Query 038968
Match_columns 206
No_of_seqs 109 out of 672
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 08:00:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038968.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038968hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p94_A GDSL-like lipase; serin 38.0 99 0.0034 22.7 6.8 80 99-203 96-185 (204)
2 3enc_A Protein PCC1; dimerizat 32.6 27 0.00092 24.3 2.4 18 99-116 64-81 (87)
3 2hsj_A Putative platelet activ 26.4 2E+02 0.0067 21.3 6.9 33 99-133 104-136 (214)
4 3r6w_A FMN-dependent NADH-azor 23.8 23 0.00079 27.5 0.9 21 54-74 80-100 (212)
5 2lul_A Tyrosine-protein kinase 22.7 1E+02 0.0035 23.0 4.4 33 106-140 109-141 (164)
6 2yvc_D Neprilysin; protein-pep 20.6 27 0.00091 18.5 0.4 13 186-198 6-18 (26)
7 1yzf_A Lipase/acylhydrolase; s 20.3 44 0.0015 24.4 1.8 76 99-203 88-172 (195)
8 2q0q_A ARYL esterase; SGNH hyd 20.0 57 0.002 24.4 2.4 33 169-203 164-198 (216)
9 3dc7_A Putative uncharacterize 19.6 2.9E+02 0.0099 20.7 6.8 34 168-203 161-206 (232)
10 3dci_A Arylesterase; SGNH_hydr 19.2 3E+02 0.01 20.8 8.0 86 99-203 122-212 (232)
No 1
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=38.04 E-value=99 Score=22.69 Aligned_cols=80 Identities=15% Similarity=0.187 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceeEEEeeccCCCcCCCCCCCCCCCCCcCccccCCCCCcCCCCCCchHHHHHHHHHHh
Q 038968 99 PVAYARVLKTWSKWVEQNVDPNRTTVFFGSTSPLHIKSLDWENPDGIKCALETTPITNLSMPLNVGTDRRLFVVASNVTR 178 (206)
Q Consensus 99 ~~Ayr~al~t~~~wi~~~~~~~~~~vffRt~SP~Hf~~g~Wn~~~GG~C~~~T~P~~~~~~~~~~~~~~~~~~i~~~v~~ 178 (206)
.+.|+..++.+++.+.+ + ...+++-|..|..- ..|.. . . . .. ..-..++..+.++.+
T Consensus 96 ~~~~~~~~~~~i~~~~~---~-~~~vil~~~~p~~~--~~~~~--~----------~--~--~~-~~~~~~n~~l~~~a~ 152 (204)
T 3p94_A 96 LENVFGNLVSMAELAKA---N-HIKVIFCSVLPAYD--FPWRP--G----------M--Q--PA-DKVIQLNKWIKEYAD 152 (204)
T ss_dssp HHHHHHHHHHHHHHHHH---T-TCEEEEECCCCCSC--BTTBT--T----------C--C--CH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh---C-CCeEEEEeCCCCCC--CCCCc--c----------c--c--HH-HHHHHHHHHHHHHHH
Confidence 45677778877777654 2 34677778766541 12321 0 0 0 00 011234555555555
Q ss_pred cCCcceEEeeccccc---------ccCcCC-CCCC
Q 038968 179 SMKVPVHFINITTLS---------EYRKDG-HTAV 203 (206)
Q Consensus 179 ~~~~~v~lLdIT~ls---------~~R~Dg-HPs~ 203 (206)
+. .+.++|+...+ .+-.|| ||+.
T Consensus 153 ~~--~v~~iD~~~~~~~~~~~~~~~~~~Dg~Hp~~ 185 (204)
T 3p94_A 153 KN--GLTYVDYHSAMKDERNGLPANLSKDGVHPTL 185 (204)
T ss_dssp HT--TCEEECHHHHHCCTTSSCCTTTBSSSSSBCH
T ss_pred Hc--CCcEEchhhhhhcccccccccccCCCCCcCH
Confidence 43 68899987654 345665 7763
No 2
>3enc_A Protein PCC1; dimerization domain, keops, telomere, unknown function; 2.63A {Pyrococcus furiosus} PDB: 3eno_C
Probab=32.62 E-value=27 Score=24.32 Aligned_cols=18 Identities=11% Similarity=0.501 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 038968 99 PVAYARVLKTWSKWVEQN 116 (206)
Q Consensus 99 ~~Ayr~al~t~~~wi~~~ 116 (206)
..++|.+|.||++||.-.
T Consensus 64 ~~aLRA~lNs~lRlI~vA 81 (87)
T 3enc_A 64 SSALRGTVNSYLRWIKAA 81 (87)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 349999999999999643
No 3
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=26.44 E-value=2e+02 Score=21.27 Aligned_cols=33 Identities=18% Similarity=0.127 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceeEEEeeccCCC
Q 038968 99 PVAYARVLKTWSKWVEQNVDPNRTTVFFGSTSPLH 133 (206)
Q Consensus 99 ~~Ayr~al~t~~~wi~~~~~~~~~~vffRt~SP~H 133 (206)
.+.|+..++..++.+.+.. | ...+++-+..|..
T Consensus 104 ~~~~~~~l~~~i~~l~~~~-p-~~~iil~~~~p~~ 136 (214)
T 2hsj_A 104 VNEALNNLEAIIQSVARDY-P-LTEIKLLSILPVN 136 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHC-T-TCEEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHHHHhC-C-CCeEEEEecCCCC
Confidence 3467778888887776543 3 3467787876654
No 4
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=23.76 E-value=23 Score=27.54 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=16.9
Q ss_pred hhhcCCCCccEEEEeeccccc
Q 038968 54 KHGQNWKNVDYLIFNTYIWWM 74 (206)
Q Consensus 54 ~~~~~w~~~DvlVfntGhWw~ 74 (206)
.....+..+|.|||.+=-||.
T Consensus 80 ~~~~~l~~AD~iV~~~P~y~~ 100 (212)
T 3r6w_A 80 QLVGELFDSDLLVISTPMYNF 100 (212)
T ss_dssp HHHHHHHHCSEEEEEEECBTT
T ss_pred HHHHHHHhCCEEEEEcCcccc
Confidence 334557789999999999995
No 5
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=22.74 E-value=1e+02 Score=23.00 Aligned_cols=33 Identities=12% Similarity=0.238 Sum_probs=21.0
Q ss_pred HHHHHHHHHhhCCCCceeEEEeeccCCCcCCCCCC
Q 038968 106 LKTWSKWVEQNVDPNRTTVFFGSTSPLHIKSLDWE 140 (206)
Q Consensus 106 l~t~~~wi~~~~~~~~~~vffRt~SP~Hf~~g~Wn 140 (206)
+..|++.|.+.+..+..+ ...|=|.+|.+|.|-
T Consensus 109 ~~~Wi~aL~~~i~~n~~~--~~~yHpg~~~~~~w~ 141 (164)
T 2lul_A 109 RDLWVKKLKEEIKNNNNI--MIKYHPKFWTDGSYQ 141 (164)
T ss_dssp HHHHHHHHHHHHTTCSCC--CSEECCSCCCTTCCC
T ss_pred HHHHHHHHHHHHHHChhh--hhhcCCCcccCCeEe
Confidence 345555555544443332 357999999999994
No 6
>2yvc_D Neprilysin; protein-peptide complex, cell adhesion; 3.20A {Mus musculus}
Probab=20.63 E-value=27 Score=18.51 Aligned_cols=13 Identities=15% Similarity=0.304 Sum_probs=10.0
Q ss_pred EeecccccccCcC
Q 038968 186 FINITTLSEYRKD 198 (206)
Q Consensus 186 lLdIT~ls~~R~D 198 (206)
-+|||.++.-||-
T Consensus 6 qmditdinapkpk 18 (26)
T 2yvc_D 6 QMDITDINAPKPK 18 (26)
T ss_pred ccccccccCCCcc
Confidence 4789998887764
No 7
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=20.34 E-value=44 Score=24.37 Aligned_cols=76 Identities=14% Similarity=0.091 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceeEEEeeccCCCcCCCCCCCCCCCCCcCccccCCCCCcCCCCCCchHHHHHHHHHHh
Q 038968 99 PVAYARVLKTWSKWVEQNVDPNRTTVFFGSTSPLHIKSLDWENPDGIKCALETTPITNLSMPLNVGTDRRLFVVASNVTR 178 (206)
Q Consensus 99 ~~Ayr~al~t~~~wi~~~~~~~~~~vffRt~SP~Hf~~g~Wn~~~GG~C~~~T~P~~~~~~~~~~~~~~~~~~i~~~v~~ 178 (206)
.+.|+..++..++.+. ...+++-+..|... .| |. .. .. ..-...++.+.++.+
T Consensus 88 ~~~~~~~l~~~i~~~~------~~~vi~~~~~p~~~---~~-------~~--------~~--~~-~~~~~~n~~~~~~a~ 140 (195)
T 1yzf_A 88 VATFRENLETMIHEIG------SEKVILITPPYADS---GR-------RP--------ER--PQ-TRIKELVKVAQEVGA 140 (195)
T ss_dssp HHHHHHHHHHHHHHHC------GGGEEEECCCCCCT---TT-------CT--------TS--CH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc------CCEEEEEcCCCCcc---cc-------ch--------hh--hH-HHHHHHHHHHHHHHH
Confidence 3567777777776652 34577777766431 11 11 00 00 001123455555555
Q ss_pred cCCcceEEeeccccc--------ccCcCC-CCCC
Q 038968 179 SMKVPVHFINITTLS--------EYRKDG-HTAV 203 (206)
Q Consensus 179 ~~~~~v~lLdIT~ls--------~~R~Dg-HPs~ 203 (206)
+. .+.++|+.... .+-.|| ||+.
T Consensus 141 ~~--~~~~iD~~~~~~~~~~~~~~~~~Dg~Hp~~ 172 (195)
T 1yzf_A 141 AH--NLPVIDLYKAMTVYPGTDEFLQADGLHFSQ 172 (195)
T ss_dssp HT--TCCEECHHHHHHHSTTGGGGBCTTSSSBCH
T ss_pred Hh--CCeEEehHHHHhhcCCccccccCCCCCcCH
Confidence 43 57888987653 377898 9974
No 8
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=20.00 E-value=57 Score=24.40 Aligned_cols=33 Identities=27% Similarity=0.269 Sum_probs=21.8
Q ss_pred HHHHHHHHHhcCCcceEEeecccccc-cCcCC-CCCC
Q 038968 169 LFVVASNVTRSMKVPVHFINITTLSE-YRKDG-HTAV 203 (206)
Q Consensus 169 ~~~i~~~v~~~~~~~v~lLdIT~ls~-~R~Dg-HPs~ 203 (206)
++.++.++.++. .+.++|+..... +..|| ||+.
T Consensus 164 ~n~~~~~~a~~~--~v~~iD~~~~~~~~~~Dg~Hpn~ 198 (216)
T 2q0q_A 164 LARVYSALASFM--KVPFFDAGSVISTDGVDGIHFTE 198 (216)
T ss_dssp HHHHHHHHHHHH--TCCEEEGGGTCCCCSTTSSSCCH
T ss_pred HHHHHHHHHHHc--CCcEEchhHhcccCCCCccCcCH
Confidence 455555555543 477899987654 67885 9974
No 9
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=19.59 E-value=2.9e+02 Score=20.73 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhcCCcceEEeecccccc-----------cCcCC-CCCC
Q 038968 168 RLFVVASNVTRSMKVPVHFINITTLSE-----------YRKDG-HTAV 203 (206)
Q Consensus 168 ~~~~i~~~v~~~~~~~v~lLdIT~ls~-----------~R~Dg-HPs~ 203 (206)
+.++++.++.++. .+.++|+...+. +-+|| ||+.
T Consensus 161 ~~~~~i~~~a~~~--~v~~iD~~~~~~~~~~~~~~~~~~~~DgvHpn~ 206 (232)
T 3dc7_A 161 DYEAAIAQMTADY--GVPHLSLYRDAGMTFAIPAQAAIYSVDTLHPNN 206 (232)
T ss_dssp HHHHHHHHHHHHH--TCCEEEHHHHSSCCTTSHHHHHHHBSSSSSBCH
T ss_pred HHHHHHHHHHHHc--CCcEEecccccCCCccchhhhhhccCCCCCCCH
Confidence 4556666665543 577888877644 45676 8874
No 10
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=19.20 E-value=3e+02 Score=20.80 Aligned_cols=86 Identities=13% Similarity=0.099 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCC---CceeEEEeeccCCCcCCCCCCCCCCCCCcCccccCCCCCcCCCCCCchHHHHHHHH
Q 038968 99 PVAYARVLKTWSKWVEQNVDP---NRTTVFFGSTSPLHIKSLDWENPDGIKCALETTPITNLSMPLNVGTDRRLFVVASN 175 (206)
Q Consensus 99 ~~Ayr~al~t~~~wi~~~~~~---~~~~vffRt~SP~Hf~~g~Wn~~~GG~C~~~T~P~~~~~~~~~~~~~~~~~~i~~~ 175 (206)
.+.|+..|+..++.+.+.... ....+++-+..|.....| ..... .... .....++.++.+
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~~~~~~--------~~~~~----~~~~-----~~~~~~~~~~~~ 184 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPCVAGPG--------GEPAG----GRDI-----EQSMRLAPLYRK 184 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCCCCCTT--------SSCGG----GCCH-----HHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCcCcccC--------ccccc----ccHH-----HHHHHHHHHHHH
Confidence 457888888888887653210 234566666433322111 11100 0000 001124555556
Q ss_pred HHhcCCcceEEeeccccc-ccCcCC-CCCC
Q 038968 176 VTRSMKVPVHFINITTLS-EYRKDG-HTAV 203 (206)
Q Consensus 176 v~~~~~~~v~lLdIT~ls-~~R~Dg-HPs~ 203 (206)
+.++. .+.++|+.... .+-+|| ||+.
T Consensus 185 ~a~~~--~v~~iD~~~~~~~~~~DgvHpn~ 212 (232)
T 3dci_A 185 LAAEL--GHHFFDAGSVASASPVDGVHLDA 212 (232)
T ss_dssp HHHHH--TCEEEEGGGTCCCCTTTSSSCCH
T ss_pred HHHHh--CCeEEcchHhcCcccCCCCCcCH
Confidence 65543 57789977654 456788 9874
Done!