BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038969
(678 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 9/122 (7%)
Query: 529 DVAKITNNFEK--VIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI-- 584
D+ + TNNF+ +IG G FG VY G L +G +VA+K + S QG ++F+ E++ +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 585 VHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN----TLTWEARLRIATEAAQG 640
H +L +L+G+CDE M LIY++M GNL+ HL G++ +++WE RL I AA+G
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 641 SH 642
H
Sbjct: 152 LH 153
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 9/122 (7%)
Query: 529 DVAKITNNFEK--VIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI-- 584
D+ + TNNF+ +IG G FG VY G L +G +VA+K + S QG ++F+ E++ +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 585 VHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN----TLTWEARLRIATEAAQG 640
H +L +L+G+CDE M LIY++M GNL+ HL G++ +++WE RL I AA+G
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 641 SH 642
H
Sbjct: 152 LH 153
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 523 RKFSYSDVAKITNNF--EKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK-QFQA 579
++FS ++ ++NF + ++G+GGFG VY G L +GT VAVK L QG + QFQ
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERXQGGELQFQT 84
Query: 580 EVQYI--VHHKNLTTLVGYCDEDTNMGLIYEFMAKGN----LEEHLSGANTLTWEARLRI 633
EV+ I H+NL L G+C T L+Y +MA G+ L E L W R RI
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 634 ATEAAQGSHSAFDQGCCPHI 653
A +A+G D C P I
Sbjct: 145 ALGSARGLAYLHDH-CDPKI 163
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 523 RKFSYSDVAKITNNF--EKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK-QFQA 579
++FS ++ ++NF + ++G+GGFG VY G L +G VAVK L QG + QFQ
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLA-DGXLVAVKRLKEERTQGGELQFQT 76
Query: 580 EVQYI--VHHKNLTTLVGYCDEDTNMGLIYEFMAKGN----LEEHLSGANTLTWEARLRI 633
EV+ I H+NL L G+C T L+Y +MA G+ L E L W R RI
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 634 ATEAAQGSHSAFDQGCCPHI 653
A +A+G D C P I
Sbjct: 137 ALGSARGLAYLHDH-CDPKI 155
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 525 FSYSDVAKITNNFEK--------VIGKGGFGTVYHGYLEFNGTQVAVKMLSA----SSVQ 572
FS+ ++ +TNNF++ +G+GGFG VY GY+ N T VAVK L+A ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 72
Query: 573 GYKQFQAEVQYIV--HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS---GANTLTW 627
+QF E++ + H+NL L+G+ + ++ L+Y +M G+L + LS G L+W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 628 EARLRIATEAAQG 640
R +IA AA G
Sbjct: 133 HMRCKIAQGAANG 145
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 525 FSYSDVAKITNNFEK--------VIGKGGFGTVYHGYLEFNGTQVAVKMLSA----SSVQ 572
FS+ ++ +TNNF++ +G+GGFG VY GY+ N T VAVK L+A ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 72
Query: 573 GYKQFQAEVQYIV--HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS---GANTLTW 627
+QF E++ + H+NL L+G+ + ++ L+Y +M G+L + LS G L+W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 628 EARLRIATEAAQG 640
R +IA AA G
Sbjct: 133 HMRCKIAQGAANG 145
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 525 FSYSDVAKITNNFEK--------VIGKGGFGTVYHGYLEFNGTQVAVKMLSA----SSVQ 572
FS+ ++ +TNNF++ +G+GGFG VY GY+ N T VAVK L+A ++ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 66
Query: 573 GYKQFQAEVQYIV--HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS---GANTLTW 627
+QF E++ + H+NL L+G+ + ++ L+Y +M G+L + LS G L+W
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 628 EARLRIATEAAQG 640
R +IA AA G
Sbjct: 127 HMRCKIAQGAANG 139
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 19/133 (14%)
Query: 525 FSYSDVAKITNNFEK--------VIGKGGFGTVYHGYLEFNGTQVAVKMLSA----SSVQ 572
FS+ ++ +TNNF++ G+GGFG VY GY+ N T VAVK L+A ++ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 63
Query: 573 GYKQFQAEVQYIV--HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS---GANTLTW 627
+QF E++ H+NL L+G+ + ++ L+Y + G+L + LS G L+W
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 628 EARLRIATEAAQG 640
R +IA AA G
Sbjct: 124 HXRCKIAQGAANG 136
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLS-------ASSVQGYKQFQAEV 581
D A++T E++IG GGFG VY + + G +VAVK + +++ +Q +A++
Sbjct: 5 DFAELT--LEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQ-EAKL 59
Query: 582 QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQGS 641
++ H N+ L G C ++ N+ L+ EF G L LSG + + + A + A+G
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGM 118
Query: 642 HSAFDQGCCPHICESSSSSN 661
+ D+ P I SSN
Sbjct: 119 NYLHDEAIVPIIHRDLKSSN 138
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 524 KFSYSDVAKITNN---FEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQG------- 573
+F S + + +N +EK IGKGGFG V+ G L + + VA+K L +G
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 574 YKQFQAEVQYI--VHHKNLTTLVGYCDEDTNMGLIYEFMAKGNL-EEHLSGANTLTWEAR 630
+++FQ EV + ++H N+ L G M + EF+ G+L L A+ + W +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 631 LRIATEAAQG 640
LR+ + A G
Sbjct: 125 LRLMLDIALG 134
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 524 KFSYSDVAKITNN---FEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQG------- 573
+F S + + +N +EK IGKGGFG V+ G L + + VA+K L +G
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 574 YKQFQAEVQYI--VHHKNLTTLVGYCDEDTNMGLIYEFMAKGNL-EEHLSGANTLTWEAR 630
+++FQ EV + ++H N+ L G M + EF+ G+L L A+ + W +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 631 LRIATEAAQG 640
LR+ + A G
Sbjct: 125 LRLMLDIALG 134
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 524 KFSYSDVAKITNN---FEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQG------- 573
+F S + + +N +EK IGKGGFG V+ G L + + VA+K L +G
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 574 YKQFQAEVQYI--VHHKNLTTLVGYCDEDTNMGLIYEFMAKGNL-EEHLSGANTLTWEAR 630
+++FQ EV + ++H N+ L G M + EF+ G+L L A+ + W +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 631 LRIATEAAQG 640
LR+ + A G
Sbjct: 125 LRLMLDIALG 134
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK--QFQAEVQYI--VHHKNLT 591
N ++ IG G FGTV+ E++G+ VAVK+L + +F EV + + H N+
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEE--HLSGAN-TLTWEARLRIATEAAQG 640
+G + N+ ++ E++++G+L H SGA L RL +A + A+G
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK--QFQAEVQYI--VHHKNLT 591
N ++ IG G FGTV+ E++G+ VAVK+L + +F EV + + H N+
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEE--HLSGAN-TLTWEARLRIATEAAQG 640
+G + N+ ++ E++++G+L H SGA L RL +A + A+G
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 535 NNFEKV--IGKGGFGTVYH----GYLEFNG-TQVAVKML---SASSVQGYKQFQAEVQYI 584
NN E V IG+G FG V+ G L + T VAVKML +++ +Q Q +A +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 585 VHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS--GANTLTWEARLRIATEAAQGSH 642
+ N+ L+G C M L++E+MA G+L E L +T+ + ++T A S
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 643 SAFDQGCCPHIC 654
C +C
Sbjct: 167 GPPPLSCAEQLC 178
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYIVHHKNLTTL 593
F + IG G FG V+ GY N +VA+K + A S + + + +AEV + H L L
Sbjct: 8 TFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQL 65
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHLSGANTL-TWEARLRIATEAAQGSHSAFDQGCCPH 652
G C E + L++EFM G L ++L L E L + + +G + ++ C H
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG-MAYLEEACVIH 124
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYIVHHKNLTTL 593
F + IG G FG V+ GY N +VA+K + A S + + + +AEV + H L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQL 67
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHLSGANTL-TWEARLRIATEAAQGSHSAFDQGCCPH 652
G C E + L++EFM G L ++L L E L + + +G + ++ C H
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG-MAYLEEACVIH 126
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYIVHHKNLTTL 593
F + IG G FG V+ GY N +VA+K + A S + + + +AEV + H L L
Sbjct: 13 TFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQL 70
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHLSGANTL-TWEARLRIATEAAQGSHSAFDQGCCPH 652
G C E + L++EFM G L ++L L E L + + +G + ++ C H
Sbjct: 71 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG-MAYLEEACVIH 129
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQ-AEVQYIVHHKNLTTLV 594
F + IG G FG V+ GY N +VA+K + S+ + AEV + H L L
Sbjct: 30 TFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 595 GYCDEDTNMGLIYEFMAKGNLEEHLSGANTL-TWEARLRIATEAAQGSHSAFDQGCCPH 652
G C E + L++EFM G L ++L L E L + + +G + ++ C H
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG-MAYLEEACVIH 146
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYIVHHKNLTTL 593
F + IG G FG V+ GY N +VA+K + A S + + + +AEV + H L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQL 67
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHLSGANTL-TWEARLRIATEAAQG 640
G C E + L++EFM G L ++L L E L + + +G
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 115
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYIVHHKNLTTL 593
F + IG G FG V+ GY N +VA+K + A S + + + +AEV + H L L
Sbjct: 11 TFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQL 68
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHLSGANTL-TWEARLRIATEAAQGSHSAFDQGCCPH 652
G C E + L+ EFM G L ++L L E L + + +G + ++ C H
Sbjct: 69 YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG-MAYLEEACVIH 127
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQV--AVK-MLSASSVQGYKQFQAEVQYIV---HHKNL 590
F+ VIG+G FG V ++ +G ++ A+K M +S ++ F E++ + HH N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAA 638
L+G C+ + L E+ GNL + L + L + IA A
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 126
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G FG VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECN 102
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQV--AVK-MLSASSVQGYKQFQAEVQYIV---HHKNL 590
F+ VIG+G FG V ++ +G ++ A+K M +S ++ F E++ + HH N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAA 638
L+G C+ + L E+ GNL + L + L + IA A
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 133
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQV--AVK-MLSASSVQGYKQFQAEVQYIV---HHKNL 590
F+ VIG+G FG V ++ +G ++ A+K M +S ++ F E++ + HH N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAA 638
L+G C+ + L E+ GNL + L + L + IA A
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 136
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECN 109
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECN 105
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECN 102
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECN 104
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN 109
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECN 104
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECN 105
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN 109
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECN 108
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN 104
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN 104
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN 106
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN 109
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN 104
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECN 102
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN 109
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN 104
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECN 311
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN 106
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECN 117
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN 106
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECN 350
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ +I EFM GNL ++L N
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECN 308
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 16/148 (10%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK-QFQAEVQYIVH--HKNLTTLVGYC 597
IG+G FG V+ G L + T VAVK + K +F E + + H N+ L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 598 DEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIAT------EAAQGSHSAFDQGCCP 651
+ + ++ E + G+ L T ARLR+ T +AA G + CC
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR-----TEGARLRVKTLLQMVGDAAAGM-EYLESKCCI 235
Query: 652 HI-CESSSSSNPHKNIVKLITFSIIKNN 678
H + + KN++K+ F + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREE 263
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 16/148 (10%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK-QFQAEVQYIVH--HKNLTTLVGYC 597
IG+G FG V+ G L + T VAVK + K +F E + + H N+ L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 598 DEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIAT------EAAQGSHSAFDQGCCP 651
+ + ++ E + G+ L T ARLR+ T +AA G + CC
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR-----TEGARLRVKTLLQMVGDAAAGM-EYLESKCCI 235
Query: 652 HI-CESSSSSNPHKNIVKLITFSIIKNN 678
H + + KN++K+ F + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREE 263
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNLTTLVGY-C 597
+ IGKG FG V G ++ G +VAVK + + +A V + H NL L+G
Sbjct: 12 QTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 598 DEDTNMGLIYEFMAKGNLEEHL--SGANTLTWEARLRIATEAAQG 640
+E + ++ E+MAKG+L ++L G + L + L+ + + +
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSAS--SVQGYKQFQAEVQYIVHHKNLTTLVGY 596
K +G G FG V+ GY N T+VAVK L SVQ + + +A + + H L L
Sbjct: 18 KKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLE-EANLMKTLQHDKLVRLYAV 75
Query: 597 CDEDTNMGLIYEFMAKGNLEEHL 619
++ + +I EFMAKG+L + L
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFL 98
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNLTTLVGY-C 597
+ IGKG FG V G ++ G +VAVK + + +A V + H NL L+G
Sbjct: 199 QTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 598 DEDTNMGLIYEFMAKGNLEEHL--SGANTLTWEARLRIATEAAQG 640
+E + ++ E+MAKG+L ++L G + L + L+ + + +
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 537 FEKVIGKGGFGTV----YHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI--VHHKNL 590
F + +GKG FG+V Y + G VAVK L S+ + + F+ E++ + + H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 591 TTLVGYC--DEDTNMGLIYEFMAKGNLEEHLS 620
G C N+ LI EF+ G+L E+L
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQ 108
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNLTTLVGY-C 597
+ IGKG FG V G ++ G +VAVK + + +A V + H NL L+G
Sbjct: 18 QTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 598 DEDTNMGLIYEFMAKGNLEEHL--SGANTLTWEARLRIATEAAQG 640
+E + ++ E+MAKG+L ++L G + L + L+ + + +
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 120
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 541 IGKGGFGTV----YHGYLEFNGTQVAVKMLSASSVQGY-KQFQAEVQYI--VHHKNLTTL 593
+G+G FG V Y + G QVAVK L S + + E++ + ++H+N+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 594 VGYCDEDTNMG--LIYEFMAKGNLEEHL-SGANTLTWEARLRIATEAAQG 640
G C ED G LI EF+ G+L+E+L N + + +L+ A + +G
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKG 138
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNLTTLVGY-C 597
+ IGKG FG V G ++ G +VAVK + + +A V + H NL L+G
Sbjct: 27 QTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 598 DEDTNMGLIYEFMAKGNLEEHL--SGANTLTWEARLRIATEAAQG 640
+E + ++ E+MAKG+L ++L G + L + L+ + + +
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 541 IGKGGFGTV----YHGYLEFNGTQVAVKMLSASSVQGY-KQFQAEVQYI--VHHKNLTTL 593
+G+G FG V Y + G QVAVK L S + + E++ + ++H+N+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 594 VGYCDEDTNMG--LIYEFMAKGNLEEHL-SGANTLTWEARLRIATEAAQG 640
G C ED G LI EF+ G+L+E+L N + + +L+ A + +G
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKG 126
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ TL+G C +D + +I E+ +KGNL E+L +T++ +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 539 KVIGKGGFGTVYHGYLEFNG---------TQVAVKMLSASSVQ-GYKQFQAEVQY---IV 585
K +G+G FG V E G T+VAVKML + + + +E++ I
Sbjct: 34 KPLGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
HKN+ L+G C +D + +I E+ +KGNL E+L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 539 KVIGKGGFGTVYHGYLEFNG---------TQVAVKMLSASSVQ-GYKQFQAEVQY---IV 585
K +G+G FG V E G T+VAVKML + + + +E++ I
Sbjct: 19 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
HKN+ L+G C +D + +I E+ +KGNL E+L
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 112
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 539 KVIGKGGFGTVYHGYLEFNG---------TQVAVKMLSASSVQ-GYKQFQAEVQY---IV 585
K +G+G FG V E G T+VAVKML + + + +E++ I
Sbjct: 34 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
HKN+ L+G C +D + +I E+ +KGNL E+L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 539 KVIGKGGFGTVYHGYLEFNG---------TQVAVKMLSASSVQ-GYKQFQAEVQY---IV 585
K +G+G FG V E G T+VAVKML + + + +E++ I
Sbjct: 23 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
HKN+ L+G C +D + +I E+ +KGNL E+L
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 116
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 539 KVIGKGGFGTVYHGYLEFNG---------TQVAVKMLSASSVQ-GYKQFQAEVQY---IV 585
K +G+G FG V E G T+VAVKML + + + +E++ I
Sbjct: 27 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
HKN+ L+G C +D + +I E+ +KGNL E+L
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 120
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 539 KVIGKGGFGTVYHGYLEFNG---------TQVAVKMLSASSVQ-GYKQFQAEVQY---IV 585
K +G+G FG V E G T+VAVKML + + + +E++ I
Sbjct: 26 KPLGEGAFGQVV--LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
HKN+ L+G C +D + +I E+ +KGNL E+L
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 119
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 539 KVIGKGGFGTVYHGYLEFNG---------TQVAVKMLSASSVQ-GYKQFQAEVQY---IV 585
K +G+G FG V E G T+VAVKML + + + +E++ I
Sbjct: 34 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
HKN+ L+G C +D + +I E+ +KGNL E+L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 539 KVIGKGGFGTVYHGYLEFNG---------TQVAVKMLSASSVQ-GYKQFQAEVQY---IV 585
K +G+G FG V E G T+VAVKML + + + +E++ I
Sbjct: 34 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
HKN+ L+G C +D + +I E+ +KGNL E+L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSAS--SVQGYKQFQAEVQYIVHHKNLTTLVGY 596
K +G G FG V+ GY N T+VAVK L SVQ + + +A + + H L L
Sbjct: 19 KRLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLE-EANLMKTLQHDKLVRLYAV 76
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLS 620
+ + +I E+MAKG+L + L
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLK 100
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 541 IGKGGFGTVY----HGYL-EFNGTQVAVKMLSASSVQGYKQFQ--AEVQYIVHHKNLTTL 593
+G+G FG V+ H L E + VAVK L +S + FQ AE+ ++ H+++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHL 619
G C E + +++E+M G+L L
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFL 111
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 539 KVIGKGGFGTVYHGYLEFNG---------TQVAVKMLSASSVQ-GYKQFQAEVQY---IV 585
K +G+G FG V E G T+VAVKML + + + +E++ I
Sbjct: 75 KPLGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
HKN+ L+G C +D + +I E+ +KGNL E+L
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 168
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 541 IGKGGFGTVY----HGYL-EFNGTQVAVKMLSASSVQGYKQFQ--AEVQYIVHHKNLTTL 593
+G+G FG V+ H L E + VAVK L +S + FQ AE+ ++ H+++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHL 619
G C E + +++E+M G+L L
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFL 105
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 541 IGKGGFGTVY----HGYL-EFNGTQVAVKMLSASSVQGYKQFQ--AEVQYIVHHKNLTTL 593
+G+G FG V+ H L E + VAVK L +S + FQ AE+ ++ H+++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHL 619
G C E + +++E+M G+L L
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFL 134
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I E+ +KGNL E+L +T++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I E+ +KGNL E+L +T++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I E+ +KGNL E+L +T++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I E+ +KGNL E+L +T++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 405 SLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAG 447
+L LDL NN + G++P+ L++L FL LN++ NNL G +P G
Sbjct: 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 30/160 (18%)
Query: 333 LTSQQDVDAIMSIKKKYG--------------VKKNWQGDPCAPKVYLWQGLNCSYDGNE 378
L + QD A++ IKK G + W G C ++ N G
Sbjct: 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 61
Query: 379 LPRXXXXXXXXXXXXXXXXTYI--------------FSLTSLQALDLSNNSLTGSVPEFL 424
LP+ YI LT L L +++ +++G++P+FL
Sbjct: 62 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL 121
Query: 425 SELHFLRVLNLTGNNLEGSVPAGLLERAKNGLLSLSVDGN 464
S++ L L+ + N L G++P + + L+ ++ DGN
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSI--SSLPNLVGITFDGN 159
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 399 YIFSLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVP 445
++ + +L LD S N+L+G++P +S L L + GN + G++P
Sbjct: 120 FLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKNL 590
E+VIG G FG V G+L+ G + VA+K L + + ++ +A + H N+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L G + T + +I EFM G+L+ L
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFL 99
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I E+ +KGNL E+L +T++ +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I E+ +KGNL E+L +T++ +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 207 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 252
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKNL 590
E+VIG G FG V G+L+ G + VA+K L + + ++ +A + H N+
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L G + T + +I EFM G+L+ L
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFL 125
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 10/134 (7%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASS-----VQG 573
E+ RKF+ D + + +GKG FG VY + N +A+K+L S V+
Sbjct: 5 EMPKRKFTIDDF-----DIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 59
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRI 633
+ + E+Q + H N+ + Y + + L+ EF +G L + L +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 119
Query: 634 ATEAAQGSHSAFDQ 647
E A H ++
Sbjct: 120 MEELADALHYCHER 133
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 10/134 (7%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASS-----VQG 573
E+ RKF+ D + + +GKG FG VY + N +A+K+L S V+
Sbjct: 5 EMPKRKFTIDDF-----DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 59
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRI 633
+ + E+Q + H N+ + Y + + L+ EF +G L + L +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 119
Query: 634 ATEAAQGSHSAFDQ 647
E A H ++
Sbjct: 120 MEELADALHYCHER 133
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 10/134 (7%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASS-----VQG 573
E+ RKF+ D + + +GKG FG VY + N +A+K+L S V+
Sbjct: 6 EMPKRKFTIDDF-----DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 60
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRI 633
+ + E+Q + H N+ + Y + + L+ EF +G L + L +
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 120
Query: 634 ATEAAQGSHSAFDQ 647
E A H ++
Sbjct: 121 MEELADALHYCHER 134
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I E+ +KGNL E+L +T++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++++ F + ++
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARD 206
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 32/173 (18%)
Query: 537 FEKVIGKGGFGTVYHGY---LEFNGT--QVAVKMLSASSVQGYKQ-FQAEVQYIVH---H 587
F KV+G G FG V + + G QVAVKML + ++ +E++ + H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGA-----------------------NT 624
+N+ L+G C + LI+E+ G+L +L N
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 625 LTWEARLRIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
LT+E L A + A+G + C + + H +VK+ F + ++
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I E+ +KGNL E+L +T++ +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 153 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 198
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I E+ +KGNL E+L +T++ +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 150 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 195
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASS-----VQGYKQFQAEVQYIVHH 587
++FE + +GKG FG VY + + VA+K+L S V+ + + E+Q +HH
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
N+ L Y + + LI E+ +G L + L + T + I E A
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADA 135
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I E+ +KGNL E+L +T++ +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 148 SCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARD 193
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTLVGYCD 598
+G G +G VY G + VAVK L +++ ++F +A V + H NL L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGAN 623
+ ++ E+M GNL ++L N
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECN 123
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I + +KGNL E+L +T++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQG-YKQFQAEVQYIVHHKNLTTLVG 595
++ IGKG FG V+ G ++ G +VAVK+ S+ + +++ + ++ H+N+ +
Sbjct: 46 LQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA 103
Query: 596 YCDED----TNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
++D T + L+ ++ G+L ++L+ T+T E +++A A G
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASG 151
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 537 FEKVIGKGGFGTV-----YHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI--VHHKN 589
++ +G+G FG V Y+ E + VAVK L +S K F E + + + H++
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG-------------ANTLTWEARLRIATE 636
+ G C E + +++E+M G+L + L LT L IA +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 637 AAQG 640
A G
Sbjct: 137 IAAG 140
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQG-YKQFQAEVQYIVHHKNLTTLVG 595
++ IGKG FG V+ G ++ G +VAVK+ S+ + +++ + ++ H+N+ +
Sbjct: 33 LQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA 90
Query: 596 YCDED----TNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
++D T + L+ ++ G+L ++L+ T+T E +++A A G
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASG 138
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 27/166 (16%)
Query: 539 KVIGKGGFGTVYHGYL-------EFNGTQVAVKMLSASSVQ-GYKQFQAEVQY---IVHH 587
K +G+G FG V VAVKML + + +E++ I H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG----------------ANTLTWEARL 631
KN+ L+G C +D + +I + +KGNL E+L +T++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 632 RIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G Q C + + N++K+ F + ++
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQG-YKQFQAEVQYIVHHKNLTTLVG 595
++ IGKG FG V+ G ++ G +VAVK+ S+ + +++ + ++ H+N+ +
Sbjct: 8 LQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA 65
Query: 596 YCDED----TNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
++D T + L+ ++ G+L ++L+ T+T E +++A A G
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASG 113
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQG-YKQFQAEVQYIVHHKNLTTLVG 595
++ IGKG FG V+ G ++ G +VAVK+ S+ + +++ + ++ H+N+ +
Sbjct: 7 LQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA 64
Query: 596 YCDED----TNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
++D T + L+ ++ G+L ++L+ T+T E +++A A G
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASG 112
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSA--SSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVK+L + + ++ F+ EV + H N+ +GY
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL-RIATEAAQG 640
+D N+ ++ ++ +L +HL T +L IA + AQG
Sbjct: 101 MTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQG 144
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQFQ-AEVQYIVH 586
++ + + E +G+G FG V+ G +NGT +VA+K L ++ Q A+V +
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR 61
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 62 HEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKG 95
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQY--IVHHKNLTTLVGYCD 598
+G G FG V+ G A K + + + E+Q ++ H L L +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 599 EDTNMGLIYEFMAKGNLEEHLS 620
+D M +IYEFM+ G L E ++
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVA 140
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQY--IVHHKNLTTL 593
+ + +G G FG V+ G A K + + + E+Q ++ H L L
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 219
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHLS 620
++D M +IYEFM+ G L E ++
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGELFEKVA 246
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 25/167 (14%)
Query: 536 NFEKVIGKGGFGTVYHGY---LEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH--- 586
N K +G+G FG V ++ T VAVKML + ++ +E++ ++H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 587 HKNLTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG---------------ANTLTWEAR 630
H N+ L+G C + + +I EF GNL +L + LT E
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 631 LRIATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + + A+G + C + + KN+VK+ F + ++
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 20 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANT-LTWEARLRIATEAAQG 640
+ + ++ ++ +L HL + T + + IA + A+G
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 120
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQG-YKQFQAEVQYIVHHKNLTTLVG 595
++ IGKG FG V+ G ++ G +VAVK+ S+ + +++ + ++ H+N+ +
Sbjct: 13 LQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA 70
Query: 596 YCDED----TNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
++D T + L+ ++ G+L ++L+ T+T E +++A A G
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASG 118
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQG-YKQFQAEVQYIVHHKNLTTLVG 595
++ IGKG FG V+ G ++ G +VAVK+ S+ + +++ + ++ H+N+ +
Sbjct: 10 LQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA 67
Query: 596 YCDED----TNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
++D T + L+ ++ G+L ++L+ T+T E +++A A G
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASG 115
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTT 592
F K +G G FG V +G ++ G VA+KM+ S+ +F +A+V + H+ L
Sbjct: 12 TFLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQ 68
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQGSHSAFDQGCCPH 652
L G C + + +I E+MA G L +L E R R T+ C
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLR-------EMRHRFQTQQL--------LEMCKD 113
Query: 653 ICES 656
+CE+
Sbjct: 114 VCEA 117
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTT 592
F K +G G FG V +G ++ G VA+KM+ S+ +F +A+V + H+ L
Sbjct: 7 TFLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQ 63
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQGSHSAFDQGCCPH 652
L G C + + +I E+MA G L +L E R R T+ C
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYLR-------EMRHRFQTQQL--------LEMCKD 108
Query: 653 ICES 656
+CE+
Sbjct: 109 VCEA 112
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQF-QAEVQYIVHHKNLTT 592
K IGKG F V G +VAVK+ L++SS+Q K F + + +++H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ--KLFREVRIMKVLNHPNIVK 77
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWE---ARLRIATEAAQGSHSAF 645
L + + + L+ E+ + G + ++L + + A+ R A Q H F
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTT 592
F K +G G FG V +G ++ G VA+KM+ S+ +F +A+V + H+ L
Sbjct: 11 TFLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQ 67
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQGSHSAFDQGCCPH 652
L G C + + +I E+MA G L +L E R R T+ C
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYLR-------EMRHRFQTQQL--------LEMCKD 112
Query: 653 ICES 656
+CE+
Sbjct: 113 VCEA 116
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 538 EKVIGKGGFGTVYHGYLEFNGTQ----VAVKMLSASSVQGYKQFQ-------AEVQYIVH 586
+KVIG G FG VY G L+ + + VA+K L A GY + Q A +
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA----GYTEKQRVDFLGEAGIMGQFS 104
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
H N+ L G + M +I E+M G L++ L
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFL 137
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 32 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANT-LTWEARLRIATEAAQG 640
+ + ++ ++ +L HL + T + + IA + A+G
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQF-QAEVQYIVHHKNLTT 592
K IGKG F V G +VAVK+ L++SS+Q K F + + +++H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ--KLFREVRIMKVLNHPNIVK 77
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWE---ARLRIATEAAQGSHSAF 645
L + + + L+ E+ + G + ++L + + A+ R A Q H F
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 539 KVIGKGGFGTVYHGYL-EFNGT--QVAVKM--LSASSVQGYKQFQAEVQYI--VHHKNLT 591
K++G+G FG+V G L + +GT +VAVK L SS + ++F +E + H N+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 592 TLVGYCDEDTNMGL-----IYEFMAKGNLEEHL------SGANTLTWEARLRIATEAAQG 640
L+G C E ++ G+ I FM G+L +L +G + + L+ + A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQF-QAEVQYIVHHKNLTT 592
K IGKG F V G +VAVK+ L++SS+Q K F + + +++H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ--KLFREVRIMKVLNHPNIVK 77
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWE---ARLRIATEAAQGSHSAF 645
L + + + L+ E+ + G + ++L + + A+ R A Q H F
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 21/123 (17%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTTL 593
F K +G G FG V +G ++ G VA+KM+ S+ +F +A+V + H+ L L
Sbjct: 13 FLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQL 69
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQGSHSAFDQGCCPHI 653
G C + + +I E+MA G L +L E R R T+ C +
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLR-------EMRHRFQTQQL--------LEMCKDV 114
Query: 654 CES 656
CE+
Sbjct: 115 CEA 117
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTT 592
F K +G G FG V +G ++ G VA+KM+ S+ +F +A+V + H+ L
Sbjct: 27 TFLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQ 83
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQGSHSAFDQGCCPH 652
L G C + + +I E+MA G L +L E R R T+ C
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLR-------EMRHRFQTQQL--------LEMCKD 128
Query: 653 ICES 656
+CE+
Sbjct: 129 VCEA 132
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 517 SWELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSV 571
+ E K R+++ D + +GKG FG VY + + +A+K+L + V
Sbjct: 2 AMESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV 56
Query: 572 QGYKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + + E+Q + H N+ L GY + T + LI E+ +G + + L
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ 105
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 517 SWELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSV 571
+ E K R+++ D + +GKG FG VY + + +A+K+L + V
Sbjct: 2 AMESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV 56
Query: 572 QGYKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + + E+Q + H N+ L GY + T + LI E+ +G + + L
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ 105
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTT 592
F K +G G FG V +G ++ G VA+KM+ S+ +F +A+V + H+ L
Sbjct: 27 TFLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQ 83
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQGSHSAFDQGCCPH 652
L G C + + +I E+MA G L +L E R R T+ C
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLR-------EMRHRFQTQQL--------LEMCKD 128
Query: 653 ICES 656
+CE+
Sbjct: 129 VCEA 132
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSV--QGYKQFQAEVQYIV 585
++ + + E +G+G FG V+ G +NGT +VA+K L ++ + + Q +A+V +
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKL 63
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 64 RHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKG 98
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQFQ-AEVQYIVH 586
++ + + E +G+G FG V+ G +NGT +VA+K L ++ Q A+V +
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIR 71
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 72 HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKG 105
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSV--QGYKQFQAEVQYIV 585
++ + + E +G+G FG V+ G +NGT +VA+K L ++ + + Q +A+V +
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKL 59
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 60 RHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKG 94
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQF--QAEVQYIVHHKNLTT 592
F K +G G FG V +G ++ G VA+KM+ S+ +F +A+V + H+ L
Sbjct: 18 TFLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQ 74
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQGSHSAFDQGCCPH 652
L G C + + +I E+MA G L +L E R R T+ C
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYLR-------EMRHRFQTQQL--------LEMCKD 119
Query: 653 ICES 656
+CE+
Sbjct: 120 VCEA 123
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSV--QGYKQFQAEVQYIV 585
++ + + E +G+G FG V+ G +NGT +VA+K L ++ + + Q +A+V +
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKL 61
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 62 RHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKG 96
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 538 EKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI--VHHKNLTTLVG 595
E+V+G+G FG V ++ VA+K + + S + K F E++ + V+H N+ L G
Sbjct: 14 EEVVGRGAFGVVCKA--KWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 69
Query: 596 YCDEDTNMGLIYEFMAKGNLEEHLSGANTLTW 627
C + L+ E+ G+L L GA L +
Sbjct: 70 AC--LNPVCLVMEYAEGGSLYNVLHGAEPLPY 99
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 538 EKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI--VHHKNLTTLVG 595
E+V+G+G FG V ++ VA+K + + S + K F E++ + V+H N+ L G
Sbjct: 13 EEVVGRGAFGVVCKA--KWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 68
Query: 596 YCDEDTNMGLIYEFMAKGNLEEHLSGANTLTW 627
C + L+ E+ G+L L GA L +
Sbjct: 69 AC--LNPVCLVMEYAEGGSLYNVLHGAEPLPY 98
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSV--QGYKQFQAEVQYIV 585
++ + + E +G+G FG V+ G +NGT +VA+K L ++ + + Q +A+V +
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKL 70
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 71 RHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKG 105
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 32 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANT-LTWEARLRIATEAAQG 640
+ ++ ++ +L HL + T + + IA + A+G
Sbjct: 89 STA-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQFQ-AEVQYIVH 586
++ + + E +G+G FG V+ G +NGT +VA+K L ++ Q A+V +
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR 71
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 72 HEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKG 105
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSV--QGYKQFQAEVQYIV 585
++ + + E +G+G FG V+ G +NGT +VA+K L ++ + + Q +A+V +
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKL 236
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 237 RHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKG 271
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 532 KITNNFEKVIGKGGFGTVYHG-YLE--FNGTQVAVKMLS-ASSVQGYKQFQAE--VQYIV 585
++ + ++VIGKG FG VYHG Y++ N Q A+K LS + +Q + F E + +
Sbjct: 20 RVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL 79
Query: 586 HHKNLTTLVGYCDEDTNM-GLIYEFMAKGNL 615
+H N+ L+G + ++ +M G+L
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLLPYMCHGDL 110
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQF-QAEVQYIVHHKNLTT 592
K IGKG F V G +VAV++ L++SS+Q K F + + +++H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ--KLFREVRIMKVLNHPNIVK 77
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWE---ARLRIATEAAQGSHSAF 645
L + + + L+ E+ + G + ++L + + A+ R A Q H F
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQF-QAEVQYIVHHKNLTT 592
K IGKG F V G +VAV++ L++SS+Q K F + + +++H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ--KLFREVRIMKVLNHPNIVK 77
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWE---ARLRIATEAAQGSHSAF 645
L + + + L+ E+ + G + ++L + + A+ R A Q H F
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 403 LTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVP 445
L L LDLS+N L G +P+ +S L L ++L+ NNL G +P
Sbjct: 679 LRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 404 TSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGL 448
T+L + LSNN LTG +P+++ L L +L L+ N+ G++PA L
Sbjct: 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 400 IFSLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGL 448
I S+ L L+L +N ++GS+P+ + +L L +L+L+ N L+G +P +
Sbjct: 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 700
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 403 LTSLQALDLSNNSLTGSVPEFLS-ELHFLRVLNLTGNNLEGSVP 445
L SLQ L L+ N TG +P+FLS L L+L+GN+ G+VP
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 399 YIFSLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGLLER------- 451
+I L +L L LSNNS +G++P L + L L+L N G++PA + ++
Sbjct: 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
Query: 452 --AKNGLLSLSVDGNPKLCHTA 471
A + + DG K CH A
Sbjct: 569 FIAGKRYVYIKNDGMKKECHGA 590
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 400 IFSLTSLQALDLSNNSLTGSVPEFLSELHF-LRVLNLTGNNLEGSVPAGLLERAKNGLLS 458
+ + L+ LDLS N +G +PE L+ L L L+L+ NN G + L + KN L
Sbjct: 339 LLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398
Query: 459 LSVDGN 464
L + N
Sbjct: 399 LYLQNN 404
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 405 SLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVP 445
S+ LD+S N L+G +P+ + + +L +LNL N++ GS+P
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 405 SLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGLLERAK 453
+LQ L L NN TG +P LS L L+L+ N L G++P+ L +K
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 443
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 404 TSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGLL 449
+ L +L LS N L+G++P L L LR L L N LEG +P L+
Sbjct: 418 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 399 YIFSLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVP 445
++ ++LQ LD+S N L+G +S L++LN++ N G +P
Sbjct: 218 FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 264
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 402 SLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGL 448
SL+ L+ L L N L G +P+ L + L L L N+L G +P+GL
Sbjct: 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQF-QAEVQYIVHHKNLTT 592
K IGKG F V G +VAVK+ L++SS+Q K F + + +++H N+
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ--KLFREVRIMKVLNHPNIVK 70
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWE---ARLRIATEAAQGSHSAF 645
L + + + L+ E+ + G + ++L + + A+ R A Q H F
Sbjct: 71 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 21 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL-RIATEAAQG 640
+ + ++ ++ +L HL T +L IA + AQG
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 121
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQFQ-AEVQYIVH 586
++ + + E +G+G FG V+ G +NGT +VA+K L ++ Q A+V +
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR 71
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 72 HEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKG 105
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSV--QGYKQFQAEVQYIV 585
++ + + E +G+G FG V+ G +NGT +VA+K L ++ + + Q +A+V +
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKL 236
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 237 RHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKG 271
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 403 LTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVP 445
L L LDLS+N L G +P+ +S L L ++L+ NNL G +P
Sbjct: 676 LRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 404 TSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGL 448
T+L + LSNN LTG +P+++ L L +L L+ N+ G++PA L
Sbjct: 487 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 400 IFSLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGL 448
I S+ L L+L +N ++GS+P+ + +L L +L+L+ N L+G +P +
Sbjct: 649 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 697
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 403 LTSLQALDLSNNSLTGSVPEFLS-ELHFLRVLNLTGNNLEGSVP 445
L SLQ L L+ N TG +P+FLS L L+L+GN+ G+VP
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 399 YIFSLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGLLER------- 451
+I L +L L LSNNS +G++P L + L L+L N G++PA + ++
Sbjct: 506 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 565
Query: 452 --AKNGLLSLSVDGNPKLCHTA 471
A + + DG K CH A
Sbjct: 566 FIAGKRYVYIKNDGMKKECHGA 587
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 400 IFSLTSLQALDLSNNSLTGSVPEFLSELHF-LRVLNLTGNNLEGSVPAGLLERAKNGLLS 458
+ + L+ LDLS N +G +PE L+ L L L+L+ NN G + L + KN L
Sbjct: 336 LLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 395
Query: 459 LSVDGN 464
L + N
Sbjct: 396 LYLQNN 401
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 405 SLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVP 445
S+ LD+S N L+G +P+ + + +L +LNL N++ GS+P
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 405 SLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGLLERAK 453
+LQ L L NN TG +P LS L L+L+ N L G++P+ L +K
Sbjct: 392 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 440
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 404 TSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGLL 449
+ L +L LS N L+G++P L L LR L L N LEG +P L+
Sbjct: 415 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 460
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 399 YIFSLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVP 445
++ ++LQ LD+S N L+G +S L++LN++ N G +P
Sbjct: 215 FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 261
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 402 SLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGL 448
SL+ L+ L L N L G +P+ L + L L L N+L G +P+GL
Sbjct: 437 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 483
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 18 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL-RIATEAAQG 640
+ + ++ ++ +L HL T +L IA + AQG
Sbjct: 75 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 118
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSV--QGYKQFQAEVQYIV 585
++ + + E +G+G FG V+ G +NGT +VA+K L ++ + + Q +A+V +
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKL 70
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 71 RHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKG 105
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQFQ-AEVQYIVH 586
++ + + E +G+G FG V+ G +NGT +VA+K L ++ Q A+V +
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR 71
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 72 HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKG 105
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 74
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 75 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 130
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL-RIATEAAQG 640
+ + ++ ++ +L HL T +L IA + AQG
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL-RIATEAAQG 640
+ + ++ ++ +L HL T +L IA + AQG
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 21 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL-RIATEAAQG 640
+ + ++ ++ +L HL T +L IA + AQG
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 121
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 36 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL-RIATEAAQG 640
+ + ++ ++ +L HL T +L IA + AQG
Sbjct: 93 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 136
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 43 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL-RIATEAAQG 640
+ + ++ ++ +L HL T +L IA + AQG
Sbjct: 100 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 143
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 71
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 72 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 71
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 72 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 70
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 71 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 126
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 66 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 537 FEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLSASSVQGYKQFQAEVQYI--VHHKN 589
++ +G+G FG V+ + VAVK L ++ K FQ E + + + H++
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ G C + + +++E+M G+L + L
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
EKVIG G FG V G L+ G + VA+K L A ++ +A + H N
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + +I E+M G+L+ L
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 67
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 68 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 123
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSAS-SVQGYKQFQAEVQYI--VHHKN 589
E+VIG G FG V G L+ G + VA+K L + + ++F +E + H N
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + ++ EFM G L+ L
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFL 106
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSAS-SVQGYKQFQAEVQYI--VHHKNL 590
E+VIG G FG V G L+ G + VA+K L + + ++F +E + H N+
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L G + ++ EFM G L+ L
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFL 108
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 539 KVIGKGGFGTVYHGY---LEFNGT--QVAVKML-SASSVQGYKQFQAEVQ---YIVHHKN 589
K +G+G FG V ++ + T VAVKML ++ YK E++ +I HH N
Sbjct: 33 KSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLN 92
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSGANTLTW---EARLRIATEAAQGSHSAF 645
+ L+G C + + +I E+ GNL +L L + +A L + + +
Sbjct: 93 VVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEK-MEPGL 151
Query: 646 DQGCCPHICESSSSSN 661
+QG P + +SS +
Sbjct: 152 EQGKKPRLDSVTSSES 167
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 66 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL-RIATEAAQG 640
+ + ++ ++ +L HL T +L IA + AQG
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 144
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 66 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 73
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 74 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 129
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL-RIATEAAQG 640
+ + ++ ++ +L HL T +L IA + AQG
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 144
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
EKVIG G FG V G L+ G + VA+K L A ++ +A + H N
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + +I E+M G+L+ L
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFL 100
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSASSVQGYKQFQ-AEVQYIVH 586
++ + + E +G+G FG V+ G +NGT +VA+K L ++ Q A+V +
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR 320
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 321 HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKG 354
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
EKVIG G FG V G L+ G + VA+K L A ++ +A + H N
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + +I E+M G+L+ L
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFL 106
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 66
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 67 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 122
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQF-QAEVQYIVHHKNL 590
+K IGKG F V G +VAVK+ L+ +S+Q K F + + I++H N+
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ--KLFREVRIMKILNHPNI 76
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWE---ARLRIATEAAQGSHSAF 645
L + + + L+ E+ + G + ++L + + A+ R A Q H +
Sbjct: 77 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY 134
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLR 139
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLR 138
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 75
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 76 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 131
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGT-QVAVKMLSAS--SVQGYKQFQAEVQYIV 585
++ + + E +G+G FG V+ G +NGT +VA+K L S + + Q +A+V +
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGNMSPEAFLQ-EAQVMKKL 237
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSG 621
H+ L L E+ + ++ E+M+KG+L + L G
Sbjct: 238 RHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKG 272
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 61
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 62 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 117
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLR 179
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNG-TQVAVKMLSASSVQGYKQFQAEVQYI--V 585
+V + T + +G G FG V+ GY +NG T+VAVK L S+ F AE + +
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGY--YNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 60
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGAN--TLTWEARLRIATEAAQG 640
H+ L L ++ + +I E+M G+L + L + LT L +A + A+G
Sbjct: 61 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 116
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLR 119
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 536 NFEKVIGKGGFGTVYHG---YLEFNGTQ--VAVKMLSASSVQG-YKQFQAEVQYIVH--- 586
N K +G+G FG V ++ T VAVKML + ++ +E++ ++H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 587 HKNLTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG------------ANTLTWEARLRI 633
H N+ L+G C + + +I EF GNL +L + LT E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 634 ATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + A+G + + + KN+VK+ F + ++
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARD 193
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 539 KVIGKGGFGTVYHGY---LEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG----------------ANTLTWEARLR 632
+ L+G C + + +I EF GNL +L + LT E +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 633 IATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + A+G + C + + KN+VK+ F + ++
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 539 KVIGKGGFGTVYHGY---LEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG----------------ANTLTWEARLR 632
+ L+G C + + +I EF GNL +L + LT E +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 633 IATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + A+G + C + + KN+VK+ F + ++
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 539 KVIGKGGFGTVYHGY---LEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG----------------ANTLTWEARLR 632
+ L+G C + + +I EF GNL +L + LT E +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 633 IATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + A+G + C + + KN+VK+ F + ++
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLR 112
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLR 120
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 539 KVIGKGGFGTVYHG---YLEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG----------------ANTLTWEARLR 632
+ L+G C + + +I EF GNL +L + LT E +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 633 IATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + A+G + C + + KN+VK+ F + ++
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 234
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLR 118
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQF-QAEVQYIVHHKNLTT 592
K IGKG F V G +VAVK+ L++SS+Q K F + + +++H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ--KLFREVRIXKVLNHPNIVK 77
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWE---ARLRIATEAAQGSHSAF 645
L + + + L+ E+ + G + ++L + A+ R A Q H F
Sbjct: 78 LFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLR 117
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKML--SASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
IG G FGTVY G +++G VAVKML +A + Q + F+ EV + H N+ +GY
Sbjct: 16 IGSGSFGTVYKG--KWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 597 CDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL-RIATEAAQG 640
+ ++ ++ +L HL T +L IA + AQG
Sbjct: 73 STA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLR 121
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 539 KVIGKGGFGTVYHG---YLEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG----------------ANTLTWEARLR 632
+ L+G C + + +I EF GNL +L + LT E +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 633 IATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + A+G + C + + KN+VK+ F + ++
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 199
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLR 120
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLR 119
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 539 KVIGKGGFGTVYHG---YLEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG----------------ANTLTWEARLR 632
+ L+G C + + +I EF GNL +L + LT E +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 633 IATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + A+G + C + + KN+VK+ F + ++
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLR 125
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLR 121
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLR 115
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLR 118
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLR 120
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 536 NFEKVIGKGGFGTVYHG-YLEFNGTQV--AVKMLS-ASSVQGYKQFQAE--VQYIVHHKN 589
+F +VIG+G FG VYHG L+ +G ++ AVK L+ + + QF E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 590 LTTLVGYCDEDTNMGL-IYEFMAKGNLE 616
+ +L+G C L + +M G+L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLR 120
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYL--EFNGTQ---VAVKMLSASSVQGYK 575
++++ +++ F + +G+ FG VY G+L G Q VA+K L + +
Sbjct: 14 QHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 576 Q---FQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ +A ++ + H N+ L+G +D + +I+ + + G+L E L
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQG 573
E K R+++ D + +GKG FG VY + + +A+K+L + V+
Sbjct: 25 ESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 79
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + E+Q + H N+ L GY + T + LI E+ G + L
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 126
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQG 573
E K R+++ D + +GKG FG VY + + +A+K+L + V+
Sbjct: 25 ESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 79
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + E+Q + H N+ L GY + T + LI E+ G + L
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 126
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 539 KVIGKGGFGTVYHG---YLEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG----------------ANTLTWEARLR 632
+ L+G C + + +I EF GNL +L + LT E +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 633 IATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + A+G + C + + KN+VK+ F + ++
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 539 KVIGKGGFGTVYHG---YLEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG----------------ANTLTWEARLR 632
+ L+G C + + +I EF GNL +L + LT E +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 633 IATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + A+G + C + + KN+VK+ F + ++
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 539 KVIGKGGFGTVYHG---YLEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG----------------ANTLTWEARLR 632
+ L+G C + + +I EF GNL +L + LT E +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 633 IATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + A+G + C + + KN+VK+ F + ++
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
E+VIG G FG V G L+ G + VA+K L + ++ +A + H N
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + ++ EFM G L+ L
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFL 135
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 536 NFEKVIGKGGFGTVYHG---YLEFNGTQ--VAVKMLSASSVQG-YKQFQAEVQYIVH--- 586
N K +G+G FG V ++ T VAVKML + ++ +E++ ++H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 587 HKNLTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG------------ANTLTWEARLRI 633
H N+ L+G C + + +I EF GNL +L + LT E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 634 ATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ + A+G + + + KN+VK+ F + ++
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARD 193
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKNL 590
E+VIG G FG V G L+ G + VA+K L + ++ +A + H N+
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 85
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L G + + ++ E+M G+L+ L
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFL 114
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQG 573
E K R+++ D + +GKG FG VY + + +A+K+L + V+
Sbjct: 2 ESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 56
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + E+Q + H N+ L GY + T + LI E+ G + L
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 103
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 536 NFEKVIGKGGFGTVYHGYL--EFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHH 587
F + +G+ FG VY G+L G Q VA+K L + ++ +A ++ + H
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH 71
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
N+ L+G +D + +I+ + + G+L E L
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQG 573
E K R+++ D + +GKG FG VY + + +A+K+L + V+
Sbjct: 2 ESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 56
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + E+Q + H N+ L GY + T + LI E+ G + L
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 103
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQG 573
E K R+++ D + +GKG FG VY + + +A+K+L + V+
Sbjct: 1 ESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 55
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + E+Q + H N+ L GY + T + LI E+ G + L
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 102
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 517 SWELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSV 571
+ E K R+++ D + +GKG FG VY + + +A+K+L + V
Sbjct: 2 AMESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV 56
Query: 572 QGYKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + + E+Q + H N+ L GY + T + LI E+ G + L
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 105
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 67/158 (42%), Gaps = 17/158 (10%)
Query: 527 YSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVH 586
+ D+ K+T+ +++G+G + V NG + AVK++ + + EV+ +
Sbjct: 10 FEDMYKLTS---ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 587 ---HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQGSHS 643
+KN+ L+ + ++DT L++E + G++ H+ R+ + A
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDF 126
Query: 644 AFDQGCCPH-------ICESSSSSNPHKNIVKLITFSI 674
+G +CES +P VK+ F +
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSP----VKICDFDL 160
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ 100
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQG 573
E K R+++ D + +GKG FG VY + + +A+K+L + V+
Sbjct: 1 ESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 55
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + E+Q + H N+ L GY + T + LI E+ G + L
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 102
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQG 573
E K R+++ D + +GKG FG VY + + +A+K+L + V+
Sbjct: 16 ESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 70
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + E+Q + H N+ L GY + T + LI E+ G + L
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 117
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQG 573
E K R+++ D + +GKG FG VY + + +A+K+L + V+
Sbjct: 4 ESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 58
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + E+Q + H N+ L GY + T + LI E+ G + L
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 105
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 101
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 101
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQG 573
E K R+++ D + +GKG FG VY + + +A+K+L + V+
Sbjct: 2 ESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 56
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + E+Q + H N+ L GY + T + LI E+ G + L
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 103
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 103
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 99
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 519 ELKNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQG 573
E K R+++ D + +GKG FG VY + + +A+K+L + V+
Sbjct: 2 ESKKRQWALEDF-----EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 56
Query: 574 YKQFQAEVQYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ + E+Q + H N+ L GY + T + LI E+ G + L
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 103
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
N+ L GY + T + LI E+ G + L
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYREL 100
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Query: 530 VAKITNNFEKVI---GKGGFGTVYHGYLEFNGTQVAVKML---SASSVQGYKQFQAEVQ- 582
+ KI N K++ G GG TVY +VA+K + + K+F+ EV
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 583 -YIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQGS 641
+ H+N+ +++ +ED L+ E++ L E++ L+ + + + G
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 642 HSAFD 646
A D
Sbjct: 125 KHAHD 129
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I ++H+N+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + +A+K+L + V+ + + E+Q + H
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 97
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 104
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
N+ L GY + T + LI E+ G + L
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 105
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ-----VAVKMLSASSVQGYKQ-FQAEVQYIVH--- 586
F K +G G FG V G + VAVKML +++ K+ +E++ + H
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNL--------EEHLSGANTLTWEAR--LRIATE 636
H+N+ L+G C + +I E+ G+L E L + E R L +++
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 637 AAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
AQG + C + + + ++ K+ F + ++
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 209
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ-----VAVKMLSASSVQGYKQ-FQAEVQYIVH--- 586
F K +G G FG V G + VAVKML +++ K+ +E++ + H
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNL--------EEHLSGANTLTWEAR--LRIATE 636
H+N+ L+G C + +I E+ G+L E L + E R L +++
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 637 AAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
AQG + C + + + ++ K+ F + ++
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 201
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHH 587
+FE + +GKG FG VY + + +A+K+L + V+ + + E+Q + H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
N+ L GY + T + LI E+ G + L
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 17/106 (16%)
Query: 523 RKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQ----VAVKMLSASSVQGYKQFQ 578
R F +++ K+ KV+G G FGTV+ G G V +K++ S G + FQ
Sbjct: 26 RIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQ 78
Query: 579 AEVQYI-----VHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
A ++ + H ++ L+G C +++ L+ +++ G+L +H+
Sbjct: 79 AVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHV 123
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I ++H+N+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNG----TQVAVKMLSASS-VQGYKQFQAEVQYI--VHHKNLT 591
KV+G G FGTVY G G VA+K+L+ ++ + +F E + + H +L
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + L+ + M G L E++
Sbjct: 104 RLLGVCLSPT-IQLVTQLMPHGCLLEYV 130
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 32/119 (26%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQG-YKQFQAEVQYIVHHKNLTTLVGYC 597
+ +GKG +G V+ G ++G VAVK+ S+ Q +++ + ++ H N+ +G+
Sbjct: 14 ECVGKGRYGEVWRGL--WHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNI---LGFI 68
Query: 598 DEDT----------------NMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
D G +Y+F+ + LE HL+ LR+A AA G
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----------LRLAVSAACG 117
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHHKNLTTL 593
+ +GKG FG VY + +A+K+L + V+ + + E+Q + H N+ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHLS 620
GY + T + LI E+ G + L
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQ 104
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKML-----SASSVQGYKQFQAEVQYIVHHKNLTTL 593
+ +GKG FG VY + +A+K+L + V+ + + E+Q + H N+ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHLS 620
GY + T + LI E+ G + L
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQ 104
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNG----TQVAVKMLSASS-VQGYKQFQAEVQYI--VHHKNLT 591
KV+G G FGTVY G G VA+K+L+ ++ + +F E + + H +L
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + L+ + M G L E++
Sbjct: 81 RLLGVCLSPT-IQLVTQLMPHGCLLEYV 107
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 540 VIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV 581
++GKGGFGTV+ G+ + QVA+K++ + V G+ V
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSV 79
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 17/106 (16%)
Query: 523 RKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQ----VAVKMLSASSVQGYKQFQ 578
R F +++ K+ KV+G G FGTV+ G G V +K++ S G + FQ
Sbjct: 8 RIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQ 60
Query: 579 AEVQYI-----VHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
A ++ + H ++ L+G C +++ L+ +++ G+L +H+
Sbjct: 61 AVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHV 105
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE--VQYIVH 586
++ + + EK +G G FG V+ T+VAVK + S+ + F AE V +
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQ 68
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
H L L ++ + +I EFMAKG+L + L
Sbjct: 69 HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFL 100
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 161
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 146
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ-----VAVKMLSASSVQGYKQ-FQAEVQYIVH--- 586
F K +G G FG V G + VAVKML +++ K+ +E++ + H
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNL 615
H+N+ L+G C + +I E+ G+L
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDL 122
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 171
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 539 KVIGKGGFGTVYHG---YLEFNGTQ--VAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHLSG--------------ANTLTWEARLRIA 634
+ L+G C + + +I EF GNL +L + LT E + +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 635 TEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+ A+G + + + KN+VK+ F + ++
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 23/165 (13%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ-----VAVKMLSASSVQGYKQ-FQAEVQYIVH--- 586
F K +G G FG V G + VAVKML +++ K+ +E++ + H
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS--------------GANTLTWEARLR 632
H+N+ L+G C + +I E+ G+L L +TL+ L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 633 IATEAAQGSHSAFDQGCCPHICESSSSSNPHKNIVKLITFSIIKN 677
+++ AQG + C + + + ++ K+ F + ++
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 213
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI--VHHKNLTTLVGYCD 598
+G G FG V+ + G K ++ + E+ + +HH L L +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 599 EDTNMGLIYEFMAKGNLEEHLSGANTLTWEAR----LRIATEAAQ--GSHSAFDQGCCPH 652
+ M LI EF++ G L + ++ + EA +R A E + HS P
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPE 178
Query: 653 --ICESSSSSNPHKNIVKLITFSI 674
+CE+ +S+ VK+I F +
Sbjct: 179 NIMCETKKASS-----VKIIDFGL 197
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ-----VAVKMLSASSVQGYKQ-FQAEVQYIVH--- 586
F K +G G FG V G + VAVKML +++ K+ +E++ + H
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNL 615
H+N+ L+G C + +I E+ G+L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ EK+IG G G V +G L G + VA+K L A + ++ +A + H N
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G ++ E+M G+L+ L
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 181
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ EK+IG G G V +G L G + VA+K L A + ++ +A + H N
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G ++ E+M G+L+ L
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ-----VAVKMLSASSVQGYKQ-FQAEVQYIVH--- 586
F K +G G FG V G + VAVKML +++ K+ +E++ + H
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNL 615
H+N+ L+G C + +I E+ G+L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 16/103 (15%)
Query: 541 IGKGGFGTV----YHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQ--------YIVHHK 588
+GKG FG+V Y + G VAVK L S + FQ E+Q +IV ++
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 589 NLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL 631
V Y + L+ E++ G L + L +RL
Sbjct: 75 G----VSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRL 113
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE--VQYIVH 586
++ + + EK +G G FG V+ T+VAVK + S+ + F AE V +
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQ 235
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
H L L ++ + +I EFMAKG+L + L
Sbjct: 236 HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFL 267
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E+M G+L+ L
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFL 108
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 539 KVIGKGGFGTVYHGY---LEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHL 619
+ L+G C + + +I EF GNL +L
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 539 KVIGKGGFGTVYHG---YLEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHL 619
+ L+G C + + +I EF GNL +L
Sbjct: 88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 36 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 95
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E+M G+L+ L
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFL 125
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 539 KVIGKGGFGTVYHGY---LEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHL 619
+ L+G C + + +I EF GNL +L
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK---QFQAEVQ--YIVHHKNLTTLVG 595
+G G FG V G E G +VAVK+L+ ++ + + E+Q + H ++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 596 YCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
+++ ++ E+++ G L +++ L + R+ + G
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSG 128
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQF-QAEVQYIVHHKNLTT 592
K IGKG F V G +VA+K+ L+ +S+Q K F + + I++H N+
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ--KLFREVRIMKILNHPNIVK 78
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTW-EAR--LRIATEAAQGSHS 643
L + + + LI E+ + G + ++L + EAR R A Q H
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 539 KVIGKGGFGTVYHG---YLEFNGT--QVAVKMLSASSVQG-YKQFQAEVQYIVH---HKN 589
K +G+G FG V ++ T VAVKML + ++ +E++ ++H H N
Sbjct: 26 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 85
Query: 590 LTTLVGYCDEDTN-MGLIYEFMAKGNLEEHL 619
+ L+G C + + +I EF GNL +L
Sbjct: 86 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E+M G+L+ L
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E+M G+L+ L
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E+M G+L+ L
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 539 KVIGKGGFG-----TVYHGYLEFNGTQVAVKMLSA-SSVQGYKQFQAEVQYI--VHHKNL 590
K +G+G FG T +H T VAVKML +S + +E + V+H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L G C +D + LI E+ G+L L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE--VQYIVH 586
++ + + EK +G G FG V+ T+VAVK + S+ + F AE V +
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQ 241
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
H L L ++ + +I EFMAKG+L + L
Sbjct: 242 HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFL 273
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E+M G+L+ L
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E+M G+L+ L
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E+M G+L+ L
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 46 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 105
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E+M G+L+ L
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSLDSFL 135
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 539 KVIGKGGFG-----TVYHGYLEFNGTQVAVKMLSA-SSVQGYKQFQAEVQYI--VHHKNL 590
K +G+G FG T +H T VAVKML +S + +E + V+H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L G C +D + LI E+ G+L L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E+M G+L+ L
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQF-QAEVQYIVHHKNLTT 592
K IGKG F V G +VA+K+ L+ +S+Q K F + + I++H N+
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ--KLFREVRIMKILNHPNIVK 75
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTW-EAR--LRIATEAAQGSHS 643
L + + + LI E+ + G + ++L + EAR R A Q H
Sbjct: 76 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 539 KVIGKGGFG-----TVYHGYLEFNGTQVAVKMLSA-SSVQGYKQFQAEVQYI--VHHKNL 590
K +G+G FG T +H T VAVKML +S + +E + V+H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L G C +D + LI E+ G+L L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 541 IGKGGFGTV----YHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQ--------YIVHHK 588
+GKG FG+V Y + G VAVK L S + FQ E+Q +IV ++
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 589 NLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL 631
V Y ++ L+ E++ G L + L +RL
Sbjct: 78 G----VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 116
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 66 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 104
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 541 IGKGGFGTV----YHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQ--------YIVHHK 588
+GKG FG+V Y + G VAVK L S + FQ E+Q +IV ++
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 589 NLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL 631
V Y ++ L+ E++ G L + L +RL
Sbjct: 79 G----VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 117
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 81 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 81 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 82 RLLGICLTST-VQLIMQLMPFGXLLDYV 108
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 75 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 541 IGKGGFGTVYHGYL-----EFNGTQVAVKML-SASSVQGYKQFQAEVQYI--VHHKNLTT 592
+G G FG VY G + + + QVAVK L S Q F E I +H+N+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL-------SGANTLTWEARLRIATEAAQGSH 642
+G + ++ E MA G+L+ L S ++L L +A + A G
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 74 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKM--LSASSVQGYKQFQAEVQYI--VHHKNLTTLV 594
++IGKG FG VYHG ++G +VA+++ + + K F+ EV H+N+ +
Sbjct: 39 ELIGKGRFGQVYHG--RWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 595 GYCDEDTNMGLI 606
G C ++ +I
Sbjct: 96 GACMSPPHLAII 107
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 68 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 71 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 109
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 72 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 110
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 541 IGKGGFGTV----YHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQ--------YIVHHK 588
+GKG FG+V Y + G VAVK L S + FQ E+Q +IV ++
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 589 NLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARL 631
V Y ++ L+ E++ G L + L +RL
Sbjct: 91 G----VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 129
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 85 RLLGICLTST-VQLIMQLMPFGCLLDYV 111
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 68 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 74 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 85 RLLGICLTST-VQLIMQLMPFGCLLDYV 111
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 82 RLLGICLTST-VQLIMQLMPFGCLLDYV 108
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 75 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 83 RLLGICLTST-VQLIMQLMPFGCLLDYV 109
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYL-----EFNGTQVAVKMLS-ASSVQGYKQFQAEV- 581
+VA+ + +G+G FG VY G + T+VA+K ++ A+S++ +F E
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 582 ---QYIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
++ HH + L+G + +I E M +G+L+ +L
Sbjct: 103 VMKEFNCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYL 141
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 83 RLLGICLTST-VQLIMQLMPFGCLLDYV 109
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 83 RLLGICLTST-VQLIMQLMPFGCLLDYV 109
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 84 RLLGICLTST-VQLIMQLMPFGCLLDYV 110
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 81 RLLGICLTST-VQLIMQLMPFGCLLDYV 107
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 115 RLLGICLTST-VQLITQLMPFGCLLDYV 141
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 81 RLLGICLTST-VQLITQLMPFGXLLDYV 107
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 537 FEKVIGKGGFGTVYHG-------YLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHH 587
F + +G+G F ++ G Y + + T+V +K+L + + F A + + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL-SGANTLTWEARLRIATEAAQGSH 642
K+L G C L+ EF+ G+L+ +L N + +L +A + A H
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMH 127
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQ----VAVKMLSA-SSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G +G VA+K+L +S + K+ +A V V ++
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + L+ + M G L +H+
Sbjct: 83 RLLGICLTST-VQLVTQLMPYGCLLDHV 109
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 536 NFEKVIGKGGFGTVY----HGYLEFNGTQ-VAVKMLSASS-VQGYKQFQAEVQ---YIVH 586
+F K +G G FG V +G ++ + VAVKML S+ + + +E++ Y+ +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNL 615
H N+ L+G C +I E+ G+L
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDL 130
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 91 RLLGICLTST-VQLITQLMPFGCLLDYV 117
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 536 NFEKVIGKGGFGTVY----HGYLEFNGTQ-VAVKMLSASS-VQGYKQFQAEVQ---YIVH 586
+F K +G G FG V +G ++ + VAVKML S+ + + +E++ Y+ +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNL 615
H N+ L+G C +I E+ G+L
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDL 114
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 75 RLLGICLTST-VQLITQLMPFGCLLDYV 101
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 81 RLLGICLTST-VQLITQLMPFGCLLDYV 107
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 83 RLLGICLTST-VQLITQLMPFGCLLDYV 109
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 83 RLLGICLTST-VQLITQLMPFGCLLDYV 109
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 536 NFEKVIGKGGFGTVY----HGYLEFNGTQ-VAVKMLSASS-VQGYKQFQAEVQ---YIVH 586
+F K +G G FG V +G ++ + VAVKML S+ + + +E++ Y+ +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNL 615
H N+ L+G C +I E+ G+L
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDL 132
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQY-IVHHKNLTTLVGYC 597
++IG+G +G VY G L + VAVK+ S ++ Q + + + ++ H N+ +
Sbjct: 19 ELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGD 76
Query: 598 DEDTNMG-----LIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
+ T G L+ E+ G+L ++LS +T W + R+A +G
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLS-LHTSDWVSSCRLAHSVTRG 123
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 81 RLLGICLTST-VQLITQLMPFGCLLDYV 107
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 84 RLLGICLTST-VQLITQLMPFGCLLDYV 110
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E M G+L+ L
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFL 108
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQ----VAVKML-SASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G + VA+K L A+S + K+ +A V V + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 88 RLLGICLTST-VQLITQLMPFGCLLDYV 114
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 536 NFEKVIGKGGFGTVY----HGYLEFNGTQ-VAVKMLSASS-VQGYKQFQAEVQ---YIVH 586
+F K +G G FG V +G ++ + VAVKML S+ + + +E++ Y+ +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNL 615
H N+ L+G C +I E+ G+L
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDL 137
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQ----VAVKML-SASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G + VA+K L A+S + K+ +A V V + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 84 RLLGICLTST-VQLITQLMPFGCLLDYV 110
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 88 RLLGICLTST-VQLITQLMPFGCLLDYV 114
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 84 RLLGICLTST-VQLITQLMPFGCLLDYV 110
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 78 RLLGICLTST-VQLITQLMPFGCLLDYV 104
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 106 RLLGICLTST-VQLITQLMPFGCLLDYV 132
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQ----VAVKML-SASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G + VA+K L A+S + K+ +A V V + ++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 87 RLLGICLTST-VQLITQLMPFGCLLDYV 113
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQ----VAVKML-SASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+G G FGTVY G G + VA+K L A+S + K+ +A V V + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 81 RLLGICLTST-VQLITQLMPFGCLLDYV 107
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 522 NRKFSYSDVAKITN-NFEKVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYK 575
N K S +D A I N K +G+G FG V Y G +VA+K+ L+ S +QG
Sbjct: 2 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG-- 59
Query: 576 QFQAEVQY--IVHHKNLTTLVGYCDEDTNMGLIYEF 609
+ + E+ Y ++ H ++ L + ++ E+
Sbjct: 60 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 95
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 522 NRKFSYSDVAKITN-NFEKVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYK 575
N K S +D A I N K +G+G FG V Y G +VA+K+ L+ S +QG
Sbjct: 1 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG-- 58
Query: 576 QFQAEVQY--IVHHKNLTTLVGYCDEDTNMGLIYEF 609
+ + E+ Y ++ H ++ L + ++ E+
Sbjct: 59 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSAS--------SVQGYKQFQAEVQYIVHHKNL 590
+VIGKG F V G Q AVK++ + S + K+ +A + +++ H ++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR-EASICHMLKHPHI 88
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNL 615
L+ D + +++EFM +L
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADL 113
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 536 NFEKVIGKGGFGTVY----HGYLEFNGTQ-VAVKMLSASS-VQGYKQFQAEVQ---YIVH 586
+F K +G G FG V +G ++ + VAVKML S+ + + +E++ Y+ +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNL 615
H N+ L+G C +I E+ G+L
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDL 137
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E M G+L+ L
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 537 FEKVIGKGGFGTVYHG-------YLEFNGTQVAVKMLSASSVQGYKQF--QAEVQYIVHH 587
F + +G+G F ++ G Y + + T+V +K+L + + F A + + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL-SGANTLTWEARLRIATEAAQGSH 642
K+L G C L+ EF+ G+L+ +L N + +L +A + A H
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMH 127
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQ---VAVKMLSASSVQGYKQ---FQAEVQYIVHHKN 589
+ +KV+G G FG V G L+ + VA+K L + ++ +A + H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 590 LTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ L G + + ++ E M G+L+ L
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 541 IGKGGFGTVYHGYLE--FNG---TQVAVKMLSAS-SVQGYKQFQAEVQ----YIVHHKNL 590
+G+G FG VY G G T+VAVK ++ S S++ +F E + HH +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--V 82
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLS----------GANTLTWEARLRIATEAAQG 640
L+G + ++ E MA G+L+ +L G T + +++A E A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIV--HHKNLTTLVGYCD 598
+G G FG VY + A K++ S + + + E+ + H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 599 EDTNMGLIYEFMAKGNLE 616
+ N+ ++ EF A G ++
Sbjct: 105 YENNLWILIEFCAGGAVD 122
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 541 IGKGGFGTVYHGYLE--FNG---TQVAVKMLSAS-SVQGYKQFQAEVQ----YIVHHKNL 590
+G+G FG VY G G T+VAVK ++ S S++ +F E + HH +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--V 82
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLS----------GANTLTWEARLRIATEAAQG 640
L+G + ++ E MA G+L+ +L G T + +++A E A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIV--HHKNLTTLVGYCD 598
+G G FG VY + A K++ S + + + E+ + H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 599 EDTNMGLIYEFMAKGNLE 616
+ N+ ++ EF A G ++
Sbjct: 105 YENNLWILIEFCAGGAVD 122
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIV--HHKNLTTLVGYCD 598
+G G FG VY + A K++ S + + + E+ + H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 599 EDTNMGLIYEFMAKGNLE 616
+ N+ ++ EF A G ++
Sbjct: 105 YENNLWILIEFCAGGAVD 122
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 10/151 (6%)
Query: 535 NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE------VQYIVH 586
+NFE +V+GKG FG V ++ G AVK+L + + + +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 587 HKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRI-ATEAAQGSHSAF 645
H LT L + + EF+ G+L H+ + EAR R A E
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD-EARARFYAAEIISALMFLH 141
Query: 646 DQGCCPHICESSSSSNPHKNIVKLITFSIIK 676
D+G + + H+ KL F + K
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 541 IGKGGFGTVYHGYLE--FNG---TQVAVKMLSAS-SVQGYKQFQAEVQ----YIVHHKNL 590
+G+G FG VY G G T+VAVK ++ S S++ +F E + HH +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--V 79
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLS----------GANTLTWEARLRIATEAAQG 640
L+G + ++ E MA G+L+ +L G T + +++A E A G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 541 IGKGGFGTVYHGYLE--FNG---TQVAVKMLSAS-SVQGYKQFQAEVQ----YIVHHKNL 590
+G+G FG VY G G T+VAVK ++ S S++ +F E + HH +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--V 82
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLS----------GANTLTWEARLRIATEAAQG 640
L+G + ++ E MA G+L+ +L G T + +++A E A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 541 IGKGGFGTVYHGYLE--FNG---TQVAVKMLSAS-SVQGYKQFQAEVQ----YIVHHKNL 590
+G+G FG VY G G T+VAVK ++ S S++ +F E + HH +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--V 82
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLS----------GANTLTWEARLRIATEAAQG 640
L+G + ++ E MA G+L+ +L G T + +++A E A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 541 IGKGGFGTVYHGYLE--FNG---TQVAVKMLSAS-SVQGYKQFQAEVQ----YIVHHKNL 590
+G+G FG VY G G T+VAVK ++ S S++ +F E + HH +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--V 82
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLS----------GANTLTWEARLRIATEAAQG 640
L+G + ++ E MA G+L+ +L G T + +++A E A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 541 IGKGGFGTVYHGYLE--FNG---TQVAVKMLSAS-SVQGYKQFQAEVQ----YIVHHKNL 590
+G+G FG VY G G T+VAVK ++ S S++ +F E + HH +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--V 83
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLS----------GANTLTWEARLRIATEAAQG 640
L+G + ++ E MA G+L+ +L G T + +++A E A G
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 589 NLTTLVGYCDEDTNMGLIYEFMA 611
N+ L+ + + L++EF++
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLS 88
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 589 NLTTLVGYCDEDTNMGLIYEFMA 611
N+ L+ + + L++EF++
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLS 88
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI---VHHKNLTTLVG 595
+++G G +G VY G G A+K++ + + ++ + E+ + HH+N+ T G
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYG 88
Query: 596 YCDE------DTNMGLIYEFMAKGNLEEHL--SGANTLTWEARLRIATEAAQG 640
+ D + L+ EF G++ + + + NTL E I E +G
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 525 FSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI 584
S D K FEK IG+G GTVY G +VA++ ++ + E+ +
Sbjct: 13 VSVGDPKKKYTRFEK-IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 585 VHHKNLTTLVGYCDE---DTNMGLIYEFMAKGNL 615
+KN +V Y D + ++ E++A G+L
Sbjct: 72 RENKN-PNIVNYLDSYLVGDELWVVMEYLAGGSL 104
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 540 VIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVH--HKNLTTLVGYC 597
V+GKG +G VY G N ++A+K + + + E+ H HKN+ +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 598 DEDTNMGLIYEFMAKGNL 615
E+ + + E + G+L
Sbjct: 89 SENGFIKIFMEQVPGGSL 106
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 525 FSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI 584
S D K FEK IG+G GTVY G +VA++ ++ + E+ +
Sbjct: 13 VSVGDPKKKYTRFEK-IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 585 VHHKNLTTLVGYCDE---DTNMGLIYEFMAKGNL 615
+KN +V Y D + ++ E++A G+L
Sbjct: 72 RENKN-PNIVNYLDSYLVGDELWVVMEYLAGGSL 104
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 525 FSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI 584
S D K FEK IG+G GTVY G +VA++ ++ + E+ +
Sbjct: 14 VSVGDPKKKYTRFEK-IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 585 VHHKNLTTLVGYCDE---DTNMGLIYEFMAKGNL 615
+KN +V Y D + ++ E++A G+L
Sbjct: 73 RENKN-PNIVNYLDSYLVGDELWVVMEYLAGGSL 105
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIV--HHKNLTTLVGYCD 598
+G G FG VY + G A K++ S + + + E++ + H + L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 599 EDTNMGLIYEFMAKGNLE 616
D + ++ EF G ++
Sbjct: 87 HDGKLWIMIEFCPGGAVD 104
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 541 IGKGGFGTVYHGYLE--FNG---TQVAVKMLSAS-SVQGYKQFQAEVQ----YIVHHKNL 590
+G+G FG VY G G T+VAVK ++ S S++ +F E + HH +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--V 81
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLS----------GANTLTWEARLRIATEAAQG 640
L+G + ++ E MA G+L+ +L G T + +++A E A G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSAS--------SVQGYKQFQAEVQYIVHHKNL 590
+VIGKG F V G Q AVK++ + S + K+ +A + +++ H ++
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR-EASICHMLKHPHI 88
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNL 615
L+ D + +++EFM +L
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADL 113
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIV--HHKNLTTLVGYCD 598
+G G FG VY + G A K++ S + + + E++ + H + L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 599 EDTNMGLIYEFMAKGNLE 616
D + ++ EF G ++
Sbjct: 79 HDGKLWIMIEFCPGGAVD 96
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 589 NLTTLVGYCDEDTNMGLIYEFMA 611
N+ L+ + + L++EF++
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLS 87
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 525 FSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI 584
S D K FEK IG+G GTVY G +VA++ ++ + E+ +
Sbjct: 14 VSVGDPKKKYTRFEK-IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 585 VHHKNLTTLVGYCDE---DTNMGLIYEFMAKGNL 615
+KN +V Y D + ++ E++A G+L
Sbjct: 73 RENKN-PNIVNYLDSYLVGDELWVVMEYLAGGSL 105
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 525 FSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI 584
S D K FEK IG+G GTVY G +VA++ ++ + E+ +
Sbjct: 13 VSVGDPKKKYTRFEK-IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 585 VHHKNLTTLVGYCDE---DTNMGLIYEFMAKGNL 615
+KN +V Y D + ++ E++A G+L
Sbjct: 72 RENKN-PNIVNYLDSYLVGDELWVVMEYLAGGSL 104
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 589 NLTTLVGYCDEDTNMGLIYEFMA 611
N+ L+ + + L++EF++
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLS 86
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSAS--------SVQGYKQFQAEVQYIVHHKNL 590
+VIGKG F V G Q AVK++ + S + K+ +A + +++ H ++
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR-EASICHMLKHPHI 90
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNL 615
L+ D + +++EFM +L
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADL 115
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 16 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--KAFKNRELQ 65
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 66 IMRKLDHCNIVRL 78
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNLTTLVGY 596
KVIG G FG V+ L +VA+K + + +K + ++ IV H N+ L +
Sbjct: 46 KVIGNGSFGVVFQAKL-VESDEVAIKKVLQD--KRFKNRELQIMRIVKHPNVVDLKAF 100
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL 88
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF---QAEVQYIVHHKNLTTLVGYC 597
+G G + TVY G + G VA+K + S +G + + + H+N+ L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 598 DEDTNMGLIYEFM 610
+ + L++EFM
Sbjct: 73 HTENKLTLVFEFM 85
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 16 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--KAFKNRELQ 65
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 66 IMRKLDHCNIVRL 78
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 16 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--KAFKNRELQ 65
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 66 IMRKLDHCNIVRL 78
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 532 KITNNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIV 585
+ NF+KV IG+G +G VY + G VA+K + + V + + +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFM 610
+H N+ L+ + + L++EF+
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFL 91
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 532 KITNNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIV 585
+ NF+KV IG+G +G VY + G VA+K + + V + + +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFM 610
+H N+ L+ + + L++EF+
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFL 91
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL 87
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL 86
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL 86
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL 86
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI--VHHKNLTTLVGY 596
+++G G FG V+ G ++A K++ ++ ++ + E+ + + H NL L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 597 CDEDTNMGLIYEFMAKGNL 615
+ ++ L+ E++ G L
Sbjct: 155 FESKNDIVLVMEYVDGGEL 173
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL 87
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 540 VIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVH--HKNLTTLVGYC 597
V+GKG +G VY G N ++A+K + + + E+ H HKN+ +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 598 DEDTNMGLIYEFMAKGNL 615
E+ + + E + G+L
Sbjct: 75 SENGFIKIFMEQVPGGSL 92
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL 85
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL 85
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL 85
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL 87
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL 88
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 536 NFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI-----VHHKNL 590
EK IG+G F VY +G VA+K + + K ++ I ++H N+
Sbjct: 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV 94
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNL 615
ED + ++ E G+L
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDL 119
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL 85
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 538 EKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQ-AEVQYIVHHKNLTTLVGY 596
E++ G+G FGTV G + G VA+K + ++ Q + ++HH N+ L Y
Sbjct: 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSY 87
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 28 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 77
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 78 IMRKLDHCNIVRL 90
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 540 VIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK-------QFQAEVQYIVHHKNLTT 592
++GKG F VY G +VA+KM+ ++ YK Q + ++ + H ++
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM--YKAGMVQRVQNEVKIHCQLKHPSILE 75
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L Y ++ + L+ E G + +L
Sbjct: 76 LYNYFEDSNYVYLVLEMCHNGEMNRYL 102
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 24 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 73
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 74 IMRKLDHCNIVRL 86
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 50 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 99
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 100 IMRKLDHCNIVRL 112
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 35 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 84
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 85 IMRKLDHCNIVRL 97
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQ----VAVKML-SASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+ G FGTVY G G + VA+K L A+S + K+ +A V V + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 88 RLLGICLTST-VQLIMQLMPFGCLLDYV 114
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 29 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 78
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 79 IMRKLDHCNIVRL 91
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 50 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 99
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 100 IMRKLDHCNIVRL 112
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 17 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 66
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 67 IMRKLDHCNIVRL 79
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 44 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 93
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 94 IMRKLDHCNIVRL 106
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 21 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 70
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 71 IMRKLDHCNIVRL 83
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 54 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 103
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 104 IMRKLDHCNIVRL 116
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 52 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 101
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 102 IMRKLDHCNIVRL 114
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 28 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 77
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 78 IMRKLDHCNIVRL 90
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 16 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 65
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 66 IMRKLDHCNIVRL 78
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 16 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 65
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 66 IMRKLDHCNIVRL 78
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 16 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 65
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 66 IMRKLDHCNIVRL 78
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 16 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 65
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 66 IMRKLDHCNIVRL 78
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 535 NNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHKNL 590
EKV G+G +G VY + G VA+K + + + + + +HH N+
Sbjct: 24 QKLEKV-GEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRI 633
+L+ + + L++EFM K +L++ L T +++++I
Sbjct: 82 VSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKI 123
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 20 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 69
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 70 IMRKLDHCNIVRL 82
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 535 NNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHKNL 590
EKV G+G +G VY + G VA+K + + + + + +HH N+
Sbjct: 24 QKLEKV-GEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 591 TTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRI 633
+L+ + + L++EFM K +L++ L T +++++I
Sbjct: 82 VSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKI 123
>pdb|3LKK|A Chain A, Crystal Structure Of The Isopentenyl Phosphate Kinase
Substr Complex
pdb|3LKK|B Chain B, Crystal Structure Of The Isopentenyl Phosphate Kinase
Substr Complex
Length = 249
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 24/104 (23%)
Query: 71 SSGDVKFLIRARFMYGNYDGQNIIPSFSLLLEADVWDSVNLKDASGIVTKEIIHAPKKNY 130
S GDV I+ YG Y G +I+ + LL+ DV +V L D GI +K+ PK+N
Sbjct: 130 SYGDV--YIKDEHSYGIYSGDDIMADMAELLKPDV--AVFLTDVDGIYSKD----PKRNP 181
Query: 131 MYVCL---------------VNTGSGTPFISALELR-PLKNSTY 158
V L V G G F S ++++ +KN Y
Sbjct: 182 DAVLLRDIDTNITFDRVQNDVTGGIGKKFESMVKMKSSVKNGVY 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAE 580
+ ++ SY+D KVIG G FG VY L +G VA+K + + +K + +
Sbjct: 95 RPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ 144
Query: 581 VQYIVHHKNLTTL 593
+ + H N+ L
Sbjct: 145 IMRKLDHCNIVRL 157
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNL 590
+ FE++ IG G FG V G A+K+L V KQ + + + I+ N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 591 TTLVGY---CDEDTNMGLIYEFMAKGNLEEHL 619
LV +++N+ ++ E+M G++ HL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL 132
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV-----KMLSASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+ G FGTVY G G +V + ++ A+S + K+ +A V V + ++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 81 RLLGICLTST-VQLITQLMPFGCLLDYV 107
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV---KMLSASSVQGYKQFQAEVQYI--VHHKNLTTL 593
+V+G+GGFG V+ ++ G A +GY+ E + + VH + + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ T++ L+ M G++ H+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHI 276
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNL 590
+ FE++ IG G FG V G A+K+L V KQ + + + I+ N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 591 TTLVGY---CDEDTNMGLIYEFMAKGNLEEHL 619
LV +++N+ ++ E+M G++ HL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL 132
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQ----VAVKML-SASSVQGYKQF--QAEVQYIVHHKNLT 591
KV+ G FGTVY G G + VA+K L A+S + K+ +A V V + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L+G C T + LI + M G L +++
Sbjct: 88 RLLGICLTST-VQLITQLMPFGCLLDYV 114
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV---KMLSASSVQGYKQFQAEVQYI--VHHKNLTTL 593
+V+G+GGFG V+ ++ G A +GY+ E + + VH + + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ T++ L+ M G++ H+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHI 276
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV---KMLSASSVQGYKQFQAEVQYI--VHHKNLTTL 593
+V+G+GGFG V+ ++ G A +GY+ E + + VH + + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ T++ L+ M G++ H+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHI 276
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAV---KMLSASSVQGYKQFQAEVQYI--VHHKNLTTL 593
+V+G+GGFG V+ ++ G A +GY+ E + + VH + + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHL 619
+ T++ L+ M G++ H+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHI 276
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 538 EKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQA---EVQYI--VHHKNLTT 592
++V+GKG FG V + G + AVK++S V+ ++ EVQ + + H N+
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
L + ++ L+ E G L + + + RI + G
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 144
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 538 EKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQA---EVQYI--VHHKNLTT 592
++V+GKG FG V + G + AVK++S V+ ++ EVQ + + H N+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
L + ++ L+ E G L + + + RI + G
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 94 EFSFKDNSNLYMVMEYVAGGEMFSHL 119
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 540 VIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQ-----------YIVHHK 588
VIG+G V G + AVK++ ++ + + EV+ + H
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 589 NLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLT 626
++ TL+ + + M L+++ M KG L ++L+ L+
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALS 198
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNLTTLVGYCD 598
KVIGKG FG V Y VA+KM+ + + ++Q E++ + H + D
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQ-------D 154
Query: 599 EDTNMGLIY 607
+D M +I+
Sbjct: 155 KDNTMNVIH 163
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 403 LTSLQALDLSNNSLTGSVPE-FLSELHFLRVLNLTGNNLEGSVPAGLLER 451
LT+L LDL NN L S+PE +L L+ L+L N L+ SVP G+ +R
Sbjct: 156 LTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQLK-SVPDGVFDR 203
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS K FQ+ I+H K L+ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------KPFQS----IIHAKRTYRELRLLKHM 90
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 124
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 528 SDVAKITN-NFEKVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQFQAEV 581
+D A I N K +G+G FG V Y G +VA+K+ L+ S +QG + + E+
Sbjct: 2 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREI 59
Query: 582 QY--IVHHKNLTTLVGYCDEDTNMGLIYEF 609
Y ++ H ++ L + ++ E+
Sbjct: 60 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 89
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGEMFSHL 133
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 538 EKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQA---EVQYI--VHHKNLTT 592
++V+GKG FG V + G + AVK++S V+ ++ EVQ + + H N+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 593 LVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWEARLRIATEAAQG 640
L + ++ L+ E G L + + + RI + G
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 102 EFSFKDNSNLYMVMEYVAGGEMFSHL 127
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
IG G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 83
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 117
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK---QFQAEVQ--YIVHHKNLTTLVG 595
+G G FG V G + G +VAVK+L+ ++ + + E+Q + H ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 596 YCDEDTNMGLIYEFMAKGNLEEHLSGANTL-TWEAR 630
T+ ++ E+++ G L +++ + EAR
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR 114
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK---QFQAEVQ--YIVHHKNLTTLVG 595
+G G FG V G + G +VAVK+L+ ++ + + E+Q + H ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 596 YCDEDTNMGLIYEFMAKGNLEEHLSGANTL-TWEAR 630
T+ ++ E+++ G L +++ + EAR
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR 114
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNLTTLVGYCD 598
KVIGKG FG V Y VA+KM+ + + ++Q E++ + H + D
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQ-------D 154
Query: 599 EDTNMGLIY 607
+D M +I+
Sbjct: 155 KDNTMNVIH 163
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 530 VAKITNNFEKVIGKGGFGTVYHG-YLEFNGTQVAVKMLSA---SSVQGYKQFQAEVQYI- 584
+A+ +++G+G FG VY G Y G ++ V + + ++ ++F +E +
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 585 -VHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ H ++ L+G +E+ +I E G L +L
Sbjct: 81 NLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLE 116
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL 132
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V Y +G ++AVK LS + FQ+ I+H K L+ +
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 107
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLMGAD 141
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAV-KMLSASSVQGYKQFQA-EVQYI--VHHK 588
NF+KV IG+G +G VY + G VA+ K+ + +G E+ + ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL 84
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAV-KMLSASSVQGYKQFQA-EVQYI--VHHK 588
NF+KV IG+G +G VY + G VA+ K+ + +G E+ + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 589 NLTTLVGYCDEDTNMGLIYEFM 610
N+ L+ + + L++EF+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL 83
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQ-GYKQFQAEVQYI--VHHKNLTTL 593
F++ +G G FG V+ +G + +K ++ Q +Q +AE++ + + H N+ +
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 594 VGYCDEDTNMGLIYEFMAKGNLEEHLSGANT 624
++ NM ++ E G L E + A
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQA 116
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHL 153
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF-----QAEVQYIVHH 587
+ FE++ +G G FG V + G A+K+L V KQ + +Q V+
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 588 KNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHL 619
L L +++N+ ++ E+ G + HL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL 133
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQ 576
IG+G +G V Y N +VA+K +S Q Y Q
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQ 70
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNLTTLVGY 596
K +G G FG V + +G A+K+L V KQ + + + I+ N LV
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 597 ---CDEDTNMGLIYEFMAKGNLEEHL 619
+++N+ ++ E++A G + HL
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHL 153
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNLTTLVGYCD 598
KVIGKG FG V Y VA+KM+ + + ++Q E++ + H + D
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQ-------D 154
Query: 599 EDTNMGLIY 607
+D M +I+
Sbjct: 155 KDNTMNVIH 163
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 530 VAKITNNFEKVIGKGGFGTVYHG-YLEFNGTQVAVKMLSA---SSVQGYKQFQAEVQYI- 584
+A+ +++G+G FG VY G Y G ++ V + + ++ ++F +E +
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 585 -VHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ H ++ L+G +E+ +I E G L +L
Sbjct: 65 NLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLE 100
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 538 EKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQA---EVQYI--VHHKNLTT 592
++V+GKG FG V + G + AVK++S V+ ++ EVQ + + H N+
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 113
Query: 593 LVGYCDEDTNMGLIYEFMAKGNL 615
L + ++ L+ E G L
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGEL 136
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 530 VAKITNNFEKVIGKGGFGTVYHG-YLEFNGTQVAVKMLSA---SSVQGYKQFQAEVQYI- 584
+A+ +++G+G FG VY G Y G ++ V + + ++ ++F +E +
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 585 -VHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLS 620
+ H ++ L+G +E+ +I E G L +L
Sbjct: 69 NLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLE 104
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 538 EKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQA---EVQYI--VHHKNLTT 592
++V+GKG FG V + G + AVK++S V+ ++ EVQ + + H N+
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 114
Query: 593 LVGYCDEDTNMGLIYEFMAKGNL 615
L + ++ L+ E G L
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGEL 137
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 74
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 108
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 83
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 117
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 77
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 78 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 111
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 85
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 119
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 75
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 109
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 80
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 114
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 85
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 119
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 85
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 119
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 83
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 117
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 76
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 110
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 75
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 109
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 80
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 114
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 83
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 117
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 85
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 119
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 80
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 114
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 84
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 118
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 101
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 135
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 403 LTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGLLER 451
L +L LDLS L P + L L+VLN+ N L+ SVP G+ +R
Sbjct: 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK-SVPDGIFDR 516
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 90
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 124
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQFQAEVQY--IVHHKNLT 591
K +G+G FG V Y G +VA+K+ L+ S +QG + + E+ Y ++ H ++
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHII 67
Query: 592 TLVGYCDEDTNMGLIYEF 609
L + ++ E+
Sbjct: 68 KLYDVIKSKDEIIMVIEY 85
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 90
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 124
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 80
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 114
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 89
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 123
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 84
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 118
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 74
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 108
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYI--VHHKNLTTLV 594
F +V+G G F V+ G A+K + S + E+ + + H+N+ TL
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 595 GYCDEDTNMGLIYEFMAKGNL 615
+ T+ L+ + ++ G L
Sbjct: 73 DIYESTTHYYLVMQLVSGGEL 93
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 97
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 131
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 98
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 132
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 89
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 123
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 78
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 112
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 74
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 108
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 74
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 108
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 88
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 89 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 122
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 398 TYIFSLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGLLERAKNGLL 457
+ + L LQ + L L P L++LRVLN++GN L ++ + N L
Sbjct: 266 SMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT-TLEESVFHSVGN-LE 323
Query: 458 SLSVDGNPKLC 468
+L +D NP C
Sbjct: 324 TLILDSNPLAC 334
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 539 KVIGKGGFGTVYHGYLEFNGTQVAVKMLSAS---SVQGYKQFQAEVQYIVH---HKNLTT 592
K +GKG +G V+ G VAVK + + S + F+ E+ + H+N+
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVN 73
Query: 593 LVGY--CDEDTNMGLIYEFM 610
L+ D D ++ L++++M
Sbjct: 74 LLNVLRADNDRDVYLVFDYM 93
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 101
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 135
>pdb|3URM|A Chain A, Crystal Structure Of The Periplasmic Sugar Binding Protein
Chve
pdb|3URM|B Chain B, Crystal Structure Of The Periplasmic Sugar Binding Protein
Chve
pdb|3UUG|A Chain A, Crystal Structure Of The Periplasmic Sugar Binding Protein
Chve
pdb|3UUG|B Chain B, Crystal Structure Of The Periplasmic Sugar Binding Protein
Chve
Length = 330
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 89/238 (37%), Gaps = 30/238 (12%)
Query: 46 KTLERQFLNVRSFPEGIRNCYTLKPSSGDVKFLIRARFMYGNYDGQNIIPSFSLLLEADV 105
K Q + V ++ IRN SGDV + Y +D + +L +
Sbjct: 78 KQAGEQGIKVIAYDRLIRN-------SGDVSY-------YATFDNFQV----GVLQATSI 119
Query: 106 WDSVNLKDASGIVTKEIIH-APKKNYMYVCLVNTGSG-TPFISALELRPLKNSTYETQSG 163
D + LKD G E+ +P N + S P+I + +L +K+
Sbjct: 120 TDKLGLKDGKGPFNIELFGGSPDDNNAFFFYDGAMSVLKPYIDSGKLV-VKSGQMGMDKV 178
Query: 164 SLLLWDVGSTTSE-----AIRYPDDVYDRIWSPYRSLRWESITRRSDSTFFENDWQLPLT 218
L WD + + + Y D D + SPY L I+ + D LP+
Sbjct: 179 GTLRWDPATAQARMDNLLSAYYTDAKVDAVLSPYDGLSIGIISSLKGVGYGTKDQPLPVV 238
Query: 219 IMRTAVRPANASI---NSLSFYWKTSTPESQYYIFLHFAEVEGRQENQTREMSIYSNG 273
+ A P+ SI S +K + ++ + + A +EG+ E + + Y NG
Sbjct: 239 SGQDAEVPSVKSIIAGEQYSTIFKDTRELAKVTVNMVNAVMEGK-EPEVNDTKTYENG 295
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 84
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 118
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 97
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 131
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 98
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 132
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 98
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 132
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 22/94 (23%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEVQYIVHHKNL---TTLVGYC 597
+G G +G+V + G +VAVK LS + FQ+ I+H K L+ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLS-------RPFQS----IIHAKRTYRELRLLKHM 84
Query: 598 DEDTNMGLIYEFMAKGNLEE--------HLSGAN 623
+ +GL+ F +LEE HL GA+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 118
>pdb|3LL5|A Chain A, Crystal Structure Of T. Acidophilum Isopentenyl Phosphate
Ki Product Complex
pdb|3LL5|B Chain B, Crystal Structure Of T. Acidophilum Isopentenyl Phosphate
Ki Product Complex
pdb|3LL5|C Chain C, Crystal Structure Of T. Acidophilum Isopentenyl Phosphate
Ki Product Complex
pdb|3LL5|D Chain D, Crystal Structure Of T. Acidophilum Isopentenyl Phosphate
Ki Product Complex
Length = 249
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 71 SSGDVKFLIRARFMYGNYDGQNIIPSFSLLLEADVWDSVNLKDASGIVTKEIIHAPKKNY 130
S GDV I+ YG Y G +I + LL+ DV +V L D GI +K+ PK+N
Sbjct: 130 SYGDV--YIKDEHSYGIYSGDDIXADXAELLKPDV--AVFLTDVDGIYSKD----PKRNP 181
Query: 131 MYVCLVNTGSGTPF 144
V L + + F
Sbjct: 182 DAVLLRDIDTNITF 195
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 525 FSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQ---AEV 581
F D K+ ++ + IG G FG VY N VA+K +S S Q +++Q EV
Sbjct: 8 FFKDDPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEV 66
Query: 582 QYI--VHHKNLTTLVGYCDEDTNMGLIYEF 609
+++ + H N G + L+ E+
Sbjct: 67 RFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNL 590
+ FE++ +G G FG V + G A+K+L V KQ + + + I+ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 591 TTLVGY---CDEDTNMGLIYEFMAKGNLEEHL 619
LV +++N+ ++ E++ G + HL
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNL 590
+ FE++ +G G FG V + G A+K+L V KQ + + + I+ N
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 591 TTLVGY---CDEDTNMGLIYEFMAKGNLEEHL 619
LV +++N+ ++ E++ G + HL
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 125
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 541 IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK-QFQAEVQYI--VHHKNLTTLVGYC 597
+G+G + TVY G + VA+K + +G EV + + H N+ TL
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 598 DEDTNMGLIYEFMAKGNLEEHLS 620
+ ++ L++E++ K +L+++L
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLD 91
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNL 590
+ FE++ +G G FG V + G A+K+L V KQ + + + I+ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 591 TTLVGY---CDEDTNMGLIYEFMAKGNLEEHL 619
LV +++N+ ++ E++ G + HL
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNL 590
+ FE++ +G G FG V + G A+K+L V KQ + + + I+ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 591 TTLVGY---CDEDTNMGLIYEFMAKGNLEEHL 619
LV +++N+ ++ E++ G + HL
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNL 590
+ FE++ +G G FG V + G A+K+L V KQ + + + I+ N
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 591 TTLVGY---CDEDTNMGLIYEFMAKGNLEEHL 619
LV +++N+ ++ E++ G + HL
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 125
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 525 FSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQ---AEV 581
F D K+ ++ + IG G FG VY N VA+K +S S Q +++Q EV
Sbjct: 47 FFKDDPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEV 105
Query: 582 QYI--VHHKNLTTLVGYCDEDTNMGLIYEF 609
+++ + H N G + L+ E+
Sbjct: 106 RFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 401 FSLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGN 438
+SL SL+ LDLS+N L+ + L L+ LNL GN
Sbjct: 71 YSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGN 108
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 401 FSLTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGN 438
+SL SL+ LDLS+N L+ + L L+ LNL GN
Sbjct: 97 YSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGN 134
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 531 AKIT-NNFE--KVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQF-----QAEVQ 582
AK+T N+F+ K++GKG FG V + G A+K+L + + ++ V
Sbjct: 3 AKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 583 YIVHHKNLTTLVGYCDEDTNMGLIYEFMAKGNLEEHLSGANTLTWE 628
H LT L + + E+ G L HLS T E
Sbjct: 63 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 108
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 589 NLTTLVGYCDEDTNMGLIYE 608
N+ L+ + + L++E
Sbjct: 62 NIVKLLDVIHTENKLYLVFE 81
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 403 LTSLQALDLSNNSLTGSVPEFLSELHFLRVLNLTGNNLEGSVPAGLLERAKNGLLSLSVD 462
L ++ LDLS+NSLTG + LS L L LN+ NN+ P L ++ +++LS
Sbjct: 498 LRNVNHLDLSHNSLTGDSMDALSHLKGL-YLNMASNNIRIIPPHLLPALSQQSIINLS-- 554
Query: 463 GNPKLC 468
NP C
Sbjct: 555 HNPLDC 560
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASS----VQGYKQFQAEVQYIVHHK 588
NF+KV IG+G +G VY + G VA+K + + V + + ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 589 NLTTLVGYCDEDTNMGLIYE 608
N+ L+ + + L++E
Sbjct: 66 NIVKLLDVIHTENKLYLVFE 85
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNL 590
+ FE++ +G G FG V + G A+K+L V KQ + + + I+ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 591 TTLVGY---CDEDTNMGLIYEFMAKGNLEEHL 619
LV +++N+ ++ E++ G + HL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNL 590
+ FE++ +G G FG V + G A+K+L V KQ + + + I+ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 591 TTLVGY---CDEDTNMGLIYEFMAKGNLEEHL 619
LV +++N+ ++ E++ G + HL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNL 590
+ FE++ +G G FG V + G A+K+L V KQ + + + I+ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 591 TTLVGY---CDEDTNMGLIYEFMAKGNLEEHL 619
LV +++N+ ++ E++ G + HL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 537 FEKVIGKGGFGTVYHGYLEFNGTQVAVKM-----LSASSVQGYKQFQAEVQYIVHHKNLT 591
FE+ +GKG F V G + A K+ LSA Q ++ +A + ++ H N+
Sbjct: 27 FEE-LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIV 84
Query: 592 TLVGYCDEDTNMGLIYEFMAKGNLEE 617
L E+ + LI++ + G L E
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGELFE 110
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 535 NNFEKV--IGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYKQFQAEV--QYIVHHKNL 590
+ FE++ +G G FG V + G A+K+L V KQ + + + I+ N
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 591 TTLVGY---CDEDTNMGLIYEFMAKGNLEEHL 619
LV +++N+ ++ E++ G + HL
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 153
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 529 DVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLSASSVQGYK-QFQAEVQYI--V 585
D+ KI F++ +G G F V + G AVK + +++G + + E+ + +
Sbjct: 19 DIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 586 HHKNLTTLVGYCDEDTNMGLIYEFMAKGNL 615
H+N+ L + ++ L+ + ++ G L
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGEL 107
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 521 KNRKFSYSDVAKITNNFEKVIGKGGFGTVYHGYLEFNGTQVAVKMLS-ASSVQGYKQFQA 579
+N F D ++ EK IGKG FG V+ G VA+K++ + + Q
Sbjct: 16 ENLYFQSMDPEELFTKLEK-IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ 74
Query: 580 EVQYIVHHKN--LTTLVGYCDEDTNMGLIYEFMAKGN 614
E+ + + +T G +DT + +I E++ G+
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 111
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,669,750
Number of Sequences: 62578
Number of extensions: 792905
Number of successful extensions: 2670
Number of sequences better than 100.0: 615
Number of HSP's better than 100.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 459
Number of HSP's that attempted gapping in prelim test: 2304
Number of HSP's gapped (non-prelim): 711
length of query: 678
length of database: 14,973,337
effective HSP length: 105
effective length of query: 573
effective length of database: 8,402,647
effective search space: 4814716731
effective search space used: 4814716731
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)