Your job contains 1 sequence.
>038964
MKRIDWETYFLYDRGSLVNDEVFGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFG
LLTSETKYTNTYLLETFLRAMNRKNSLRVIINGDQIMSKAMATTFLDSTHK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038964
(111 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121060 - symbol:FRS5 "FAR1-related sequence 5... 145 5.6e-09 1
TAIR|locus:2144930 - symbol:FRS12 "FAR1-related sequence ... 142 1.2e-08 1
TAIR|locus:2082420 - symbol:FRS7 "FAR1-related sequence 7... 140 1.9e-08 1
TAIR|locus:2090394 - symbol:FHY3 "far-red elongated hypoc... 140 2.1e-08 1
TAIR|locus:2014639 - symbol:FRS4 "FAR1-related sequence 4... 139 2.2e-08 1
TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3... 127 5.2e-07 1
TAIR|locus:2121003 - symbol:FRS9 "FAR1-related sequence 9... 124 6.0e-07 1
TAIR|locus:2016259 - symbol:FRS8 "FAR1-related sequence 8... 123 1.1e-06 1
TAIR|locus:2062606 - symbol:FRS2 "FAR1-related sequence 2... 112 2.0e-05 1
TAIR|locus:2129665 - symbol:FAR1 "FAR-RED IMPAIRED RESPON... 112 2.0e-05 1
TAIR|locus:2035144 - symbol:FRS6 "FAR1-related sequence 6... 103 0.00015 1
TAIR|locus:2012828 - symbol:FRS11 "FAR1-related sequence ... 100 0.00030 1
>TAIR|locus:2121060 [details] [associations]
symbol:FRS5 "FAR1-related sequence 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL035538
EMBL:AL161593 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000241939
EMBL:AY136457 IPI:IPI00529649 PIR:T05645 RefSeq:NP_195531.1
UniGene:At.31195 UniGene:At.48951 PRIDE:Q9SZL8
EnsemblPlants:AT4G38180.1 GeneID:829974 KEGG:ath:AT4G38180
TAIR:At4g38180 eggNOG:NOG236180 InParanoid:Q9SZL8 OMA:RNNRQKS
PhylomeDB:Q9SZL8 ProtClustDB:CLSN2685396 Genevestigator:Q9SZL8
Uniprot:Q9SZL8
Length = 788
Score = 145 (56.1 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 31/102 (30%), Positives = 54/102 (52%)
Query: 10 FLYDRGSLVNDEVFGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFGLLTSETKYT 69
F D ++++ FGD TFDTTY++N Y PF G+N H + I F + +ET+ +
Sbjct: 283 FWADPKAIMDFTHFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPILFGCAFIINETEAS 342
Query: 70 NTYLLETFLRAMNRKNSLRVIINGDQIMSKAMATTFLDSTHK 111
+L T+L AM+ + + + D ++ A+ F + H+
Sbjct: 343 FVWLFNTWLAAMSAHPPVSITTDHDAVIRAAIMHVFPGARHR 384
>TAIR|locus:2144930 [details] [associations]
symbol:FRS12 "FAR1-related sequence 12" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC068655
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00546450 RefSeq:NP_197397.1
UniGene:At.22319 UniGene:At.72702 PaxDb:Q3E7I5 PRIDE:Q3E7I5
EnsemblPlants:AT5G18960.1 GeneID:832014 KEGG:ath:AT5G18960
TAIR:At5g18960 eggNOG:NOG292373 HOGENOM:HOG000112649
InParanoid:Q3E7I5 OMA:GSANEAC PhylomeDB:Q3E7I5
ProtClustDB:CLSN2686747 Genevestigator:Q3E7I5 Uniprot:Q3E7I5
Length = 788
Score = 142 (55.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 27/89 (30%), Positives = 49/89 (55%)
Query: 23 FGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFGLLTSETKYTNTYLLETFLRAMN 82
FGD FDT+Y+ +YS PF I+G N H + + ++ E+K +L +T+LRAM+
Sbjct: 396 FGDSVVFDTSYRKGSYSVPFATIIGFNHHRQPVLLGCAMVADESKEAFLWLFQTWLRAMS 455
Query: 83 RKNSLRVIINGDQIMSKAMATTFLDSTHK 111
+ ++ + D + +A+ F + H+
Sbjct: 456 GRRPRSIVADQDLPIQQALVQVFPGAHHR 484
>TAIR|locus:2082420 [details] [associations]
symbol:FRS7 "FAR1-related sequence 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC018907
InterPro:IPR018289 Pfam:PF10551 eggNOG:NOG292373
HOGENOM:HOG000112649 ProtClustDB:CLSN2686747 EMBL:AF360270
EMBL:AY150446 IPI:IPI00534625 RefSeq:NP_566278.1 UniGene:At.19021
UniGene:At.74222 PRIDE:Q9M8J3 EnsemblPlants:AT3G06250.1
GeneID:819799 KEGG:ath:AT3G06250 TAIR:At3g06250 InParanoid:Q9M8J3
OMA:RCGNEIE PhylomeDB:Q9M8J3 Genevestigator:Q9M8J3 Uniprot:Q9M8J3
Length = 764
Score = 140 (54.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 23 FGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFGLLTSETKYTNTYLLETFLRAMN 82
FGD FDT+Y+ YS PF +G N H + + L+ E+K ++L +T+LRAM+
Sbjct: 372 FGDAVVFDTSYRKGDYSVPFATFIGFNHHRQPVLLGGALVADESKEAFSWLFQTWLRAMS 431
Query: 83 RKNSLRVIINGDQIMSKAMATTFLDSTHK 111
+ ++ + D + +A+A F + H+
Sbjct: 432 GRRPRSMVADQDLPIQQAVAQVFPGTHHR 460
>TAIR|locus:2090394 [details] [associations]
symbol:FHY3 "far-red elongated hypocotyls 3" species:3702
"Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009585 "red, far-red light phototransduction" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010017 "red or far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042753 "positive regulation of circadian rhythm"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] InterPro:IPR001000 InterPro:IPR006564
InterPro:IPR007527 PROSITE:PS50966 SMART:SM00575 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0046872 GO:GO:0005975 GO:GO:0007623
GO:GO:0004553 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010218 GO:GO:0009585 GO:GO:0042753 HOGENOM:HOG000090708
InterPro:IPR018289 Pfam:PF10551 EMBL:AP001306 IPI:IPI00519965
RefSeq:NP_001118673.1 RefSeq:NP_188856.2 UniGene:At.27725
STRING:Q9LIE5 PaxDb:Q9LIE5 PRIDE:Q9LIE5 EnsemblPlants:AT3G22170.1
EnsemblPlants:AT3G22170.2 GeneID:821781 KEGG:ath:AT3G22170
TAIR:At3g22170 eggNOG:NOG45392 InParanoid:Q9LIE5 OMA:ITHAERV
PhylomeDB:Q9LIE5 ProtClustDB:PLN03097 Genevestigator:Q9LIE5
Uniprot:Q9LIE5
Length = 839
Score = 140 (54.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 10 FLYDRGSLVNDEVFGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFGLLTSETKYT 69
F D S N F D+ + DTTY N Y P + VG+NQH + + L++ E+ T
Sbjct: 268 FWVDAKSRHNYGSFCDVVSLDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCALISDESAAT 327
Query: 70 NTYLLETFLRAMNRKNSLRVIINGDQIMSKAMATTFLDSTH 110
++L+ET+LRA+ + +I D +M+ + F ++ H
Sbjct: 328 YSWLMETWLRAIGGQAPKVLITELDVVMNSIVPEIFPNTRH 368
>TAIR|locus:2014639 [details] [associations]
symbol:FRS4 "FAR1-related sequence 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009978 EMBL:AC012394 HOGENOM:HOG000090708 InterPro:IPR018289
Pfam:PF10551 EMBL:BT010456 EMBL:AK221406 IPI:IPI00535818
IPI:IPI00657192 PIR:G96790 RefSeq:NP_001031286.1 RefSeq:NP_177759.1
UniGene:At.34672 PaxDb:Q6NQJ7 PRIDE:Q6NQJ7 GeneID:843965
KEGG:ath:AT1G76320 TAIR:At1g76320 eggNOG:NOG261993
InParanoid:Q9SGQ3 OMA:KIGCKAS ProtClustDB:CLSN2682748
Genevestigator:Q6NQJ7 Uniprot:Q6NQJ7
Length = 732
Score = 139 (54.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 27/101 (26%), Positives = 55/101 (54%)
Query: 10 FLYDRGSLVNDEVFGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFGLLTSETKYT 69
F D + + + F D+ +F+T+Y + Y P V+ VG+N H++ + GLL +T YT
Sbjct: 196 FWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVLFVGVNHHVQPVLLGCGLLADDTVYT 255
Query: 70 NTYLLETFLRAMNRKNSLRVIINGDQIMSKAMATTFLDSTH 110
+L++++L AM + ++ + + + A+A ++ H
Sbjct: 256 YVWLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAVLPETRH 296
>TAIR|locus:2059304 [details] [associations]
symbol:FRS3 "FAR1-related sequence 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
Length = 851
Score = 127 (49.8 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 10 FLYDRGSLVNDEVFGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFGLLTSETKYT 69
F D S V FGD T DT Y+ N + PF G+N H + I F L+ E+ +
Sbjct: 230 FWADSRSRVAYTHFGDTVTLDTRYRCNQFRVPFAPFTGVNHHGQAILFGCALILDESDTS 289
Query: 70 NTYLLETFLRAMNRKNSLRVIINGDQIMSKAMATTFLDSTH 110
+L +TFL AM + + ++ + D+ + A F + H
Sbjct: 290 FIWLFKTFLTAMRDQPPVSLVTDQDRAIQIAAGQVFPGARH 330
>TAIR|locus:2121003 [details] [associations]
symbol:FRS9 "FAR1-related sequence 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL035538 EMBL:AL161593 InterPro:IPR018289
Pfam:PF10551 HOGENOM:HOG000241939 UniGene:At.31195 UniGene:At.48951
EMBL:BX827635 EMBL:AK229615 IPI:IPI00517549 PIR:T05644
RefSeq:NP_195530.2 PaxDb:Q9SZL7 PRIDE:Q9SZL7
EnsemblPlants:AT4G38170.1 GeneID:829973 KEGG:ath:AT4G38170
TAIR:At4g38170 eggNOG:NOG320990 InParanoid:Q9SZL7 OMA:RCEVYRA
Genevestigator:Q9SZL7 Uniprot:Q9SZL7
Length = 545
Score = 124 (48.7 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 5 DWETYFLYDRGSLVNDEVFGDIPTFDTTYQTNA-YSKPFVVIVGINQHIETISFLFGLLT 63
D F D +N FGD FDTTY+ Y PF G N H + + F L+
Sbjct: 42 DCGNVFWADPTCRLNYTYFGDTLVFDTTYRRGKRYQVPFAAFTGFNHHGQPVLFGCALIL 101
Query: 64 SETKYTNTYLLETFLRAMNRKNSLRVIINGDQIMSKAMATTF 105
+E++ + +L +T+L+AM+ + + D+++ A++ F
Sbjct: 102 NESESSFAWLFQTWLQAMSAPPPPSITVEPDRLIQVAVSRVF 143
>TAIR|locus:2016259 [details] [associations]
symbol:FRS8 "FAR1-related sequence 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009322 EMBL:AC011717 InterPro:IPR018289 Pfam:PF10551
HOGENOM:HOG000112651 IPI:IPI00534750 PIR:E96831 RefSeq:NP_178118.2
UniGene:At.52575 PRIDE:Q9S793 EnsemblPlants:AT1G80010.1
GeneID:844341 KEGG:ath:AT1G80010 TAIR:At1g80010 eggNOG:NOG311954
InParanoid:Q9S793 OMA:FAIRVKS Genevestigator:Q9S793 Uniprot:Q9S793
Length = 725
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 23 FGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFGLLTSETKYTNTYLLETFLRAMN 82
FGD+ FDTT +NAY P V VGIN H +TI GLL ++ T +L +L M
Sbjct: 318 FGDVLLFDTTCLSNAYELPLVAFVGINHHGDTILLGCGLLADQSFETYVWLFRAWLTCML 377
Query: 83 RKNSLRVIINGDQIMSKAMATTFLDSTHK 111
+ I + M A++ F + H+
Sbjct: 378 GRPPQIFITEQCKAMRTAVSEVFPRAHHR 406
>TAIR|locus:2062606 [details] [associations]
symbol:FRS2 "FAR1-related sequence 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC005700
HOGENOM:HOG000090708 InterPro:IPR018289 Pfam:PF10551 EMBL:AK228730
EMBL:AK221503 IPI:IPI00520357 IPI:IPI00530517 PIR:G84730
RefSeq:NP_001077991.1 RefSeq:NP_001118431.1 RefSeq:NP_180784.2
RefSeq:NP_973580.1 UniGene:At.13189 UniGene:At.67147
EnsemblPlants:AT2G32250.1 EnsemblPlants:AT2G32250.3 GeneID:817785
KEGG:ath:AT2G32250 TAIR:At2g32250 eggNOG:NOG304016
InParanoid:Q3EBQ3 OMA:CKHAILV PhylomeDB:Q3EBQ3
ProtClustDB:CLSN2681190 Genevestigator:Q3EBQ3 Uniprot:Q3EBQ3
Length = 807
Score = 112 (44.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 24/88 (27%), Positives = 45/88 (51%)
Query: 23 FGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFGLLTSETKYTNTYLLETFLRAMN 82
F D+ FDT Y N Y PF +G++ H + + L+ ++ T ++L T+L+A+
Sbjct: 216 FSDVVLFDTFYVRNGYRIPFAPFIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVG 275
Query: 83 RKNSLRVIINGDQIMSKAMATTFLDSTH 110
+ +I + D+++S + F D H
Sbjct: 276 GQAPGVMITDQDKLLSDIVVEVFPDVRH 303
>TAIR|locus:2129665 [details] [associations]
symbol:FAR1 "FAR-RED IMPAIRED RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0010018 "far-red light
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0010218 "response
to far red light" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;IDA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IMP] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010212
"response to ionizing radiation" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 EMBL:AL161540 EMBL:Z97337 GO:GO:0010018
GO:GO:0042753 PIR:F71414 PIR:T02124 EMBL:AF159587 IPI:IPI00546816
RefSeq:NP_567455.4 UniGene:At.11570 IntAct:Q9SWG3 STRING:Q9SWG3
PaxDb:Q9SWG3 PRIDE:Q9SWG3 EnsemblPlants:AT4G15090.1 GeneID:827173
KEGG:ath:AT4G15090 TAIR:At4g15090 eggNOG:NOG306101
HOGENOM:HOG000090708 InParanoid:Q9SWG3 OMA:LNLMEPP PhylomeDB:Q9SWG3
ProtClustDB:CLSN2716659 Genevestigator:Q9SWG3 InterPro:IPR018289
Pfam:PF10551 Uniprot:Q9SWG3
Length = 827
Score = 112 (44.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 23/88 (26%), Positives = 46/88 (52%)
Query: 23 FGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFGLLTSETKYTNTYLLETFLRAMN 82
F D+ +FDTTY P + +G+N H + + L+ E+ T +L++T+LRAM
Sbjct: 272 FNDVVSFDTTYVKFNDKLPLALFIGVNHHSQPMLLGCALVADESMETFVWLIKTWLRAMG 331
Query: 83 RKNSLRVIINGDQIMSKAMATTFLDSTH 110
+ ++ + D+ + A++ ++ H
Sbjct: 332 GRAPKVILTDQDKFLMSAVSELLPNTRH 359
>TAIR|locus:2035144 [details] [associations]
symbol:FRS6 "FAR1-related sequence 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC008016 InterPro:IPR018289 Pfam:PF10551 EMBL:AY080775
EMBL:AY133776 IPI:IPI00532825 PIR:G96565 RefSeq:NP_175661.1
UniGene:At.37583 PRIDE:Q9SSQ4 EnsemblPlants:AT1G52520.1
GeneID:841683 KEGG:ath:AT1G52520 TAIR:At1g52520 eggNOG:NOG287780
HOGENOM:HOG000112651 InParanoid:Q9SSQ4 OMA:LELMCCK PhylomeDB:Q9SSQ4
ProtClustDB:CLSN2679731 Genevestigator:Q9SSQ4 Uniprot:Q9SSQ4
Length = 703
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 10 FLYDRGSLVNDEVFGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFGLLTSETKYT 69
F D S V+ FGD+ D++Y + + P V G+N H +T G L ET +
Sbjct: 281 FWADAFSKVSCSYFGDVIFIDSSYISGKFEIPLVTFTGVNHHGKTTLLSCGFLAGETMES 340
Query: 70 NTYLLETFLRAMNR 83
+LL+ +L M R
Sbjct: 341 YHWLLKVWLSVMKR 354
>TAIR|locus:2012828 [details] [associations]
symbol:FRS11 "FAR1-related sequence 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC005489 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000006468
ProtClustDB:CLSN2687754 EMBL:AF424595 EMBL:BT000486 IPI:IPI00517858
RefSeq:NP_563865.1 UniGene:At.26302 IntAct:Q9SY66 PaxDb:Q9SY66
PRIDE:Q9SY66 EnsemblPlants:AT1G10240.1 GeneID:837563
KEGG:ath:AT1G10240 TAIR:At1g10240 eggNOG:NOG258635
InParanoid:Q9SY66 OMA:IRRHRTE PhylomeDB:Q9SY66
Genevestigator:Q9SY66 Uniprot:Q9SY66
Length = 680
Score = 100 (40.3 bits), Expect = 0.00030, P = 0.00030
Identities = 26/89 (29%), Positives = 47/89 (52%)
Query: 16 SLVNDEVFGDIPTFDTTYQTNAYSKPFVVIVGINQHIETISFLFG--LLTSETKYTNTYL 73
S+ + E+FGD FDTT++ +A P + VG+N + + FG LL E + ++
Sbjct: 267 SIQSYELFGDAVVFDTTHRLSAVEMPLGIWVGVNNY--GVPCFFGCVLLRDENLRSWSWA 324
Query: 74 LETFLRAMNRKNSLRVIINGDQIMSKAMA 102
L+ F MN K ++ + + + +A+A
Sbjct: 325 LQAFTGFMNGKAPQTILTDHNMCLKEAIA 353
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 111 111 0.00091 102 3 11 22 0.41 30
29 0.42 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 550 (59 KB)
Total size of DFA: 114 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.09u 0.11s 11.20t Elapsed: 00:00:00
Total cpu time: 11.09u 0.11s 11.20t Elapsed: 00:00:00
Start: Tue May 21 01:18:47 2013 End: Tue May 21 01:18:47 2013