Query 038968
Match_columns 206
No_of_seqs 109 out of 672
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 08:00:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038968.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/038968hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3dc7a1 c.23.10.9 (A:18-224) U 38.2 54 0.0039 22.3 7.5 33 169-203 145-189 (207)
2 d2o14a2 c.23.10.8 (A:160-367) 36.3 62 0.0045 22.4 7.8 32 170-203 139-186 (208)
3 d1k7ca_ c.23.10.4 (A:) Rhamnog 23.7 28 0.002 24.5 3.3 34 169-204 151-199 (233)
4 d1rlia_ c.23.5.6 (A:) Hypothet 20.2 12 0.00087 26.1 0.4 28 49-76 55-82 (179)
5 d1w4xa2 c.3.1.5 (A:155-389) Ph 18.2 19 0.0014 25.7 1.2 10 61-70 225-234 (235)
6 d2imja1 d.17.4.23 (A:5-159) Hy 16.8 19 0.0014 25.8 0.9 10 194-203 141-150 (155)
7 d2r5fa1 c.124.1.8 (A:59-316) T 16.1 11 0.00084 28.9 -0.6 51 17-74 110-160 (258)
8 d2j49a1 d.379.1.1 (A:149-282) 16.1 7.6 0.00055 27.3 -1.6 34 101-134 3-61 (134)
9 d2hgsa1 c.30.1.4 (A:202-303) E 15.5 8.1 0.00059 26.1 -1.5 18 123-140 62-80 (102)
10 d1btka_ b.55.1.1 (A:) Bruton's 14.9 33 0.0024 23.9 1.8 33 106-140 120-152 (169)
No 1
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]}
Probab=38.23 E-value=54 Score=22.25 Aligned_cols=33 Identities=12% Similarity=0.069 Sum_probs=19.6
Q ss_pred HHHHHHHHHhcCCcceEEeecccccccC-----------cCC-CCCC
Q 038968 169 LFVVASNVTRSMKVPVHFINITTLSEYR-----------KDG-HTAV 203 (206)
Q Consensus 169 ~~~i~~~v~~~~~~~v~lLdIT~ls~~R-----------~Dg-HPs~ 203 (206)
+..++.++.++ ..+.++|+...+.++ +|| ||+.
T Consensus 145 ~~~~~~~~a~~--~~~~~id~~~~~~~~~~~~~~~~~~~~Dg~Hpn~ 189 (207)
T d3dc7a1 145 YEAAIAQMTAD--YGVPHLSLYRDAGMTFAIPAQAAIYSVDTLHPNN 189 (207)
T ss_dssp HHHHHHHHHHH--HTCCEEEHHHHSSCCTTSHHHHHHHBSSSSSBCH
T ss_pred HHHHHHHHHHh--ceeeeeehhhhhhcccccccchhcCCCCCCCCCH
Confidence 44555555543 357788876555443 477 9974
No 2
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}
Probab=36.33 E-value=62 Score=22.38 Aligned_cols=32 Identities=16% Similarity=0.154 Sum_probs=20.8
Q ss_pred HHHHHHHHhcCCcceEEeecccccc---------------cCcCC-CCCC
Q 038968 170 FVVASNVTRSMKVPVHFINITTLSE---------------YRKDG-HTAV 203 (206)
Q Consensus 170 ~~i~~~v~~~~~~~v~lLdIT~ls~---------------~R~Dg-HPs~ 203 (206)
+.+++++.++. .+.++|+..++. +-+|| ||+.
T Consensus 139 ~~~~~~~a~~~--~v~~vD~~~~~~~~~~~~~~~~~~~~~~~~DgvHpn~ 186 (208)
T d2o14a2 139 RASILALAEEE--KTYLIDLNVLSSAYFTSIGPERTLGLYMDGDTLHPNR 186 (208)
T ss_dssp HHHHHHHHHHT--TCEEECHHHHHHHHHHHHCHHHHHTTBCTTCSSSBBH
T ss_pred HHHHHHhhccC--CcEEeccHHHHHHHHHHhCccccccccCCCCCCCCCH
Confidence 45555565544 577889765542 46898 9985
No 3
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=23.74 E-value=28 Score=24.46 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=22.0
Q ss_pred HHHHHHHHHhcCCcceEEeeccccc--------------ccCcCC-CCCCc
Q 038968 169 LFVVASNVTRSMKVPVHFINITTLS--------------EYRKDG-HTAVY 204 (206)
Q Consensus 169 ~~~i~~~v~~~~~~~v~lLdIT~ls--------------~~R~Dg-HPs~y 204 (206)
+.+.+.+++++. .+.++|+..++ .+.+|| ||+..
T Consensus 151 ~~~~~~~~a~~~--~v~~iDl~~~~~~~~~~~~~~~~~~~~~~DgiHpn~~ 199 (233)
T d1k7ca_ 151 FVEYAELAAEVA--GVEYVDHWSYVDSIYETLGNATVNSYFPIDHTHTSPA 199 (233)
T ss_dssp HHHHHHHHHHHH--TCEEECHHHHHHHHHHHHCHHHHHHTCSSSSSCCCHH
T ss_pred HHHHHHHHHHHc--CCCeeeHHHHHHHHHHHcCchhhhhhcCCCCcCCCHH
Confidence 445555555543 67888976544 266898 99853
No 4
>d1rlia_ c.23.5.6 (A:) Hypothetical protein YwqN {Bacillus subtilis [TaxId: 1423]}
Probab=20.21 E-value=12 Score=26.12 Aligned_cols=28 Identities=21% Similarity=0.408 Sum_probs=20.6
Q ss_pred cccchhhhcCCCCccEEEEeeccccccc
Q 038968 49 PESINKHGQNWKNVDYLIFNTYIWWMNT 76 (206)
Q Consensus 49 ld~~~~~~~~w~~~DvlVfntGhWw~~~ 76 (206)
.|.+++..+.+..+|.+||.|=-||..-
T Consensus 55 ~d~~~~~~~~l~~AD~ii~~sP~y~~~~ 82 (179)
T d1rlia_ 55 QDDYDSIIERILQCHILIFATPIYWFGM 82 (179)
T ss_dssp --CHHHHHHHHHTCSEEEEEEECBTTBC
T ss_pred cHHHHHHHHHHHhCCeEEEeecccCCCc
Confidence 3445566677889999999999998653
No 5
>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}
Probab=18.18 E-value=19 Score=25.70 Aligned_cols=10 Identities=30% Similarity=0.428 Sum_probs=9.2
Q ss_pred CccEEEEeec
Q 038968 61 NVDYLIFNTY 70 (206)
Q Consensus 61 ~~DvlVfntG 70 (206)
.+|+||++||
T Consensus 225 ~~D~VV~ATG 234 (235)
T d1w4xa2 225 ELDSLVLATG 234 (235)
T ss_dssp ECSEEEECCC
T ss_pred cCCEEEeCCC
Confidence 5899999998
No 6
>d2imja1 d.17.4.23 (A:5-159) Hypothetical protein PFL3262 {Pseudomonas fluorescens [TaxId: 294]}
Probab=16.82 E-value=19 Score=25.77 Aligned_cols=10 Identities=30% Similarity=0.491 Sum_probs=8.4
Q ss_pred ccCcCCCCCC
Q 038968 194 EYRKDGHTAV 203 (206)
Q Consensus 194 ~~R~DgHPs~ 203 (206)
--|||.|||.
T Consensus 141 G~RPddhpgL 150 (155)
T d2imja1 141 GRRPDDHPGL 150 (155)
T ss_dssp SSCCTTSCCH
T ss_pred CCCCCCCCCh
Confidence 4599999985
No 7
>d2r5fa1 c.124.1.8 (A:59-316) Transcriptional regulator PSPTO2395 {Pseudomonas syringae [TaxId: 317]}
Probab=16.08 E-value=11 Score=28.91 Aligned_cols=51 Identities=12% Similarity=0.044 Sum_probs=28.4
Q ss_pred CceEEEEEEccccceecCCCCCCccccceeeccccchhhhcCCCCccEEEEeeccccc
Q 038968 17 YNTTVEFYWAPFLVESNSDDPNMHSILNRIIMPESINKHGQNWKNVDYLIFNTYIWWM 74 (206)
Q Consensus 17 yN~Tv~~~wSpfLV~~~~~~~~~~~~~~~~l~ld~~~~~~~~w~~~DvlVfntGhWw~ 74 (206)
++....++-+|.+|....... .++....+..--..|..+|++|+..|.+=.
T Consensus 110 ~~~~~~~l~aP~~~~s~~~~~-------~l~~~~~i~~vl~~~~~~dial~GIG~~~~ 160 (258)
T d2r5fa1 110 LNCPAFLLPSQSIEQSVESKQ-------RIVEMEEVKEVLHRFDSITLAIVGIGELEP 160 (258)
T ss_dssp HTSCEECCCCC-----------------CCHHHHHHHHHHHHTTTCCEEEECCEECC-
T ss_pred cCCceEeccCccccCCHHHHH-------HHHhChhHHHHHHHHhcCCEEEEecCCCCc
Confidence 556667778888886544321 233334455555678999999999999753
No 8
>d2j49a1 d.379.1.1 (A:149-282) TAF5 subunit of TFIID {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=16.05 E-value=7.6 Score=27.30 Aligned_cols=34 Identities=24% Similarity=0.486 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCc-------------------------eeEEEeeccCCCc
Q 038968 101 AYARVLKTWSKWVEQNVDPNR-------------------------TTVFFGSTSPLHI 134 (206)
Q Consensus 101 Ayr~al~t~~~wi~~~~~~~~-------------------------~~vffRt~SP~Hf 134 (206)
.|+.+.....+||+++.|..| .+.||+.+++.|-
T Consensus 3 ~Ye~~y~~Lr~wv~~sld~yK~EL~~lLyPvFvh~yL~Lv~~~~~~A~~F~~~f~~~~~ 61 (134)
T d2j49a1 3 NYIRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKNPVYARRFFDRFSPDFK 61 (134)
T ss_dssp THHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHGGGGH
T ss_pred HHHHHHHHHHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhhHHHH
Confidence 477788888888888877766 6779999999883
No 9
>d2hgsa1 c.30.1.4 (A:202-303) Eukaryotic glutathione synthetase, substrate-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.49 E-value=8.1 Score=26.12 Aligned_cols=18 Identities=28% Similarity=0.630 Sum_probs=13.4
Q ss_pred eEEEee-ccCCCcCCCCCC
Q 038968 123 TVFFGS-TSPLHIKSLDWE 140 (206)
Q Consensus 123 ~vffRt-~SP~Hf~~g~Wn 140 (206)
+|.||+ |+|+||...+|+
T Consensus 62 vvYfRaGY~P~dY~~~~W~ 80 (102)
T d2hgsa1 62 VVYFRDGYMPRQYSLQNWE 80 (102)
T ss_dssp EEEESSCSSGGGCCHHHHH
T ss_pred EEEEecCcCcccCChhhHH
Confidence 578885 899999655664
No 10
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.91 E-value=33 Score=23.85 Aligned_cols=33 Identities=12% Similarity=0.128 Sum_probs=21.1
Q ss_pred HHHHHHHHHhhCCCCceeEEEeeccCCCcCCCCCC
Q 038968 106 LKTWSKWVEQNVDPNRTTVFFGSTSPLHIKSLDWE 140 (206)
Q Consensus 106 l~t~~~wi~~~~~~~~~~vffRt~SP~Hf~~g~Wn 140 (206)
+..|++.|...+..+. ...+.+.|.||.+|-|.
T Consensus 120 ~~~WI~aL~~~i~~~~--~~~~~~h~~~~~~~~w~ 152 (169)
T d1btka_ 120 RKRWIHQLKNVIRYNS--DLVQKYHPCFWIDGQYL 152 (169)
T ss_dssp HHHHHHHHHHHHTTCS--CCCSEECSSCEETTEET
T ss_pred HHHHHHHHHHHHHhCc--ccccccCcccccCCEEc
Confidence 4455555555454432 23567799999999995
Done!