BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038963
(117 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q940P5|TET19_ARATH Tetraspanin-19 OS=Arabidopsis thaliana GN=At2g20740 PE=2 SV=1
Length = 221
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 25/107 (23%)
Query: 4 RGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRPMLM 63
R CL+ +LKL+N L+ +VG+AM+ Y ++L +++ Q+G
Sbjct: 6 RSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQE-----------------QMGN---- 44
Query: 64 AVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
+ ADS P WFIY F+G+G +L V++C G I A T NGCCL
Sbjct: 45 -LPFADS---DHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCL 87
>sp|Q93XY5|TET18_ARATH Tetraspanin-18 OS=Arabidopsis thaliana GN=At2g20230 PE=2 SV=1
Length = 270
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 3 CRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRA---DNSGTVSPVSGDEGFVQLGR 59
C LK+LNF+ +G++++ Y I++ EY R D + S SG E +
Sbjct: 6 CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65
Query: 60 PMLMAVSLADSI----------FD----KLPKAWFIYLFIGVGVVLFVISCVGCIGATTR 105
P+ + SI F+ LP WFIY F+ VG+++ +++ +G I A
Sbjct: 66 PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125
Query: 106 NGCCL 110
NGCCL
Sbjct: 126 NGCCL 130
>sp|Q9SVU4|TET20_ARATH Tetraspanin-20 OS=Arabidopsis thaliana GN=At4g28770 PE=2 SV=1
Length = 281
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 74 KLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
LP WFIY F+ +G+++ +++ +G I A NGCCL
Sbjct: 105 DLPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCL 141
>sp|Q3ZCD0|CD81_BOVIN CD81 antigen OS=Bos taurus GN=CD81 PE=2 SV=1
Length = 236
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 3 CRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLG-RPM 61
C C++ LL + NF+ + G ++G ++L R D P + + +++LG RP
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTNLLYLELGDRPA 54
Query: 62 LMAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
P ++ IY+ I VG V+ + +GC GA + C L
Sbjct: 55 --------------PNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|Q6AYR9|TSN1_RAT Tetraspanin-1 OS=Rattus norvegicus GN=Tspan1 PE=2 SV=1
Length = 241
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 24/110 (21%)
Query: 1 MACRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
M C ++ ++ L N L+ + G A++ GI++ +V S + F L
Sbjct: 1 MQCFKFIKVMMILFNLLIFLCGAALLAVGIWV-----------SVDGTSFLKAFGSLSSS 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
+ V++ Y I G VLF++ +GC GA + N C L
Sbjct: 50 AMQFVNVG-------------YFLIAAGAVLFILGFLGCYGAHSENKCVL 86
>sp|Q6GQF5|TSN33_XENLA Tetraspanin-33 OS=Xenopus laevis GN=tspan33 PE=2 SV=1
Length = 268
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 83 LFIGVGVVLFVISCVGCIGATTRNGCCLTCVSLVL 117
L IGVG+++F+I+ GCIG+ N C L S+ L
Sbjct: 66 LLIGVGILMFLITFCGCIGSLRENICLLQTFSICL 100
>sp|Q9N0J9|CD81_SAGOE CD81 protein OS=Saguinus oedipus GN=CD81 PE=2 SV=1
Length = 236
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 3 CRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLG-RPM 61
C C++ LL + NF+ + G ++G ++L R D P + + +++LG +P
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTNLLYLELGDKPA 54
Query: 62 LMAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
P ++ IY+ I VG V+ + +GC GA + C L
Sbjct: 55 --------------PNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|P60034|CD81_PANTR CD81 antigen OS=Pan troglodytes GN=CD81 PE=2 SV=1
Length = 236
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 3 CRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLG-RPM 61
C C++ LL + NF+ + G ++G ++L R D P + + +++LG +P
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTNLLYLELGDKPA 54
Query: 62 LMAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
P ++ IY+ I VG V+ + +GC GA + C L
Sbjct: 55 --------------PNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|P60033|CD81_HUMAN CD81 antigen OS=Homo sapiens GN=CD81 PE=1 SV=1
Length = 236
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 3 CRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLG-RPM 61
C C++ LL + NF+ + G ++G ++L R D P + + +++LG +P
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTNLLYLELGDKPA 54
Query: 62 LMAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
P ++ IY+ I VG V+ + +GC GA + C L
Sbjct: 55 --------------PNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|O97703|CD81_CHLAE CD81 antigen OS=Chlorocebus aethiops GN=CD81 PE=2 SV=1
Length = 236
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 3 CRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLG-RPM 61
C C++ LL + NF+ + G ++G ++L R D P + + +++LG +P
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTNLLYLELGDKPA 54
Query: 62 LMAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
P ++ IY+ I VG V+ + +GC GA + C L
Sbjct: 55 --------------PNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|Q3T0S3|TSN1_BOVIN Tetraspanin-1 OS=Bos taurus GN=TSPAN1 PE=2 SV=1
Length = 241
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 1 MACRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
M C ++ ++ L N L+ + G A++ GI++ V+ FV++ P
Sbjct: 1 MGCFNFIKVMMILFNMLIFLCGAALLAVGIWVSVD---------------GPSFVKIFGP 45
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
M + S + +F+ I G VLF + +GC GA T + C L
Sbjct: 46 M------SSSAMQFVNVGYFL---IAAGAVLFALGFLGCYGAQTESKCAL 86
>sp|Q62745|CD81_RAT CD81 antigen OS=Rattus norvegicus GN=Cd81 PE=1 SV=1
Length = 236
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 26/110 (23%)
Query: 3 CRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRPML 62
C C++ LL + NF+ + G ++G ++L R D T L
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHDPQTTT----------------L 44
Query: 63 MAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
+ + L D P ++ IY+ I VG V+ + +GC GA + C L
Sbjct: 45 LYLELGDK---PAPSTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|O75954|TSN9_HUMAN Tetraspanin-9 OS=Homo sapiens GN=TSPAN9 PE=1 SV=1
Length = 239
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 32/110 (29%)
Query: 4 RGCLECL---LKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + + G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVS---QGNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
L A +L I +G ++ V +GC+GA N C L
Sbjct: 50 SLSAANLV----------------IAIGTIVMVTGFLGCLGAIKENKCLL 83
>sp|Q8BJU2|TSN9_MOUSE Tetraspanin-9 OS=Mus musculus GN=Tspan9 PE=1 SV=1
Length = 239
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 32/110 (29%)
Query: 4 RGCLECL---LKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + + G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYTMFLFNLIFWLCGCGLLGVGIWLSVS---QGNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
L A +L I +G ++ V +GC+GA N C L
Sbjct: 50 SLSAANLV----------------IAIGTIVMVTGFLGCLGAIKENKCLL 83
>sp|P16297|IL2RB_MOUSE Interleukin-2 receptor subunit beta OS=Mus musculus GN=Il2rb PE=2
SV=1
Length = 539
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 28 YGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRPMLMAVSLADSIFDKLPKAWFIYLFIGV 87
Y + + V+ +R +N+GT SP S +P+ AD + + LP +W YL + +
Sbjct: 205 YEVQVRVKAQR-NNTGTWSPWS---------QPLTFRTRPADPMKEILPMSWLRYLLLVL 254
Query: 88 GVVLFVISCV 97
G SCV
Sbjct: 255 GCFSGFFSCV 264
>sp|B3VSC2|TSN9_SHEEP Tetraspanin-9 OS=Ovis aries GN=TSPAN9 PE=2 SV=1
Length = 239
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 32/110 (29%)
Query: 4 RGCLECL---LKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + + G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYAMFLFNLIFWLCGCGLLGVGIWLSVS---QGNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
L A +L I +G ++ V +GC+GA N C L
Sbjct: 50 SLSAANLV----------------IAIGTIVMVTGFLGCLGAIKENRCLL 83
>sp|Q06AA5|TSN9_PIG Tetraspanin-9 OS=Sus scrofa GN=TSPAN9 PE=2 SV=1
Length = 239
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 32/110 (29%)
Query: 4 RGCLECL---LKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + + G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVS---QGNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
L A +L I +G ++ V +GC+GA N C L
Sbjct: 50 SLSAANLV----------------IAIGTIVMVTGFLGCLGAIKENRCLL 83
>sp|B0BM39|TSN9_XENTR Tetraspanin-9 OS=Xenopus tropicalis GN=tspan9 PE=2 SV=1
Length = 239
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 32/108 (29%)
Query: 4 RGCLECL---LKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + + G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVS---QGNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGC 108
L A +L I +G ++ V +GC+GA N C
Sbjct: 50 SLSAANLV----------------IAIGTIVMVTGFLGCLGAIKENKC 81
>sp|Q29605|CP19A_RABIT Cytochrome P450 19A1 OS=Oryctolagus cuniculus GN=CYP19A1 PE=2 SV=1
Length = 503
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 16/66 (24%)
Query: 59 RPMLMAVSLADS--IFDKLPKAW------FIYLFIGVGVVLFVISCVGCIG--------A 102
+P L + + ++ IF+ P W F+ G G+V V CVG IG
Sbjct: 119 KPGLQCIGMHENGIIFNNNPALWKVVRPFFMKALTGPGLVQMVAICVGSIGRHLDKLEEV 178
Query: 103 TTRNGC 108
TTR+GC
Sbjct: 179 TTRSGC 184
>sp|Q99J59|TSN1_MOUSE Tetraspanin-1 OS=Mus musculus GN=Tspan1 PE=2 SV=1
Length = 240
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 24/110 (21%)
Query: 1 MACRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
M C ++ ++ L N L+ + G A++ GI++ +V S + F L
Sbjct: 1 MQCFKFIKVMMFLFNLLIFLCGAALLAVGIWV-----------SVDGTSFLKVFGSLSSS 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
+ V++ Y I G VLF++ +GC GA + N C L
Sbjct: 50 AMQFVNVG-------------YFLIAAGAVLFILGFLGCYGAHSENKCVL 86
>sp|P35762|CD81_MOUSE CD81 antigen OS=Mus musculus GN=Cd81 PE=1 SV=2
Length = 236
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 26/110 (23%)
Query: 3 CRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRPML 62
C C++ LL + NF+ + G ++G ++L R D P + +++LG
Sbjct: 6 CTKCIKYLLFVFNFVFWLAGGVILGVALWL-----RHD------PQTTSLLYLELGNK-- 52
Query: 63 MAVSLADSIFDKLPKAWF--IYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
P ++ IY+ I VG V+ + +GC GA + C L
Sbjct: 53 -----------PAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLL 91
>sp|P19397|CD53_HUMAN Leukocyte surface antigen CD53 OS=Homo sapiens GN=CD53 PE=1 SV=1
Length = 219
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 30/110 (27%)
Query: 1 MACRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
M+ L+ +L N L I G ++G+GIYL + +N G
Sbjct: 3 MSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLIH----NNFGV---------------- 42
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
+F LP +F+ VG ++ V++ +GC+G+ N C L
Sbjct: 43 ----------LFHNLPSLTLGNVFVIVGSIIMVVAFLGCMGSIKENKCLL 82
>sp|O60635|TSN1_HUMAN Tetraspanin-1 OS=Homo sapiens GN=TSPAN1 PE=1 SV=2
Length = 241
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 1 MACRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDE-GFVQLGR 59
M C ++ ++ L N L+ + G A++ GI++ ++ A P+S FV +G
Sbjct: 1 MQCFSFIKTMMILFNLLIFLCGAALLAVGIWVSID--GASFLKIFGPLSSSAMQFVNVG- 57
Query: 60 PMLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
Y I GVV+F + +GC GA T + C L
Sbjct: 58 ----------------------YFLIAAGVVVFALGFLGCYGAKTESKCAL 86
>sp|Q5RC27|TSN1_PONAB Tetraspanin-1 OS=Pongo abelii GN=TSPAN1 PE=2 SV=1
Length = 241
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 1 MACRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDE-GFVQLGR 59
M C ++ ++ L N L+ + G A++ GI++ ++ A P+S FV +G
Sbjct: 1 MQCFSFIKTMMILFNLLIFLCGAALLAVGIWVSID--GASFLKIFGPLSSSAMQFVNVG- 57
Query: 60 PMLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
Y I GVV+F + +GC GA T + C L
Sbjct: 58 ----------------------YFLIAAGVVVFALGFLGCYGAKTESKCAL 86
>sp|P40239|CD9_FELCA CD9 antigen OS=Felis catus GN=CD9 PE=2 SV=2
Length = 226
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 34/109 (31%)
Query: 6 CLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRPMLMAV 65
C++ LL NF+ + G+A++ G++L R D
Sbjct: 9 CIKYLLFGFNFIFWLAGIAVLAVGLWL-----RFD------------------------- 38
Query: 66 SLADSIF--DKLPKAWF--IYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
S SIF D P +++ +Y+ IG G ++ ++ +GC GA + C L
Sbjct: 39 SQTKSIFEQDSQPSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCML 87
>sp|Q17QJ5|TSN5_BOVIN Tetraspanin-5 OS=Bos taurus GN=TSPAN5 PE=2 SV=1
Length = 268
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 6 CLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRPMLMAV 65
C++ + N + +G+A +G G++ + E N +++ + G
Sbjct: 14 CIKYFIFGFNVIFWFLGIAFLGIGLWAWNEKGVLSNISSITDLGG--------------- 58
Query: 66 SLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCLTCVSLVL 117
FD ++LF+ VG V+F++ GCIGA N L S+ L
Sbjct: 59 ------FDP------VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFL 98
>sp|Q6DCQ3|TSN9_XENLA Tetraspanin-9 OS=Xenopus laevis GN=tspan9 PE=2 SV=1
Length = 239
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 32/108 (29%)
Query: 4 RGCLECL---LKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
RGCL CL + L N + + G ++G GI+L V N T SP P
Sbjct: 3 RGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVS---QGNFATFSP----------SFP 49
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGC 108
L A +L I +G V+ V +GC+GA N C
Sbjct: 50 SLSAANLV----------------IVIGTVVMVTGFLGCLGAIKENKC 81
>sp|Q9JJW1|TSN2_RAT Tetraspanin-2 OS=Rattus norvegicus GN=Tspan2 PE=1 SV=1
Length = 221
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 33/112 (29%)
Query: 4 RGCLECLLKLL---NFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
RG L C+ LL N L + G A++ +G++ GT+ +S +E
Sbjct: 5 RGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWF-------RFGGTIKDLSSEE-------- 49
Query: 61 MLMAVSLADSIFDKLPKAWFI--YLFIGVGVVLFVISCVGCIGATTRNGCCL 110
K P+ +++ Y+ +G G ++ + GC GA + C L
Sbjct: 50 -------------KSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVL 88
>sp|Q922J6|TSN2_MOUSE Tetraspanin-2 OS=Mus musculus GN=Tspan2 PE=1 SV=1
Length = 221
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 33/112 (29%)
Query: 4 RGCLECLLKLL---NFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
RG L C+ LL N L + G A++ +G++ GT+ +S +
Sbjct: 5 RGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRF-------GGTMKDLSSE--------- 48
Query: 61 MLMAVSLADSIFDKLPKAWFI--YLFIGVGVVLFVISCVGCIGATTRNGCCL 110
DK P+ +++ Y+ +G G ++ + GC GA + C L
Sbjct: 49 ------------DKSPEYFYVGLYVLVGAGALMMTVGFFGCCGAMRESQCVL 88
>sp|Q9K0I2|PPSA_NEIMB Phosphoenolpyruvate synthase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=ppsA PE=1 SV=1
Length = 794
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 44 TVSPVSGDEGFVQLGRPMLMAVSLADSIFDKLPKA 78
TVS GD GF+ G L+ V + D D +PKA
Sbjct: 452 TVSCAEGDTGFIYAG---LLDVQITDVALDNMPKA 483
>sp|Q54ER4|ATR1_DICDI Probable serine/threonine-protein kinase atr1 OS=Dictyostelium
discoideum GN=atr1 PE=3 SV=1
Length = 3157
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 1 MACRGCLECLLKLLNFLLTIVGLAMVGYG 29
MACRG ++ LK+ ++LL +V L ++ YG
Sbjct: 1924 MACRGIIKDDLKICHYLLPLVILNIIEYG 1952
>sp|Q6GMK6|TSN9_DANRE Tetraspanin-9 OS=Danio rerio GN=tspan9 PE=2 SV=1
Length = 239
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 32/110 (29%)
Query: 4 RGCLEC---LLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDEGFVQLGRP 60
RGCL C ++ L N L + G ++G GI+L V + G+ + S P
Sbjct: 3 RGCLCCVKYMMFLFNLLFWLSGCGLLGVGIWLSV------SQGSFATFS----------P 46
Query: 61 MLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
++S A+ L I +G V+ V +GC+GA N C L
Sbjct: 47 SFPSLSAAN-------------LVITLGSVVMVTGFLGCLGAIKENKCLL 83
>sp|Q86UF1|TSN33_HUMAN Tetraspanin-33 OS=Homo sapiens GN=TSPAN33 PE=2 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 83 LFIGVGVVLFVISCVGCIGATTRNGCCLTCVSLVL 117
L I VGV++F+++ GCIG+ N C L SL L
Sbjct: 67 LLIVVGVLMFLLTFCGCIGSLRENICLLQTFSLCL 101
>sp|Q8R3S2|TSN33_MOUSE Tetraspanin-33 OS=Mus musculus GN=Tspan33 PE=1 SV=1
Length = 283
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 83 LFIGVGVVLFVISCVGCIGATTRNGCCLTCVSLVL 117
L I VGV++F+++ GCIG+ N C L SL L
Sbjct: 67 LLIVVGVLMFLLTFCGCIGSLRENICLLQTFSLCL 101
>sp|P40237|CD82_MOUSE CD82 antigen OS=Mus musculus GN=Cd82 PE=1 SV=1
Length = 266
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 82 YLFIGVGVVLFVISCVGCIGATTRNGCCL 110
Y+FIGVG + V+ +GCIGA C L
Sbjct: 57 YVFIGVGAITIVMGFLGCIGAVNEVRCLL 85
>sp|Q4R7W6|TSN1_MACFA Tetraspanin-1 OS=Macaca fascicularis GN=TSPAN1 PE=2 SV=1
Length = 240
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 26/111 (23%)
Query: 1 MACRGCLECLLKLLNFLLTIVGLAMVGYGIYLFVEYKRADNSGTVSPVSGDE-GFVQLGR 59
M C ++ ++ L N L+ + G A++ GI++ ++ A P+S FV +G
Sbjct: 1 MQCFSFIKTIMILFNLLIFLCGAALLAVGIWVSID--GASFLKIFGPLSSSAMQFVNVG- 57
Query: 60 PMLMAVSLADSIFDKLPKAWFIYLFIGVGVVLFVISCVGCIGATTRNGCCL 110
Y I G V+F + +GC GA T + C L
Sbjct: 58 ----------------------YFLIAAGAVVFALGFLGCYGAQTESKCAL 86
>sp|Q3SYV5|TSN33_BOVIN Tetraspanin-33 OS=Bos taurus GN=TSPAN33 PE=2 SV=1
Length = 283
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 83 LFIGVGVVLFVISCVGCIGATTRNGCCLTCVSLVL 117
L I VG+++F+++ GCIG+ N C L SL L
Sbjct: 67 LLIVVGILMFLLTFCGCIGSLRENICLLQTFSLCL 101
>sp|P27701|CD82_HUMAN CD82 antigen OS=Homo sapiens GN=CD82 PE=1 SV=1
Length = 267
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 82 YLFIGVGVVLFVISCVGCIGATTRNGCCL 110
Y+FIGVG V ++ +GCIGA C L
Sbjct: 57 YVFIGVGAVTMLMGFLGCIGAVNEVRCLL 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.147 0.472
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,177,514
Number of Sequences: 539616
Number of extensions: 1583839
Number of successful extensions: 4838
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4702
Number of HSP's gapped (non-prelim): 120
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)