh
Q 038959            2 SSLLQGKLPDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQH--TNIVRLIGCSLHG---PERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         2 g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~---~~~~l~~e~~~~g~l~~~l   75 (86)
                      +.+|+.....|..+++|....... .....+..|..++..+.+  ..+.+++......   +..+++++++++.++...+
T Consensus        12 n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~   91 (223)
T cd05154          12 NLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRL   91 (223)
T ss_pred             ceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCC
Confidence            456776654557888998754321 123456778877777654  3345555555432   3568999999988776654

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05119 RIO RIO kinase family, catalytic domain

Probab=96.76  E-value=0.016  Score=29.19  Aligned_cols=22  Identities=23%  Similarity=0.205  Sum_probs=18.6

Q ss_pred             CCceEEEEcCCCCEEEEEEecC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSG   22 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~   22 (86)
                      ||.||.+...++..+++|.++.
T Consensus        10 ~g~Vy~a~~~~~~~vavKv~~~   31 (187)
T cd05119          10 EADVYLALDGDGEPVAVKIYRT   31 (187)
T ss_pred             ceeEEEEECCCCCEEEEEEEec
Confidence            6889999866788999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=96.59  E-value=0.0026  Score=37.59  Aligned_cols=74  Identities=19%  Similarity=0.185  Sum_probs=50.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCC------CcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQH------TNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      |++|-.+. ...|..||+|+++...... ..-+.|+.++..+..      .+.+.++..+...+++|+++|.+.- +|-+
T Consensus       445 Fs~Vvra~D~~r~~~vAiKIIRnNE~M~-KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Lsl-NLRe  522 (752)
T KOG0670|consen  445 FSTVVRARDQARGQEVAIKIIRNNEVMH-KTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSL-NLRE  522 (752)
T ss_pred             eeeeeeccccCCCCeeEEEEeecchHHh-hhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhc-hHHH
Confidence            56677776 3457899999998655433 234567777776522      2456666677788999999997743 5655


Q ss_pred             hhc
Q 038959           74 FIF   76 (86)
Q Consensus        74 ~l~   76 (86)
                      .++
T Consensus       523 vLK  525 (752)
T KOG0670|consen  523 VLK  525 (752)
T ss_pred             HHH
Confidence            555

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=96.39  E-value=0.014  Score=35.35  Aligned_cols=58  Identities=19%  Similarity=0.154  Sum_probs=45.1

Q ss_pred             CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccC
Q 038959           10 PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP   67 (86)
Q Consensus        10 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~   67 (86)
                      .++..+.+...+.......+...+.+..++.++||+|+++++.....+..+++.|.+.
T Consensus        35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~   92 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR   92 (690)
T ss_pred             ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc
Confidence            3577888888765443333445667778999999999999999999999999999763

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=96.23  E-value=0.015  Score=30.77  Aligned_cols=71  Identities=20%  Similarity=0.297  Sum_probs=51.0

Q ss_pred             CceEEEE-cCCCCEEEEEEecCCCc-ccHHHHHHHHHHHhc-CCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            2 SSLLQGK-LPDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         2 g~v~~~~-~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      |.|-+-+ ...|...|+|.+..... +....+++++.+..+ ...|.++.+++.+.....+.+.||.|.. +|..
T Consensus        60 G~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldk  133 (282)
T KOG0984|consen   60 GVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-SLDK  133 (282)
T ss_pred             chhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHH
Confidence            3344444 34688899999975433 334468888886665 5789999999999889999999998853 4443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=96.23  E-value=0.07  Score=28.45  Aligned_cols=76  Identities=21%  Similarity=0.267  Sum_probs=55.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCC-cccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHT-NIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      |+.||.+...  ..+++|.+......   ....+.++...+..+.|+ +++.+...+......+++++++.++++..++.
T Consensus        13 ~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   90 (384)
T COG0515          13 FGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLK   90 (384)
T ss_pred             CeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHH
Confidence            3556666543  56788888643222   355788888888888877 69999888866666899999999999997666


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        91 ~~   92 (384)
T COG0515          91 KI   92 (384)
T ss_pred             hc
Confidence            44

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=96.05  E-value=0.032  Score=33.36  Aligned_cols=71  Identities=25%  Similarity=0.315  Sum_probs=48.9

Q ss_pred             eEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeee----eCCceEEEEeccCC-CChhhh
Q 038959            4 LLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSL----HGPERILVYEFMPN-KSLDFF   74 (86)
Q Consensus         4 v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~l~~e~~~~-g~l~~~   74 (86)
                      .|++. ..+|..+++|.+.............-+..++.+.|+|++++.+.+.    ....+.++++|.|. ++|.++
T Consensus       292 tyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  292 TYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             eEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            45555 3368889999985443333333344466788899999999988765    35668899999875 556654

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.64  E-value=0.00046  Score=37.57  Aligned_cols=80  Identities=18%  Similarity=0.207  Sum_probs=53.1

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCC-----ceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP-----ERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~l~~e~~~~g~l~   72 (86)
                      ||.||..... +|+.++.|.+...  .......+.+|+..+...+|.|+++..+....+.     .++++.|.|. .+|+
T Consensus        66 FGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLH  144 (449)
T KOG0664|consen   66 FGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLH  144 (449)
T ss_pred             eeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhh
Confidence            6777776644 5788888877532  2233456788888888899999998887765432     3455666663 3677


Q ss_pred             hhhccCCCC
Q 038959           73 FFIFGRSFS   81 (86)
Q Consensus        73 ~~l~~~~~~   81 (86)
                      ..|-+....
T Consensus       145 KIIVSPQ~L  153 (449)
T KOG0664|consen  145 KIIVSPQAL  153 (449)
T ss_pred             heeccCCCC
Confidence            666655443

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=95.63  E-value=0.14  Score=28.42  Aligned_cols=76  Identities=13%  Similarity=0.048  Sum_probs=46.4

Q ss_pred             CCceEEEEcC-C-CCEEEEEEecCCCcccHHHHHHHHHHHhcCC----CCcccceeeee-eeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP-D-GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ----HTNIVRLIGCS-LHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~-~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~-~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+... . ...+|+|.-..........+..|..++..+.    ..++..+...- .....-+++|+.+ +.+|.+
T Consensus        31 fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~d  109 (322)
T KOG1164|consen   31 FGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLED  109 (322)
T ss_pred             CceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccHHH
Confidence            7899999843 3 2467888775432221114555666665553    24556666555 4566778888866 668888


Q ss_pred             hhcc
Q 038959           74 FIFG   77 (86)
Q Consensus        74 ~l~~   77 (86)
                      +...
T Consensus       110 l~~~  113 (322)
T KOG1164|consen  110 LRKR  113 (322)
T ss_pred             HHHh
Confidence            7643

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=95.45  E-value=0.026  Score=33.16  Aligned_cols=40  Identities=30%  Similarity=0.551  Sum_probs=36.1

Q ss_pred             hcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959           39 AKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus        39 ~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      +.+.|.|+.++.+.+..++...++.+++..|+|.+.+...
T Consensus         2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~   41 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE   41 (484)
T ss_pred             cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc
Confidence            4678999999999999999999999999999999998763

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.28  E-value=0.15  Score=25.17  Aligned_cols=68  Identities=16%  Similarity=0.144  Sum_probs=38.7

Q ss_pred             CceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcc-cceeeeeeeCCceEEEEeccCCCChhh
Q 038959            2 SSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNI-VRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         2 g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      +.+|.... .+..+++|....... .......|...+..+.+.++ ..+....  ....++++|++++.++..
T Consensus        12 ~~vy~~~~-~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~   80 (170)
T cd05151          12 NKNYRVEV-ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT   80 (170)
T ss_pred             CceEEEEE-CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence            45777664 367789998754321 11234556666665543333 2333332  233578999999877653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=94.91  E-value=0.092  Score=29.89  Aligned_cols=72  Identities=19%  Similarity=0.229  Sum_probs=45.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.++.|. +-.+..||+|.=.  ....+..+..|....+.+ ..++|...+.+=..+-.-.++++.+ +.+|.++.
T Consensus        41 FG~lf~G~Nl~nne~VAIKfEP--rkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLF  114 (449)
T KOG1165|consen   41 FGVLFLGKNLYNNEPVAIKFEP--RKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLF  114 (449)
T ss_pred             ceeeecccccccCceEEEEecc--ccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHH
Confidence            77888887 4468899999643  223344677777777776 4566666554333344456788876 55666654

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=94.90  E-value=0.25  Score=25.72  Aligned_cols=69  Identities=16%  Similarity=0.192  Sum_probs=42.7

Q ss_pred             CceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            2 SSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         2 g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      |.||.|.+ .+..+++|..+..  .....+..|..++..+...++.+-...+   +..++.|||+.+.+|...-.
T Consensus        36 s~Vyl~~~-~~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~y---g~~~i~me~i~G~~L~~~~~  104 (201)
T COG2112          36 SVVYLGEW-RGGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFY---GEDFIRMEYIDGRPLGKLEI  104 (201)
T ss_pred             cEEEEeec-cCceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEe---chhhhhhhhhcCcchhhhhh
Confidence            56788876 4557888887643  3345778888887776655544433222   22344589998877665433

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=94.70  E-value=0.32  Score=25.98  Aligned_cols=75  Identities=9%  Similarity=0.032  Sum_probs=43.6

Q ss_pred             ceEEEEcCCCCEEEEEEecCCC-------------cccHHHHHHHHHHHhcCCCCcc--cceeeeeee-CC---ceEEEE
Q 038959            3 SLLQGKLPDGQVIAVKRLSGRT-------------SQGIVEFKNEAKVIAKPQHTNI--VRLIGCSLH-GP---ERILVY   63 (86)
Q Consensus         3 ~v~~~~~~~~~~~~~k~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~-~~---~~~l~~   63 (86)
                      ++|.... .+..+++|......             ......+.+|...+..+.++++  +...+.... ..   ..++++
T Consensus        47 tv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~  125 (239)
T PRK01723         47 TTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILI  125 (239)
T ss_pred             cEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEE
Confidence            4454443 35567777664211             0122346778888888877664  444444322 22   235899


Q ss_pred             eccCC-CChhhhhccC
Q 038959           64 EFMPN-KSLDFFIFGR   78 (86)
Q Consensus        64 e~~~~-g~l~~~l~~~   78 (86)
                      |++++ .+|.+++...
T Consensus       126 e~l~G~~~L~~~l~~~  141 (239)
T PRK01723        126 ERIEGARDLVALLQEA  141 (239)
T ss_pred             EecCCCCCHHHHHhcC
Confidence            99987 6888877653

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.36  E-value=0.035  Score=26.35  Aligned_cols=23  Identities=26%  Similarity=0.315  Sum_probs=19.6

Q ss_pred             CCceEEEEcCCCCEEEEEEecCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGR   23 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~   23 (86)
                      .|.||++++.+|..|++|..++.
T Consensus        24 iaQVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   24 IAQVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             hhhheeeeecccchhhhhhcchH
Confidence            36799999888999999998764

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=93.51  E-value=0.19  Score=30.07  Aligned_cols=22  Identities=23%  Similarity=0.267  Sum_probs=19.9

Q ss_pred             CceEEEEcCCCCEEEEEEecCC
Q 038959            2 SSLLQGKLPDGQVIAVKRLSGR   23 (86)
Q Consensus         2 g~v~~~~~~~~~~~~~k~~~~~   23 (86)
                      |.||++++.+|+.||||++++.
T Consensus       139 aQVH~A~L~sG~~VAVKVqrPg  160 (517)
T COG0661         139 AQVHRAVLKSGEEVAVKVQRPG  160 (517)
T ss_pred             hhheeEEecCCCEEEEEecCCC
Confidence            6799999989999999999865

>PHA02882 putative serine/threonine kinase; Provisional

Probab=93.27  E-value=0.73  Score=25.06  Aligned_cols=74  Identities=14%  Similarity=0.087  Sum_probs=39.2

Q ss_pred             CCceEEEEcC-C---CCEEEEEEecCCCccc-HH----------HHHHHHHHHhcCCCCcccceeeeeeeCC----ceEE
Q 038959            1 GSSLLQGKLP-D---GQVIAVKRLSGRTSQG-IV----------EFKNEAKVIAKPQHTNIVRLIGCSLHGP----ERIL   61 (86)
Q Consensus         1 fg~v~~~~~~-~---~~~~~~k~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~l   61 (86)
                      ||.||++... +   +..+++|......... .+          ....+...+..+.|++++.+.+......    ..++
T Consensus        25 fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~  104 (294)
T PHA02882         25 FGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFI  104 (294)
T ss_pred             CceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecCCceEEEE
Confidence            7899999843 3   3455666543221111 01          1122233455678999999887654432    2355


Q ss_pred             EEeccCCCChhhhh
Q 038959           62 VYEFMPNKSLDFFI   75 (86)
Q Consensus        62 ~~e~~~~g~l~~~l   75 (86)
                      +++.+.. ++...+
T Consensus       105 ~~~~~~~-~~~~~~  117 (294)
T PHA02882        105 LLEKLVE-NTKEIF  117 (294)
T ss_pred             EEehhcc-CHHHHH
Confidence            6665533 444443

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=88.54  E-value=2.4  Score=22.47  Aligned_cols=66  Identities=11%  Similarity=0.038  Sum_probs=38.5

Q ss_pred             eEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            4 LLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         4 v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||+.... +..+.+|......   ......|...+..+. +..+.+++......+..+++++++++.++..
T Consensus        15 v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150          15 VYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             EEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            4544332 3567777765432   224556666666552 2334455555555556789999998877654

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=85.66  E-value=1.4  Score=26.75  Aligned_cols=22  Identities=23%  Similarity=0.344  Sum_probs=19.6

Q ss_pred             CceEEEEcCCCCEEEEEEecCC
Q 038959            2 SSLLQGKLPDGQVIAVKRLSGR   23 (86)
Q Consensus         2 g~v~~~~~~~~~~~~~k~~~~~   23 (86)
                      |.|++++++.|..||||+.++.
T Consensus       175 aQVhrA~L~~G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  175 AQVHRARLKNGEDVAVKVQHPG  196 (538)
T ss_pred             hheEEEEecCCCEEEEEecCcC
Confidence            6799999888999999999864

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=84.51  E-value=0.32  Score=27.55  Aligned_cols=64  Identities=28%  Similarity=0.332  Sum_probs=41.7

Q ss_pred             CCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeC------CceEEEEeccCCCChhhhhc
Q 038959           12 GQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG------PERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus        12 ~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~l~~e~~~~g~l~~~l~   76 (86)
                      +..+++|.+...  ....+..-.+|..++..+.|.|++++...+-+.      ..+++++|+|. .+|...+.
T Consensus        41 ~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~  112 (369)
T KOG0665|consen   41 GRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVIL  112 (369)
T ss_pred             cCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHH
Confidence            455665554321  122334456788888899999999999887543      24678888884 36666554

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=81.89  E-value=4.9  Score=21.33  Aligned_cols=48  Identities=17%  Similarity=0.251  Sum_probs=32.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959           31 FKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus        31 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ..+|..++..+....+....-....++.-.++||++++..|.+.+.+.
T Consensus        46 t~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~   93 (204)
T COG3642          46 TRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA   93 (204)
T ss_pred             HHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc
Confidence            456777777664444444444445667778999999998888777655

>PLN02876 acyl-CoA dehydrogenase

Probab=80.22  E-value=13  Score=24.04  Aligned_cols=58  Identities=10%  Similarity=0.191  Sum_probs=35.2

Q ss_pred             EEEEEEecCCC-cccHHHHHHHHHHHhcCC-CCcc--cceeeeeeeC---CceEEEEeccCCCCh
Q 038959           14 VIAVKRLSGRT-SQGIVEFKNEAKVIAKPQ-HTNI--VRLIGCSLHG---PERILVYEFMPNKSL   71 (86)
Q Consensus        14 ~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~-~~~i--~~~~~~~~~~---~~~~l~~e~~~~g~l   71 (86)
                      .+.+|...... ......+.+|..++..+. +.++  ..++..+...   +..+++||++++..+
T Consensus        67 ~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~  131 (822)
T PLN02876         67 RYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIF  131 (822)
T ss_pred             eEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCccc
Confidence            44555543222 123346778888888774 4443  5556665443   467899999987543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	86
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-09
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-08
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-06
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-06
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-06
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		8e-06
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		3e-05
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-05
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		8e-05
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		8e-05
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		9e-05
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		9e-05
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		9e-05
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-04
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-04
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		3e-04
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		3e-04
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		3e-04
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-04
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		3e-04
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		3e-04
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-04
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-04
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		3e-04
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		3e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		3e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		3e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		3e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		3e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		3e-04
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		3e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-04
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		3e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		3e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		3e-04
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		4e-04
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		4e-04
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-04
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		4e-04
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-04
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		5e-04
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		5e-04
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		5e-04
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		5e-04
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-04
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		5e-04
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-04
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		5e-04
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-04
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		5e-04
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		6e-04
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-04

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 6   QGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           +G+L DG ++AVKRL   RT  G ++F+ E ++I+   H N++RL G  +   ER+LVY 
Sbjct: 48  KGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 107
Query: 65  FMPNKSL 71
           +M N S+
Sbjct: 108 YMANGSV 114

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 6   QGKLPDGQVIAVKRLSGRTSQG-IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           +G+L DG ++AVKRL     QG  ++F+ E ++I+   H N++RL G  +   ER+LVY 
Sbjct: 56  KGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 115
Query: 65  FMPNKSL 71
           +M N S+
Sbjct: 116 YMANGSV 122

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 11  DGQVIAVKRLSG----RTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
           +   +AVK+L+      T +   +F  E KV+AK QH N+V L+G S  G +  LVY +M
Sbjct: 47  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 106
Query: 67  PNKSL 71
           PN SL
Sbjct: 107 PNGSL 111

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 11  DGQVIAVKRLSG----RTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
           +   +AVK+L+      T +   +F  E KV+AK QH N+V L+G S  G +  LVY +M
Sbjct: 53  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 67  PNKSL 71
           PN SL
Sbjct: 113 PNGSL 117

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 11  DGQVIAVKRLSG----RTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
           +   +AVK+L+      T +   +F  E KV+AK QH N+V L+G S  G +  LVY +M
Sbjct: 53  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 67  PNKSL 71
           PN SL
Sbjct: 113 PNGSL 117

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 11  DGQVIAVKRLSG----RTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
           +   +AVK+L+      T +   +F  E KV AK QH N+V L+G S  G +  LVY + 
Sbjct: 44  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYX 103
Query: 67  PNKSL 71
           PN SL
Sbjct: 104 PNGSL 108

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +G L DG  +A+KR +  +SQGI EF+ E + ++  +H ++V LIG      E IL+Y++
Sbjct: 57  KGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116
Query: 66  MPNKSLDFFIFGRSFSTF 83
           M N +L   ++G    T 
Sbjct: 117 MENGNLKRHLYGSDLPTM 134

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           +G L DG  +A+KR +  +SQGI EF+ E + ++  +H ++V LIG      E IL+Y++
Sbjct: 57  KGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116
Query: 66  MPNKSLDFFIFGRSFSTF 83
           M N +L   ++G    T 
Sbjct: 117 MENGNLKRHLYGSDLPTM 134

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 11  DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
           D  ++AVK L   +     +F+ EA+++   QH +IVR  G    G   ++V+E+M +  
Sbjct: 47  DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 106
Query: 71  LDFFI 75
           L+ F+
Sbjct: 107 LNRFL 111

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 11  DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
           D  ++AVK L   +     +F+ EA+++   QH +IVR  G    G   ++V+E+M +  
Sbjct: 41  DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 100
Query: 71  LDFFI 75
           L+ F+
Sbjct: 101 LNRFL 105

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 11  DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
           D  ++AVK L   +     +F+ EA+++   QH +IVR  G    G   ++V+E+M +  
Sbjct: 70  DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 129
Query: 71  LDFFI 75
           L+ F+
Sbjct: 130 LNRFL 134

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 15  IAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF 73
           +A+K L +G T +   +F +EA ++ +  H NI+RL G    G   ++V E+M N SLD 
Sbjct: 80  VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 74  FI 75
           F+
Sbjct: 140 FL 141

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 15  IAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF 73
           +A+K L +G T +   +F +EA ++ +  H NI+RL G    G   ++V E+M N SLD 
Sbjct: 80  VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 74  FI 75
           F+
Sbjct: 140 FL 141

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 11  DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
           D  ++AVK L   +     +F  EA+++   QH +IV+  G  + G   I+V+E+M +  
Sbjct: 42  DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 71  LDFFI 75
           L+ F+
Sbjct: 102 LNKFL 106

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ EF+P  
Sbjct: 42  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 70  SL 71
           SL
Sbjct: 102 SL 103

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 11  DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
           D  ++AVK L   T     +F+ EA+++   QH +IV+  G    G   I+V+E+M +  
Sbjct: 44  DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 71  LDFFI 75
           L+ F+
Sbjct: 104 LNKFL 108

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERI-LVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G C   G   + L+ E++P  
Sbjct: 39  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 70  SLDFFI 75
           SL  ++
Sbjct: 99  SLRDYL 104

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERI-LVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G C   G   + L+ E++P  
Sbjct: 46  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 70  SLDFFI 75
           SL  ++
Sbjct: 106 SLRDYL 111

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 15  IAVKRLSG-RTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF 73
           +A+K L G  T +   EF +EA ++ + +H NI+RL G   +    +++ EFM N +LD 
Sbjct: 45  VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 74  FI 75
           F+
Sbjct: 105 FL 106

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 15  IAVKRLSG-RTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF 73
           +A+K L G  T +   EF +EA ++ + +H NI+RL G   +    +++ EFM N +LD 
Sbjct: 47  VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 74  FI 75
           F+
Sbjct: 107 FL 108

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 8   KLPDGQVI--AVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  + I  A+K L  G T +   +F  EA ++ +  H NI+RL G        ++V E
Sbjct: 65  KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 124
Query: 65  FMPNKSLDFFI 75
           +M N SLD F+
Sbjct: 125 YMENGSLDSFL 135

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 8   KLPDGQVI--AVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  + I  A+K L  G T +   +F  EA ++ +  H NI+RL G        ++V E
Sbjct: 55  KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 114
Query: 65  FMPNKSLDFFI 75
           +M N SLD F+
Sbjct: 115 YMENGSLDSFL 125

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 8   KLPDGQVI--AVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  + I  A+K L  G T +   +F  EA ++ +  H NI+RL G        ++V E
Sbjct: 67  KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 65  FMPNKSLDFFI 75
           +M N SLD F+
Sbjct: 127 YMENGSLDSFL 137

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 8   KLPDGQVI--AVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  + I  A+K L  G T +   +F  EA ++ +  H NI+RL G        ++V E
Sbjct: 67  KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 65  FMPNKSLDFFI 75
           +M N SLD F+
Sbjct: 127 YMENGSLDSFL 137

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 8   KLPDGQVI--AVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  + I  A+K L  G T +   +F  EA ++ +  H NI+RL G        ++V E
Sbjct: 67  KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 65  FMPNKSLDFFI 75
           +M N SLD F+
Sbjct: 127 YMENGSLDSFL 137

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 8   KLPDGQVI--AVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  + I  A+K L  G T +   +F  EA ++ +  H NI+RL G        ++V E
Sbjct: 67  KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 65  FMPNKSLDFFI 75
           +M N SLD F+
Sbjct: 127 YMENGSLDSFL 137

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 8   KLPDGQVI--AVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  + I  A+K L  G T +   +F  EA ++ +  H NI+RL G        ++V E
Sbjct: 67  KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 65  FMPNKSLDFFI 75
           +M N SLD F+
Sbjct: 127 YMENGSLDSFL 137

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 8   KLPDGQVI--AVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  + I  A+K L  G T +   +F  EA ++ +  H NI+RL G        ++V E
Sbjct: 38  KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 97
Query: 65  FMPNKSLDFFI 75
           +M N SLD F+
Sbjct: 98  YMENGSLDSFL 108

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 8   KLPDGQVI--AVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  + I  A+K L  G T +   +F  EA ++ +  H NI+RL G        ++V E
Sbjct: 67  KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 65  FMPNKSLDFFI 75
           +M N SLD F+
Sbjct: 127 YMENGSLDSFL 137

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 42  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 70  SL 71
           SL
Sbjct: 102 SL 103

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 45  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 70  SL 71
           SL
Sbjct: 105 SL 106

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12 GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
          G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 70 SL 71
          SL
Sbjct: 98 SL 99

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 43  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 70  SL 71
           SL
Sbjct: 103 SL 104

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 39  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 70  SL 71
           SL
Sbjct: 99  SL 100

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 42  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 70  SL 71
           SL
Sbjct: 102 SL 103

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12 GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
          G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 70 SL 71
          SL
Sbjct: 97 SL 98

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 44  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 70  SL 71
           SL
Sbjct: 104 SL 105

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 39  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 70  SL 71
           SL
Sbjct: 99  SL 100

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 40  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 70  SL 71
           SL
Sbjct: 100 SL 101

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 73  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 133 GDLKSFL 139

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 57  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 70  SL 71
           SL
Sbjct: 117 SL 118

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 57  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 70  SL 71
           SL
Sbjct: 117 SL 118

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 70  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 70  SL 71
           SL
Sbjct: 130 SL 131

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 59  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 119 GDLKSFL 125

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 8   KLPDGQ--VIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  +   +A+K L SG T +   +F +EA ++ +  H N++ L G        +++ E
Sbjct: 55  KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITE 114
Query: 65  FMPNKSLDFFI 75
           FM N SLD F+
Sbjct: 115 FMENGSLDSFL 125

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 58  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 117
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 118 GDLKSFL 124

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 8  KLPDGQ--VIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
          KLP  +   +A+K L SG T +   +F +EA ++ +  H N++ L G        +++ E
Sbjct: 29 KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITE 88
Query: 65 FMPNKSLDFFI 75
          FM N SLD F+
Sbjct: 89 FMENGSLDSFL 99

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 73  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 132
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 133 GDLKSFL 139

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 58  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 117
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 118 GDLKSFL 124

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 8   KLPDGQ--VIAVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  +   +A+K L  G T +   +F  EA ++ +  H N+V L G    G   ++V E
Sbjct: 65  KLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIE 124
Query: 65  FMPNKSLDFFI 75
           FM N +LD F+
Sbjct: 125 FMENGALDAFL 135

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 50  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 109
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 110 GDLKSFL 116

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 75  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 134
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 135 GDLKSFL 141

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 59  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 119 GDLKSFL 125

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 59  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 119 GDLKSFL 125

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 65  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 124
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 125 GDLKSFL 131

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 76  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 135
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 136 GDLKSFL 142

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 85  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 144
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 145 GDLKSFL 151

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 99  PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 158
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 159 GDLKSFL 165

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 10  PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           P    +AVK L    S Q  ++F  EA +I+K  H NIVR IG SL    R ++ E M  
Sbjct: 73  PSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 69  KSLDFFI 75
             L  F+
Sbjct: 133 GDLKSFL 139

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 8   KLPDGQVI--AVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  + I  A+K L  G T +   +F  EA ++ +  H NI+RL G        ++V E
Sbjct: 67  KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 65  FMPNKSLDFFI 75
           +M N SLD F+
Sbjct: 127 YMENGSLDSFL 137

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	86
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-30
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	8e-29
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-27
3soc_A	322	Activin receptor type-2A; structural genomics cons	8e-17
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-15
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-12
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	9e-12
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-11
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-11
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-11
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-11
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-11
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-11
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-11
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	6e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	8e-11
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-10
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-10
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-10
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-10
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-10
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-10
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-10
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-10
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-10
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-10
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-10
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-10
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-10
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-10
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	7e-10
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-10
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	8e-10
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	8e-10
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	8e-10
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-09
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-09
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-09
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-09
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-09
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-09
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-09
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-09
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-09
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-09
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-09
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	6e-09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	7e-09
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-08
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-08
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-08
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-08
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-08
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-08
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-08
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-08
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-06
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-05
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	7e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-04
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-04
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	7e-04
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  107 bits (270), Expect = 2e-30
 Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 7   GKLPDGQVIAVKRLSGRTSQGI-VEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           G+L DG ++AVKRL    +QG  ++F+ E ++I+   H N++RL G  +   ER+LVY +
Sbjct: 49  GRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 108

Query: 66  MPNKSLDFFIFGRS 79
           M N S+   +  R 
Sbjct: 109 MANGSVASCLRERP 122

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  103 bits (259), Expect = 8e-29
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 7   GKLPDGQVIAVKRLSGRT----SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILV 62
           G + +   +AVK+L+        +   +F  E KV+AK QH N+V L+G S  G +  LV
Sbjct: 50  GYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLV 108

Query: 63  YEFMPNKSLDFFIFGRS 79
           Y +MPN SL   +    
Sbjct: 109 YVYMPNGSLLDRLSCLD 125

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 99.2 bits (248), Expect = 4e-27
 Identities = 28/76 (36%), Positives = 45/76 (59%)

Query: 7   GKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
           G L DG  +A+KR +  +SQGI EF+ E + ++  +H ++V LIG      E IL+Y++M
Sbjct: 58  GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117

Query: 67  PNKSLDFFIFGRSFST 82
            N +L   ++G    T
Sbjct: 118 ENGNLKRHLYGSDLPT 133

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 71.7 bits (176), Expect = 8e-17
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 5/76 (6%)

Query: 10  PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP----ERILVYEF 65
              + +AVK    +  Q   + + E   +   +H NI++ IG    G     +  L+  F
Sbjct: 45  LLNEYVAVKIFPIQDKQS-WQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103

Query: 66  MPNKSLDFFIFGRSFS 81
               SL  F+     S
Sbjct: 104 HEKGSLSDFLKANVVS 119

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 66.8 bits (163), Expect = 6e-15
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 11/83 (13%)

Query: 6   QGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKV--IAKPQHTNIVRLIGCSLHGP-----E 58
           +G L D + +AVK  S    Q    F NE  +  +   +H NI R I            E
Sbjct: 31  KGSL-DERPVAVKVFSFANRQ---NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86

Query: 59  RILVYEFMPNKSLDFFIFGRSFS 81
            +LV E+ PN SL  ++   +  
Sbjct: 87  YLLVMEYYPNGSLXKYLSLHTSD 109

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 58.1 bits (141), Expect = 7e-12
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 12  GQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK 69
           G  +AVK L  +   ++ + EF  E  ++ + +H NIV  +G     P   +V E++   
Sbjct: 60  GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119

Query: 70  SL 71
           SL
Sbjct: 120 SL 121

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 57.6 bits (140), Expect = 9e-12
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 12 GQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERIL--VYEFMP 67
          G  I VK L  R  +++   +F  E   +    H N++ ++G     P      +  +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92

Query: 68 NKSL 71
            SL
Sbjct: 93 YGSL 96

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 57.7 bits (140), Expect = 1e-11
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 12 GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
          G+V+ +K L     +    F  E KV+   +H N+++ IG          + E++   +L
Sbjct: 35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94

Query: 72 DFFI 75
             I
Sbjct: 95 RGII 98

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 57.3 bits (139), Expect = 1e-11
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 12  GQVIAVKRL----SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP 67
           G  +AVK          SQ I   + EAK+ A  +H NI+ L G  L  P   LV EF  
Sbjct: 30  GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89

Query: 68  NKSLDFFIFGRSFS 81
              L+  + G+   
Sbjct: 90  GGPLNRVLSGKRIP 103

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 56.9 bits (138), Expect = 2e-11
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 4   LLQGKLPDGQVI--AVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERIL 61
                LP+   +  AVK L   +     +F+ EA+++   QH +IVR  G    G   ++
Sbjct: 61  ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120

Query: 62  VYEFMPNKSLDFF 74
           V+E+M +  L+ F
Sbjct: 121 VFEYMRHGDLNRF 133

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 56.1 bits (136), Expect = 3e-11
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 4   LLQGKLPDGQVI--AVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERIL 61
                 P    +  AVK L   T     +F+ EA+++   QH +IV+  G    G   I+
Sbjct: 35  ECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 94

Query: 62  VYEFMPNKSLDFF 74
           V+E+M +  L+ F
Sbjct: 95  VFEYMKHGDLNKF 107

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 56.2 bits (136), Expect = 4e-11
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 4   LLQGKLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERI 60
            + G   D   +  AVK L    + Q  ++F  EA +I+K  H NIVR IG SL    R 
Sbjct: 50  QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109

Query: 61  LVYEFMPNKSLDFF 74
           ++ E M    L  F
Sbjct: 110 ILMELMAGGDLKSF 123

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 55.9 bits (135), Expect = 5e-11
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 4   LLQGKLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERI 60
            + G   D   +  AVK L    + Q  ++F  EA +I+K  H NIVR IG SL    R 
Sbjct: 91  QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150

Query: 61  LVYEFMPNKSLDFF 74
           ++ E M    L  F
Sbjct: 151 ILLELMAGGDLKSF 164

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 55.3 bits (134), Expect = 5e-11
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 4   LLQGKLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERI 60
            L G  P  Q    A+K L          EF++EA + A+ QH N+V L+G         
Sbjct: 29  HLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 88

Query: 61  LVYEFMPNKSLDFF 74
           +++ +  +  L  F
Sbjct: 89  MIFSYCSHGDLHEF 102

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 55.4 bits (134), Expect = 6e-11
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 5   LQGKLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERIL 61
             G LP       AVK L    ++    +F+ EA ++A+  + NIV+L+G    G    L
Sbjct: 68  APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL 127

Query: 62  VYEFMPNKSLDFF 74
           ++E+M    L+ F
Sbjct: 128 LFEYMAYGDLNEF 140

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 55.3 bits (134), Expect = 7e-11
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 8   KLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVYEF 65
           +  +  V AVK            +F  EA+++ +  H NIVRLIG C+   P  I V E 
Sbjct: 136 RADNTLV-AVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI-VMEL 193

Query: 66  MPNKSLDFF 74
           +       F
Sbjct: 194 VQGGDFLTF 202

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 55.0 bits (133), Expect = 8e-11
 Identities = 18/59 (30%), Positives = 27/59 (45%)

Query: 16  AVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF 74
            +K L          F   A +++K  H ++V   G  + G E ILV EF+   SLD +
Sbjct: 44  LLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 54.7 bits (132), Expect = 1e-10
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 8   KLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           KLP  + I  A+K L  G T +   +F  EA ++ +  H NI+RL G        ++V E
Sbjct: 67  KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126

Query: 65  FMPNKSLDFF 74
           +M N SLD F
Sbjct: 127 YMENGSLDSF 136

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 53.8 bits (130), Expect = 2e-10
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 16  AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
           AVK L    +   + +  +E  V+ +  H ++++L G        +L+ E+    SL
Sbjct: 57  AVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 53.8 bits (130), Expect = 2e-10
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 16  AVKRL-SGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF 73
           A+KR+    +     +F  E +V+ K   H NI+ L+G   H     L  E+ P+ +L  
Sbjct: 56  AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115

Query: 74  F 74
           F
Sbjct: 116 F 116

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 53.8 bits (130), Expect = 2e-10
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 5/71 (7%)

Query: 8   KLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVY 63
           ++P  + +  A+K L +G T +   +F +EA ++ +  H NI+RL G  +      I V 
Sbjct: 71  RVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI-VT 129

Query: 64  EFMPNKSLDFF 74
           E+M N SLD F
Sbjct: 130 EYMENGSLDTF 140

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 53.8 bits (130), Expect = 3e-10
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 4   LLQGKLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERI 60
           + +G + D      A+K +    + +  +EF NEA V+ +    ++VRL+G    G   +
Sbjct: 45  VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104

Query: 61  LVYEFMPNKSLDFF 74
           ++ E M    L  +
Sbjct: 105 VIMELMTRGDLKSY 118

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 53.8 bits (130), Expect = 3e-10
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 16  AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF 74
           A+K L    + +   E  +EA V+A   + ++ RL+G  L    ++ + + MP   L  +
Sbjct: 48  AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDY 106

Query: 75  I 75
           +
Sbjct: 107 V 107

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 53.5 bits (129), Expect = 3e-10
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 11  DGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERI-LVYEFMP 67
            G+ +AVK L        I + K E +++    H NIV+  G C+  G   I L+ EF+P
Sbjct: 49  TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108

Query: 68  NKSLDFFI 75
           + SL  ++
Sbjct: 109 SGSLKEYL 116

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 53.5 bits (129), Expect = 3e-10
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 11  DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPN 68
            G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P 
Sbjct: 69  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 128

Query: 69  KSLDFF 74
            SL  +
Sbjct: 129 GSLRDY 134

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 53.4 bits (129), Expect = 3e-10
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G+V+AVK+L   T + + +F+ E +++   QH NIV+  G       R   L+ E++P  
Sbjct: 39  GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98

Query: 70  SLDFF 74
           SL  +
Sbjct: 99  SLRDY 103

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 53.5 bits (129), Expect = 3e-10
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 16  AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVYEFMPNKSLDF 73
           A+K L +G T +  V+F  EA ++ +  H NI+RL G  S + P  I + E+M N +LD 
Sbjct: 77  AIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI-ITEYMENGALDK 135

Query: 74  F 74
           F
Sbjct: 136 F 136

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 53.1 bits (128), Expect = 4e-10
 Identities = 14/70 (20%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 4   LLQGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERIL 61
           + + K  +   +AVK L    T + + +  +E +++    +H NI+ L+G         +
Sbjct: 105 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164

Query: 62  VYEFMPNKSL 71
           + E+    +L
Sbjct: 165 IVEYASKGNL 174

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 53.1 bits (128), Expect = 4e-10
 Identities = 14/70 (20%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 4   LLQGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERIL 61
           + + K  +   +AVK L    T + + +  +E +++    +H NI+ L+G         +
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118

Query: 62  VYEFMPNKSL 71
           + E+    +L
Sbjct: 119 IVEYASKGNL 128

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 53.0 bits (128), Expect = 5e-10
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 4   LLQGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERIL 61
            L          AVK L        + +F  E  ++    H N++ L+G C       ++
Sbjct: 45  TLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104

Query: 62  VYEFMPNKSLDFFI 75
           V  +M +  L  FI
Sbjct: 105 VLPYMKHGDLRNFI 118

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 52.7 bits (127), Expect = 5e-10
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 12  GQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERI-LVYEFMPN 68
           G+++AVK L +    Q    +K E  ++    H +I++  G C   G   + LV E++P 
Sbjct: 60  GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119

Query: 69  KSLDFFIFGRSFS 81
            SL  ++   S  
Sbjct: 120 GSLRDYLPRHSIG 132

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 52.7 bits (127), Expect = 6e-10
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 2/74 (2%)

Query: 4   LLQGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERIL 61
               +  +    A+K L      Q +  F  E  ++    H N++ LIG          +
Sbjct: 41  EYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100

Query: 62  VYEFMPNKSLDFFI 75
           +  +M +  L  FI
Sbjct: 101 LLPYMCHGDLLQFI 114

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 52.5 bits (126), Expect = 7e-10
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 4   LLQGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERIL 61
            L          AVK L        + +F  E  ++    H N++ L+G C       ++
Sbjct: 109 TLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168

Query: 62  VYEFMPNKSLDFFI 75
           V  +M +  L  FI
Sbjct: 169 VLPYMKHGDLRNFI 182

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 52.3 bits (126), Expect = 8e-10
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVYEFMPNKS 70
           G  +AVK +    +     F  EA V+ + +H+N+V+L+G          +V E+M   S
Sbjct: 216 GNKVAVKCIKNDATAQ--AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273

Query: 71  LDFF 74
           L  +
Sbjct: 274 LVDY 277

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 52.3 bits (126), Expect = 8e-10
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 9/77 (11%)

Query: 10  PDGQVIAVKRLSGRTSQG-------IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILV 62
            D  V+A+K L    S+G         EF+ E  +++   H NIV+L G   + P   +V
Sbjct: 42  KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMV 99

Query: 63  YEFMPNKSLDFFIFGRS 79
            EF+P   L   +  ++
Sbjct: 100 MEFVPCGDLYHRLLDKA 116

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 52.2 bits (126), Expect = 8e-10
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)

Query: 12  GQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVYEFMPNK 69
           G  +AVK + +  T+Q    F  EA V+ + +H+N+V+L+G          +V E+M   
Sbjct: 44  GNKVAVKCIKNDATAQ---AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 100

Query: 70  SLDFF 74
           SL  +
Sbjct: 101 SLVDY 105

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 52.4 bits (126), Expect = 8e-10
 Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 4   LLQGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERIL 61
           L + K      +AVK L S  T + + +  +E +++    +H NI+ L+G         +
Sbjct: 93  LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152

Query: 62  VYEFMPNKSL 71
           + E+    +L
Sbjct: 153 IVEYASKGNL 162

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 52.3 bits (125), Expect = 1e-09
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 8   KLPDGQV-IAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           ++   Q+ +A+K L  G       E   EA+++ +  +  IVRLIG        + V E 
Sbjct: 358 RMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALML-VMEM 416

Query: 66  MPNKSLDFFI 75
                L  F+
Sbjct: 417 AGGGPLHKFL 426

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 52.0 bits (125), Expect = 1e-09
 Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 12  GQVIAVKRL--SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK 69
           G+V A++ +         +  FK E     + +H N+V  +G  +  P   ++      +
Sbjct: 56  GEV-AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114

Query: 70  SL 71
           +L
Sbjct: 115 TL 116

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 51.9 bits (125), Expect = 1e-09
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 16  AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF 74
            +K +      Q      +    I    H +IVRL+G       ++ V +++P  SL   
Sbjct: 46  CIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDH 104

Query: 75  I 75
           +
Sbjct: 105 V 105

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 52.0 bits (125), Expect = 1e-09
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER--ILVYEFMPNK 69
           G ++AVK+L         +F+ E +++       IV+  G S     +   LV E++P+ 
Sbjct: 52  GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111

Query: 70  SLDFF 74
            L  F
Sbjct: 112 CLRDF 116

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 51.9 bits (125), Expect = 1e-09
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 16  AVKRL-SGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
           AVK L S   +       +E K+++   QH NIV L+G   HG   +++ E+     L
Sbjct: 80  AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 51.9 bits (125), Expect = 1e-09
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 16  AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF 74
           A+K L    + +   E  +EA V+A   + ++ RL+G  L    ++ + + MP   L  +
Sbjct: 48  AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDY 106

Query: 75  I 75
           +
Sbjct: 107 V 107

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 51.5 bits (124), Expect = 1e-09
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 16  AVKRL-SGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
           AVK L     S       +E K++ +   H NIV L+G         L++E+     L
Sbjct: 79  AVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)

Query: 8   KLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIG-CSLHGPERILVYE 64
           K    + +AVK L  G T        +E K++     H N+V L+G C+  G   +++ E
Sbjct: 53  KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 112

Query: 65  FMPNKSL 71
           F    +L
Sbjct: 113 FCKFGNL 119

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 51.1 bits (123), Expect = 2e-09
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 8  KLPDGQV-IAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
          ++   Q+ +A+K L  G       E   EA+++ +  +  IVRLIG        + V E 
Sbjct: 32 RMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALML-VMEM 90

Query: 66 MPNKSLDFF 74
               L  F
Sbjct: 91 AGGGPLHKF 99

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 50.7 bits (122), Expect = 2e-09
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 6   QGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVY 63
            GK      +A+K +  G  S+   EF  EAKV+    H  +V+L G C+   P  I + 
Sbjct: 42  YGKWRGQYDVAIKMIKEGSMSE--DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI-IT 98

Query: 64  EFMPNKSLDFF 74
           E+M N  L  +
Sbjct: 99  EYMANGCLLNY 109

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 50.7 bits (122), Expect = 2e-09
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 8   KLPDGQVI--AVKRL-SGRTSQG--IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILV 62
             P G+ +  AVK L     SQ   + +F  E   +    H N++RL G  L  P ++ V
Sbjct: 40  DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-V 98

Query: 63  YEFMPNKSLDFFI 75
            E  P  SL   +
Sbjct: 99  TELAPLGSLLDRL 111

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 50.8 bits (122), Expect = 2e-09
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)

Query: 12 GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
           + +A+K++   +      F  E + +++  H NIV+L G  L+     LV E+    SL
Sbjct: 31 AKDVAIKQI--ESESERKAFIVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSL 86

Query: 72 DFFIFGR 78
             + G 
Sbjct: 87 YNVLHGA 93

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 50.7 bits (122), Expect = 3e-09
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 8   KLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
             P+   +  A+K   +  +     +F  EA  + +  H +IV+LIG     P  I + E
Sbjct: 37  MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IME 95

Query: 65  FMPNKSLDFF 74
                 L  F
Sbjct: 96  LCTLGELRSF 105

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 50.3 bits (121), Expect = 3e-09
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 6  QGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVY 63
           G   +   +A+K +  G  S+   +F  EA+V+ K  H  +V+L G C    P  + V 
Sbjct: 26 LGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL-VT 82

Query: 64 EFMPNKSLDFF 74
          EFM +  L  +
Sbjct: 83 EFMEHGCLSDY 93

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 50.4 bits (121), Expect = 4e-09
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 12  GQVIAVKRL--SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK 69
           G V AVK L  +  T Q +  FKNE  V+ K +H NI+  +G S      I V ++    
Sbjct: 47  GDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGS 104

Query: 70  SL 71
           SL
Sbjct: 105 SL 106

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 50.3 bits (121), Expect = 4e-09
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 8   KLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
               G+ I  AVK      T     +F +EA ++    H +IV+LIG     P  I + E
Sbjct: 34  TNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWI-IME 92

Query: 65  FMPNKSLDFFI 75
             P   L  ++
Sbjct: 93  LYPYGELGHYL 103

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 49.9 bits (120), Expect = 5e-09
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 16  AVKRL-SGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
           AVK L             +E KV++    H NIV L+G    G   +++ E+     L
Sbjct: 57  AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 114

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 50.0 bits (120), Expect = 6e-09
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 4   LLQGKLPDGQVIAVKRL--SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERI 60
            L+ +      +AVK +     + + I EF +EA  +    H N++RL+G C     + I
Sbjct: 54  NLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113

Query: 61  ----LVYEFMPNKSLDFFI 75
               ++  FM    L  ++
Sbjct: 114 PKPMVILPFMKYGDLHTYL 132

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 49.5 bits (119), Expect = 7e-09
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%)

Query: 6  QGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVY 63
           GK      +AVK +  G  S+   EF  EA+ + K  H  +V+  G CS   P  I V 
Sbjct: 26 LGKWKGQYDVAVKMIKEGSMSE--DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYI-VT 82

Query: 64 EFMPNKSLDFF 74
          E++ N  L  +
Sbjct: 83 EYISNGCLLNY 93

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 49.5 bits (118), Expect = 1e-08
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 8   KLPDGQVI--AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
             P+   +  A+K   +  +     +F  EA  + +  H +IV+LIG     P  I + E
Sbjct: 412 MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI-IME 470

Query: 65  FMPNKSLDFF 74
                 L  F
Sbjct: 471 LCTLGELRSF 480

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 48.5 bits (116), Expect = 2e-08
 Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 9/76 (11%)

Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKP--QHTNIVRLIGCSLHG----PERILVYEF 65
           G+ +AVK  S R  +    +  E ++      +H NI+  I   +       +  L+  +
Sbjct: 31  GENVAVKIFSSRDEK---SWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHY 87

Query: 66  MPNKSLDFFIFGRSFS 81
               SL  ++   +  
Sbjct: 88  HEMGSLYDYLQLTTLD 103

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 48.1 bits (115), Expect = 2e-08
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 8/80 (10%)

Query: 4   LLQGKLPDGQVIAVKRL--SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERI 60
            L+ +      +AVK L      S  I EF  EA  + +  H ++ +L+G       +  
Sbjct: 43  QLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102

Query: 61  -----LVYEFMPNKSLDFFI 75
                ++  FM +  L  F+
Sbjct: 103 LPIPMVILPFMKHGDLHAFL 122

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 48.0 bits (115), Expect = 2e-08
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 16 AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVYEFMPNKSLDF 73
          AVK L          EF  EA V+ + +H N+V+L+G C+   P  I + EFM   +L  
Sbjct: 42 AVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI-ITEFMTYGNLLD 98

Query: 74 F 74
          +
Sbjct: 99 Y 99

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 48.0 bits (115), Expect = 2e-08
 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 4   LLQGKLPDGQVIAVKRL-SGRTSQGIV-EFKNEAKVIAKPQHTNIVRLIGCSLHGPERIL 61
             Q K     V AVK L +      +  E   EA V+ +  +  IVR+IG        + 
Sbjct: 37  YYQMKKVVKTV-AVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWML- 94

Query: 62  VYEFMPNKSLDFF 74
           V E      L+ +
Sbjct: 95  VMEMAELGPLNKY 107

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 48.2 bits (115), Expect = 3e-08
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 9/66 (13%)

Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKP--QHTNIVRLIGCSLHGPERI----LVYEF 65
           G+ +AVK      +     +  E ++      +H NI+  I   + G        L+ ++
Sbjct: 60  GEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDY 116

Query: 66  MPNKSL 71
             N SL
Sbjct: 117 HENGSL 122

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 48.0 bits (115), Expect = 3e-08
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 6  QGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           G       +AVK L  G  S     F  EA ++ + QH  +VRL       P  I + E
Sbjct: 31 MGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVVTQEPIYI-ITE 87

Query: 65 FMPNKSLDFF 74
          +M N SL  F
Sbjct: 88 YMENGSLVDF 97

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 47.8 bits (114), Expect = 3e-08
 Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 6   QGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
                    +AVK +  G  S     F  EA V+   QH  +V+L       P  I + E
Sbjct: 206 MATYNKHTKVAVKTMKPGSMSV--EAFLAEANVMKTLQHDKLVKLHAVVTKEPIYI-ITE 262

Query: 65  FMPNKSLDFF 74
           FM   SL  F
Sbjct: 263 FMAKGSLLDF 272

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 47.8 bits (114), Expect = 4e-08
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 16  AVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVYEFMPNKSLDF 73
           AVK L          EF  EA V+ + +H N+V+L+G C+   P  I + EFM   +L  
Sbjct: 249 AVKTLKEDTMEVE--EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI-ITEFMTYGNLLD 305

Query: 74  F 74
           +
Sbjct: 306 Y 306

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 47.1 bits (112), Expect = 6e-08
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 9/67 (13%)

Query: 11  DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP--QHTNIVRLIGCSLH----GPERILVYE 64
            G+ +AVK  S R  +    +  EA++      +H NI+  I           +  LV +
Sbjct: 64  RGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 120

Query: 65  FMPNKSL 71
           +  + SL
Sbjct: 121 YHEHGSL 127

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 44.9 bits (106), Expect = 3e-07
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 6   QGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
            G       +A+K L  G  S     F  EA+V+ K +H  +V+L       P  I V E
Sbjct: 285 MGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTE 341

Query: 65  FMPNKSLDFF 74
           +M   SL  F
Sbjct: 342 YMSKGSLLDF 351

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 44.7 bits (106), Expect = 4e-07
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 6   QGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
            G       +A+K L  G  S     F  EA+V+ K +H  +V+L       P  I V E
Sbjct: 202 MGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTE 258

Query: 65  FMPNKSLDFF 74
           +M   SL  F
Sbjct: 259 YMSKGSLLDF 268

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 44.2 bits (105), Expect = 6e-07
 Identities = 16/63 (25%), Positives = 26/63 (41%)

Query: 9   LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           L +   IA+K +  R S+       E  +    +H NIV+ +G         +  E +P 
Sbjct: 44  LSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103

Query: 69  KSL 71
            SL
Sbjct: 104 GSL 106

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 43.0 bits (101), Expect = 2e-06
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 8   KLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIG-CSLHGPERILVYE 64
           K    + +AVK L  G T        +E K++     H N+V L+G C+  G   +++ E
Sbjct: 48  KTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 107

Query: 65  FMPNKSLDFFI 75
           F    +L  ++
Sbjct: 108 FCKFGNLSTYL 118

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 39.6 bits (93), Expect = 2e-05
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 6/67 (8%)

Query: 11  DGQVIAVK--RLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER----ILVYE 64
               +A    +    T      FK EA+++   QH NIVR         +     +LV E
Sbjct: 50  TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109

Query: 65  FMPNKSL 71
            M + +L
Sbjct: 110 LMTSGTL 116

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 38.9 bits (91), Expect = 5e-05
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 11  DGQVIAVK--RLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
           DG+   +K   +S  +S+   E + E  V+A  +H NIV+            +V ++   
Sbjct: 48  DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107

Query: 69  KSLDFFIFGRSFSTFE 84
             L   I  +    F+
Sbjct: 108 GDLFKRINAQKGVLFQ 123

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 38.5 bits (90), Expect = 7e-05
 Identities = 15/62 (24%), Positives = 33/62 (53%)

Query: 11  DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
            G + A K +  ++ + + ++  E +++A   H  IV+L+G   H  +  ++ EF P  +
Sbjct: 43  TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102

Query: 71  LD 72
           +D
Sbjct: 103 VD 104

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 38.1 bits (89), Expect = 8e-05
 Identities = 18/61 (29%), Positives = 29/61 (47%)

Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
           G+ +AVK +  R  Q      NE  ++   QH N+V +    L G E  ++ EF+   +L
Sbjct: 70  GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129

Query: 72  D 72
            
Sbjct: 130 T 130

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 11  DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER----ILVYEFM 66
           DG   A+KR+     Q   E + EA +     H NI+RL+   L          L+  F 
Sbjct: 53  DGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112

Query: 67  PNKSLDFFI 75
              +L   I
Sbjct: 113 KRGTLWNEI 121

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 5/82 (6%)

Query: 8   KLPDGQVIAVKR--LSGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYE 64
           K  DG + A+KR       S        E    A   QH+++VR           ++  E
Sbjct: 32  KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 91

Query: 65  FMPNKSLDFFI--FGRSFSTFE 84
           +    SL   I    R  S F+
Sbjct: 92  YCNGGSLADAISENYRIMSYFK 113

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 16/60 (26%), Positives = 31/60 (51%)

Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
           GQ +A+++++ +         NE  V+ + ++ NIV  +   L G E  +V E++   SL
Sbjct: 45  GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 37.6 bits (87), Expect = 1e-04
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 9   LPDGQVIAVKR--LSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
            P G+ + V+R  L   +++ +   + E  V     H NIV      +   E  +V  FM
Sbjct: 49  KPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108

Query: 67  PNKSL 71
              S 
Sbjct: 109 AYGSA 113

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 5/79 (6%)

Query: 11  DGQVIAVK--RLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP 67
           DG  +A+K  ++      +   +   E  ++ +  H N+++     +   E  +V E   
Sbjct: 56  DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD 115

Query: 68  NKSLDFFI--FGRSFSTFE 84
              L   I  F +      
Sbjct: 116 AGDLSRMIKHFKKQKRLIP 134

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 37.4 bits (87), Expect = 2e-04
 Identities = 15/60 (25%), Positives = 20/60 (33%), Gaps = 5/60 (8%)

Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
           G   AVK++     +       E    A      IV L G    GP   +  E +   SL
Sbjct: 83  GFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 10/64 (15%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 9   LPDGQVIAVKRLSGRTSQG-IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP 67
               +V+A+K +    ++  I + + E  V+++     + +  G  L   +  ++ E++ 
Sbjct: 44  NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 103

Query: 68  NKSL 71
             S 
Sbjct: 104 GGSA 107

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 35.8 bits (83), Expect = 5e-04
 Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 1/62 (1%)

Query: 11 DGQVIAVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK 69
          D    A+KR+          +   E K +AK +H  IVR     L       +    P  
Sbjct: 29 DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88

Query: 70 SL 71
           L
Sbjct: 89 YL 90

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 35.4 bits (82), Expect = 7e-04
 Identities = 11/61 (18%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 12  GQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL 71
           GQ++A+K++       + E   E  ++ +    ++V+  G      +  +V E+    S+
Sbjct: 54  GQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111

Query: 72  D 72
            
Sbjct: 112 S 112

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 35.0 bits (81), Expect = 9e-04
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 9   LPDGQVIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP 67
            P  + +A+KR++    Q  + E   E + +++  H NIV      +   E  LV + + 
Sbjct: 37  APKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLS 96

Query: 68  NKSL 71
             S+
Sbjct: 97  GGSV 100

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	86
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.81
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.81
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.79
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.78
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.77
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.77
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.7
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.7
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.7
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.69
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.69
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.68
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.66
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.65
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.59
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.57
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.56
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.55
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.54
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.54
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.54
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.53
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.51
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.51
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.51
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.5
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.49
3uqc_A	286	Probable conserved transmembrane protein; structur	99.49
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.48
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.48
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.48
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.48
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.47
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.47
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.47
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.47
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.46
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.46
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.46
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.45
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.44
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.44
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.44
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.44
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.43
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.43
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.43
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.43
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.43
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.43
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.42
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.42
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.42
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.42
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.42
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.42
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.42
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.42
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.41
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.41
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.41
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.41
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.41
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.41
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.41
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.4
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.4
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.4
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.4
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.4
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.39
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.39
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.39
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.39
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.39
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.39
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.39
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.39
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.39
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.38
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.38
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.37
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.37
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.37
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.37
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.37
3bhy_A	283	Death-associated protein kinase 3; death associate	99.36
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.36
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.36
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.36
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.35
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.35
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.35
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.35
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.35
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.35
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.34
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.34
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.34
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.34
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.33
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.33
3niz_A	311	Rhodanese family protein; structural genomics, str	99.33
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.33
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.33
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.33
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.33
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.33
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.32
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.32
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.32
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.32
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.32
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.32
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.32
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.32
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.32
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.32
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.32
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.31
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.31
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.31
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.31
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.31
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.31
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.3
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.3
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.3
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.3
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.3
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.3
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.3
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.3
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.29
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.29
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.29
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.29
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.29
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.29
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.29
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.28
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.28
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.28
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.28
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.28
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.28
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.27
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.27
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.27
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.27
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.26
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.26
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.26
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.26
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.26
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.25
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.25
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.25
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.24
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.24
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.24
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.24
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.24
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.24
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.23
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.23
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.22
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.22
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.22
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.21
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.21
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.21
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.21
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.2
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.2
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.2
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.2
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.19
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.19
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.18
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.17
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.16
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.16
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.16
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.16
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.16
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.16
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.16
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.15
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.15
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.14
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.14
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.13
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.13
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.13
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.13
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.13
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.12
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.12
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.12
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.12
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.11
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.11
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.1
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.09
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.08
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.07
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.06
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.06
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.05
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.04
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.03
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.02
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.01
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.99
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.99
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.99
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.95
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.95
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.94
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.94
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.92
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.89
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.89
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.89
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.88
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.86
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.85
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.85
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.82
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.79
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.77
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.76
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.76
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.74
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.72
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.72
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.71
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.71
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.85
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.61
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.61
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.52
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.5
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.07
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.04
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	94.93
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	94.05
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	86.74

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.81  E-value=3.6e-19  Score=94.79  Aligned_cols=79  Identities=25%  Similarity=0.446  Sum_probs=69.3

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|.+.      ++..||+|.++.......+.|.+|+.+++.++||||+++++.+..++.+++++||+++|+|.++
T Consensus        54 fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~  133 (329)
T 4aoj_A           54 FGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF  133 (329)
T ss_dssp             SEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred             CcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHH
Confidence            7999999853      3678999999866555567899999999999999999999999999999999999999999999


Q ss_pred             hccCC
Q 038959           75 IFGRS   79 (86)
Q Consensus        75 l~~~~   79 (86)
                      ++...
T Consensus       134 l~~~~  138 (329)
T 4aoj_A          134 LRSHG  138 (329)
T ss_dssp             HHTSS
T ss_pred             HHhcC
Confidence            97653

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.81  E-value=3.7e-19  Score=93.70  Aligned_cols=78  Identities=26%  Similarity=0.456  Sum_probs=68.4

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|.+.      ++..||+|.++.......+.+.+|+.+++.++||||+++++.+..++..++++||+++|+|.++
T Consensus        26 fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~  105 (299)
T 4asz_A           26 FGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF  105 (299)
T ss_dssp             CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred             CcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHH
Confidence            8999999842      3668999999866555566899999999999999999999999999999999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +++.
T Consensus       106 l~~~  109 (299)
T 4asz_A          106 LRAH  109 (299)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            9753

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.79  E-value=1.6e-18  Score=91.61  Aligned_cols=78  Identities=26%  Similarity=0.396  Sum_probs=66.0

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||+|.+.      .+..||+|.++... ....+.|.+|+.+++.++||||+++++.+..++.+++++||+++|+|.+
T Consensus        39 fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~  118 (308)
T 4gt4_A           39 FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE  118 (308)
T ss_dssp             SCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHH
T ss_pred             CcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHH
Confidence            8999999852      35689999997443 3345689999999999999999999999999999999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus       119 ~L~~~  123 (308)
T 4gt4_A          119 FLVMR  123 (308)
T ss_dssp             HHHTT
T ss_pred             HHHhh
Confidence            99754

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.78  E-value=6.1e-18  Score=90.65  Aligned_cols=80  Identities=20%  Similarity=0.141  Sum_probs=67.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++. ..++..+|+|.++...  ....+.+.+|+.+++.++||||+++++.+...+.++++|||+++|+|.++|..
T Consensus        37 fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~  116 (350)
T 4b9d_A           37 FGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA  116 (350)
T ss_dssp             --CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHH
Confidence            79999998 4579999999997442  23445789999999999999999999999999999999999999999999975


Q ss_pred             CCC
Q 038959           78 RSF   80 (86)
Q Consensus        78 ~~~   80 (86)
                      .+.
T Consensus       117 ~~~  119 (350)
T 4b9d_A          117 QKG  119 (350)
T ss_dssp             TTT
T ss_pred             cCC
Confidence            543

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.77  E-value=2.7e-18  Score=93.85  Aligned_cols=80  Identities=24%  Similarity=0.303  Sum_probs=70.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||++. ..++..||+|.++.......+.+.+|+.+++.++|+||+++++.+...+.++++|||+++|+|.+++...+
T Consensus       164 fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~~  243 (423)
T 4fie_A          164 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR  243 (423)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHSC
T ss_pred             CcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhccC
Confidence            79999999 45799999999975554555678899999999999999999999999999999999999999999987654


Q ss_pred             C
Q 038959           80 F   80 (86)
Q Consensus        80 ~   80 (86)
                      .
T Consensus       244 l  244 (423)
T 4fie_A          244 M  244 (423)
T ss_dssp             C
T ss_pred             C
Confidence            3

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.77  E-value=1.1e-18  Score=93.30  Aligned_cols=80  Identities=24%  Similarity=0.319  Sum_probs=69.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||++.. .++..+|+|.++.......+.+.+|+.+++.++||||+++++.+...+.++++|||+++|+|.+++...+
T Consensus        87 fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~  166 (346)
T 4fih_A           87 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR  166 (346)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHSC
T ss_pred             CeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcCC
Confidence            799999994 5799999999974433444568899999999999999999999999999999999999999999987654


Q ss_pred             C
Q 038959           80 F   80 (86)
Q Consensus        80 ~   80 (86)
                      .
T Consensus       167 l  167 (346)
T 4fih_A          167 M  167 (346)
T ss_dssp             C
T ss_pred             C
Confidence            3

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.70  E-value=4.9e-17  Score=86.03  Aligned_cols=78  Identities=18%  Similarity=0.166  Sum_probs=67.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+. ..++..+|+|.++..   .......+.+|+.+++.++||||+++++.+...+.++++|||+++|+|.+++.
T Consensus        45 fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~  124 (311)
T 4aw0_A           45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR  124 (311)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHH
Confidence            78999998 557999999999632   12334578899999999999999999999999999999999999999999997


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      +.
T Consensus       125 ~~  126 (311)
T 4aw0_A          125 KI  126 (311)
T ss_dssp             HH
T ss_pred             Hc
Confidence            54

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.70  E-value=1.8e-16  Score=83.28  Aligned_cols=79  Identities=25%  Similarity=0.245  Sum_probs=65.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeee----CCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH----GPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++.. .++..+|+|.+...  .....+.+.+|+.+++.++||||+++++.+..    ...+++++||+++|+|.+
T Consensus        39 fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~  118 (290)
T 3fpq_A           39 FKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKT  118 (290)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHH
T ss_pred             CcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHH
Confidence            799999984 57889999999643  22334578999999999999999999998754    345899999999999999


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++.+..
T Consensus       119 ~l~~~~  124 (290)
T 3fpq_A          119 YLKRFK  124 (290)
T ss_dssp             HHHHHS
T ss_pred             HHHhcC
Confidence            997643

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.70  E-value=5e-16  Score=82.16  Aligned_cols=75  Identities=24%  Similarity=0.306  Sum_probs=62.2

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||+|.+..  .+|+|.++...  ....+.+.+|+.+++.++|||++++++.+. .+.+++++||+++|+|.+++...
T Consensus        49 fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL~~~l~~~  125 (307)
T 3omv_A           49 FGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQ  125 (307)
T ss_dssp             SSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHTS
T ss_pred             CcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCCHHHHHhhc
Confidence            89999998643  68999997432  233457899999999999999999999875 45689999999999999999754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.69  E-value=7.3e-16  Score=81.28  Aligned_cols=79  Identities=22%  Similarity=0.224  Sum_probs=63.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCC------------ceEEEEecc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP------------ERILVYEFM   66 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------~~~l~~e~~   66 (86)
                      ||.||++.. .++..+|+|.++.. .....+.+.+|+.+++.++||||+++++.+...+            .+++++||+
T Consensus        18 fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~   97 (299)
T 4g31_A           18 FGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLC   97 (299)
T ss_dssp             --EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECC
T ss_pred             CeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecC
Confidence            799999984 57899999999643 2334457889999999999999999999876433            368999999


Q ss_pred             CCCChhhhhccCC
Q 038959           67 PNKSLDFFIFGRS   79 (86)
Q Consensus        67 ~~g~l~~~l~~~~   79 (86)
                      ++|+|.+++.+..
T Consensus        98 ~gg~L~~~l~~~~  110 (299)
T 4g31_A           98 RKENLKDWMNGRC  110 (299)
T ss_dssp             CSCCHHHHHHTCC
T ss_pred             CCCcHHHHHHhcC
Confidence            9999999998653

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.69  E-value=5.9e-16  Score=87.41  Aligned_cols=78  Identities=17%  Similarity=0.169  Sum_probs=69.4

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++. ..+|..+|+|.+........+.+.+|+.+++.++||||+++++.+.....+++++||+++|+|.+++...
T Consensus       170 fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~  248 (573)
T 3uto_A          170 FGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE  248 (573)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCT
T ss_pred             CeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHh
Confidence            78999998 4579999999997655555667889999999999999999999999999999999999999999998654

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.68  E-value=2.5e-16  Score=84.11  Aligned_cols=73  Identities=23%  Similarity=0.139  Sum_probs=63.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++. ..++..+|+|.++....     ..+|+.+++.++||||+++++.+...+.++++|||+++|+|.+++.+.
T Consensus        71 fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~  144 (336)
T 4g3f_A           71 FGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM  144 (336)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHc
Confidence            79999999 45799999999975432     246889999999999999999999999999999999999999999754

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.66  E-value=1.8e-15  Score=79.01  Aligned_cols=78  Identities=21%  Similarity=0.229  Sum_probs=64.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++. ..++..+|+|.++...   ......+.+|+.+++.++|||++++++.+...+.++++|||+ +|+|.+++.
T Consensus        26 fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~  104 (275)
T 3hyh_A           26 FGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIV  104 (275)
T ss_dssp             -CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHH
Confidence            79999998 4579999999996432   223456889999999999999999999999999999999999 679999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      +..
T Consensus       105 ~~~  107 (275)
T 3hyh_A          105 QRD  107 (275)
T ss_dssp             HSC
T ss_pred             HcC
Confidence            653

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.65  E-value=9.2e-16  Score=81.00  Aligned_cols=75  Identities=23%  Similarity=0.254  Sum_probs=59.1

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHH--HHHHHHHhcCCCCcccceeeeeeeCC----ceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEF--KNEAKVIAKPQHTNIVRLIGCSLHGP----ERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|++ .|..||+|.++..   ....+  ..|+..+..++|||++++++.+...+    .+++++||+++|+|.++
T Consensus        16 fG~Vy~~~~-~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~   91 (303)
T 3hmm_A           16 FGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDY   91 (303)
T ss_dssp             SSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHH
T ss_pred             CeEEEEEEE-CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHH
Confidence            899999987 5789999999642   22233  34555666789999999999987543    57899999999999999


Q ss_pred             hccCC
Q 038959           75 IFGRS   79 (86)
Q Consensus        75 l~~~~   79 (86)
                      ++...
T Consensus        92 l~~~~   96 (303)
T 3hmm_A           92 LNRYT   96 (303)
T ss_dssp             HHHCC
T ss_pred             HHhCC
Confidence            97653

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.59  E-value=5.6e-16  Score=81.87  Aligned_cols=78  Identities=21%  Similarity=0.139  Sum_probs=60.1

Q ss_pred             CCceEEEEc----CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL----PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~----~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.++.    .++..+|+|.++...  ......+.+|+.++..++|||++++++.+..++.++++|||+++|+|.++
T Consensus        37 fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~  116 (304)
T 3ubd_A           37 FGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTR  116 (304)
T ss_dssp             GCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHH
T ss_pred             CeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHH
Confidence            789999973    246789999996432  12233677899999999999999999999999999999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +.+.
T Consensus       117 l~~~  120 (304)
T 3ubd_A          117 LSKE  120 (304)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            8764

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.57  E-value=1.2e-14  Score=78.18  Aligned_cols=78  Identities=19%  Similarity=0.291  Sum_probs=62.6

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCC-CCcccceeeeeee-CCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLH-GPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l   71 (86)
                      ||.||+|.+.      .+..||+|.+.... ......+.+|+.++..+. ||||+++++.|.. .+.+++++||+++|+|
T Consensus        77 fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L  156 (353)
T 4ase_A           77 FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL  156 (353)
T ss_dssp             SEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEH
T ss_pred             CeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCH
Confidence            8999999842      23579999997543 233457899999999985 5999999999865 4678999999999999


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      .++|++.
T Consensus       157 ~~~L~~~  163 (353)
T 4ase_A          157 STYLRSK  163 (353)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhc
Confidence            9999754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.56  E-value=9e-14  Score=73.56  Aligned_cols=79  Identities=34%  Similarity=0.557  Sum_probs=70.0

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||++...++..+|+|.+..........+.+|+..++.+.|+|++++++.+...+..++++|++++|+|.+++....
T Consensus        52 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  130 (321)
T 2qkw_B           52 FGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD  130 (321)
T ss_dssp             SSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSC
T ss_pred             CeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccC
Confidence            6899999977789999999876555566788999999999999999999999998999999999999999999987543

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.55  E-value=6.7e-14  Score=76.32  Aligned_cols=78  Identities=17%  Similarity=0.188  Sum_probs=63.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeee------CCceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH------GPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~l~~e~~~~g~l   71 (86)
                      ||.||++. ..++..||+|.++...  ......+.+|+.+++.++|||++++++.+..      ...++++|||++ |+|
T Consensus        67 fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L  145 (398)
T 4b99_A           67 YGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDL  145 (398)
T ss_dssp             SCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEH
T ss_pred             CeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCH
Confidence            79999998 4579999999997432  2334568899999999999999999998753      357899999996 679


Q ss_pred             hhhhccCC
Q 038959           72 DFFIFGRS   79 (86)
Q Consensus        72 ~~~l~~~~   79 (86)
                      ..++.+..
T Consensus       146 ~~~i~~~~  153 (398)
T 4b99_A          146 HQIIHSSQ  153 (398)
T ss_dssp             HHHHTSSS
T ss_pred             HHHHHhcC
Confidence            99887654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.54  E-value=2.7e-13  Score=71.93  Aligned_cols=78  Identities=23%  Similarity=0.249  Sum_probs=69.1

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+... ++..+|+|.++.........+.+|+..+..+.|+|++++.+.+...+..++++|++++++|.+++...
T Consensus        58 ~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  136 (321)
T 2c30_A           58 TGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV  136 (321)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC
T ss_pred             CeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc
Confidence            6889999854 78999999998665566678899999999999999999999999999999999999999999988754

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.54  E-value=2.2e-13  Score=71.77  Aligned_cols=78  Identities=19%  Similarity=0.253  Sum_probs=68.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.+..........+.+|+..+..+.|+|++++++.+......++++|++++|+|.+++...
T Consensus        23 ~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  101 (310)
T 3s95_A           23 FGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSM  101 (310)
T ss_dssp             SEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHC
T ss_pred             CEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhc
Confidence            688999984 468899999987655556668899999999999999999999999999999999999999999998763

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.54  E-value=9.9e-14  Score=74.98  Aligned_cols=78  Identities=22%  Similarity=0.236  Sum_probs=66.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+|+|.++.........+.+|+.++..+.|+|++++++.+...+..++++|++++|+|.+++...
T Consensus       102 ~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~  180 (373)
T 2x4f_A          102 FGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE  180 (373)
T ss_dssp             --CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHT
T ss_pred             CEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhc
Confidence            689999984 578999999998665556668899999999999999999999999999999999999999998887643

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.53  E-value=1.7e-13  Score=71.98  Aligned_cols=79  Identities=20%  Similarity=0.289  Sum_probs=68.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.+. ..++..+|+|.+..........+.+|+..+..+.|+|++++++.+...+..++++|++++|+|.+++....
T Consensus        33 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~  112 (297)
T 3fxz_A           33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC  112 (297)
T ss_dssp             TEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSC
T ss_pred             CeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhcC
Confidence            68899998 45789999999875444556678899999999999999999999999999999999999999999987653

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.51  E-value=2.7e-13  Score=75.53  Aligned_cols=78  Identities=27%  Similarity=0.366  Sum_probs=68.0

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||+|.+. .+..+|+|.++... .....+.+|+.+++.+.|+|++++++.+......++++|++++|+|.+++....
T Consensus       233 fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~  311 (495)
T 1opk_A          233 YGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN  311 (495)
T ss_dssp             TSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSC
T ss_pred             CeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcC
Confidence            7899999954 58899999997543 345688999999999999999999999998899999999999999999997643

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.51  E-value=5.7e-13  Score=71.84  Aligned_cols=78  Identities=19%  Similarity=0.212  Sum_probs=66.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc------ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.. .++..+|+|.++....      .....+.+|+.++..+.|||++++++.+......++++|++++|+|.+
T Consensus        25 fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~  104 (361)
T 2yab_A           25 FAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFD  104 (361)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             CEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHH
Confidence            789999984 4789999999964321      135678899999999999999999999999999999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus       105 ~l~~~  109 (361)
T 2yab_A          105 FLAQK  109 (361)
T ss_dssp             HHTTC
T ss_pred             HHHhc
Confidence            98754

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.51  E-value=6.2e-13  Score=72.27  Aligned_cols=78  Identities=18%  Similarity=0.169  Sum_probs=68.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+++|.+..........+.+|+.++..+.|+|++++++.+......++++|++++|+|.+++...
T Consensus        64 ~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~  142 (387)
T 1kob_A           64 FGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE  142 (387)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCT
T ss_pred             CEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhh
Confidence            688999984 478899999997655445567889999999999999999999999999999999999999999988754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.50  E-value=9.4e-13  Score=68.15  Aligned_cols=78  Identities=24%  Similarity=0.340  Sum_probs=67.6

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.+....+..+|+|.+.... .....+.+|+..+..+.|+|++++.+.+......++++|++++++|.+++....
T Consensus        23 ~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  100 (269)
T 4hcu_A           23 FGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR  100 (269)
T ss_dssp             SCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTT
T ss_pred             ccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcC
Confidence            689999997678889999997543 344678899999999999999999999998899999999999999999987543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.49  E-value=4e-13  Score=77.21  Aligned_cols=78  Identities=14%  Similarity=0.134  Sum_probs=61.4

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHH---HHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKN---EAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.++ ..++..+|+|.++...   .........   ++..++.++||||+++++.+...+.++++|||+++|+|..
T Consensus       202 fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~  281 (689)
T 3v5w_A          202 FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY  281 (689)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHH
Confidence            79999998 4579999999995321   111222233   3556677899999999999999999999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      +|...
T Consensus       282 ~l~~~  286 (689)
T 3v5w_A          282 HLSQH  286 (689)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            98754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.49  E-value=5.9e-13  Score=69.75  Aligned_cols=78  Identities=10%  Similarity=0.056  Sum_probs=66.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+......   ....+..|+..+..+.|+|++++++.+...+..++++|++++++|.+++.
T Consensus        44 ~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~  123 (286)
T 3uqc_A           44 PLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVAD  123 (286)
T ss_dssp             TCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHT
T ss_pred             CeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHh
Confidence            688999985 46889999999754322   23578889999999999999999999999999999999999999999986


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       124 ~~  125 (286)
T 3uqc_A          124 TS  125 (286)
T ss_dssp             TC
T ss_pred             cC
Confidence            43

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.48  E-value=5.1e-13  Score=72.20  Aligned_cols=78  Identities=29%  Similarity=0.411  Sum_probs=65.6

Q ss_pred             CCceEEEEcC----CCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP----DGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+|...    .+..+|+|.++.. .......+.+|+.++..+.|+|++++.+.+......++++|++++|+|.+++
T Consensus        58 fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l  137 (373)
T 2qol_A           58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL  137 (373)
T ss_dssp             SSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHH
T ss_pred             CeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHH
Confidence            7899999853    4668999999754 2334457899999999999999999999999889999999999999999999


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       138 ~~~  140 (373)
T 2qol_A          138 RKH  140 (373)
T ss_dssp             HTT
T ss_pred             HhC
Confidence            754

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.48  E-value=1.1e-12  Score=69.67  Aligned_cols=78  Identities=18%  Similarity=0.230  Sum_probs=66.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc------ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.. .++..+|+|.+.....      .....+.+|+.++..+.|+|++++.+.+......++++|++++|+|.+
T Consensus        24 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  103 (326)
T 2y0a_A           24 FAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD  103 (326)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             CeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHH
Confidence            688999984 4688999999864321      235678899999999999999999999999999999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus       104 ~l~~~  108 (326)
T 2y0a_A          104 FLAEK  108 (326)
T ss_dssp             HHTTS
T ss_pred             HHHhc
Confidence            98754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.48  E-value=2.7e-12  Score=67.93  Aligned_cols=79  Identities=22%  Similarity=0.236  Sum_probs=64.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC---------------------
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP---------------------   57 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------------------   57 (86)
                      ||.||++... ++..+|+|.++... ......+.+|+.+++.++|+|++++++.+....                     
T Consensus        19 ~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (332)
T 3qd2_B           19 FGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWP   98 (332)
T ss_dssp             CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-----------
T ss_pred             CeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhcccccccc
Confidence            7899999954 78999999997433 334567899999999999999999998875432                     


Q ss_pred             ------------------------------------ceEEEEeccCCCChhhhhccCC
Q 038959           58 ------------------------------------ERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus        58 ------------------------------------~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                                                          ..++++|++++|+|.+++....
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~  156 (332)
T 3qd2_B           99 LSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC  156 (332)
T ss_dssp             ---------------------------------CCCEEEEEEECCCSSCHHHHHHTCC
T ss_pred             ccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc
Confidence                                                3789999999999999987653

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.47  E-value=1.1e-12  Score=71.01  Aligned_cols=78  Identities=21%  Similarity=0.229  Sum_probs=66.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .++..+|+|.+....  ......+.+|+.+++.+.|+|++++++.+...+..++++|++++|+|.+++..
T Consensus        40 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  119 (389)
T 3gni_B           40 LMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT  119 (389)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred             ceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhh
Confidence            578999995 478999999996432  23345678899999999999999999999999999999999999999999876


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus       120 ~  120 (389)
T 3gni_B          120 H  120 (389)
T ss_dssp             T
T ss_pred             h
Confidence            5

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.47  E-value=1.1e-12  Score=68.52  Aligned_cols=78  Identities=22%  Similarity=0.276  Sum_probs=66.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+. ..++..+++|.+..........+..|+..+..+.|+|++++.+.+...+..++++|++++++|.+++...
T Consensus        35 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (295)
T 2clq_A           35 YGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK  113 (295)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHT
T ss_pred             cEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhh
Confidence            68999998 4578899999997655555667889999999999999999999999999999999999999999998764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.47  E-value=6e-13  Score=70.92  Aligned_cols=78  Identities=14%  Similarity=0.228  Sum_probs=66.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .++..+|+|.+...  .......+.+|+.+++.+.|+|++++++.+......++++|++++|+|.+++..
T Consensus        28 ~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~  107 (328)
T 3fe3_A           28 FAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA  107 (328)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHH
T ss_pred             CEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHH
Confidence            688999984 57999999998643  223345688999999999999999999999999999999999999999998865


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus       108 ~  108 (328)
T 3fe3_A          108 H  108 (328)
T ss_dssp             H
T ss_pred             c
Confidence            4

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.47  E-value=1.2e-12  Score=70.50  Aligned_cols=79  Identities=24%  Similarity=0.257  Sum_probs=66.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++.. .++..+|+|.+....  ......+.+|+.+++.+.|+|++++++.+...+..++++|++++|+|.+.+..
T Consensus        42 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~  121 (362)
T 2bdw_A           42 FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA  121 (362)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT
T ss_pred             CeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHH
Confidence            688999984 468899999997543  23345688999999999999999999999999999999999999999988875


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus       122 ~~  123 (362)
T 2bdw_A          122 RE  123 (362)
T ss_dssp             CS
T ss_pred             cC
Confidence            43

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.46  E-value=9.1e-13  Score=72.74  Aligned_cols=76  Identities=22%  Similarity=0.256  Sum_probs=65.9

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++....+..+|+|.++... ...+.+.+|+.+++.+.|+|++++++.+. .+..++++|++++|+|.+++...
T Consensus       201 fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~  276 (454)
T 1qcf_A          201 FGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSD  276 (454)
T ss_dssp             SEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSH
T ss_pred             ceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhc
Confidence            789999998778889999997543 45678999999999999999999998875 66789999999999999998753

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.46  E-value=1.5e-12  Score=68.70  Aligned_cols=78  Identities=22%  Similarity=0.166  Sum_probs=67.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhc-CCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+. ..++..+|+|.+..........+.+|+..+.. ..|+|++++++.+...+..++++|++++|+|.+++...
T Consensus        26 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  105 (316)
T 2ac3_A           26 HARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR  105 (316)
T ss_dssp             SEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHH
T ss_pred             eEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhcc
Confidence            68899998 44788999999976555556788899998887 47999999999999999999999999999999988754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.46  E-value=4.8e-13  Score=72.30  Aligned_cols=78  Identities=26%  Similarity=0.374  Sum_probs=66.0

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+... ++..+|+|.++.... .....+.+|+.+++.+.|+|++++++.+...+..++++|++++|+|.+++...
T Consensus       127 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  206 (377)
T 3cbl_A          127 FGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE  206 (377)
T ss_dssp             TEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHH
T ss_pred             CCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhc
Confidence            7899999964 788999999875422 22346788999999999999999999999889999999999999999998753

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.45  E-value=2.1e-12  Score=68.63  Aligned_cols=77  Identities=16%  Similarity=0.113  Sum_probs=66.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+++|.+.... .....+.+|+.++..+.|||++++.+.+...+..++++|++++|+|.+++...
T Consensus        18 ~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~   95 (321)
T 1tki_A           18 FGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTS   95 (321)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSS
T ss_pred             CeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhc
Confidence            788999984 468899999987432 34456889999999999999999999999999999999999999999998754

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.44  E-value=1.3e-12  Score=67.44  Aligned_cols=79  Identities=24%  Similarity=0.370  Sum_probs=65.8

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeC--CceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--PERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++... +..+|+|.+....  ......+.+|+..+..+.|+|++++.+.+..+  ...++++|++++|+|.+++.
T Consensus        23 ~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  101 (271)
T 3kmu_A           23 SGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLH  101 (271)
T ss_dssp             TEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHH
T ss_pred             cceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHh
Confidence            6889999864 7889999997543  23345788999999999999999999998776  77899999999999999998


Q ss_pred             cCCC
Q 038959           77 GRSF   80 (86)
Q Consensus        77 ~~~~   80 (86)
                      ....
T Consensus       102 ~~~~  105 (271)
T 3kmu_A          102 EGTN  105 (271)
T ss_dssp             SCSS
T ss_pred             hccc
Confidence            7543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.44  E-value=1.4e-12  Score=71.94  Aligned_cols=76  Identities=26%  Similarity=0.407  Sum_probs=64.3

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCC-ceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP-ERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.+.+. +..+|+|.++...  ....+.+|+.+++.+.|+|++++++.+.... ..++++|++++|+|.+++....
T Consensus       206 fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~  282 (450)
T 1k9a_A          206 FGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG  282 (450)
T ss_dssp             SEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHC
T ss_pred             CeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcC
Confidence            7889999864 6789999997543  4467899999999999999999999876554 7899999999999999998643

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.44  E-value=1.6e-12  Score=67.47  Aligned_cols=78  Identities=18%  Similarity=0.158  Sum_probs=67.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+++|.+..........+.+|+..+..+.|+|++++.+.+......++++|++++++|.+++...
T Consensus        22 ~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  100 (277)
T 3f3z_A           22 WGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK  100 (277)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH
T ss_pred             CEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHc
Confidence            688999984 467889999987544455678899999999999999999999999999999999999999999887654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.44  E-value=2.7e-12  Score=66.84  Aligned_cols=76  Identities=24%  Similarity=0.285  Sum_probs=66.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+....+..+|+|.+.... .....+.+|+..+..+.|+|++++++.+......++++|++++++|.+++..
T Consensus        37 ~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (283)
T 3gen_A           37 FGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE  112 (283)
T ss_dssp             CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHC
T ss_pred             CceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHH
Confidence            688999987777789999997543 3446788999999999999999999999989999999999999999999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.43  E-value=2e-12  Score=66.82  Aligned_cols=77  Identities=22%  Similarity=0.247  Sum_probs=66.6

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+....+..+|+|.+.... .....+.+|+..+..+.|+|++++.+.+......++++|++++++|.+++...
T Consensus        21 ~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   97 (268)
T 3sxs_A           21 FGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSH   97 (268)
T ss_dssp             TEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHH
T ss_pred             CceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHc
Confidence            688999987777789999997543 34467889999999999999999999999899999999999999999988653

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.43  E-value=1.2e-12  Score=70.66  Aligned_cols=79  Identities=16%  Similarity=0.322  Sum_probs=65.5

Q ss_pred             CCceEEEEc--------CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKL--------PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~--------~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      ||.||.+..        ..+..+|+|.++... ......+.+|+.++..+ .|+|++++++.+...+..++++|++++|+
T Consensus        94 fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~  173 (370)
T 2psq_A           94 FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN  173 (370)
T ss_dssp             SSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             CeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCC
Confidence            789999973        134579999997543 23345788999999999 89999999999999999999999999999


Q ss_pred             hhhhhccCC
Q 038959           71 LDFFIFGRS   79 (86)
Q Consensus        71 l~~~l~~~~   79 (86)
                      |.+++....
T Consensus       174 L~~~l~~~~  182 (370)
T 2psq_A          174 LREYLRARR  182 (370)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHhhC
Confidence            999998654

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.43  E-value=2.3e-12  Score=68.46  Aligned_cols=78  Identities=31%  Similarity=0.463  Sum_probs=65.1

Q ss_pred             CCceEEEEcC-C---CCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-D---GQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~---~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+... +   +..+|+|.+... .......+.+|+.++..+.|+|++++++.+......++++|++++|+|.+++
T Consensus        62 ~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l  141 (325)
T 3kul_A           62 SGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL  141 (325)
T ss_dssp             TEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHH
T ss_pred             CcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHH
Confidence            6889999853 2   345999999754 3334457889999999999999999999998888999999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       142 ~~~  144 (325)
T 3kul_A          142 RTH  144 (325)
T ss_dssp             HTT
T ss_pred             Hhc
Confidence            654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.43  E-value=3.1e-12  Score=68.61  Aligned_cols=77  Identities=26%  Similarity=0.245  Sum_probs=64.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC-----CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR-----TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.. .++..+|+|.++..     .......+.+|+.++..++|+|++++++.+...+..++++|++++|+|.+.
T Consensus        37 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~  116 (351)
T 3c0i_A           37 FSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE  116 (351)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHH
T ss_pred             CEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHH
Confidence            688999984 57899999998521     122456788999999999999999999999999999999999999999877


Q ss_pred             hcc
Q 038959           75 IFG   77 (86)
Q Consensus        75 l~~   77 (86)
                      +..
T Consensus       117 l~~  119 (351)
T 3c0i_A          117 IVK  119 (351)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.43  E-value=1.7e-12  Score=71.65  Aligned_cols=75  Identities=27%  Similarity=0.307  Sum_probs=64.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++....+..+|+|.++... ...+.+.+|+.+++.+.|+|++++++.+.. +..++++|++++|+|.+++..
T Consensus       197 fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~  271 (452)
T 1fmk_A          197 FGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG  271 (452)
T ss_dssp             SCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSH
T ss_pred             CeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHh
Confidence            789999997767789999997543 345678999999999999999999998865 678999999999999999874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.43  E-value=1.4e-12  Score=70.41  Aligned_cols=74  Identities=14%  Similarity=0.156  Sum_probs=62.4

Q ss_pred             CCceEEEEc----CCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL----PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++..    .++..+|+|.+...  .....+.+|+.++..+ +|+|++++++.+...+.+++++||+++|+|.+++
T Consensus        34 fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~  111 (361)
T 4f9c_A           34 FSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL  111 (361)
T ss_dssp             SEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHH
T ss_pred             CcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHH
Confidence            789999973    24678999998643  3345678899999887 6999999999999999999999999999999988


Q ss_pred             c
Q 038959           76 F   76 (86)
Q Consensus        76 ~   76 (86)
                      .
T Consensus       112 ~  112 (361)
T 4f9c_A          112 N  112 (361)
T ss_dssp             T
T ss_pred             c
Confidence            5

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.42  E-value=9.1e-13  Score=69.80  Aligned_cols=79  Identities=34%  Similarity=0.596  Sum_probs=65.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||++...++..+|+|.+..... .....+.+|+..+..+.|+|++++.+.+..+...++++|++++|+|.+++....
T Consensus        43 ~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  122 (326)
T 3uim_A           43 FGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP  122 (326)
T ss_dssp             SSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCS
T ss_pred             CcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhcc
Confidence            6899999876788999999874322 122267889999999999999999999999999999999999999999998654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.42  E-value=1.2e-12  Score=68.20  Aligned_cols=79  Identities=25%  Similarity=0.315  Sum_probs=66.7

Q ss_pred             CCceEEEEcC-CC-------CEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP-DG-------QVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~-~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++... ++       ..+++|.+..........+.+|+..+..+.|+|++++++.+...+..++++|++++|+|.
T Consensus        21 ~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  100 (289)
T 4fvq_A           21 FTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLD  100 (289)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHH
T ss_pred             CceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHH
Confidence            6889999743 33       468999987555556678899999999999999999999999899999999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++....
T Consensus       101 ~~l~~~~  107 (289)
T 4fvq_A          101 TYLKKNK  107 (289)
T ss_dssp             HHHHHTG
T ss_pred             HHHHhCC
Confidence            9987643

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.42  E-value=2.1e-12  Score=69.53  Aligned_cols=77  Identities=17%  Similarity=0.060  Sum_probs=65.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+|+|.+.... .....+.+|+..++.+.|+|++++++.+..+...++++|++++|+|..++...
T Consensus        33 ~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  110 (361)
T 3uc3_A           33 FGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNA  110 (361)
T ss_dssp             TSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH
T ss_pred             CEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhc
Confidence            789999984 478999999997533 22356788999999999999999999999999999999999999999988653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.42  E-value=3.7e-12  Score=65.74  Aligned_cols=77  Identities=25%  Similarity=0.315  Sum_probs=67.0

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+....+..+++|.+.... ...+.+.+|+..+..+.|+|++++++.+...+..++++|++++++|.+++...
T Consensus        21 ~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   97 (267)
T 3t9t_A           21 FGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ   97 (267)
T ss_dssp             TEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHT
T ss_pred             ceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhC
Confidence            688999987677889999997543 34467889999999999999999999998889999999999999999998764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.42  E-value=1.4e-12  Score=69.34  Aligned_cols=79  Identities=18%  Similarity=0.115  Sum_probs=64.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+|+|.+..... ...+.+.+|+.+++.+.|+|++++++.+...+..++++|++++|+|.+++...
T Consensus        20 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   99 (323)
T 3tki_A           20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD   99 (323)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTT
T ss_pred             CEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhc
Confidence            688999984 4788999999864332 22346788999999999999999999999999999999999999999998765


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus       100 ~  100 (323)
T 3tki_A          100 I  100 (323)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.42  E-value=1.8e-12  Score=69.09  Aligned_cols=76  Identities=18%  Similarity=0.135  Sum_probs=64.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC-----CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR-----TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+.. .++..+|+|.+...     .......+..|+.++..++|+|++++++.+...+..++++|++++|+|.++
T Consensus        39 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~  118 (345)
T 3hko_A           39 YGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDK  118 (345)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred             CeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHH
Confidence            688999984 56889999998532     234456788999999999999999999999999999999999999999998


Q ss_pred             hc
Q 038959           75 IF   76 (86)
Q Consensus        75 l~   76 (86)
                      +.
T Consensus       119 l~  120 (345)
T 3hko_A          119 LN  120 (345)
T ss_dssp             EE
T ss_pred             HH
Confidence            85

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.42  E-value=1.2e-12  Score=70.10  Aligned_cols=78  Identities=15%  Similarity=0.163  Sum_probs=65.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.++..   .......+..|..++..+.|||++++.+.+...+..++++|++++|+|..++.
T Consensus        18 fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~   97 (337)
T 1o6l_A           18 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS   97 (337)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHH
Confidence            788999984 47899999999632   12234567889999999999999999999999999999999999999998887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        98 ~~   99 (337)
T 1o6l_A           98 RE   99 (337)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.42  E-value=2.9e-12  Score=67.18  Aligned_cols=77  Identities=21%  Similarity=0.392  Sum_probs=64.2

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+... ++..+++|.+..........+..|+..+..+.|+|++++.+.+...+..++++|++++++|..++..
T Consensus        32 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  109 (302)
T 2j7t_A           32 FGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE  109 (302)
T ss_dssp             TCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHH
T ss_pred             CeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHh
Confidence            6899999954 6889999999765555667888999999999999999999999988999999999999999988764

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.41  E-value=6.3e-12  Score=69.80  Aligned_cols=79  Identities=24%  Similarity=0.146  Sum_probs=67.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+....   ......+.+|+.+++.+.|||++++++.+...+..++++|++.+|+|.+.+.
T Consensus        39 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  118 (484)
T 3nyv_A           39 FGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII  118 (484)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             CEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHH
Confidence            688999984 478999999986432   3346678999999999999999999999999999999999999999998887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       119 ~~~  121 (484)
T 3nyv_A          119 SRK  121 (484)
T ss_dssp             TCS
T ss_pred             hcC
Confidence            543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.41  E-value=3.6e-12  Score=67.01  Aligned_cols=78  Identities=24%  Similarity=0.201  Sum_probs=63.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+++|.++.........+.+|+..+..+.|+|++++.+.+......++++|++++++|.+++...
T Consensus        22 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  100 (304)
T 2jam_A           22 FSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER  100 (304)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHH
T ss_pred             CceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHc
Confidence            688999984 478899999997544344456889999999999999999999999999999999999999999887643

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.41  E-value=3.3e-12  Score=67.54  Aligned_cols=77  Identities=23%  Similarity=0.356  Sum_probs=65.4

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .+..+|+|.+.....  .....+.+|+.++..+.|+|++++.+.+...+..++++|++++|+|.+++...
T Consensus        50 ~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  128 (309)
T 3p86_A           50 FGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS  128 (309)
T ss_dssp             SEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHST
T ss_pred             CeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhc
Confidence            688999975 577899999875432  23346889999999999999999999999999999999999999999998754

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.41  E-value=5.3e-12  Score=66.25  Aligned_cols=78  Identities=19%  Similarity=0.217  Sum_probs=65.7

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+. ..++..+|+|.+....   ......+.+|+..+..+.|+|++++++.+...+..++++|++++++|.+++.
T Consensus        24 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~  103 (294)
T 4eqm_A           24 MSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE  103 (294)
T ss_dssp             TEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH
T ss_pred             CEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHH
Confidence            68899998 4478899999985432   2233568889999999999999999999999999999999999999999887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       104 ~~  105 (294)
T 4eqm_A          104 SH  105 (294)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.41  E-value=5.9e-12  Score=66.71  Aligned_cols=78  Identities=18%  Similarity=0.217  Sum_probs=66.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc------ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.. .++..+|+|.+.....      .....+.+|+..+..+.|+|++++++.+......++++|++++++|.+
T Consensus        25 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  104 (321)
T 2a2a_A           25 FAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD  104 (321)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             CEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHH
Confidence            688999984 4688999999964321      135678899999999999999999999999999999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus       105 ~l~~~  109 (321)
T 2a2a_A          105 FLAQK  109 (321)
T ss_dssp             HHHTC
T ss_pred             HHHhc
Confidence            98754

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.41  E-value=1.7e-12  Score=72.96  Aligned_cols=75  Identities=27%  Similarity=0.307  Sum_probs=64.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++.+..+..+|+|.++... ...+.+.+|+.+++.+.|+|++++++.+.. +..++++|++++|+|.+++..
T Consensus       280 fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~  354 (535)
T 2h8h_A          280 FGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG  354 (535)
T ss_dssp             SEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSH
T ss_pred             CeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhh
Confidence            789999997767789999997543 345678999999999999999999998865 678999999999999999874

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.41  E-value=4.6e-12  Score=72.26  Aligned_cols=77  Identities=29%  Similarity=0.352  Sum_probs=64.2

Q ss_pred             CCceEEEEcC---CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP---DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~---~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||+|.+.   .+..+|+|.++... ......+.+|+.++..++|+|++++++.+.. +..++++|++++|+|.+++.
T Consensus       349 fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~  427 (613)
T 2ozo_A          349 FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLV  427 (613)
T ss_dssp             SSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHT
T ss_pred             CcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHh
Confidence            7899999743   45579999997543 3356789999999999999999999998865 56899999999999999987


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       428 ~~  429 (613)
T 2ozo_A          428 GK  429 (613)
T ss_dssp             TC
T ss_pred             hc
Confidence            54

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.40  E-value=4.7e-12  Score=66.00  Aligned_cols=78  Identities=27%  Similarity=0.366  Sum_probs=67.0

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.+... ++..+++|.+.... .....+.+|+..++.+.|+|++++.+.+......++++|++++++|.+++....
T Consensus        26 ~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~  104 (288)
T 3kfa_A           26 YGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN  104 (288)
T ss_dssp             TCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCC
T ss_pred             ceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcc
Confidence            6899999854 58889999987532 345678899999999999999999999998999999999999999999997643

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.40  E-value=3.1e-12  Score=68.08  Aligned_cols=78  Identities=27%  Similarity=0.421  Sum_probs=65.7

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++...      ++..+|+|.++... ......+.+|+.++..+.|+|++++++.+......++++|++++|+|.+
T Consensus        60 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  139 (343)
T 1luf_A           60 FGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE  139 (343)
T ss_dssp             SCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred             CeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHH
Confidence            6889999853      34789999997543 2334578899999999999999999999998999999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus       140 ~l~~~  144 (343)
T 1luf_A          140 FLRSM  144 (343)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            99764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.40  E-value=2.5e-12  Score=68.33  Aligned_cols=79  Identities=13%  Similarity=0.167  Sum_probs=66.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.++..   .......+..|..++..+.|+|++++++.+......++++|++++|+|.+++.
T Consensus        19 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~   98 (318)
T 1fot_A           19 FGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR   98 (318)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHH
Confidence            789999984 47899999998632   11334567788899999999999999999999999999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        99 ~~~  101 (318)
T 1fot_A           99 KSQ  101 (318)
T ss_dssp             HTS
T ss_pred             HcC
Confidence            643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.40  E-value=4.9e-12  Score=70.59  Aligned_cols=78  Identities=23%  Similarity=0.140  Sum_probs=65.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc-------------ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEecc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS-------------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM   66 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~   66 (86)
                      ||.||.+.. .++..+|+|.+.....             .....+.+|+.+++.+.|||++++++.+......++++|++
T Consensus        49 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~  128 (504)
T 3q5i_A           49 YGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFY  128 (504)
T ss_dssp             CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecC
Confidence            789999984 4688999999864321             23457889999999999999999999999999999999999


Q ss_pred             CCCChhhhhccC
Q 038959           67 PNKSLDFFIFGR   78 (86)
Q Consensus        67 ~~g~l~~~l~~~   78 (86)
                      ++|+|.+.+...
T Consensus       129 ~gg~L~~~l~~~  140 (504)
T 3q5i_A          129 EGGELFEQIINR  140 (504)
T ss_dssp             TTCBHHHHHHHH
T ss_pred             CCCcHHHHHHHc
Confidence            999999887653

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.40  E-value=5.9e-12  Score=66.96  Aligned_cols=76  Identities=22%  Similarity=0.107  Sum_probs=64.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+|+|.+..   ........|+..+..+. |+|++++++.+......++++|++++|+|.+++...
T Consensus        24 ~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  100 (325)
T 3kn6_A           24 FSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK  100 (325)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHC
T ss_pred             CeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhc
Confidence            788999984 4689999999853   23456778888888886 999999999999999999999999999999998765


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus       101 ~  101 (325)
T 3kn6_A          101 K  101 (325)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.39  E-value=2.3e-12  Score=71.13  Aligned_cols=79  Identities=20%  Similarity=0.205  Sum_probs=66.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++. ..++..+|+|.+.....  .....+.+|+.+++.++|||++++++.+...+..++++|++++|+|.+.+..
T Consensus        24 fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~  103 (444)
T 3soa_A           24 FSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA  103 (444)
T ss_dssp             -CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHH
T ss_pred             CeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHH
Confidence            78999998 45788999999975432  2345688999999999999999999999999999999999999999988875


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus       104 ~~  105 (444)
T 3soa_A          104 RE  105 (444)
T ss_dssp             CS
T ss_pred             cC
Confidence            43

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.39  E-value=2.7e-12  Score=71.43  Aligned_cols=79  Identities=19%  Similarity=0.235  Sum_probs=66.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+....   ......+.+|+.+++.+.|+|++++++.+......++++|++++|+|.+++.
T Consensus        29 fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~  108 (476)
T 2y94_A           29 FGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC  108 (476)
T ss_dssp             SSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTT
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHH
Confidence            789999984 479999999986321   1234568899999999999999999999999999999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       109 ~~~  111 (476)
T 2y94_A          109 KNG  111 (476)
T ss_dssp             SSS
T ss_pred             hcC
Confidence            543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.39  E-value=5.5e-12  Score=67.68  Aligned_cols=78  Identities=22%  Similarity=0.210  Sum_probs=66.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+|+|.+... .......+.+|+.++..+.|+|++++++.+...+..++++|++++++|.+++...
T Consensus        46 ~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  125 (360)
T 3eqc_A           46 GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA  125 (360)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHH
T ss_pred             CeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHc
Confidence            689999984 47889999999754 2333457889999999999999999999999999999999999999999988754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.39  E-value=8.5e-12  Score=65.15  Aligned_cols=77  Identities=14%  Similarity=0.107  Sum_probs=65.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++.. .++..+++|.+... .......+.+|+..++.+.|+|++++.+.+......++++|++++|+|.+++..
T Consensus        35 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  113 (285)
T 3is5_A           35 FGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVS  113 (285)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHH
T ss_pred             CeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHh
Confidence            689999984 46889999998643 233456788999999999999999999999999999999999999999988753

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.39  E-value=2.4e-12  Score=69.01  Aligned_cols=77  Identities=22%  Similarity=0.158  Sum_probs=59.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||.+... ++..+|+|.+....  ....+.+|+.++..+.|+|++++.+.+..+...++++|++++|+|.+++....
T Consensus        66 ~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  143 (349)
T 2w4o_A           66 TSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG  143 (349)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCS
T ss_pred             CEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcC
Confidence            6889999854 68899999997432  33467789999999999999999999999999999999999999999887653

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.39  E-value=6.5e-12  Score=69.98  Aligned_cols=78  Identities=19%  Similarity=0.103  Sum_probs=63.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++.. .++..+|+|.+....  ......+.+|+.+++.+.|||++++++.+......++++|++++|+|.+.+..
T Consensus        50 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~  129 (494)
T 3lij_A           50 YGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH  129 (494)
T ss_dssp             --EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH
T ss_pred             CEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHH
Confidence            689999984 478899999997432  23345788999999999999999999999999999999999999999887764


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus       130 ~  130 (494)
T 3lij_A          130 R  130 (494)
T ss_dssp             H
T ss_pred             c
Confidence            3

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.39  E-value=6.5e-12  Score=66.44  Aligned_cols=78  Identities=23%  Similarity=0.351  Sum_probs=64.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC--ceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP--ERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.+.... ......+.+|+.+++.+.|+|++++.+.+....  ..++++|++++|+|.+++.
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  101 (319)
T 4euu_A           22 TANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE  101 (319)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHH
T ss_pred             CeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHH
Confidence            688999984 468999999997432 234556789999999999999999999886544  7899999999999999987


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       102 ~~  103 (319)
T 4euu_A          102 EP  103 (319)
T ss_dssp             SG
T ss_pred             Hh
Confidence            64

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.39  E-value=3.1e-12  Score=66.97  Aligned_cols=78  Identities=27%  Similarity=0.420  Sum_probs=65.0

Q ss_pred             CCceEEEEc-----CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-----PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.+     .++..+|+|.+..........+.+|+.++..+.|+|++++.+.+..  ....++++|++++|+|.+
T Consensus        23 ~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~  102 (295)
T 3ugc_A           23 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD  102 (295)
T ss_dssp             SEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHH
T ss_pred             CEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHH
Confidence            688999973     2577899999986555555678899999999999999999998754  456899999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus       103 ~l~~~  107 (295)
T 3ugc_A          103 YLQKH  107 (295)
T ss_dssp             HHHHC
T ss_pred             HHHhc
Confidence            98754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.39  E-value=6.4e-12  Score=66.16  Aligned_cols=79  Identities=18%  Similarity=0.274  Sum_probs=65.7

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+..      .++..+|+|.+.... ......+.+|+..++.+.|+|++++++.+...+..++++|++++|+|.+
T Consensus        36 ~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  115 (314)
T 2ivs_A           36 FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG  115 (314)
T ss_dssp             SSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred             CeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHH
Confidence            688999973      234689999997543 2334578899999999999999999999998999999999999999999


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++....
T Consensus       116 ~l~~~~  121 (314)
T 2ivs_A          116 FLRESR  121 (314)
T ss_dssp             HHHHTT
T ss_pred             HHHHHh
Confidence            998653

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.38  E-value=1.5e-11  Score=64.62  Aligned_cols=78  Identities=14%  Similarity=0.206  Sum_probs=66.9

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+. ..++..+++|.+.... ......+.+|+..+..+.|+|++++++.+......++++|++++++|.+++...
T Consensus        35 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  114 (303)
T 3a7i_A           35 FGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG  114 (303)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTS
T ss_pred             CeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcC
Confidence            68999998 4578899999997443 334567889999999999999999999999999999999999999999988754

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.38  E-value=4.8e-12  Score=67.99  Aligned_cols=78  Identities=15%  Similarity=0.109  Sum_probs=65.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.++...   ......+.+|..++..+.|+|++++.+.+......++++|++++|+|.+++.
T Consensus        54 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~  133 (350)
T 1rdq_E           54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR  133 (350)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH
T ss_pred             CcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHH
Confidence            789999984 478999999985321   1334567889999999999999999999999999999999999999999987


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       134 ~~  135 (350)
T 1rdq_E          134 RI  135 (350)
T ss_dssp             HH
T ss_pred             Hc
Confidence            53

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.37  E-value=1.2e-11  Score=64.24  Aligned_cols=77  Identities=22%  Similarity=0.141  Sum_probs=65.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+++|.+....  ......+.+++..+..+ .|+|++++++.+...+..++++|++++++|.+++.
T Consensus        24 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  103 (289)
T 1x8b_A           24 FGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAIS  103 (289)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH
T ss_pred             ceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHH
Confidence            688999985 478999999997532  23345678888888887 89999999999999999999999999999999987


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus       104 ~  104 (289)
T 1x8b_A          104 E  104 (289)
T ss_dssp             H
T ss_pred             h
Confidence            5

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.37  E-value=1.5e-11  Score=63.71  Aligned_cols=78  Identities=18%  Similarity=0.119  Sum_probs=66.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+++|.++.. .......+.+|+..++.+.|+|++++.+.+...+..++++|++++++|.+++...
T Consensus        20 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   99 (276)
T 2yex_A           20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD   99 (276)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTT
T ss_pred             CcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhc
Confidence            688999985 47889999998633 2234467889999999999999999999999999999999999999999988754

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.37  E-value=4.6e-12  Score=68.91  Aligned_cols=79  Identities=10%  Similarity=0.122  Sum_probs=66.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+...   .......+.+|+.++..+.|+|++++++.+......++++|++++|+|..++.
T Consensus        28 fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~  107 (384)
T 4fr4_A           28 FGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ  107 (384)
T ss_dssp             TCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHH
Confidence            789999984 46889999998532   12234567889999999999999999999999999999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       108 ~~~  110 (384)
T 4fr4_A          108 QNV  110 (384)
T ss_dssp             TTC
T ss_pred             hcC
Confidence            653

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.37  E-value=2.1e-11  Score=64.25  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=64.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.+....   ......+.+|+..+..+.|+|++++.+.+...+..++++|++++++|.+++.
T Consensus        45 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  124 (310)
T 2wqm_A           45 FSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIK  124 (310)
T ss_dssp             -CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHH
T ss_pred             CceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHH
Confidence            688999984 578899999997432   2334568899999999999999999999999999999999999999999886


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus       125 ~  125 (310)
T 2wqm_A          125 H  125 (310)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.37  E-value=5.4e-12  Score=68.09  Aligned_cols=78  Identities=32%  Similarity=0.442  Sum_probs=65.1

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++.+.      .+..+|+|.++.. .......+.+|+.++..+.|+|++++++.+......++++|++++|+|.+
T Consensus        84 fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~  163 (367)
T 3l9p_A           84 FGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS  163 (367)
T ss_dssp             SSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHH
T ss_pred             CEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHH
Confidence            7899999832      3568999999643 23334468889999999999999999999998889999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus       164 ~l~~~  168 (367)
T 3l9p_A          164 FLRET  168 (367)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            98754

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.36  E-value=1.7e-11  Score=63.82  Aligned_cols=78  Identities=18%  Similarity=0.231  Sum_probs=66.1

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC------cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT------SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+... ++..+++|.+....      ......+.+|+..+..+.|+|++++.+.+......++++|++++++|.+
T Consensus        18 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   97 (283)
T 3bhy_A           18 FAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD   97 (283)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             ceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHH
Confidence            6889999854 68899999986332      1235678899999999999999999999999999999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus        98 ~l~~~  102 (283)
T 3bhy_A           98 FLAEK  102 (283)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            88653

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.36  E-value=4.2e-12  Score=70.59  Aligned_cols=78  Identities=22%  Similarity=0.161  Sum_probs=66.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++.. .++..+|+|.+...  .......+.+|+.+++.+.|||++++++.+......++++|++++|+|.+.+..
T Consensus        35 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  114 (486)
T 3mwu_A           35 FGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK  114 (486)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             CEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHh
Confidence            789999984 47889999998532  223456788999999999999999999999999999999999999999887764


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus       115 ~  115 (486)
T 3mwu_A          115 R  115 (486)
T ss_dssp             H
T ss_pred             c
Confidence            3

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.36  E-value=5.5e-12  Score=67.10  Aligned_cols=78  Identities=21%  Similarity=0.262  Sum_probs=60.1

Q ss_pred             CCceEEEEc----CCCCEEEEEEecCCC----cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL----PDGQVIAVKRLSGRT----SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~----~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+..    .++..+|+|.++...    ......+..|+.++..+.|+|++++++.+...+..++++|++++|+|.
T Consensus        30 ~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~  109 (327)
T 3a62_A           30 YGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF  109 (327)
T ss_dssp             TEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHH
T ss_pred             CEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHH
Confidence            688999884    468899999997532    123345778999999999999999999999999999999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++...
T Consensus       110 ~~l~~~  115 (327)
T 3a62_A          110 MQLERE  115 (327)
T ss_dssp             HHHHHH
T ss_pred             HHHHhC
Confidence            888653

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.36  E-value=1.2e-11  Score=65.63  Aligned_cols=78  Identities=27%  Similarity=0.426  Sum_probs=64.2

Q ss_pred             CCceEEEEc-----CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeC--CceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-----PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--PERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.+     .++..+|+|.+..........+.+|+..+..+.|+|++++.+.+...  ...++++|++++++|.+
T Consensus        54 ~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~  133 (326)
T 2w1i_A           54 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD  133 (326)
T ss_dssp             SEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHH
T ss_pred             CeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHH
Confidence            688999973     25789999999865545556789999999999999999999987654  37899999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus       134 ~l~~~  138 (326)
T 2w1i_A          134 YLQKH  138 (326)
T ss_dssp             HHHHS
T ss_pred             HHHhc
Confidence            98765

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.35  E-value=1e-11  Score=66.06  Aligned_cols=79  Identities=16%  Similarity=0.322  Sum_probs=64.4

Q ss_pred             CCceEEEEc--------CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKL--------PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~--------~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      ||.||.+..        ..+..+|+|.++... ......+.+|+..+..+ .|+|++++.+.+...+..++++|++++|+
T Consensus        48 ~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~  127 (334)
T 2pvf_A           48 FGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN  127 (334)
T ss_dssp             SCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCB
T ss_pred             ceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCc
Confidence            789999974        246689999997543 23345688899999998 89999999999998999999999999999


Q ss_pred             hhhhhccCC
Q 038959           71 LDFFIFGRS   79 (86)
Q Consensus        71 l~~~l~~~~   79 (86)
                      |.+++....
T Consensus       128 L~~~l~~~~  136 (334)
T 2pvf_A          128 LREYLRARR  136 (334)
T ss_dssp             HHHHHHTTS
T ss_pred             HHHHHHHhc
Confidence            999998654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.35  E-value=8.5e-13  Score=72.24  Aligned_cols=79  Identities=19%  Similarity=0.131  Sum_probs=64.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+....   ......+..|..++..++|+|++++++.+.....+++++||+++|+|..++.
T Consensus        82 fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~  161 (410)
T 3v8s_A           82 FGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS  161 (410)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             CEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHH
Confidence            789999984 468899999985311   1112246788888999999999999999999999999999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       162 ~~~  164 (410)
T 3v8s_A          162 NYD  164 (410)
T ss_dssp             HCC
T ss_pred             cCC
Confidence            654

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.35  E-value=1.5e-11  Score=65.08  Aligned_cols=76  Identities=22%  Similarity=0.287  Sum_probs=63.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .++..+|+|.++... ......+.+|+.+++.+.|+|++++++.+...+..++++|+++ |+|.+++..
T Consensus        18 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~   95 (317)
T 2pmi_A           18 YATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDS   95 (317)
T ss_dssp             -CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHH
T ss_pred             CEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHh
Confidence            689999984 468899999997432 2334577889999999999999999999999999999999998 588888764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.35  E-value=1.9e-11  Score=64.92  Aligned_cols=77  Identities=23%  Similarity=0.313  Sum_probs=64.5

Q ss_pred             CCceEEEEc-----CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeee--eCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-----PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSL--HGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.+     ..+..+++|.+..........+.+|+.++..+.|+|++.+.+.+.  .....++++|++++++|.+
T Consensus        36 ~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~  115 (327)
T 3lxl_A           36 FGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD  115 (327)
T ss_dssp             TEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHH
T ss_pred             CeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHH
Confidence            688999973     357789999998655555567899999999999999999998875  4566889999999999999


Q ss_pred             hhcc
Q 038959           74 FIFG   77 (86)
Q Consensus        74 ~l~~   77 (86)
                      ++..
T Consensus       116 ~l~~  119 (327)
T 3lxl_A          116 FLQR  119 (327)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8865

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.35  E-value=8.5e-12  Score=70.83  Aligned_cols=79  Identities=20%  Similarity=0.248  Sum_probs=66.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+...   .......+.+|..++..+.|+|++++++.+......++++|++++|+|..++.
T Consensus       197 fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~  276 (576)
T 2acx_A          197 FGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY  276 (576)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             CEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHH
Confidence            789999984 47999999998532   11234567889999999999999999999999999999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       277 ~~~  279 (576)
T 2acx_A          277 HMG  279 (576)
T ss_dssp             SSS
T ss_pred             hcC
Confidence            643

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.35  E-value=7.2e-12  Score=66.12  Aligned_cols=77  Identities=27%  Similarity=0.190  Sum_probs=64.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeee----eCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSL----HGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.+..........+.+|+..+..+.|+|++++++.+.    .....++++|++++|+|.+++
T Consensus        42 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l  121 (317)
T 2buj_A           42 FSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI  121 (317)
T ss_dssp             CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHH
T ss_pred             CeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHH
Confidence            688999984 578999999986544455567889999999999999999999875    234688999999999999988


Q ss_pred             cc
Q 038959           76 FG   77 (86)
Q Consensus        76 ~~   77 (86)
                      ..
T Consensus       122 ~~  123 (317)
T 2buj_A          122 ER  123 (317)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.34  E-value=2e-12  Score=71.28  Aligned_cols=77  Identities=18%  Similarity=0.129  Sum_probs=63.4

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+... ++..+|+|.++...   ......+..|..++..++|+|++++++.+...+.+++++||+++|+|..++.
T Consensus        87 fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~  166 (437)
T 4aw2_A           87 FGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLS  166 (437)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHH
T ss_pred             CEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHH
Confidence            7899999954 67889999985311   1111236778888888999999999999999999999999999999999997


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus       167 ~  167 (437)
T 4aw2_A          167 K  167 (437)
T ss_dssp             T
T ss_pred             H
Confidence            6

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.34  E-value=1e-11  Score=67.57  Aligned_cols=78  Identities=23%  Similarity=0.351  Sum_probs=64.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC--ceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP--ERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+.... ......+.+|+.++..+.|+|++++++.+....  ..++++|++++|+|.+++.
T Consensus        22 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  101 (396)
T 4eut_A           22 TANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE  101 (396)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTT
T ss_pred             CeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHH
Confidence            688999985 468999999997432 233556788999999999999999999887644  7899999999999999987


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       102 ~~  103 (396)
T 4eut_A          102 EP  103 (396)
T ss_dssp             SG
T ss_pred             hh
Confidence            54

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.34  E-value=5.3e-12  Score=67.92  Aligned_cols=78  Identities=19%  Similarity=0.291  Sum_probs=64.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.++..   .......+..|..++..+ .|+|++++++.+.....+++++|++++|+|..++
T Consensus        36 fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l  115 (353)
T 3txo_A           36 FGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI  115 (353)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHH
T ss_pred             CEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHH
Confidence            789999984 46899999998632   122344567788888876 7999999999999999999999999999999988


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       116 ~~~  118 (353)
T 3txo_A          116 QKS  118 (353)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            754

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.34  E-value=2.6e-11  Score=63.03  Aligned_cols=76  Identities=25%  Similarity=0.259  Sum_probs=63.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+....+..+++|.+.... .....+.+|+..+..+.|+|++++++.+. .+..++++|++++++|.+++...
T Consensus        26 ~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~  101 (279)
T 1qpc_A           26 FGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTP  101 (279)
T ss_dssp             TEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSH
T ss_pred             CeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhcC
Confidence            688999987777789999987543 34567889999999999999999998875 45688999999999999998753

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.33  E-value=2.3e-11  Score=63.81  Aligned_cols=77  Identities=25%  Similarity=0.354  Sum_probs=61.6

Q ss_pred             CCceEEEEc-----CCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeC--CceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-----PDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG--PERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.+     ..+..+|+|.+... .......+.+|+..+..+.|+|++++.+.+...  ...++++|++++|+|.
T Consensus        34 ~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~  113 (302)
T 4e5w_A           34 FGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLK  113 (302)
T ss_dssp             SEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHH
T ss_pred             ceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHH
Confidence            688999973     35789999999743 233456788999999999999999999988765  6689999999999999


Q ss_pred             hhhcc
Q 038959           73 FFIFG   77 (86)
Q Consensus        73 ~~l~~   77 (86)
                      +++..
T Consensus       114 ~~l~~  118 (302)
T 4e5w_A          114 EYLPK  118 (302)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99854

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.33  E-value=7.1e-12  Score=66.82  Aligned_cols=79  Identities=20%  Similarity=0.258  Sum_probs=63.5

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+..      ..+..+|+|.+.... ......+.+|+.++..+ .|+|++++.+.+...+..++++|++++|+|.
T Consensus        58 ~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~  137 (344)
T 1rjb_A           58 FGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL  137 (344)
T ss_dssp             SEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred             CceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHH
Confidence            688999884      134579999997432 23345788999999998 8999999999999999999999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++....
T Consensus       138 ~~l~~~~  144 (344)
T 1rjb_A          138 NYLRSKR  144 (344)
T ss_dssp             HHHHTTT
T ss_pred             HHHhhcc
Confidence            9998653

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.33  E-value=2.3e-11  Score=64.31  Aligned_cols=77  Identities=23%  Similarity=0.261  Sum_probs=62.6

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++....+..+|+|.+....  ......+.+|+.+++.+.|+|++++++.+......++++|++++ ++.+.+...
T Consensus        34 ~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~  112 (311)
T 3niz_A           34 YGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDEN  112 (311)
T ss_dssp             SCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTC
T ss_pred             CeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhc
Confidence            789999997778999999996432  22345688999999999999999999999999999999999975 777776654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.33  E-value=1.6e-11  Score=65.91  Aligned_cols=78  Identities=19%  Similarity=0.273  Sum_probs=64.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.+....   ......+..|..++..+ .|+|++++++.+......++++|++++|+|..++
T Consensus        22 fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l  101 (345)
T 3a8x_A           22 YAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM  101 (345)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHH
Confidence            688999985 468899999997432   22234577888888876 8999999999999999999999999999999988


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       102 ~~~  104 (345)
T 3a8x_A          102 QRQ  104 (345)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            753

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.33  E-value=6.9e-12  Score=66.00  Aligned_cols=79  Identities=22%  Similarity=0.265  Sum_probs=65.8

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+..      .++..+++|.+..... .....+.+|+..+..+ .|+|++++.+.+...+..++++|++++|+|.
T Consensus        36 ~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  115 (313)
T 1t46_A           36 FGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL  115 (313)
T ss_dssp             SEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHH
T ss_pred             CcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHH
Confidence            688999873      2466899999975432 3345788999999998 8999999999999999999999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++....
T Consensus       116 ~~l~~~~  122 (313)
T 1t46_A          116 NFLRRKR  122 (313)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhcc
Confidence            9997654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.33  E-value=1.1e-11  Score=65.75  Aligned_cols=77  Identities=21%  Similarity=0.264  Sum_probs=61.1

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCC----ceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP----ERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++... +..+|+|.+.... ........|+..+..+.|+|++++++.+....    ..++++|++++|+|.+++.
T Consensus        37 ~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  114 (322)
T 3soc_A           37 FGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK  114 (322)
T ss_dssp             TCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHH
T ss_pred             ceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHH
Confidence            7899999864 7889999986422 22334566888888999999999999987644    3689999999999999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       115 ~~~  117 (322)
T 3soc_A          115 ANV  117 (322)
T ss_dssp             HCC
T ss_pred             hcC
Confidence            643

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.33  E-value=1.7e-11  Score=64.26  Aligned_cols=77  Identities=18%  Similarity=0.132  Sum_probs=60.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc--------------------------cHHHHHHHHHHHhcCCCCcccceeeee
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ--------------------------GIVEFKNEAKVIAKPQHTNIVRLIGCS   53 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~   53 (86)
                      ||.||.+.. .++..+|+|.+......                          ..+.+.+|+.+++.+.|+|++++.+.+
T Consensus        26 ~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  105 (298)
T 2zv2_A           26 YGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVL  105 (298)
T ss_dssp             CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            789999984 46889999998643211                          123578899999999999999999998


Q ss_pred             ee--CCceEEEEeccCCCChhhhhcc
Q 038959           54 LH--GPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus        54 ~~--~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ..  ....++++|++++++|.+++..
T Consensus       106 ~~~~~~~~~lv~e~~~~~~l~~~~~~  131 (298)
T 2zv2_A          106 DDPNEDHLYMVFELVNQGPVMEVPTL  131 (298)
T ss_dssp             ECSSSSEEEEEEECCTTCBSCCSSCS
T ss_pred             EcCCCCEEEEEEecCCCCcHHHHhhc
Confidence            75  5678999999999998876544

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.33  E-value=3.6e-11  Score=63.67  Aligned_cols=79  Identities=24%  Similarity=0.329  Sum_probs=64.1

Q ss_pred             CCceEEEEcC-----CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP-----DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~-----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.+.     ++..+|+|.+.... ......+.+|+.+++.+.|+|++++.+.+..  ....++++|++++|+|.
T Consensus        44 ~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~  123 (318)
T 3lxp_A           44 FGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR  123 (318)
T ss_dssp             SEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHH
T ss_pred             CeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHH
Confidence            6889877532     57789999997543 2334578899999999999999999999876  46788999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++....
T Consensus       124 ~~l~~~~  130 (318)
T 3lxp_A          124 DYLPRHS  130 (318)
T ss_dssp             HHGGGSC
T ss_pred             HHHhhCC
Confidence            9987654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.32  E-value=5.7e-12  Score=67.46  Aligned_cols=79  Identities=18%  Similarity=0.286  Sum_probs=63.4

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcC-CCCcccceeeeeeeCC-ceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGP-ERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~-~~~l~~e~~~~g~l   71 (86)
                      ||.||++.+      .++..+|+|.++.... .....+.+|+.++..+ +|+|++++++.+...+ ..++++|++++|+|
T Consensus        35 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L  114 (359)
T 3vhe_A           35 FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL  114 (359)
T ss_dssp             SEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEH
T ss_pred             CceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcH
Confidence            688999972      2457899999975432 3345688999999998 7899999999987654 48999999999999


Q ss_pred             hhhhccCC
Q 038959           72 DFFIFGRS   79 (86)
Q Consensus        72 ~~~l~~~~   79 (86)
                      .+++....
T Consensus       115 ~~~l~~~~  122 (359)
T 3vhe_A          115 STYLRSKR  122 (359)
T ss_dssp             HHHHHTTT
T ss_pred             HHHHHhcc
Confidence            99998654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.32  E-value=2.4e-12  Score=70.92  Aligned_cols=78  Identities=17%  Similarity=0.161  Sum_probs=57.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+. ..++..+|+|.+...   .......+..|+.+++.+.|+|++.+.+.+...+.+++++|++++|+|..++.
T Consensus       161 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~  240 (446)
T 4ejn_A          161 FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS  240 (446)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHH
T ss_pred             CEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHH
Confidence            78899998 457899999998632   22233456788889999999999999999999999999999999999998886


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       241 ~~  242 (446)
T 4ejn_A          241 RE  242 (446)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.32  E-value=2.3e-11  Score=64.14  Aligned_cols=74  Identities=18%  Similarity=0.296  Sum_probs=63.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+++|.+....  ....+.+|+..+..+.|+|++++++.+...+..++++|++++++|.+++.
T Consensus        42 ~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  116 (314)
T 3com_A           42 YGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR  116 (314)
T ss_dssp             -CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHH
Confidence            688999985 468899999997532  33578889999999999999999999999999999999999999999886

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.32  E-value=3.1e-12  Score=70.09  Aligned_cols=77  Identities=21%  Similarity=0.147  Sum_probs=63.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.++....   .....+..|..++..+.|+|++++++.+...+.+++++||+++|+|..++.
T Consensus        74 fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~  153 (412)
T 2vd5_A           74 FSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLS  153 (412)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHH
Confidence            789999985 4789999999863211   112246778888888999999999999999999999999999999999987


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus       154 ~  154 (412)
T 2vd5_A          154 K  154 (412)
T ss_dssp             H
T ss_pred             h
Confidence            5

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.32  E-value=2.4e-11  Score=64.14  Aligned_cols=78  Identities=12%  Similarity=0.115  Sum_probs=65.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+++|.+......   ....+.+|+..+..+.|+|++++.+.+...+..++++|++++++|.+++.
T Consensus        47 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  126 (309)
T 2h34_A           47 MGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLR  126 (309)
T ss_dssp             SSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHH
T ss_pred             CeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHH
Confidence            688999984 46889999998643222   23568889999999999999999999999999999999999999999887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       127 ~~  128 (309)
T 2h34_A          127 RQ  128 (309)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.32  E-value=1.8e-11  Score=63.32  Aligned_cols=78  Identities=29%  Similarity=0.377  Sum_probs=60.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCc----ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTS----QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .+..+|+|.+.....    .....+.+|+..+..+.|+|++++.+.+...+..++++|++++++|.+++.
T Consensus        20 ~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   98 (271)
T 3dtc_A           20 FGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS   98 (271)
T ss_dssp             TEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHT
T ss_pred             CeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhh
Confidence            688999986 378899999864321    224568889999999999999999999998999999999999999999886


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      +.+
T Consensus        99 ~~~  101 (271)
T 3dtc_A           99 GKR  101 (271)
T ss_dssp             SSC
T ss_pred             cCC
Confidence            543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.32  E-value=1.9e-11  Score=64.88  Aligned_cols=79  Identities=33%  Similarity=0.465  Sum_probs=65.0

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++..      .++..+|+|.+... .......+.+|+..+..+.|+|++++++.+......++++|++++|+|.+
T Consensus        43 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  122 (327)
T 2yfx_A           43 FGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS  122 (327)
T ss_dssp             SSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHH
T ss_pred             CeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHH
Confidence            688999973      24678999999643 22334578889999999999999999999998889999999999999999


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++....
T Consensus       123 ~l~~~~  128 (327)
T 2yfx_A          123 FLRETR  128 (327)
T ss_dssp             HHHHTS
T ss_pred             HHHhhc
Confidence            998653

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.32  E-value=1.3e-11  Score=65.29  Aligned_cols=77  Identities=22%  Similarity=0.367  Sum_probs=64.1

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+...      .+..+++|.+.... ......+.+|+.+++.+.|+|++++.+.+......++++|++++|+|.+
T Consensus        38 ~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  117 (322)
T 1p4o_A           38 FGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS  117 (322)
T ss_dssp             SSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred             ceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHH
Confidence            6889988742      36689999987433 2334468899999999999999999999998899999999999999999


Q ss_pred             hhcc
Q 038959           74 FIFG   77 (86)
Q Consensus        74 ~l~~   77 (86)
                      ++..
T Consensus       118 ~l~~  121 (322)
T 1p4o_A          118 YLRS  121 (322)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.32  E-value=7.5e-12  Score=67.18  Aligned_cols=78  Identities=14%  Similarity=0.194  Sum_probs=63.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.++...   ......+..|..++..+ .|+|++++++.+......++++|++++|+|..++
T Consensus        30 fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l  109 (345)
T 1xjd_A           30 FGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI  109 (345)
T ss_dssp             SSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHH
Confidence            789999995 468899999996321   12344567777777765 8999999999999999999999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       110 ~~~  112 (345)
T 1xjd_A          110 QSC  112 (345)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            753

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.32  E-value=1.3e-11  Score=66.89  Aligned_cols=79  Identities=16%  Similarity=0.288  Sum_probs=64.9

Q ss_pred             CCceEEEEc-C-------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKL-P-------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~-~-------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      ||.||++.. .       .+..+|+|.+.... ......+.+|+.++..+ .|+|++++.+.+...+..++++|++++|+
T Consensus        82 ~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~  161 (382)
T 3tt0_A           82 FGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN  161 (382)
T ss_dssp             SEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             CeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCc
Confidence            688999973 1       23479999997543 23345788999999998 89999999999999999999999999999


Q ss_pred             hhhhhccCC
Q 038959           71 LDFFIFGRS   79 (86)
Q Consensus        71 l~~~l~~~~   79 (86)
                      |.+++....
T Consensus       162 L~~~l~~~~  170 (382)
T 3tt0_A          162 LREYLQARR  170 (382)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHhc
Confidence            999998654

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.32  E-value=2.1e-11  Score=63.47  Aligned_cols=78  Identities=24%  Similarity=0.260  Sum_probs=64.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .++..+++|.+....  ......+.+|+..+..+.|+|++++.+.+...+..++++|++++++|.+.+..
T Consensus        19 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~   98 (284)
T 3kk8_A           19 FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA   98 (284)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             CeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHh
Confidence            688999984 468899999986432  23345678899999999999999999999999999999999999999887764


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus        99 ~   99 (284)
T 3kk8_A           99 R   99 (284)
T ss_dssp             H
T ss_pred             c
Confidence            4

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.31  E-value=5.3e-12  Score=67.34  Aligned_cols=73  Identities=22%  Similarity=0.295  Sum_probs=62.6

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcc-----------------cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEE
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQ-----------------GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVY   63 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~   63 (86)
                      ||.||.+.. ++..+|+|.+......                 ....+.+|+..+..+.|+|++++.+.+...+..++++
T Consensus        44 ~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  122 (348)
T 2pml_X           44 FNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIY  122 (348)
T ss_dssp             SCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEE
T ss_pred             CeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence            688999988 8889999998632111                 1167889999999999999999999999999999999


Q ss_pred             eccCCCChhhh
Q 038959           64 EFMPNKSLDFF   74 (86)
Q Consensus        64 e~~~~g~l~~~   74 (86)
                      |++++|+|.++
T Consensus       123 e~~~~~~L~~~  133 (348)
T 2pml_X          123 EYMENDSILKF  133 (348)
T ss_dssp             ECCTTCBSSEE
T ss_pred             eccCCCcHHHH
Confidence            99999999988

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=3.7e-11  Score=62.72  Aligned_cols=77  Identities=29%  Similarity=0.370  Sum_probs=63.3

Q ss_pred             CCceEEEEcC---CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP---DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~---~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+...   .+..+|+|.++... ......+.+|+..+..+.|+|++++.+.+ ..+..++++|++++++|.+++.
T Consensus        23 ~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~  101 (287)
T 1u59_A           23 FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV  101 (287)
T ss_dssp             TEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHT
T ss_pred             ceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHH
Confidence            6889999742   56789999997543 23455788999999999999999999988 5567899999999999999986


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      +.
T Consensus       102 ~~  103 (287)
T 1u59_A          102 GK  103 (287)
T ss_dssp             TC
T ss_pred             hC
Confidence            54

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.31  E-value=2.5e-11  Score=63.92  Aligned_cols=79  Identities=16%  Similarity=0.180  Sum_probs=65.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .++..+|+|.+.....  .....+.+|+..+..+.|+|++++.+.+......++++|++++++|..++..
T Consensus        16 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   95 (311)
T 4agu_A           16 YGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY   95 (311)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHT
T ss_pred             CeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhh
Confidence            688999985 4689999998864332  2234678899999999999999999999999999999999999988888765


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus        96 ~~   97 (311)
T 4agu_A           96 QR   97 (311)
T ss_dssp             SS
T ss_pred             hc
Confidence            43

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=2.9e-11  Score=64.47  Aligned_cols=78  Identities=27%  Similarity=0.392  Sum_probs=64.0

Q ss_pred             CCceEEEEcC-C----CCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP-D----GQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~-~----~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++... .    +..+++|.+.... ......+.+|+..+..+.|+|++++.+.+......++++|++++|+|.++
T Consensus        57 ~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  136 (333)
T 1mqb_A           57 FGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKF  136 (333)
T ss_dssp             SSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHH
T ss_pred             CeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHH
Confidence            6889999743 2    2359999997542 23345688999999999999999999999988999999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       137 l~~~  140 (333)
T 1mqb_A          137 LREK  140 (333)
T ss_dssp             HHHT
T ss_pred             HHhC
Confidence            8754

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.31  E-value=8.6e-12  Score=65.33  Aligned_cols=77  Identities=19%  Similarity=0.219  Sum_probs=53.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .++..+++|.+.... ......+.+|+..+..+.|+|++++++.+...+..++++|++++++|.+++..
T Consensus        28 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  106 (303)
T 2vwi_A           28 TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH  106 (303)
T ss_dssp             CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHH
T ss_pred             ceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHH
Confidence            688999984 468899999986432 23344678899999999999999999999988999999999999999998863

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.31  E-value=4.6e-11  Score=62.81  Aligned_cols=76  Identities=36%  Similarity=0.467  Sum_probs=64.4

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCC----cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRT----SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .+..+++|.+....    ......+.+|+..+..+.|+|++++.+.+......++++|++++|+|.+++.
T Consensus        44 ~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  122 (307)
T 2nru_A           44 FGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS  122 (307)
T ss_dssp             SEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred             CeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHH
Confidence            688999986 57889999986432    2334578899999999999999999999998899999999999999999886


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus       123 ~  123 (307)
T 2nru_A          123 C  123 (307)
T ss_dssp             T
T ss_pred             h
Confidence            4

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.30  E-value=2.6e-11  Score=62.98  Aligned_cols=77  Identities=18%  Similarity=0.208  Sum_probs=63.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeee--eCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSL--HGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+++|.+....  ......+..|+..+..+.|+|++++.+.+.  .....++++|++++++|.+++
T Consensus        19 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   98 (279)
T 2w5a_A           19 YGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI   98 (279)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHH
T ss_pred             CcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHH
Confidence            688999984 478899999997433  233456889999999999999999999774  467899999999999999988


Q ss_pred             cc
Q 038959           76 FG   77 (86)
Q Consensus        76 ~~   77 (86)
                      ..
T Consensus        99 ~~  100 (279)
T 2w5a_A           99 TK  100 (279)
T ss_dssp             HH
T ss_pred             Hh
Confidence            64

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.30  E-value=6.9e-11  Score=61.86  Aligned_cols=78  Identities=15%  Similarity=0.054  Sum_probs=65.2

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+... ++..+++|.+...   .......+..|+..++.+.|+|++++.+.+...+..++++|++++++|.+++.
T Consensus        28 ~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  107 (294)
T 2rku_A           28 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK  107 (294)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH
T ss_pred             CEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHH
Confidence            6889999854 6888999998632   22334568889999999999999999999999999999999999999998876


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       108 ~~  109 (294)
T 2rku_A          108 RR  109 (294)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.30  E-value=3.6e-11  Score=64.08  Aligned_cols=78  Identities=15%  Similarity=0.050  Sum_probs=65.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+++|.+...   .......+.+|+..++.+.|+|++++++.+...+..++++|++++++|.+++.
T Consensus        54 ~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  133 (335)
T 2owb_A           54 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK  133 (335)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHh
Confidence            688999984 46889999998632   22344578889999999999999999999999999999999999999999876


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       134 ~~  135 (335)
T 2owb_A          134 RR  135 (335)
T ss_dssp             HH
T ss_pred             cc
Confidence            53

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.30  E-value=7.4e-11  Score=61.52  Aligned_cols=76  Identities=32%  Similarity=0.485  Sum_probs=61.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCccc-------HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQG-------IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. .++..+|+|.+.......       ...+.+|+..+..+.|+|++++++.+....  ++++|++++|+|.
T Consensus        32 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~  109 (287)
T 4f0f_A           32 FGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLY  109 (287)
T ss_dssp             SSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHH
T ss_pred             ceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHH
Confidence            689999984 578899999986432211       156889999999999999999999886554  6899999999998


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +.+...
T Consensus       110 ~~l~~~  115 (287)
T 4f0f_A          110 HRLLDK  115 (287)
T ss_dssp             HHHHCT
T ss_pred             HHHhcc
Confidence            887654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.30  E-value=1.7e-11  Score=69.20  Aligned_cols=78  Identities=21%  Similarity=0.275  Sum_probs=65.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+....   ......+..|..++..++|+|++++.+.+.....+++++|++++|+|..++.
T Consensus       198 fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~  277 (543)
T 3c4z_A          198 FGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY  277 (543)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHH
T ss_pred             CeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHH
Confidence            789999985 478999999996321   1234567889999999999999999999999999999999999999999887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       278 ~~  279 (543)
T 3c4z_A          278 NV  279 (543)
T ss_dssp             TS
T ss_pred             Hh
Confidence            54

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.30  E-value=2.3e-11  Score=63.16  Aligned_cols=78  Identities=18%  Similarity=0.258  Sum_probs=65.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+++|.+....   ......+.+|+..+..+.|+|++++.+.+...+..++++|++++++|.+++.
T Consensus        24 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  103 (278)
T 3cok_A           24 FAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLK  103 (278)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHH
T ss_pred             ceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHh
Confidence            688999984 578899999986321   1223568889999999999999999999999999999999999999999987


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       104 ~~  105 (278)
T 3cok_A          104 NR  105 (278)
T ss_dssp             TC
T ss_pred             hc
Confidence            54

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.30  E-value=2.8e-11  Score=63.35  Aligned_cols=78  Identities=19%  Similarity=0.174  Sum_probs=63.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---------ccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---------QGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g   69 (86)
                      ||.||.+.. .++..+|+|.++....         .....+.+|+.++..+. |+|++++.+.+......++++|+++++
T Consensus        30 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (298)
T 1phk_A           30 SSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG  109 (298)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCC
Confidence            688999985 4688999999974321         12345778888898884 999999999999999999999999999


Q ss_pred             ChhhhhccC
Q 038959           70 SLDFFIFGR   78 (86)
Q Consensus        70 ~l~~~l~~~   78 (86)
                      +|.+++...
T Consensus       110 ~L~~~l~~~  118 (298)
T 1phk_A          110 ELFDYLTEK  118 (298)
T ss_dssp             BHHHHHHHH
T ss_pred             cHHHHHhcc
Confidence            999998754

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.29  E-value=2.6e-11  Score=62.88  Aligned_cols=78  Identities=19%  Similarity=0.234  Sum_probs=65.3

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+... ++..+++|.+....   ......+.+|+..++.+.|+|++++.+.+......++++|++++++|.+++.
T Consensus        24 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  103 (276)
T 2h6d_A           24 FGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC  103 (276)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH
T ss_pred             CeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHh
Confidence            6889999854 78899999986321   1234567889999999999999999999999999999999999999999886


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       104 ~~  105 (276)
T 2h6d_A          104 KH  105 (276)
T ss_dssp             HH
T ss_pred             cc
Confidence            54

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.29  E-value=2.1e-11  Score=64.77  Aligned_cols=77  Identities=25%  Similarity=0.315  Sum_probs=63.7

Q ss_pred             CCceEEEEcC-CC-----CEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP-DG-----QVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~-~~-----~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+... .+     ..+++|.+.... ......+.+|+.++..+ .|+|++++++.+...+..++++|++++|+|.
T Consensus        59 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~  138 (333)
T 2i1m_A           59 FGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL  138 (333)
T ss_dssp             SEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHH
T ss_pred             CcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHH
Confidence            6889999842 23     379999997543 23345788999999998 8999999999999999999999999999999


Q ss_pred             hhhcc
Q 038959           73 FFIFG   77 (86)
Q Consensus        73 ~~l~~   77 (86)
                      +++..
T Consensus       139 ~~l~~  143 (333)
T 2i1m_A          139 NFLRR  143 (333)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.29  E-value=8.9e-11  Score=61.42  Aligned_cols=75  Identities=21%  Similarity=0.246  Sum_probs=61.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+|+|.+....  ......+.+|+..+..+.|+|++++.+.+......++++|++++ ++...+.
T Consensus        15 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~   92 (292)
T 3o0g_A           15 YGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFD   92 (292)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHH
T ss_pred             CeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHH
Confidence            689999984 468899999997432  23345788999999999999999999999999999999999976 5555444

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.29  E-value=7.2e-11  Score=61.65  Aligned_cols=78  Identities=22%  Similarity=0.168  Sum_probs=65.7

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+... ++..+++|.+...  .......+.+|+..+..+.|+|++++.+.+......++++|++++++|.+.+..
T Consensus        35 ~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  114 (287)
T 2wei_A           35 FGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK  114 (287)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             CEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHh
Confidence            6889999854 6889999998632  234556788999999999999999999999999999999999999999887764


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus       115 ~  115 (287)
T 2wei_A          115 R  115 (287)
T ss_dssp             H
T ss_pred             c
Confidence            3

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.29  E-value=5.8e-11  Score=63.02  Aligned_cols=79  Identities=27%  Similarity=0.403  Sum_probs=62.7

Q ss_pred             CCceEEEEcC-CCCE--EEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQV--IAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~~--~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+... ++..  +++|.+.... ......+..|+..+..+ .|+|++++.+.+...+..++++|++++|+|.+++
T Consensus        38 ~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l  117 (327)
T 1fvr_A           38 FGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL  117 (327)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHH
T ss_pred             CceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHH
Confidence            6889999843 5554  4888886432 23344688899999999 8999999999999999999999999999999999


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus       118 ~~~~  121 (327)
T 1fvr_A          118 RKSR  121 (327)
T ss_dssp             HTTC
T ss_pred             Hhcc
Confidence            7653

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.29  E-value=1.1e-11  Score=67.62  Aligned_cols=78  Identities=18%  Similarity=0.264  Sum_probs=62.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.++. .++..+|+|.++....   .....+..|..++..+ .|||++++++.+.....+++++|++++|+|..++
T Consensus        65 fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l  144 (396)
T 4dc2_A           65 YAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM  144 (396)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHH
Confidence            789999984 4688999999964321   1223467777777765 8999999999999999999999999999999888


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       145 ~~~  147 (396)
T 4dc2_A          145 QRQ  147 (396)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            754

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.29  E-value=4.1e-11  Score=63.22  Aligned_cols=74  Identities=24%  Similarity=0.341  Sum_probs=61.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||++.. .+..+++|.+...  .....+..|+..++.+.|+|++++++.+.  +..++++|++++|+|.+++....
T Consensus        21 ~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~   94 (307)
T 2eva_A           21 FGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAE   94 (307)
T ss_dssp             SSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSS
T ss_pred             CceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccC
Confidence            688999986 3678999998643  34567889999999999999999998876  44789999999999999987653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.28  E-value=4.5e-11  Score=62.50  Aligned_cols=77  Identities=17%  Similarity=0.191  Sum_probs=64.1

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+....+..+|+|.+.....  .....+.+|+.+++.+.|+|++++++.+...+..++++|++++ +|.+++...
T Consensus        15 ~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~   93 (288)
T 1ob3_A           15 YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVC   93 (288)
T ss_dssp             TEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTS
T ss_pred             CEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhc
Confidence            6889999876789999999964332  2235678999999999999999999999999999999999975 888877653

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.28  E-value=6.4e-11  Score=62.40  Aligned_cols=78  Identities=18%  Similarity=0.182  Sum_probs=62.0

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeee--------------eCCceEEEEec
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSL--------------HGPERILVYEF   65 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------~~~~~~l~~e~   65 (86)
                      ||.||++... ++..+|+|.+..........+.+|+..++.+.|+|++++++.+.              .....++++|+
T Consensus        24 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  103 (320)
T 2i6l_A           24 NGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY  103 (320)
T ss_dssp             --CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEEC
T ss_pred             CeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeec
Confidence            6889999854 68899999997655555567889999999999999999988763              34678899999


Q ss_pred             cCCCChhhhhccCC
Q 038959           66 MPNKSLDFFIFGRS   79 (86)
Q Consensus        66 ~~~g~l~~~l~~~~   79 (86)
                      ++ |+|.+++...+
T Consensus       104 ~~-~~L~~~~~~~~  116 (320)
T 2i6l_A          104 ME-TDLANVLEQGP  116 (320)
T ss_dssp             CS-EEHHHHHTTCC
T ss_pred             cC-CCHHHHhhcCC
Confidence            97 68998887543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.28  E-value=1.3e-11  Score=65.19  Aligned_cols=78  Identities=22%  Similarity=0.238  Sum_probs=62.4

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCC----ceEEEEeccCCCChh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP----ERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+. ..++..+|+|.+......   ....+.+|+..+..+.|+|++++++.+....    .+++++|++++++|.
T Consensus        25 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~  104 (311)
T 3ork_A           25 MSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLR  104 (311)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHH
T ss_pred             CEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHH
Confidence            68899998 457889999999754322   2346788999999999999999998876543    348999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++...
T Consensus       105 ~~l~~~  110 (311)
T 3ork_A          105 DIVHTE  110 (311)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998754

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.28  E-value=6.3e-11  Score=61.90  Aligned_cols=78  Identities=26%  Similarity=0.247  Sum_probs=63.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeee----CCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH----GPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++.. .++..+++|.+...  .......+..|+..++.+.|+|++++++.+..    ....++++|++++|+|.+
T Consensus        39 ~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~  118 (290)
T 1t4h_A           39 FKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKT  118 (290)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHH
T ss_pred             CeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHH
Confidence            688999984 46889999998643  23344568899999999999999999988754    355889999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus       119 ~l~~~  123 (290)
T 1t4h_A          119 YLKRF  123 (290)
T ss_dssp             HHHHH
T ss_pred             HHHHc
Confidence            98753

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.28  E-value=4.2e-11  Score=63.69  Aligned_cols=78  Identities=17%  Similarity=0.213  Sum_probs=62.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++. ..++..+|+|.++....  .....+.+|+.+++.+.|+|++++.+.+......++++|+++ |+|.+++..
T Consensus        47 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~  125 (329)
T 3gbz_A           47 YGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDK  125 (329)
T ss_dssp             SSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHH
T ss_pred             CeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhh
Confidence            68999998 45788999999974332  223457789999999999999999999999999999999997 589988876


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus       126 ~~  127 (329)
T 3gbz_A          126 NP  127 (329)
T ss_dssp             CT
T ss_pred             cC
Confidence            54

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.28  E-value=8.7e-11  Score=62.46  Aligned_cols=78  Identities=19%  Similarity=0.149  Sum_probs=65.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.+...  .......+.+|+..+..+ +|+|++++.+.+......++++|++++|+|.+++.
T Consensus        42 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  121 (327)
T 3lm5_A           42 FAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCL  121 (327)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGS
T ss_pred             CeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHH
Confidence            688999984 46899999998642  233456788899988887 57999999999999999999999999999999986


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       122 ~~  123 (327)
T 3lm5_A          122 PE  123 (327)
T ss_dssp             SC
T ss_pred             Hh
Confidence            54

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.27  E-value=5e-11  Score=64.32  Aligned_cols=78  Identities=18%  Similarity=0.217  Sum_probs=64.3

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcc--------cHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQ--------GIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~--------~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      ||.||++... +|..+|+|.++.....        ....+.+|+.++..+ .|+|++.+.+.+......++++|++++++
T Consensus       107 ~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~  186 (365)
T 2y7j_A          107 SSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE  186 (365)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCB
T ss_pred             CEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCc
Confidence            6889999854 7899999998753211        134567888889887 79999999999999999999999999999


Q ss_pred             hhhhhccC
Q 038959           71 LDFFIFGR   78 (86)
Q Consensus        71 l~~~l~~~   78 (86)
                      |.+++...
T Consensus       187 L~~~l~~~  194 (365)
T 2y7j_A          187 LFDYLTEK  194 (365)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhc
Confidence            99988754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.27  E-value=7.2e-11  Score=62.80  Aligned_cols=78  Identities=19%  Similarity=0.266  Sum_probs=64.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc--cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ--GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .++..+|+|.+......  ....+.+|+..+..+.|+|++++.+.+......++++|+++++.+..++..
T Consensus        38 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  117 (331)
T 4aaa_A           38 YGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF  117 (331)
T ss_dssp             TSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHS
T ss_pred             CEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhh
Confidence            689999985 46889999998643322  234577899999999999999999999999999999999999888877654


Q ss_pred             C
Q 038959           78 R   78 (86)
Q Consensus        78 ~   78 (86)
                      .
T Consensus       118 ~  118 (331)
T 4aaa_A          118 P  118 (331)
T ss_dssp             T
T ss_pred             c
Confidence            3

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.27  E-value=4.3e-11  Score=68.61  Aligned_cols=78  Identities=23%  Similarity=0.243  Sum_probs=63.6

Q ss_pred             CCceEEEEc---CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL---PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~---~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+|.+   ..+..+|+|.++...  ......+.+|+.++..++|+|++++++.+. .+..++++|++++|+|.+++
T Consensus       382 fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l  460 (635)
T 4fl3_A          382 FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYL  460 (635)
T ss_dssp             SEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTEEHHHHH
T ss_pred             CEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCCCHHHHH
Confidence            789999964   246789999997432  234568999999999999999999999885 45588999999999999999


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus       461 ~~~~  464 (635)
T 4fl3_A          461 QQNR  464 (635)
T ss_dssp             HHCT
T ss_pred             hhCC
Confidence            7654

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.27  E-value=3.3e-11  Score=66.09  Aligned_cols=78  Identities=15%  Similarity=0.184  Sum_probs=61.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc--------ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS--------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l   71 (86)
                      ||.||++. ..++..+|+|.+.....        .....+.+|+.+++.+.|+|++++.+.+. .+..++++|++++|+|
T Consensus       148 ~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~e~~~~g~L  226 (419)
T 3i6u_A          148 CGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGEL  226 (419)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEEECCTTCBG
T ss_pred             CeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEEEcCCCCcH
Confidence            78999998 45788999999863211        11124778999999999999999998874 4557899999999999


Q ss_pred             hhhhccCC
Q 038959           72 DFFIFGRS   79 (86)
Q Consensus        72 ~~~l~~~~   79 (86)
                      .+++....
T Consensus       227 ~~~l~~~~  234 (419)
T 3i6u_A          227 FDKVVGNK  234 (419)
T ss_dssp             GGGTSSSC
T ss_pred             HHHHhccC
Confidence            99887553

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.26  E-value=2e-11  Score=65.69  Aligned_cols=78  Identities=18%  Similarity=0.198  Sum_probs=63.9

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC---cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+... ++..+|+|.++...   ......+..|..++..+ .|++++.+.+.+...+..++++|++++|+|..++
T Consensus        33 fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l  112 (353)
T 2i0e_A           33 FGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI  112 (353)
T ss_dssp             TEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHH
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHH
Confidence            7899999854 57889999986321   12345677888888876 8999999999999999999999999999999988


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       113 ~~~  115 (353)
T 2i0e_A          113 QQV  115 (353)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            753

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.26  E-value=1.3e-11  Score=66.11  Aligned_cols=77  Identities=17%  Similarity=0.198  Sum_probs=63.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+. ..++..+|+|.+....   ......+.+|+..++.+.|+|++++++.+..+...++++|++ +|+|.+++.
T Consensus        22 ~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~  100 (336)
T 3h4j_B           22 FGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIV  100 (336)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHH
Confidence            78899998 4578999999985321   122346788999999999999999999999999999999999 678888776


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       101 ~~  102 (336)
T 3h4j_B          101 EK  102 (336)
T ss_dssp             HH
T ss_pred             Hc
Confidence            43

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.26  E-value=5.8e-11  Score=63.66  Aligned_cols=75  Identities=21%  Similarity=0.137  Sum_probs=60.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+|+|.++.....    ...|+..+..+ .|+|++++++.+......++++|++++|+|.+++...
T Consensus        35 ~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~  110 (342)
T 2qr7_A           35 YSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ  110 (342)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTC
T ss_pred             CEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHc
Confidence            688999984 46889999999754322    23456666665 7999999999999999999999999999999988765


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus       111 ~  111 (342)
T 2qr7_A          111 K  111 (342)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.26  E-value=5.5e-11  Score=62.21  Aligned_cols=77  Identities=17%  Similarity=0.248  Sum_probs=62.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeee-------------CCceEEEEecc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH-------------GPERILVYEFM   66 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------~~~~~l~~e~~   66 (86)
                      ||.||.+.. .++..+++|.+... ......+.+|+..+..+.|+|++++.+.+..             ....++++|++
T Consensus        19 ~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~   97 (303)
T 1zy4_A           19 FGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYC   97 (303)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECC
T ss_pred             cEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecC
Confidence            688999984 47889999998532 2334568889999999999999999887643             45688999999


Q ss_pred             CCCChhhhhccC
Q 038959           67 PNKSLDFFIFGR   78 (86)
Q Consensus        67 ~~g~l~~~l~~~   78 (86)
                      ++|+|.+++.+.
T Consensus        98 ~~~~L~~~l~~~  109 (303)
T 1zy4_A           98 ENGTLYDLIHSE  109 (303)
T ss_dssp             CSCBHHHHHHHS
T ss_pred             CCCCHHHhhhcc
Confidence            999999998754

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.26  E-value=3.4e-11  Score=65.25  Aligned_cols=78  Identities=15%  Similarity=0.158  Sum_probs=56.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHHHH-HhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEAKV-IAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.++. .++..+|+|.++....   .....+..|... ++.+.|+|++++++.+...+.+++++|++++|+|..++
T Consensus        51 fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l  130 (373)
T 2r5t_A           51 FGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL  130 (373)
T ss_dssp             TCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHH
T ss_pred             CeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHH
Confidence            789999985 4688999999964321   222345566655 45689999999999999999999999999999999988


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       131 ~~~  133 (373)
T 2r5t_A          131 QRE  133 (373)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            753

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.25  E-value=4.4e-11  Score=64.24  Aligned_cols=75  Identities=21%  Similarity=0.318  Sum_probs=62.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++. ..++..+|+|.+......   ....+.+|+..+..+.|+|++++.+.+...+..++++|++. |++.+++.
T Consensus        67 ~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~  145 (348)
T 1u5q_A           67 FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLE  145 (348)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHH
T ss_pred             CEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHH
Confidence            68899998 457889999999743322   23468899999999999999999999999999999999997 57777764

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.25  E-value=1.4e-10  Score=60.72  Aligned_cols=78  Identities=22%  Similarity=0.303  Sum_probs=62.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .++..+++|.+....  ......+.+|+..+..+.|+|++++.+.+...+..++++|++. ++|.+++..
T Consensus        16 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~   94 (299)
T 2r3i_A           16 YGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDA   94 (299)
T ss_dssp             SSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHH
T ss_pred             CeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHh
Confidence            688999985 478899999986432  1223567889999999999999999999999999999999997 589888875


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus        95 ~~   96 (299)
T 2r3i_A           95 SA   96 (299)
T ss_dssp             TT
T ss_pred             hh
Confidence            53

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.25  E-value=6e-11  Score=62.86  Aligned_cols=78  Identities=17%  Similarity=0.162  Sum_probs=60.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc--------ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS--------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+.. .++..+|+|.+.....        .....+..|+.++..+.|+|++++.+.+.... .++++|++++++|
T Consensus        23 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L  101 (322)
T 2ycf_A           23 CGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGEL  101 (322)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEET
T ss_pred             CEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcH
Confidence            688999984 4688999999864321        11234778999999999999999999886554 8999999999999


Q ss_pred             hhhhccCC
Q 038959           72 DFFIFGRS   79 (86)
Q Consensus        72 ~~~l~~~~   79 (86)
                      .+++....
T Consensus       102 ~~~~~~~~  109 (322)
T 2ycf_A          102 FDKVVGNK  109 (322)
T ss_dssp             HHHHSTTC
T ss_pred             HHHHhccC
Confidence            99887543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.24  E-value=9.1e-11  Score=62.11  Aligned_cols=77  Identities=27%  Similarity=0.466  Sum_probs=56.9

Q ss_pred             CCceEEEEcC-CCC---EEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCce------EEEEeccCC
Q 038959            1 GSSLLQGKLP-DGQ---VIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER------ILVYEFMPN   68 (86)
Q Consensus         1 fg~v~~~~~~-~~~---~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------~l~~e~~~~   68 (86)
                      ||.||.+... .+.   .+|+|.+...  .......+.+|+..++.+.|+|++++++.+......      ++++|++++
T Consensus        36 ~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~  115 (323)
T 3qup_A           36 FGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKH  115 (323)
T ss_dssp             TEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTT
T ss_pred             CeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccC
Confidence            6889999854 332   7999998743  223445788999999999999999999988765544      899999999


Q ss_pred             CChhhhhcc
Q 038959           69 KSLDFFIFG   77 (86)
Q Consensus        69 g~l~~~l~~   77 (86)
                      |+|.+++..
T Consensus       116 ~~L~~~l~~  124 (323)
T 3qup_A          116 GDLHAFLLA  124 (323)
T ss_dssp             CBHHHHHHH
T ss_pred             CcHHHHHHh
Confidence            999998864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.24  E-value=1.9e-10  Score=60.14  Aligned_cols=78  Identities=24%  Similarity=0.269  Sum_probs=61.9

Q ss_pred             CCceEEEEc-CCC---CEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCc-eEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDG---QVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPE-RILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~---~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.. ..+   ..+++|.+.... ......+.+|+..++.+.|+|++++.+.+...+. .+++++++.+|+|.++
T Consensus        34 ~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~  113 (298)
T 3pls_A           34 FGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQF  113 (298)
T ss_dssp             TEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHH
T ss_pred             CceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHH
Confidence            688999983 233   268999987533 2334578899999999999999999999876555 4899999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       114 ~~~~  117 (298)
T 3pls_A          114 IRSP  117 (298)
T ss_dssp             HHCT
T ss_pred             Hhcc
Confidence            8763

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.24  E-value=6.5e-11  Score=64.13  Aligned_cols=78  Identities=26%  Similarity=0.350  Sum_probs=62.1

Q ss_pred             CCceEEEEcC--C--CCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeee-eCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP--D--GQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSL-HGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~--~--~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++...  .  +..+++|.++... ......+.+|+.+++.+.|+|++++++.+. ..+..++++|++++|+|.++
T Consensus       102 fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~  181 (373)
T 3c1x_A          102 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF  181 (373)
T ss_dssp             SSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHH
T ss_pred             CeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHH
Confidence            7899999842  2  2367899986432 234457889999999999999999999864 45678999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       182 l~~~  185 (373)
T 3c1x_A          182 IRNE  185 (373)
T ss_dssp             HHCT
T ss_pred             Hhhc
Confidence            9754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.24  E-value=4e-11  Score=62.35  Aligned_cols=78  Identities=17%  Similarity=0.184  Sum_probs=64.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+++|.+....   ......+.+|+..+..+.|+|++++.+.+......++++|++++|+|.+++.
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~  101 (279)
T 3fdn_A           22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ  101 (279)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             CeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHH
Confidence            688999984 467899999985321   1224467889999999999999999999999999999999999999998886


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       102 ~~  103 (279)
T 3fdn_A          102 KL  103 (279)
T ss_dssp             HH
T ss_pred             hc
Confidence            53

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.24  E-value=1.1e-10  Score=61.02  Aligned_cols=78  Identities=23%  Similarity=0.258  Sum_probs=61.9

Q ss_pred             CCceEEEEc---CCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL---PDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~---~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.+   ..+..+++|.++....  .....+.+|+..+..+.|+|++++.+.+ ..+..++++|++++++|.+++
T Consensus        30 ~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l  108 (291)
T 1xbb_A           30 FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL  108 (291)
T ss_dssp             SEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHH
T ss_pred             CeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHH
Confidence            688999953   2467899999974322  2245788999999999999999999988 567789999999999999998


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus       109 ~~~~  112 (291)
T 1xbb_A          109 QQNR  112 (291)
T ss_dssp             HHCT
T ss_pred             HhCc
Confidence            7654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.23  E-value=8.4e-11  Score=62.28  Aligned_cols=77  Identities=25%  Similarity=0.301  Sum_probs=63.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeee------CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLH------GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~------~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. .++..+++|.+.... .....+.+|+..+..+ .|+|++++++.+..      ....++++|++++|+|.
T Consensus        37 ~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~  115 (326)
T 2x7f_A           37 YGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVT  115 (326)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHH
T ss_pred             CEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHH
Confidence            688999984 578899999987432 3345778888888887 89999999998865      46789999999999999


Q ss_pred             hhhccC
Q 038959           73 FFIFGR   78 (86)
Q Consensus        73 ~~l~~~   78 (86)
                      +++...
T Consensus       116 ~~l~~~  121 (326)
T 2x7f_A          116 DLIKNT  121 (326)
T ss_dssp             HHHHHS
T ss_pred             HHHHhc
Confidence            998754

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.23  E-value=1.9e-10  Score=60.23  Aligned_cols=78  Identities=23%  Similarity=0.313  Sum_probs=61.4

Q ss_pred             CCceEEEEcC-C---CCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeee-eeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP-D---GQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCS-LHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~-~---~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++... .   ...+++|.+.... ......+.+|+..++.+.|+|++++.+.+ ...+..++++|++++|+|.++
T Consensus        38 ~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~  117 (298)
T 3f66_A           38 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF  117 (298)
T ss_dssp             TEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHH
T ss_pred             CceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHH
Confidence            6889999843 2   2357899887533 23345788999999999999999999985 456678999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       118 l~~~  121 (298)
T 3f66_A          118 IRNE  121 (298)
T ss_dssp             HHCT
T ss_pred             HHhc
Confidence            9754

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.22  E-value=7.6e-11  Score=61.27  Aligned_cols=74  Identities=27%  Similarity=0.349  Sum_probs=60.4

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeee----------------CCceEEEE
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH----------------GPERILVY   63 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------~~~~~l~~   63 (86)
                      ||.||.+... ++..+++|.+....    ..+.+|+..+..+.|+|++++.+.+..                ....++++
T Consensus        24 ~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~   99 (284)
T 2a19_B           24 FGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQM   99 (284)
T ss_dssp             SCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEE
T ss_pred             ceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEE
Confidence            6899999854 78999999997543    245678889999999999999987643                34578999


Q ss_pred             eccCCCChhhhhccC
Q 038959           64 EFMPNKSLDFFIFGR   78 (86)
Q Consensus        64 e~~~~g~l~~~l~~~   78 (86)
                      |++++|+|.+++...
T Consensus       100 e~~~~~~L~~~l~~~  114 (284)
T 2a19_B          100 EFCDKGTLEQWIEKR  114 (284)
T ss_dssp             CCCCSCBHHHHHHHG
T ss_pred             eccCCCCHHHHHhhc
Confidence            999999999998654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.22  E-value=4.4e-11  Score=62.33  Aligned_cols=78  Identities=17%  Similarity=0.172  Sum_probs=64.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+.. .++..+++|.+....   ......+.+|+..+..+.|+|++++.+.+......++++|++++|+|.+++.
T Consensus        27 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  106 (284)
T 2vgo_A           27 FGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ  106 (284)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             CeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHH
Confidence            688999984 467789999985321   1234568889999999999999999999999999999999999999998887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       107 ~~  108 (284)
T 2vgo_A          107 KH  108 (284)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.22  E-value=6.2e-11  Score=63.32  Aligned_cols=79  Identities=15%  Similarity=0.094  Sum_probs=64.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcc--------cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCC-C
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQ--------GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK-S   70 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g-~   70 (86)
                      ||.||++. ..++..+|+|.+......        ....+..|+.++..+.|+|++++++.+...+..++++|++..| +
T Consensus        37 ~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~  116 (335)
T 3dls_A           37 FGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLD  116 (335)
T ss_dssp             SCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCB
T ss_pred             CEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCcc
Confidence            78999998 457889999999743211        2224667899999999999999999999999999999998777 8


Q ss_pred             hhhhhccCC
Q 038959           71 LDFFIFGRS   79 (86)
Q Consensus        71 l~~~l~~~~   79 (86)
                      |..++....
T Consensus       117 l~~~~~~~~  125 (335)
T 3dls_A          117 LFAFIDRHP  125 (335)
T ss_dssp             HHHHHHTCC
T ss_pred             HHHHHHhcC
Confidence            998887654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.21  E-value=2.8e-10  Score=60.61  Aligned_cols=74  Identities=23%  Similarity=0.273  Sum_probs=60.2

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhc--CCCCcccceeeeeeeCC----ceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAK--PQHTNIVRLIGCSLHGP----ERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~----~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.. .+..+|+|.+..   .....+..|..++..  +.|+|++++.+.+....    ..++++|++++|+|.++
T Consensus        55 ~g~Vy~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~  130 (342)
T 1b6c_B           55 FGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDY  130 (342)
T ss_dssp             TEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHH
T ss_pred             CcEEEEEEE-cCccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHH
Confidence            688999986 488999999853   334566777777765  78999999999987665    78999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +.+.
T Consensus       131 l~~~  134 (342)
T 1b6c_B          131 LNRY  134 (342)
T ss_dssp             HHHC
T ss_pred             Hhcc
Confidence            8754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.21  E-value=2.9e-10  Score=61.04  Aligned_cols=78  Identities=23%  Similarity=0.182  Sum_probs=62.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-----CCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-----HTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.. .++..+|+|.+... .........|..++..+.     |+|++++++.+...+..++++|++ +++|.++
T Consensus        48 ~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~  125 (360)
T 3llt_A           48 FGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEI  125 (360)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHH
T ss_pred             CeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHH
Confidence            688999984 57889999998642 233345666777777664     999999999999999999999999 8899999


Q ss_pred             hccCCC
Q 038959           75 IFGRSF   80 (86)
Q Consensus        75 l~~~~~   80 (86)
                      +.....
T Consensus       126 ~~~~~~  131 (360)
T 3llt_A          126 ITRNNY  131 (360)
T ss_dssp             HHHTTT
T ss_pred             HHhcCC
Confidence            876543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.21  E-value=2.5e-10  Score=59.46  Aligned_cols=77  Identities=23%  Similarity=0.235  Sum_probs=61.6

Q ss_pred             CCceEEEEcC----CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP----DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+...    .+..+++|.+.... ......+.+|+..+..+.|+|++++++.+ ..+..++++|++++|+|.+++
T Consensus        28 ~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l  106 (281)
T 1mp8_A           28 FGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFL  106 (281)
T ss_dssp             SSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECCTTEEHHHHH
T ss_pred             CeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecCCCCCHHHHH
Confidence            6899999843    24468999987533 23345788999999999999999999887 456788999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       107 ~~~  109 (281)
T 1mp8_A          107 QVR  109 (281)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.21  E-value=6.2e-11  Score=63.01  Aligned_cols=75  Identities=17%  Similarity=0.115  Sum_probs=63.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+. ..++..+|+|.+.....  ...+..|+.++..+ .|+|++.+.+.+......++++|++ +++|.+++...
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~   98 (330)
T 2izr_A           22 FGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLC   98 (330)
T ss_dssp             TTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT
T ss_pred             CceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHc
Confidence            78999998 45788999999864322  23577889999998 8999999999999999999999999 89999998753

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.20  E-value=1.2e-10  Score=60.51  Aligned_cols=75  Identities=27%  Similarity=0.404  Sum_probs=60.1

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeee-CCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH-GPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .+..+++|.++..  ...+.+.+|+..+..+.|+|++++.+.+.. .+..++++|++++++|.+++...
T Consensus        34 ~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  109 (278)
T 1byg_A           34 FGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR  109 (278)
T ss_dssp             SCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHH
T ss_pred             CceEEEEEE-cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhc
Confidence            688999876 4778999998743  345678899999999999999999998654 45789999999999999988643

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.20  E-value=9.6e-11  Score=63.07  Aligned_cols=74  Identities=14%  Similarity=0.086  Sum_probs=59.1

Q ss_pred             CCceEEEE------cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC---CCcccceeeeeeeCCceEEEEeccCCCCh
Q 038959            1 GSSLLQGK------LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ---HTNIVRLIGCSLHGPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~------~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~l~~e~~~~g~l   71 (86)
                      ||.||++.      ...+..+|+|.+...   ....+..+...+..+.   |++++.+++.+...+..++++||+++|+|
T Consensus        78 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L  154 (365)
T 3e7e_A           78 FAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTL  154 (365)
T ss_dssp             SEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBH
T ss_pred             CEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcH
Confidence            78999993      346889999999753   3345666666666654   89999999999999999999999999999


Q ss_pred             hhhhcc
Q 038959           72 DFFIFG   77 (86)
Q Consensus        72 ~~~l~~   77 (86)
                      .+++..
T Consensus       155 ~~~l~~  160 (365)
T 3e7e_A          155 LNAINL  160 (365)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999874

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.20  E-value=1.1e-10  Score=61.49  Aligned_cols=79  Identities=18%  Similarity=0.286  Sum_probs=62.8

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcC-CCCcccceeeeeeeC-CceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHG-PERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+..      .++..+|+|.+..... .....+.+|+..+..+ +|+|++++.+.+... ...++++|++++|+|
T Consensus        40 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L  119 (316)
T 2xir_A           40 FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL  119 (316)
T ss_dssp             SEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEH
T ss_pred             ceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcH
Confidence            688999972      2457899999975432 2344688899999988 799999999988664 458999999999999


Q ss_pred             hhhhccCC
Q 038959           72 DFFIFGRS   79 (86)
Q Consensus        72 ~~~l~~~~   79 (86)
                      .+++....
T Consensus       120 ~~~l~~~~  127 (316)
T 2xir_A          120 STYLRSKR  127 (316)
T ss_dssp             HHHHHTCT
T ss_pred             HHHHHhcc
Confidence            99998654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.20  E-value=1.3e-10  Score=63.46  Aligned_cols=74  Identities=20%  Similarity=0.139  Sum_probs=58.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHh-cCCCCcccceeeeeee----CCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIA-KPQHTNIVRLIGCSLH----GPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~----~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+.. .++..+|+|.++..     ..+.+|+..+. ..+|+|++++++.+..    ...+++++|++++|+|.++
T Consensus        75 ~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~  149 (400)
T 1nxk_A           75 NGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSR  149 (400)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHH
Confidence            688999984 47889999998632     24566776654 4589999999998764    5668999999999999999


Q ss_pred             hccCC
Q 038959           75 IFGRS   79 (86)
Q Consensus        75 l~~~~   79 (86)
                      +....
T Consensus       150 l~~~~  154 (400)
T 1nxk_A          150 IQDRG  154 (400)
T ss_dssp             HHCC-
T ss_pred             HHHhC
Confidence            97643

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.19  E-value=7.7e-11  Score=67.93  Aligned_cols=77  Identities=17%  Similarity=0.149  Sum_probs=59.3

Q ss_pred             CCceEEEEcC--CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCc-----eEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP--DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPE-----RILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~l~~e~~~~g~l~   72 (86)
                      ||.||.+...  ++..+++|.+.... ......+..|...+..+.|+|++++++.+...+.     .++++|++++++|.
T Consensus        93 ~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~  172 (681)
T 2pzi_A           93 LGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK  172 (681)
T ss_dssp             TEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC
T ss_pred             CeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHH
Confidence            6889999843  57889999986432 2334467889999999999999999999876554     69999999999998


Q ss_pred             hhhcc
Q 038959           73 FFIFG   77 (86)
Q Consensus        73 ~~l~~   77 (86)
                      +++..
T Consensus       173 ~~~~~  177 (681)
T 2pzi_A          173 RSKGQ  177 (681)
T ss_dssp             ----C
T ss_pred             HHHhC
Confidence            87654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.19  E-value=5.3e-10  Score=59.30  Aligned_cols=74  Identities=19%  Similarity=0.245  Sum_probs=62.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCcccceeeeeee--CCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLH--GPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+. ..++..+|+|.+..   .....+.+|+.++..+. |+|++.+.+.+..  ....++++|++++++|..++.
T Consensus        49 ~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~  125 (330)
T 3nsz_A           49 YSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ  125 (330)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG
T ss_pred             CeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH
Confidence            68899998 45789999999964   33457889999999986 9999999999876  567899999999999988875


Q ss_pred             c
Q 038959           77 G   77 (86)
Q Consensus        77 ~   77 (86)
                      .
T Consensus       126 ~  126 (330)
T 3nsz_A          126 T  126 (330)
T ss_dssp             G
T ss_pred             h
Confidence            3

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.18  E-value=2.8e-10  Score=59.79  Aligned_cols=74  Identities=20%  Similarity=0.152  Sum_probs=59.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHH-hcCCCCcccceeeeeee----CCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVI-AKPQHTNIVRLIGCSLH----GPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~----~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+.. .++..+|+|.++..     .....|+..+ +...|+|++++.+.+..    ....++++|++++|+|.++
T Consensus        31 ~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~  105 (299)
T 3m2w_A           31 NGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSR  105 (299)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHH
T ss_pred             CeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHH
Confidence            688999984 57889999998632     3456677766 45689999999998865    6678999999999999999


Q ss_pred             hccCC
Q 038959           75 IFGRS   79 (86)
Q Consensus        75 l~~~~   79 (86)
                      +....
T Consensus       106 l~~~~  110 (299)
T 3m2w_A          106 IQDRG  110 (299)
T ss_dssp             HHHCT
T ss_pred             HHhcc
Confidence            98654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.17  E-value=3.1e-10  Score=60.72  Aligned_cols=78  Identities=22%  Similarity=0.270  Sum_probs=64.1

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCC--CcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQH--TNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||.+...++..+|+|.+....  ......+.+|+..+..+.|  +|++.+++.+......++++| +.+++|.+++.
T Consensus        22 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~  100 (343)
T 3dbq_A           22 SSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK  100 (343)
T ss_dssp             SEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHH
T ss_pred             CeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHH
Confidence            688999987778899999987432  2233568889999998865  999999999999999999999 56889999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       101 ~~~  103 (343)
T 3dbq_A          101 KKK  103 (343)
T ss_dssp             HSC
T ss_pred             hcC
Confidence            654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.16  E-value=3.4e-10  Score=59.32  Aligned_cols=74  Identities=19%  Similarity=0.261  Sum_probs=56.3

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhc--CCCCcccceeeeeee----CCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAK--PQHTNIVRLIGCSLH----GPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~----~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.. ++..+|+|.+..   .....+..+..++..  +.|+|++++++.+..    ....++++|++++|+|.++
T Consensus        21 ~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~   96 (301)
T 3q4u_A           21 YGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDY   96 (301)
T ss_dssp             SEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHH
T ss_pred             CcEEEEEEE-CCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHH
Confidence            688999986 688899999853   233445555555544  799999999987643    3458899999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus        97 l~~~  100 (301)
T 3q4u_A           97 LQLT  100 (301)
T ss_dssp             HTTC
T ss_pred             Hhhc
Confidence            8654

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.16  E-value=5.2e-10  Score=64.44  Aligned_cols=78  Identities=23%  Similarity=0.231  Sum_probs=62.4

Q ss_pred             CCceEEEEcC----CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP----DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.|...    .+..+++|.+.... ......+..|+..+..+.|+|++++++.+. .+..++++|++++|+|.+++
T Consensus       403 fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l  481 (656)
T 2j0j_A          403 FGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFL  481 (656)
T ss_dssp             SCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHH
T ss_pred             CEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHH
Confidence            7899999853    24578999886432 233457889999999999999999999874 56689999999999999998


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus       482 ~~~~  485 (656)
T 2j0j_A          482 QVRK  485 (656)
T ss_dssp             HHTT
T ss_pred             Hhcc
Confidence            7543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.16  E-value=3.8e-10  Score=61.45  Aligned_cols=78  Identities=22%  Similarity=0.264  Sum_probs=64.0

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCC--CCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQ--HTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++....+..+|+|.+....  ......+.+|+.++..+.  |+|++++++.+...+.+++++| +.+++|.+++.
T Consensus        69 fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~  147 (390)
T 2zmd_A           69 SSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK  147 (390)
T ss_dssp             SEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHH
T ss_pred             CeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHH
Confidence            789999986678899999986432  233457889999999885  5999999999998899999999 66889999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       148 ~~~  150 (390)
T 2zmd_A          148 KKK  150 (390)
T ss_dssp             HCS
T ss_pred             hcC
Confidence            654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.16  E-value=3.4e-10  Score=60.22  Aligned_cols=77  Identities=25%  Similarity=0.394  Sum_probs=57.4

Q ss_pred             CCceEEEEc-CCCC----EEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQ----VIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~----~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.. .++.    .+++|.+... .......+.+|+..+..+.|+|++++++.+.... .+++++++++|+|.++
T Consensus        28 ~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~  106 (327)
T 3poz_A           28 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDY  106 (327)
T ss_dssp             TEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHH
T ss_pred             CeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHH
Confidence            789999984 3443    4688887633 2344567889999999999999999999987654 7789999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       107 l~~~  110 (327)
T 3poz_A          107 VREH  110 (327)
T ss_dssp             HHHS
T ss_pred             HHhc
Confidence            8764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.16  E-value=6.9e-10  Score=58.94  Aligned_cols=74  Identities=22%  Similarity=0.327  Sum_probs=57.3

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhc--CCCCcccceeeeeeeC----CceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAK--PQHTNIVRLIGCSLHG----PERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~----~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++... +..+|+|.+...   .......+..++..  +.|+|++++.+.+...    ...++++|++++|+|.++
T Consensus        50 ~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~  125 (337)
T 3mdy_A           50 YGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDY  125 (337)
T ss_dssp             TEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHH
T ss_pred             CeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHH
Confidence            6889999864 889999998532   23344445555544  4899999999988766    678999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       126 l~~~  129 (337)
T 3mdy_A          126 LKST  129 (337)
T ss_dssp             HHHC
T ss_pred             hhcc
Confidence            8754

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.16  E-value=1.9e-10  Score=66.36  Aligned_cols=78  Identities=18%  Similarity=0.194  Sum_probs=63.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.++..   .......+..|..++..+ +|++++.+.+.+...+.+++++||+++|+|..++
T Consensus       354 fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l  433 (674)
T 3pfq_A          354 FGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI  433 (674)
T ss_dssp             TBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHH
T ss_pred             CEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHH
Confidence            789999994 46889999998632   112334567788888876 7999999999999999999999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       434 ~~~  436 (674)
T 3pfq_A          434 QQV  436 (674)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            753

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.16  E-value=3.8e-10  Score=62.13  Aligned_cols=78  Identities=13%  Similarity=0.103  Sum_probs=63.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeC-----CceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG-----PERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. .++..+|+|.+...  .......+.+|+.+++.+.|+|++++++.+...     ..+++++|++. |+|.
T Consensus        39 ~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~  117 (432)
T 3n9x_A           39 YGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLK  117 (432)
T ss_dssp             TEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHH
T ss_pred             CEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHH
Confidence            688999984 46889999999743  223345788999999999999999999988665     56899999886 5999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      .++....
T Consensus       118 ~~~~~~~  124 (432)
T 3n9x_A          118 KLFKTPI  124 (432)
T ss_dssp             HHHHSSC
T ss_pred             HHHhccC
Confidence            9887654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.15  E-value=2.9e-10  Score=61.44  Aligned_cols=77  Identities=17%  Similarity=0.176  Sum_probs=60.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC------ceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP------ERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~l~~e~~~~g~l   71 (86)
                      ||.||.+.. .++..+|+|.+....  ......+.+|+..++.+.|+|++++.+.+....      ..++++|++ +++|
T Consensus        38 ~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L  116 (367)
T 1cm8_A           38 YGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDL  116 (367)
T ss_dssp             --CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEH
T ss_pred             CeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCH
Confidence            688999984 578999999986432  223456789999999999999999999886553      458999999 7799


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      ..++...
T Consensus       117 ~~~~~~~  123 (367)
T 1cm8_A          117 GKLMKHE  123 (367)
T ss_dssp             HHHHHHC
T ss_pred             HHHHhcC
Confidence            9888764

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.15  E-value=2.5e-10  Score=61.14  Aligned_cols=77  Identities=21%  Similarity=0.308  Sum_probs=60.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCccc-----HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQG-----IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+.. .++..+|+|.+.......     ...+.+|+.++..+.|+|++++++.+......++++|++++ +|..+
T Consensus        23 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~  101 (346)
T 1ua2_A           23 FATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVI  101 (346)
T ss_dssp             TEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHH
T ss_pred             CEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHH
Confidence            688999985 468899999996432111     23577899999999999999999999989999999999976 78887


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       102 ~~~~  105 (346)
T 1ua2_A          102 IKDN  105 (346)
T ss_dssp             HTTC
T ss_pred             HHhc
Confidence            7654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.14  E-value=3.7e-10  Score=62.42  Aligned_cols=78  Identities=12%  Similarity=0.167  Sum_probs=58.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeC-----CceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG-----PERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. .++..+|+|.+...  .......+.+|+.++..+.|+|++++++.+...     ..+++++|++ +|+|.
T Consensus        66 ~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~  144 (458)
T 3rp9_A           66 YGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFK  144 (458)
T ss_dssp             --CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEEHH
T ss_pred             CeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEecc-ccchh
Confidence            789999984 47889999998643  223345688999999999999999999988433     5689999987 56898


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      .++....
T Consensus       145 ~~~~~~~  151 (458)
T 3rp9_A          145 KLFRTPV  151 (458)
T ss_dssp             HHHHSSC
T ss_pred             hhcccCC
Confidence            8887653

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.13  E-value=1.1e-10  Score=63.17  Aligned_cols=76  Identities=16%  Similarity=0.138  Sum_probs=56.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHH---HHhcCCCCccccee-------eeeeeCC---------
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAK---VIAKPQHTNIVRLI-------GCSLHGP---------   57 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~---~~~~~~~~~i~~~~-------~~~~~~~---------   57 (86)
                      ||.||++.. .++..+|+|.+...   .......+.+|+.   .++.+.|||+++++       +.+..++         
T Consensus        86 ~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (377)
T 3byv_A           86 PYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRL  165 (377)
T ss_dssp             TEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC--
T ss_pred             CEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCcccccccc
Confidence            688999994 56899999999632   3334567888984   55556899999887       4443332         


Q ss_pred             --------ceEEEEeccCCCChhhhhcc
Q 038959           58 --------ERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus        58 --------~~~l~~e~~~~g~l~~~l~~   77 (86)
                              ..++++|++ +|+|.+++..
T Consensus       166 ~~~~~~i~~~~lv~E~~-~g~L~~~l~~  192 (377)
T 3byv_A          166 DERDMWVLSRFFLYPRM-QSNLQTFGEV  192 (377)
T ss_dssp             ----CEEESEEEEEECC-SEEHHHHHHH
T ss_pred             CCCceEEEEEEEEEecc-CCCHHHHHHh
Confidence                    378999999 6799998875

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.13  E-value=4.8e-10  Score=58.89  Aligned_cols=76  Identities=16%  Similarity=0.162  Sum_probs=58.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC----cccHHHHHHHHHHHhcCCCCcccceeeee--eeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT----SQGIVEFKNEAKVIAKPQHTNIVRLIGCS--LHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.. .++..+++|.+....    ......+.+|+..+..+.|+|++++.+.+  ......++++|++.++ +.+
T Consensus        18 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~   96 (305)
T 2wtk_C           18 YGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQE   96 (305)
T ss_dssp             SCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHH
T ss_pred             CeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHH
Confidence            688999984 468899999986321    23345788999999999999999999987  3456789999999876 666


Q ss_pred             hhcc
Q 038959           74 FIFG   77 (86)
Q Consensus        74 ~l~~   77 (86)
                      ++..
T Consensus        97 ~~~~  100 (305)
T 2wtk_C           97 MLDS  100 (305)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            6554

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.13  E-value=5.1e-10  Score=58.54  Aligned_cols=75  Identities=29%  Similarity=0.421  Sum_probs=59.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++...  ..+++|.+....  ......+.+|+..++.+.|+|++.+.+.. .....++++|++++++|.+++...
T Consensus        37 ~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~  113 (289)
T 3og7_A           37 FGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHAS  113 (289)
T ss_dssp             SEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC
T ss_pred             CeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhc
Confidence            6889998753  359999987443  23345788999999999999999999854 556688999999999999988644

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.13  E-value=6.3e-10  Score=58.68  Aligned_cols=77  Identities=25%  Similarity=0.424  Sum_probs=58.2

Q ss_pred             CCceEEEEcC----CCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC-----ceEEEEeccCCC
Q 038959            1 GSSLLQGKLP----DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP-----ERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~~----~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~l~~e~~~~g   69 (86)
                      ||.||++...    .+..+|+|.+....  ......+.+|+..+..+.|+|++++.+.+....     ..++++|++++|
T Consensus        47 ~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~  126 (313)
T 3brb_A           47 FGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYG  126 (313)
T ss_dssp             CCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTC
T ss_pred             CeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCC
Confidence            6889999742    34479999987432  233456889999999999999999999886543     458999999999


Q ss_pred             Chhhhhcc
Q 038959           70 SLDFFIFG   77 (86)
Q Consensus        70 ~l~~~l~~   77 (86)
                      +|..++..
T Consensus       127 ~L~~~l~~  134 (313)
T 3brb_A          127 DLHTYLLY  134 (313)
T ss_dssp             BHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99998853

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.12  E-value=7.1e-11  Score=62.73  Aligned_cols=77  Identities=21%  Similarity=0.301  Sum_probs=59.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCccc-HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQG-IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+.. .++..+|+|.+....... ...+.+|+..++.+.|+|++++.+.+......++++|+++ |+|.+++...
T Consensus        15 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~   93 (324)
T 3mtl_A           15 YATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDC   93 (324)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHT
T ss_pred             CEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhc
Confidence            688999985 478899999986432111 1134568889999999999999999999999999999997 5888877654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.12  E-value=2.6e-11  Score=64.57  Aligned_cols=76  Identities=13%  Similarity=0.013  Sum_probs=54.0

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCC--------cccHHHHHHHHHHHhcCC---------CCcccceeeee----------
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRT--------SQGIVEFKNEAKVIAKPQ---------HTNIVRLIGCS----------   53 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~----------   53 (86)
                      ||.||++.. ++..+|+|.+....        ......+.+|+.+++.+.         |+|++.+.+.+          
T Consensus        33 ~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~i  111 (336)
T 2vuw_A           33 FGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLL  111 (336)
T ss_dssp             TEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHH
T ss_pred             ceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHH
Confidence            788999986 67899999997432        223356777777776654         66666665542          


Q ss_pred             -------ee-------------CCceEEEEeccCCCChhhhhcc
Q 038959           54 -------LH-------------GPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus        54 -------~~-------------~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                             ..             ....++++|++++|++.+.+.+
T Consensus       112 v~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~  155 (336)
T 2vuw_A          112 LKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT  155 (336)
T ss_dssp             HHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT
T ss_pred             HHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh
Confidence                   22             6789999999999977766644

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.12  E-value=1.2e-09  Score=59.36  Aligned_cols=77  Identities=22%  Similarity=0.297  Sum_probs=59.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCC-CCcccceeeeeeeCC--ceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGP--ERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~--~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+. ..++..+|+|.+...  .........+|+..+..+. |+|++++++.+...+  .+++++|+++ |+|..+
T Consensus        22 ~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~  100 (388)
T 3oz6_A           22 YGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAV  100 (388)
T ss_dssp             --CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHH
Confidence            78999998 457899999998643  2234456788999999886 999999999986543  6899999997 588888


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       101 ~~~~  104 (388)
T 3oz6_A          101 IRAN  104 (388)
T ss_dssp             HHHT
T ss_pred             HHcC
Confidence            8764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.12  E-value=1.1e-09  Score=57.92  Aligned_cols=77  Identities=23%  Similarity=0.120  Sum_probs=58.6

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCC--cccHHHHHHHHHHHhc-CCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++... ++..+|+|.+....  .........++..+.. ..|+|++++.+.+...+..++++|++ +++|.+++.
T Consensus        70 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~  148 (311)
T 3p1a_A           70 YGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCE  148 (311)
T ss_dssp             TEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHH
T ss_pred             CeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHH
Confidence            7899999854 78999999986432  2223345555555544 48999999999999999999999999 668888776


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       149 ~~  150 (311)
T 3p1a_A          149 AW  150 (311)
T ss_dssp             HH
T ss_pred             hc
Confidence            43

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.11  E-value=3.8e-10  Score=60.60  Aligned_cols=77  Identities=23%  Similarity=0.239  Sum_probs=59.8

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCc-----------ccHHHHHHHHHHHhcCCCCcccceeeeeee-----CCceEEEEe
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTS-----------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLH-----GPERILVYE   64 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~l~~e   64 (86)
                      ||.||.+....+..+|+|.+.....           .....+.+|+..+..+.|+|++++.+.+..     ....++++|
T Consensus        35 ~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e  114 (362)
T 3pg1_A           35 YGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE  114 (362)
T ss_dssp             TEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEE
T ss_pred             CEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEc
Confidence            6889999866789999999853211           112578899999999999999999998743     335799999


Q ss_pred             ccCCCChhhhhccC
Q 038959           65 FMPNKSLDFFIFGR   78 (86)
Q Consensus        65 ~~~~g~l~~~l~~~   78 (86)
                      +++ |+|.+.+...
T Consensus       115 ~~~-~~l~~~~~~~  127 (362)
T 3pg1_A          115 LMR-TDLAQVIHDQ  127 (362)
T ss_dssp             CCS-EEHHHHHHCT
T ss_pred             cCC-CCHHHHHHhc
Confidence            997 5788777654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.11  E-value=9.1e-10  Score=57.31  Aligned_cols=77  Identities=22%  Similarity=0.312  Sum_probs=60.8

Q ss_pred             CCceEEEEcCC----CCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLPD----GQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~~----~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+....    +..+++|.+... .......+.+|+..++.+.|+|++++.+.+.. +..++++|++++++|.+++
T Consensus        25 ~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l  103 (281)
T 3cc6_A           25 FGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYL  103 (281)
T ss_dssp             SSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHH
T ss_pred             CeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHH
Confidence            68899997421    335899998754 23345678899999999999999999998754 4568999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       104 ~~~  106 (281)
T 3cc6_A          104 ERN  106 (281)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            653

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.11  E-value=6.5e-11  Score=63.64  Aligned_cols=78  Identities=17%  Similarity=0.155  Sum_probs=62.2

Q ss_pred             CCceEEEEc----CCCCEEEEEEecCCC----cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL----PDGQVIAVKRLSGRT----SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~----~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l   71 (86)
                      ||.||++..    .++..+|+|.++...    ......+..|+.++..+ +|+|++.+.+.+......++++|++++|+|
T Consensus        67 ~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  146 (355)
T 1vzo_A           67 YGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL  146 (355)
T ss_dssp             TEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred             CEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCH
Confidence            788999984    368899999986321    12233456677778777 799999999999999999999999999999


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      .+++...
T Consensus       147 ~~~l~~~  153 (355)
T 1vzo_A          147 FTHLSQR  153 (355)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHc
Confidence            9988754

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.10  E-value=3.4e-10  Score=60.01  Aligned_cols=76  Identities=21%  Similarity=0.194  Sum_probs=59.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCcccceeeeee--------eCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSL--------HGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~--------~~~~~~l~~e~~~~g~   70 (86)
                      ||.||.+.. .++..+|+|.+..........+..|+..+..+. |+|++++++.+.        .....++++|++. |+
T Consensus        41 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~  119 (337)
T 3ll6_A           41 FAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQ  119 (337)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EE
T ss_pred             ceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-CC
Confidence            688999984 478999999986544445567888999999885 999999998873        2344789999985 68


Q ss_pred             hhhhhcc
Q 038959           71 LDFFIFG   77 (86)
Q Consensus        71 l~~~l~~   77 (86)
                      |.+++..
T Consensus       120 L~~~l~~  126 (337)
T 3ll6_A          120 LVEFLKK  126 (337)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8887764

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.09  E-value=7.9e-11  Score=67.95  Aligned_cols=79  Identities=15%  Similarity=0.155  Sum_probs=64.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeee------CCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH------GPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. .++..+|+|.+... .......+.+|+.++..+.|+|++++.+.+..      .+..++++|++++|+|.
T Consensus        27 fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~  106 (676)
T 3qa8_A           27 FGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLR  106 (676)
T ss_dssp             SSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHH
T ss_pred             CeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHH
Confidence            688998884 46889999998743 33345578899999999999999999887644      66789999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++....
T Consensus       107 ~~L~~~~  113 (676)
T 3qa8_A          107 KYLNQFE  113 (676)
T ss_dssp             HHHHSSS
T ss_pred             HHHHhcc
Confidence            9988643

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.09  E-value=9.5e-10  Score=60.61  Aligned_cols=75  Identities=16%  Similarity=0.144  Sum_probs=59.9

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||+||.....++..+|+|.+..   .....+.+|+.++..+ .|||++++++.+......++++|++. |+|.+++....
T Consensus        28 ~g~V~~~~~~~g~~vAvK~~~~---~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~  103 (434)
T 2rio_A           28 SGTVVFQGSFQGRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKN  103 (434)
T ss_dssp             TTCEEEEEESSSSEEEEEEEEG---GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC-
T ss_pred             CeEEEEEEEECCeEEEEEEEcH---HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccC
Confidence            6888755445689999999853   2334567888888865 89999999999988999999999995 69999987653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.08  E-value=3.4e-10  Score=60.14  Aligned_cols=77  Identities=23%  Similarity=0.384  Sum_probs=58.7

Q ss_pred             CCceEEEEc-CCCC----EEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQ----VIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~----~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.. .++.    .+++|.+.... ......+..|+..+..+.|+|++++++.+. .+..+++++++++|+|.++
T Consensus        26 ~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~  104 (325)
T 3kex_A           26 FGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDH  104 (325)
T ss_dssp             SCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHH
T ss_pred             CceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHH
Confidence            789999984 3444    37888875332 122235667888899999999999999875 5668899999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       105 l~~~  108 (325)
T 3kex_A          105 VRQH  108 (325)
T ss_dssp             HHSS
T ss_pred             HHHc
Confidence            8754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.07  E-value=1e-09  Score=57.40  Aligned_cols=75  Identities=19%  Similarity=0.214  Sum_probs=62.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+. ..++..+|+|.+....  ....+.+|+..+..+ +|++++.+.+.+......++++|++ +++|.+++...
T Consensus        23 ~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~   99 (298)
T 1csn_A           23 FGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLC   99 (298)
T ss_dssp             SCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT
T ss_pred             CEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHh
Confidence            68899998 4578899999986432  223567788888887 7999999999999999999999999 99999998754

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.07  E-value=1.5e-09  Score=58.10  Aligned_cols=77  Identities=18%  Similarity=0.267  Sum_probs=61.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeC-----CceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG-----PERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.. .++..+|+|.+.... ......+.+|+..+..+.|+|++++.+.+...     ...++++|++. |+|..
T Consensus        24 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~  102 (353)
T 2b9h_A           24 YGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHR  102 (353)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHH
T ss_pred             CeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHH
Confidence            688999984 468899999997433 23345678899999999999999999887543     67899999996 58888


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus       103 ~~~~~  107 (353)
T 2b9h_A          103 VISTQ  107 (353)
T ss_dssp             HHHHC
T ss_pred             HHhhc
Confidence            87654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.06  E-value=1.3e-09  Score=56.82  Aligned_cols=76  Identities=26%  Similarity=0.340  Sum_probs=56.7

Q ss_pred             CCceEEEEcC--CCC--EEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP--DGQ--VIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~--~~~--~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.+.  .+.  .+++|.++...   ......+.+|+..+..+.|+|++++++.+..+. .++++|++++++|.+
T Consensus        31 ~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~  109 (291)
T 1u46_A           31 FGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLD  109 (291)
T ss_dssp             -CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHH
T ss_pred             ceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHH
Confidence            6889999742  333  58999886432   233457889999999999999999999887654 789999999999999


Q ss_pred             hhcc
Q 038959           74 FIFG   77 (86)
Q Consensus        74 ~l~~   77 (86)
                      ++..
T Consensus       110 ~l~~  113 (291)
T 1u46_A          110 RLRK  113 (291)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8865

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.06  E-value=2.1e-09  Score=57.24  Aligned_cols=77  Identities=25%  Similarity=0.394  Sum_probs=61.1

Q ss_pred             CCceEEEEc-CCCC----EEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQ----VIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~----~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++.. .++.    .+++|.+... .......+.+|+..+..+.|+|++++++.+.... .+++++++++|+|.++
T Consensus        28 ~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~  106 (327)
T 3lzb_A           28 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDY  106 (327)
T ss_dssp             SEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHH
T ss_pred             CeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHH
Confidence            688999984 3444    4578877543 3345668899999999999999999999887654 7889999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       107 l~~~  110 (327)
T 3lzb_A          107 VREH  110 (327)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            8754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.06  E-value=3.2e-09  Score=56.87  Aligned_cols=76  Identities=20%  Similarity=0.249  Sum_probs=59.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeee--------CCceEEEEeccCCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--------GPERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~l~~e~~~~g   69 (86)
                      ||.||.+.. .++..+|+|.+....  ......+.+|+.++..+.|+|++++.+.+..        .+..++++|++++ 
T Consensus        30 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-  108 (351)
T 3mi9_A           30 FGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-  108 (351)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSE-
T ss_pred             CcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCC-
Confidence            689999984 578999999986432  2234467889999999999999999998866        3468899999975 


Q ss_pred             Chhhhhcc
Q 038959           70 SLDFFIFG   77 (86)
Q Consensus        70 ~l~~~l~~   77 (86)
                      ++...+..
T Consensus       109 ~l~~~l~~  116 (351)
T 3mi9_A          109 DLAGLLSN  116 (351)
T ss_dssp             EHHHHHHC
T ss_pred             CHHHHHhh
Confidence            66666654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.05  E-value=2.9e-09  Score=56.93  Aligned_cols=74  Identities=19%  Similarity=0.135  Sum_probs=55.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHH-HHhcCCCCcccceeeeeee----CCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAK-VIAKPQHTNIVRLIGCSLH----GPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~----~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||.+.. .++..+|+|.+....     ....++. .+..+.|+|++++.+.+..    ....++++|++++|+|.++
T Consensus        42 ~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~  116 (336)
T 3fhr_A           42 NGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSR  116 (336)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHH
Confidence            688999984 478999999986421     1222222 3455789999999998765    4458899999999999999


Q ss_pred             hccCC
Q 038959           75 IFGRS   79 (86)
Q Consensus        75 l~~~~   79 (86)
                      +....
T Consensus       117 l~~~~  121 (336)
T 3fhr_A          117 IQERG  121 (336)
T ss_dssp             HHTC-
T ss_pred             HHhcC
Confidence            98653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.05  E-value=8e-10  Score=60.30  Aligned_cols=73  Identities=18%  Similarity=0.236  Sum_probs=57.0

Q ss_pred             CCceEEEEcC---CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeee--eCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP---DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSL--HGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++...   .+..+|+|.+....  ....+.+|+.++..+.|+|++++++.+.  .....++++|++.+ +|..++
T Consensus        34 ~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~  110 (405)
T 3rgf_A           34 YGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHII  110 (405)
T ss_dssp             --EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHH
T ss_pred             CeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHH
Confidence            7899999843   57789999997432  2346788999999999999999999884  46789999999864 777766


Q ss_pred             c
Q 038959           76 F   76 (86)
Q Consensus        76 ~   76 (86)
                      .
T Consensus       111 ~  111 (405)
T 3rgf_A          111 K  111 (405)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.05  E-value=2e-09  Score=58.20  Aligned_cols=75  Identities=19%  Similarity=0.129  Sum_probs=59.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC------ceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP------ERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~l~~e~~~~g~l   71 (86)
                      ||.||.+. ..++..+|+|.+....  ......+.+|+..++.+.|+|++++.+.+....      ..++++|++++ +|
T Consensus        38 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l  116 (371)
T 2xrw_A           38 QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NL  116 (371)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EH
T ss_pred             CEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCCC-CH
Confidence            68899998 4468899999997432  233456788999999999999999999886554      68999999975 67


Q ss_pred             hhhhc
Q 038959           72 DFFIF   76 (86)
Q Consensus        72 ~~~l~   76 (86)
                      .+.+.
T Consensus       117 ~~~~~  121 (371)
T 2xrw_A          117 CQVIQ  121 (371)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            77765

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.05  E-value=2.7e-09  Score=55.62  Aligned_cols=75  Identities=21%  Similarity=0.229  Sum_probs=55.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc-ccHHHHHH-HHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS-QGIVEFKN-EAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~-~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.+..... ........ +...++.+.|+|++++.+.+...+..++++|+++ |+|.+++.
T Consensus        20 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~   97 (290)
T 3fme_A           20 YGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYK   97 (290)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EEHHHHHH
T ss_pred             CeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cchHHHHH
Confidence            688999984 5788999999975422 22223333 3345677899999999999999999999999997 47776664

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.04  E-value=1.2e-09  Score=60.77  Aligned_cols=75  Identities=20%  Similarity=0.159  Sum_probs=58.4

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeC------CceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG------PERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+. ..++..+|+|.+...  .......+.+|+.+++.+.|+|++++++.+...      ..+++++|+++++ +
T Consensus        75 ~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~-l  153 (464)
T 3ttj_A           75 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-L  153 (464)
T ss_dssp             SCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE-H
T ss_pred             CeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCC-H
Confidence            78999998 457889999999743  223345678999999999999999999988654      3569999999764 6


Q ss_pred             hhhhc
Q 038959           72 DFFIF   76 (86)
Q Consensus        72 ~~~l~   76 (86)
                      ...+.
T Consensus       154 ~~~~~  158 (464)
T 3ttj_A          154 CQVIQ  158 (464)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            55554

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.04  E-value=2.2e-09  Score=57.86  Aligned_cols=78  Identities=14%  Similarity=0.096  Sum_probs=61.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeC-----CceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG-----PERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||.+.. .++..+|+|.+.... ......+.+|+.++..+.|+|++++.+.+..+     ...++++|++. |+|.+
T Consensus        40 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~  118 (364)
T 3qyz_A           40 YGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYK  118 (364)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHH
T ss_pred             CeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC-cCHHH
Confidence            688999984 468899999997433 23345788999999999999999999988654     36889999997 58888


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++....
T Consensus       119 ~l~~~~  124 (364)
T 3qyz_A          119 LLKTQH  124 (364)
T ss_dssp             HHHHCC
T ss_pred             HHHhCC
Confidence            887553

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.04  E-value=2.5e-09  Score=56.79  Aligned_cols=75  Identities=23%  Similarity=0.313  Sum_probs=58.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-cccHHHHHHHHH-HHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-SQGIVEFKNEAK-VIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.+.... ......+..+.. .++.+.|+|++++++.+...+..++++|++++ +|.+++.
T Consensus        35 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~  112 (327)
T 3aln_A           35 YGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYK  112 (327)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHH
T ss_pred             CEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHH
Confidence            688999985 468899999997543 223334556665 66678999999999999999999999999975 7766654

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.04  E-value=1.4e-09  Score=58.85  Aligned_cols=77  Identities=19%  Similarity=0.208  Sum_probs=56.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeC------CceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG------PERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~l~~e~~~~g~l   71 (86)
                      ||.||.+. ..++..+|+|.+...  .......+.+|+..++.+.|+|++++.+.+...      ...+++++++ +++|
T Consensus        42 ~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L  120 (367)
T 2fst_X           42 YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL  120 (367)
T ss_dssp             -CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEEC
T ss_pred             CeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCH
Confidence            68999998 457889999998643  223345678999999999999999999987543      5678999988 6788


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      ..++...
T Consensus       121 ~~~~~~~  127 (367)
T 2fst_X          121 NNIVKCQ  127 (367)
T ss_dssp             C-----C
T ss_pred             HHHHhcC
Confidence            8887653

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.04  E-value=1.8e-09  Score=56.99  Aligned_cols=78  Identities=22%  Similarity=0.264  Sum_probs=63.5

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCC--CCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQ--HTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++....+..+|+|.+....  ......+.+|+..+..+.  |+|++++.+.+...+..++++| +.+++|.+++.
T Consensus        41 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~  119 (313)
T 3cek_A           41 SSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK  119 (313)
T ss_dssp             SEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHH
T ss_pred             CEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHH
Confidence            688999987678899999996432  233456888999888875  5999999999999999999999 66889999987


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       120 ~~~  122 (313)
T 3cek_A          120 KKK  122 (313)
T ss_dssp             HCS
T ss_pred             hcC
Confidence            653

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.03  E-value=7.7e-10  Score=62.91  Aligned_cols=70  Identities=17%  Similarity=0.170  Sum_probs=58.0

Q ss_pred             CCCEEEEEEecCCC----------cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959           11 DGQVIAVKRLSGRT----------SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus        11 ~~~~~~~k~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      .|..+++|.+....          ..+...+.+|+.+++.+ .|+|++.+++.+.....++++|||++|++|.++|....
T Consensus       258 fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~  337 (569)
T 4azs_A          258 FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE  337 (569)
T ss_dssp             ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC
T ss_pred             ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC
Confidence            47788999986321          12234688999999998 79999999999999999999999999999999998654


Q ss_pred             C
Q 038959           80 F   80 (86)
Q Consensus        80 ~   80 (86)
                      .
T Consensus       338 ~  338 (569)
T 4azs_A          338 E  338 (569)
T ss_dssp             C
T ss_pred             C
Confidence            3

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.02  E-value=2.1e-09  Score=58.08  Aligned_cols=75  Identities=21%  Similarity=0.196  Sum_probs=59.6

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCce------EEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER------ILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------~l~~e~~~~g~l   71 (86)
                      ||.||.+. ..++..+|+|.+....  ......+.+|+..++.+.|+|++++.+.+...+..      ++++|++. ++|
T Consensus        55 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l  133 (371)
T 4exu_A           55 YGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDL  133 (371)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEH
T ss_pred             CeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-ccH
Confidence            68899998 4468899999997432  22345678899999999999999999998766554      89999997 577


Q ss_pred             hhhhc
Q 038959           72 DFFIF   76 (86)
Q Consensus        72 ~~~l~   76 (86)
                      ...+.
T Consensus       134 ~~~~~  138 (371)
T 4exu_A          134 QKIMG  138 (371)
T ss_dssp             HHHTT
T ss_pred             HHHhh
Confidence            77664

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.01  E-value=7.5e-09  Score=54.54  Aligned_cols=79  Identities=16%  Similarity=0.257  Sum_probs=57.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC-----cccHHHHHHHHHHHhcC---CCCcccceeeeeeeCC-----ceEEEEecc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT-----SQGIVEFKNEAKVIAKP---QHTNIVRLIGCSLHGP-----ERILVYEFM   66 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~-----~~~l~~e~~   66 (86)
                      ||.||++.. .++..+|+|.+....     ......+.+|+..+..+   .|+|++++++.+....     ..++++|++
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~  101 (308)
T 3g33_A           22 YGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV  101 (308)
T ss_dssp             SCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECC
T ss_pred             CeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhh
Confidence            789999994 578999999986211     11123455666655544   5999999999987654     478999999


Q ss_pred             CCCChhhhhccCCC
Q 038959           67 PNKSLDFFIFGRSF   80 (86)
Q Consensus        67 ~~g~l~~~l~~~~~   80 (86)
                      . |+|.+++.....
T Consensus       102 ~-~~L~~~~~~~~~  114 (308)
T 3g33_A          102 D-QDLRTYLDKAPP  114 (308)
T ss_dssp             C-CBHHHHHHTCCT
T ss_pred             h-cCHHHHHhhccC
Confidence            7 599998876543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.00  E-value=1.7e-10  Score=60.95  Aligned_cols=77  Identities=14%  Similarity=0.292  Sum_probs=61.9

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||.+....  .+++|.+....  ......+.+|+..+..+.|+|++++.+.+...+..++++|++++++|.+++...
T Consensus        46 ~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~  123 (319)
T 2y4i_B           46 FGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDA  123 (319)
T ss_dssp             SSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSS
T ss_pred             ceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhc
Confidence            68899998543  48999986432  122235667888899999999999999999999999999999999999999765


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus       124 ~  124 (319)
T 2y4i_B          124 K  124 (319)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.00  E-value=2.9e-09  Score=57.73  Aligned_cols=71  Identities=15%  Similarity=0.226  Sum_probs=54.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeee------------------------
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH------------------------   55 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------------   55 (86)
                      ||.||.+. ..++..+|+|.+.....    ...+|+.+++.+.|+|++++.+.+..                        
T Consensus        20 fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (383)
T 3eb0_A           20 FGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNG   95 (383)
T ss_dssp             CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----------------------
T ss_pred             CEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccc
Confidence            78999998 45789999999864321    12368889999999999999988743                        


Q ss_pred             --------------CCceEEEEeccCCCChhhhhc
Q 038959           56 --------------GPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus        56 --------------~~~~~l~~e~~~~g~l~~~l~   76 (86)
                                    ....++++|+++ |+|.+.+.
T Consensus        96 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~  129 (383)
T 3eb0_A           96 VNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLK  129 (383)
T ss_dssp             --------------CCEEEEEECCCS-EEHHHHHH
T ss_pred             cccccccccccCCCceEEEEEEecCC-ccHHHHHH
Confidence                          234789999998 47766654

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.99  E-value=2.7e-09  Score=57.22  Aligned_cols=75  Identities=21%  Similarity=0.183  Sum_probs=58.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCc------eEEEEeccCCCCh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPE------RILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------~~l~~e~~~~g~l   71 (86)
                      ||.||.+.. .++..+|+|.+....  ......+.+|+..+..+.|+|++++.+.+.....      .++++|++. ++|
T Consensus        37 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l  115 (353)
T 3coi_A           37 YGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDL  115 (353)
T ss_dssp             SEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEG
T ss_pred             CeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-CCH
Confidence            688999984 468899999996432  2224567889999999999999999998876543      489999997 577


Q ss_pred             hhhhc
Q 038959           72 DFFIF   76 (86)
Q Consensus        72 ~~~l~   76 (86)
                      ..++.
T Consensus       116 ~~~~~  120 (353)
T 3coi_A          116 QKIMG  120 (353)
T ss_dssp             GGTTT
T ss_pred             HHHhc
Confidence            77664

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.99  E-value=3.3e-10  Score=59.74  Aligned_cols=78  Identities=21%  Similarity=0.239  Sum_probs=55.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc------cHHHHHHHHHHHhcC----CCCcccceeeeeeeCCceEEEEec-cCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ------GIVEFKNEAKVIAKP----QHTNIVRLIGCSLHGPERILVYEF-MPN   68 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~------~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~l~~e~-~~~   68 (86)
                      ||.||.+.. .++..+++|.++.....      ....+..|+..+..+    .|+|++++.+.+...+..++++++ +.+
T Consensus        44 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~  123 (312)
T 2iwi_A           44 FGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPA  123 (312)
T ss_dssp             TEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSE
T ss_pred             CEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCC
Confidence            688999984 57889999999643221      112344566666665    899999999999888889999999 788


Q ss_pred             CChhhhhccC
Q 038959           69 KSLDFFIFGR   78 (86)
Q Consensus        69 g~l~~~l~~~   78 (86)
                      ++|.+++...
T Consensus       124 ~~L~~~l~~~  133 (312)
T 2iwi_A          124 QDLFDYITEK  133 (312)
T ss_dssp             EEHHHHHHHH
T ss_pred             CCHHHHHHhc
Confidence            9999988754

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.99  E-value=3.6e-09  Score=56.27  Aligned_cols=76  Identities=30%  Similarity=0.377  Sum_probs=54.6

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHH--HhcCCCCcccceeeeeee-----CCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKV--IAKPQHTNIVRLIGCSLH-----GPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~-----~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++.. ++..+|+|.+...   ....+..+..+  +..+.|+|++++++.+..     ....++++|++++|+|.+
T Consensus        26 ~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~  101 (336)
T 3g2f_A           26 YGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXK  101 (336)
T ss_dssp             SEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHH
T ss_pred             CeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHH
Confidence            688999975 5789999998632   23334444433  445799999999875432     335689999999999999


Q ss_pred             hhccCCC
Q 038959           74 FIFGRSF   80 (86)
Q Consensus        74 ~l~~~~~   80 (86)
                      ++.....
T Consensus       102 ~l~~~~~  108 (336)
T 3g2f_A          102 YLSLHTS  108 (336)
T ss_dssp             HHHHCCB
T ss_pred             HHhhccc
Confidence            9875543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.95  E-value=1.1e-08  Score=56.54  Aligned_cols=75  Identities=15%  Similarity=0.243  Sum_probs=58.0

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.|+.....++..||+|.+......   ...+|+.+++.+ .|+|++++++.+......++++|+++ |+|.+++....
T Consensus        37 ~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~  112 (432)
T 3p23_A           37 EGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKD  112 (432)
T ss_dssp             GGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSS
T ss_pred             CEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcC
Confidence            56754433446889999998653322   245788888887 79999999999999999999999996 59999887654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.95  E-value=1.2e-08  Score=56.19  Aligned_cols=78  Identities=12%  Similarity=0.141  Sum_probs=59.1

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC------CCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP------QHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++. ..++..+|+|.++... .....+..|+.++..+      .|+|++.+.+.+......++++|++. ++|.+
T Consensus       110 fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~  187 (429)
T 3kvw_A          110 FGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYE  187 (429)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHHH
T ss_pred             cEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-CCHHH
Confidence            78999998 4468899999997432 2233455566555543      67899999999999999999999996 68988


Q ss_pred             hhccCCC
Q 038959           74 FIFGRSF   80 (86)
Q Consensus        74 ~l~~~~~   80 (86)
                      ++.....
T Consensus       188 ~l~~~~~  194 (429)
T 3kvw_A          188 LIKKNKF  194 (429)
T ss_dssp             HHHHTTT
T ss_pred             HHHhccC
Confidence            8876543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.94  E-value=5e-09  Score=59.33  Aligned_cols=76  Identities=9%  Similarity=0.018  Sum_probs=58.4

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCccc--------HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQG--------IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||++.. .+..+++|.........        .+.+.+|+.+++.++|+|++.+.......+..++++|++++++|.
T Consensus       349 fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~  427 (540)
T 3en9_A          349 EADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAK  427 (540)
T ss_dssp             CEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHH
T ss_pred             CEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHH
Confidence            688999954 46778888765332111        234789999999999999996666666777789999999999999


Q ss_pred             hhhcc
Q 038959           73 FFIFG   77 (86)
Q Consensus        73 ~~l~~   77 (86)
                      +++..
T Consensus       428 ~~l~~  432 (540)
T 3en9_A          428 DVIED  432 (540)
T ss_dssp             HHSTT
T ss_pred             HHHHH
Confidence            98764

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.94  E-value=3.1e-09  Score=56.90  Aligned_cols=77  Identities=12%  Similarity=-0.070  Sum_probs=57.8

Q ss_pred             CCceEEEEcC----CCCEEEEEEecCCCccc-----------HHHHHHHHHHHhcCCCCcccceeeeeee----CCceEE
Q 038959            1 GSSLLQGKLP----DGQVIAVKRLSGRTSQG-----------IVEFKNEAKVIAKPQHTNIVRLIGCSLH----GPERIL   61 (86)
Q Consensus         1 fg~v~~~~~~----~~~~~~~k~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~l   61 (86)
                      ||.||++...    .+..+++|.........           ...+..++..+..+.|+|++++++.+..    ....++
T Consensus        50 ~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~l  129 (345)
T 2v62_A           50 FGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFM  129 (345)
T ss_dssp             --CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEE
T ss_pred             CeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCCCcEEEE
Confidence            6899999853    56789999987442211           1234566777888999999999998876    678999


Q ss_pred             EEeccCCCChhhhhccC
Q 038959           62 VYEFMPNKSLDFFIFGR   78 (86)
Q Consensus        62 ~~e~~~~g~l~~~l~~~   78 (86)
                      ++|++ +++|.+++...
T Consensus       130 v~e~~-~~~L~~~l~~~  145 (345)
T 2v62_A          130 VMERL-GIDLQKISGQN  145 (345)
T ss_dssp             EEECE-EEEHHHHCBGG
T ss_pred             EEecc-CCCHHHHHHhc
Confidence            99999 99999998754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.92  E-value=3.9e-09  Score=55.91  Aligned_cols=78  Identities=21%  Similarity=0.297  Sum_probs=55.7

Q ss_pred             CCceEEEEc--CCCCEEEEEEecCCC--cccHHHHHHHHHHHhc---CCCCcccceeeeee-----eCCceEEEEeccCC
Q 038959            1 GSSLLQGKL--PDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAK---PQHTNIVRLIGCSL-----HGPERILVYEFMPN   68 (86)
Q Consensus         1 fg~v~~~~~--~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~-----~~~~~~l~~e~~~~   68 (86)
                      ||.||.+..  .++..+|+|.+....  ......+.+|+..++.   +.|+|++++++.+.     .....++++|++. 
T Consensus        24 ~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-  102 (326)
T 1blx_A           24 YGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-  102 (326)
T ss_dssp             TEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-
T ss_pred             cEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-
Confidence            688999985  357789999986321  1112234455555554   48999999999876     4567889999997 


Q ss_pred             CChhhhhccCC
Q 038959           69 KSLDFFIFGRS   79 (86)
Q Consensus        69 g~l~~~l~~~~   79 (86)
                      |+|.+++....
T Consensus       103 ~~L~~~l~~~~  113 (326)
T 1blx_A          103 QDLTTYLDKVP  113 (326)
T ss_dssp             CBHHHHHHHSC
T ss_pred             CCHHHHHHhcc
Confidence            69999887643

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.89  E-value=6.6e-09  Score=56.23  Aligned_cols=76  Identities=14%  Similarity=0.189  Sum_probs=56.4

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC--------CCcccceeeeee----eCCceEEEEeccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ--------HTNIVRLIGCSL----HGPERILVYEFMP   67 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~~~~~~----~~~~~~l~~e~~~   67 (86)
                      ||.||++. ..++..+|+|.+... ......+.+|+.++..+.        |+|++++++.+.    .....++++|++ 
T Consensus        50 ~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-  127 (397)
T 1wak_A           50 FSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-  127 (397)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-
T ss_pred             CeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEecc-
Confidence            68899998 456889999999643 233456778888877663        778999998876    456789999999 


Q ss_pred             CCChhhhhccC
Q 038959           68 NKSLDFFIFGR   78 (86)
Q Consensus        68 ~g~l~~~l~~~   78 (86)
                      ++++...+...
T Consensus       128 ~~~l~~~~~~~  138 (397)
T 1wak_A          128 GHHLLKWIIKS  138 (397)
T ss_dssp             CCBHHHHHHHT
T ss_pred             CccHHHHHHhc
Confidence            55666665543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.89  E-value=3e-08  Score=52.34  Aligned_cols=74  Identities=16%  Similarity=0.243  Sum_probs=52.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcc-cHHHHHHH-HHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQ-GIVEFKNE-AKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||.+.. .++..+|+|.+...... .......+ ...+..+.|+|++++++.+...+..++++|++ ++.+..+.
T Consensus        38 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~  114 (318)
T 2dyl_A           38 CGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLK  114 (318)
T ss_dssp             --CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHH
T ss_pred             CeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHH
Confidence            688999985 47889999999754322 22233333 34567789999999999999999999999999 44444443

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.89  E-value=1.2e-08  Score=54.12  Aligned_cols=77  Identities=17%  Similarity=0.144  Sum_probs=59.0

Q ss_pred             CCceEEEEc-C-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCC------CcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-P-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQH------TNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. . ++..+|+|.++.. ......+.+|+..+..+.|      ++++.+.+.+...+..++++|++ +++|.
T Consensus        27 ~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~  104 (339)
T 1z57_A           27 FGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTY  104 (339)
T ss_dssp             TEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             CeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHH
Confidence            688999974 3 5788999998643 2334456777777766544      45889999999999999999999 88999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++....
T Consensus       105 ~~l~~~~  111 (339)
T 1z57_A          105 DFIKENG  111 (339)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhcC
Confidence            9887654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.88  E-value=2e-09  Score=57.75  Aligned_cols=72  Identities=18%  Similarity=0.159  Sum_probs=54.4

Q ss_pred             CCceEEEEcC---------CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccc---------------eeeeeee-
Q 038959            1 GSSLLQGKLP---------DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVR---------------LIGCSLH-   55 (86)
Q Consensus         1 fg~v~~~~~~---------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------------~~~~~~~-   55 (86)
                      ||.||.+...         .+..+|+|.+...     ..+.+|+..+..+.|+|+++               +.+.+.. 
T Consensus        55 ~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~  129 (352)
T 2jii_A           55 QGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQ  129 (352)
T ss_dssp             TEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEET
T ss_pred             CeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccC
Confidence            6889999854         3778999998643     25678888888888988876               4455544 


Q ss_pred             CCceEEEEeccCCCChhhhhccC
Q 038959           56 GPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus        56 ~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ....++++|++ +++|.+++...
T Consensus       130 ~~~~~lv~e~~-~~~L~~~l~~~  151 (352)
T 2jii_A          130 DKYRFLVLPSL-GRSLQSALDVS  151 (352)
T ss_dssp             TTEEEEEEECC-CEEHHHHHHHS
T ss_pred             CcEEEEEecCC-CcCHHHHHHhC
Confidence            67889999999 99999999764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.86  E-value=1.6e-08  Score=54.70  Aligned_cols=75  Identities=8%  Similarity=0.026  Sum_probs=45.8

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc---ccHHHHHHHH---HHHhcCCCCccccee-------eeeeeC----------
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS---QGIVEFKNEA---KVIAKPQHTNIVRLI-------GCSLHG----------   56 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~---~~~~~~~~~~---~~~~~~~~~~i~~~~-------~~~~~~----------   56 (86)
                      ||.||.+.. .++..+|+|.+.....   .....+..|.   ..++. .|||+++.+       +.+..+          
T Consensus        75 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~  153 (371)
T 3q60_A           75 RSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSP  153 (371)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTSCSSSBCSC
T ss_pred             CEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccC
Confidence            688999984 4788999999986432   2233456664   45555 799977754       333322          


Q ss_pred             -------CceEEEEeccCCCChhhhhcc
Q 038959           57 -------PERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus        57 -------~~~~l~~e~~~~g~l~~~l~~   77 (86)
                             ...++++|+++ |+|.+++..
T Consensus       154 ~~~~~~~~~~~lv~e~~~-~~L~~~l~~  180 (371)
T 3q60_A          154 GQDDYAVANYLLLMPAAS-VDLELLFST  180 (371)
T ss_dssp             C---CCEEEEEEEECCCS-EEHHHHHHH
T ss_pred             CcccceeeeEEEEecCCC-CCHHHHHHH
Confidence                   33799999998 899999875

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.85  E-value=1.5e-08  Score=54.38  Aligned_cols=72  Identities=22%  Similarity=0.198  Sum_probs=49.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCc-------eEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPE-------RILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------~~l~~e~~~~g~l~   72 (86)
                      ||.||++.. .++..+|+|.+.... ........++..+..+.|+|++++.+.+...+.       .++++|++++ ++.
T Consensus        36 ~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~  113 (360)
T 3e3p_A           36 FGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLH  113 (360)
T ss_dssp             ---CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHH
Confidence            689999985 468899999885432 122244556666777899999999998865333       7899999976 444


Q ss_pred             hh
Q 038959           73 FF   74 (86)
Q Consensus        73 ~~   74 (86)
                      ..
T Consensus       114 ~~  115 (360)
T 3e3p_A          114 RC  115 (360)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.85  E-value=1.4e-08  Score=54.72  Aligned_cols=77  Identities=12%  Similarity=0.069  Sum_probs=55.9

Q ss_pred             CCceEEEEcCC------CCEEEEEEecCCCcccH-----------HHHHHHHHHHhcCCCCcccceeeeeeeC----Cce
Q 038959            1 GSSLLQGKLPD------GQVIAVKRLSGRTSQGI-----------VEFKNEAKVIAKPQHTNIVRLIGCSLHG----PER   59 (86)
Q Consensus         1 fg~v~~~~~~~------~~~~~~k~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~   59 (86)
                      ||.||++....      +..+|+|.+........           .....++..+..+.|+|++++++.+...    ...
T Consensus        48 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~  127 (364)
T 3op5_A           48 FGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYR  127 (364)
T ss_dssp             CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEE
T ss_pred             CeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccCCcceE
Confidence            78999998543      46899999875432111           1123345566778999999999987654    458


Q ss_pred             EEEEeccCCCChhhhhccC
Q 038959           60 ILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus        60 ~l~~e~~~~g~l~~~l~~~   78 (86)
                      ++++|++ +++|.+++...
T Consensus       128 ~lv~e~~-g~~L~~~~~~~  145 (364)
T 3op5_A          128 FMIMDRF-GSDLQKIYEAN  145 (364)
T ss_dssp             EEEEECE-EEEHHHHHHHT
T ss_pred             EEEEeCC-CCCHHHHHHhc
Confidence            9999999 99999998754

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.82  E-value=6.5e-08  Score=50.58  Aligned_cols=74  Identities=19%  Similarity=0.171  Sum_probs=57.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeee-eeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCS-LHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+.. .++..+|+|.+......  ..+..|...+..+.|++.+.....+ ......++++|++ +++|.+++..
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~   97 (296)
T 3uzp_A           22 FGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNF   97 (296)
T ss_dssp             TEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred             CeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHh
Confidence            688999984 57889999998643322  3577888889988887766665555 5677889999999 8899999873

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.79  E-value=1.2e-08  Score=54.92  Aligned_cols=77  Identities=18%  Similarity=0.216  Sum_probs=58.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-----------CCcccceeeeeeeCC----ceEEEEe
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-----------HTNIVRLIGCSLHGP----ERILVYE   64 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~----~~~l~~e   64 (86)
                      ||.||.+.. .++..+|+|.+... ......+..|+..+..+.           |+|++++.+.+...+    ..++++|
T Consensus        32 ~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e  110 (373)
T 1q8y_A           32 FSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFE  110 (373)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEEC
T ss_pred             CeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEe
Confidence            688999984 57889999998642 233445677777776654           789999998886543    6889999


Q ss_pred             ccCCCChhhhhccCC
Q 038959           65 FMPNKSLDFFIFGRS   79 (86)
Q Consensus        65 ~~~~g~l~~~l~~~~   79 (86)
                      ++ +++|.+++....
T Consensus       111 ~~-~~~L~~~~~~~~  124 (373)
T 1q8y_A          111 VL-GENLLALIKKYE  124 (373)
T ss_dssp             CC-CEEHHHHHHHTT
T ss_pred             cC-CCCHHHHHHHhh
Confidence            98 889999887643

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.77  E-value=4.8e-08  Score=53.73  Aligned_cols=71  Identities=24%  Similarity=0.276  Sum_probs=52.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeC------CceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG------PERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++.. .++..+|+|.+.....    ...+|+.+++.+.|+|++++.+.+...      ..+++++|++++ ++..
T Consensus        67 fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~  141 (420)
T 1j1b_A           67 FGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYR  141 (420)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHH
T ss_pred             CEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHH
Confidence            789999995 4689999999864321    223688899999999999998887432      236789999976 5555


Q ss_pred             hhc
Q 038959           74 FIF   76 (86)
Q Consensus        74 ~l~   76 (86)
                      .+.
T Consensus       142 ~~~  144 (420)
T 1j1b_A          142 VAR  144 (420)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.76  E-value=4e-08  Score=51.34  Aligned_cols=74  Identities=19%  Similarity=0.201  Sum_probs=55.6

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeee-eeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCS-LHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||.+. ..++..+|+|.+......  ..+..|...+..+.|++.+.....+ ......++++|++ +++|.+++..
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~   97 (296)
T 4hgt_A           22 FGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNF   97 (296)
T ss_dssp             SSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred             CeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHH
Confidence            68999998 457889999987543211  2467788888888777766666555 5677889999999 8899998874

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.76  E-value=7e-08  Score=52.39  Aligned_cols=77  Identities=14%  Similarity=0.159  Sum_probs=57.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-CC-----cccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-HT-----NIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++.. .++..+|+|.++... .....+..|...+..+. |+     +++.+.+.+...+..++++|+++ |+|.+
T Consensus        67 ~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~  144 (382)
T 2vx3_A           67 FGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-YNLYD  144 (382)
T ss_dssp             TEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC-CBHHH
T ss_pred             CEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC-CCHHH
Confidence            689999984 468899999997432 22334556666665542 33     58888899988999999999996 59999


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++....
T Consensus       145 ~l~~~~  150 (382)
T 2vx3_A          145 LLRNTN  150 (382)
T ss_dssp             HHHHTT
T ss_pred             HHhhcC
Confidence            887654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.74  E-value=8.9e-08  Score=53.71  Aligned_cols=74  Identities=19%  Similarity=0.204  Sum_probs=56.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCC-CcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQH-TNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++. ..++..+|+|.+......  ..+..|..++..+.| +++..+..........++++|++ +++|.+++..
T Consensus        20 fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~   95 (483)
T 3sv0_A           20 FGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF   95 (483)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred             CEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHh
Confidence            78999998 457899999988643222  246788888888866 44555555556778889999999 8899999874

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.72  E-value=3.8e-08  Score=51.70  Aligned_cols=69  Identities=16%  Similarity=0.043  Sum_probs=51.0

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCc------------------ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEE
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTS------------------QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILV   62 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~   62 (86)
                      ||.||.+...++..+|+|.++....                  .....+.+|+.++..+.  | +.+.+.+. .+..+++
T Consensus       103 ~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~-~~~~~lv  178 (282)
T 1zar_A          103 ESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA-WEGNAVL  178 (282)
T ss_dssp             SEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE-EETTEEE
T ss_pred             CceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe-ccceEEE
Confidence            6789999886688999999964321                  12346788999999887  4 55555443 3556999


Q ss_pred             EeccCCCChhh
Q 038959           63 YEFMPNKSLDF   73 (86)
Q Consensus        63 ~e~~~~g~l~~   73 (86)
                      +|++++|+|.+
T Consensus       179 mE~~~g~~L~~  189 (282)
T 1zar_A          179 MELIDAKELYR  189 (282)
T ss_dssp             EECCCCEEGGG
T ss_pred             EEecCCCcHHH
Confidence            99999999987

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.72  E-value=9.1e-08  Score=51.09  Aligned_cols=77  Identities=13%  Similarity=0.085  Sum_probs=56.0

Q ss_pred             CCceEEEEc-CCC-CEEEEEEecCCCcccHHHHHHHHHHHhcCCCCc------ccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL-PDG-QVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTN------IVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~-~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~------i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||.+.. ..+ ..+|+|.++.. ......+..|+..+..+.|++      ++.+.+.+...+..++++|++ ++++.
T Consensus        32 ~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~  109 (355)
T 2eu9_A           32 FGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTF  109 (355)
T ss_dssp             TEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             CeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCChH
Confidence            688999984 344 68999999643 233456677777777665544      777888888889999999999 56777


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +.+....
T Consensus       110 ~~l~~~~  116 (355)
T 2eu9_A          110 EFLKENN  116 (355)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhcc
Confidence            7666543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.71  E-value=6.6e-09  Score=55.14  Aligned_cols=78  Identities=19%  Similarity=0.195  Sum_probs=59.9

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcc------cHHHHHHHHHHHhcCC--CCcccceeeeeeeCCceEEEEeccCC-CC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQ------GIVEFKNEAKVIAKPQ--HTNIVRLIGCSLHGPERILVYEFMPN-KS   70 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~------~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~l~~e~~~~-g~   70 (86)
                      ||.||.+. ..++..+|+|.+......      ....+..|+.++..+.  |+|++++.+.+..++..++++|++.+ ++
T Consensus        56 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~  135 (320)
T 3a99_A           56 FGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD  135 (320)
T ss_dssp             SCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEE
T ss_pred             CeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCcc
Confidence            68999998 457889999998632111      1123556777777764  69999999999999999999999876 88


Q ss_pred             hhhhhccC
Q 038959           71 LDFFIFGR   78 (86)
Q Consensus        71 l~~~l~~~   78 (86)
                      |.+++...
T Consensus       136 L~~~l~~~  143 (320)
T 3a99_A          136 LFDFITER  143 (320)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhcc
Confidence            99888753

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.71  E-value=6.8e-08  Score=52.73  Aligned_cols=66  Identities=21%  Similarity=0.263  Sum_probs=48.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCC------ceEEEEeccCCCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP------ERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~l~~e~~~~g~   70 (86)
                      ||.||.+....+..+++|.+.....    ...+|+.+++.+.|+|++++.+.+....      ..++++|+++++.
T Consensus        53 ~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l  124 (394)
T 4e7w_A           53 FGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETV  124 (394)
T ss_dssp             TEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEH
T ss_pred             CeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccH
Confidence            7899999865555588887753221    1236888899999999999999885433      2789999997643

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.85  E-value=2.9e-05  Score=40.30  Aligned_cols=71  Identities=17%  Similarity=0.177  Sum_probs=44.8

Q ss_pred             CCceEEEEc-CCCCE--EEEEEecCCCcc------------------------cHHHHHHHHHHHhcCCCCcc--cceee
Q 038959            1 GSSLLQGKL-PDGQV--IAVKRLSGRTSQ------------------------GIVEFKNEAKVIAKPQHTNI--VRLIG   51 (86)
Q Consensus         1 fg~v~~~~~-~~~~~--~~~k~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~i--~~~~~   51 (86)
                      ||.||.+.. .+|..  +|+|.++.....                        ....+.+|...+..+.|+++  .....
T Consensus        60 ~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~  139 (258)
T 1zth_A           60 EANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYT  139 (258)
T ss_dssp             SEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCCCCEEE
T ss_pred             eEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence            688999986 57888  999987532111                        01256778888888766653  22222


Q ss_pred             eeeeCCceEEEEeccCC-C----Chhhhh
Q 038959           52 CSLHGPERILVYEFMPN-K----SLDFFI   75 (86)
Q Consensus        52 ~~~~~~~~~l~~e~~~~-g----~l~~~l   75 (86)
                          ....+++|||+.+ |    .|.+..
T Consensus       140 ----~~~~~lVmE~~g~~g~~~~~L~~~~  164 (258)
T 1zth_A          140 ----YMKNVLLMEFIGEDELPAPTLVELG  164 (258)
T ss_dssp             ----EETTEEEEECCEETTEECCBHHHHG
T ss_pred             ----cCCCEEEEEecCCCCCccccHHHHh
Confidence                1356899999942 3    565544

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.61  E-value=3.7e-05  Score=42.49  Aligned_cols=21  Identities=14%  Similarity=0.050  Sum_probs=18.2

Q ss_pred             CCceEEEEcCCCCEEEEEEec
Q 038959            1 GSSLLQGKLPDGQVIAVKRLS   21 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~   21 (86)
                      ||.||.+....|..+|+|.++
T Consensus       108 ~a~VY~a~d~~G~~vAvKi~r  128 (397)
T 4gyi_A          108 ESDIMIVADEKGKQKVLKIHR  128 (397)
T ss_dssp             SEEEEEEECTTCCEEEEEEEC
T ss_pred             ceEEEEEECCCCCEEEEEEEe
Confidence            578999987789999999875

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.61  E-value=0.00019  Score=39.61  Aligned_cols=43  Identities=14%  Similarity=0.084  Sum_probs=32.3

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQH   43 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~   43 (86)
                      ||.||++. ..++..+|+|.+.....   .....+.+|..++..+.|
T Consensus        91 fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           91 PYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             TEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             CEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            78999999 55799999999873322   224568888888888866

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.52  E-value=0.00043  Score=35.75  Aligned_cols=71  Identities=7%  Similarity=-0.029  Sum_probs=49.6

Q ss_pred             ceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            3 SLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         3 ~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      .||+... .+..+++|............+.+|...+..+. +..+.++++.....+..++++++++|.++...
T Consensus        29 ~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~  100 (263)
T 3tm0_A           29 KVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             EEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             eEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhc
Confidence            4666653 36788999886321122234677777777663 56677778777778889999999999888765

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.07  E-value=0.0016  Score=33.39  Aligned_cols=68  Identities=15%  Similarity=0.149  Sum_probs=44.6

Q ss_pred             CceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCc--ccceeeeeeeCCceEEEEeccCCCChh
Q 038959            2 SSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTN--IVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         2 g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      +.||+....+|..+++|......   ...+..|...++.+.+.+  +.+++.....++..+++++++++.++.
T Consensus        34 ~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           34 AAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             CEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             ceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence            45677665556778999876431   124556666666553223  455666666667789999999987774

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.04  E-value=0.061  Score=28.30  Aligned_cols=68  Identities=19%  Similarity=0.127  Sum_probs=40.1

Q ss_pred             CceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            2 SSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         2 g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      +.+|+....+|..+.+|............+..|...++.+....-+.....+.. +..++++|++..+.
T Consensus        29 ~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~-~~~~lv~e~l~~~~   96 (288)
T 3f7w_A           29 WHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW-DDRTLAMEWVDERP   96 (288)
T ss_dssp             EEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE-ETTEEEEECCCCCC
T ss_pred             eEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec-cCceEEEEeecccC
Confidence            357777777889999998765443334467778877776633221222222222 22467888887654

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=94.93  E-value=0.1  Score=28.32  Aligned_cols=70  Identities=11%  Similarity=0.177  Sum_probs=41.1

Q ss_pred             CceEEEEcCCCCEEEEEEec--CCC-cccHHHHHHHHHHHhcCC--CCcccceeeeeeeC---CceEEEEeccCCCChh
Q 038959            2 SSLLQGKLPDGQVIAVKRLS--GRT-SQGIVEFKNEAKVIAKPQ--HTNIVRLIGCSLHG---PERILVYEFMPNKSLD   72 (86)
Q Consensus         2 g~v~~~~~~~~~~~~~k~~~--~~~-~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~---~~~~l~~e~~~~g~l~   72 (86)
                      +.+|..... +..+.+|...  ... ......+.+|..++..+.  +..+.+++..+...   +..++++|++++..+.
T Consensus        52 n~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~  129 (359)
T 3dxp_A           52 NPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLW  129 (359)
T ss_dssp             SCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCC
T ss_pred             ceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecC
Confidence            345655543 3566777654  221 122335677888777765  34466667766554   4588999999987663

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=94.05  E-value=0.29  Score=25.28  Aligned_cols=68  Identities=9%  Similarity=-0.014  Sum_probs=44.5

Q ss_pred             eEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            4 LLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         4 v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      +|+-... .+..+.+|....   .....+..|...+..+. +..+.+++..+..++..+++|+++++.++...
T Consensus        41 v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~  110 (272)
T 4gkh_A           41 IYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV  110 (272)
T ss_dssp             EEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred             EEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence            4544322 345677777543   23345677877777653 33456677777788889999999998776654

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=86.74  E-value=0.076  Score=30.21  Aligned_cols=54  Identities=6%  Similarity=-0.004  Sum_probs=12.0

Q ss_pred             CCceEEEEcCC-CCEEEE------EEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeee
Q 038959            1 GSSLLQGKLPD-GQVIAV------KRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSL   54 (86)
Q Consensus         1 fg~v~~~~~~~-~~~~~~------k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   54 (86)
                      ||.|++|.+.. ...||+      |.......  .....+.++...+....|+|+++.+.+..
T Consensus       152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            78899998643 346666      65543221  12234666777777788999988876643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	86
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-16
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-15
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-15
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-14
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-14
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-14
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	8e-14
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-13
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-13
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-13
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-13
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-13
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-13
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	7e-13
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	9e-13
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-12
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-12
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-12
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-12
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-11
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-11
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-11
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-11
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-11
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	8e-11
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	8e-11
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-10
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-10
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-10
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-10
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-09
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-09
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	9e-09
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-08
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-08
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-07
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-07
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	7e-07
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-06
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-06
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-06
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-05
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-04

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (164), Expect = 7e-16
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 7   GKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
           G   +   +A+K +    +    +F  EA+V+ K  H  +V+L G  L      LV+EFM
Sbjct: 24  GYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 82

Query: 67  PNKSLDFFIFGRSFSTFE 84
            +  L  ++  +      
Sbjct: 83  EHGCLSDYLRTQRGLFAA 100

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 2e-15
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 7  GKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
          GK      +A+K +    S    EF  EAKV+    H  +V+L G         ++ E+M
Sbjct: 23 GKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 81

Query: 67 PNKSLDFFIFGR 78
           N  L  ++   
Sbjct: 82 ANGCLLNYLREM 93

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 6e-15
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 2/88 (2%)

Query: 1   GSSLLQGKLPDGQVIAVKRLSGRTSQGIVE-FKNEAKVIAK-PQHTNIVRLIGCSLHGPE 58
            ++    K      +AVK L         E   +E KV++    H NIV L+G    G  
Sbjct: 42  ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101

Query: 59  RILVYEFMPNKSLDFFIFGRSFSTFETK 86
            +++ E+     L  F+  +  S   +K
Sbjct: 102 TLVITEYCCYGDLLNFLRRKRDSFICSK 129

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 2e-14
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 11  DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERI-LVYEFMPNK 69
            G  +AVK +  +       F  EA V+ + +H+N+V+L+G  +     + +V E+M   
Sbjct: 29  RGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 86

Query: 70  SLDFFIFGRSFSTFETK 86
           SL  ++  R  S     
Sbjct: 87  SLVDYLRSRGRSVLGGD 103

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 2e-14
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 7   GKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
           G       +AVK L  + S     F  EA ++ + QH  +VRL       P   ++ E+M
Sbjct: 32  GYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYM 89

Query: 67  PNKSLDFFIFGRS 79
            N SL  F+   S
Sbjct: 90  ENGSLVDFLKTPS 102

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 4e-14
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 7  GKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
          GK      + +  ++  T Q +  FKNE  V+ K +H NI+  +G S   P+  +V ++ 
Sbjct: 27 GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWC 85

Query: 67 PNKSLDFFIFGR 78
             SL   +   
Sbjct: 86 EGSSLYHHLHII 97

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 5e-14
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 11  DGQVIAVKRLSGRTSQGIVE-FKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK 69
               +A+K L   T +   E    EA+++ +  +  IVRLIG        +LV E     
Sbjct: 35  KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV-CQAEALMLVMEMAGGG 93

Query: 70  SLDFFIFGR 78
            L  F+ G+
Sbjct: 94  PLHKFLVGK 102

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 6e-14
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 9  LPDGQVIAVKRLSGRTSQGIVE-FKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP 67
           P G V+A K +       I      E +V+ +     IV   G      E  +  E M 
Sbjct: 28 KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 87

Query: 68 NKSLDFFIFGRS 79
            SLD  +    
Sbjct: 88 GGSLDQVLKKAG 99

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.3 bits (151), Expect = 8e-14
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 9   LPDGQVIAVKRLSGRTSQG---IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
           + + +V+A+K++S    Q      +   E + + K +H N ++  GC L      LV E+
Sbjct: 37  VRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96

Query: 66  MPNKSLDFFIFGR 78
               + D     +
Sbjct: 97  CLGSASDLLEVHK 109

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.8 bits (149), Expect = 1e-13
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)

Query: 8   KLPDGQVIAVKRLSGRTSQGIV-EFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
                 ++AVK L    S  +  +F+ EA ++A+  + NIV+L+G    G    L++E+M
Sbjct: 39  PYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYM 98

Query: 67  PNKSLDFFIFGRSFSTF 83
               L+ F+   S  T 
Sbjct: 99  AYGDLNEFLRSMSPHTV 115

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (148), Expect = 2e-13
 Identities = 12/71 (16%), Positives = 30/71 (42%)

Query: 9   LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
                + A K +  ++ + + ++  E  ++A   H NIV+L+    +     ++ EF   
Sbjct: 34  KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 93

Query: 69  KSLDFFIFGRS 79
            ++D  +    
Sbjct: 94  GAVDAVMLELE 104

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (148), Expect = 2e-13
 Identities = 16/79 (20%), Positives = 34/79 (43%)

Query: 8   KLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP 67
            +  GQ +A+++++ +         NE  V+ + ++ NIV  +   L G E  +V E++ 
Sbjct: 41  DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100

Query: 68  NKSLDFFIFGRSFSTFETK 86
             SL   +        +  
Sbjct: 101 GGSLTDVVTETCMDEGQIA 119

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 3e-13
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 7   GKLPDGQVIAVKRLSGRTSQG-IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
            K      +A+K ++   S    +EF NEA V+ +    ++VRL+G    G   +++ E 
Sbjct: 45  VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 104

Query: 66  MPNKSLDFFIF 76
           M    L  ++ 
Sbjct: 105 MTRGDLKSYLR 115

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 4e-13
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 7   GKLPDGQVIAVKRLSGRTSQGIVE-FKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYE 64
            K      +AVK L  +      E   +E K++ +   H NIV L+G         L++E
Sbjct: 62  SKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 121

Query: 65  FMPNKSLDFFIFGRSFSTFE 84
           +     L  ++  +     E
Sbjct: 122 YCCYGDLLNYLRSKREKFSE 141

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 60.1 bits (145), Expect = 5e-13
 Identities = 13/70 (18%), Positives = 24/70 (34%)

Query: 9   LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
              G   A K +           + E + ++  +H  +V L        E +++YEFM  
Sbjct: 48  RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 107

Query: 69  KSLDFFIFGR 78
             L   +   
Sbjct: 108 GELFEKVADE 117

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 59.7 bits (144), Expect = 7e-13
 Identities = 14/72 (19%), Positives = 26/72 (36%)

Query: 9   LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
              G+V   K ++          KNE  ++ +  H  ++ L        E +L+ EF+  
Sbjct: 51  KATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG 110

Query: 69  KSLDFFIFGRSF 80
             L   I    +
Sbjct: 111 GELFDRIAAEDY 122

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 9e-13
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 7   GKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
           G       +A+K L    +     F  EA+V+ K +H  +V+L       P   +V E+M
Sbjct: 36  GTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYM 93

Query: 67  PNKSLDFFIFGRS 79
              SL  F+ G +
Sbjct: 94  SKGSLLDFLKGET 106

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.9 bits (142), Expect = 1e-12
 Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)

Query: 9   LPDGQVIAVKRLSGRTSQGIVE-FKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP 67
               +++A+K ++ +  +G     +NE  V+ K +H NIV L      G    L+ + + 
Sbjct: 31  KRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 90

Query: 68  NKSLDFFIFGRSFSTFET 85
              L   I  + F T   
Sbjct: 91  GGELFDRIVEKGFYTERD 108

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.8 bits (139), Expect = 3e-12
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 11  DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
               +AVK L    +  + EF  EA V+ + +H N+V+L+G     P   ++ EFM   +
Sbjct: 41  YSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 99

Query: 71  LDFFIFGRSFSTFE 84
           L  ++   +     
Sbjct: 100 LLDYLRECNRQEVS 113

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.5 bits (138), Expect = 4e-12
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 11  DGQVIAVKRL-SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK 69
               +A+K L SG T +   +F +EA ++ +  H N++ L G        +++ EFM N 
Sbjct: 53  REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENG 112

Query: 70  SLDFFIFGR 78
           SLD F+   
Sbjct: 113 SLDSFLRQN 121

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 5e-12
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 11  DGQVIAVKRLSGRTSQGIV--EFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPN 68
             + +AVK L    +   +  E   EA V+ +  +  IVR+IG        +LV E    
Sbjct: 33  VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAEL 91

Query: 69  KSLDFFIFGR 78
             L+ ++   
Sbjct: 92  GPLNKYLQQN 101

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 1e-11
 Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 8   KLPDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYE 64
           +L   +  A+K L  R       +     E  V+++  H   V+L        +      
Sbjct: 29  ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS 88

Query: 65  FMPNKSLDFFIF 76
           +  N  L  +I 
Sbjct: 89  YAKNGELLKYIR 100

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 2e-11
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 11  DGQVIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP 67
               +AVK L        + + +F  E   +    H N++RL G  L  P ++ V E  P
Sbjct: 35  KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAP 93

Query: 68  NKSLDFFIFGR 78
             SL   +   
Sbjct: 94  LGSLLDRLRKH 104

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 2e-11
 Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 8  KLPDGQVIAVKRLSGRTSQGIVE-FKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
               + +AVK +  + +    E  K E  +     H N+V+  G    G  + L  E+ 
Sbjct: 26 NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 85

Query: 67 PNKSLDFFIFGR 78
              L   I   
Sbjct: 86 SGGELFDRIEPD 97

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 2e-11
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 13  QVIAVKRLSGRTS-QGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYEFMPNKS 70
              A+KR+    S     +F  E +V+ K   H NI+ L+G   H     L  E+ P+ +
Sbjct: 38  MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN 97

Query: 71  LDFFIFGR 78
           L  F+   
Sbjct: 98  LLDFLRKS 105

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 2e-11
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 12  GQVIAVKRLSGRTSQGIVE-FKNEAKVIAKPQHTNIVRLIGCSLHGPERI-LVYEFMPNK 69
               AVK L+  T  G V  F  E  ++    H N++ L+G  L       +V  +M + 
Sbjct: 55  KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 114

Query: 70  SLDFFIFGRS 79
            L  FI   +
Sbjct: 115 DLRNFIRNET 124

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 2e-11
 Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 3   SLLQGKLPDGQVIAVKRL-SGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERI 60
            L + K      +AVK L S  T + + +  +E +++    +H NI+ L+G         
Sbjct: 36  GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 95

Query: 61  LVYEFMPNKSLDFFIFGR 78
           ++ E+    +L  ++  R
Sbjct: 96  VIVEYASKGNLREYLQAR 113

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 7e-11
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 8   KLPDGQVIAVKRL--SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERI--LVY 63
           +  DG+++  K L     T        +E  ++ + +H NIVR     +        +V 
Sbjct: 25  RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 84

Query: 64  EFMPNKSLDFFIFGRS 79
           E+     L   I   +
Sbjct: 85  EYCEGGDLASVITKGT 100

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 8e-11
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 11 DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGC----SLHGPERILVYEFM 66
           G+ +AVK  S R  +     + E       +H NI+  I      +    +  LV ++ 
Sbjct: 25 RGEEVAVKIFSSREERSW-FREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83

Query: 67 PNKSLDFFIFGRSFS 81
           + SL  ++   + +
Sbjct: 84 EHGSLFDYLNRYTVT 98

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 53.6 bits (128), Expect = 8e-11
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 9   LPDGQVIAVKRLSGRTSQG---IVEFKNEAKVIAKPQHTNIVRLIGC----SLHGPERIL 61
           L   + +AVK L    ++     + F+ EA+  A   H  IV +       +  GP   +
Sbjct: 29  LRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 88

Query: 62  VYEFMPNKSLDFFI 75
           V E++   +L   +
Sbjct: 89  VMEYVDGVTLRDIV 102

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 1e-10
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 11  DGQVIAVKRLSGRTSQGIVE-FKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNK 69
               +A+K     TS  + E F  EA  + +  H +IV+LIG     P   ++ E     
Sbjct: 34  PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLG 92

Query: 70  SLDFFIFGRSFS 81
            L  F+  R +S
Sbjct: 93  ELRSFLQVRKYS 104

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 3e-10
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 8  KLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP 67
          +    +    K +        V  K E  ++   +H NI+ L        E ++++EF+ 
Sbjct: 26 ETSSKKTYMAKFVK-VKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84

Query: 68 NKSLDFFIFGRSF 80
             +   I   +F
Sbjct: 85 GLDIFERINTSAF 97

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 52.2 bits (124), Expect = 3e-10
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 6  QGKLPDGQVIAVK--RLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVY 63
          + +   G+  A+K  RL             E  ++ + +H+NIV+L          +LV+
Sbjct: 20 KAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79

Query: 64 EFMPNKSLDFFIFGR 78
          E +            
Sbjct: 80 EHLDQDLKKLLDVCE 94

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 3e-10
 Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 11 DGQVIAVKRLS---GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMP 67
             ++A+K L       +    + + E ++ +  +H NI+RL G         L+ E+ P
Sbjct: 30 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 89

Query: 68 NKSLDFFI 75
            ++   +
Sbjct: 90 LGTVYREL 97

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 1e-09
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 5/73 (6%)

Query: 11 DGQVIAVKRLSGRTSQGIVE-----FKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
            Q++A+K++         +        E K++ +  H NI+ L+    H     LV++F
Sbjct: 22 TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81

Query: 66 MPNKSLDFFIFGR 78
          M            
Sbjct: 82 METDLEVIIKDNS 94

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.5 bits (120), Expect = 1e-09
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 6/77 (7%)

Query: 8   KLPDGQVIAVKRLS---GRTSQGIVEFKNE---AKVIAKPQHTNIVRLIGCSLHGPERIL 61
           K   G++ A+K L     +  QG     NE     +++      IV +        +   
Sbjct: 25  KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF 84

Query: 62  VYEFMPNKSLDFFIFGR 78
           + + M    L + +   
Sbjct: 85  ILDLMNGGDLHYHLSQH 101

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 2e-09
 Identities = 9/70 (12%), Positives = 27/70 (38%), Gaps = 1/70 (1%)

Query: 8  KLPDGQVIAVKRLSGRTSQGIVE-FKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
             +   +A+K++S    Q   +    E K++ + +H NI+ +           +   ++
Sbjct: 29 DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL 88

Query: 67 PNKSLDFFIF 76
              +   ++
Sbjct: 89 VTHLMGADLY 98

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 2e-09
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 6/77 (7%)

Query: 8   KLPDGQVIAVKRLSGRTSQG------IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERIL 61
           +   G   A K +  R ++         + + E  ++ + QH N++ L     +  + IL
Sbjct: 31  EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 90

Query: 62  VYEFMPNKSLDFFIFGR 78
           + E +    L  F+  +
Sbjct: 91  ILELVAGGELFDFLAEK 107

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-09
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 11  DGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER----ILVYE 64
               +A   L  R  T      FK EA+++   QH NIVR         +     +LV E
Sbjct: 33  TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 92

Query: 65  FMPNKSLDFFIFGR 78
            M + +L  ++   
Sbjct: 93  LMTSGTLKTYLKRF 106

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 2e-09
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)

Query: 4   LLQGKLPDGQVIAVKRLS-GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILV 62
           L          +A+K L  G T +  V+F  EA ++ +  H NI+RL G        +++
Sbjct: 28  LKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 87

Query: 63  YEFMPNKSLDFFIFGR 78
            E+M N +LD F+  +
Sbjct: 88  TEYMENGALDKFLREK 103

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.2 bits (114), Expect = 9e-09
 Identities = 10/73 (13%), Positives = 28/73 (38%), Gaps = 3/73 (4%)

Query: 9  LPDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
            +G+  A+K L        + +    +E  +++   H  I+R+ G      +  ++ ++
Sbjct: 26 RHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 85

Query: 66 MPNKSLDFFIFGR 78
          +    L   +   
Sbjct: 86 IEGGELFSLLRKS 98

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 1e-08
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 9  LPDGQVIAVK--RLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
             G+V+A+K  RL   T         E  ++ +  H NIV+L+       +  LV+EF+
Sbjct: 24 KLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83

Query: 67 PNKSLDFF 74
                F 
Sbjct: 84 HQDLKKFM 91

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 2e-08
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 1   GSSLLQGKLPDGQVIAVKRLS-GRTSQGIVEFKNEAKVIAKPQH-TNIVRLIGCSLH-GP 57
             +    K    + +AVK L  G T        +E K++    H  N+V L+G     G 
Sbjct: 32  ADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91

Query: 58  ERILVYEFMPNKSLDFFIFGR 78
             +++ EF    +L  ++  +
Sbjct: 92  PLMVIVEFCKFGNLSTYLRSK 112

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 4e-08
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 15  IAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF 73
           +A+K L   TS +   E  +EA V+A   + ++ RL+G  L    + L+ + MP   L  
Sbjct: 41  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 99

Query: 74  FIFGR 78
           ++   
Sbjct: 100 YVREH 104

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 4e-08
 Identities = 11/74 (14%), Positives = 22/74 (29%), Gaps = 4/74 (5%)

Query: 9  LPDGQVIAVKRLS---GRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPERILVYE 64
              Q  A+K L          +     E +V++   +H  +  +            V E
Sbjct: 24 KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME 83

Query: 65 FMPNKSLDFFIFGR 78
          ++    L + I   
Sbjct: 84 YLNGGDLMYHIQSC 97

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.8 bits (105), Expect = 1e-07
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 9  LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIG-CSLHGPERILVYEFMP 67
          +  G+ +A+K    +T     +   E+K+    Q    +  I  C   G   ++V E + 
Sbjct: 29 IAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG 86

Query: 68 NKSLDFFIFGR 78
              D F F  
Sbjct: 87 PSLEDLFNFCS 97

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 3e-07
 Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 8/79 (10%)

Query: 8   KLPDGQVIAVKRLS------GRTSQGIVEFKNEAKVIAK--PQHTNIVRLIGCSLHGPER 59
           ++ D   +A+K +                   E  ++ K     + ++RL+         
Sbjct: 25  RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF 84

Query: 60  ILVYEFMPNKSLDFFIFGR 78
           +L+ E        F     
Sbjct: 85  VLILERPEPVQDLFDFITE 103

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 43.3 bits (101), Expect = 4e-07
 Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 8/82 (9%)

Query: 8   KLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGCSLHGPER--ILVYE 64
            + + + + VK L     +   + K E K++       NI+ L         R   LV+E
Sbjct: 56  NITNNEKVVVKILKPVKKK---KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 112

Query: 65  FMPNKSLDFFIFGRSFSTFETK 86
            + N         ++ + ++ +
Sbjct: 113 HVNNTDFKQLY--QTLTDYDIR 132

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 5e-07
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 10/76 (13%)

Query: 9   LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPER------ILV 62
              G+++A+K++     Q       E +++ K  H NIVRL        E+       LV
Sbjct: 42  CDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97

Query: 63  YEFMPNKSLDFFIFGR 78
            +++P           
Sbjct: 98  LDYVPETVYRVARHYS 113

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 43.1 bits (101), Expect = 6e-07
 Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 10/78 (12%)

Query: 8   KLPDGQVIAVKRL--------SGRTSQGIVE-FKNEAKVIAK-PQHTNIVRLIGCSLHGP 57
             P  +  AVK +        S    Q + E    E  ++ K   H NI++L        
Sbjct: 24  HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 83

Query: 58  ERILVYEFMPNKSLDFFI 75
              LV++ M    L  ++
Sbjct: 84  FFFLVFDLMKKGELFDYL 101

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 7e-07
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 2/72 (2%)

Query: 9  LPDGQVIAVK--RLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFM 66
              +++A+K  RL             E  ++ + +H NIVRL        +  LV+EF 
Sbjct: 24 RETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83

Query: 67 PNKSLDFFIFGR 78
                +F    
Sbjct: 84 DQDLKKYFDSCN 95

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 7e-07
 Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 10/81 (12%)

Query: 8   KLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAK-PQHTNIVRLIGC----SLHGPERILV 62
                +  A+K L         + + E ++  +  Q  +IVR++             ++V
Sbjct: 33  NKRTQEKFALKMLQDCP-----KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 87

Query: 63  YEFMPNKSLDFFIFGRSFSTF 83
            E +    L   I  R    F
Sbjct: 88  MECLDGGELFSRIQDRGDQAF 108

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 1e-06
 Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 9   LPDGQVIAVKRL--SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERI------ 60
              GQ +A+K++          +    E K++   +H N+V LI                
Sbjct: 32  RKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS 91

Query: 61  --LVYEFMPNKSLDFFI 75
             LV++F  +       
Sbjct: 92  IYLVFDFCEHDLAGLLS 108

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 1e-06
 Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 8/79 (10%)

Query: 8   KLPDGQVIAVKRL--SGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP------ER 59
               G  +A+K+L    ++         E +++   +H N++ L+             + 
Sbjct: 39  DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 98

Query: 60  ILVYEFMPNKSLDFFIFGR 78
            LV  FM           +
Sbjct: 99  YLVMPFMGTDLGKLMKHEK 117

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 2e-06
 Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 3/70 (4%)

Query: 9  LPDGQVIAVKRLS---GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
             G+  A+K L          +     E++V+   +H  +  L            V E+
Sbjct: 27 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86

Query: 66 MPNKSLDFFI 75
               L F +
Sbjct: 87 ANGGELFFHL 96

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 4e-06
 Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 7/86 (8%)

Query: 8   KLPDGQVIAVKRLS--GRTSQGIVEFKNEAKVIAKPQHTNIVRLIGC-----SLHGPERI 60
               G  +AVK+LS   ++         E +++   +H N++ L+       SL     +
Sbjct: 39  DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 98

Query: 61  LVYEFMPNKSLDFFIFGRSFSTFETK 86
            +   +    L+  +  +  +    +
Sbjct: 99  YLVTHLMGADLNNIVKCQKLTDDHVQ 124

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 2e-05
 Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 10  PDGQVIAVKRLSGRT----SQGIVEFKNEAKVIAKPQHT-NIVRLIGCSLHGPERILVYE 64
             G++ A+K L   T    ++     + E +V+   + +  +V L        +  L+ +
Sbjct: 50  DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD 109

Query: 65  FMPNKSLDFFIFGR 78
           ++    L   +  R
Sbjct: 110 YINGGELFTHLSQR 123

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.5 bits (86), Expect = 5e-05
 Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 3/73 (4%)

Query: 9   LPDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEF 65
              G   A+K L  +     + I    NE +++       +V+L           +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122

Query: 66  MPNKSLDFFIFGR 78
           +    +   +   
Sbjct: 123 VAGGEMFSHLRRI 135

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 1e-04
 Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 10/87 (11%)

Query: 8   KLPDGQVIAVKRLSGRTSQG--IVEFKNEAKV---IAKPQHTNIVRLIGCSLHGPER--- 59
               G+ +A+KR+  +T +    +    E  V   +   +H N+VRL             
Sbjct: 29  LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 88

Query: 60  --ILVYEFMPNKSLDFFIFGRSFSTFE 84
              LV+E +      +           
Sbjct: 89  KLTLVFEHVDQDLTTYLDKVPEPGVPT 115

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	86
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.75
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.73
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.72
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.72
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.72
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.71
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.71
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.71
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.7
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.7
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.69
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.68
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.67
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.66
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.66
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.65
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.64
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.64
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.63
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.62
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.62
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.62
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.62
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.6
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.6
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.59
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.59
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.56
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.56
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.56
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.56
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.56
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.55
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.55
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.55
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.54
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.54
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.5
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.5
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.49
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.49
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.49
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.49
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.49
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.46
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.42
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.42
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.41
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.39
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.38
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.34
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.31
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.3
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.24
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.2
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.19
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.17
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.17
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.09
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.9
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.24
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.01
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	92.51
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	92.32

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.4e-17  Score=85.12  Aligned_cols=78  Identities=24%  Similarity=0.340  Sum_probs=68.9

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||+|.+.++..||+|.++... ...+.+.+|+..+..++|||++++++.+..++..++++||+++|+|.+++....
T Consensus        18 fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~   95 (263)
T d1sm2a_          18 FGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR   95 (263)
T ss_dssp             SCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTT
T ss_pred             CeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhccc
Confidence            799999998778889999997533 445689999999999999999999999999999999999999999999887653

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.5e-17  Score=85.39  Aligned_cols=79  Identities=20%  Similarity=0.289  Sum_probs=69.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||++. ..++..+|+|.++.......+.+.+|+.+++.++|||++++++.+...+.+++++||+++|+|.+++....
T Consensus        33 fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~  112 (293)
T d1yhwa1          33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC  112 (293)
T ss_dssp             SCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSC
T ss_pred             CcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhccC
Confidence            78999998 45799999999875444456678999999999999999999999999999999999999999999887654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.72  E-value=7.8e-17  Score=85.28  Aligned_cols=78  Identities=18%  Similarity=0.172  Sum_probs=68.7

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++. ..++..+|+|.++.........+.+|+.+++.++|||++++++.+...+.++++|||+++|+|.+++...
T Consensus        42 fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~  120 (352)
T d1koba_          42 FGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE  120 (352)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCT
T ss_pred             CeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhc
Confidence            78999998 4579999999997655455567889999999999999999999999999999999999999999887654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.72  E-value=4.9e-17  Score=86.01  Aligned_cols=78  Identities=17%  Similarity=0.167  Sum_probs=69.1

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .+|..+|+|.+........+.+.+|+.+++.++|||++++++.+...+.+++++||+++|+|.+++.+.
T Consensus        39 fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~  117 (350)
T d1koaa2          39 FGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE  117 (350)
T ss_dssp             TEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCT
T ss_pred             CeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhh
Confidence            789999984 578999999997655555667889999999999999999999999999999999999999999998644

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.72  E-value=6.1e-17  Score=83.68  Aligned_cols=78  Identities=27%  Similarity=0.366  Sum_probs=68.1

Q ss_pred             CCceEEEEcC-CCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccCC
Q 038959            1 GSSLLQGKLP-DGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGRS   79 (86)
Q Consensus         1 fg~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~~   79 (86)
                      ||.||+|... ++..+|+|.++... ...+.+.+|+.+++.++|||++++++.+..++..++++||+++|+|..++....
T Consensus        30 fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~  108 (287)
T d1opja_          30 YGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN  108 (287)
T ss_dssp             TSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSC
T ss_pred             CeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhcc
Confidence            7999999954 68899999987533 445679999999999999999999999999999999999999999999987543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.9e-17  Score=85.64  Aligned_cols=77  Identities=16%  Similarity=0.273  Sum_probs=68.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||++.. .++..+|+|.++.......+.+.+|+.+++.++|||++++++.+..++.++++|||+++|+|.+++.+
T Consensus        25 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~  102 (288)
T d2jfla1          25 FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE  102 (288)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH
T ss_pred             CcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHh
Confidence            789999994 57899999999765555556788999999999999999999999999999999999999999998764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=4.3e-17  Score=83.20  Aligned_cols=77  Identities=23%  Similarity=0.274  Sum_probs=68.2

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||+|+++++..||+|.++... .....+.+|+..+..++|||++++++.+..++.+++++||+++|++..++...
T Consensus        17 fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~   93 (258)
T d1k2pa_          17 FGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM   93 (258)
T ss_dssp             TEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSG
T ss_pred             CeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhcc
Confidence            799999998778899999997543 35568999999999999999999999999999999999999999999887654

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.2e-17  Score=83.38  Aligned_cols=79  Identities=18%  Similarity=0.115  Sum_probs=65.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+|+|.++.... ...+.+.+|+.+++.++|||++++++.+..++..+++|||+++|+|.+++.+.
T Consensus        18 fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~   97 (271)
T d1nvra_          18 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD   97 (271)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTT
T ss_pred             CeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcC
Confidence            789999984 5789999999974332 23346889999999999999999999999999999999999999999999765


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus        98 ~   98 (271)
T d1nvra_          98 I   98 (271)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.4e-16  Score=82.41  Aligned_cols=78  Identities=18%  Similarity=0.226  Sum_probs=67.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCC------cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRT------SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++.. .+|..+|+|.++...      ....+.+.+|+.+++.++|||++++++.+...+..++++||+++|+|.+
T Consensus        23 fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~  102 (293)
T d1jksa_          23 FAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD  102 (293)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccccc
Confidence            789999994 579999999986321      1235678999999999999999999999999999999999999999999


Q ss_pred             hhccC
Q 038959           74 FIFGR   78 (86)
Q Consensus        74 ~l~~~   78 (86)
                      ++...
T Consensus       103 ~i~~~  107 (293)
T d1jksa_         103 FLAEK  107 (293)
T ss_dssp             HHHHH
T ss_pred             hhccc
Confidence            98754

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.70  E-value=7.7e-17  Score=83.98  Aligned_cols=79  Identities=20%  Similarity=0.193  Sum_probs=63.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTS-QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+|+|.+..... .....+.+|+.+++.++|||++++++.+...+.+++++||+++|+|.+++...
T Consensus        22 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~  101 (307)
T d1a06a_          22 FSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK  101 (307)
T ss_dssp             GGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTC
T ss_pred             CeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcc
Confidence            789999984 5789999999974332 23346778999999999999999999999999999999999999999999765


Q ss_pred             C
Q 038959           79 S   79 (86)
Q Consensus        79 ~   79 (86)
                      .
T Consensus       102 ~  102 (307)
T d1a06a_         102 G  102 (307)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=6.1e-17  Score=84.78  Aligned_cols=78  Identities=22%  Similarity=0.209  Sum_probs=68.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||+||++. ..++..+|+|.++.. .......+.+|+.+++.++|||++++++.+...+.+++++||+++|+|.+++.+.
T Consensus        19 fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~   98 (322)
T d1s9ja_          19 GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA   98 (322)
T ss_dssp             SCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHH
T ss_pred             CeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhc
Confidence            79999999 457899999999743 2344567889999999999999999999999999999999999999999998754

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.5e-16  Score=81.90  Aligned_cols=77  Identities=16%  Similarity=0.113  Sum_probs=67.2

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++.. .++..+|+|.++... .....+.+|+.+++.++|||++++++.+...+.+++++||+++|+|.+++...
T Consensus        18 fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~   95 (321)
T d1tkia_          18 FGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTS   95 (321)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSS
T ss_pred             CeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhc
Confidence            789999984 478899999997543 33446789999999999999999999999999999999999999999999764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=5.1e-16  Score=79.68  Aligned_cols=75  Identities=25%  Similarity=0.267  Sum_probs=64.0

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||.||+|.++++..||+|.++... ...+.+.+|+.++..++|+|++++++.+. .+..++++||+++|+|.+++..
T Consensus        26 fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~~~~  100 (272)
T d1qpca_          26 FGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKT  100 (272)
T ss_dssp             TEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTS
T ss_pred             CcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHHHhh
Confidence            799999998778889999997533 44567999999999999999999999774 4567899999999999987754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.7e-16  Score=80.11  Aligned_cols=77  Identities=18%  Similarity=0.212  Sum_probs=63.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeee--CCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--GPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+++ ..++..+|+|.++...  ....+.+.+|+.+++.++|||++++++.+..  ...+++++||+++|+|.+++
T Consensus        17 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i   96 (269)
T d2java1          17 YGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI   96 (269)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHH
Confidence            78999998 4578999999997543  2334568899999999999999999998853  56689999999999999988


Q ss_pred             cc
Q 038959           76 FG   77 (86)
Q Consensus        76 ~~   77 (86)
                      ..
T Consensus        97 ~~   98 (269)
T d2java1          97 TK   98 (269)
T ss_dssp             HH
T ss_pred             Hh
Confidence            63

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=6.6e-16  Score=79.75  Aligned_cols=77  Identities=29%  Similarity=0.352  Sum_probs=63.0

Q ss_pred             CCceEEEEcC---CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKLP---DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~~---~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||+|.+.   .+..||+|.++... ....+.+.+|+.+++.++|||++++++.+.. +.+++++||+++|+|.+++.
T Consensus        22 fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~  100 (285)
T d1u59a_          22 FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLV  100 (285)
T ss_dssp             TEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHT
T ss_pred             CeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHhh
Confidence            7999999753   34579999997443 3345678999999999999999999998854 56899999999999999876


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       101 ~~  102 (285)
T d1u59a_         101 GK  102 (285)
T ss_dssp             TC
T ss_pred             cc
Confidence            54

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.65  E-value=8e-16  Score=79.87  Aligned_cols=78  Identities=28%  Similarity=0.453  Sum_probs=64.2

Q ss_pred             CCceEEEEcC-CCC---EEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQ---VIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~---~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+|... ++.   .+|+|.+... .......+.+|+.+++.++||||+++++.+..++.+++++||+++|+|.+++
T Consensus        39 fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~  118 (299)
T d1jpaa_          39 FGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL  118 (299)
T ss_dssp             SSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHH
T ss_pred             CeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeee
Confidence            7999999854 332   5888988643 3334457899999999999999999999999999999999999999999988


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       119 ~~~  121 (299)
T d1jpaa_         119 RQN  121 (299)
T ss_dssp             HTT
T ss_pred             ccc
Confidence            764

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.1e-15  Score=78.39  Aligned_cols=79  Identities=25%  Similarity=0.245  Sum_probs=64.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeee----CCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH----GPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||++.. .++..+|+|.+...  .....+.+.+|+.+++.++|||++++++.+..    ...+++++||+++|+|.+
T Consensus        22 fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~  101 (270)
T d1t4ha_          22 FKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKT  101 (270)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHH
T ss_pred             CcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHH
Confidence            789999984 47889999998643  22334578899999999999999999998754    345789999999999999


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++.+..
T Consensus       102 ~l~~~~  107 (270)
T d1t4ha_         102 YLKRFK  107 (270)
T ss_dssp             HHHHHS
T ss_pred             HHhccc
Confidence            987643

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=6e-16  Score=79.13  Aligned_cols=78  Identities=17%  Similarity=0.184  Sum_probs=66.6

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.+...   .......+.+|+.+++.++|||++++++.+..++.+++++||+++|+|.+++.
T Consensus        19 fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~   98 (263)
T d2j4za1          19 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ   98 (263)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH
T ss_pred             CcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHh
Confidence            789999985 47889999998532   12334578899999999999999999999999999999999999999999987


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus        99 ~~  100 (263)
T d2j4za1          99 KL  100 (263)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.63  E-value=2e-15  Score=78.67  Aligned_cols=79  Identities=20%  Similarity=0.345  Sum_probs=66.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcc---cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQ---GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++. ..++..+|+|.++.....   ....+.+|+.+++.++|||++++++.+..++..++++||+.+|++..++.
T Consensus        28 fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~  107 (309)
T d1u5ra_          28 FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV  107 (309)
T ss_dssp             SSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH
T ss_pred             CeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHH
Confidence            79999998 457889999999754322   23468899999999999999999999999999999999999998887665


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus       108 ~~~  110 (309)
T d1u5ra_         108 HKK  110 (309)
T ss_dssp             HTS
T ss_pred             hCC
Confidence            443

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.8e-15  Score=77.12  Aligned_cols=79  Identities=23%  Similarity=0.235  Sum_probs=62.9

Q ss_pred             CCceEEEEcC---CCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP---DGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~---~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+|.+.   .+..||+|.++...  ......+.+|+.+++.++|||++++++.+.. +..++++||+++|+|.+++
T Consensus        20 fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L~~~l   98 (277)
T d1xbba_          20 FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYL   98 (277)
T ss_dssp             SEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHH
T ss_pred             CeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCCcHHHHH
Confidence            7999999853   34679999996432  2234578999999999999999999998854 4578999999999999998


Q ss_pred             ccCCC
Q 038959           76 FGRSF   80 (86)
Q Consensus        76 ~~~~~   80 (86)
                      .+...
T Consensus        99 ~~~~~  103 (277)
T d1xbba_          99 QQNRH  103 (277)
T ss_dssp             HHCTT
T ss_pred             hhccC
Confidence            86544

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1e-15  Score=78.20  Aligned_cols=75  Identities=27%  Similarity=0.404  Sum_probs=61.7

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeee-eCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSL-HGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||+|.+ .+..+|+|.++..  ...+.+.+|+..++.++|||++++++.+. ..+.+++++||+++|+|.+++...
T Consensus        20 fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~   95 (262)
T d1byga_          20 FGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR   95 (262)
T ss_dssp             SCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHH
T ss_pred             CeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhc
Confidence            799999987 4678999999643  34567899999999999999999999885 456789999999999999998653

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.1e-15  Score=77.22  Aligned_cols=76  Identities=26%  Similarity=0.299  Sum_probs=64.6

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||+|....+..||+|.++... ...+.+.+|+.+++.++|+||+++++.+. .+..++++||+++|++..++.+.
T Consensus        30 fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~  105 (285)
T d1fmka3          30 FGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGE  105 (285)
T ss_dssp             SCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHSHH
T ss_pred             CeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecCCCchhhhhhhc
Confidence            789999997777789999997543 44568999999999999999999999884 45678999999999999887653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=8.3e-16  Score=79.48  Aligned_cols=78  Identities=17%  Similarity=0.138  Sum_probs=66.4

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.++..   .......+.+|+.+++.++|||++++++.+...+.+++++||+++|+|.+++.
T Consensus        21 fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~  100 (288)
T d1uu3a_          21 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR  100 (288)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhh
Confidence            789999984 57899999998632   12334578899999999999999999999999999999999999999999877


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       101 ~~  102 (288)
T d1uu3a_         101 KI  102 (288)
T ss_dssp             HH
T ss_pred             cc
Confidence            54

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.60  E-value=2.1e-15  Score=77.57  Aligned_cols=79  Identities=19%  Similarity=0.156  Sum_probs=65.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcc---------cHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQ---------GIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g   69 (86)
                      ||+||+++ ..++..+|+|.++.....         ..+.+.+|+.+++.+. |||++++++.+..++.+++++||+++|
T Consensus        16 ~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g   95 (277)
T d1phka_          16 SSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG   95 (277)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             CeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCc
Confidence            78999998 457889999998643211         1235788999999986 999999999999999999999999999


Q ss_pred             ChhhhhccCC
Q 038959           70 SLDFFIFGRS   79 (86)
Q Consensus        70 ~l~~~l~~~~   79 (86)
                      +|.+++....
T Consensus        96 ~L~~~l~~~~  105 (277)
T d1phka_          96 ELFDYLTEKV  105 (277)
T ss_dssp             BHHHHHHHHS
T ss_pred             hHHHHHHhcC
Confidence            9999997543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5.9e-15  Score=75.86  Aligned_cols=75  Identities=31%  Similarity=0.393  Sum_probs=61.8

Q ss_pred             CCceEEEEcCCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||+|++.  ..+|+|.++..  .......+.+|+.++..++|||++++++.+. .+.+++++||+++|+|.+++...
T Consensus        21 fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~L~~~l~~~   97 (276)
T d1uwha_          21 FGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHII   97 (276)
T ss_dssp             SCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCCEEEHHHHHHTS
T ss_pred             CcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEecCCCCCHHHHHhhc
Confidence            7999999864  35999999743  2344567899999999999999999998764 45689999999999999998654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.7e-15  Score=78.46  Aligned_cols=79  Identities=15%  Similarity=0.163  Sum_probs=67.5

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||+++ ..++..+|+|.++..   .......+.+|+.+++.++|||++++++.+.....+++++||+++|+|..++.
T Consensus        18 fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~   97 (337)
T d1o6la_          18 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS   97 (337)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchhhhhh
Confidence            78999999 457999999999632   12234567899999999999999999999999999999999999999999887


Q ss_pred             cCC
Q 038959           77 GRS   79 (86)
Q Consensus        77 ~~~   79 (86)
                      ...
T Consensus        98 ~~~  100 (337)
T d1o6la_          98 RER  100 (337)
T ss_dssp             HHS
T ss_pred             ccc
Confidence            643

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=5.3e-15  Score=77.28  Aligned_cols=80  Identities=13%  Similarity=0.152  Sum_probs=67.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||+++. .+|..+|+|.++..   .....+.+.+|+.+++.++|||++++++.+...+.+++++|++++|++..++.
T Consensus        17 fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~   96 (316)
T d1fota_          17 FGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR   96 (316)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH
T ss_pred             CcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCcccccccc
Confidence            789999994 57999999998632   12345678899999999999999999999999999999999999999998887


Q ss_pred             cCCC
Q 038959           77 GRSF   80 (86)
Q Consensus        77 ~~~~   80 (86)
                      ....
T Consensus        97 ~~~~  100 (316)
T d1fota_          97 KSQR  100 (316)
T ss_dssp             HTSS
T ss_pred             cccc
Confidence            6544

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.3e-14  Score=75.94  Aligned_cols=79  Identities=20%  Similarity=0.248  Sum_probs=62.8

Q ss_pred             CCceEEEEcC-CC-----CEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKLP-DG-----QVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~~-~~-----~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||+|... .+     ..||+|.+.... ......+.+|+.++..+ +|||++++++.+...+.+++++||+++|+|.
T Consensus        50 fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~  129 (325)
T d1rjba_          50 FGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL  129 (325)
T ss_dssp             SEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred             CeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHH
Confidence            7999999842 22     268999886432 23345788899999887 8999999999999999999999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      +++++.+
T Consensus       130 ~~l~~~~  136 (325)
T d1rjba_         130 NYLRSKR  136 (325)
T ss_dssp             HHHHTTT
T ss_pred             HHHHhcc
Confidence            9998654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=4.1e-14  Score=73.76  Aligned_cols=80  Identities=24%  Similarity=0.340  Sum_probs=64.4

Q ss_pred             CCceEEEEcCC----CCEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeee-CCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLPD----GQVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH-GPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~~----~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||+||+|.+..    ...+|+|.++.. .......+.+|+.+++.++|||++++++.+.. ++..++++|++++|+|.++
T Consensus        40 fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~  119 (311)
T d1r0pa_          40 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF  119 (311)
T ss_dssp             TEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHH
T ss_pred             CeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhh
Confidence            79999998532    235899999743 33445679999999999999999999998765 5678999999999999998


Q ss_pred             hccCCC
Q 038959           75 IFGRSF   80 (86)
Q Consensus        75 l~~~~~   80 (86)
                      +.....
T Consensus       120 ~~~~~~  125 (311)
T d1r0pa_         120 IRNETH  125 (311)
T ss_dssp             HHCTTC
T ss_pred             hccccc
Confidence            876543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=8e-15  Score=76.38  Aligned_cols=80  Identities=21%  Similarity=0.235  Sum_probs=66.2

Q ss_pred             CCceEEEEc------CCCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            1 GSSLLQGKL------PDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~~------~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      ||.||+|++      ..+..+|+|.++... ......+.+|+.++..+ +|+|++++++.+......++++||+++|+|.
T Consensus        36 fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~  115 (311)
T d1t46a_          36 FGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL  115 (311)
T ss_dssp             SEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHH
T ss_pred             CeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHH
Confidence            789999974      235689999997543 33445788999999987 6999999999999999999999999999999


Q ss_pred             hhhccCCC
Q 038959           73 FFIFGRSF   80 (86)
Q Consensus        73 ~~l~~~~~   80 (86)
                      ++++....
T Consensus       116 ~~l~~~~~  123 (311)
T d1t46a_         116 NFLRRKRD  123 (311)
T ss_dssp             HHHHHTTT
T ss_pred             HHHHhccc
Confidence            99986543

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.5e-14  Score=73.70  Aligned_cols=78  Identities=28%  Similarity=0.413  Sum_probs=64.3

Q ss_pred             CCceEEEEcCC-C----CEEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLPD-G----QVIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~~-~----~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|.+.. +    ..||+|.++.. .......+.+|+.++..++|+|++++++.+...+..++++|++.+|++...
T Consensus        20 fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~   99 (283)
T d1mqba_          20 FGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKF   99 (283)
T ss_dssp             SSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHH
T ss_pred             CeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCcchhh
Confidence            79999998542 2    36899999743 233345788999999999999999999999999999999999999999887


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       100 ~~~~  103 (283)
T d1mqba_         100 LREK  103 (283)
T ss_dssp             HHHT
T ss_pred             hhcc
Confidence            7654

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.7e-14  Score=75.08  Aligned_cols=78  Identities=27%  Similarity=0.405  Sum_probs=62.7

Q ss_pred             CCceEEEEcC-CCC--EEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-DGQ--VIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~~~--~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+|.+. ++.  .+|+|.++... ....+.+.+|+.++..+ +|+||+++++.+...+..++++||+++|+|.+++
T Consensus        23 fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l  102 (309)
T d1fvra_          23 FGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL  102 (309)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHH
T ss_pred             CcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHH
Confidence            7999999854 444  46788876432 23445789999999998 7999999999999999999999999999999998


Q ss_pred             ccC
Q 038959           76 FGR   78 (86)
Q Consensus        76 ~~~   78 (86)
                      ...
T Consensus       103 ~~~  105 (309)
T d1fvra_         103 RKS  105 (309)
T ss_dssp             HTT
T ss_pred             hhc
Confidence            754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.55  E-value=3.3e-14  Score=73.76  Aligned_cols=79  Identities=29%  Similarity=0.425  Sum_probs=66.6

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRTSQ-GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||+|++.      ++..||+|.++..... ....+.+|+.+++.++|+|++++.+.+...+..++++|++++|+|.+
T Consensus        26 fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~  105 (301)
T d1lufa_          26 FGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE  105 (301)
T ss_dssp             SCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred             CeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEecCCCcHHH
Confidence            8999999842      3468999999754322 34578999999999999999999999999999999999999999999


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++....
T Consensus       106 ~l~~~~  111 (301)
T d1lufa_         106 FLRSMS  111 (301)
T ss_dssp             HHHHTC
T ss_pred             HHHhcC
Confidence            997543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.7e-14  Score=75.08  Aligned_cols=77  Identities=22%  Similarity=0.367  Sum_probs=64.5

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||+|.+.      .+..||+|.++... ......+.+|+.+++.++|+|++++++.+...+..++++|++++|+|.+
T Consensus        33 fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~  112 (308)
T d1p4oa_          33 FGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS  112 (308)
T ss_dssp             SSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred             CeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHH
Confidence            7999998742      25689999997433 2333468899999999999999999999998999999999999999999


Q ss_pred             hhcc
Q 038959           74 FIFG   77 (86)
Q Consensus        74 ~l~~   77 (86)
                      ++..
T Consensus       113 ~~~~  116 (308)
T d1p4oa_         113 YLRS  116 (308)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8764

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.55  E-value=1.9e-14  Score=73.84  Aligned_cols=79  Identities=20%  Similarity=0.195  Sum_probs=64.2

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc---ccHHHHHHHHHHHhcCCCCcccceeeeeeeCC----ceEEEEeccCCCChh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS---QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP----ERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~l~~e~~~~g~l~   72 (86)
                      ||.||++. ..++..+|+|.++....   .....+.+|+.+++.++|||++++++.+...+    .++++|||+++|+|.
T Consensus        20 fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~   99 (277)
T d1o6ya_          20 MSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLR   99 (277)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEeh
Confidence            78999998 45799999999974332   22346889999999999999999999886543    378999999999999


Q ss_pred             hhhccCC
Q 038959           73 FFIFGRS   79 (86)
Q Consensus        73 ~~l~~~~   79 (86)
                      .++....
T Consensus       100 ~~~~~~~  106 (277)
T d1o6ya_         100 DIVHTEG  106 (277)
T ss_dssp             HHHHHHC
T ss_pred             hhhcccC
Confidence            8876543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=3.3e-14  Score=73.62  Aligned_cols=78  Identities=18%  Similarity=0.214  Sum_probs=61.3

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCccc-----HHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQG-----IVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||+||++.. .++..+|+|.++......     ...+.+|+.+++.+.|+|++++++.+...+..++++|++.++.+..+
T Consensus        11 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~   90 (299)
T d1ua2a_          11 FATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVII   90 (299)
T ss_dssp             TEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHH
T ss_pred             CeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchHHhhh
Confidence            799999994 578999999986432111     23578999999999999999999999999999999999988877666


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      ....
T Consensus        91 ~~~~   94 (299)
T d1ua2a_          91 KDNS   94 (299)
T ss_dssp             TTCC
T ss_pred             hhcc
Confidence            5543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.6e-14  Score=75.61  Aligned_cols=79  Identities=14%  Similarity=0.173  Sum_probs=63.7

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHh-cCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIA-KPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||++.. .++..+|+|.++..   .......+..|...+. .++|||++++++.+...+..++++||+++|+|..++
T Consensus        15 fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i   94 (320)
T d1xjda_          15 FGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI   94 (320)
T ss_dssp             SSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHH
T ss_pred             CcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHh
Confidence            799999994 57899999999632   1223345666666655 589999999999999999999999999999999998


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus        95 ~~~~   98 (320)
T d1xjda_          95 QSCH   98 (320)
T ss_dssp             HHHS
T ss_pred             hccC
Confidence            7543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.8e-14  Score=74.54  Aligned_cols=73  Identities=21%  Similarity=0.143  Sum_probs=59.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHh-cCCCCcccceeeeeee----CCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIA-KPQHTNIVRLIGCSLH----GPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~----~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||++. ..++..+|+|.++..     ....+|+.++. ..+|||++++++.+..    ...+++++||+++|+|.++
T Consensus        25 fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~   99 (335)
T d2ozaa1          25 NGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSR   99 (335)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHH
Confidence            79999998 457899999998632     35667887765 4589999999998754    4568999999999999999


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +.+.
T Consensus       100 i~~~  103 (335)
T d2ozaa1         100 IQDR  103 (335)
T ss_dssp             HHSC
T ss_pred             HHhc
Confidence            9764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=8.4e-14  Score=72.32  Aligned_cols=75  Identities=23%  Similarity=0.234  Sum_probs=58.0

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcccHHHHH--HHHHHHhcCCCCcccceeeeeeeCC----ceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQGIVEFK--NEAKVIAKPQHTNIVRLIGCSLHGP----ERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~----~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|++ .|..||+|.++..   ......  .|+..+..++|||++++++.+...+    ..++++||+++|+|..+
T Consensus        16 fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~   91 (303)
T d1vjya_          16 FGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDY   91 (303)
T ss_dssp             SSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHH
T ss_pred             CeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHH
Confidence            799999986 5789999998632   223333  4455556789999999999986543    57899999999999999


Q ss_pred             hccCC
Q 038959           75 IFGRS   79 (86)
Q Consensus        75 l~~~~   79 (86)
                      +++..
T Consensus        92 l~~~~   96 (303)
T d1vjya_          92 LNRYT   96 (303)
T ss_dssp             HHHCC
T ss_pred             HhcCC
Confidence            98653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.49  E-value=1.9e-13  Score=70.36  Aligned_cols=78  Identities=15%  Similarity=0.184  Sum_probs=65.2

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||+||++..+++..+|+|.++....  .....+.+|+.+++.++|+|++++++.+...+..+++++++.++.+..+....
T Consensus        15 fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~   94 (286)
T d1ob3a_          15 YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE   94 (286)
T ss_dssp             TEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTST
T ss_pred             CcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhc
Confidence            7899999977889999999965422  22457889999999999999999999999999999999999877666665544

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.49  E-value=1.6e-13  Score=72.80  Aligned_cols=79  Identities=14%  Similarity=0.134  Sum_probs=62.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC---cccHHHHHH---HHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT---SQGIVEFKN---EAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~---~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||+++ ..++..+|+|.+....   ......+..   ++..++.+.|||++++++.+...+.+++++||+++|+|..
T Consensus        17 fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~   96 (364)
T d1omwa3          17 FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY   96 (364)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHH
Confidence            79999999 4579999999985321   111222333   3567778899999999999999999999999999999999


Q ss_pred             hhccCC
Q 038959           74 FIFGRS   79 (86)
Q Consensus        74 ~l~~~~   79 (86)
                      ++....
T Consensus        97 ~l~~~~  102 (364)
T d1omwa3          97 HLSQHG  102 (364)
T ss_dssp             HHHHHC
T ss_pred             HHHhcc
Confidence            987543

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.7e-13  Score=70.97  Aligned_cols=75  Identities=23%  Similarity=0.309  Sum_probs=59.9

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc--ccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS--QGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++. ..++..+|+|.++....  .....+.+|+.+++.++|||++++++.+..++.+++++|++.++ +..++.
T Consensus        15 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~-~~~~~~   92 (298)
T d1gz8a_          15 YGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMD   92 (298)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEE-HHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCCc-hhhhhh
Confidence            79999999 46799999999964321  23457889999999999999999999999999999999999764 444443

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.49  E-value=1.1e-13  Score=73.08  Aligned_cols=78  Identities=15%  Similarity=0.109  Sum_probs=66.5

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC---CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR---TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||++.. .++..+|+|.++..   .....+.+.+|+.+++.+.|||++++++.+......+++++++.+|+|..++.
T Consensus        54 fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~  133 (350)
T d1rdqe_          54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR  133 (350)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH
T ss_pred             CcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccccchhhhHh
Confidence            799999984 57999999998532   12334568899999999999999999999999999999999999999999887


Q ss_pred             cC
Q 038959           77 GR   78 (86)
Q Consensus        77 ~~   78 (86)
                      ..
T Consensus       134 ~~  135 (350)
T d1rdqe_         134 RI  135 (350)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.3e-13  Score=69.72  Aligned_cols=78  Identities=23%  Similarity=0.228  Sum_probs=62.3

Q ss_pred             CCceEEEEcC-C---CCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGKLP-D---GQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~~~-~---~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||.||+|.+. .   +..+|+|.++... ......+.+|+.+++.++|||++++++.+. .+.+++++|++++|++..++
T Consensus        20 fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~   98 (273)
T d1mp8a_          20 FGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFL   98 (273)
T ss_dssp             SSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHH
T ss_pred             CcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhh
Confidence            7999999853 2   3468899886443 233457899999999999999999999885 56789999999999999887


Q ss_pred             ccCC
Q 038959           76 FGRS   79 (86)
Q Consensus        76 ~~~~   79 (86)
                      ....
T Consensus        99 ~~~~  102 (273)
T d1mp8a_          99 QVRK  102 (273)
T ss_dssp             HHTT
T ss_pred             hccC
Confidence            6543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=7e-13  Score=68.24  Aligned_cols=79  Identities=20%  Similarity=0.228  Sum_probs=66.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhhhcc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFG   77 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~   77 (86)
                      ||+||+++ ..++..+|+|.++...  ......+.+|+.+++.++|+|++++.+.+..+...+++++++.++.+..++..
T Consensus        15 fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~   94 (292)
T d1unla_          15 YGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC   94 (292)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHT
T ss_pred             CeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeecccccccccccc
Confidence            79999999 4578899999986432  23456788999999999999999999999999999999999999888877765


Q ss_pred             CC
Q 038959           78 RS   79 (86)
Q Consensus        78 ~~   79 (86)
                      ..
T Consensus        95 ~~   96 (292)
T d1unla_          95 NG   96 (292)
T ss_dssp             TT
T ss_pred             cc
Confidence            43

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.1e-13  Score=69.23  Aligned_cols=79  Identities=16%  Similarity=0.268  Sum_probs=62.1

Q ss_pred             CCceEEEEcC-C-------CCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCC
Q 038959            1 GSSLLQGKLP-D-------GQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKS   70 (86)
Q Consensus         1 fg~v~~~~~~-~-------~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~   70 (86)
                      ||.||+++.. .       +..||+|.++... ......+..|...+..+ +|+||+++++.+.....+++++||+++|+
T Consensus        26 fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~  105 (299)
T d1fgka_          26 FGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN  105 (299)
T ss_dssp             --CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCB
T ss_pred             CcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCc
Confidence            7899999732 2       2368999997543 23345778888888776 89999999999999999999999999999


Q ss_pred             hhhhhccCC
Q 038959           71 LDFFIFGRS   79 (86)
Q Consensus        71 l~~~l~~~~   79 (86)
                      |.+++....
T Consensus       106 l~~~i~~~~  114 (299)
T d1fgka_         106 LREYLQARR  114 (299)
T ss_dssp             HHHHHHTTS
T ss_pred             HHHHHHhhc
Confidence            999997654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.7e-12  Score=67.67  Aligned_cols=77  Identities=23%  Similarity=0.349  Sum_probs=59.3

Q ss_pred             CCceEEEEcC-CCC----EEEEEEecCC-CcccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            1 GSSLLQGKLP-DGQ----VIAVKRLSGR-TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~~~-~~~----~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.||+|.+. ++.    .||+|.++.. .......+.+|+.+++.++|||++++++.+..+ ..+++++++.+|+|.++
T Consensus        22 fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~~~  100 (317)
T d1xkka_          22 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDY  100 (317)
T ss_dssp             SEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTTCBHHHH
T ss_pred             CeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEEeccCCccccc
Confidence            7999999843 443    5889988643 334566899999999999999999999998754 56778899999999988


Q ss_pred             hccC
Q 038959           75 IFGR   78 (86)
Q Consensus        75 l~~~   78 (86)
                      +...
T Consensus       101 ~~~~  104 (317)
T d1xkka_         101 VREH  104 (317)
T ss_dssp             HHHT
T ss_pred             cccc
Confidence            7754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=7.9e-13  Score=67.79  Aligned_cols=76  Identities=26%  Similarity=0.345  Sum_probs=56.8

Q ss_pred             CCceEEEEcC--CCC--EEEEEEecCCC---cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKLP--DGQ--VIAVKRLSGRT---SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~~--~~~--~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~   73 (86)
                      ||.||+|++.  .+.  .||+|.++...   ....+.+.+|+.++..++|+|++++++.+.. +..++++|++++|++.+
T Consensus        21 fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l~~   99 (273)
T d1u46a_          21 FGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLD   99 (273)
T ss_dssp             -CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHH
T ss_pred             CeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeeeecCcchhh
Confidence            7999999842  233  68899886432   2334578999999999999999999999965 46789999999999998


Q ss_pred             hhcc
Q 038959           74 FIFG   77 (86)
Q Consensus        74 ~l~~   77 (86)
                      .+..
T Consensus       100 ~~~~  103 (273)
T d1u46a_         100 RLRK  103 (273)
T ss_dssp             HHHH
T ss_pred             hhhc
Confidence            7654

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.4e-12  Score=68.64  Aligned_cols=80  Identities=11%  Similarity=0.061  Sum_probs=61.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcccceeeeeeeCCc----eEEEEeccCCCChhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPE----RILVYEFMPNKSLDFF   74 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~l~~e~~~~g~l~~~   74 (86)
                      ||+||+|. ..++..+|+|.++... ......+.+|+.+++.++|+|++++++.+.....    .+++++++.+|+|.++
T Consensus        21 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~  100 (345)
T d1pmea_          21 YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKL  100 (345)
T ss_dssp             CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHH
T ss_pred             CeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhh
Confidence            79999998 5689999999997433 2334578899999999999999999998865432    2444556779999999


Q ss_pred             hccCCC
Q 038959           75 IFGRSF   80 (86)
Q Consensus        75 l~~~~~   80 (86)
                      +...+.
T Consensus       101 l~~~~l  106 (345)
T d1pmea_         101 LKTQHL  106 (345)
T ss_dssp             HHHCCC
T ss_pred             hhcCCC
Confidence            876543

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.3e-12  Score=68.70  Aligned_cols=80  Identities=15%  Similarity=0.150  Sum_probs=62.0

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeC-----CceEEEEeccCCCChh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHG-----PERILVYEFMPNKSLD   72 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~l~~e~~~~g~l~   72 (86)
                      ||+||++. ..++..+|+|.++...  ......+.+|+.+++.+.|+|++++++.+...     ...+++++++.+|+|.
T Consensus        31 fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~  110 (348)
T d2gfsa1          31 YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN  110 (348)
T ss_dssp             TSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHH
T ss_pred             CeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchh
Confidence            79999998 5579999999997432  23344678999999999999999999887532     2345666778899999


Q ss_pred             hhhccCCC
Q 038959           73 FFIFGRSF   80 (86)
Q Consensus        73 ~~l~~~~~   80 (86)
                      +++...+.
T Consensus       111 ~~~~~~~l  118 (348)
T d2gfsa1         111 NIVKCQKL  118 (348)
T ss_dssp             HHHTTCCC
T ss_pred             hhcccccc
Confidence            99876543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.34  E-value=6.5e-12  Score=65.65  Aligned_cols=72  Identities=19%  Similarity=0.255  Sum_probs=59.6

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeee--CCceEEEEeccCCCChhhhh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLH--GPERILVYEFMPNKSLDFFI   75 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~--~~~~~l~~e~~~~g~l~~~l   75 (86)
                      ||+||+++ ..++..+|+|.++..   ....+.+|+.++..+ +|+|++++++.+..  ...+++++|++.+++|..+.
T Consensus        48 fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~  123 (328)
T d3bqca1          48 YSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY  123 (328)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT
T ss_pred             CeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh
Confidence            78999998 457899999998643   345778899999987 59999999998864  45689999999999987764

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=7.8e-12  Score=65.78  Aligned_cols=78  Identities=17%  Similarity=0.173  Sum_probs=59.6

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeeeCC------ceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLHGP------ERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~l~~e~~~~g~l   71 (86)
                      ||+||++. ..++..+|+|.++...  ......+.+|+.+++.++|+|++++++.+...+      ..++++|++ +.++
T Consensus        31 fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l  109 (346)
T d1cm8a_          31 YGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDL  109 (346)
T ss_dssp             --CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEH
T ss_pred             CeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecc-cccH
Confidence            79999999 4579999999997432  223456889999999999999999999886544      468999999 5567


Q ss_pred             hhhhccCC
Q 038959           72 DFFIFGRS   79 (86)
Q Consensus        72 ~~~l~~~~   79 (86)
                      ..+++..+
T Consensus       110 ~~~~~~~~  117 (346)
T d1cm8a_         110 GKLMKHEK  117 (346)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcc
Confidence            77766543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.6e-12  Score=66.60  Aligned_cols=73  Identities=18%  Similarity=0.121  Sum_probs=56.7

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCC--cccHHHHHHHHHHHhcCCCCcccceeeeeee------CCceEEEEeccCCCCh
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRT--SQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH------GPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~l~~e~~~~g~l   71 (86)
                      ||+||++. ..++..+|+|.+....  ......+.+|+.+++.++|||++++++.+..      ...+++++|++.++.+
T Consensus        30 fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~  109 (355)
T d2b1pa1          30 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC  109 (355)
T ss_dssp             -CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHHH
Confidence            78999998 4579999999997432  2233467899999999999999999998853      3678999999976544


Q ss_pred             hh
Q 038959           72 DF   73 (86)
Q Consensus        72 ~~   73 (86)
                      ..
T Consensus       110 ~~  111 (355)
T d2b1pa1         110 QV  111 (355)
T ss_dssp             HH
T ss_pred             Hh
Confidence            43

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=3.6e-11  Score=62.53  Aligned_cols=76  Identities=18%  Similarity=0.225  Sum_probs=57.0

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCC--CcccHHHHHHHHHHHhcCCCCcccceeeeeee--------CCceEEEEeccCCC
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGR--TSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH--------GPERILVYEFMPNK   69 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~l~~e~~~~g   69 (86)
                      ||+||++.. .++..+|+|.+...  .......+.+|+.+++.++|+|++++.+.+..        ....++++|++.++
T Consensus        23 fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~  102 (318)
T d3blha1          23 FGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD  102 (318)
T ss_dssp             SSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEE
T ss_pred             CeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCC
Confidence            799999994 57999999998633  22334578899999999999999999987744        34688999999877


Q ss_pred             Chhhhhc
Q 038959           70 SLDFFIF   76 (86)
Q Consensus        70 ~l~~~l~   76 (86)
                      .+.....
T Consensus       103 ~~~~~~~  109 (318)
T d3blha1         103 LAGLLSN  109 (318)
T ss_dssp             HHHHHTC
T ss_pred             ccchhhh
Confidence            6554433

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.9e-11  Score=61.63  Aligned_cols=78  Identities=19%  Similarity=0.301  Sum_probs=57.3

Q ss_pred             CCceEEEEcC------CCCEEEEEEecCCC-cccHHHHHHHHHHHhcC-CCCcccceeeeeee-CCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKLP------DGQVIAVKRLSGRT-SQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLH-GPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~~------~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~~~l~~e~~~~g~l   71 (86)
                      ||.||+|...      ++..+|+|.++... ......+..+...+..+ +|+|++...+.+.. ....++++|++++|+|
T Consensus        26 fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L  105 (299)
T d1ywna1          26 FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL  105 (299)
T ss_dssp             SCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBH
T ss_pred             CeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcH
Confidence            7999999842      23579999987432 23344677777777665 78999999888754 4568999999999999


Q ss_pred             hhhhccC
Q 038959           72 DFFIFGR   78 (86)
Q Consensus        72 ~~~l~~~   78 (86)
                      .+++...
T Consensus       106 ~~~l~~~  112 (299)
T d1ywna1         106 STYLRSK  112 (299)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhc
Confidence            9999754

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=5.2e-12  Score=66.07  Aligned_cols=79  Identities=15%  Similarity=0.159  Sum_probs=63.4

Q ss_pred             CCceEEEEc-C---CCCEEEEEEecCCC----cccHHHHHHHHHHHhcCCC-CcccceeeeeeeCCceEEEEeccCCCCh
Q 038959            1 GSSLLQGKL-P---DGQVIAVKRLSGRT----SQGIVEFKNEAKVIAKPQH-TNIVRLIGCSLHGPERILVYEFMPNKSL   71 (86)
Q Consensus         1 fg~v~~~~~-~---~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~l~~e~~~~g~l   71 (86)
                      ||.||++.. .   +|..+|+|.++...    ....+.+.+|+.+++.+.| +|++++++.+......++++|++.+|+|
T Consensus        37 fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L  116 (322)
T d1vzoa_          37 YGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL  116 (322)
T ss_dssp             TEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred             CeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHH
Confidence            789999973 2   47899999986321    1233457788999999855 8999999999999999999999999999


Q ss_pred             hhhhccCC
Q 038959           72 DFFIFGRS   79 (86)
Q Consensus        72 ~~~l~~~~   79 (86)
                      ..++....
T Consensus       117 ~~~i~~~~  124 (322)
T d1vzoa_         117 FTHLSQRE  124 (322)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHhcc
Confidence            99887543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=6e-11  Score=62.54  Aligned_cols=69  Identities=25%  Similarity=0.305  Sum_probs=52.9

Q ss_pred             CCceEEEEc-CCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccceeeeeee------CCceEEEEeccCCCChhh
Q 038959            1 GSSLLQGKL-PDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRLIGCSLH------GPERILVYEFMPNKSLDF   73 (86)
Q Consensus         1 fg~v~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~l~~e~~~~g~l~~   73 (86)
                      ||+||+++. .++..+|+|.+.....    ...+|+.+++.++|+|++++++.+..      ...+++++||++++.+..
T Consensus        33 fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~  108 (350)
T d1q5ka_          33 FGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV  108 (350)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHH
Confidence            799999994 5799999999964321    22368889999999999999988743      234789999998764333

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=5.2e-12  Score=64.69  Aligned_cols=78  Identities=19%  Similarity=0.193  Sum_probs=59.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCc------ccHHHHHHHHHHHhcCC--CCcccceeeeeeeCCceEEEEeccCC-CC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTS------QGIVEFKNEAKVIAKPQ--HTNIVRLIGCSLHGPERILVYEFMPN-KS   70 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~l~~e~~~~-g~   70 (86)
                      ||.||++. ..++..+|+|.++....      .....+.+|+.+++.+.  |+|++++++.+..++..++++|++.+ ++
T Consensus        17 fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~   96 (273)
T d1xwsa_          17 FGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD   96 (273)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEE
T ss_pred             CeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcch
Confidence            78999999 45799999999863211      11123567888888764  89999999999999999999999975 56


Q ss_pred             hhhhhccC
Q 038959           71 LDFFIFGR   78 (86)
Q Consensus        71 l~~~l~~~   78 (86)
                      +..++...
T Consensus        97 l~~~~~~~  104 (273)
T d1xwsa_          97 LFDFITER  104 (273)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhcc
Confidence            77777643

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.09  E-value=3.9e-10  Score=58.18  Aligned_cols=75  Identities=19%  Similarity=0.218  Sum_probs=58.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCC-CCcccceeeeeeeCCceEEEEeccCCCChhhhhccC
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQ-HTNIVRLIGCSLHGPERILVYEFMPNKSLDFFIFGR   78 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~l~~~   78 (86)
                      ||.||++. ..++..+|+|.+....  ....+..|...+..+. +++++.+.+........++++|++ +++|.+++...
T Consensus        18 fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~   94 (293)
T d1csna_          18 FGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLC   94 (293)
T ss_dssp             SCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT
T ss_pred             CeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhh
Confidence            79999999 4578899999986432  2224567777787775 488889999988999999999998 67888887654

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=5.8e-10  Score=57.63  Aligned_cols=75  Identities=19%  Similarity=0.279  Sum_probs=51.2

Q ss_pred             CCceEEEEc-CC-CCEEEEEEecCC--CcccHHHHHHHHHHHh---cCCCCcccceeeeeee-----CCceEEEEeccCC
Q 038959            1 GSSLLQGKL-PD-GQVIAVKRLSGR--TSQGIVEFKNEAKVIA---KPQHTNIVRLIGCSLH-----GPERILVYEFMPN   68 (86)
Q Consensus         1 fg~v~~~~~-~~-~~~~~~k~~~~~--~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~-----~~~~~l~~e~~~~   68 (86)
                      ||.||++.. .+ +..||+|.++..  .........+|+..++   ..+|||++++++.+..     ....++++|++.+
T Consensus        20 fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~   99 (305)
T d1blxa_          20 YGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ   99 (305)
T ss_dssp             TEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSC
T ss_pred             CeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccC
Confidence            799999984 44 567899998532  1112223456665554   4589999999988743     3468899999988


Q ss_pred             CChhhhh
Q 038959           69 KSLDFFI   75 (86)
Q Consensus        69 g~l~~~l   75 (86)
                      +.+....
T Consensus       100 ~~~~~~~  106 (305)
T d1blxa_         100 DLTTYLD  106 (305)
T ss_dssp             BHHHHHH
T ss_pred             Cchhhhh
Confidence            7665443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.90  E-value=5.1e-09  Score=53.98  Aligned_cols=73  Identities=19%  Similarity=0.219  Sum_probs=52.8

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcCCCCcccce-eeeeeeCCceEEEEeccCCCChhhhhc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKPQHTNIVRL-IGCSLHGPERILVYEFMPNKSLDFFIF   76 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~l~~e~~~~g~l~~~l~   76 (86)
                      ||.||+|. ..++..||+|.+.....  ...+..|..+++.+.|++++.. .......+..++++|+++ +++...+.
T Consensus        20 fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~-~~l~~~~~   94 (299)
T d1ckia_          20 FGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG-PSLEDLFN   94 (299)
T ss_dssp             SSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC-CBHHHHHH
T ss_pred             CcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC-Cchhhhhh
Confidence            79999998 45788999999864322  2346788899999877665555 445567788889999885 45655544

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.24  E-value=4.8e-06  Score=40.18  Aligned_cols=68  Identities=16%  Similarity=0.116  Sum_probs=45.4

Q ss_pred             CCceEEEEcCCCCEEEEEEecCCCcc------------------cHHHHHHHHHHHhcCCCCcccceeeeeeeCCceEEE
Q 038959            1 GSSLLQGKLPDGQVIAVKRLSGRTSQ------------------GIVEFKNEAKVIAKPQHTNIVRLIGCSLHGPERILV   62 (86)
Q Consensus         1 fg~v~~~~~~~~~~~~~k~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~   62 (86)
                      ||.||.+...+|..+|+|.++.....                  .......|...+..+.|.+++...+..    ..+++
T Consensus        13 ~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~----~~~lv   88 (191)
T d1zara2          13 ESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE----GNAVL   88 (191)
T ss_dssp             SEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE----TTEEE
T ss_pred             ceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec----CCEEE
Confidence            78999998778899999987632110                  012234567777788888877765442    23689


Q ss_pred             EeccCCCChh
Q 038959           63 YEFMPNKSLD   72 (86)
Q Consensus        63 ~e~~~~g~l~   72 (86)
                      +|+++++.+.
T Consensus        89 me~~~~~~~~   98 (191)
T d1zara2          89 MELIDAKELY   98 (191)
T ss_dssp             EECCCCEEGG
T ss_pred             EEeecccccc
Confidence            9999876543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.01  E-value=1.2e-05  Score=42.15  Aligned_cols=69  Identities=17%  Similarity=0.160  Sum_probs=45.7

Q ss_pred             CCceEEEE-cCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-----------CCCcccceeeeeee--CCceEEEEecc
Q 038959            1 GSSLLQGK-LPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-----------QHTNIVRLIGCSLH--GPERILVYEFM   66 (86)
Q Consensus         1 fg~v~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~--~~~~~l~~e~~   66 (86)
                      ||+||+++ ..++..+|+|.++... .......+|+.+++.+           .|+|++++.+.+..  .....+++.+.
T Consensus        26 fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~  104 (362)
T d1q8ya_          26 FSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFE  104 (362)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEEC
T ss_pred             CeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeec
Confidence            78999998 4579999999997432 2234556676666554           35778888877643  44555666655


Q ss_pred             CCCC
Q 038959           67 PNKS   70 (86)
Q Consensus        67 ~~g~   70 (86)
                      ..+.
T Consensus       105 ~~~~  108 (362)
T d1q8ya_         105 VLGE  108 (362)
T ss_dssp             CCCE
T ss_pred             cccc
Confidence            4433

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.51  E-value=0.27  Score=24.09  Aligned_cols=70  Identities=7%  Similarity=-0.043  Sum_probs=40.6

Q ss_pred             eEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcccceeeeeeeCCceEEEEeccCCCChhhh
Q 038959            4 LLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP-QHTNIVRLIGCSLHGPERILVYEFMPNKSLDFF   74 (86)
Q Consensus         4 v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~~~   74 (86)
                      ||.... .+..+.+|............+..|...+..+ .+..+..++.....++..+++++++++.++...
T Consensus        30 v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~  100 (263)
T d1j7la_          30 VYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             EEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             EEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccc
Confidence            554432 4555667766432222222345555555443 233355666666778889999999988776544

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=92.32  E-value=0.28  Score=23.89  Aligned_cols=67  Identities=13%  Similarity=0.113  Sum_probs=40.5

Q ss_pred             ceEEEEcCCCCEEEEEEecCCCcccHHHHHHHHHHHhcC--CCCcccceeeeeeeCCceEEEEeccCCCChh
Q 038959            3 SLLQGKLPDGQVIAVKRLSGRTSQGIVEFKNEAKVIAKP--QHTNIVRLIGCSLHGPERILVYEFMPNKSLD   72 (86)
Q Consensus         3 ~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~l~~e~~~~g~l~   72 (86)
                      .||+....++..+.+|........   .+..|...+..+  ....+..++.....++..+++++++++.++.
T Consensus        26 ~v~r~~~~~~~~~vlK~~~~~~~~---~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          26 AVFRLSAQGRPVLFVKTDLSGALN---ELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             EEEEEECTTSCCEEEEEECSCTTS---CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             eEEEEEeCCCCEEEEEeCCccCHh---HHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            356555556667788887644322   234444444433  2233555666666778889999999875543